locus-tag	class	description
CS348_00020	COG0187	DNA topoisomerase II activity
CS348_00035	COG0561	phosphatase activity
CS348_00055	COG2198	Histidine kinase
CS348_00055	COG0784	Response regulator, receiver
CS348_00055	COG2205	protein histidine kinase activity
CS348_00060	COG1879	ABC-type sugar transport system periplasmic component
CS348_00065	COG0745	RESPONSE REGULATOR receiver
CS348_00070	COG3005	denitrification pathway
CS348_00085	COG1858	cytochrome C peroxidase
CS348_00095	COG2386	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
CS348_00100	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
CS348_00105	COG3114	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
CS348_00115	COG1138	Cytochrome C-type biogenesis protein
CS348_00120	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
CS348_00125	COG3088	subunit of a heme lyase
CS348_00125	COG4235	cytochrome complex assembly
CS348_00130	COG0823	Involved in the tonB-independent uptake of proteins
CS348_00135	COG5645	(Lipo)protein
CS348_00155	COG2149	membrane
CS348_00165	COG0641	radical SAM
CS348_00175	COG2610	gluconate transmembrane transporter activity
CS348_00180	COG0583	DNA-binding transcription factor activity
CS348_00190	COG2814	Major facilitator Superfamily
CS348_00215	COG0028	Belongs to the TPP enzyme family
CS348_00220	COG0440	acetolactate synthase activity
CS348_00225	COG1349	DNA-binding transcription factor activity
CS348_00230	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
CS348_00235	COG0738	Major facilitator superfamily
CS348_00275	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
CS348_00275	COG3711	transcriptional antiterminator
CS348_00280	COG3414	Phosphotransferase system galactitol-specific IIB component
CS348_00285	COG3775	system Galactitol-specific IIC component
CS348_00325	COG2723	6-phospho-beta-galactosidase activity
CS348_00345	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
CS348_00345	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
CS348_00350	COG3715	PTS system
CS348_00355	COG3716	PTS system mannose fructose sorbose family IID component
CS348_00370	COG5464	transposase or invertase
CS348_00405	COG1335	isochorismatase
CS348_00415	COG3710	Transcriptional regulator
CS348_00430	COG2771	luxR family
CS348_00465	COG2211	Major facilitator Superfamily
CS348_00470	COG1501	Belongs to the glycosyl hydrolase 31 family
CS348_00475	COG2982	Protein involved in outer membrane biogenesis
CS348_00480	COG2233	PERMEase
CS348_00485	COG0786	glutamate:sodium symporter activity
CS348_00490	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
CS348_00495	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
CS348_00500	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
CS348_00520	COG2860	membrane
CS348_00530	COG0583	DNA-binding transcription factor activity
CS348_00535	COG1561	YicC-like family, N-terminal region
CS348_00565	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
CS348_00595	COG1519	Transferase
CS348_00600	COG0859	PFAM glycosyl transferase family 9
CS348_00605	COG0438	transferase activity, transferring glycosyl groups
CS348_00680	COG1216	Glycosyl transferase, family 2
CS348_00685	COG2861	carbohydrate metabolic process
CS348_00690	COG4942	peptidase
CS348_00700	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
CS348_00705	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
CS348_00725	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
CS348_00735	COG2186	Transcriptional regulator
CS348_00770	COG3722	fumarate hydratase activity
CS348_00780	COG2213	PTS system mannitol-specific
CS348_00780	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
CS348_00785	COG0625	glutathione transferase activity
CS348_00795	COG3276	selenocysteine insertion sequence binding
CS348_00800	COG1454	alcohol dehydrogenase
CS348_00805	COG1940	carbohydrate kinase activity
CS348_00810	COG1012	belongs to the aldehyde dehydrogenase family
CS348_00825	COG0235	Class ii aldolase
CS348_00830	COG3623	hexulose-6-phosphate isomerase
CS348_00835	COG0269	3-dehydro-L-gulonate-6-phosphate decarboxylase activity
CS348_00840	COG1070	Carbohydrate kinase
CS348_00845	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
CS348_00850	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
CS348_00855	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
CS348_00865	COG2731	YhcH YjgK YiaL family protein
CS348_00875	COG1414	Transcriptional regulator
CS348_00880	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
CS348_00885	COG3977	Valine--pyruvate aminotransferase
CS348_00890	COG0366	Alpha amylase catalytic
CS348_00895	COG2992	FlgJ-related protein
CS348_00900	COG1609	Transcriptional regulator
CS348_00900	COG2207	Transcriptional regulator
CS348_00915	COG1070	Carbohydrate kinase
CS348_00920	COG4682	membrane
CS348_00925	COG3274	enterobacterial common antigen metabolic process
CS348_00950	COG2801	Transposase and inactivated derivatives
CS348_00990	COG1278	Cold shock
CS348_00995	COG2944	sequence-specific DNA binding
CS348_01010	COG2885	chlorophyll binding
CS348_01015	COG0243	molybdopterin cofactor binding
CS348_01020	COG0456	acetyltransferase
CS348_01025	COG2818	Glycosylase
CS348_01030	COG5571	outer membrane autotransporter
CS348_01070	COG0747	negative chemotaxis
CS348_01075	COG0601	transmembrane transport
CS348_01080	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
CS348_01085	COG0444	Belongs to the ABC transporter superfamily
CS348_01090	COG4608	Belongs to the ABC transporter superfamily
CS348_01095	COG0814	amino acid
CS348_01135	COG1215	transferase activity, transferring glycosyl groups
CS348_01160	COG2200	EAL domain
CS348_01160	COG2199	diguanylate cyclase activity
CS348_01175	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
CS348_01180	COG2200	EAL domain
CS348_01185	COG2982	Protein involved in outer membrane biogenesis
CS348_01190	COG0477	Major facilitator Superfamily
CS348_01195	COG1295	ribonuclease BN
CS348_01200	COG0583	DNA-binding transcription factor activity
CS348_01205	COG2197	response regulator
CS348_01225	COG2188	Transcriptional regulator
CS348_01230	COG2222	sugar isomerase
CS348_01235	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
CS348_01240	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
CS348_01250	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
CS348_01255	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
CS348_01260	COG0671	phosphoesterase, PA-phosphatase related
CS348_01290	COG0306	phosphate transporter
CS348_01295	COG2081	HI0933 family
CS348_01300	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
CS348_01305	COG1129	ABC transporter
CS348_01305	COG0842	Transport permease protein
CS348_01310	COG0842	Transport permease protein
CS348_01320	COG2091	lysine biosynthetic process via aminoadipic acid
CS348_01325	COG0628	permease
CS348_01340	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
CS348_01360	COG3714	YhhN family
CS348_01370	COG3776	membrane
CS348_01375	COG0742	ribosomal rna small subunit methyltransferase
CS348_01380	COG0552	protein localization to endoplasmic reticulum
CS348_01385	COG2884	Cell division ATP-binding protein ftsE
CS348_01390	COG2177	Part of the ABC transporter FtsEX involved in
CS348_01415	COG0683	leucine binding
CS348_01420	COG0559	Belongs to the binding-protein-dependent transport system permease family
CS348_01430	COG0411	ABC transporter
CS348_01435	COG0410	ABC transporter
CS348_01450	COG1653	transport
CS348_01470	COG0584	glycerophosphoryl diester phosphodiesterase
CS348_01480	COG0405	Gamma-glutamyltransferase
CS348_01485	COG1735	metal-dependent hydrolase with the TIM-barrel fold
CS348_01500	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
CS348_01505	COG1247	-acetyltransferase
CS348_01515	COG0673	inositol 2-dehydrogenase activity
CS348_01520	COG1741	Belongs to the pirin family
CS348_01525	COG1609	Transcriptional regulator
CS348_01530	COG3265	gluconokinase activity
CS348_01535	COG2610	gluconate transmembrane transporter activity
CS348_01545	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
CS348_01550	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
CS348_01570	COG0058	SHG alpha-glucan phosphorylase activity
CS348_01575	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
CS348_01590	COG1349	DNA-binding transcription factor activity
CS348_01600	COG0058	SHG alpha-glucan phosphorylase activity
CS348_01605	COG1640	4-alpha-glucanotransferase
CS348_01610	COG2610	gluconate transmembrane transporter activity
CS348_01630	COG5464	transposase or invertase
CS348_01645	COG1918	ferrous iron import across plasma membrane
CS348_01655	COG2183	response to ionizing radiation
CS348_01660	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
CS348_01665	COG0745	RESPONSE REGULATOR receiver
CS348_01680	COG3449	Inhibits the supercoiling activity of DNA gyrase. Acts by inhibiting DNA gyrase at an early step, prior to (or at the step of) binding of DNA by the gyrase. It protects cells against toxins that target DNA gyrase, by inhibiting activity of these toxins and reducing the formation of lethal double-strand breaks in the cell
CS348_01690	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
CS348_01695	COG1011	Hydrolase
CS348_01705	COG0494	nUDIX hydrolase
CS348_01710	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
CS348_01715	COG4972	Pilus assembly protein
CS348_01720	COG3166	PFAM Fimbrial assembly family protein
CS348_01735	COG4796	Type ii and iii secretion system protein
CS348_01760	COG3266	domain, Protein
CS348_01765	COG0338	D12 class N6 adenine-specific DNA methyltransferase
CS348_01770	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
CS348_01780	COG0180	Tryptophanyl-tRNA synthetase
CS348_01805	COG2146	nitrite reductase [NAD(P)H] activity
CS348_01810	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
CS348_01845	COG1289	transmembrane transporter activity
CS348_01855	COG1765	OsmC-like protein
CS348_01860	COG3954	Phosphoribulokinase
CS348_01870	COG0429	hydrolase of the alpha beta-hydrolase fold
CS348_01885	COG0488	(ABC) transporter
CS348_01900	COG3529	nucleic-acid-binding protein containing a Zn-ribbon domain
CS348_01905	COG1047	Peptidyl-prolyl cis-trans
CS348_01915	COG0545	Peptidyl-prolyl cis-trans isomerase
CS348_01925	COG1943	Transposase
CS348_01935	COG2964	Protein conserved in bacteria
CS348_01985	COG2906	2 iron, 2 sulfur cluster binding
CS348_02005	COG0051	transcription antitermination factor activity, RNA binding
CS348_02060	COG0093	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
CS348_02110	COG0201	protein transport
CS348_02150	COG0789	Transcriptional regulator
CS348_02155	COG3036	rescue of stalled ribosome
CS348_02165	COG0569	domain protein
CS348_02185	COG0758	DNA mediated transformation
CS348_02195	COG0551	DNA topoisomerase type I activity
CS348_02215	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
CS348_02255	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
CS348_02260	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
CS348_02265	COG1309	transcriptional regulator
CS348_02280	COG2189	Belongs to the N(4) N(6)-methyltransferase family
CS348_02290	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
CS348_02305	COG4145	pantothenate transmembrane transporter activity
CS348_02310	COG3924	membrane
CS348_02315	COG0439	Biotin carboxylase
CS348_02320	COG0511	ligase activity, forming carbon-carbon bonds
CS348_02335	COG0604	alcohol dehydrogenase
CS348_02340	COG2200	EAL domain
CS348_02340	COG2199	diguanylate cyclase activity
CS348_02355	COG1077	Cell shape determining protein MreB Mrl
CS348_02360	COG1792	Involved in formation and maintenance of cell shape
CS348_02365	COG2891	Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins
CS348_02375	COG1530	ribonuclease E activity
CS348_02380	COG3164	Protein of unknown function
CS348_02385	COG0312	modulator of DNA gyrase
CS348_02390	COG0583	DNA-binding transcription factor activity
CS348_02410	COG2732	(Barnase) inhibitor
CS348_02445	COG0471	metal ion transport
CS348_02465	COG5016	pyruvate
CS348_02465	COG0511	ligase activity, forming carbon-carbon bonds
CS348_02485	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
CS348_02490	COG3105	Protein conserved in bacteria
CS348_02495	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
CS348_02515	COG0625	glutathione transferase activity
CS348_02520	COG2969	positive regulation of protein catabolic process
CS348_02550	COG2731	YhcH YjgK YiaL family protein
CS348_02555	COG0402	S-adenosylhomocysteine deaminase activity
CS348_02560	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
CS348_02565	COG4804	nuclease activity
CS348_02570	COG0493	'glutamate synthase
CS348_02575	COG0070	glutamate synthase
CS348_02575	COG0069	glutamate synthase activity
CS348_02575	COG0067	glutamate synthase
CS348_02585	COG1242	4 iron, 4 sulfur cluster binding
CS348_02590	COG2198	Histidine kinase
CS348_02590	COG0784	Response regulator, receiver
CS348_02590	COG5002	protein histidine kinase activity
CS348_02595	COG3155	Displays glyoxalase activity, catalyzing the conversion of glyoxal to glycolate
CS348_02605	COG0515	serine threonine protein kinase
CS348_02615	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
CS348_02625	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
CS348_02640	COG1137	ATPase activity
CS348_02645	COG1934	Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm
CS348_02650	COG3117	lipopolysaccharide transmembrane transporter activity
CS348_02655	COG1778	Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate
CS348_02665	COG0530	calcium, potassium:sodium antiporter activity
CS348_02670	COG1127	ABC transporter
CS348_02675	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
