locus-tag class description E2R47_00005 PF03432 Relaxase/Mobilisation nuclease domain E2R47_00010 PF05713 Bacterial mobilisation protein (MobC) E2R47_00015 PF01815 Rop protein E2R47_00025 PF01051 Initiator Replication protein E2R47_00085 PF13614 AAA domain E2R47_00115 PF06406 StbA protein E2R47_00120 PF05598 Transposase domain (DUF772) E2R47_00120 PF01609 Transposase DDE domain E2R47_00145 PF10502 Signal peptidase, peptidase S26 E2R47_00155 PF06834 TraU protein E2R47_00290 PF05321 Haemolysin expression modulating protein E2R47_00305 PF00665 Integrase core domain E2R47_00305 PF02796 Helix-turn-helix domain of resolvase E2R47_00310 PF01695 IstB-like ATP binding protein E2R47_00330 PF00092 von Willebrand factor type A domain E2R47_00335 PF00092 von Willebrand factor type A domain E2R47_00340 PF02342 TerD domain E2R47_00365 PF15608 PELOTA RNA binding domain E2R47_00365 PF11202 Phosphoribosyl transferase (PRTase) E2R47_00385 PF02342 TerD domain E2R47_00390 PF02342 TerD domain E2R47_00395 PF05099 Tellurite resistance protein TerB E2R47_00400 PF03741 Integral membrane protein TerC family E2R47_00405 PF02342 TerD domain E2R47_00410 PF02342 TerD domain E2R47_00420 PF02342 TerD domain E2R47_00435 PF00665 Integrase core domain E2R47_00440 PF01695 IstB-like ATP binding protein E2R47_00465 PF07804 HipA-like C-terminal domain E2R47_00465 PF13657 HipA N-terminal domain E2R47_00515 PF13610 DDE domain E2R47_00530 PF01636 Phosphotransferase enzyme family E2R47_00535 PF13610 DDE domain E2R47_00555 PF02463 RecF/RecN/SMC N terminal domain E2R47_00580 PF12833 Helix-turn-helix domain E2R47_00605 PF02371 Transposase IS116/IS110/IS902 family E2R47_00605 PF01548 Transposase E2R47_00610 PF13610 DDE domain E2R47_00620 PF00239 Resolvase, N terminal domain E2R47_00620 PF02796 Helix-turn-helix domain of resolvase E2R47_00640 PF07690 Major Facilitator Superfamily E2R47_00645 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2R47_00645 PF03466 LysR substrate binding domain E2R47_00655 PF07690 Major Facilitator Superfamily E2R47_00660 PF13610 DDE domain E2R47_00670 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase E2R47_00685 PF00440 Bacterial regulatory proteins, tetR family E2R47_00685 PF02909 Tetracyclin repressor-like, C-terminal domain E2R47_00690 PF07690 Major Facilitator Superfamily E2R47_00695 PF00892 EamA-like transporter family E2R47_00755 PF00565 Staphylococcal nuclease homologue E2R47_00760 PF18284 DNA methylase N-terminal domain E2R47_00760 PF00145 C-5 cytosine-specific DNA methylase E2R47_00800 PF00809 Pterin binding enzyme E2R47_00810 PF00106 short chain dehydrogenase E2R47_00820 PF13610 DDE domain E2R47_00830 PF13427 Domain of unknown function (DUF4111) E2R47_00830 PF01909 Nucleotidyltransferase domain E2R47_00835 PF13495 Phage integrase, N-terminal SAM-like domain E2R47_00835 PF00589 Phage integrase family E2R47_00840 PF13610 DDE domain E2R47_00855 PF00563 EAL domain E2R47_00855 PF00990 Diguanylate cyclase, GGDEF domain E2R47_00855 PF03707 Bacterial signalling protein N terminal repeat E2R47_00855 PF13188 PAS domain E2R47_00860 PF05052 MerE protein E2R47_00865 PF13411 MerR HTH family regulatory protein E2R47_00870 PF07992 Pyridine nucleotide-disulphide oxidoreductase E2R47_00870 PF00403 Heavy-metal-associated domain E2R47_00870 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain E2R47_00875 PF03203 MerC mercury resistance protein E2R47_00880 PF00403 Heavy-metal-associated domain E2R47_00885 PF02411 MerT mercuric transport protein E2R47_00890 PF00376 MerR family regulatory protein E2R47_00890 PF09278 MerR, DNA binding E2R47_00895 PF02371 Transposase IS116/IS110/IS902 family E2R47_00895 PF01548 Transposase E2R47_00910 PF00809 Pterin binding enzyme E2R47_00915 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I E2R47_00915 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II E2R47_00915 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain E2R47_00915 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III E2R47_00935 PF00239 Resolvase, N terminal domain E2R47_00935 PF02796 Helix-turn-helix domain of resolvase E2R47_00945 PF13610 DDE domain E2R47_00970 PF02522 Aminoglycoside 3-N-acetyltransferase E2R47_00980 PF13610 DDE domain E2R47_00995 PF00905 Penicillin binding protein transpeptidase domain E2R47_00995 PF03717 Penicillin-binding Protein dimerisation domain E2R47_01005 PF02796 Helix-turn-helix domain of resolvase E2R47_01005 PF00239 Resolvase, N terminal domain E2R47_01020 PF01609 Transposase DDE domain E2R47_01020 PF05598 Transposase domain (DUF772) E2R47_01065 PF02796 Helix-turn-helix domain of resolvase E2R47_01065 PF00239 Resolvase, N terminal domain E2R47_01075 PF13610 DDE domain E2R47_01090 PF00186 Dihydrofolate reductase E2R47_01100 PF13610 DDE domain E2R47_01115 PF00717 Peptidase S24-like E2R47_01120 PF11799 impB/mucB/samB family C-terminal domain E2R47_01120 PF13438 Domain of unknown function (DUF4113) E2R47_01120 PF00817 impB/mucB/samB family E2R47_01125 PF13462 Thioredoxin E2R47_01125 PF06965 Na+/H+ antiporter 1 E2R47_01145 PF10411 Disulfide bond isomerase protein N-terminus E2R47_01145 PF13098 Thioredoxin-like domain E2R47_01225 PF08378 Nuclease-related domain E2R47_01300 PF01848 Hok/gef family E2R47_01445 PF00665 Integrase core domain E2R47_01450 PF01695 IstB-like ATP binding protein E2R47_01505 PF05175 Methyltransferase small domain E2R47_01505 PF17827 PrmC N-terminal domain E2R47_01535 PF01051 Initiator Replication protein E2R47_01555 PF13737 Transposase DDE domain E2R47_01565 PF13005 zinc-finger binding domain of transposase IS66 E2R47_01565 PF13007 Transposase C of IS166 homeodomain E2R47_01565 PF13817 IS66 C-terminal element E2R47_01565 PF03050 Transposase IS66 family E2R47_01570 PF05717 IS66 Orf2 like protein E2R47_01590 PF02086 D12 class N6 adenine-specific DNA methyltransferase E2R47_01615 PF00308 Bacterial dnaA protein E2R47_01615 PF08299 Bacterial dnaA protein helix-turn-helix E2R47_01615 PF11638 DnaA N-terminal domain E2R47_01620 PF00712 DNA polymerase III beta subunit, N-terminal domain E2R47_01620 PF02767 DNA polymerase III beta subunit, central domain E2R47_01620 PF02768 DNA polymerase III beta subunit, C-terminal domain E2R47_01625 PF02463 RecF/RecN/SMC N terminal domain E2R47_01630 PF00204 DNA gyrase B E2R47_01630 PF01751 Toprim domain E2R47_01630 PF18053 DNA gyrase B subunit insert domain E2R47_01630 PF00986 DNA gyrase B subunit, carboxyl terminus E2R47_01630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E2R47_01665 PF01627 Hpt domain E2R47_01665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E2R47_01665 PF00672 HAMP domain E2R47_01665 PF00512 His Kinase A (phospho-acceptor) domain E2R47_01665 PF00072 Response regulator receiver domain E2R47_01670 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family E2R47_01675 PF00072 Response regulator receiver domain E2R47_01675 PF00486 Transcriptional regulatory protein, C terminal E2R47_01680 PF03264 NapC/NirT cytochrome c family, N-terminal region E2R47_01685 PF01568 Molydopterin dinucleotide binding domain E2R47_01685 PF18364 Molybdopterin oxidoreductase N-terminal domain E2R47_01685 PF00384 Molybdopterin oxidoreductase E2R47_01690 PF02613 Nitrate reductase delta subunit E2R47_01695 PF03150 Di-haem cytochrome c peroxidase E2R47_01695 PF14376 Haem-binding domain E2R47_01695 PF00034 Cytochrome c E2R47_01700 PF00005 ABC transporter E2R47_01705 PF03379 CcmB protein E2R47_01710 PF01578 Cytochrome C assembly protein E2R47_01715 PF04995 Heme exporter protein D (CcmD) E2R47_01720 PF03100 CcmE E2R47_01725 PF01578 Cytochrome C assembly protein E2R47_01725 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal E2R47_01730 PF08534 Redoxin E2R47_01735 PF03918 Cytochrome C biogenesis protein E2R47_01740 PF12566 Protein of unknown function (DUF3748) E2R47_01740 PF07676 WD40-like Beta Propeller Repeat E2R47_01745 PF07119 Protein of unknown function (DUF1375) E2R47_01750 PF00011 Hsp20/alpha crystallin family E2R47_01755 PF00011 Hsp20/alpha crystallin family E2R47_01760 PF06826 Predicted Permease Membrane Region E2R47_01760 PF02080 TrkA-C domain E2R47_01765 PF02656 Domain of unknown function (DUF202) E2R47_01770 PF02656 Domain of unknown function (DUF202) E2R47_01780 PF00291 Pyridoxal-phosphate dependent enzyme E2R47_01785 PF02447 GntP family permease E2R47_01790 PF03466 LysR substrate binding domain E2R47_01790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2R47_01800 PF07690 Major Facilitator Superfamily E2R47_01810 PF13939 Toxin TisB, type I toxin-antitoxin system E2R47_01820 PF08049 IlvB leader peptide E2R47_01825 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain E2R47_01825 PF00205 Thiamine pyrophosphate enzyme, central domain E2R47_01825 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain E2R47_01830 PF01842 ACT domain E2R47_01835 PF00455 DeoR C terminal sensor domain E2R47_01835 PF08220 DeoR-like helix-turn-helix domain E2R47_01840 PF00294 pfkB family carbohydrate kinase E2R47_01845 PF07690 Major Facilitator Superfamily E2R47_01855 PF00196 Bacterial regulatory proteins, luxR family E2R47_01855 PF00072 Response regulator receiver domain E2R47_01860 PF05231 MASE1 E2R47_01860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E2R47_01860 PF07730 Histidine kinase E2R47_01865 PF07690 Major Facilitator Superfamily E2R47_01870 PF07690 Major Facilitator Superfamily E2R47_01880 PF06711 Protein of unknown function (DUF1198) E2R47_01890 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 E2R47_01890 PF08279 HTH domain E2R47_01890 PF00874 PRD domain E2R47_01890 PF05043 Mga helix-turn-helix domain E2R47_01895 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit E2R47_01900 PF03611 PTS system sugar-specific permease component E2R47_01910 PF01116 Fructose-bisphosphate aldolase class-II E2R47_01930 PF07690 Major Facilitator Superfamily E2R47_01935 PF00232 Glycosyl hydrolase family 1 E2R47_01945 PF00874 PRD domain E2R47_01945 PF00158 Sigma-54 interaction domain E2R47_01955 PF03610 PTS system fructose IIA component E2R47_01955 PF03830 PTS system sorbose subfamily IIB component E2R47_01960 PF03609 PTS system sorbose-specific iic component E2R47_01965 PF03613 PTS system mannose/fructose/sorbose family IID component E2R47_01970 PF03841 L-seryl-tRNA selenium transferase E2R47_01975 PF07071 KDGP aldolase E2R47_01980 PF04754 Putative transposase, YhgA-like E2R47_01985 PF00892 EamA-like transporter family E2R47_01990 PF02308 MgtC family E2R47_01995 PF00690 Cation transporter/ATPase, N-terminus E2R47_01995 PF00689 Cation transporting ATPase, C-terminus E2R47_02010 PF00857 Isochorismatase family E2R47_02020 PF00486 Transcriptional regulatory protein, C terminal E2R47_02030 PF03797 Autotransporter beta-domain E2R47_02035 PF00196 Bacterial regulatory proteins, luxR family E2R47_02055 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain E2R47_02055 PF02753 Pili assembly chaperone PapD, C-terminal domain E2R47_02060 PF00577 Outer membrane usher protein E2R47_02060 PF13953 PapC C-terminal domain E2R47_02060 PF13954 PapC N-terminal domain E2R47_02070 PF00419 Fimbrial protein E2R47_02080 PF00419 Fimbrial protein E2R47_02100 PF13802 Galactose mutarotase-like E2R47_02100 PF01055 Glycosyl hydrolases family 31 E2R47_02105 PF05170 AsmA family E2R47_02110 PF00860 Permease family E2R47_02115 PF03616 Sodium/glutamate symporter E2R47_02125 PF00271 Helicase conserved C-terminal domain E2R47_02125 PF17191 RecG wedge domain E2R47_02125 PF00270 DEAD/DEAH box helicase E2R47_02130 PF00588 SpoU rRNA Methylase family E2R47_02130 PF12105 SpoU, rRNA methylase, C-terminal E2R47_02135 PF02824 TGS domain E2R47_02135 PF04607 Region found in RelA / SpoT proteins E2R47_02135 PF13291 ACT domain E2R47_02140 PF01192 RNA polymerase Rpb6 E2R47_02145 PF00625 Guanylate kinase E2R47_02150 PF03120 NAD-dependent DNA ligase OB-fold domain E2R47_02150 PF01653 NAD-dependent DNA ligase adenylation domain E2R47_02155 PF03458 UPF0126 domain E2R47_02170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2R47_02170 PF03466 LysR substrate binding domain E2R47_02175 PF08340 Domain of unknown function (DUF1732) E2R47_02175 PF03755 YicC-like family, N-terminal region E2R47_02180 PF03725 3' exoribonuclease family, domain 2 E2R47_02180 PF01138 3' exoribonuclease family, domain 1 E2R47_02185 PF00156 Phosphoribosyl transferase domain E2R47_02190 PF00440 Bacterial regulatory proteins, tetR family E2R47_02195 PF00692 dUTPase E2R47_02200 PF04127 DNA / pantothenate metabolism flavoprotein E2R47_02200 PF02441 Flavoprotein E2R47_02205 PF04002 RadC-like JAB domain E2R47_02210 PF00830 Ribosomal L28 family E2R47_02215 PF00471 Ribosomal protein L33 E2R47_02220 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain E2R47_02220 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain E2R47_02220 PF06827 Zinc finger found in FPG and IleRS E2R47_02225 PF01467 Cytidylyltransferase-like E2R47_02230 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) E2R47_02235 PF01075 Glycosyltransferase family 9 (heptosyltransferase) E2R47_02240 PF00534 Glycosyl transferases group 1 E2R47_02240 PF13439 Glycosyltransferase Family 4 E2R47_02260 PF13439 Glycosyltransferase Family 4 E2R47_02260 PF00534 Glycosyl transferases group 1 E2R47_02265 PF08437 Glycosyl transferase family 8 C-terminal E2R47_02265 PF01501 Glycosyl transferase family 8 E2R47_02270 PF08437 Glycosyl transferase family 8 C-terminal E2R47_02270 PF01501 Glycosyl transferase family 8 E2R47_02275 PF06176 Lipopolysaccharide core biosynthesis protein (WaaY) E2R47_02285 PF00534 Glycosyl transferases group 1 E2R47_02290 PF04932 O-Antigen ligase E2R47_02295 PF01075 Glycosyltransferase family 9 (heptosyltransferase) E2R47_02300 PF01075 Glycosyltransferase family 9 (heptosyltransferase) E2R47_02305 PF01370 NAD dependent epimerase/dehydratase family E2R47_02310 PF00155 Aminotransferase class I and II E2R47_02315 PF00107 Zinc-binding dehydrogenase E2R47_02315 PF08240 Alcohol dehydrogenase GroES-like domain E2R47_02320 PF00535 Glycosyl transferase family 2 E2R47_02325 PF04748 Divergent polysaccharide deacetylase E2R47_02330 PF01551 Peptidase family M23 E2R47_02335 PF01676 Metalloenzyme superfamily E2R47_02335 PF06415 BPG-independent PGAM N-terminus (iPGM_N) E2R47_02340 PF00581 Rhodanese-like domain E2R47_02345 PF00462 Glutaredoxin E2R47_02350 PF02556 Preprotein translocase subunit SecB E2R47_02355 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus E2R47_02355 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus E2R47_02360 PF06426 Serine acetyltransferase, N-terminal E2R47_02360 PF00132 Bacterial transferase hexapeptide (six repeats) E2R47_02365 PF07690 Major Facilitator Superfamily E2R47_02370 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain E2R47_02370 PF13378 Enolase C-terminal domain-like E2R47_02375 PF00356 Bacterial regulatory proteins, lacI family E2R47_02380 PF00588 SpoU rRNA Methylase family E2R47_02385 PF01070 FMN-dependent dehydrogenase E2R47_02390 PF00392 Bacterial regulatory proteins, gntR family E2R47_02390 PF07729 FCD domain E2R47_02395 PF02652 L-lactate permease E2R47_02400 PF05662 Coiled stalk of trimeric autotransporter adhesin E2R47_02400 PF05658 Head domain of trimeric autotransporter adhesin E2R47_02400 PF13018 Extended Signal Peptide of Type V secretion system E2R47_02400 PF03895 YadA-like membrane anchor domain E2R47_02405 PF11622 Protein of unknown function (DUF3251) E2R47_02410 PF10928 Protein of unknown function (DUF2810) E2R47_02420 PF05068 Mannitol repressor E2R47_02425 PF08125 Mannitol dehydrogenase C-terminal domain E2R47_02425 PF01232 Mannitol dehydrogenase Rossmann domain E2R47_02430 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 E2R47_02430 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit E2R47_02430 PF02378 Phosphotransferase system, EIIC E2R47_02440 PF11742 Protein of unknown function (DUF3302) E2R47_02445 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion E2R47_02445 PF00529 HlyD membrane-fusion protein of T1SS E2R47_02450 PF00043 Glutathione S-transferase, C-terminal domain E2R47_02450 PF13417 Glutathione S-transferase, N-terminal domain E2R47_02455 PF03841 L-seryl-tRNA selenium transferase E2R47_02455 PF12390 Selenocysteine synthase N terminal E2R47_02460 PF09106 Elongation factor SelB, winged helix E2R47_02460 PF09107 Elongation factor SelB, winged helix E2R47_02460 PF03144 Elongation factor Tu domain 2 E2R47_02460 PF00009 Elongation factor Tu GTP binding domain E2R47_02465 PF00480 ROK family E2R47_02470 PF00171 Aldehyde dehydrogenase family E2R47_02480 PF07944 Beta-L-arabinofuranosidase, GH127 E2R47_02490 PF00596 Class II Aldolase and Adducin N-terminal domain E2R47_02495 PF01261 Xylose isomerase-like TIM barrel E2R47_02500 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family E2R47_02505 PF00370 FGGY family of carbohydrate kinases, N-terminal domain E2R47_02505 PF02782 FGGY family of carbohydrate kinases, C-terminal domain E2R47_02510 PF03480 Bacterial extracellular solute-binding protein, family 7 E2R47_02515 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component E2R47_02520 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component E2R47_02525 PF16154 Domain of unknown function (DUF4862) E2R47_02530 PF04074 YhcH/YjgK/YiaL E2R47_02535 PF02615 Malate/L-lactate dehydrogenase E2R47_02540 PF09339 IclR helix-turn-helix domain E2R47_02540 PF01614 Bacterial transcriptional regulator E2R47_02545 PF13247 4Fe-4S dicluster domain E2R47_02550 PF00155 Aminotransferase class I and II E2R47_02555 PF00128 Alpha amylase, catalytic domain E2R47_02560 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase E2R47_02565 PF12833 Helix-turn-helix domain E2R47_02580 PF02782 FGGY family of carbohydrate kinases, C-terminal domain E2R47_02580 PF00370 FGGY family of carbohydrate kinases, N-terminal domain E2R47_02585 PF05360 yiaA/B two helix domain E2R47_02590 PF01757 Acyltransferase family E2R47_02600 PF13983 YsaB-like lipoprotein E2R47_02605 PF02091 Glycyl-tRNA synthetase alpha subunit E2R47_02610 PF02092 Glycyl-tRNA synthetase beta subunit E2R47_02610 PF05746 DALR anticodon binding domain E2R47_02615 PF00665 Integrase core domain E2R47_02615 PF13333 Integrase core domain E2R47_02615 PF13276 HTH-like domain E2R47_02620 PF07690 Major Facilitator Superfamily E2R47_02625 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain E2R47_02625 PF13378 Enolase C-terminal domain-like E2R47_02630 PF03466 LysR substrate binding domain E2R47_02630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2R47_02635 PF01810 LysE type translocator E2R47_02655 PF00313 'Cold-shock' DNA-binding domain E2R47_02660 PF01381 Helix-turn-helix E2R47_02665 PF11254 Protein of unknown function (DUF3053) E2R47_02670 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain E2R47_02670 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain E2R47_02675 PF00691 OmpA family E2R47_02675 PF13488 Glycine zipper E2R47_02680 PF01568 Molydopterin dinucleotide binding domain E2R47_02680 PF18364 Molybdopterin oxidoreductase N-terminal domain E2R47_02680 PF00384 Molybdopterin oxidoreductase E2R47_02685 PF00583 Acetyltransferase (GNAT) family E2R47_02690 PF03352 Methyladenine glycosylase E2R47_02695 PF03797 Autotransporter beta-domain E2R47_02700 PF08019 Phosphoethanolamine transferase EptA/EptB E2R47_02700 PF00884 Sulfatase E2R47_02715 PF00356 Bacterial regulatory proteins, lacI family E2R47_02725 PF00860 Permease family E2R47_02730 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle E2R47_02735 PF00528 Binding-protein-dependent transport system inner membrane component E2R47_02740 PF12911 N-terminal TM domain of oligopeptide transport permease C E2R47_02740 PF00528 Binding-protein-dependent transport system inner membrane component E2R47_02745 PF08352 Oligopeptide/dipeptide transporter, C-terminal region E2R47_02745 PF00005 ABC transporter E2R47_02750 PF08352 Oligopeptide/dipeptide transporter, C-terminal region E2R47_02750 PF00005 ABC transporter E2R47_02755 PF03222 Tryptophan/tyrosine permease family E2R47_02765 PF13940 Toxin Ldr, type I toxin-antitoxin system E2R47_02770 PF11658 Cellulose biosynthesis protein BcsG E2R47_02775 PF11120 Cellulose biosynthesis protein BcsF E2R47_02780 PF10995 Cellulose biosynthesis GIL E2R47_02785 PF10945 Cellulose biosynthesis protein BcsR E2R47_02790 PF06564 Cellulose biosynthesis protein BcsQ E2R47_02795 PF03552 Cellulose synthase E2R47_02795 PF07238 PilZ domain E2R47_02795 PF00535 Glycosyl transferase family 2 E2R47_02800 PF03170 Bacterial cellulose synthase subunit E2R47_02805 PF01270 Glycosyl hydrolases family 8 E2R47_02810 PF13176 Tetratricopeptide repeat E2R47_02810 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) E2R47_02820 PF00672 HAMP domain E2R47_02820 PF00990 Diguanylate cyclase, GGDEF domain E2R47_02820 PF17154 Gammaproteobacterial periplasmic sensor domain E2R47_02820 PF00563 EAL domain E2R47_02825 PF00375 Sodium:dicarboxylate symporter family E2R47_02830 PF00675 Insulinase (Peptidase family M16) E2R47_02830 PF05193 Peptidase M16 inactive domain E2R47_02835 PF00294 pfkB family carbohydrate kinase E2R47_02840 PF00563 EAL domain E2R47_02845 PF05170 AsmA family E2R47_02850 PF07690 Major Facilitator Superfamily E2R47_02850 PF00083 Sugar (and other) transporter E2R47_02855 PF03631 Virulence factor BrkB E2R47_02860 PF03466 LysR substrate binding domain E2R47_02860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2R47_02865 PF00196 Bacterial regulatory proteins, luxR family E2R47_02880 PF01204 Trehalase E2R47_02885 PF07702 UTRA domain E2R47_02885 PF00392 Bacterial regulatory proteins, gntR family E2R47_02890 PF01380 SIS domain E2R47_02895 PF00294 pfkB family carbohydrate kinase E2R47_02900 PF03605 Anaerobic c4-dicarboxylate membrane transporter E2R47_02905 PF17763 Glutaminase/Asparaginase C-terminal domain E2R47_02905 PF00710 Asparaginase, N-terminal E2R47_02910 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain E2R47_02910 PF07992 Pyridine nucleotide-disulphide oxidoreductase E2R47_02915 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ E2R47_02920 PF01569 PAP2 superfamily E2R47_02925 PF01432 Peptidase family M3 E2R47_02930 PF04445 Putative SAM-dependent methyltransferase E2R47_02935 PF00854 POT family E2R47_02940 PF00582 Universal stress protein family E2R47_02945 PF10625 Universal stress protein B (UspB) E2R47_02950 PF01384 Phosphate transporter family E2R47_02960 PF13533 Biotin-lipoyl like E2R47_02965 PF00005 ABC transporter E2R47_02975 PF01402 Ribbon-helix-helix protein, copG family E2R47_02975 PF08753 NikR C terminal nickel binding domain E2R47_02980 PF01648 4'-phosphopantetheinyl transferase superfamily E2R47_02985 PF01594 AI-2E family transporter E2R47_02990 PF07690 Major Facilitator Superfamily E2R47_02995 PF08786 DcrB E2R47_03000 PF02592 Putative vitamin uptake transporter E2R47_03005 PF01206 Sulfurtransferase TusA E2R47_03010 PF00672 HAMP domain E2R47_03010 PF02203 Tar ligand binding domain homologue E2R47_03010 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E2R47_03015 PF00403 Heavy-metal-associated domain E2R47_03020 PF07947 YhhN family E2R47_03025 PF10694 Protein of unknown function (DUF2500) E2R47_03030 PF06611 Protein of unknown function (DUF1145) E2R47_03040 PF00448 SRP54-type protein, GTPase domain E2R47_03040 PF02881 SRP54-type protein, helical bundle domain E2R47_03045 PF00005 ABC transporter E2R47_03050 PF02687 FtsX-like permease family E2R47_03050 PF18075 FtsX extracellular domain E2R47_03055 PF04542 Sigma-70 region 2 E2R47_03055 PF04545 Sigma-70, region 4 E2R47_03060 PF13458 Periplasmic binding protein E2R47_03070 PF12568 Acetyltransferase (GNAT) domain, PanZ E2R47_03075 PF13458 Periplasmic binding protein E2R47_03080 PF02653 Branched-chain amino acid transport system / permease component E2R47_03085 PF11862 Domain of unknown function (DUF3382) E2R47_03085 PF02653 Branched-chain amino acid transport system / permease component E2R47_03090 PF12399 Branched-chain amino acid ATP-binding cassette transporter E2R47_03090 PF00005 ABC transporter E2R47_03095 PF00005 ABC transporter E2R47_03100 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system E2R47_03110 PF13416 Bacterial extracellular solute-binding protein E2R47_03115 PF00528 Binding-protein-dependent transport system inner membrane component E2R47_03120 PF00528 Binding-protein-dependent transport system inner membrane component E2R47_03125 PF00005 ABC transporter E2R47_03125 PF17912 MalK OB fold domain E2R47_03130 PF03009 Glycerophosphoryl diester phosphodiesterase family E2R47_03135 PF10956 Protein of unknown function (DUF2756) E2R47_03145 PF02126 Phosphotriesterase family E2R47_03160 PF00294 pfkB family carbohydrate kinase E2R47_03165 PF00583 Acetyltransferase (GNAT) family E2R47_03170 PF02894 Oxidoreductase family, C-terminal alpha/beta domain E2R47_03170 PF01408 Oxidoreductase family, NAD-binding Rossmann fold E2R47_03175 PF02678 Pirin E2R47_03175 PF17954 Quercetinase C-terminal cupin domain E2R47_03180 PF00356 Bacterial regulatory proteins, lacI family E2R47_03180 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family E2R47_03185 PF01202 Shikimate kinase E2R47_03190 PF02447 GntP family permease E2R47_03195 PF01914 MarC family integral membrane protein E2R47_03200 PF02774 Semialdehyde dehydrogenase, dimerisation domain E2R47_03200 PF01118 Semialdehyde dehydrogenase, NAD binding domain E2R47_03205 PF00128 Alpha amylase, catalytic domain E2R47_03205 PF02806 Alpha amylase, C-terminal all-beta domain E2R47_03205 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) E2R47_03210 PF18390 Glycogen debranching enzyme C-terminal domain E2R47_03210 PF00128 Alpha amylase, catalytic domain E2R47_03210 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) E2R47_03215 PF00483 Nucleotidyl transferase E2R47_03220 PF08323 Starch synthase catalytic domain E2R47_03220 PF00534 Glycosyl transferases group 1 E2R47_03225 PF00343 Carbohydrate phosphorylase E2R47_03230 PF01614 Bacterial transcriptional regulator E2R47_03230 PF09339 IclR helix-turn-helix domain E2R47_03235 PF00701 Dihydrodipicolinate synthetase family E2R47_03240 PF00920 Dehydratase family E2R47_03245 PF07690 Major Facilitator Superfamily E2R47_03250 PF00465 Iron-containing alcohol dehydrogenase E2R47_03265 PF01266 FAD dependent oxidoreductase E2R47_03265 PF16901 C-terminal domain of alpha-glycerophosphate oxidase E2R47_03270 PF00581 Rhodanese-like domain E2R47_03275 PF01694 Rhomboid family E2R47_03275 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease E2R47_03280 PF00455 DeoR C terminal sensor domain E2R47_03280 PF08220 DeoR-like helix-turn-helix domain E2R47_03285 PF06956 Regulator of RNA terminal phosphate cyclase E2R47_03285 PF00158 Sigma-54 interaction domain E2R47_03295 PF01139 tRNA-splicing ligase RtcB E2R47_03300 PF05189 RNA 3'-terminal phosphate cyclase (RTC), insert domain E2R47_03300 PF01137 RNA 3'-terminal phosphate cyclase E2R47_03310 PF00196 Bacterial regulatory proteins, luxR family E2R47_03310 PF17874 MalT-like TPR region E2R47_03315 PF00343 Carbohydrate phosphorylase E2R47_03320 PF02446 4-alpha-glucanotransferase E2R47_03325 PF02447 GntP family permease E2R47_03330 PF01106 NifU-like domain E2R47_03330 PF01521 Iron-sulphur cluster biosynthesis E2R47_03335 PF00156 Phosphoribosyl transferase domain E2R47_03340 PF00561 alpha/beta hydrolase fold E2R47_03345 PF04754 Putative transposase, YhgA-like E2R47_03350 PF09012 FeoC like transcriptional regulator E2R47_03355 PF17910 FeoB cytosolic helical domain E2R47_03355 PF07664 Ferrous iron transport protein B C terminus E2R47_03355 PF07670 Nucleoside recognition E2R47_03355 PF02421 Ferrous iron transport protein B E2R47_03360 PF04023 FeoA domain E2R47_03365 PF17674 HHH domain E2R47_03365 PF09371 Tex-like protein N-terminal domain E2R47_03365 PF16921 Tex protein YqgF-like domain E2R47_03365 PF00575 S1 RNA binding domain E2R47_03370 PF03449 Transcription elongation factor, N-terminal E2R47_03370 PF01272 Transcription elongation factor, GreA/GreB, C-term E2R47_03375 PF00486 Transcriptional regulatory protein, C terminal E2R47_03375 PF00072 Response regulator receiver domain E2R47_03380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E2R47_03380 PF00672 HAMP domain E2R47_03380 PF00512 His Kinase A (phospho-acceptor) domain E2R47_03385 PF01293 Phosphoenolpyruvate carboxykinase E2R47_03390 PF13687 Domain of unknown function (DUF4153) E2R47_03395 PF01430 Hsp33 protein E2R47_03400 PF01479 S4 domain E2R47_03405 PF13419 Haloacid dehalogenase-like hydrolase E2R47_03410 PF07095 Intracellular growth attenuator protein IgaA E2R47_03415 PF00293 NUDIX domain E2R47_03420 PF17092 Penicillin-binding protein OB-like domain E2R47_03420 PF00912 Transglycosylase E2R47_03420 PF00905 Penicillin binding protein transpeptidase domain E2R47_03430 