CS348_02680	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
CS348_02685	COG2854	intermembrane phospholipid transfer
CS348_02690	COG3113	response to antibiotic
CS348_02695	COG5007	Belongs to the BolA IbaG family
CS348_02705	COG3423	Transcriptional regulator
CS348_02710	COG0142	geranyltranstransferase activity
CS348_02725	COG0697	spore germination
CS348_02735	COG2027	D-alanyl-D-alanine carboxypeptidase
CS348_02740	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
CS348_02745	COG1534	Rna-binding protein
CS348_02760	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
CS348_02765	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
CS348_02775	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
CS348_02840	COG0513	Belongs to the DEAD box helicase family
CS348_02845	COG0814	amino acid
CS348_02850	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
CS348_02870	COG3153	acetyltransferase
CS348_02885	COG0693	protein deglycase activity
CS348_02890	COG0702	epimerase
CS348_02895	COG2823	Periplasmic or secreted lipoprotein
CS348_02915	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
CS348_02925	COG1063	alcohol dehydrogenase
CS348_02930	COG3775	system Galactitol-specific IIC component
CS348_02935	COG3414	Phosphotransferase system galactitol-specific IIB component
CS348_02940	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
CS348_02955	COG2721	sulfolactate sulfo-lyase activity
CS348_02965	COG2084	Dehydrogenase
CS348_02970	COG1929	Belongs to the glycerate kinase type-1 family
CS348_02995	COG0583	DNA-binding transcription factor activity
CS348_03015	COG1882	Formate acetyltransferase
CS348_03020	COG1760	l-serine dehydratase
CS348_03025	COG0814	amino acid
CS348_03040	COG1741	Belongs to the pirin family
CS348_03045	COG0583	DNA-binding transcription factor activity
CS348_03050	COG3152	Membrane
CS348_03055	COG0435	Glutathione S-transferase
CS348_03060	COG2259	Doxx family
CS348_03070	COG5393	Putative Actinobacterial Holin-X, holin superfamily III
CS348_03075	COG4575	ribosome binding
CS348_03080	COG1422	Protein of unknown function (DUF1090)
CS348_03090	COG0586	Pfam SNARE associated Golgi protein
CS348_03110	COG0673	inositol 2-dehydrogenase activity
CS348_03115	COG2949	membrane
CS348_03120	COG1451	nucleotide metabolic process
CS348_03130	COG1902	pentaerythritol trinitrate reductase activity
CS348_03130	COG0446	pyridine nucleotide-disulphide oxidoreductase
CS348_03145	COG0840	transmembrane signaling receptor activity
CS348_03150	COG0840	transmembrane signaling receptor activity
CS348_03155	COG1695	Transcriptional regulator
CS348_03160	COG2375	cellular response to nickel ion
CS348_03175	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
CS348_03195	COG1951	Catalyzes the reversible hydration of fumarate to (S)- malate
CS348_03205	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
CS348_03220	COG4991	sh3 domain protein
CS348_03225	COG3025	triphosphatase activity
CS348_03245	COG2268	Band 7 protein
CS348_03295	COG3384	dioxygenase
CS348_03300	COG0754	glutathionylspermidine amidase activity
CS348_03320	COG0494	nUDIX hydrolase
CS348_03325	COG3151	Protein conserved in bacteria
CS348_03330	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
CS348_03335	COG3150	esterase
CS348_03340	COG0187	DNA topoisomerase II activity
CS348_03345	COG1359	(4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase activity
CS348_03350	COG2249	NAD(P)H dehydrogenase (quinone) activity
CS348_03360	COG0745	RESPONSE REGULATOR receiver
CS348_03365	COG3111	PFAM Bacterial OB fold (BOF) protein
CS348_03370	COG3449	Inhibits the supercoiling activity of DNA gyrase. Acts by inhibiting DNA gyrase at an early step, prior to (or at the step of) binding of DNA by the gyrase. It protects cells against toxins that target DNA gyrase, by inhibiting activity of these toxins and reducing the formation of lethal double-strand breaks in the cell
CS348_03380	COG0204	Acyl-transferase
CS348_03385	COG2132	Multicopper oxidase
CS348_03410	COG1032	radical SAM domain protein
CS348_03420	COG4238	major outer membrane lipoprotein
CS348_03440	COG4238	major outer membrane lipoprotein
CS348_03455	COG0471	metal ion transport
CS348_03465	COG1979	alcohol dehydrogenase
CS348_03470	COG2207	Transcriptional regulator
CS348_03475	COG0586	Pfam SNARE associated Golgi protein
CS348_03490	COG0811	peptide transport
CS348_03495	COG0848	biopolymer transport protein
CS348_03500	COG1028	Short-chain dehydrogenase reductase Sdr
CS348_03525	COG0840	transmembrane signaling receptor activity
CS348_03540	COG1740	oxidoreductase activity, acting on hydrogen as donor, iron-sulfur protein as acceptor
CS348_03545	COG0437	4 iron, 4 sulfur cluster binding
CS348_03550	COG5557	Pfam Polysulphide reductase, NrfD
CS348_03555	COG0374	Belongs to the NiFe NiFeSe hydrogenase large subunit family
CS348_03560	COG0680	Initiates the rapid degradation of small, acid-soluble proteins during spore germination
CS348_03565	COG1773	rubredoxin
CS348_03570	COG0375	protein maturation
CS348_03575	COG0298	carbon dioxide binding
CS348_03590	COG0625	glutathione transferase activity
CS348_03595	COG0754	glutathionylspermidine amidase activity
CS348_03610	COG0246	Mannitol dehydrogenase
CS348_03625	COG2271	Major facilitator Superfamily
CS348_03640	COG3250	beta-galactosidase activity
CS348_03645	COG1309	transcriptional regulator
CS348_03670	COG1012	belongs to the aldehyde dehydrogenase family
CS348_03675	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
CS348_03685	COG0531	amino acid
CS348_03720	COG2030	dehydratase
CS348_03725	COG0427	acetyl-CoA hydrolase
CS348_03750	COG0305	Participates in initiation and elongation during chromosome replication
CS348_03760	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
CS348_03795	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
CS348_03810	COG0629	single-stranded DNA binding
CS348_03815	COG5464	transposase or invertase
CS348_03865	COG0741	lytic transglycosylase activity
CS348_04085	COG3969	phosphoadenosine phosphosulfate
CS348_04095	COG1475	DNA binding
CS348_04130	COG3539	Fimbrial protein
CS348_04135	COG3188	usher protein
CS348_04140	COG3121	Chaperone
CS348_04315	COG2271	Major facilitator Superfamily
CS348_04320	COG0251	oxidation-reduction process
CS348_04330	COG2964	Protein conserved in bacteria
CS348_04350	COG1074	ATP-dependent DNA helicase activity
CS348_04360	COG4973	Belongs to the 'phage' integrase family. XerC subfamily
CS348_04370	COG1811	Na channel or pump
CS348_04380	COG1982	Orn Lys Arg decarboxylase major
CS348_04385	COG2211	Major facilitator Superfamily
CS348_04415	COG3171	Protein conserved in bacteria
CS348_04425	COG0252	asparaginase activity
CS348_04435	COG0635	Involved in the biosynthesis of porphyrin-containing compound
CS348_04450	COG0762	integral membrane protein
CS348_04455	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
CS348_04460	COG2805	Type II/IV secretion system protein
CS348_04485	COG1385	rRNA (uridine-N3-)-methyltransferase activity
CS348_04490	COG2356	endonuclease I
CS348_04500	COG2814	Major facilitator Superfamily
CS348_04525	COG1166	arginine decarboxylase activity
CS348_04535	COG0501	Belongs to the peptidase M48B family
CS348_04540	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
CS348_04545	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
CS348_04550	COG2213	PTS system mannitol-specific
CS348_04555	COG1063	alcohol dehydrogenase
CS348_04560	COG1494	fructose-1,6-bisphosphatase
CS348_04570	COG1072	(Pantothenic acid kinase))
CS348_04575	COG1122	ATPase activity
CS348_04580	COG1122	ATPase activity
CS348_04615	COG0191	fructose-bisphosphate aldolase activity
CS348_04620	COG0668	transmembrane transport
CS348_04630	COG2968	Membrane
CS348_04645	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
CS348_04650	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
CS348_04675	COG0006	proline dipeptidase activity
CS348_04680	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
CS348_04685	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
CS348_04715	COG2723	6-phospho-beta-galactosidase activity
CS348_04725	COG1272	protein, Hemolysin III
CS348_04755	COG0716	FMN binding
CS348_04760	COG4974	Belongs to the 'phage' integrase family
CS348_04795	COG4942	peptidase
CS348_04840	COG3188	usher protein
CS348_04875	COG0814	amino acid
CS348_04890	COG0183	Belongs to the thiolase family
CS348_04905	COG1028	Short-chain dehydrogenase reductase Sdr
CS348_04915	COG2814	Major facilitator Superfamily
CS348_04920	COG1794	racemase activity, acting on amino acids and derivatives
CS348_04925	COG0583	DNA-binding transcription factor activity
CS348_04930	COG0019	diaminopimelate decarboxylase activity
CS348_04935	COG1609	Transcriptional regulator
CS348_04950	COG0477	Major facilitator Superfamily
CS348_04955	COG0667	Aldo Keto reductase
CS348_04965	COG0861	Integral membrane protein TerC family
CS348_05000	COG2165	general secretion pathway protein
CS348_05005	COG4795	General secretion pathway protein
CS348_05015	COG4967	type IV pilus modification protein PilV
CS348_05020	COG1330	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild- type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity
CS348_05025	COG1025	Belongs to the peptidase M16 family
CS348_05030	COG1074	ATP-dependent DNA helicase activity
CS348_05035	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
CS348_05045	COG0860	N-Acetylmuramoyl-L-alanine amidase
CS348_05060	COG2821	murein-degrading enzyme. may play a role in recycling of muropeptides during cell elongation and or cell division
CS348_05065	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
CS348_05070	COG2962	Rard protein
CS348_05075	COG2166	iron-sulfur cluster assembly
CS348_05080	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
CS348_05090	COG0583	DNA-binding transcription factor activity
CS348_05095	COG2363	Small membrane protein
CS348_05105	COG1349	DNA-binding transcription factor activity
CS348_05125	COG0738	Major facilitator superfamily
CS348_05130	COG0235	Class ii aldolase
CS348_05135	COG1454	alcohol dehydrogenase
CS348_05150	COG1760	l-serine dehydratase
CS348_05155	COG0814	amino acid
CS348_05160	COG1611	Belongs to the LOG family
CS348_05180	COG3098	single-species biofilm formation
CS348_05190	COG0716	FMN binding
CS348_05200	COG2271	Major facilitator Superfamily
CS348_05205	COG4948	Mandelate Racemase Muconate Lactonizing
CS348_05210	COG4948	Mandelate Racemase Muconate Lactonizing
CS348_05215	COG1929	Belongs to the glycerate kinase type-1 family
CS348_05220	COG4999	Histidine kinase
CS348_05220	COG2205	protein histidine kinase activity
CS348_05220	COG3437	response regulator, receiver
CS348_05220	COG3850	Histidine kinase
CS348_05230	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
CS348_05235	COG3609	addiction module antidote protein, CC2985 family
CS348_05250	COG3956	TIGRFAM MazG family protein
CS348_05265	COG0602	queuosine metabolic process
CS348_05270	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
CS348_05270	COG0321	lipoyl(octanoyl) transferase activity
CS348_05275	COG0720	synthase
CS348_05310	COG1203	CRISPR-associated helicase, Cas3
CS348_05325	COG1857	crispr-associated protein
CS348_05340	COG1518	maintenance of DNA repeat elements
CS348_05345	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
CS348_05350	COG2234	aminopeptidase activity
CS348_05420	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
CS348_05425	COG0163	prenyltransferase activity
CS348_05435	COG1349	DNA-binding transcription factor activity
CS348_05440	COG2084	Dehydrogenase
CS348_05450	COG0235	Class ii aldolase
CS348_05455	COG3622	Belongs to the hyi family
CS348_05460	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
CS348_05465	COG2610	gluconate transmembrane transporter activity
CS348_05475	COG0477	Major facilitator Superfamily
CS348_05525	COG2207	Transcriptional regulator
CS348_05540	COG4789	Type iii secretion
CS348_05550	COG1157	protein secretion by the type III secretion system
CS348_05615	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
CS348_05635	COG2801	Transposase and inactivated derivatives
CS348_05710	COG1108	ABC-type Mn2 Zn2 transport systems permease components
CS348_05715	COG1108	ABC-type Mn2 Zn2 transport systems permease components
CS348_05720	COG1121	(ABC) transporter
CS348_05740	COG0309	Hydrogenase expression formation protein (HypE)
CS348_05745	COG0409	Hydrogenase expression formation protein
CS348_05750	COG0298	carbon dioxide binding
CS348_05755	COG0378	Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG
CS348_05760	COG0375	protein maturation
CS348_05775	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
CS348_05780	COG0651	ATP synthesis coupled electron transport
CS348_05785	COG0650	Formate hydrogenlyase subunit 4
CS348_05790	COG3262	NADH dehydrogenase (ubiquinone), 30 kDa subunit
CS348_05790	COG3261	NADH dehydrogenase
CS348_05795	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
CS348_05800	COG3260	NADH ubiquinone oxidoreductase 20
CS348_05810	COG0680	Initiates the rapid degradation of small, acid-soluble proteins during spore germination
CS348_05820	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
CS348_05825	COG0068	Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of NiFe -hydrogenases using carbamoylphosphate as a substrate. It functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide
CS348_05845	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
CS348_05845	COG0517	IMP dehydrogenase activity
CS348_05850	COG1349	DNA-binding transcription factor activity
CS348_05855	COG4578	phosphoenolpyruvate-dependent sugar phosphotransferase system
CS348_05860	COG1028	Short-chain dehydrogenase reductase Sdr
CS348_05870	COG3732	PTS system glucitol sorbitol-specific
CS348_05875	COG3730	PTS system glucitol sorbitol-specific
CS348_05880	COG2951	lytic endotransglycosylase activity
CS348_05890	COG1546	Belongs to the CinA family
CS348_05950	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
CS348_05955	COG1238	metal cluster binding
CS348_05975	COG2814	Major facilitator Superfamily
CS348_05980	COG1566	PFAM secretion protein HlyD family protein
CS348_05985	COG1846	Transcriptional regulator
CS348_06040	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
CS348_06050	COG4575	ribosome binding
CS348_06080	COG2916	Histone family protein nucleoid-structuring protein H-NS
CS348_06090	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
CS348_06095	COG0640	Transcriptional regulator
CS348_06100	COG0401	homolog of Blt101
CS348_06110	COG1652	LysM domain
CS348_06115	COG1802	Transcriptional regulator
CS348_06120	COG1113	amino acid transport
CS348_06125	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
CS348_06130	COG1012	belongs to the aldehyde dehydrogenase family
CS348_06135	COG0579	oxidoreductase
CS348_06165	COG0642	Histidine kinase
CS348_06170	COG3376	Belongs to the NiCoT transporter (TC 2.A.52) family
CS348_06185	COG2990	Protein conserved in bacteria
CS348_06190	COG1357	PFAM Pentapeptide repeats (8 copies)
CS348_06205	COG2819	hydrolase of the alpha beta superfamily
CS348_06260	COG4974	Belongs to the 'phage' integrase family
CS348_06330	COG0582	viral genome integration into host DNA
CS348_06340	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
CS348_06365	COG2867	negative regulation of translational initiation
CS348_06380	COG0497	DNA recombination
CS348_06405	COG4536	flavin adenine dinucleotide binding
CS348_06410	COG4137	Cytochrome C assembly protein
CS348_06420	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
CS348_06445	COG2199	diguanylate cyclase activity
CS348_06455	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
CS348_06460	COG0287	Prephenate dehydrogenase
CS348_06460	COG1605	Chorismate mutase
CS348_06470	COG0077	Prephenate dehydratase
CS348_06470	COG1605	Chorismate mutase
CS348_06475	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
CS348_06480	COG4105	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
CS348_06485	COG0564	pseudouridine synthase activity
CS348_06495	COG0542	response to heat
CS348_06525	COG0477	Major facilitator Superfamily
CS348_06530	COG5544	Lipoprotein
CS348_06535	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
CS348_06550	COG3118	belongs to the thioredoxin family
CS348_06560	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
CS348_06580	COG0583	DNA-binding transcription factor activity
CS348_06585	COG0513	Belongs to the DEAD box helicase family
CS348_06595	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
CS348_06620	COG3086	response to oxidative stress
CS348_06635	COG0681	Belongs to the peptidase S26 family
CS348_06670	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
CS348_06675	COG0583	DNA-binding transcription factor activity
CS348_06685	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
CS348_06690	COG1737	Transcriptional regulator
CS348_06700	COG1263	PTS System
CS348_06700	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
CS348_06705	COG0560	Phosphoserine phosphatase
CS348_06710	COG0590	tRNA wobble adenosine to inosine editing
CS348_06730	COG2205	protein histidine kinase activity
CS348_06735	COG3170	Tfp pilus assembly protein FimV
CS348_06740	COG2204	response regulator
CS348_06745	COG0347	Belongs to the P(II) protein family
CS348_06750	COG3104	oligopeptide transport
CS348_06755	COG1982	Orn Lys Arg decarboxylase major
CS348_06760	COG0531	amino acid
CS348_06765	COG3710	Transcriptional regulator
CS348_06780	COG2814	Major facilitator Superfamily
CS348_06785	COG3711	transcriptional antiterminator
CS348_06795	COG2215	Belongs to the NiCoT transporter (TC 2.A.52) family
CS348_06800	COG2221	Nitrite and sulphite reductase 4Fe-4S
CS348_06840	COG0822	iron-sulfur transferase activity
CS348_06860	COG0633	Ferredoxin
CS348_06865	COG2975	iron-sulfur cluster assembly
CS348_06890	COG2897	thiosulfate sulfurtransferase activity
CS348_06895	COG2373	Large extracellular alpha-helical protein
CS348_06900	COG4953	penicillin-binding protein 1C
CS348_06905	COG0243	molybdopterin cofactor binding
CS348_06910	COG0437	4 iron, 4 sulfur cluster binding
CS348_06955	COG2976	Protein conserved in bacteria
CS348_06970	COG1645	bacterial-type flagellum-dependent swarming motility
CS348_07005	COG1570	exodeoxyribonuclease VII activity
CS348_07010	COG0516	GMP reductase activity
CS348_07010	COG0517	IMP dehydrogenase activity
CS348_07040	COG3133	Outer membrane lipoprotein
CS348_07055	COG2200	EAL domain
CS348_07060	COG0248	Ppx GppA phosphatase
CS348_07070	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
CS348_07085	COG2233	PERMEase
CS348_07095	COG1393	Belongs to the ArsC family
CS348_07100	COG4783	chaperone-mediated protein folding
CS348_07105	COG0628	permease
CS348_07110	COG3835	regulator
CS348_07115	COG2610	gluconate transmembrane transporter activity
CS348_07120	COG1929	Belongs to the glycerate kinase type-1 family
CS348_07125	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
CS348_07130	COG2716	regulation of RNA biosynthetic process
CS348_07140	COG3317	Gram-negative-bacterium-type cell outer membrane assembly
CS348_07150	COG2321	neutral zinc metallopeptidase
CS348_07170	COG1393	Belongs to the ArsC family
CS348_07175	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
CS348_07180	COG3850	Histidine kinase
CS348_07185	COG0493	'glutamate synthase
CS348_07185	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
CS348_07200	COG5342	invasion associated locus B
CS348_07210	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
CS348_07235	COG4917	ethanolamine utilization protein
CS348_07270	COG4820	ethanolamine utilization protein (EutJ)
CS348_07300	COG4816	utilization protein
CS348_07340	COG2837	iron assimilation
CS348_07345	COG1028	Short-chain dehydrogenase reductase Sdr
CS348_07360	COG4208	sulfate ABC transporter
CS348_07400	COG2190	(PTS) system
CS348_07410	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
CS348_07415	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
CS348_07440	COG3530	Putative quorum-sensing-regulated virulence factor
CS348_07445	COG0385	Bile acid
CS348_07450	COG0583	DNA-binding transcription factor activity
CS348_07460	COG0005	The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate
CS348_07465	COG2211	Major facilitator Superfamily
CS348_07475	COG0583	DNA-binding transcription factor activity
CS348_07500	COG3415	Transposase
CS348_07505	COG3415	Transposase
CS348_07525	COG2200	EAL domain
CS348_07525	COG2199	diguanylate cyclase activity
CS348_07530	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
CS348_07565	COG4397	Mu-like prophage major head subunit gpT
CS348_07590	COG0667	Aldo Keto reductase
CS348_07595	COG3961	Belongs to the TPP enzyme family
CS348_07610	COG0436	Aminotransferase
CS348_07615	COG1560	Kdo2-lipid A biosynthetic process
CS348_07640	COG1840	ABC-type Fe3 transport system, periplasmic component
CS348_07665	COG2116	formate transmembrane transporter activity
CS348_07685	COG3691	Protein conserved in bacteria
CS348_07700	COG2062	phosphohistidine phosphatase, SixA
CS348_07710	COG2890	protein-(glutamine-N5) methyltransferase activity
CS348_07725	COG0730	response to heat
CS348_07730	COG3101	peptidyl-lysine hydroxylation
CS348_07745	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
CS348_07765	COG3423	Transcriptional regulator
CS348_07790	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
CS348_07800	COG0586	Pfam SNARE associated Golgi protein
CS348_07810	COG0285	dihydrofolate synthase activity
CS348_07815	COG3147	Non-essential cell division protein that could be required for efficient cell constriction
CS348_07820	COG1286	toxin biosynthetic process
CS348_07825	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
CS348_07840	COG0531	amino acid
CS348_07845	COG3457	Alanine racemase
CS348_07850	COG0833	amino acid
CS348_07855	COG0163	prenyltransferase activity
CS348_07875	COG4215	(ABC) transporter
CS348_07880	COG4160	amino acid transport
CS348_07890	COG1090	epimerase
CS348_07895	COG0625	glutathione transferase activity
CS348_07900	COG0625	glutathione transferase activity
CS348_07905	COG0622	Phosphoesterase
CS348_07910	COG1443	Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP)
CS348_07915	COG1609	Transcriptional regulator
CS348_07925	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
CS348_07935	COG3037	sugar-specific permease SgaT UlaA
CS348_07940	COG3959	Transketolase, thiamine diphosphate binding domain
CS348_07945	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
CS348_07950	COG1288	antiporter activity
CS348_07960	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
CS348_07975	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
CS348_07980	COG0490	domain, Protein
CS348_07980	COG0471	metal ion transport
CS348_07990	COG0436	Aminotransferase
CS348_08000	COG0583	DNA-binding transcription factor activity
CS348_08025	COG1905	PFAM NADH dehydrogenase (ubiquinone) 24 kDa subunit
CS348_08035	COG1034	ATP synthesis coupled electron transport
CS348_08050	COG0839	Belongs to the complex I subunit 6 family
CS348_08060	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
CS348_08065	COG1008	NDH-1 shuttles electrons from NAD(P)H, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
CS348_08075	COG0835	chemotaxis
CS348_08075	COG0784	Response regulator, receiver
CS348_08085	COG2153	protein acetylation
CS348_08090	COG4575	ribosome binding
CS348_08095	COG1169	isochorismate synthase
CS348_08185	COG1414	Transcriptional regulator
CS348_08195	COG2271	Major facilitator Superfamily
CS348_08215	COG5160	protein modification by small protein removal
CS348_08225	COG0247	lactate metabolic process
CS348_08235	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
CS348_08240	COG2271	Major facilitator Superfamily
CS348_08245	COG0584	glycerophosphoryl diester phosphodiesterase
CS348_08250	COG0583	DNA-binding transcription factor activity
CS348_08255	COG2814	Major facilitator Superfamily
CS348_08260	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
CS348_08290	COG4948	Mandelate Racemase Muconate Lactonizing
CS348_08305	COG0784	Response regulator, receiver
CS348_08305	COG2205	protein histidine kinase activity
CS348_08315	COG2198	Histidine kinase
CS348_08315	COG0642	Histidine kinase
CS348_08325	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
CS348_08345	COG4615	Cyclic peptide transporter
CS348_08355	COG1149	4fe-4S ferredoxin, iron-sulfur binding domain protein
CS348_08355	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
CS348_08360	COG3062	negative regulation of establishment of protein localization
CS348_08370	COG0437	4 iron, 4 sulfur cluster binding
CS348_08375	COG0348	domain, Protein
CS348_08385	COG3043	anaerobic respiration
CS348_08390	COG3005	denitrification pathway
CS348_08400	COG2386	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
CS348_08405	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
CS348_08410	COG3114	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
CS348_08420	COG1138	Cytochrome C-type biogenesis protein
CS348_08425	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
CS348_08430	COG4235	cytochrome complex assembly
CS348_08430	COG3088	subunit of a heme lyase
CS348_08435	COG2197	response regulator
CS348_08490	COG1061	Type III restriction enzyme res subunit
CS348_08495	COG1187	pseudouridine synthase activity
CS348_08500	COG2814	Major facilitator Superfamily
CS348_08515	COG4172	Belongs to the ABC transporter superfamily
CS348_08520	COG4239	(ABC) transporter, permease
CS348_08525	COG4174	ABC transporter (Permease)
CS348_08530	COG4166	transmembrane transport
CS348_08535	COG2200	EAL domain
CS348_08545	COG0791	NLP P60 protein
CS348_08555	COG0671	phosphoesterase, PA-phosphatase related
CS348_08560	COG0523	cobalamin synthesis protein
CS348_08600	COG1105	Belongs to the carbohydrate kinase PfkB family
CS348_08605	COG3925	protein-phosphocysteine-D-fructose-phosphotransferase system transporter activity
CS348_08605	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
CS348_08605	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
CS348_08615	COG2855	membrane
CS348_08620	COG0583	DNA-binding transcription factor activity
CS348_08625	COG0833	amino acid
CS348_08635	COG4771	TonB-dependent receptor
CS348_08640	COG2271	Major facilitator Superfamily
CS348_08645	COG0560	Phosphoserine phosphatase
CS348_08650	COG1760	l-serine dehydratase
CS348_08675	COG2311	Membrane
CS348_08720	COG2949	membrane
CS348_08730	COG1346	cytolysis
CS348_08745	COG2271	Major facilitator Superfamily
CS348_08760	COG0625	glutathione transferase activity
CS348_08765	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
CS348_08780	COG1538	Outer membrane efflux protein
CS348_08785	COG1028	Short-chain dehydrogenase reductase Sdr
CS348_08790	COG0586	Pfam SNARE associated Golgi protein
CS348_08805	COG1686	Belongs to the peptidase S11 family
CS348_08810	COG0277	FAD linked oxidase domain protein
CS348_08820	COG1732	Glycine betaine
CS348_08825	COG1174	glycine betaine transport
CS348_08830	COG1125	glycine betaine transport
CS348_08835	COG1174	glycine betaine transport
CS348_08850	COG3275	phosphorelay sensor kinase activity
CS348_08860	COG4807	Protein conserved in bacteria
CS348_08870	COG4808	Protein conserved in bacteria
CS348_08895	COG3121	Chaperone
CS348_08900	COG3188	usher protein
CS348_08910	COG5455	response to cobalt ion
CS348_08925	COG2188	Transcriptional regulator