PF05137 Fimbrial assembly protein (PilN) E2R47_03440 PF10748 DNA utilization proteins HofP E2R47_03445 PF03958 Bacterial type II/III secretion system short domain E2R47_03445 PF00263 Bacterial type II and III secretion system protein E2R47_03455 PF01202 Shikimate kinase E2R47_03460 PF01761 3-dehydroquinate synthase E2R47_03465 PF05036 Sporulation related domain E2R47_03470 PF02086 D12 class N6 adenine-specific DNA methyltransferase E2R47_03475 PF00834 Ribulose-phosphate 3 epimerase family E2R47_03480 PF13419 Haloacid dehalogenase-like hydrolase E2R47_03485 PF00579 tRNA synthetases class I (W and Y) E2R47_03490 PF13978 Protein of unknown function (DUF4223) E2R47_03500 PF14824 Sirohaem biosynthesis protein central E2R47_03500 PF10414 Sirohaem synthase dimerisation region E2R47_03500 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases E2R47_03505 PF01226 Formate/nitrite transporter E2R47_03510 PF13806 Rieske-like [2Fe-2S] domain E2R47_03515 PF04324 BFD-like [2Fe-2S] binding domain E2R47_03515 PF07992 Pyridine nucleotide-disulphide oxidoreductase E2R47_03515 PF18267 Rubredoxin NAD+ reductase C-terminal domain E2R47_03515 PF01077 Nitrite and sulphite reductase 4Fe-4S domain E2R47_03515 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain E2R47_03520 PF07690 Major Facilitator Superfamily E2R47_03525 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD E2R47_03530 PF10832 Protein of unknown function (DUF2559) E2R47_03535 PF02661 Fic/DOC family E2R47_03540 PF00117 Glutamine amidotransferase class-I E2R47_03545 PF00202 Aminotransferase class-III E2R47_03550 PF12805 FUSC-like inner membrane protein yccS E2R47_03555 PF00027 Cyclic nucleotide-binding domain E2R47_03555 PF13545 Crp-like helix-turn-helix domain E2R47_03560 PF02566 OsmC-like protein E2R47_03565 PF00485 Phosphoribulokinase / Uridine kinase family E2R47_03570 PF06794 Uncharacterised protein family (UPF0270) E2R47_03575 PF00561 alpha/beta hydrolase fold E2R47_03580 PF08803 Putative mono-oxygenase ydhR E2R47_03585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2R47_03585 PF03466 LysR substrate binding domain E2R47_03590 PF12848 ABC transporter E2R47_03590 PF00005 ABC transporter E2R47_03595 PF02525 Flavodoxin-like fold E2R47_03600 PF02254 TrkA-N domain E2R47_03600 PF00999 Sodium/hydrogen exchanger family E2R47_03605 PF09526 Probable metal-binding protein (DUF2387) E2R47_03610 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase E2R47_03615 PF04102 SlyX E2R47_03620 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase E2R47_03620 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase E2R47_03625 PF08348 YheO-like PAS domain E2R47_03625 PF13309 HTH domain E2R47_03630 PF02635 DsrE/DsrF-like family E2R47_03635 PF02635 DsrE/DsrF-like family E2R47_03640 PF04077 DsrH like protein E2R47_03645 PF00164 Ribosomal protein S12/S23 E2R47_03650 PF00177 Ribosomal protein S7p/S5e E2R47_03655 PF00009 Elongation factor Tu GTP binding domain E2R47_03655 PF03144 Elongation factor Tu domain 2 E2R47_03655 PF14492 Elongation Factor G, domain II E2R47_03655 PF00679 Elongation factor G C-terminus E2R47_03655 PF03764 Elongation factor G, domain IV E2R47_03660 PF00009 Elongation factor Tu GTP binding domain E2R47_03660 PF03143 Elongation factor Tu C-terminal domain E2R47_03660 PF03144 Elongation factor Tu domain 2 E2R47_03665 PF04324 BFD-like [2Fe-2S] binding domain E2R47_03670 PF00210 Ferritin-like domain E2R47_03675 PF01478 Type IV leader peptidase family E2R47_03680 PF00338 Ribosomal protein S10p/S20e E2R47_03685 PF00297 Ribosomal protein L3 E2R47_03690 PF00573 Ribosomal protein L4/L1 family E2R47_03695 PF00276 Ribosomal protein L23 E2R47_03700 PF00181 Ribosomal Proteins L2, RNA binding domain E2R47_03700 PF03947 Ribosomal Proteins L2, C-terminal domain E2R47_03705 PF00203 Ribosomal protein S19 E2R47_03710 PF00237 Ribosomal protein L22p/L17e E2R47_03715 PF00189 Ribosomal protein S3, C-terminal domain E2R47_03715 PF07650 KH domain E2R47_03720 PF00252 Ribosomal protein L16p/L10e E2R47_03725 PF00831 Ribosomal L29 protein E2R47_03730 PF00366 Ribosomal protein S17 E2R47_03735 PF00238 Ribosomal protein L14p/L23e E2R47_03740 PF00467 KOW motif E2R47_03740 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 E2R47_03745 PF00673 ribosomal L5P family C-terminus E2R47_03745 PF00281 Ribosomal protein L5 E2R47_03750 PF00253 Ribosomal protein S14p/S29e E2R47_03755 PF00410 Ribosomal protein S8 E2R47_03760 PF00347 Ribosomal protein L6 E2R47_03765 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast E2R47_03770 PF00333 Ribosomal protein S5, N-terminal domain E2R47_03770 PF03719 Ribosomal protein S5, C-terminal domain E2R47_03775 PF00327 Ribosomal protein L30p/L7e E2R47_03780 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A E2R47_03785 PF00344 SecY translocase E2R47_03790 PF00444 Ribosomal protein L36 E2R47_03795 PF00416 Ribosomal protein S13/S18 E2R47_03800 PF00411 Ribosomal protein S11 E2R47_03805 PF01479 S4 domain E2R47_03805 PF00163 Ribosomal protein S4/S9 N-terminal domain E2R47_03810 PF01000 RNA polymerase Rpb3/RpoA insert domain E2R47_03810 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain E2R47_03810 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain E2R47_03815 PF01196 Ribosomal protein L17 E2R47_03820 PF09350 Domain of unknown function (DUF1992) E2R47_03825 PF13411 MerR HTH family regulatory protein E2R47_03830 PF03889 Alternative ribosome-rescue factor A E2R47_03835 PF01741 Large-conductance mechanosensitive channel, MscL E2R47_03840 PF02080 TrkA-C domain E2R47_03840 PF02254 TrkA-N domain E2R47_03845 PF01189 16S rRNA methyltransferase RsmB/F E2R47_03845 PF01029 NusB family E2R47_03850 PF00551 Formyl transferase E2R47_03850 PF02911 Formyl transferase, C-terminal domain E2R47_03855 PF01327 Polypeptide deformylase E2R47_03860 PF17782 DprA winged helix domain E2R47_03860 PF02481 DNA recombination-mediator protein A E2R47_03865 PF04361 Protein of unknown function (DUF494) E2R47_03870 PF01396 Topoisomerase DNA binding C4 zinc finger E2R47_03875 PF01300 Telomere recombination E2R47_03880 PF08501 Shikimate dehydrogenase substrate binding domain E2R47_03880 PF18317 Shikimate 5'-dehydrogenase C-terminal domain E2R47_03880 PF01488 Shikimate / quinate 5-dehydrogenase E2R47_03885 PF07369 Protein of unknown function (DUF1488) E2R47_03890 PF00132 Bacterial transferase hexapeptide (six repeats) E2R47_03930 PF00873 AcrB/AcrD/AcrF family E2R47_03935 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion E2R47_03935 PF00529 HlyD membrane-fusion protein of T1SS E2R47_03940 PF08361 MAATS-type transcriptional repressor, C-terminal region E2R47_03940 PF00440 Bacterial regulatory proteins, tetR family E2R47_03950 PF10831 Protein of unknown function (DUF2556) E2R47_03955 PF01555 DNA methylase E2R47_03960 PF02954 Bacterial regulatory protein, Fis family E2R47_03965 PF01207 Dihydrouridine synthase (Dus) E2R47_03975 PF00474 Sodium:solute symporter family E2R47_03980 PF06196 Protein of unknown function (DUF997) E2R47_03985 PF00289 Biotin carboxylase, N-terminal domain E2R47_03985 PF02785 Biotin carboxylase C-terminal domain E2R47_03985 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain E2R47_03990 PF00364 Biotin-requiring enzyme E2R47_03995 PF01794 Ferric reductase like transmembrane component E2R47_04000 PF00174 Oxidoreductase molybdopterin binding domain E2R47_04005 PF00107 Zinc-binding dehydrogenase E2R47_04005 PF08240 Alcohol dehydrogenase GroES-like domain E2R47_04010 PF00563 EAL domain E2R47_04010 PF00990 Diguanylate cyclase, GGDEF domain E2R47_04010 PF17157 Gammaproteobacterial periplasmic sensor domain E2R47_04025 PF04085 rod shape-determining protein MreC E2R47_04030 PF04093 rod shape-determining protein MreD E2R47_04035 PF02545 Maf-like protein E2R47_04040 PF10150 Ribonuclease E/G family E2R47_04040 PF00575 S1 RNA binding domain E2R47_04045 PF13502 AsmA-like C-terminal region E2R47_04045 PF13116 Protein of unknown function E2R47_04050 PF01523 Putative modulator of DNA gyrase E2R47_04055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2R47_04055 PF03466 LysR substrate binding domain E2R47_04060 PF07869 Protein of unknown function (DUF1656) E2R47_04065 PF13533 Biotin-lipoyl like E2R47_04070 PF04632 Fusaric acid resistance protein family E2R47_04075 PF01337 Barstar (barnase inhibitor) E2R47_04080 PF07338 Protein of unknown function (DUF1471) E2R47_04085 PF07338 Protein of unknown function (DUF1471) E2R47_04090 PF02863 Arginine repressor, C-terminal domain E2R47_04090 PF01316 Arginine repressor, DNA binding domain E2R47_04095 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain E2R47_04095 PF00056 lactate/malate dehydrogenase, NAD binding domain E2R47_04110 PF00939 Sodium:sulfate symporter transmembrane region E2R47_04115 PF05681 Fumarate hydratase (Fumerase) E2R47_04120 PF05683 Fumarase C-terminus E2R47_04125 PF04277 Oxaloacetate decarboxylase, gamma chain E2R47_04130 PF00682 HMGL-like E2R47_04130 PF02436 Conserved carboxylase domain E2R47_04130 PF00364 Biotin-requiring enzyme E2R47_04135 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit E2R47_04140 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase E2R47_04145 PF13180 PDZ domain E2R47_04150 PF13180 PDZ domain E2R47_04150 PF00595 PDZ domain E2R47_04155 PF06295 Protein of unknown function (DUF1043) E2R47_04160 PF03969 AFG1-like ATPase E2R47_04165 PF00572 Ribosomal protein L13 E2R47_04170 PF00380 Ribosomal protein S9/S16 E2R47_04175 PF02798 Glutathione S-transferase, N-terminal domain E2R47_04175 PF00043 Glutathione S-transferase, C-terminal domain E2R47_04180 PF04386 Stringent starvation protein B E2R47_04185 PF07729 FCD domain E2R47_04185 PF00392 Bacterial regulatory proteins, gntR family E2R47_04190 PF00701 Dihydrodipicolinate synthetase family E2R47_04195 PF07690 Major Facilitator Superfamily E2R47_04200 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase E2R47_04205 PF00480 ROK family E2R47_04210 PF04074 YhcH/YjgK/YiaL E2R47_04215 PF07969 Amidohydrolase family E2R47_04220 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin E2R47_04225 PF17761 DUF1016 N-terminal domain E2R47_04225 PF06250 YhcG PDDEXK nuclease domain E2R47_04230 PF07992 Pyridine nucleotide-disulphide oxidoreductase E2R47_04230 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster E2R47_04235 PF04898 Glutamate synthase central domain E2R47_04235 PF00310 Glutamine amidotransferases class-II E2R47_04235 PF01493 GXGXG motif E2R47_04235 PF01645 Conserved region in glutamate synthase E2R47_04240 PF04055 Radical SAM superfamily E2R47_04240 PF16199 Radical_SAM C-terminal domain E2R47_04245 PF00512 His Kinase A (phospho-acceptor) domain E2R47_04245 PF00072 Response regulator receiver domain E2R47_04245 PF00989 PAS fold E2R47_04245 PF01627 Hpt domain E2R47_04245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E2R47_04245 PF18415 Histidine kinase receptor ArcB trans-membrane domain E2R47_04255 PF00912 Transglycosylase E2R47_04260 PF10707 PhoP regulatory network protein YrbL E2R47_04270 PF00381 PTS HPr component phosphorylation site E2R47_04275 PF03668 P-loop ATPase protein family E2R47_04280 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 E2R47_04285 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein E2R47_04290 PF04552 Sigma-54, DNA binding domain E2R47_04290 PF04963 Sigma-54 factor, core binding domain E2R47_04290 PF00309 Sigma-54 factor, Activator interacting domain (AID) E2R47_04295 PF12399 Branched-chain amino acid ATP-binding cassette transporter E2R47_04295 PF00005 ABC transporter E2R47_04300 PF03968 OstA-like protein E2R47_04305 PF06835 Lipopolysaccharide-assembly, LptC-related E2R47_04315 PF01380 SIS domain E2R47_04315 PF00571 CBS domain E2R47_04320 PF01699 Sodium/calcium exchanger protein E2R47_04325 PF00005 ABC transporter E2R47_04330 PF02405 Permease MlaE E2R47_04335 PF02470 MlaD protein E2R47_04340 PF05494 MlaC protein E2R47_04345 PF13466 STAS domain E2R47_04350 PF01722 BolA-like protein E2R47_04355 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) E2R47_04360 PF13693 Winged helix-turn-helix DNA-binding E2R47_04365 PF00348 Polyprenyl synthetase E2R47_04370 PF00829 Ribosomal prokaryotic L21 protein E2R47_04375 PF01016 Ribosomal L27 protein E2R47_04380 PF00892 EamA-like transporter family E2R47_04385 PF01926 50S ribosome-binding GTPase E2R47_04385 PF01018 GTP1/OBG E2R47_04390 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family E2R47_04395 PF03449 Transcription elongation factor, N-terminal E2R47_04395 PF01272 Transcription elongation factor, GreA/GreB, C-term E2R47_04400 PF01985 CRS1 / YhbY (CRM) domain E2R47_04405 PF01728 FtsJ-like methyltransferase E2R47_04410 PF01434 Peptidase family M41 E2R47_04410 PF00004 ATPase family associated with various cellular activities (AAA) E2R47_04410 PF06480 FtsH Extracellular E2R47_04410 PF17862 AAA+ lid domain E2R47_04415 PF00809 Pterin binding enzyme E2R47_04420 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I E2R47_04420 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III E2R47_04420 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II E2R47_04420 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain E2R47_04425 PF03840 Preprotein translocase SecG subunit E2R47_04440 PF00764 Arginosuccinate synthase E2R47_04450 PF17384 RimP C-terminal SH3 domain E2R47_04450 PF02576 RimP N-terminal domain E2R47_04455 PF08529 NusA N-terminal domain E2R47_04455 PF13184 NusA-like KH domain E2R47_04460 PF00009 Elongation factor Tu GTP binding domain E2R47_04460 PF11987 Translation-initiation factor 2 E2R47_04460 PF04760 Translation initiation factor IF-2, N-terminal region E2R47_04460 PF08364 Bacterial translation initiation factor IF-2 associated region E2R47_04465 PF02033 Ribosome-binding factor A E2R47_04470 PF01509 TruB family pseudouridylate synthase (N terminal domain) E2R47_04470 PF16198 tRNA pseudouridylate synthase B C-terminal domain E2R47_04470 PF09157 Pseudouridine synthase II TruB, C-terminal E2R47_04475 PF00312 Ribosomal protein S15 E2R47_04480 PF03725 3' exoribonuclease family, domain 2 E2R47_04480 PF00575 S1 RNA binding domain E2R47_04480 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain E2R47_04480 PF00013 KH domain E2R47_04480 PF01138 3' exoribonuclease family, domain 1 E2R47_04485 PF13181 Tetratricopeptide repeat E2R47_04485 PF07719 Tetratricopeptide repeat E2R47_04495 PF00270 DEAD/DEAH box helicase