CS348_08930	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
CS348_08935	COG1397	ADP-ribosylglycohydrolase
CS348_08940	COG2211	Major facilitator Superfamily
CS348_08945	COG1830	Aldolase
CS348_08995	COG0745	RESPONSE REGULATOR receiver
CS348_09000	COG2205	protein histidine kinase activity
CS348_09025	COG0443	Heat shock 70 kDa protein
CS348_09035	COG0122	3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
CS348_09040	COG5001	Diguanylate cyclase
CS348_09040	COG5002	protein histidine kinase activity
CS348_09040	COG3447	MASE1 domain protein
CS348_09055	COG2982	Protein involved in outer membrane biogenesis
CS348_09060	COG1253	flavin adenine dinucleotide binding
CS348_09085	COG0463	Glycosyl transferase, family 2
CS348_09090	COG1045	serine acetyltransferase
CS348_09095	COG0438	transferase activity, transferring glycosyl groups
CS348_09105	COG1216	Glycosyl transferase, family 2
CS348_09110	COG0110	maltose O-acetyltransferase activity
CS348_09115	COG1089	Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose
CS348_09120	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
CS348_09130	COG0297	glycogen (starch) synthase activity
CS348_09145	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
CS348_09150	COG2244	polysaccharide biosynthetic process
CS348_09155	COG2327	Polysaccharide pyruvyl transferase
CS348_09170	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
CS348_09175	COG1210	Utp--glucose-1-phosphate uridylyltransferase
CS348_09180	COG2244	polysaccharide biosynthetic process
CS348_09185	COG1216	Glycosyl transferase, family 2
CS348_09210	COG1089	Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose
CS348_09215	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
CS348_09220	COG1051	belongs to the nudix hydrolase family
CS348_09305	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
CS348_09310	COG0583	DNA-binding transcription factor activity
CS348_09315	COG0531	amino acid
CS348_09320	COG2925	Exonuclease
CS348_09345	COG0437	4 iron, 4 sulfur cluster binding
CS348_09360	COG3449	Inhibits the supercoiling activity of DNA gyrase. Acts by inhibiting DNA gyrase at an early step, prior to (or at the step of) binding of DNA by the gyrase. It protects cells against toxins that target DNA gyrase, by inhibiting activity of these toxins and reducing the formation of lethal double-strand breaks in the cell
CS348_09365	COG1289	transmembrane transporter activity
CS348_09390	COG4810	utilization protein
CS348_09400	COG4656	Part of a membrane complex involved in electron transport
CS348_09435	COG4577	Carbon dioxide concentrating mechanism carboxysome shell protein
CS348_09440	COG4577	Carbon dioxide concentrating mechanism carboxysome shell protein
CS348_09475	COG4577	Carbon dioxide concentrating mechanism carboxysome shell protein
CS348_09510	COG2241	protein methyltransferase activity
CS348_09520	COG2875	Belongs to the precorrin methyltransferase family
CS348_09565	COG1122	ATPase activity
CS348_09605	COG1982	Orn Lys Arg decarboxylase major
CS348_09620	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
CS348_09625	COG0583	DNA-binding transcription factor activity
CS348_09635	COG0640	Transcriptional regulator
CS348_09640	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
CS348_09655	COG0798	PFAM Bile acid sodium symporter
CS348_09675	COG0534	Mate efflux family protein
CS348_09705	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
CS348_09770	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
CS348_09780	COG1418	mRNA catabolic process
CS348_09785	COG0270	DNA (cytosine-5-)-methyltransferase activity
CS348_09790	COG3727	T/G mismatch-specific endonuclease activity
CS348_09795	COG0697	spore germination
CS348_09800	COG2354	Protein conserved in bacteria
CS348_09805	COG5475	Uncharacterized small protein (DUF2158)
CS348_09840	COG1987	bacterial-type flagellum assembly
CS348_09850	COG3190	flagellar
CS348_09875	COG2882	bacterial-type flagellum organization
CS348_09890	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
CS348_09910	COG0425	Belongs to the sulfur carrier protein TusA family
CS348_09955	COG1191	sigma factor activity
CS348_09985	COG2197	response regulator
CS348_10000	COG2197	response regulator
CS348_10045	COG3318	Belongs to the UPF0149 family
CS348_10045	COG3012	SEC-C Motif Domain Protein
CS348_10050	COG0814	amino acid
CS348_10060	COG1528	Iron-storage protein
CS348_10075	COG1528	Iron-storage protein
CS348_10155	COG0745	RESPONSE REGULATOR receiver
CS348_10180	COG4225	unsaturated rhamnogalacturonyl hydrolase activity
CS348_10195	COG3102	Protein conserved in bacteria
CS348_10220	COG3788	relative of glutathione S-transferase, MAPEG superfamily
CS348_10225	COG1801	Protein of unknown function DUF72
CS348_10230	COG1335	isochorismatase
CS348_10240	COG0494	nUDIX hydrolase
CS348_10275	COG1108	ABC-type Mn2 Zn2 transport systems permease components
CS348_10285	COG4531	ABC-type Zn2 transport system, periplasmic component surface adhesin
CS348_10290	COG0739	heme binding
CS348_10300	COG1560	Kdo2-lipid A biosynthetic process
CS348_10310	COG1737	Transcriptional regulator
CS348_10320	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
CS348_10325	COG0129	dihydroxy-acid dehydratase activity
CS348_10330	COG0800	Aldolase
CS348_10340	COG3141	response to X-ray
CS348_10350	COG2979	Protein of unknown function (DUF533)
CS348_10355	COG1770	oligopeptidase
CS348_10360	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
CS348_10365	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
CS348_10375	COG2372	response to copper ion
CS348_10380	COG1276	copper resistance
CS348_10435	COG5301	cellulose 1,4-beta-cellobiosidase activity
CS348_10530	COG5562	phage envelope protein
CS348_10565	COG3008	intermembrane lipid transfer
CS348_10570	COG2995	paraquat-inducible protein a
CS348_10575	COG1956	GAF domain-containing protein
CS348_10595	COG2814	Major facilitator Superfamily
CS348_10600	COG1414	Transcriptional regulator
CS348_10625	COG1278	Cold shock
CS348_10630	COG0768	penicillin binding
CS348_10635	COG2226	methyltransferase
CS348_10655	COG3716	PTS system mannose fructose sorbose family IID component
CS348_10660	COG3715	PTS system
CS348_10665	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
CS348_10665	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
CS348_10675	COG1253	flavin adenine dinucleotide binding
CS348_10680	COG2200	EAL domain
CS348_10685	COG1760	l-serine dehydratase
CS348_10705	COG0251	oxidation-reduction process
CS348_10710	COG1199	ATP-dependent helicase activity
CS348_10720	COG3065	identical protein binding
CS348_10730	COG0318	PFAM AMP-dependent synthetase and ligase
CS348_10735	COG0349	Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides
CS348_10745	COG2894	cell division
CS348_10760	COG0179	Fumarylacetoacetate (FAA) hydrolase
CS348_10800	COG2719	SpoVR family
CS348_10820	COG1619	proteins homologs of microcin C7 resistance protein MccF
CS348_10845	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
CS348_10855	COG1294	oxidase, subunit
CS348_10860	COG1271	oxidase subunit
CS348_10865	COG1773	rubredoxin
CS348_10870	COG1999	signal sequence binding
CS348_10875	COG0680	Initiates the rapid degradation of small, acid-soluble proteins during spore germination
CS348_10880	COG1969	Ni Fe-hydrogenase, b-type cytochrome subunit
CS348_10890	COG1740	oxidoreductase activity, acting on hydrogen as donor, iron-sulfur protein as acceptor
CS348_10905	COG0012	GTP binding
CS348_10920	COG0659	secondary active sulfate transmembrane transporter activity
CS348_10925	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
CS348_10955	COG3094	Invasion gene expression up-regulator, SirB
CS348_10960	COG2912	Transglutaminase-like superfamily
CS348_10970	COG0387	Pfam Sodium calcium exchanger
CS348_10975	COG4572	Cation transport regulator
CS348_10980	COG1553	Part of a sulfur-relay system required for 2-thiolation of 5-methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions. Accepts sulfur from TusA and transfers it in turn to TusE
CS348_10985	COG4932	domain protein
CS348_10990	COG2197	response regulator
CS348_10995	COG3850	Histidine kinase
CS348_11005	COG2223	nitrite transmembrane transporter activity
CS348_11010	COG5013	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
CS348_11015	COG1140	nitrate reductase beta subunit
CS348_11020	COG2180	nitrate reductase molybdenum cofactor assembly chaperone
CS348_11025	COG2181	nitrate reductase activity
CS348_11065	COG0788	formyltetrahydrofolate deformylase activity
CS348_11075	COG1752	Esterase of the alpha-beta hydrolase superfamily
CS348_11080	COG0745	RESPONSE REGULATOR receiver
CS348_11085	COG1210	Utp--glucose-1-phosphate uridylyltransferase
CS348_11100	COG1012	belongs to the aldehyde dehydrogenase family
CS348_11100	COG1454	alcohol dehydrogenase
CS348_11105	COG2095	MarC family integral membrane protein
CS348_11140	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
CS348_11160	COG2350	Protein conserved in bacteria
CS348_11170	COG1607	acyl-coa hydrolase
CS348_11200	COG3546	catalase activity
CS348_11205	COG3685	Protein conserved in bacteria
CS348_11210	COG3685	Protein conserved in bacteria
CS348_11215	COG3729	General stress protein
CS348_11255	COG0009	L-threonylcarbamoyladenylate synthase
CS348_11270	COG1028	Short-chain dehydrogenase reductase Sdr
CS348_11275	COG0616	signal peptide processing
CS348_11290	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
CS348_11330	COG0671	phosphoesterase, PA-phosphatase related
CS348_11340	COG3771	Involved in the assembly of lipopolysaccharide (LPS)
CS348_11345	COG2956	Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane
CS348_11355	COG0023	Translation Initiation Factor
CS348_11365	COG1349	DNA-binding transcription factor activity
CS348_11375	COG5001	Diguanylate cyclase
CS348_11390	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
CS348_11390	COG4950	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
CS348_11430	COG4171	peptide transport system, permease
CS348_11470	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
CS348_11475	COG4168	peptide transport system, permease
CS348_11485	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
CS348_11490	COG1842	Phage shock protein A
CS348_11500	COG1983	PspC domain protein
CS348_11510	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
CS348_11515	COG3106	COG3106 Predicted ATPase
CS348_11525	COG3283	Transcriptional regulator of aromatic amino acids metabolism
CS348_11535	COG4948	Mandelate Racemase Muconate Lactonizing
CS348_11540	COG2866	Carboxypeptidase
CS348_11545	COG4166	transmembrane transport
CS348_11555	COG0583	DNA-binding transcription factor activity
CS348_11560	COG0656	L-ascorbic acid biosynthetic process
CS348_11565	COG1028	Short-chain dehydrogenase reductase Sdr
CS348_11570	COG1309	transcriptional regulator
CS348_11610	COG2077	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
CS348_11630	COG0668	transmembrane transport
CS348_11635	COG3182	Iron-regulated membrane protein
CS348_11650	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
CS348_11655	COG2840	Smr protein MutS2
CS348_11665	COG0840	transmembrane signaling receptor activity
CS348_11680	COG0513	Belongs to the DEAD box helicase family
CS348_11700	COG2076	Multidrug Resistance protein
CS348_11705	COG0589	response to stress
CS348_11715	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
CS348_11715	COG0674	pyruvate-flavodoxin oxidoreductase activity
CS348_11715	COG1013	pyruvate-flavodoxin oxidoreductase activity
CS348_11715	COG1014	Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
CS348_11725	COG3042	response to heat
CS348_11730	COG3187	Heat shock protein
CS348_11735	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
CS348_11740	COG2911	Protein conserved in bacteria
CS348_11750	COG3784	Protein of unknown function (DUF1318)
CS348_11765	COG1643	Atp-dependent helicase
CS348_11770	COG1434	Gram-negative-bacterium-type cell wall biogenesis
CS348_11775	COG3038	cytochrome b561
CS348_11780	COG0500	methyltransferase
CS348_11790	COG0765	amino acid transport
CS348_11800	COG0765	amino acid transport
CS348_11805	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CS348_11845	COG0840	transmembrane signaling receptor activity
CS348_11850	COG0583	DNA-binding transcription factor activity
CS348_11855	COG5383	Protein conserved in bacteria
CS348_11860	COG2272	Belongs to the type-B carboxylesterase lipase family
CS348_11870	COG2353	YceI-like domain
CS348_11875	COG1304	FMN binding
CS348_11885	COG1349	DNA-binding transcription factor activity
CS348_11890	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
CS348_11895	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
CS348_11900	COG0434	BtpA family
CS348_11905	COG3775	system Galactitol-specific IIC component
CS348_11910	COG3414	Phosphotransferase system galactitol-specific IIB component
CS348_11920	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
CS348_11925	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
CS348_11930	COG1275	C4-dicarboxylate transporter malic acid transport protein
CS348_11935	COG0500	methyltransferase
CS348_11945	COG3135	benzoate transporter
CS348_11950	COG1396	sequence-specific DNA binding
CS348_11955	COG0826	peptidase U32
CS348_11980	COG2173	Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide
CS348_11985	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
CS348_11990	COG1012	belongs to the aldehyde dehydrogenase family
CS348_12025	COG3238	Protein conserved in bacteria
CS348_12035	COG2130	NADP-dependent
CS348_12040	COG1802	Transcriptional regulator
CS348_12045	COG4772	TonB-dependent receptor
CS348_12090	COG2181	nitrate reductase activity
CS348_12095	COG2180	nitrate reductase molybdenum cofactor assembly chaperone
CS348_12100	COG1140	nitrate reductase beta subunit
CS348_12105	COG5013	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
CS348_12145	COG0243	molybdopterin cofactor binding
CS348_12145	COG3383	formate dehydrogenase (NAD+) activity
CS348_12150	COG0243	molybdopterin cofactor binding
CS348_12150	COG3383	formate dehydrogenase (NAD+) activity
CS348_12155	COG0437	4 iron, 4 sulfur cluster binding
CS348_12160	COG2864	formate dehydrogenase
CS348_12165	COG1064	alcohol dehydrogenase
CS348_12185	COG1764	response to oxidative stress
CS348_12215	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
CS348_12230	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
CS348_12235	COG1757	Na H antiporter
CS348_12240	COG1609	Transcriptional regulator
CS348_12250	COG0583	DNA-binding transcription factor activity
CS348_12290	COG0251	oxidation-reduction process
CS348_12295	COG0809	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
CS348_12305	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
CS348_12320	COG2271	Major facilitator Superfamily
CS348_12325	COG1063	alcohol dehydrogenase
CS348_12330	COG2186	Transcriptional regulator
CS348_12340	COG1740	oxidoreductase activity, acting on hydrogen as donor, iron-sulfur protein as acceptor
CS348_12345	COG0374	Belongs to the NiFe NiFeSe hydrogenase large subunit family
CS348_12370	COG1773	rubredoxin
CS348_12395	COG3781	membrane
CS348_12410	COG1012	belongs to the aldehyde dehydrogenase family
CS348_12415	COG0583	DNA-binding transcription factor activity
CS348_12430	COG1846	Transcriptional regulator
CS348_12450	COG2814	Major facilitator Superfamily
CS348_12460	COG3111	PFAM Bacterial OB fold (BOF) protein
CS348_12465	COG1546	Belongs to the CinA family
CS348_12470	COG3729	General stress protein
CS348_12485	COG4221	oxidoreductase activity
CS348_12490	COG1802	Transcriptional regulator
CS348_12500	COG0246	Mannitol dehydrogenase
CS348_12505	COG0477	Major facilitator Superfamily
CS348_12510	COG1063	alcohol dehydrogenase
CS348_12530	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
CS348_12550	COG0243	molybdopterin cofactor binding
CS348_12555	COG0437	4 iron, 4 sulfur cluster binding
CS348_12560	COG3302	dmso reductase anchor subunit
CS348_12595	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
CS348_12600	COG1940	carbohydrate kinase activity
CS348_12610	COG0583	DNA-binding transcription factor activity
CS348_12615	COG2814	Major facilitator Superfamily
CS348_12630	COG3591	Belongs to the peptidase S1B family
CS348_12650	COG0628	permease
CS348_12655	COG1282	The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
CS348_12660	COG3288	NAD(P)+ transhydrogenase (AB-specific) activity
CS348_12670	COG0531	amino acid
CS348_12675	COG3136	membrane protein required for alginate biosynthesis
CS348_12680	COG0745	RESPONSE REGULATOR receiver
CS348_12690	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
CS348_12695	COG1001	Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
CS348_12700	COG2205	protein histidine kinase activity
CS348_12725	COG5339	Protein conserved in bacteria
CS348_12730	COG1609	Transcriptional regulator
CS348_12735	COG1263	PTS System
CS348_12735	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
CS348_12740	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
CS348_12750	COG0673	inositol 2-dehydrogenase activity
CS348_12800	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
CS348_12810	COG0625	glutathione transferase activity
CS348_12830	COG3895	Periplasmic Protein
CS348_12840	COG3133	Outer membrane lipoprotein
CS348_12855	COG1566	PFAM secretion protein HlyD family protein
CS348_12870	COG4989	oxidoreductase activity
CS348_12875	COG3313	Fe-S protein
CS348_12880	COG1309	transcriptional regulator
CS348_12885	COG1902	pentaerythritol trinitrate reductase activity
CS348_12890	COG0346	lactoylglutathione lyase activity
CS348_12900	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
CS348_12905	COG0791	NLP P60 protein
CS348_12910	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
CS348_12930	COG0583	DNA-binding transcription factor activity
CS348_12935	COG2814	Major facilitator Superfamily
CS348_12940	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
CS348_12945	COG0307	riboflavin synthase, alpha
CS348_13120	COG2205	protein histidine kinase activity
CS348_13120	COG3437	response regulator, receiver
CS348_13120	COG3850	Histidine kinase
CS348_13120	COG4999	Histidine kinase
CS348_13130	COG0789	Transcriptional regulator
CS348_13135	COG3272	Protein of unknown function (DUF1722)
CS348_13170	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
CS348_13180	COG2267	carboxylic ester hydrolase activity
CS348_13185	COG0531	amino acid
CS348_13200	COG4238	major outer membrane lipoprotein
CS348_13205	COG1376	ErfK ybiS ycfS ynhG family protein
CS348_13220	COG0719	Fe-S assembly protein
CS348_13225	COG0396	ATPase activity
CS348_13230	COG0719	Fe-S assembly protein
CS348_13235	COG0316	Belongs to the HesB IscA family
CS348_13250	COG2050	protein possibly involved in aromatic compounds catabolism
CS348_13255	COG0277	FAD linked oxidase domain protein
CS348_13255	COG0247	lactate metabolic process
CS348_13260	COG0628	permease
CS348_13275	COG0738	Major facilitator superfamily
CS348_13280	COG2271	Major facilitator Superfamily
CS348_13295	COG4670	ketone body catabolic process
CS348_13300	COG1960	acyl-CoA dehydrogenase activity
CS348_13305	COG1917	Cupin 2, conserved barrel domain protein
CS348_13305	COG2207	Transcriptional regulator
CS348_13310	COG2086	electron transfer activity
CS348_13315	COG2025	fatty acid beta-oxidation using acyl-CoA dehydrogenase
CS348_13320	COG0644	oxidoreductase
CS348_13325	COG2440	electron transfer flavoprotein-ubiquinone oxidoreductase
CS348_13330	COG0318	PFAM AMP-dependent synthetase and ligase
CS348_13335	COG0574	Belongs to the PEP-utilizing enzyme family
CS348_13335	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
CS348_13350	COG4256	Hemin uptake protein
CS348_13365	COG0791	NLP P60 protein
CS348_13375	COG0386	Belongs to the glutathione peroxidase family
CS348_13390	COG4974	Belongs to the 'phage' integrase family
CS348_13485	COG4695	Portal protein
CS348_13565	COG5301	cellulose 1,4-beta-cellobiosidase activity
CS348_13680	COG3137	Salt-induced outer membrane protein
CS348_13685	COG1105	Belongs to the carbohydrate kinase PfkB family
CS348_13705	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
CS348_13710	COG1988	membrane-bound metal-dependent
CS348_13725	COG0753	catalase activity
CS348_13735	COG1486	melibiose metabolic process
CS348_13740	COG2169	Transcriptional regulator
CS348_13740	COG1917	Cupin 2, conserved barrel domain protein
CS348_13745	COG1447	Phosphotransferase system cellobiose-specific component IIA
CS348_13750	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
CS348_13755	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
CS348_13765	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
CS348_13775	COG0322	excinuclease ABC activity
CS348_13780	COG3678	ATP-independent chaperone mediated protein folding
CS348_13820	COG0708	Exodeoxyribonuclease III
CS348_13825	COG0494	nUDIX hydrolase
CS348_13840	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
CS348_13855	COG0778	Nitroreductase
CS348_13865	COG0616	signal peptide processing
CS348_13870	COG0252	asparaginase activity
CS348_13875	COG1335	isochorismatase
CS348_13880	COG3139	Protein of unknown function (DUF1315)
CS348_13890	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
CS348_13905	COG0656	L-ascorbic acid biosynthetic process
CS348_13910	COG0641	radical SAM
CS348_13915	COG3713	MltA-interacting MipA family protein
CS348_13920	COG2766	serine protein kinase
CS348_13930	COG2199	diguanylate cyclase activity
CS348_13935	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
CS348_13950	COG2207	Transcriptional regulator
CS348_13955	COG2807	transmembrane transport
CS348_13960	COG3189	MarR family transcriptional regulator
CS348_13970	COG3042	response to heat
CS348_13980	COG2261	transglycosylase associated protein
CS348_14000	COG3615	Tellurite resistance protein tehB
CS348_14015	COG1605	Chorismate mutase
CS348_14035	COG0789	Transcriptional regulator
CS348_14050	COG3443	Belongs to the bacterial solute-binding protein 9 family
CS348_14065	COG0668	transmembrane transport
CS348_14070	COG1124	(ABC) transporter
CS348_14100	COG3038	cytochrome b561
CS348_14115	COG0071	Belongs to the small heat shock protein (HSP20) family
CS348_14160	COG1278	Cold shock
CS348_14180	COG3021	interspecies interaction between organisms
CS348_14215	COG0538	isocitrate dehydrogenase activity
CS348_14245	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
CS348_14260	COG2850	peptidyl-arginine hydroxylation
CS348_14285	COG1176	ABC-type spermidine putrescine transport system, permease component I
CS348_14295	COG1177	transmembrane transport
CS348_14300	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
CS348_14305	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
CS348_14315	COG4591	ABC-type transport system involved in lipoprotein release permease component
CS348_14325	COG4591	ABC-type transport system involved in lipoprotein release permease component
CS348_14330	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
CS348_14345	COG1309	transcriptional regulator
CS348_14350	COG3134	Outer membrane lipoprotein
CS348_14355	COG1252	NADH dehydrogenase
CS348_14380	COG5633	Lipoprotein
CS348_14385	COG0537	adenosine 5'-monophosphoramidase activity
CS348_14390	COG4773	Receptor
CS348_14400	COG0084	hydrolase, TatD family'
CS348_14405	COG0470	DNA polymerase III
CS348_14415	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
CS348_14420	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
CS348_14425	COG3539	Fimbrial protein
CS348_14430	COG3121	Chaperone
CS348_14455	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
CS348_14465	COG1028	Short-chain dehydrogenase reductase Sdr
CS348_14490	COG1399	metal-binding, possibly nucleic acid-binding protein
CS348_14520	COG1530	ribonuclease E activity
CS348_14530	COG1256	bacterial-type flagellum assembly
CS348_14550	COG4786	Flagellar basal body rod
CS348_14560	COG1749	Flagellar hook protein flgE
CS348_14565	COG1843	Required for flagellar hook formation. May act as a scaffolding protein
CS348_14570	COG1558	bacterial-type flagellum-dependent cell motility
CS348_14595	COG3418	PFAM FlgN family protein
CS348_14615	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
CS348_14625	COG2999	glutathione oxidoreductase activity
CS348_14665	COG3038	cytochrome b561
CS348_14680	COG1560	Kdo2-lipid A biosynthetic process
CS348_14700	COG5645	(Lipo)protein
CS348_14705	COG2943	transferase activity, transferring hexosyl groups
CS348_14720	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
CS348_14725	COG2110	phosphatase homologous to the C-terminal domain of histone macroH2A1
CS348_14765	COG1462	curli production assembly transport component CsgG
CS348_14775	COG3381	protein complex oligomerization
CS348_14805	COG0673	inositol 2-dehydrogenase activity
CS348_14810	COG2814	Major facilitator Superfamily
CS348_14815	COG1452	involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane
CS348_14835	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
CS348_14840	COG1737	Transcriptional regulator
CS348_14845	COG1702	phosphate starvation-inducible protein PhoH
CS348_14875	COG1309	transcriptional regulator
CS348_14880	COG3729	General stress protein
CS348_14900	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
CS348_14905	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
CS348_14905	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
CS348_14910	COG4232	protein-disulfide reductase activity
CS348_14965	COG3971	2-oxopent-4-enoate hydratase activity
CS348_14975	COG3384	dioxygenase
CS348_14980	COG1012	belongs to the aldehyde dehydrogenase family
CS348_14990	COG1846	Transcriptional regulator
CS348_14995	COG2368	4-hydroxyphenylacetate
CS348_15015	COG0745	RESPONSE REGULATOR receiver
CS348_15020	COG2205	protein histidine kinase activity
CS348_15070	COG0670	Belongs to the BI1 family
CS348_15080	COG1254	Belongs to the acylphosphatase family
CS348_15090	COG1881	PFAM PEBP family protein
CS348_15105	COG1832	CoA-binding protein
CS348_15120	COG0210	DNA helicase
CS348_15125	COG3304	Inner membrane component domain
CS348_15130	COG1289	transmembrane transporter activity
CS348_15135	COG3070	regulator of competence-specific genes
CS348_15145	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
CS348_15145	COG2885	chlorophyll binding
CS348_15155	COG1067	ATP-dependent peptidase activity
CS348_15165	COG3130	regulation of translation
CS348_15170	COG3009	Protein conserved in bacteria
CS348_15175	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
CS348_15175	COG3008	intermembrane lipid transfer
CS348_15180	COG2995	paraquat-inducible protein a
CS348_15185	COG0488	(ABC) transporter
CS348_15195	COG3217	Mosc domain protein beta barrel domain protein
CS348_15195	COG0633	Ferredoxin
CS348_15210	COG0308	aminopeptidase N
CS348_15225	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
CS348_15235	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
CS348_15240	COG3108	Peptidase M15
CS348_15250	COG2989	Protein conserved in bacteria
CS348_15260	COG3095	Involved in chromosome condensation, segregation and cell cycle progression. May participate in facilitating chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division. Probably acts via its interaction with MukB and MukF
CS348_15270	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
CS348_15275	COG1434	Gram-negative-bacterium-type cell wall biogenesis