E2R47_04495 PF03880 DbpA RNA binding domain E2R47_04495 PF12343 Cold shock protein DEAD box A E2R47_04495 PF00271 Helicase conserved C-terminal domain E2R47_04500 PF03222 Tryptophan/tyrosine permease family E2R47_04505 PF00296 Luciferase-like monooxygenase E2R47_04525 PF13508 Acetyltransferase (GNAT) domain E2R47_04530 PF01541 GIY-YIG catalytic domain E2R47_04540 PF01965 DJ-1/PfpI family E2R47_04545 PF13460 NAD(P)H-binding E2R47_04550 PF04972 BON domain E2R47_04555 PF13580 SIS domain E2R47_04560 PF02021 Uncharacterised protein family UPF0102 E2R47_04565 PF04348 LppC putative lipoprotein E2R47_04570 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases E2R47_04575 PF08220 DeoR-like helix-turn-helix domain E2R47_04580 PF00107 Zinc-binding dehydrogenase E2R47_04580 PF08240 Alcohol dehydrogenase GroES-like domain E2R47_04585 PF03611 PTS system sugar-specific permease component E2R47_04590 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit E2R47_04595 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 E2R47_04600 PF08013 Tagatose 6 phosphate kinase E2R47_04605 PF01116 Fructose-bisphosphate aldolase class-II E2R47_04610 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus E2R47_04610 PF08666 SAF domain E2R47_04615 PF03328 HpcH/HpaI aldolase/citrate lyase family E2R47_04620 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase E2R47_04620 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase E2R47_04625 PF02595 Glycerate kinase family E2R47_04645 PF00239 Resolvase, N terminal domain E2R47_04645 PF02796 Helix-turn-helix domain of resolvase E2R47_04670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2R47_04670 PF03466 LysR substrate binding domain E2R47_04675 PF00291 Pyridoxal-phosphate dependent enzyme E2R47_04680 PF03222 Tryptophan/tyrosine permease family E2R47_04685 PF00871 Acetokinase family E2R47_04690 PF01228 Glycine radical E2R47_04690 PF02901 Pyruvate formate lyase-like E2R47_04695 PF03313 Serine dehydratase alpha chain E2R47_04695 PF03315 Serine dehydratase beta chain E2R47_04705 PF03313 Serine dehydratase alpha chain E2R47_04715 PF17954 Quercetinase C-terminal cupin domain E2R47_04715 PF02678 Pirin E2R47_04720 PF03466 LysR substrate binding domain E2R47_04720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2R47_04725 PF05656 Protein of unknown function (DUF805) E2R47_04730 PF13409 Glutathione S-transferase, N-terminal domain E2R47_04735 PF07681 DoxX E2R47_04740 PF13997 YqjK-like protein E2R47_04745 PF07332 Putative Actinobacterial Holin-X, holin superfamily III E2R47_04750 PF05957 Bacterial protein of unknown function (DUF883) E2R47_04755 PF06476 Protein of unknown function (DUF1090) E2R47_04760 PF13721 SecD export protein N-terminal TM region E2R47_04765 PF09335 SNARE associated Golgi protein E2R47_04770 PF00375 Sodium:dicarboxylate symporter family E2R47_04775 PF03741 Integral membrane protein TerC family E2R47_04780 PF01408 Oxidoreductase family, NAD-binding Rossmann fold E2R47_04785 PF02698 DUF218 domain E2R47_04790 PF01863 Protein of unknown function DUF45 E2R47_04795 PF05175 Methyltransferase small domain E2R47_04800 PF07992 Pyridine nucleotide-disulphide oxidoreductase E2R47_04800 PF00724 NADH:flavin oxidoreductase / NADH oxidase family E2R47_04805 PF00202 Aminotransferase class-III E2R47_04810 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E2R47_04810 PF08447 PAS fold E2R47_04815 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E2R47_04815 PF00672 HAMP domain E2R47_04815 PF02203 Tar ligand binding domain homologue E2R47_04820 PF03551 Transcriptional regulator PadR-like family E2R47_04825 PF04954 Siderophore-interacting protein E2R47_04825 PF08021 Siderophore-interacting FAD-binding domain E2R47_04835 PF03167 Uracil DNA glycosylase superfamily E2R47_04840 PF04539 Sigma-70 region 3 E2R47_04840 PF04545 Sigma-70, region 4 E2R47_04840 PF04542 Sigma-70 region 2 E2R47_04840 PF00140 Sigma-70 factor, region 1.2 E2R47_04840 PF03979 Sigma-70 factor, region 1.1 E2R47_04840 PF04546 Sigma-70, non-essential region E2R47_04845 PF01807 CHC2 zinc finger E2R47_04845 PF08278 DNA primase DnaG DnaB-binding E2R47_04845 PF10410 DnaB-helicase binding domain of primase E2R47_04845 PF08275 DNA primase catalytic core, N-terminal domain E2R47_04850 PF01165 Ribosomal protein S21 E2R47_04855 PF00814 Glycoprotease family E2R47_04865 PF02660 Glycerol-3-phosphate acyltransferase E2R47_04870 PF02152 Dihydroneopterin aldolase E2R47_04875 PF02673 Bacitracin resistance protein BacA E2R47_04880 PF12627 Probable RNA and SrmB- binding site of polymerase A E2R47_04880 PF01966 HD domain E2R47_04880 PF01743 Poly A polymerase head domain E2R47_04885 PF08239 Bacterial SH3 domain E2R47_04890 PF01928 CYTH domain E2R47_04895 PF08335 GlnD PII-uridylyltransferase E2R47_04895 PF03710 Glutamate-ammonia ligase adenylyltransferase E2R47_04900 PF01467 Cytidylyltransferase-like E2R47_04900 PF00294 pfkB family carbohydrate kinase E2R47_04910 PF15975 Flotillin E2R47_04910 PF01145 SPFH domain / Band 7 family E2R47_04915 PF07290 Protein of unknown function (DUF1449) E2R47_04920 PF08971 Glycogen synthesis protein E2R47_04925 PF04380 Membrane fusogenic activity E2R47_04930 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase E2R47_04935 PF02600 Disulfide bond formation protein DsbB E2R47_04940 PF01323 DSBA-like thioredoxin domain E2R47_04945 PF05935 Arylsulfotransferase (ASST) E2R47_04945 PF17425 Arylsulfotransferase Ig-like domain E2R47_04950 PF02535 ZIP Zinc transporter E2R47_04955 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase E2R47_04960 PF03738 Glutathionylspermidine synthase preATP-grasp E2R47_04965 PF06693 Protein of unknown function (DUF1190) E2R47_04970 PF02321 Outer membrane efflux protein E2R47_04975 PF00293 NUDIX domain E2R47_04980 PF06853 Protein of unknown function (DUF1249) E2R47_04985 PF00149 Calcineurin-like phosphoesterase E2R47_04990 PF05728 Uncharacterised protein family (UPF0227) E2R47_04995 PF01751 Toprim domain E2R47_04995 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E2R47_04995 PF00986 DNA gyrase B subunit, carboxyl terminus E2R47_04995 PF00204 DNA gyrase B E2R47_05000 PF03992 Antibiotic biosynthesis monooxygenase E2R47_05005 PF02525 Flavodoxin-like fold E2R47_05010 PF08521 Two-component sensor kinase N-terminal E2R47_05010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E2R47_05010 PF00512 His Kinase A (phospho-acceptor) domain E2R47_05015 PF00486 Transcriptional regulatory protein, C terminal E2R47_05015 PF00072 Response regulator receiver domain E2R47_05020 PF04076 Bacterial OB fold (BOF) protein E2R47_05025 PF06445 GyrI-like small molecule binding domain E2R47_05030 PF00521 DNA gyrase/topoisomerase IV, subunit A E2R47_05030 PF03989 DNA gyrase C-terminal domain, beta-propeller E2R47_05035 PF01553 Acyltransferase E2R47_05040 PF07732 Multicopper oxidase E2R47_05040 PF07731 Multicopper oxidase E2R47_05040 PF00394 Multicopper oxidase E2R47_05045 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component E2R47_05055 PF03480 Bacterial extracellular solute-binding protein, family 7 E2R47_05060 PF04055 Radical SAM superfamily E2R47_05060 PF11842 Domain of unknown function (DUF3362) E2R47_05060 PF08497 Radical SAM N-terminal E2R47_05080 PF00939 Sodium:sulfate symporter transmembrane region E2R47_05085 PF00248 Aldo/keto reductase family E2R47_05090 PF00465 Iron-containing alcohol dehydrogenase E2R47_05095 PF06719 AraC-type transcriptional regulator N-terminus E2R47_05095 PF12833 Helix-turn-helix domain E2R47_05100 PF09335 SNARE associated Golgi protein E2R47_05105 PF01053 Cys/Met metabolism PLP-dependent enzyme E2R47_05110 PF01618 MotA/TolQ/ExbB proton channel family E2R47_05115 PF02472 Biopolymer transport protein ExbD/TolR E2R47_05140 PF03350 Uncharacterized protein family, UPF0114 E2R47_05145 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E2R47_05145 PF02203 Tar ligand binding domain homologue E2R47_05145 PF00672 HAMP domain E2R47_05150 PF11115 Protein of unknown function (DUF2623) E2R47_05155 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit E2R47_05155 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal E2R47_05160 PF13247 4Fe-4S dicluster domain E2R47_05165 PF03916 Polysulphide reductase, NrfD E2R47_05170 PF00374 Nickel-dependent hydrogenase E2R47_05175 PF01750 Hydrogenase maturation protease E2R47_05180 PF11939 [NiFe]-hydrogenase assembly, chaperone, HybE E2R47_05185 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA E2R47_05190 PF01455 HupF/HypC family E2R47_05205 PF02798 Glutathione S-transferase, N-terminal domain E2R47_05210 PF03738 Glutathionylspermidine synthase preATP-grasp E2R47_05210 PF05257 CHAP domain E2R47_05225 PF02614 Glucuronate isomerase E2R47_05230 PF08125 Mannitol dehydrogenase C-terminal domain E2R47_05230 PF01232 Mannitol dehydrogenase Rossmann domain E2R47_05235 PF03786 D-mannonate dehydratase (UxuA) E2R47_05240 PF07690 Major Facilitator Superfamily E2R47_05250 PF01522 Polysaccharide deacetylase E2R47_05260 PF04965 Gene 25-like lysozyme E2R47_05265 PF00171 Aldehyde dehydrogenase family E2R47_05270 PF01266 FAD dependent oxidoreductase E2R47_05280 PF13520 Amino acid permease E2R47_05290 PF00196 Bacterial regulatory proteins, luxR family E2R47_05295 PF04055 Radical SAM superfamily E2R47_05300 PF00884 Sulfatase E2R47_05305 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2R47_05305 PF03466 LysR substrate binding domain E2R47_05310 PF03328 HpcH/HpaI aldolase/citrate lyase family E2R47_05315 PF01575 MaoC like domain E2R47_05320 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain E2R47_05320 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain E2R47_05325 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily E2R47_05350 PF00111 2Fe-2S iron-sulfur cluster binding domain E2R47_05350 PF00970 Oxidoreductase FAD-binding domain E2R47_05350 PF00175 Oxidoreductase NAD-binding domain E2R47_05355 PF07338 Protein of unknown function (DUF1471) E2R47_05360 PF02525 Flavodoxin-like fold E2R47_05365 PF03466 LysR substrate binding domain E2R47_05375 PF04474 Protein of unknown function (DUF554) E2R47_05380 PF01276 Orn/Lys/Arg decarboxylase, major domain E2R47_05380 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain E2R47_05380 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain E2R47_05385 PF03825 Nucleoside H+ symporter E2R47_05390 PF01464 Transglycosylase SLT domain E2R47_05390 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain E2R47_05395 PF04362 Bacterial Fe(2+) trafficking E2R47_05400 PF00633 Helix-hairpin-helix motif E2R47_05400 PF00730 HhH-GPD superfamily base excision DNA repair protein E2R47_05400 PF14815 NUDIX domain E2R47_05405 PF02390 Putative methyltransferase E2R47_05410 PF04320 Protein with unknown function (DUF469) E2R47_05415 PF11101 Protein of unknown function (DUF2884) E2R47_05420 PF00710 Asparaginase, N-terminal E2R47_05420 PF17763 Glutaminase/Asparaginase C-terminal domain E2R47_05425 PF06717 Protein of unknown function (DUF1202) E2R47_05430 PF04055 Radical SAM superfamily E2R47_05430 PF06969 HemN C-terminal domain E2R47_05435 PF01725 Ham1 family E2R47_05440 PF02594 Uncharacterised ACR, YggU family COG1872 E2R47_05445 PF02325 YGGT family E2R47_05450 PF01168 Alanine racemase, N-terminal domain E2R47_05455 PF00437 Type II/IV secretion system protein E2R47_05465 PF03652 Holliday junction resolvase E2R47_05470 PF02622 Uncharacterized ACR, COG1678 E2R47_05475 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain E2R47_05475 PF02951 Prokaryotic glutathione synthetase, N-terminal domain E2R47_05480 PF04452 RNA methyltransferase E2R47_05485 PF04231 Endonuclease I E2R47_05490 PF17283 SprT-like zinc ribbon domain E2R47_05490 PF10263 SprT-like family E2R47_05495 PF00083 Sugar (and other) transporter E2R47_05500 PF02772 S-adenosylmethionine synthetase, central domain E2R47_05500 PF00438 S-adenosylmethionine synthetase, N-terminal domain E2R47_05500 PF02773 S-adenosylmethionine synthetase, C-terminal domain E2R47_05510 PF17430 Uncharacterized YqgC-like E2R47_05520 PF17944 Arginine decarboxylase C-terminal helical extension E2R47_05520 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain E2R47_05520 PF17810 Arginine decarboxylase helical bundle domain E2R47_05530 PF07729 FCD domain E2R47_05530 PF00392 Bacterial regulatory proteins, gntR family E2R47_05540 PF08125 Mannitol dehydrogenase C-terminal domain E2R47_05540 PF01232 Mannitol dehydrogenase Rossmann domain E2R47_05545 PF00107 Zinc-binding dehydrogenase E2R47_05545 PF08240 Alcohol dehydrogenase GroES-like domain E2R47_05550 PF02615 Malate/L-lactate dehydrogenase E2R47_05555 PF04074 YhcH/YjgK/YiaL E2R47_05560 PF00561 alpha/beta hydrolase fold E2R47_05565 PF00491 Arginase family E2R47_05570 PF01435 Peptidase family M48 E2R47_05575 PF02779 Transketolase, pyrimidine binding domain E2R47_05575 PF02780 Transketolase, C-terminal domain E2R47_05575 PF00456 Transketolase, thiamine diphosphate binding domain E2R47_05580 PF00005 ABC transporter E2R47_05585 PF00005 ABC transporter E2R47_05610 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain E2R47_05610 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain E2R47_05615 PF00162 Phosphoglycerate kinase E2R47_05620 PF01116 Fructose-bisphosphate aldolase class-II E2R47_05630 PF01797 Transposase IS200 like E2R47_05640 PF00924 Mechanosensitive ion channel E2R47_05640 PF05552 Conserved TM helix E2R47_05645 PF01810 LysE type translocator E2R47_05650 PF04402 Protein of unknown function (DUF541) E2R47_05660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2R47_05660 PF03466 LysR substrate binding domain E2R47_05665 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) E2R47_05670 PF01842 ACT domain E2R47_05670 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain E2R47_05670 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain E2R47_05675 PF01812 5-formyltetrahydrofolate cyclo-ligase family E2R47_05685 PF05164 Cell division protein ZapA E2R47_05690 PF03695 Uncharacterised protein family (UPF0149) E2R47_05695 PF00557 Metallopeptidase family M24 E2R47_05695 PF05195 Aminopeptidase P, N-terminal domain E2R47_05700 PF01494 FAD binding domain E2R47_05705 PF01494 FAD binding domain E2R47_05710 PF08669 Glycine cleavage T-protein C-terminal barrel domain E2R47_05710 PF01571 Aminomethyltransferase folate-binding domain E2R47_05715 PF01597 Glycine cleavage H-protein E2R47_05720 PF02347 Glycine