CS348_15280	COG3173	Aminoglycoside phosphotransferase
CS348_15295	COG3214	Protein conserved in bacteria
CS348_15310	COG2333	competence protein COMEC
CS348_15310	COG0658	competence protein
CS348_15320	COG0539	negative regulation of cytoplasmic translation
CS348_15330	COG0501	Belongs to the peptidase M48B family
CS348_15335	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
CS348_15345	COG2323	membrane
CS348_15350	COG1944	ATP diphosphatase activity
CS348_15355	COG2116	formate transmembrane transporter activity
CS348_15360	COG1882	Formate acetyltransferase
CS348_15370	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
CS348_15375	COG0531	amino acid
CS348_15385	COG3302	dmso reductase anchor subunit
CS348_15390	COG0437	4 iron, 4 sulfur cluster binding
CS348_15395	COG0243	molybdopterin cofactor binding
CS348_15405	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
CS348_15430	COG0492	ferredoxin-NADP+ reductase activity
CS348_15435	COG4988	ABC transporter
CS348_15440	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
CS348_15460	COG0583	DNA-binding transcription factor activity
CS348_15470	COG1335	isochorismatase
CS348_15480	COG0542	response to heat
CS348_15490	COG1278	Cold shock
CS348_15495	COG1136	(ABC) transporter
CS348_15495	COG0577	efflux transmembrane transporter activity
CS348_15500	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
CS348_15505	COG2990	Protein conserved in bacteria
CS348_15510	COG3593	DNA synthesis involved in DNA repair
CS348_15520	COG2431	L-lysine efflux transmembrane transporter activity
CS348_15530	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
CS348_15535	COG0028	Belongs to the TPP enzyme family
CS348_15540	COG2008	Catalyzes the cleavage of L-allo-threonine and L- threonine to glycine and acetaldehyde
CS348_15545	COG0702	epimerase
CS348_15550	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
CS348_15555	COG3023	N-Acetylmuramoyl-L-alanine amidase
CS348_15585	COG2963	transposase activity
CS348_15600	COG3778	Protein conserved in bacteria
CS348_15605	COG3299	homolog of phage Mu protein gp47
CS348_15645	COG4386	tail sheath protein
CS348_15690	COG4626	Terminase
CS348_15690	COG1802	Transcriptional regulator
CS348_15720	COG3179	chitinase
CS348_15735	COG0484	heat shock protein binding
CS348_15815	COG0592	DNA-directed DNA polymerase activity
CS348_15850	COG0582	viral genome integration into host DNA
CS348_15860	COG1126	abc transporter atp-binding protein
CS348_15865	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CS348_15870	COG4215	(ABC) transporter
CS348_15875	COG4160	amino acid transport
CS348_15880	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CS348_15915	COG1177	transmembrane transport
CS348_15920	COG1176	ABC-type spermidine putrescine transport system, permease component I
CS348_15925	COG3842	ATPase activity
CS348_15930	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
CS348_15955	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
CS348_15975	COG3226	Transcriptional regulator
CS348_15980	COG0738	Major facilitator superfamily
CS348_15985	COG0561	phosphatase activity
CS348_15990	COG2814	Major facilitator Superfamily
CS348_15995	COG0671	phosphoesterase, PA-phosphatase related
CS348_16000	COG1349	DNA-binding transcription factor activity
CS348_16005	COG1686	Belongs to the peptidase S11 family
CS348_16010	COG0625	glutathione transferase activity
CS348_16015	COG2133	pyrroloquinoline quinone binding
CS348_16020	COG2133	pyrroloquinoline quinone binding
CS348_16025	COG2610	gluconate transmembrane transporter activity
CS348_16030	COG0583	DNA-binding transcription factor activity
CS348_16040	COG1960	acyl-CoA dehydrogenase activity
CS348_16045	COG3777	bacterial-type RNA polymerase transcription factor activity, metal ion regulated sequence-specific DNA binding
CS348_16060	COG2301	Belongs to the HpcH HpaI aldolase family
CS348_16090	COG0747	negative chemotaxis
CS348_16115	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
CS348_16125	COG0561	phosphatase activity
CS348_16135	COG0488	(ABC) transporter
CS348_16140	COG1376	ErfK ybiS ycfS ynhG family protein
CS348_16145	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
CS348_16150	COG1321	iron dependent repressor
CS348_16160	COG2194	sulfuric ester hydrolase activity
CS348_16165	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
CS348_16180	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CS348_16185	COG0765	amino acid transport
CS348_16190	COG1126	abc transporter atp-binding protein
CS348_16195	COG0668	transmembrane transport
CS348_16205	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
CS348_16215	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
CS348_16225	COG0513	Belongs to the DEAD box helicase family
CS348_16230	COG1309	transcriptional regulator
CS348_16240	COG1131	(ABC) transporter
CS348_16245	COG0842	Transport permease protein
CS348_16250	COG0842	Transport permease protein
CS348_16260	COG3568	Endonuclease Exonuclease Phosphatase
CS348_16265	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
CS348_16270	COG0392	lysyltransferase activity
CS348_16295	COG0670	Belongs to the BI1 family
CS348_16300	COG0314	molybdopterin synthase activity
CS348_16305	COG1977	Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin
CS348_16315	COG0521	Mo-molybdopterin cofactor biosynthetic process
CS348_16375	COG1881	PFAM PEBP family protein
CS348_16405	COG4677	pectinesterase activity
CS348_16415	COG0561	phosphatase activity
CS348_16425	COG4149	molybdate abc transporter
CS348_16430	COG0725	ABC transporter, periplasmic molybdate-binding protein
CS348_16440	COG2005	Transcriptional regulator
CS348_16440	COG3585	molybdate ion transport
CS348_16450	COG1119	ATPase activity
CS348_16475	COG2017	converts alpha-aldose to the beta-anomer
CS348_16490	COG1120	ATPase activity
CS348_16495	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CS348_16500	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
CS348_16510	COG1230	cation diffusion facilitator family transporter
CS348_16565	COG1729	Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division
CS348_16570	COG2885	chlorophyll binding
CS348_16580	COG3064	Membrane
CS348_16585	COG0848	biopolymer transport protein
CS348_16590	COG0811	peptide transport
CS348_16595	COG0824	Thioesterase
CS348_16600	COG3790	cyd operon protein YbgE
CS348_16605	COG4890	Cyd operon protein YbgT
CS348_16610	COG1294	oxidase, subunit
CS348_16615	COG1271	oxidase subunit
CS348_16620	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
CS348_16630	COG0508	dehydrogenase complex catalyzes the overall conversion of
CS348_16635	COG0567	Dehydrogenase, E1 component
CS348_16650	COG2142	Succinate dehydrogenase hydrophobic membrane anchor
CS348_16655	COG2009	succinate dehydrogenase
CS348_16675	COG3180	Ammonia monooxygenase
CS348_16690	COG1984	allophanate hydrolase subunit 2
CS348_16695	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
CS348_16700	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
CS348_16740	COG2156	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit acts as a catalytic chaperone that increases the ATP- binding affinity of the ATP-hydrolyzing subunit KdpB by the formation of a transient KdpB KdpC ATP ternary complex
CS348_16745	COG2205	protein histidine kinase activity
CS348_16750	COG0745	RESPONSE REGULATOR receiver
CS348_16755	COG1982	Orn Lys Arg decarboxylase major
CS348_16760	COG0531	amino acid
CS348_16770	COG0033	Phosphoglucomutase
CS348_16780	COG0596	Alpha beta hydrolase
CS348_16795	COG0735	belongs to the Fur family
CS348_16800	COG0583	DNA-binding transcription factor activity
CS348_16805	COG1053	succinate dehydrogenase
CS348_16815	COG0477	Major facilitator Superfamily
CS348_16845	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
CS348_16850	COG1940	carbohydrate kinase activity
CS348_16850	COG1846	Transcriptional regulator
CS348_16855	COG0647	UMP catabolic process
CS348_16860	COG0367	asparagine synthase
CS348_16900	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
CS348_16910	COG1702	phosphate starvation-inducible protein PhoH
CS348_16920	COG4535	Mg2 and Co2 transporter CorC
CS348_16940	COG0765	amino acid transport
CS348_16945	COG0765	amino acid transport
CS348_16950	COG1126	abc transporter atp-binding protein
CS348_16960	COG2888	peptidyl-tyrosine sulfation
CS348_16965	COG3829	transcription factor binding
CS348_16965	COG3290	protein histidine kinase activity
CS348_16995	COG1466	dna polymerase III delta subunit
CS348_17005	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
CS348_17015	COG0799	negative regulation of ribosome biogenesis
CS348_17025	COG0768	penicillin binding
CS348_17030	COG0772	Belongs to the SEDS family
CS348_17035	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
CS348_17040	COG1686	Belongs to the peptidase S11 family
CS348_17055	COG0583	DNA-binding transcription factor activity
CS348_17070	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
CS348_17080	COG1278	Cold shock
CS348_17095	COG3069	C4-dicarboxylate transmembrane transporter activity
CS348_17100	COG4565	transcriptional regulatory protein
CS348_17105	COG3290	protein histidine kinase activity
CS348_17115	COG3053	Acetylation of prosthetic group (2-(5''-phosphoribosyl)- 3'-dephosphocoenzyme-A) of the gamma subunit of citrate lyase
CS348_17120	COG3052	prosthetic group binding
CS348_17125	COG2301	Belongs to the HpcH HpaI aldolase family
CS348_17130	COG3051	citrate lyase alpha subunit
CS348_17145	COG0471	metal ion transport
CS348_17150	COG3719	Belongs to the RNase T2 family
CS348_17160	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
CS348_17165	COG1063	alcohol dehydrogenase
CS348_17170	COG0589	response to stress
CS348_17185	COG0243	molybdopterin cofactor binding
CS348_17200	COG0450	alkyl hydroperoxide reductase
CS348_17205	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
CS348_17215	COG0583	DNA-binding transcription factor activity
CS348_17220	COG3969	phosphoadenosine phosphosulfate
CS348_17225	COG1475	DNA binding
CS348_17230	COG0436	Aminotransferase
CS348_17235	COG0371	Dehydrogenase
CS348_17240	COG2879	small protein
CS348_17245	COG1966	Carbon starvation protein
CS348_17255	COG1028	Short-chain dehydrogenase reductase Sdr
CS348_17260	COG1535	isochorismatase
CS348_17260	COG3433	isochorismatase activity
CS348_17265	COG1021	2,3-dihydroxybenzoate-AMP ligase
CS348_17270	COG1169	isochorismate synthase
CS348_17275	COG4592	Periplasmic binding protein
CS348_17285	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CS348_17290	COG4779	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CS348_17295	COG1120	ATPase activity
CS348_17300	COG3765	Modulates the polysaccharide chain length of enterobacterial common antigen (ECA)
CS348_17305	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
CS348_17305	COG3319	amino acid activation for nonribosomal peptide biosynthetic process
CS348_17310	COG3251	PFAM MbtH domain protein
CS348_17315	COG2382	esterase
CS348_17320	COG4771	TonB-dependent receptor
CS348_17325	COG2977	Belongs to the P-Pant transferase superfamily
CS348_17350	COG2315	Protein conserved in bacteria
CS348_17370	COG1113	amino acid transport
CS348_17380	COG3059	membrane
CS348_17390	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
CS348_17395	COG2207	Transcriptional regulator
CS348_17400	COG3696	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
CS348_17405	COG5002	protein histidine kinase activity
CS348_17445	COG2963	transposase activity
CS348_17455	COG5301	cellulose 1,4-beta-cellobiosidase activity
CS348_17455	COG5301	cellulose 1,4-beta-cellobiosidase activity
CS348_17525	COG0740	serine-type endopeptidase activity
CS348_17570	COG3772	lysozyme
CS348_17585	COG0484	heat shock protein binding
CS348_17665	COG0582	viral genome integration into host DNA
CS348_17740	COG2501	S4 domain
CS348_17765	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
CS348_17780	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
CS348_17785	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
CS348_17805	COG1464	Belongs to the NlpA lipoprotein family
CS348_17815	COG3127	ABC-type transport system involved in lysophospholipase L1, biosynthesis, permease component
CS348_17820	COG4181	ATPase activity
CS348_17825	COG2755	lipolytic protein G-D-S-L family
CS348_17830	COG0300	oxidoreductase activity
CS348_17835	COG3118	belongs to the thioredoxin family
CS348_17840	COG0390	transport system, permease component
CS348_17845	COG4619	ABC transporter
CS348_17850	COG0330	HflC and HflK could
CS348_17855	COG1585	Membrane protein implicated in regulation of membrane protease activity
CS348_17865	COG2217	Heavy metal translocating P-type atpase
CS348_17875	COG3735	TraB family
CS348_17890	COG2223	nitrite transmembrane transporter activity
CS348_17895	COG4651	solute:proton antiporter activity
CS348_17895	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
CS348_17900	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
CS348_17955	COG2832	Protein of unknown function (DUF454)
CS348_17960	COG3923	Primosomal replication protein n
CS348_17975	COG1196	nuclear chromosome segregation
CS348_17975	COG3264	Mechanosensitive ion channel
CS348_17980	COG1309	transcriptional regulator
CS348_17985	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
CS348_17990	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
CS348_18005	COG0110	maltose O-acetyltransferase activity
CS348_18025	COG4943	cyclic-guanylate-specific phosphodiesterase activity
CS348_18035	COG3695	enzyme binding
CS348_18040	COG3126	Type III secretion system lipoprotein chaperone (YscW)
CS348_18045	COG1946	Acyl-CoA thioesterase