cleavage system P-protein E2R47_05735 PF00232 Glycosyl hydrolase family 1 E2R47_05745 PF03006 Haemolysin-III related E2R47_05755 PF01571 Aminomethyltransferase folate-binding domain E2R47_05760 PF03937 Flavinator of succinate dehydrogenase E2R47_05765 PF07254 Membrane-bound toxin component of toxin-antitoxin system E2R47_05770 PF00258 Flavodoxin E2R47_05775 PF02899 Phage integrase, N-terminal SAM-like domain E2R47_05775 PF00589 Phage integrase family E2R47_05780 PF10411 Disulfide bond isomerase protein N-terminus E2R47_05780 PF13098 Thioredoxin-like domain E2R47_05785 PF17768 RecJ OB domain E2R47_05785 PF02272 DHHA1 domain E2R47_05785 PF01368 DHH family E2R47_05795 PF00152 tRNA synthetases class II (D, K and N) E2R47_05795 PF01336 OB-fold nucleic acid binding domain E2R47_05800 PF00293 NUDIX domain E2R47_05810 PF01551 Peptidase family M23 E2R47_05810 PF01476 LysM domain E2R47_05835 PF13505 Outer membrane protein beta-barrel domain E2R47_05845 PF00419 Fimbrial protein E2R47_05850 PF13953 PapC C-terminal domain E2R47_05850 PF13954 PapC N-terminal domain E2R47_05850 PF00577 Outer membrane usher protein E2R47_05855 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain E2R47_05855 PF02753 Pili assembly chaperone PapD, C-terminal domain E2R47_05875 PF03824 High-affinity nickel-transport protein E2R47_05880 PF02583 Metal-sensitive transcriptional repressor E2R47_05885 PF03222 Tryptophan/tyrosine permease family E2R47_05895 PF03466 LysR substrate binding domain E2R47_05895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2R47_05900 PF02803 Thiolase, C-terminal domain E2R47_05900 PF00108 Thiolase, N-terminal domain E2R47_05910 PF04962 KduI/IolB family E2R47_05920 PF00083 Sugar (and other) transporter E2R47_05925 PF01177 Asp/Glu/Hydantoin racemase E2R47_05930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2R47_05930 PF03466 LysR substrate binding domain E2R47_05935 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain E2R47_05935 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain E2R47_05940 PF00356 Bacterial regulatory proteins, lacI family E2R47_05945 PF00356 Bacterial regulatory proteins, lacI family E2R47_05960 PF00501 AMP-binding enzyme E2R47_05960 PF01553 Acyltransferase E2R47_05965 PF07690 Major Facilitator Superfamily E2R47_05970 PF00248 Aldo/keto reductase family E2R47_05975 PF06004 Bacterial protein of unknown function (DUF903) E2R47_05980 PF03741 Integral membrane protein TerC family E2R47_05985 PF02976 DNA mismatch repair enzyme MutH E2R47_05990 PF00293 NUDIX domain E2R47_05995 PF00391 PEP-utilising enzyme, mobile domain E2R47_05995 PF02896 PEP-utilising enzyme, TIM barrel domain E2R47_05995 PF01590 GAF domain E2R47_05995 PF05524 PEP-utilising enzyme, N-terminal E2R47_06000 PF01790 Prolipoprotein diacylglyceryl transferase E2R47_06005 PF00303 Thymidylate synthase E2R47_06015 PF07963 Prokaryotic N-terminal methylation motif E2R47_06020 PF07963 Prokaryotic N-terminal methylation motif E2R47_06025 PF10713 Protein of unknown function (DUF2509) E2R47_06030 PF07963 Prokaryotic N-terminal methylation motif E2R47_06030 PF12528 Type II secretion prepilin peptidase dependent protein C E2R47_06035 PF17946 RecC C-terminal domain E2R47_06040 PF16187 Middle or third domain of peptidase_M16 E2R47_06040 PF05193 Peptidase M16 inactive domain E2R47_06040 PF00675 Insulinase (Peptidase family M16) E2R47_06045 PF13361 UvrD-like helicase C-terminal domain E2R47_06045 PF12705 PD-(D/E)XK nuclease superfamily E2R47_06045 PF00580 UvrD/REP helicase N-terminal domain E2R47_06050 PF13538 UvrD-like helicase C-terminal domain E2R47_06055 PF00583 Acetyltransferase (GNAT) family E2R47_06055 PF00696 Amino acid kinase family E2R47_06060 PF11741 AMIN domain E2R47_06060 PF01520 N-acetylmuramoyl-L-alanine amidase E2R47_06075 PF06725 3D domain E2R47_06075 PF03562 MltA specific insert domain E2R47_06080 PF00899 ThiF family E2R47_06085 PF00892 EamA-like transporter family E2R47_06090 PF02657 Fe-S metabolism associated domain E2R47_06095 PF00266 Aminotransferase class-V E2R47_06100 PF06004 Bacterial protein of unknown function (DUF903) E2R47_06105 PF03466 LysR substrate binding domain E2R47_06105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2R47_06110 PF04241 Protein of unknown function (DUF423) E2R47_06115 PF18125 RlmM ferredoxin-like domain E2R47_06115 PF01728 FtsJ-like methyltransferase E2R47_06120 PF08220 DeoR-like helix-turn-helix domain E2R47_06120 PF00455 DeoR C terminal sensor domain E2R47_06125 PF05025 RbsD / FucU transport protein family E2R47_06130 PF00370 FGGY family of carbohydrate kinases, N-terminal domain E2R47_06130 PF02782 FGGY family of carbohydrate kinases, C-terminal domain E2R47_06135 PF02952 L-fucose isomerase, C-terminal domain E2R47_06135 PF07882 L-fucose isomerase, second N-terminal domain E2R47_06135 PF07881 L-fucose isomerase, first N-terminal domain E2R47_06140 PF07690 Major Facilitator Superfamily E2R47_06145 PF00596 Class II Aldolase and Adducin N-terminal domain E2R47_06150 PF00465 Iron-containing alcohol dehydrogenase E2R47_06155 PF01367 5'-3' exonuclease, C-terminal SAM fold E2R47_06155 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain E2R47_06165 PF03313 Serine dehydratase alpha chain E2R47_06165 PF03315 Serine dehydratase beta chain E2R47_06175 PF03641 Possible lysine decarboxylase E2R47_06175 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases E2R47_06175 PF11892 Domain of unknown function (DUF3412) E2R47_06180 PF14489 QueF-like protein E2R47_06180 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term E2R47_06185 PF07348 Syd protein (SUKH-2) E2R47_06195 PF04287 tRNA pseudouridine synthase C E2R47_06200 PF00849 RNA pseudouridylate synthase E2R47_06205 PF00258 Flavodoxin E2R47_06215 PF07690 Major Facilitator Superfamily E2R47_06220 PF13378 Enolase C-terminal domain-like E2R47_06220 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain E2R47_06225 PF13378 Enolase C-terminal domain-like E2R47_06230 PF02595 Glycerate kinase family E2R47_06235 PF00672 HAMP domain E2R47_06235 PF00512 His Kinase A (phospho-acceptor) domain E2R47_06235 PF01627 Hpt domain E2R47_06235 PF00072 Response regulator receiver domain E2R47_06235 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) E2R47_06235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E2R47_06240 PF05958 tRNA (Uracil-5-)-methyltransferase E2R47_06240 PF01938 TRAM domain E2R47_06245 PF04607 Region found in RelA / SpoT proteins E2R47_06245 PF02824 TGS domain E2R47_06245 PF13291 ACT domain E2R47_06265 PF00419 Fimbrial protein E2R47_06270 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain E2R47_06270 PF02753 Pili assembly chaperone PapD, C-terminal domain E2R47_06275 PF13953 PapC C-terminal domain E2R47_06275 PF13954 PapC N-terminal domain E2R47_06275 PF00577 Outer membrane usher protein E2R47_06280 PF00419 Fimbrial protein E2R47_06285 PF03819 MazG nucleotide pyrophosphohydrolase domain E2R47_06290 PF00117 Glutamine amidotransferase class-I E2R47_06290 PF06418 CTP synthase N-terminus E2R47_06295 PF03952 Enolase, N-terminal domain E2R47_06295 PF00113 Enolase, C-terminal TIM barrel domain E2R47_06300 PF04055 Radical SAM superfamily E2R47_06305 PF12706 Beta-lactamase superfamily domain E2R47_06305 PF03099 Biotin/lipoate A/B protein ligase family E2R47_06310 PF01242 6-pyruvoyl tetrahydropterin synthase E2R47_06320 PF00258 Flavodoxin E2R47_06320 PF00667 FAD binding domain E2R47_06320 PF00175 Oxidoreductase NAD-binding domain E2R47_06325 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain E2R47_06325 PF01077 Nitrite and sulphite reductase 4Fe-4S domain E2R47_06335 PF01507 Phosphoadenosine phosphosulfate reductase family E2R47_06340 PF11047 Salmonella outer protein D E2R47_06345 PF18019 HD domain E2R47_06345 PF00271 Helicase conserved C-terminal domain E2R47_06345 PF00270 DEAD/DEAH box helicase E2R47_06360 PF09344 CT1975-like protein E2R47_06365 PF09704 CRISPR-associated protein (Cas_Cas5) E2R47_06375 PF01867 CRISPR associated protein Cas1 E2R47_06380 PF09707 CRISPR-associated protein (Cas_Cas2CT1978) E2R47_06385 PF04389 Peptidase family M28 E2R47_06390 PF01507 Phosphoadenosine phosphosulfate reductase family E2R47_06395 PF00009 Elongation factor Tu GTP binding domain E2R47_06405 PF12084 Protein of unknown function (DUF3561) E2R47_06410 PF04977 Septum formation initiator E2R47_06415 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase E2R47_06420 PF02542 YgbB family E2R47_06425 PF01142 tRNA pseudouridine synthase D (TruD) E2R47_06430 PF01975 Survival protein SurE E2R47_06440 PF01551 Peptidase family M23 E2R47_06440 PF01476 LysM domain E2R47_06445 PF04545 Sigma-70, region 4 E2R47_06445 PF04539 Sigma-70 region 3 E2R47_06445 PF04542 Sigma-70 region 2 E2R47_06445 PF00140 Sigma-70 factor, region 1.2 E2R47_06455 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase E2R47_06460 PF02441 Flavoprotein E2R47_06465 PF01047 MarR family E2R47_06470 PF00455 DeoR C terminal sensor domain E2R47_06470 PF08220 DeoR-like helix-turn-helix domain E2R47_06475 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase E2R47_06475 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase E2R47_06480 PF17042 Nucleotide-binding C-terminal domain E2R47_06480 PF07005 Sugar-binding N-terminal domain E2R47_06485 PF00596 Class II Aldolase and Adducin N-terminal domain E2R47_06490 PF01261 Xylose isomerase-like TIM barrel E2R47_06495 PF01370 NAD dependent epimerase/dehydratase family E2R47_06500 PF02447 GntP family permease E2R47_06505 PF03466 LysR substrate binding domain E2R47_06505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2R47_06510 PF07690 Major Facilitator Superfamily E2R47_06520 PF01624 MutS domain I E2R47_06520 PF05188 MutS domain II E2R47_06520 PF05190 MutS family domain IV E2R47_06520 PF05192 MutS domain III E2R47_06520 PF00488 MutS domain V E2R47_06545 PF00149 Calcineurin-like phosphoesterase E2R47_06580 PF04741 InvH outer membrane lipoprotein E2R47_06585 PF12833 Helix-turn-helix domain E2R47_06595 PF07201 HrpJ-like domain E2R47_06600 PF00771 FHIPEP family E2R47_06605 PF03519 Invasion protein B family E2R47_06610 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain E2R47_06610 PF02874 ATP synthase alpha/beta family, beta-barrel domain E2R47_06610 PF18269 T3SS EscN ATPase C-terminal domain E2R47_06615 PF02090 Salmonella surface presentation of antigen gene type M protein E2R47_06620 PF02510 Surface presentation of antigens protein E2R47_06625 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term E2R47_06630 PF00813 FliP family E2R47_06635 PF01313 Bacterial export proteins, family 3 E2R47_06640 PF01311 Bacterial export proteins, family 1 E2R47_06645 PF01312 FlhB HrpN YscU SpaS Family E2R47_06650 PF07720 Tetratricopeptide repeat E2R47_06655 PF16535 Type III cell invasion protein SipB E2R47_06655 PF04888 Secretion system effector C (SseC) like family E2R47_06660 PF09599 Salmonella-Shigella invasin protein C (IpaC_SipC) E2R47_06665 PF06511 Type III secretion systems tip complex components E2R47_06670 PF09052 SipA N-terminal domain E2R47_06675 PF00550 Phosphopantetheine attachment site E2R47_06685 PF05932 Tir chaperone protein (CesT) family E2R47_06690 PF09119 SicP binding E2R47_06690 PF03545 Yersinia virulence determinant (YopE) E2R47_06690 PF00102 Protein-tyrosine phosphatase E2R47_06695 PF01464 Transglycosylase SLT domain E2R47_06700 PF00486 Transcriptional regulatory protein, C terminal E2R47_06705 PF12833 Helix-turn-helix domain E2R47_06710 PF09480 Type III secretion system protein PrgH-EprH (PrgH) E2R47_06715 PF09392 Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF E2R47_06725 PF01514 Secretory protein of YscJ/FliF family E2R47_06730 PF09482 Bacterial type III secretion apparatus protein (OrgA_MxiK) E2R47_06745 PF12833 Helix-turn-helix domain E2R47_06760 PF00950 ABC 3 transport family E2R47_06765 PF00950 ABC 3 transport family E2R47_06775 PF01297 Zinc-uptake complex component A periplasmic E2R47_06780 PF11756 Nitrous oxide-stimulated promoter E2R47_06785 PF01590 GAF domain E2R47_06785 PF00158 Sigma-54 interaction domain E2R47_06785 PF02954 Bacterial regulatory protein, Fis family E2R47_06790 PF00586 AIR synthase related protein, N-terminal domain E2R47_06790 PF02769 AIR synthase related protein, C-terminal domain E2R47_06795 PF01924 Hydrogenase formation hypA family E2R47_06800 PF01455 HupF/HypC family E2R47_06805 PF02492 CobW/HypB/UreG, nucleotide-binding domain E2R47_06810 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA E2R47_06820 PF11046 Transcriptional repressor of hyc and hyp operons E2R47_06825 PF13247 4Fe-4S dicluster domain E2R47_06830 PF00361 Proton-conducting membrane transporter E2R47_06835 PF00146 NADH dehydrogenase E2R47_06840 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit E2R47_06840 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit E2R47_06840 PF00374 Nickel-dependent hydrogenase E2R47_06845 PF12838 4Fe-4S dicluster domain E2R47_06850 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit E2R47_06855 PF07450 Formate hydrogenlyase maturation protein HycH E2R47_06860 PF01750 Hydrogenase maturation protease E2R47_06870 PF13247 4Fe-4S dicluster domain E2R47_06870 PF12800 4Fe-4S binding domain E2R47_06875 PF17788 HypF Kae1-like domain E2R47_06875 PF00708 Acylphosphatase E2R47_06875 PF01300 Telomere recombination E2R47_06875 PF07503 HypF finger E2R47_06880 PF07992 Pyridine nucleotide-disulphide oxidoreductase E2R47_06880 PF18113 Rubredoxin binding C-terminal domain E2R47_06885 PF00301 Rubredoxin E2R47_06885 PF00753 Metallo-beta-lactamase superfamily E2R47_06885 PF00258 Flavodoxin E2R47_06890 PF00158 Sigma-54 interaction domain E2R47_06890 PF01590 GAF domain E2R47_06895 PF01380 SIS domain E2R47_06895 PF00571 CBS domain E2R47_06900 PF08220 DeoR-like helix-turn-helix domain E2R47_06900 PF00455 DeoR C terminal sensor domain E2R47_06905 PF06923 Glucitol operon activator protein (GutM) E2R47_06910 PF00106 short chain dehydrogenase E2R47_06915 PF03829 PTS system glucitol/sorbitol-specific IIA component E2R47_06920 PF03612 Sorbitol phosphotransferase enzyme II N-terminus E2R47_06920 PF07663 Sorbitol phosphotransferase enzyme II C-terminus E2R47_06925 PF03608 PTS system enzyme II sorbitol-specific factor E2R47_06930 PF13406 Transglycosylase SLT domain E2R47_06940 PF02464 Competence-damaged protein E2R47_06945 PF00154 recA bacterial DNA recombination protein E2R47_06950 