CS348_18050	COG0004	ammonium transporteR
CS348_18055	COG0347	Belongs to the P(II) protein family
CS348_18060	COG1132	(ABC) transporter
CS348_18065	COG1132	(ABC) transporter
CS348_18070	COG1522	sequence-specific DNA binding
CS348_18085	COG4533	DNA binding
CS348_18095	COG0824	Thioesterase
CS348_18100	COG1555	photosystem II stabilization
CS348_18105	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
CS348_18110	COG0776	regulation of translation
CS348_18115	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
CS348_18140	COG0271	Belongs to the BolA IbaG family
CS348_18150	COG3056	Lipoprotein
CS348_18155	COG2223	nitrite transmembrane transporter activity
CS348_18160	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
CS348_18165	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
CS348_18170	COG1845	cytochrome c oxidase, subunit III
CS348_18175	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
CS348_18185	COG2814	Major facilitator Superfamily
CS348_18225	COG3842	ATPase activity
CS348_18250	COG0142	geranyltranstransferase activity
CS348_18260	COG0667	Aldo Keto reductase
CS348_18265	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
CS348_18285	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
CS348_18285	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
CS348_18295	COG4238	major outer membrane lipoprotein
CS348_18300	COG3248	Nucleoside-binding outer membrane protein
CS348_18315	COG1403	HNH endonuclease
CS348_18320	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
CS348_18330	COG1862	Preprotein translocase
CS348_18355	COG0450	alkyl hydroperoxide reductase
CS348_18360	COG0366	Alpha amylase catalytic
CS348_18370	COG1114	Component of the transport system for branched-chain amino acids
CS348_18375	COG5002	protein histidine kinase activity
CS348_18385	COG0420	3'-5' exonuclease activity
CS348_18390	COG0419	ATPase involved in DNA repair
CS348_18395	COG2814	Major facilitator Superfamily
CS348_18400	COG1940	carbohydrate kinase activity
CS348_18415	COG4126	flavin adenine dinucleotide binding
CS348_18435	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
CS348_18440	COG3706	GGDEF domain
CS348_18470	COG1181	Belongs to the D-alanine--D-alanine ligase family
CS348_18490	COG1133	In Escherichia coli SbmA is involved in uptake of microcin J25
CS348_18500	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
CS348_18515	COG0113	porphobilinogen synthase activity
CS348_18550	COG1280	lysine exporter protein (LysE YggA)
CS348_18570	COG1294	oxidase, subunit
CS348_18575	COG1271	oxidase subunit
CS348_18595	COG2814	Major facilitator Superfamily
CS348_18605	COG0789	Transcriptional regulator
CS348_18625	COG1538	Outer membrane efflux protein
CS348_18660	COG2200	EAL domain
CS348_18690	COG3539	Fimbrial protein
CS348_18695	COG3121	Chaperone
CS348_18700	COG3188	usher protein
CS348_18735	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
CS348_18755	COG2195	Cleaves the N-terminal amino acid of tripeptides
CS348_18760	COG1186	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
CS348_18765	COG1690	Belongs to the RtcB family
CS348_18775	COG3034	peptidoglycan biosynthetic process
CS348_18780	COG0121	glutamine amidotransferase
CS348_18795	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
CS348_18830	COG1522	sequence-specific DNA binding
CS348_18845	COG0270	DNA (cytosine-5-)-methyltransferase activity
CS348_18890	COG3299	homolog of phage Mu protein gp47
CS348_18900	COG4384	Bacteriophage Mu Gp45 protein
CS348_18910	COG4228	DNA circulation
CS348_18975	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
CS348_18985	COG2226	methyltransferase
CS348_18995	COG1388	LysM domain
CS348_18995	COG0741	lytic transglycosylase activity
CS348_19000	COG2226	methyltransferase
CS348_19010	COG2814	Major facilitator Superfamily
CS348_19015	COG0583	DNA-binding transcription factor activity
CS348_19020	COG0656	L-ascorbic acid biosynthetic process
CS348_19055	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
CS348_19080	COG1720	tRNA m6t6A37 methyltransferase activity
CS348_19090	COG3015	lipoprotein NlpE involved in copper resistance
CS348_19095	COG1186	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
CS348_19100	COG4681	YaeQ
CS348_19110	COG4568	rho-dependent transcription termination
CS348_19120	COG0346	lactoylglutathione lyase activity
CS348_19185	COG0575	Belongs to the CDS family
CS348_19235	COG0024	Methionine aminopeptidase
CS348_19255	COG0477	Major facilitator Superfamily
CS348_19270	COG3835	regulator
CS348_19295	COG2860	membrane
CS348_19320	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
CS348_19325	COG1120	ATPase activity
CS348_19330	COG4774	siderophore transport
CS348_19335	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
CS348_19340	COG1643	Atp-dependent helicase
CS348_19345	COG1514	Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester
CS348_19355	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
CS348_19365	COG0617	tRNA 3'-terminal CCA addition
CS348_19370	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
CS348_19380	COG3121	Chaperone
CS348_19385	COG3188	usher protein
CS348_19390	COG3539	Fimbrial protein
CS348_19395	COG3539	Fimbrial protein
CS348_19400	COG3539	Fimbrial protein
CS348_19405	COG3539	Fimbrial protein
CS348_19410	COG0413	3-methyl-2-oxobutanoate hydroxymethyltransferase activity
CS348_19430	COG0726	polysaccharide deacetylase
CS348_19435	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
CS348_19455	COG0842	Transport permease protein
CS348_19460	COG1131	(ABC) transporter
CS348_19465	COG0288	reversible hydration of carbon dioxide
CS348_19475	COG4993	Dehydrogenase
CS348_19500	COG1349	DNA-binding transcription factor activity
CS348_19530	COG3064	Membrane
CS348_19545	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
CS348_19550	COG0508	dehydrogenase complex catalyzes the overall conversion of
CS348_19555	COG2609	component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2)
CS348_19565	COG2186	Transcriptional regulator
CS348_19570	COG1113	amino acid transport
CS348_19575	COG2211	Major facilitator Superfamily
CS348_19580	COG3940	Belongs to the glycosyl hydrolase 43 family
CS348_19585	COG3725	Membrane protein required for beta-lactamase induction
CS348_19605	COG4969	Belongs to the N-Me-Phe pilin family
CS348_19610	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
CS348_19615	COG1459	type II secretion system
CS348_19625	COG0237	dephospho-CoA kinase activity
CS348_19650	COG0494	nUDIX hydrolase
CS348_19670	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
CS348_19675	COG0849	cell division
CS348_19685	COG1181	Belongs to the D-alanine--D-alanine ligase family
CS348_19700	COG0772	Belongs to the SEDS family
CS348_19715	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
CS348_19725	COG0768	penicillin binding
CS348_19745	COG1609	Transcriptional regulator
CS348_19755	COG0028	Belongs to the TPP enzyme family
CS348_19800	COG4143	(ABC) transporter
CS348_19805	COG1178	ABC-type Fe3 transport system permease component
CS348_19810	COG3840	Part of the ABC transporter complex ThiBPQ involved in thiamine import. Responsible for energy coupling to the transport system
CS348_19815	COG0586	Pfam SNARE associated Golgi protein
CS348_19855	COG0417	DNA replication proofreading
CS348_19885	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
CS348_19960	COG2271	Major facilitator Superfamily
CS348_19970	COG0644	oxidoreductase
CS348_20085	COG5016	pyruvate
CS348_20085	COG0511	ligase activity, forming carbon-carbon bonds
CS348_20120	COG1047	Peptidyl-prolyl cis-trans
CS348_20135	COG0196	riboflavin kinase activity
CS348_20160	COG0583	DNA-binding transcription factor activity
CS348_20180	COG0641	radical SAM
CS348_20185	COG3119	arylsulfatase activity
CS348_20195	COG0737	Belongs to the 5'-nucleotidase family
CS348_20210	COG0583	DNA-binding transcription factor activity
CS348_20230	COG3121	Chaperone
CS348_20235	COG3539	Fimbrial protein
CS348_20250	COG3188	usher protein
CS348_20260	COG3539	Fimbrial protein
CS348_20315	COG4735	regulation of single-species biofilm formation
CS348_20320	COG1584	GPR1 FUN34 yaaH family protein
CS348_20325	COG0521	Mo-molybdopterin cofactor biosynthetic process
CS348_20335	COG1115	amino acid carrier protein
CS348_20345	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
CS348_20355	COG0527	aspartate kinase activity
CS348_20355	COG0460	homoserine dehydrogenase
CS348_20365	COG0565	Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA
CS348_20375	COG0745	RESPONSE REGULATOR receiver
CS348_20395	COG3121	Chaperone
CS348_20415	COG4452	Inner membrane protein CreD
CS348_20420	COG2205	protein histidine kinase activity
CS348_20425	COG0745	RESPONSE REGULATOR receiver
CS348_20430	COG3045	CreA protein
CS348_20435	COG2207	Transcriptional regulator
CS348_20435	COG3708	Transcriptional regulator
CS348_20465	COG0488	(ABC) transporter
CS348_20480	COG0560	Phosphoserine phosphatase
CS348_20490	COG3726	membrane protein affecting hemolysin expression
CS348_20505	COG3539	Fimbrial protein
CS348_20510	COG3121	Chaperone
CS348_20630	COG2369	cell adhesion
CS348_20640	COG4373	Mu-like prophage FluMu protein gp28
CS348_20720	COG3267	Type II secretory pathway component ExeA
CS348_20720	COG3409	Peptidoglycan-binding domain 1 protein
CS348_20805	COG1328	CTP reductase activity
CS348_20810	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
CS348_20815	COG0084	hydrolase, TatD family'
CS348_20820	COG4667	esterase of the alpha-beta hydrolase superfamily
CS348_20830	COG2823	Periplasmic or secreted lipoprotein
CS348_20840	COG1011	Hydrolase
CS348_20850	COG3050	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. The exact function of the psi subunit is
CS348_20880	COG3706	GGDEF domain
CS348_20885	COG4114	ferric iron reductase
CS348_20890	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
CS348_20895	COG2197	response regulator
CS348_20900	COG2197	response regulator
CS348_20905	COG2966	Psort location CytoplasmicMembrane, score
CS348_20920	COG1484	DNA-dependent DNA replication
CS348_20940	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
CS348_20945	COG3716	PTS system mannose fructose sorbose family IID component
CS348_20950	COG3715	PTS system
CS348_20955	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
CS348_20970	COG0840	transmembrane signaling receptor activity
CS348_20975	COG1966	Carbon starvation protein
CS348_20980	COG2879	small protein
CS348_20985	COG0523	cobalamin synthesis protein
CS348_20995	COG1280	lysine exporter protein (LysE YggA)
CS348_21000	COG3586	endonuclease activity
CS348_21015	COG1012	belongs to the aldehyde dehydrogenase family
CS348_21020	COG5464	transposase or invertase
CS348_21025	COG2814	Major facilitator Superfamily
CS348_21030	COG2733	membrane
CS348_21035	COG0477	Major facilitator Superfamily
CS348_21040	COG3366	ferrous iron transmembrane transporter activity
CS348_21045	COG0700	Nucleoside recognition
CS348_21050	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
CS348_21055	COG0583	DNA-binding transcription factor activity
CS348_21080	COG2186	Transcriptional regulator
CS348_21090	COG0412	Dienelactone hydrolase
CS348_21115	COG3811	Belongs to the UPF0386 family
CS348_21120	COG2519	Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA
CS348_21165	COG1064	alcohol dehydrogenase
CS348_21170	COG3265	gluconokinase activity
CS348_21175	COG1063	alcohol dehydrogenase
CS348_21180	COG1028	Short-chain dehydrogenase reductase Sdr
CS348_21185	COG2610	gluconate transmembrane transporter activity
CS348_21190	COG1609	Transcriptional regulator
CS348_21195	COG0795	lipopolysaccharide-transporting ATPase activity
CS348_21200	COG0795	lipopolysaccharide-transporting ATPase activity
CS348_21220	COG2927	DNA polymerase III (CHI subunit)
CS348_21250	COG3076	Globally modulates RNA abundance by binding to RNase E (Rne) and regulating its endonucleolytic activity. Can modulate Rne action in a substrate-dependent manner by altering the composition of the degradosome
CS348_21260	COG2731	YhcH YjgK YiaL family protein
CS348_21285	COG1288	antiporter activity
CS348_21290	COG1438	arginine binding
CS348_21335	COG1263	PTS System
CS348_21335	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
CS348_21340	COG0366	Alpha amylase catalytic
CS348_21355	COG2026	Addiction module toxin, RelE StbE family
CS348_21360	COG3077	Addiction module antitoxin, RelB DinJ family
CS348_21365	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
CS348_21365	COG3711	transcriptional antiterminator
CS348_21380	COG3964	amidohydrolase
CS348_21410	COG3783	Cytochrome b(562)
CS348_21415	COG0312	modulator of DNA gyrase
CS348_21425	COG1082	Xylose isomerase domain protein TIM barrel
CS348_21435	COG2814	Major facilitator Superfamily
CS348_21440	COG0673	inositol 2-dehydrogenase activity
CS348_21445	COG3962	Belongs to the TPP enzyme family
CS348_21450	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
CS348_21460	COG1082	Xylose isomerase domain protein TIM barrel
CS348_21465	COG5520	Belongs to the glycosyl hydrolase 30 family
CS348_21495	COG3718	enzyme involved in inositol metabolism
CS348_21500	COG2814	Major facilitator Superfamily
CS348_21500	COG0477	Major facilitator Superfamily
CS348_21510	COG0477	Major facilitator Superfamily
CS348_21510	COG2814	Major facilitator Superfamily
CS348_21515	COG0837	glucose binding
CS348_21515	COG1737	Transcriptional regulator
CS348_21525	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
CS348_21535	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
CS348_21540	COG3964	amidohydrolase
CS348_21545	COG2271	Major facilitator Superfamily
CS348_21550	COG2105	PFAM AIG2 family protein
CS348_21570	COG1253	flavin adenine dinucleotide binding