PF02631 RecX family E2R47_06960 PF01411 tRNA synthetases class II (A) E2R47_06960 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain E2R47_06960 PF02272 DHHA1 domain E2R47_06965 PF02599 Global regulator protein family E2R47_06995 PF13419 Haloacid dehalogenase-like hydrolase E2R47_07000 PF09335 SNARE associated Golgi protein E2R47_07005 PF04262 Glutamate-cysteine ligase E2R47_07010 PF02664 S-Ribosylhomocysteinase (LuxS) E2R47_07020 PF07690 Major Facilitator Superfamily E2R47_07025 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion E2R47_07025 PF00529 HlyD membrane-fusion protein of T1SS E2R47_07030 PF01047 MarR family E2R47_07035 PF07690 Major Facilitator Superfamily E2R47_07040 PF04069 Substrate binding domain of ABC-type glycine betaine transport system E2R47_07045 PF00528 Binding-protein-dependent transport system inner membrane component E2R47_07050 PF00571 CBS domain E2R47_07050 PF00005 ABC transporter E2R47_07060 PF00268 Ribonucleotide reductase, small chain E2R47_07065 PF00317 Ribonucleotide reductase, all-alpha domain E2R47_07065 PF02867 Ribonucleotide reductase, barrel domain E2R47_07065 PF08343 Ribonucleotide reductase N-terminal E2R47_07070 PF07972 NrdI Flavodoxin like E2R47_07075 PF00462 Glutaredoxin E2R47_07085 PF02627 Carboxymuconolactone decarboxylase family E2R47_07090 PF00155 Aminotransferase class I and II E2R47_07090 PF00392 Bacterial regulatory proteins, gntR family E2R47_07095 PF05957 Bacterial protein of unknown function (DUF883) E2R47_07100 PF09400 Protein of unknown function (DUF2002) E2R47_07105 PF06610 L-alanine exporter E2R47_07115 PF00816 H-NS histone family E2R47_07125 PF00581 Rhodanese-like domain E2R47_07125 PF11127 Protein of unknown function (DUF2892) E2R47_07130 PF01022 Bacterial regulatory protein, arsR family E2R47_07135 PF01679 Proteolipid membrane potential modulator E2R47_07145 PF01476 LysM domain E2R47_07145 PF04972 BON domain E2R47_07150 PF07729 FCD domain E2R47_07150 PF00392 Bacterial regulatory proteins, gntR family E2R47_07155 PF00324 Amino acid permease E2R47_07160 PF00202 Aminotransferase class-III E2R47_07165 PF00171 Aldehyde dehydrogenase family E2R47_07170 PF01266 FAD dependent oxidoreductase E2R47_07175 PF08943 CsiD E2R47_07180 PF01970 Tripartite tricarboxylate transporter TctA family E2R47_07195 PF00072 Response regulator receiver domain E2R47_07195 PF00486 Transcriptional regulatory protein, C terminal E2R47_07200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E2R47_07200 PF00512 His Kinase A (phospho-acceptor) domain E2R47_07200 PF08521 Two-component sensor kinase N-terminal E2R47_07205 PF03824 High-affinity nickel-transport protein E2R47_07220 PF04393 Protein of unknown function (DUF535) E2R47_07225 PF00805 Pentapeptide repeats (8 copies) E2R47_07240 PF07715 TonB-dependent Receptor Plug Domain E2R47_07240 PF00593 TonB dependent receptor E2R47_07245 PF00756 Putative esterase E2R47_07255 PF00664 ABC transporter transmembrane region E2R47_07255 PF00005 ABC transporter E2R47_07260 PF06722 Protein of unknown function (DUF1205) E2R47_07270 PF00239 Resolvase, N terminal domain E2R47_07270 PF02796 Helix-turn-helix domain of resolvase E2R47_07275 PF00669 Bacterial flagellin N-terminal helical region E2R47_07275 PF00700 Bacterial flagellin C-terminal helical region E2R47_07275 PF08884 Flagellin D3 domain E2R47_07280 PF03614 Repressor of phase-1 flagellin E2R47_07300 PF00529 HlyD membrane-fusion protein of T1SS E2R47_07300 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion E2R47_07305 PF00664 ABC transporter transmembrane region E2R47_07305 PF00005 ABC transporter E2R47_07320 PF01668 SmpB protein E2R47_07325 PF03364 Polyketide cyclase / dehydrase and lipid transport E2R47_07330 PF03658 RnfH family Ubiquitin E2R47_07335 PF04355 SmpA / OmlA family E2R47_07340 PF02463 RecF/RecN/SMC N terminal domain E2R47_07345 PF01513 ATP-NAD kinase E2R47_07355 PF01025 GrpE E2R47_07365 PF03471 Transporter associated domain E2R47_07365 PF01595 Cyclin M transmembrane N-terminal domain E2R47_07365 PF00571 CBS domain E2R47_07370 PF01578 Cytochrome C assembly protein E2R47_07380 PF00448 SRP54-type protein, GTPase domain E2R47_07380 PF02978 Signal peptide binding domain E2R47_07380 PF02881 SRP54-type protein, helical bundle domain E2R47_07385 PF00886 Ribosomal protein S16 E2R47_07390 PF05239 PRC-barrel domain E2R47_07390 PF01782 RimM N-terminal domain E2R47_07395 PF01746 tRNA (Guanine-1)-methyltransferase E2R47_07400 PF01245 Ribosomal protein L19 E2R47_07405 PF00990 Diguanylate cyclase, GGDEF domain E2R47_07405 PF17152 Periplasmic sensor domain E2R47_07410 PF13689 YfiR/HmsC-like E2R47_07415 PF00793 DAHP synthetase I family E2R47_07420 PF02153 Prephenate dehydrogenase E2R47_07420 PF01817 Chorismate mutase type II E2R47_07425 PF08450 SMP-30/Gluconolactonase/LRE-like region E2R47_07430 PF00800 Prephenate dehydratase E2R47_07430 PF01817 Chorismate mutase type II E2R47_07440 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein E2R47_07450 PF13525 Outer membrane lipoprotein E2R47_07455 PF00849 RNA pseudouridylate synthase E2R47_07455 PF01479 S4 domain E2R47_07465 PF17871 AAA lid domain E2R47_07465 PF07724 AAA domain (Cdc48 subfamily) E2R47_07465 PF10431 C-terminal, D2-small domain, of ClpB protein E2R47_07465 PF02861 Clp amino terminal domain, pathogenicity island component E2R47_07465 PF00004 ATPase family associated with various cellular activities (AAA) E2R47_07500 PF00083 Sugar (and other) transporter E2R47_07505 PF10043 Predicted periplasmic lipoprotein (DUF2279) E2R47_07510 PF13091 PLD-like domain E2R47_07515 PF13607 Succinyl-CoA ligase like flavodoxin domain E2R47_07515 PF13380 CoA binding domain E2R47_07515 PF00583 Acetyltransferase (GNAT) family E2R47_07525 PF00085 Thioredoxin E2R47_07530 PF00588 SpoU rRNA Methylase family E2R47_07530 PF08032 RNA 2'-O ribose methyltransferase substrate binding E2R47_07535 PF03167 Uracil DNA glycosylase superfamily E2R47_07540 PF01228 Glycine radical E2R47_07545 PF01810 LysE type translocator E2R47_07550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2R47_07550 PF03466 LysR substrate binding domain E2R47_07555 PF00271 Helicase conserved C-terminal domain E2R47_07555 PF00270 DEAD/DEAH box helicase E2R47_07560 PF05175 Methyltransferase small domain E2R47_07565 PF02910 Fumarate reductase flavoprotein C-term E2R47_07565 PF00890 FAD binding domain E2R47_07580 PF04542 Sigma-70 region 2 E2R47_07580 PF08281 Sigma-70, region 4 E2R47_07585 PF03872 Anti sigma-E protein RseA, N-terminal domain E2R47_07585 PF03873 Anti sigma-E protein RseA, C-terminal domain E2R47_07590 PF03888 MucB/RseB N-terminal domain E2R47_07590 PF17188 MucB/RseB C-terminal domain E2R47_07605 PF06421 GTP-binding protein LepA C-terminus E2R47_07605 PF00009 Elongation factor Tu GTP binding domain E2R47_07605 PF03144 Elongation factor Tu domain 2 E2R47_07605 PF00679 Elongation factor G C-terminus E2R47_07610 PF10502 Signal peptidase, peptidase S26 E2R47_07615 PF14622 Ribonuclease-III-like E2R47_07615 PF00035 Double-stranded RNA binding motif E2R47_07620 PF07650 KH domain E2R47_07620 PF01926 50S ribosome-binding GTPase E2R47_07625 PF02565 Recombination protein O C terminal E2R47_07625 PF11967 Recombination protein O N terminal E2R47_07630 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ E2R47_07635 PF01648 4'-phosphopantetheinyl transferase superfamily E2R47_07640 PF12838 4Fe-4S dicluster domain E2R47_07645 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2R47_07645 PF03466 LysR substrate binding domain E2R47_07650 PF07690 Major Facilitator Superfamily E2R47_07655 PF08546 Ketopantoate reductase PanE/ApbA C terminal E2R47_07655 PF02558 Ketopantoate reductase PanE/ApbA E2R47_07660 PF01380 SIS domain E2R47_07660 PF01418 Helix-turn-helix domain, rpiR family E2R47_07665 PF01380 SIS domain E2R47_07670 PF00367 phosphotransferase system, EIIB E2R47_07670 PF02378 Phosphotransferase system, EIIC E2R47_07680 PF14437 MafB19-like deaminase E2R47_07685 PF00497 Bacterial extracellular solute-binding proteins, family 3 E2R47_07685 PF01464 Transglycosylase SLT domain E2R47_07695 PF02769 AIR synthase related protein, C-terminal domain E2R47_07695 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain E2R47_07695 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal E2R47_07700 PF00512 His Kinase A (phospho-acceptor) domain E2R47_07700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E2R47_07705 PF13942 YfhG lipoprotein E2R47_07710 PF00158 Sigma-54 interaction domain E2R47_07710 PF00072 Response regulator receiver domain E2R47_07715 PF00543 Nitrogen regulatory protein P-II E2R47_07720 PF00854 POT family E2R47_07725 PF01276 Orn/Lys/Arg decarboxylase, major domain E2R47_07725 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain E2R47_07725 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain E2R47_07730 PF13520 Amino acid permease E2R47_07735 PF18500 CadC C-terminal domain 1 E2R47_07735 PF00486 Transcriptional regulatory protein, C terminal E2R47_07740 PF00042 Globin E2R47_07740 PF00970 Oxidoreductase FAD-binding domain E2R47_07740 PF00175 Oxidoreductase NAD-binding domain E2R47_07745 PF00464 Serine hydroxymethyltransferase E2R47_07750 PF12832 MFS_1 like family E2R47_07755 PF00874 PRD domain E2R47_07765 PF03824 High-affinity nickel-transport protein E2R47_07770 PF13187 4Fe-4S dicluster domain E2R47_07770 PF01077 Nitrite and sulphite reductase 4Fe-4S domain E2R47_07770 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain E2R47_07775 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B E2R47_07775 PF00175 Oxidoreductase NAD-binding domain E2R47_07780 PF17179 4Fe-4S dicluster domain E2R47_07785 PF12146 Serine aminopeptidase, S33 E2R47_07790 PF00459 Inositol monophosphatase family E2R47_07795 PF00588 SpoU rRNA Methylase family E2R47_07800 PF02082 Transcriptional regulator E2R47_07805 PF00266 Aminotransferase class-V E2R47_07810 PF01592 NifU-like N terminal domain E2R47_07815 PF01521 Iron-sulphur cluster biosynthesis E2R47_07820 PF07743 HSCB C-terminal oligomerisation domain E2R47_07825 PF00012 Hsp70 protein E2R47_07830 PF00111 2Fe-2S iron-sulfur cluster binding domain E2R47_07835 PF04384 Iron-sulphur cluster assembly E2R47_07840 PF00883 Cytosol aminopeptidase family, catalytic domain E2R47_07840 PF12404 Peptidase E2R47_07845 PF14581 SseB protein C-terminal domain E2R47_07845 PF07179 SseB protein N-terminal domain E2R47_07860 PF00581 Rhodanese-like domain E2R47_07865 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain E2R47_07865 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain E2R47_07865 PF07678 A-macroglobulin TED domain E2R47_07865 PF01835 MG2 domain E2R47_07865 PF17962 Bacterial macroglobulin domain 6 E2R47_07865 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain E2R47_07865 PF11974 Bacterial alpha-2-macroglobulin MG3 domain E2R47_07865 PF00207 Alpha-2-macroglobulin family E2R47_07865 PF07703 Alpha-2-macroglobulin bait region domain E2R47_07870 PF00905 Penicillin binding protein transpeptidase domain E2R47_07870 PF06832 Penicillin-Binding Protein C-terminus Family E2R47_07870 PF00912 Transglycosylase E2R47_07875 PF00384 Molybdopterin oxidoreductase E2R47_07875 PF04879 Molybdopterin oxidoreductase Fe4S4 domain E2R47_07875 PF01568 Molydopterin dinucleotide binding domain E2R47_07880 PF13247 4Fe-4S dicluster domain E2R47_07880 PF12800 4Fe-4S binding domain E2R47_07895 PF00334 Nucleoside diphosphate kinase E2R47_07900 PF04055 Radical SAM superfamily E2R47_07905 PF13464 Domain of unknown function (DUF4115) E2R47_07910 PF04551 GcpE protein E2R47_07915 PF03129 Anticodon binding domain E2R47_07915 PF13393 Histidyl-tRNA synthetase E2R47_07920 PF09976 Tetratricopeptide repeat-like domain E2R47_07925 PF13360 PQQ-like domain E2R47_07930 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal E2R47_07930 PF01926 50S ribosome-binding GTPase E2R47_07935 PF07191 zinc-ribbons E2R47_07940 PF01476 LysM domain E2R47_07940 PF02369 Bacterial Ig-like domain (group 1) E2R47_07940 PF07979 Intimin C-type lectin domain E2R47_07940 PF02368 Bacterial Ig-like domain (group 2) E2R47_07940 PF11924 Inverse autotransporter, beta-domain E2R47_07960 PF03797 Autotransporter beta-domain E2R47_07965 PF02601 Exonuclease VII, large subunit E2R47_07965 PF13742 OB-fold nucleic acid binding domain E2R47_07970 PF00571 CBS domain E2R47_07970 PF00478 IMP dehydrogenase / GMP reductase domain E2R47_07975 PF02540 NAD synthase E2R47_07975 PF00958 GMP synthase C terminal domain E2R47_07975 PF00117 Glutamine amidotransferase class-I E2R47_08000 PF11119 Protein of unknown function (DUF2633) E2R47_08010 PF00563 EAL domain E2R47_08010 PF05231 MASE1 E2R47_08015 PF02541 Ppx/GppA phosphatase family E2R47_08020 PF13089 Polyphosphate kinase N-terminal domain E2R47_08020 PF02503 Polyphosphate kinase middle domain E2R47_08020 PF17941 Polyphosphate kinase C-terminal domain 1 E2R47_08020 PF13090 Polyphosphate kinase C-terminal domain 2 E2R47_08025 PF00551 Formyl transferase E2R47_08030 PF02769 AIR synthase related protein, C-terminal domain E2R47_08030 PF00586 AIR synthase related protein, N-terminal domain E2R47_08045 PF00860 Permease family E2R47_08050 PF00308 Bacterial dnaA protein E2R47_08055 PF03960 ArsC family E2R47_08060 PF01435 Peptidase family M48 E2R47_08065 PF01594 AI-2E family transporter E2R47_08070 PF05651 Putative sugar diacid recognition E2R47_08070 PF17853 GGDEF-like domain E2R47_08070 PF13556 PucR C-terminal helix-turn-helix domain E2R47_08075 PF02447 GntP family permease E2R47_08080 PF02595 Glycerate kinase family E2R47_08085 PF00578 AhpC/TSA family E2R47_08090 PF01842 ACT domain E2R47_08095 PF00701 Dihydrodipicolinate synthetase family E2R47_08100 PF06804 NlpB/DapX lipoprotein E2R47_08105 PF01259 SAICAR synthetase E2R47_08110 PF04228 Putative neutral zinc metallopeptidase E2R47_08115 PF05127 Helicase E2R47_08115 PF17176 tRNA-binding domain E2R47_08115 PF08351 Domain of unknown function (DUF1726) E2R47_08115 PF13718 GNAT acetyltransferase 2 E2R47_08120 PF13980 Uncharacterised protein family (UPF0370) E2R47_08125 PF07687 Peptidase dimerisation domain E2R47_08125 PF01546 Peptidase family M20/M25/M40 E2R47_08130 PF03960 ArsC family E2R47_08140 PF00873 AcrB/AcrD/AcrF family E2R47_08145 PF00672 HAMP domain E2R47_08145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E2R47_08145 PF07730 Histidine kinase E2R47_08145 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term