CS348_21585	COG3054	Bacterial protein of unknown function (YtfJ_HI0045)
CS348_21605	COG1733	regulation of RNA biosynthetic process
CS348_21610	COG0702	epimerase
CS348_21615	COG0697	spore germination
CS348_21625	COG1113	amino acid transport
CS348_21630	COG0545	Peptidyl-prolyl cis-trans isomerase
CS348_21635	COG3061	Opacity-associated protein A
CS348_21675	COG3477	response to acidic pH
CS348_21705	COG3037	sugar-specific permease SgaT UlaA
CS348_21720	COG1073	alpha beta
CS348_21725	COG3650	response to hydrogen peroxide
CS348_21735	COG1960	acyl-CoA dehydrogenase activity
CS348_21740	COG0754	glutathionylspermidine amidase activity
CS348_21745	COG5463	Belongs to the UPF0441 family
CS348_21750	COG3766	membrane
CS348_21760	COG1842	Phage shock protein A
CS348_21765	COG3789	protein conserved in bacteria
CS348_21775	COG0557	exoribonuclease II activity
CS348_21795	COG3242	Uncharacterized protein conserved in bacteria (DUF2065)
CS348_21800	COG0330	HflC and HflK could
CS348_21805	COG0330	HflC and HflK could
CS348_21810	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
CS348_21835	COG0802	atpase or kinase
CS348_21840	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
CS348_21840	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
CS348_21865	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CS348_21885	COG1511	domain protein
CS348_21885	COG3264	Mechanosensitive ion channel
CS348_21890	COG0531	amino acid
CS348_21900	COG1053	succinate dehydrogenase
CS348_21905	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
CS348_21925	COG2076	Multidrug Resistance protein
CS348_21935	COG5510	response to toxic substance
CS348_21975	COG0531	amino acid
CS348_21980	COG3030	protein affecting phage T7 exclusion by the F plasmid
CS348_21985	COG1027	Aspartate ammonia-lyase
CS348_21990	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
CS348_22005	COG1309	transcriptional regulator
CS348_22020	COG0671	phosphoesterase, PA-phosphatase related
CS348_22110	COG2197	response regulator
CS348_22130	COG3381	protein complex oligomerization
CS348_22135	COG3302	dmso reductase anchor subunit
CS348_22140	COG0437	4 iron, 4 sulfur cluster binding
CS348_22145	COG0243	molybdopterin cofactor binding
CS348_22150	COG3290	protein histidine kinase activity
CS348_22155	COG4565	transcriptional regulatory protein
CS348_22165	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
CS348_22170	COG1838	Catalyzes the reversible hydration of fumarate to (S)- malate
CS348_22170	COG1951	Catalyzes the reversible hydration of fumarate to (S)- malate
CS348_22185	COG2169	Transcriptional regulator
CS348_22190	COG1982	Orn Lys Arg decarboxylase major
CS348_22195	COG2207	Transcriptional regulator
CS348_22200	COG0531	amino acid
CS348_22230	COG2824	Alkylphosphonate utilization operon protein PhnA
CS348_22235	COG2764	glyoxalase bleomycin resistance protein dioxygenase
CS348_22255	COG0790	COG0790 FOG TPR repeat, SEL1 subfamily
CS348_22260	COG1301	dicarboxylic acid transport
CS348_22265	COG4235	cytochrome complex assembly
CS348_22270	COG3088	subunit of a heme lyase
CS348_22275	COG1138	Cytochrome C-type biogenesis protein
CS348_22280	COG3301	Polysulphide reductase, NrfD
CS348_22285	COG0437	4 iron, 4 sulfur cluster binding
CS348_22290	COG3303	Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process
CS348_22305	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
CS348_22310	COG3162	membrane
CS348_22320	COG1346	cytolysis
CS348_22325	COG1380	Effector of murein hydrolase LrgA
CS348_22330	COG0583	DNA-binding transcription factor activity
CS348_22335	COG0025	NhaP-type Na H and K H
CS348_22345	COG2252	PERMEase
CS348_22360	COG0789	Transcriptional regulator
CS348_22370	COG4943	cyclic-guanylate-specific phosphodiesterase activity
CS348_22415	COG0629	single-stranded DNA binding
CS348_22425	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
CS348_22440	COG2315	Protein conserved in bacteria
CS348_22445	COG0432	Pfam Uncharacterised protein family UPF0047
CS348_22450	COG3700	Belongs to the class B bacterial acid phosphatase family
CS348_22460	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
CS348_22465	COG0305	Participates in initiation and elongation during chromosome replication
CS348_22490	COG0735	belongs to the Fur family
CS348_22495	COG3237	CsbD-like
CS348_22505	COG0534	Mate efflux family protein
CS348_22515	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
CS348_22560	COG3833	ABC-type maltose transport systems, permease component
CS348_22565	COG2814	Major facilitator Superfamily
CS348_22565	COG0477	Major facilitator Superfamily
CS348_22575	COG4775	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
CS348_22600	COG0527	aspartate kinase activity
CS348_22620	COG0561	phosphatase activity
CS348_22625	COG1349	DNA-binding transcription factor activity
CS348_22645	COG3122	Protein conserved in bacteria
CS348_22690	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
CS348_22730	COG0151	Belongs to the GarS family
CS348_22755	COG0776	regulation of translation
CS348_22760	COG3068	Protein conserved in bacteria
CS348_22795	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
CS348_22800	COG2104	thiamine diphosphate biosynthetic process
CS348_22865	COG0250	Participates in transcription elongation, termination and antitermination
CS348_22870	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
CS348_22920	COG0812	UDP-N-acetylmuramate dehydrogenase activity
CS348_22990	COG0583	DNA-binding transcription factor activity
CS348_23035	COG2207	Transcriptional regulator
CS348_23045	COG0371	Dehydrogenase
CS348_23060	COG0737	Belongs to the 5'-nucleotidase family
CS348_23080	COG0527	aspartate kinase activity
CS348_23080	COG0460	homoserine dehydrogenase
CS348_23085	COG0626	cystathionine gamma-synthase activity
CS348_23110	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
CS348_23115	COG1609	Transcriptional regulator
CS348_23120	COG3087	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
CS348_23135	COG1575	Belongs to the MenA family. Type 1 subfamily
CS348_23150	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
CS348_23160	COG1494	fructose-1,6-bisphosphatase
CS348_23170	COG3152	Membrane
CS348_23200	COG1879	ABC-type sugar transport system periplasmic component
CS348_23225	COG1070	Carbohydrate kinase
CS348_23245	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
CS348_23255	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
CS348_23260	COG2211	Major facilitator Superfamily
CS348_23335	COG5301	cellulose 1,4-beta-cellobiosidase activity
CS348_23420	COG4695	Portal protein
CS348_23480	COG4974	Belongs to the 'phage' integrase family
CS348_23485	COG3678	ATP-independent chaperone mediated protein folding
CS348_23490	COG0745	RESPONSE REGULATOR receiver
CS348_23495	COG2205	protein histidine kinase activity
CS348_23505	COG2258	MOSC domain
CS348_23510	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
CS348_23520	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
CS348_23530	COG1452	involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane
CS348_23565	COG1454	alcohol dehydrogenase
CS348_23580	COG1296	Branched-chain amino acid permease (Azaleucine resistance)
CS348_23600	COG3383	formate dehydrogenase (NAD+) activity
CS348_23600	COG0243	molybdopterin cofactor binding
CS348_23605	COG3383	formate dehydrogenase (NAD+) activity
CS348_23605	COG0243	molybdopterin cofactor binding
CS348_23610	COG0437	4 iron, 4 sulfur cluster binding
CS348_23615	COG2864	formate dehydrogenase
CS348_23630	COG4737	Cytotoxic translational repressor of toxin-antitoxin stability system
CS348_23640	COG4680	protein conserved in bacteria
CS348_23645	COG5499	transcription regulator containing HTH domain
CS348_23650	COG0456	acetyltransferase
CS348_23665	COG1011	Hydrolase
CS348_23670	COG1349	DNA-binding transcription factor activity
CS348_23675	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
CS348_23685	COG3684	Belongs to the aldolase LacD family
CS348_23695	COG2017	converts alpha-aldose to the beta-anomer
CS348_23700	COG1501	Belongs to the glycosyl hydrolase 31 family
CS348_23745	COG0561	phosphatase activity
CS348_23760	COG0174	glutamine synthetase
CS348_23770	COG3852	Histidine kinase
CS348_23785	COG0635	Involved in the biosynthesis of porphyrin-containing compound
CS348_23815	COG0204	Acyl-transferase
CS348_23830	COG3084	Protein conserved in bacteria
CS348_23835	COG0746	molybdenum cofactor guanylyltransferase activity
CS348_23840	COG1763	Mo-molybdopterin cofactor biosynthetic process
CS348_23885	COG1739	Uncharacterized protein family UPF0029
CS348_23915	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
CS348_23930	COG0805	protein transport
CS348_23940	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
CS348_23960	COG1322	Protein conserved in bacteria
CS348_23965	COG2820	Catalyzes the reversible phosphorylytic cleavage of uridine and deoxyuridine to uracil and ribose- or deoxyribose-1- phosphate. The produced molecules are then utilized as carbon and energy sources or in the rescue of pyrimidine bases for nucleotide synthesis
CS348_23975	COG0641	radical SAM
CS348_23985	COG0583	DNA-binding transcription factor activity
CS348_23990	COG0697	spore germination
CS348_23995	COG0561	phosphatase activity
CS348_24000	COG2267	carboxylic ester hydrolase activity
CS348_24005	COG1280	lysine exporter protein (LysE YggA)
CS348_24020	COG2829	1-acyl-2-lysophosphatidylserine acylhydrolase activity
CS348_24025	COG2050	protein possibly involved in aromatic compounds catabolism
CS348_24060	COG1011	Hydrolase
CS348_24065	COG4973	Belongs to the 'phage' integrase family. XerC subfamily
CS348_24080	COG5567	small periplasmic lipoprotein
CS348_24100	COG3072	Adenylate cyclase
CS348_24115	COG2959	enzyme of heme biosynthesis
CS348_24120	COG3071	HemY protein
CS348_24145	COG1113	amino acid transport
CS348_24165	COG2244	polysaccharide biosynthetic process
CS348_24170	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
CS348_24175	COG0456	acetyltransferase
CS348_24180	COG1209	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
CS348_24185	COG1088	dTDP-glucose 4,6-dehydratase activity
CS348_24190	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
CS348_24205	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
CS348_24215	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
CS348_24220	COG3118	belongs to the thioredoxin family
CS348_24255	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
CS348_24265	COG0583	DNA-binding transcription factor activity
CS348_24295	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
CS348_24300	COG3978	acetolactate synthase activity
CS348_24360	COG2186	Transcriptional regulator
CS348_24365	COG0477	Major facilitator Superfamily
CS348_24370	COG1609	Transcriptional regulator
CS348_24375	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
CS348_24380	COG1879	ABC-type sugar transport system periplasmic component
CS348_24385	COG1172	Belongs to the binding-protein-dependent transport system permease family
CS348_24420	COG1522	sequence-specific DNA binding
CS348_24425	COG0716	FMN binding
CS348_24440	COG3312	ion transport
CS348_24520	COG4533	DNA binding
CS348_24525	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
CS348_24530	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
CS348_24530	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
CS348_24530	COG3925	protein-phosphocysteine-D-fructose-phosphotransferase system transporter activity
CS348_24535	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
CS348_24540	COG0573	inorganic phosphate transmembrane transporter activity
CS348_24545	COG0581	inorganic phosphate transmembrane transporter activity
CS348_24555	COG0704	Plays a role in the regulation of phosphate uptake
CS348_24560	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
CS348_24565	COG2252	PERMEase
CS348_24570	COG0431	NADPH-dependent FMN reductase
CS348_24575	COG2091	lysine biosynthetic process via aminoadipic acid
CS348_24785	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
CS348_24845	COG3188	usher protein
CS348_24850	COG3121	Chaperone
CS348_24870	COG2801	Transposase and inactivated derivatives
CS348_24890	COG0840	transmembrane signaling receptor activity
CS348_24900	COG1475	DNA binding
CS348_24905	COG3969	phosphoadenosine phosphosulfate
CS348_24940	COG1053	succinate dehydrogenase
CS348_24940	COG3976	FMN-binding domain protein
CS348_24945	COG4191	Histidine kinase
CS348_24955	COG0412	Dienelactone hydrolase
CS348_25075	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
CS348_25115	COG0741	lytic transglycosylase activity
CS348_25130	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
CS348_25210	COG2885	chlorophyll binding
CS348_25210	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
CS348_25280	COG5393	Putative Actinobacterial Holin-X, holin superfamily III
CS348_25465	COG3316	Transposase and inactivated derivatives
CS348_25570	COG5302	Post-segregation antitoxin (ccd killing mechanism protein) encoded by the F plasmid
CS348_25605	COG2207	Transcriptional regulator
CS348_25635	COG2801	Transposase and inactivated derivatives
CS348_25645	COG1636	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
CS348_25660	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CS348_25670	COG1120	ATPase activity
CS348_25720	COG1560	Kdo2-lipid A biosynthetic process
CS348_25725	COG2990	Protein conserved in bacteria
CS348_25730	COG0438	transferase activity, transferring glycosyl groups
CS348_25745	COG1943	Transposase
CS348_25755	COG2801	Transposase and inactivated derivatives
CS348_25775	COG3109	RNA chaperone with significant RNA binding, RNA strand exchange and RNA duplexing activities