E2R47_08150 PF13247 4Fe-4S dicluster domain E2R47_08150 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster E2R47_08150 PF07992 Pyridine nucleotide-disulphide oxidoreductase E2R47_08155 PF00144 Beta-lactamase E2R47_08160 PF00293 NUDIX domain E2R47_08165 PF06674 Protein of unknown function (DUF1176) E2R47_08175 PF02780 Transketolase, C-terminal domain E2R47_08175 PF00456 Transketolase, thiamine diphosphate binding domain E2R47_08175 PF02779 Transketolase, pyrimidine binding domain E2R47_08180 PF00923 Transaldolase/Fructose-6-phosphate aldolase E2R47_08185 PF00390 Malic enzyme, N-terminal domain E2R47_08185 PF03949 Malic enzyme, NAD binding domain E2R47_08185 PF01515 Phosphate acetyl/butaryl transferase E2R47_08190 PF00936 BMC domain E2R47_08195 PF10662 Ethanolamine utilisation - propanediol utilisation E2R47_08200 PF06249 Ethanolamine utilisation protein EutQ E2R47_08205 PF01923 Cobalamin adenosyltransferase E2R47_08210 PF01515 Phosphate acetyl/butaryl transferase E2R47_08215 PF00936 BMC domain E2R47_08220 PF03319 Ethanolamine utilisation protein EutN/carboxysome E2R47_08225 PF00171 Aldehyde dehydrogenase family E2R47_08235 PF00465 Iron-containing alcohol dehydrogenase E2R47_08240 PF04346 Ethanolamine utilisation protein, EutH E2R47_08245 PF06277 Ethanolamine utilisation protein EutA E2R47_08250 PF06751 Ethanolamine ammonia lyase large subunit (EutB) E2R47_08255 PF05985 Ethanolamine ammonia-lyase light chain (EutC) E2R47_08260 PF00936 BMC domain E2R47_08265 PF00936 BMC domain E2R47_08265 PF16365 Ethanolamine utilization protein EutK C-terminus E2R47_08270 PF12833 Helix-turn-helix domain E2R47_08285 PF01218 Coproporphyrinogen III oxidase E2R47_08290 PF01520 N-acetylmuramoyl-L-alanine amidase E2R47_08295 PF00583 Acetyltransferase (GNAT) family E2R47_08300 PF11143 Protein of unknown function (DUF2919) E2R47_08305 PF06572 Protein of unknown function (DUF1131) E2R47_08310 PF04261 Dyp-type peroxidase family E2R47_08325 PF00528 Binding-protein-dependent transport system inner membrane component E2R47_08330 PF00528 Binding-protein-dependent transport system inner membrane component E2R47_08335 PF00005 ABC transporter E2R47_08340 PF00291 Pyridoxal-phosphate dependent enzyme E2R47_08350 PF17263 Family of unknown function (DUF5329) E2R47_08355 PF00117 Glutamine amidotransferase class-I E2R47_08360 PF00392 Bacterial regulatory proteins, gntR family E2R47_08360 PF00155 Aminotransferase class I and II E2R47_08365 PF08543 Phosphomethylpyrimidine kinase E2R47_08375 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 E2R47_08380 PF02896 PEP-utilising enzyme, TIM barrel domain E2R47_08380 PF05524 PEP-utilising enzyme, N-terminal E2R47_08380 PF00391 PEP-utilising enzyme, mobile domain E2R47_08385 PF00381 PTS HPr component phosphorylation site E2R47_08390 PF00291 Pyridoxal-phosphate dependent enzyme E2R47_08400 PF04354 ZipA, C-terminal FtsZ-binding domain E2R47_08405 PF03119 NAD-dependent DNA ligase C4 zinc finger domain E2R47_08405 PF01653 NAD-dependent DNA ligase adenylation domain E2R47_08405 PF12826 Helix-hairpin-helix motif E2R47_08405 PF03120 NAD-dependent DNA ligase OB-fold domain E2R47_08405 PF00533 BRCA1 C Terminus (BRCT) domain E2R47_08410 PF12843 Putative quorum-sensing-regulated virulence factor E2R47_08415 PF13593 SBF-like CPA transporter family (DUF4137) E2R47_08420 PF03466 LysR substrate binding domain E2R47_08420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2R47_08425 PF03502 Nucleoside-specific channel-forming protein, Tsx E2R47_08430 PF01048 Phosphorylase superfamily E2R47_08435 PF03825 Nucleoside H+ symporter E2R47_08445 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2R47_08445 PF03466 LysR substrate binding domain E2R47_08470 PF00749 tRNA synthetases class I (E and Q), catalytic domain E2R47_08475 PF07037 Putative transcription regulator (DUF1323) E2R47_08480 PF07037 Putative transcription regulator (DUF1323) E2R47_08495 PF05231 MASE1 E2R47_08495 PF00563 EAL domain E2R47_08500 PF07670 Nucleoside recognition E2R47_08500 PF07662 Na+ dependent nucleoside transporter C-terminus E2R47_08500 PF01773 Na+ dependent nucleoside transporter N-terminus E2R47_08505 PF01566 Natural resistance-associated macrophage protein E2R47_08510 PF10697 Protein of unknown function (DUF2502) E2R47_08515 PF00248 Aldo/keto reductase family E2R47_08525 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain E2R47_08525 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain E2R47_08525 PF00205 Thiamine pyrophosphate enzyme, central domain E2R47_08530 PF00654 Voltage gated chloride channel E2R47_08535 PF02685 Glucokinase E2R47_08540 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit E2R47_08545 PF02378 Phosphotransferase system, EIIC E2R47_08550 PF01321 Creatinase/Prolidase N-terminal domain E2R47_08550 PF00557 Metallopeptidase family M24 E2R47_08555 PF05343 M42 glutamyl aminopeptidase E2R47_08560 PF00391 PEP-utilising enzyme, mobile domain E2R47_08560 PF05524 PEP-utilising enzyme, N-terminal E2R47_08560 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 E2R47_08560 PF02896 PEP-utilising enzyme, TIM barrel domain E2R47_08560 PF00381 PTS HPr component phosphorylation site E2R47_08565 PF12833 Helix-turn-helix domain E2R47_08570 PF00155 Aminotransferase class I and II E2R47_08580 PF03279 Bacterial lipid A biosynthesis acyltransferase E2R47_08585 PF10810 Protein of unknown function (DUF2545) E2R47_08590 PF07690 Major Facilitator Superfamily E2R47_08605 PF00512 His Kinase A (phospho-acceptor) domain E2R47_08605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E2R47_08605 PF00672 HAMP domain E2R47_08610 PF00072 Response regulator receiver domain E2R47_08610 PF14532 Sigma-54 interaction domain E2R47_08610 PF02954 Bacterial regulatory protein, Fis family E2R47_08615 PF01278 Omptin family E2R47_08625 PF01226 Formate/nitrite transporter E2R47_08630 PF04333 MlaA lipoprotein E2R47_08635 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) E2R47_08640 PF04175 Protein of unknown function (DUF406) E2R47_08645 PF00108 Thiolase, N-terminal domain E2R47_08645 PF02803 Thiolase, C-terminal domain E2R47_08650 PF00378 Enoyl-CoA hydratase/isomerase E2R47_08650 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain E2R47_08650 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain E2R47_08655 PF00300 Histidine phosphatase superfamily (branch 1) E2R47_08660 PF01713 Smr domain E2R47_08665 PF05175 Methyltransferase small domain E2R47_08670 PF01264 Chorismate synthase E2R47_08675 PF03411 Penicillin-insensitive murein endopeptidase E2R47_08680 PF01925 Sulfite exporter TauE/SafE E2R47_08685 PF04315 Elongation factor P hydroxylase E2R47_08690 PF08891 YfcL protein E2R47_08695 PF01266 FAD dependent oxidoreductase E2R47_08695 PF05430 S-adenosyl-L-methionine-dependent methyltransferase E2R47_08700 PF02801 Beta-ketoacyl synthase, C-terminal domain E2R47_08700 PF00109 Beta-ketoacyl synthase, N-terminal domain E2R47_08705 PF02517 CPBP intramembrane metalloprotease E2R47_08720 PF13693 Winged helix-turn-helix DNA-binding E2R47_08730 PF07690 Major Facilitator Superfamily E2R47_08740 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain E2R47_08740 PF11890 Domain of unknown function (DUF3410) E2R47_08740 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain E2R47_08745 PF02774 Semialdehyde dehydrogenase, dimerisation domain E2R47_08745 PF01118 Semialdehyde dehydrogenase, NAD binding domain E2R47_08750 PF01416 tRNA pseudouridine synthase E2R47_08755 PF09335 SNARE associated Golgi protein E2R47_08760 PF01039 Carboxyl transferase domain E2R47_08760 PF17848 Acetyl-coA carboxylase zinc finger domain E2R47_08765 PF02875 Mur ligase family, glutamate ligase domain E2R47_08765 PF08245 Mur ligase middle domain E2R47_08770 PF05036 Sporulation related domain E2R47_08775 PF02674 Colicin V production protein E2R47_08780 PF00156 Phosphoribosyl transferase domain E2R47_08785 PF13426 PAS domain E2R47_08785 PF02954 Bacterial regulatory protein, Fis family E2R47_08785 PF00158 Sigma-54 interaction domain E2R47_08790 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain E2R47_08790 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain E2R47_08795 PF13520 Amino acid permease E2R47_08800 PF01168 Alanine racemase, N-terminal domain E2R47_08805 PF00324 Amino acid permease E2R47_08810 PF02441 Flavoprotein E2R47_08820 PF00497 Bacterial extracellular solute-binding proteins, family 3 E2R47_08825 PF00497 Bacterial extracellular solute-binding proteins, family 3 E2R47_08830 PF00528 Binding-protein-dependent transport system inner membrane component E2R47_08835 PF00528 Binding-protein-dependent transport system inner membrane component E2R47_08840 PF00005 ABC transporter E2R47_08845 PF01370 NAD dependent epimerase/dehydratase family E2R47_08845 PF08338 Domain of unknown function (DUF1731) E2R47_08850 PF00043 Glutathione S-transferase, C-terminal domain E2R47_08850 PF02798 Glutathione S-transferase, N-terminal domain E2R47_08855 PF02798 Glutathione S-transferase, N-terminal domain E2R47_08855 PF14834 Glutathione S-transferase, C-terminal domain E2R47_08860 PF12850 Calcineurin-like phosphoesterase superfamily domain E2R47_08865 PF00293 NUDIX domain E2R47_08870 PF00356 Bacterial regulatory proteins, lacI family E2R47_08880 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 E2R47_08890 PF03611 PTS system sugar-specific permease component E2R47_08895 PF00456 Transketolase, thiamine diphosphate binding domain E2R47_08900 PF02780 Transketolase, C-terminal domain E2R47_08900 PF02779 Transketolase, pyrimidine binding domain E2R47_08900 PF13292 1-deoxy-D-xylulose-5-phosphate synthase E2R47_08905 PF03606 C4-dicarboxylate anaerobic carrier E2R47_08910 PF01515 Phosphate acetyl/butaryl transferase E2R47_08910 PF07085 DRTGG domain E2R47_08915 PF00871 Acetokinase family E2R47_08925 PF04217 Protein of unknown function, DUF412 E2R47_08930 PF03887 YfbU domain E2R47_08935 PF13419 Haloacid dehalogenase-like hydrolase E2R47_08940 PF03600 Citrate transporter E2R47_08940 PF02080 TrkA-C domain E2R47_08955 PF00155 Aminotransferase class I and II E2R47_08965 PF03466 LysR substrate binding domain E2R47_08965 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2R47_08975 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 E2R47_08980 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit E2R47_08985 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit E2R47_08985 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit E2R47_08995 PF10531 SLBB domain E2R47_08995 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region E2R47_08995 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit E2R47_09000 PF00384 Molybdopterin oxidoreductase E2R47_09000 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region E2R47_09000 PF04879 Molybdopterin oxidoreductase Fe4S4 domain E2R47_09000 PF01568 Molydopterin dinucleotide binding domain E2R47_09005 PF00146 NADH dehydrogenase E2R47_09010 PF12838 4Fe-4S dicluster domain E2R47_09015 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 E2R47_09020 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L E2R47_09025 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus E2R47_09025 PF00361 Proton-conducting membrane transporter E2R47_09030 PF00361 Proton-conducting membrane transporter E2R47_09035 PF00361 Proton-conducting membrane transporter E2R47_09040 PF03797 Autotransporter beta-domain E2R47_09045 PF12450 von Willebrand factor E2R47_09045 PF00092 von Willebrand factor type A domain E2R47_09045 PF12034 Domain of unknown function (DUF3520) E2R47_09050 PF01584 CheW-like domain E2R47_09050 PF00072 Response regulator receiver domain E2R47_09055 PF12706 Beta-lactamase superfamily domain E2R47_09060 PF13673 Acetyltransferase (GNAT) domain E2R47_09065 PF05957 Bacterial protein of unknown function (DUF883) E2R47_09070 PF00425 chorismate binding enzyme E2R47_09075 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain E2R47_09075 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain E2R47_09075 PF16582 Middle domain of thiamine pyrophosphate E2R47_09080 PF12697 Alpha/beta hydrolase family E2R47_09085 PF00378 Enoyl-CoA hydratase/isomerase E2R47_09090 PF13378 Enolase C-terminal domain-like E2R47_09095 PF13193 AMP-binding enzyme C-terminal domain E2R47_09095 PF00501 AMP-binding enzyme E2R47_09110 PF00892 EamA-like transporter family E2R47_09115 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase E2R47_09120 PF01522 Polysaccharide deacetylase E2R47_09125 PF01370 NAD dependent epimerase/dehydratase family E2R47_09125 PF02911 Formyl transferase, C-terminal domain E2R47_09125 PF00551 Formyl transferase E2R47_09130 PF00535 Glycosyl transferase family 2 E2R47_09135 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family E2R47_09140 PF00300 Histidine phosphatase superfamily (branch 1) E2R47_09145 PF00293 NUDIX domain E2R47_09150 PF07437 YfaZ precursor E2R47_09155 PF00994 Probable molybdopterin binding domain E2R47_09170 PF13183 4Fe-4S dicluster domain E2R47_09170 PF02754 Cysteine-rich domain E2R47_09175 PF00890 FAD binding domain E2R47_09180 PF01266 FAD dependent oxidoreductase E2R47_09180 PF04324 BFD-like [2Fe-2S] binding domain E2R47_09185 PF07690 Major Facilitator Superfamily E2R47_09190 PF03009 Glycerophosphoryl diester phosphodiesterase family E2R47_09195 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2R47_09195 PF03466 LysR substrate binding domain E2R47_09200 PF07690 Major Facilitator Superfamily E2R47_09205 PF00111 2Fe-2S iron-sulfur cluster binding domain E2R47_09210 PF00268 Ribonucleotide reductase, small chain E2R47_09215 PF03477 ATP cone domain E2R47_09215 PF02867 Ribonucleotide reductase, barrel domain E2R47_09215 PF00317 Ribonucleotide reductase, all-alpha domain E2R47_09230 PF07690 Major Facilitator Superfamily E2R47_09235 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain E2R47_09235 PF13378 Enolase C-terminal domain-like E2R47_09240 PF00521 DNA gyrase/topoisomerase IV, subunit A E2R47_09240 PF03989 DNA gyrase C-terminal domain, beta-propeller E2R47_09245 PF00512 His Kinase A (phospho-acceptor) domain E2R47_09245 PF00072 Response regulator receiver domain E2R47_09245 PF09456 RcsC Alpha-Beta-Loop (ABL) E2R47_09245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E2R47_09250 PF00072 Response regulator receiver domain E2R47_09250 PF00196 Bacterial regulatory proteins, luxR family E2R47_09255 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E2R47_09255 PF16359 RcsD-ABL domain E2R47_09255 PF01627 Hpt domain E2R47_09260 PF00267 Gram-negative porin E2R47_09265 PF02424 ApbE family E2R47_09270 PF12833 Helix-turn-helix domain E2R47_09270 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain E2R47_09270 PF02805 Metal binding domain of Ada E2R47_09270 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain E2R47_09275 PF13532 2OG-Fe(II) oxygenase superfamily E2R47_09280 PF00005 ABC transporter E2R47_09285 PF03974 Ecotin E2R47_09290 PF12800 4Fe-4S binding domain E2R47_09290 PF00037 4Fe-4S binding domain E2R47_09290 PF13187 4Fe-4S dicluster domain E2R47_09295 PF03927 NapD protein E2R47_09300 PF04879 Molybdopterin oxidoreductase Fe4S4 domain E2R47_09300 PF00384 Molybdopterin oxidoreductase E2R47_09300 PF01568 Molydopterin dinucleotide binding domain E2R47_09305 PF12838 4Fe-4S dicluster domain E2R47_09305 PF12800 4Fe-4S binding domain E2R47_09310 PF12801 4Fe-4S binding domain E2R47_09310 PF13237 4Fe-4S dicluster domain E2R47_09315 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) E2R47_09320 PF03264 NapC/NirT cytochrome c family, N-terminal region E2R47_09325 PF00005 ABC transporter E2R47_09330 PF03379 CcmB protein E2R47_09335 PF01578 Cytochrome C assembly protein E2R47_09340 PF04995 Heme exporter protein D (CcmD) E2R47_09345 PF03100 CcmE E2R47_09350 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal E2R47_09350 PF01578 Cytochrome C assembly protein E2R47_09355 PF08534 Redoxin E2R47_09360 PF03918 Cytochrome C biogenesis protein E2R47_09365 PF00196 Bacterial regulatory proteins, luxR family E2R47_09365 PF00072 Response regulator receiver domain E2R47_09395 PF00884 Sulfatase E2R47_09395 PF11893 Domain of unknown function (DUF3413) E2R47_09400 PF07208 Protein of unknown function (DUF1414) E2R47_09405 PF04245 37-kD nucleoid-associated bacterial protein E2R47_09415 PF01386 Ribosomal L25p family E2R47_09420 PF04851 Type III restriction enzyme, res subunit E2R47_09420 PF00271 Helicase conserved C-terminal domain E2R47_09425 PF01479 S4 domain E2R47_09425 PF00849 RNA pseudouridylate synthase E2R47_09430 PF07690 Major Facilitator Superfamily E2R47_09435 PF13989 YejG-like protein E2R47_09440 PF00005 ABC transporter E2R47_09440 PF08352 Oligopeptide/dipeptide transporter, C-terminal region E2R47_09445 PF00528 Binding-protein-dependent transport system inner membrane component E2R47_09445 PF12911 N-terminal TM domain of oligopeptide transport permease C E2R47_09450 PF00528 Binding-protein-dependent transport system inner membrane component E2R47_09455 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle E2R47_09460 PF00563 EAL domain E2R47_09460 PF12792 CSS motif domain associated with EAL E2R47_09465 PF00877 NlpC/P60 family E2R47_09470 PF01569 PAP2 superfamily E2R47_09475 PF07683 Cobalamin synthesis protein cobW C-terminal domain E2R47_09475 PF02492 CobW/HypB/UreG, nucleotide-binding domain E2R47_09480 PF09285 Elongation factor P, C-terminal E2R47_09480 PF01132 Elongation factor P (EF-P) OB domain E2R47_09480 PF08207 Elongation factor P (EF-P) KOW-like domain E2R47_09485 PF03692 Putative zinc- or iron-chelating domain E2R47_09500 PF07690 Major Facilitator Superfamily E2R47_09505 PF00381 PTS HPr component phosphorylation site E2R47_09505 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 E2R47_09510 PF00294 pfkB family carbohydrate kinase E2R47_09515 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit E2R47_09515 PF02378 Phosphotransferase system, EIIC E2R47_09520 PF01261 Xylose isomerase-like TIM barrel E2R47_09525 PF03601 Conserved hypothetical protein 698 E2R47_09530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2R47_09530 PF03466 LysR substrate binding domain E2R47_09535 PF00324 Amino acid permease E2R47_09545 PF00593 TonB dependent receptor E2R47_09545 PF07715 TonB-dependent Receptor Plug Domain E2R47_09550 PF07690 Major Facilitator Superfamily E2R47_09555 PF18429 Domain of unknown function (DUF5609) E2R47_09560 PF03313 Serine dehydratase alpha chain E2R47_09560 PF03315 Serine dehydratase beta chain E2R47_09570 PF00756 Putative esterase E2R47_09575 PF01227 GTP cyclohydrolase I E2R47_09580 PF04235 Protein of unknown function (DUF418) E2R47_09585 PF00356 Bacterial regulatory proteins, lacI family E2R47_09590 PF13407 Periplasmic binding protein domain E2R47_09595 PF00005 ABC transporter E2R47_09600 PF02653 Branched-chain amino acid transport system / permease component E2R47_09605 PF01180 Dihydroorotate dehydrogenase E2R47_09610 PF07992 Pyridine nucleotide-disulphide oxidoreductase E2R47_09610 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster E2R47_09615 PF10808 Protein of unknown function (DUF2542) E2R47_09620 PF02698 DUF218 domain E2R47_09625 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region E2R47_09625 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region E2R47_09630 PF04172 LrgB-like family E2R47_09635 PF03788 LrgA family E2R47_09640 PF03466 LysR substrate binding domain E2R47_09640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2R47_09645 PF07690 Major Facilitator Superfamily E2R47_09650 PF07883 Cupin domain E2R47_09655 PF01557 Fumarylacetoacetate (FAA) hydrolase family E2R47_09660 PF02798 Glutathione S-transferase, N-terminal domain E2R47_09660 PF14497 Glutathione S-transferase, C-terminal domain E2R47_09665 PF01494 FAD binding domain E2R47_09670 PF01207 Dihydrouridine synthase (Dus) E2R47_09680 PF02321 Outer membrane efflux protein E2R47_09690 PF09335 SNARE associated Golgi protein E2R47_09695 PF04893 Yip1 domain E2R47_09700 PF00768 D-alanyl-D-alanine carboxypeptidase E2R47_09705 PF01565 FAD binding domain E2R47_09705 PF09330 D-lactate dehydrogenase, membrane binding E2R47_09710 PF14310 Fibronectin type III-like domain E2R47_09710 PF00933 Glycosyl hydrolase family 3 N terminal domain E2R47_09710 PF01915 Glycosyl hydrolase family 3 C-terminal domain E2R47_09715 PF04069 Substrate binding domain of ABC-type glycine betaine transport system E2R47_09720 PF00528 Binding-protein-dependent transport system inner membrane component E2R47_09725 PF00005 ABC transporter E2R47_09730 PF00528 Binding-protein-dependent transport system inner membrane component E2R47_09740 PF13411 MerR HTH family regulatory protein E2R47_09745 PF07694 5TMR of 5TMR-LYT E2R47_09745 PF06580 Histidine kinase E2R47_09750 PF00072 Response regulator receiver domain E2R47_09750 PF04397 LytTr DNA-binding domain E2R47_09755 PF07308 Protein of unknown function (DUF1456) E2R47_09765 PF06998 Protein of unknown function (DUF1307) E2R47_09770 PF09334 tRNA synthetases class I (M) E2R47_09770 PF01588 Putative tRNA binding domain E2R47_09775 PF10609 NUBPL iron-transfer P-loop NTPase E2R47_09790 PF02753 Pili assembly chaperone PapD, C-terminal domain E2R47_09790 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain E2R47_09800 PF00419 Fimbrial protein E2R47_09805 PF11776 Nickel/cobalt transporter regulator E2R47_09810 PF02110 Hydroxyethylthiazole kinase family E2R47_09815 PF08543 Phosphomethylpyrimidine kinase E2R47_09820 PF00392 Bacterial regulatory proteins, gntR family E2R47_09820 PF07702 UTRA domain E2R47_09825 PF00294 pfkB family carbohydrate kinase E2R47_09830 PF03747 ADP-ribosylglycohydrolase E2R47_09835 PF03825 Nucleoside H+ symporter E2R47_09840 PF01791 DeoC/LacD family aldolase E2R47_09845 PF00781 Diacylglycerol kinase catalytic domain E2R47_09855 PF05932 Tir chaperone protein (CesT) family E2R47_09890 PF00072 Response regulator receiver domain E2R47_09890 PF00486 Transcriptional regulatory protein, C terminal E2R47_09895 PF00672 HAMP domain E2R47_09895 PF00512 His Kinase A (phospho-acceptor) domain E2R47_09895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E2R47_09900 PF07690 Major Facilitator Superfamily E2R47_09905 PF00873 AcrB/AcrD/AcrF family E2R47_09910 PF00873 AcrB/AcrD/AcrF family E2R47_09915 PF13533 Biotin-lipoyl like E2R47_09925 PF00012 Hsp70 protein E2R47_09930 PF06029 AlkA N-terminal domain E2R47_09930 PF00730 HhH-GPD superfamily base excision DNA repair protein E2R47_09935 PF08448 PAS fold E2R47_09935 PF00563 EAL domain E2R47_09935 PF08447 PAS fold E2R47_09935 PF05231 MASE1 E2R47_09935 PF00990 Diguanylate cyclase, GGDEF domain E2R47_09935 PF13426 PAS domain E2R47_09940 PF00485 Phosphoribulokinase / Uridine kinase family E2R47_09945 PF00692 dUTPase E2R47_09950 PF05170 AsmA family E2R47_09955 PF03741 Integral membrane protein TerC family E2R47_09955 PF00571 CBS domain E2R47_09955 PF03471 Transporter associated domain E2R47_09960 PF02563 Polysaccharide biosynthesis/export protein E2R47_09960 PF18412 Outer-membrane lipoprotein Wza C-terminal domain E2R47_09960 PF10531 SLBB domain E2R47_09965 PF01451 Low molecular weight phosphotyrosine protein phosphatase E2R47_09970 PF02706 Chain length determinant protein E2R47_09970 PF13807 G-rich domain on putative tyrosine kinase E2R47_09970 PF13614 AAA domain E2R47_09975 PF00535 Glycosyl transferase family 2 E2R47_09980 PF00132 Bacterial transferase hexapeptide (six repeats) E2R47_09985 PF00534 Glycosyl transferases group 1 E2R47_09985 PF13439 Glycosyltransferase Family 4 E2R47_09995 PF00535 Glycosyl transferase family 2 E2R47_10000 PF00132 Bacterial transferase hexapeptide (six repeats) E2R47_10005 PF16363 GDP-mannose 4,6 dehydratase E2R47_10010 PF01370 NAD dependent epimerase/dehydratase family E2R47_10015 PF00293 NUDIX domain E2R47_10020 PF00534 Glycosyl transferases group 1 E2R47_10020 PF13579 Glycosyl transferase 4-like domain E2R47_10025 PF00483 Nucleotidyl transferase E2R47_10025 PF01050 Mannose-6-phosphate isomerase E2R47_10030 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain E2R47_10030 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III E2R47_10030 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II E2R47_10030 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I E2R47_10035 PF02397 Bacterial sugar transferase E2R47_10045 PF04230 Polysaccharide pyruvyl transferase E2R47_10050 PF00534 Glycosyl transferases group 1 E2R47_10050 PF13439 Glycosyltransferase Family 4 E2R47_10060 PF00483 Nucleotidyl transferase E2R47_10065 PF16363 GDP-mannose 4,6 dehydratase E2R47_10070 PF04321 RmlD substrate binding domain E2R47_10075 PF00483 Nucleotidyl transferase E2R47_10080 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase E2R47_10085 PF00175 Oxidoreductase NAD-binding domain E2R47_10085 PF00111 2Fe-2S iron-sulfur cluster binding domain E2R47_10085 PF00970 Oxidoreductase FAD-binding domain E2R47_10090 PF00483 Nucleotidyl transferase E2R47_10095 PF16363 GDP-mannose 4,6 dehydratase E2R47_10100 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family E2R47_10105 PF01370 NAD dependent epimerase/dehydratase family E2R47_10115 PF00535 Glycosyl transferase family 2 E2R47_10125 PF00535 Glycosyl transferase family 2 E2R47_10130 PF04932 O-Antigen ligase E2R47_10135 PF00534 Glycosyl transferases group 1 E2R47_10135 PF13439 Glycosyltransferase Family 4 E2R47_10140 PF00534 Glycosyl transferases group 1 E2R47_10140 PF13439 Glycosyltransferase Family 4 E2R47_10145 PF00483 Nucleotidyl transferase E2R47_10145 PF01050 Mannose-6-phosphate isomerase E2R47_10150 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II E2R47_10150 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I E2R47_10150 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III E2R47_10150 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain E2R47_10155 PF02397 Bacterial sugar transferase E2R47_10160 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain E2R47_10160 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase E2R47_10170 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain E2R47_10170 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain E2R47_10175 PF02706 Chain length determinant protein E2R47_10180 PF01502 Phosphoribosyl-AMP cyclohydrolase E2R47_10180 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase E2R47_10185 PF00977 Histidine biosynthesis protein E2R47_10190 PF00977 Histidine biosynthesis protein E2R47_10195 PF00117 Glutamine amidotransferase class-I E2R47_10200 PF00475 Imidazoleglycerol-phosphate dehydratase E2R47_10205 PF00155 Aminotransferase class I and II E2R47_10210 PF00815 Histidinol dehydrogenase E2R47_10215 PF08029 HisG, C-terminal domain E2R47_10215 PF01634 ATP phosphoribosyltransferase E2R47_10225 PF01370 NAD dependent epimerase/dehydratase family E2R47_10230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2R47_10230 PF03466 LysR substrate binding domain E2R47_10240 PF13520 Amino acid permease E2R47_10245 PF00929 Exonuclease E2R47_10245 PF08411 Exonuclease C-terminal E2R47_10250 PF13979 SopA-like catalytic domain E2R47_10250 PF13981 SopA-like central domain E2R47_10260 PF04879 Molybdopterin oxidoreductase Fe4S4 domain E2R47_10260 PF00384 Molybdopterin oxidoreductase E2R47_10260 PF01568 Molydopterin dinucleotide binding domain E2R47_10265 PF13247 4Fe-4S dicluster domain E2R47_10265 PF12800 4Fe-4S binding domain E2R47_10270 PF01292 Prokaryotic cytochrome b561 E2R47_10275 PF00768 D-alanyl-D-alanine carboxypeptidase E2R47_10275 PF07943 Penicillin-binding protein 5, C-terminal domain E2R47_10280 PF06445 GyrI-like small molecule binding domain E2R47_10285 PF04632 Fusaric acid resistance protein family E2R47_10290 PF04363 Protein of unknown function (DUF496) E2R47_10295 PF00288 GHMP kinases N terminal domain E2R47_10300 PF00871 Acetokinase family E2R47_10305 PF10662 Ethanolamine utilisation - propanediol utilisation E2R47_10310 PF00936 BMC domain E2R47_10320 PF13237 4Fe-4S dicluster domain E2R47_10320 PF10531 SLBB domain E2R47_10320 PF13375 RnfC Barrel sandwich hybrid domain E2R47_10320 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit E2R47_10325 PF00465 Iron-containing alcohol dehydrogenase E2R47_10325 PF00171 Aldehyde dehydrogenase family E2R47_10330 PF00171 Aldehyde dehydrogenase family E2R47_10335 PF01923 Cobalamin adenosyltransferase E2R47_10340 PF03319 Ethanolamine utilisation protein EutN/carboxysome E2R47_10350 PF06130 Phosphate propanoyltransferase E2R47_10355 PF00936 BMC domain E2R47_10360 PF00936 BMC domain E2R47_10370 PF08841 Diol dehydratase reactivase ATPase-like domain E2R47_10370 PF18427 DD-reactivating factor swiveling domain E2R47_10375 PF02287 Dehydratase small subunit E2R47_10380 PF02288 Dehydratase medium subunit E2R47_10385 PF02286 Dehydratase large subunit E2R47_10390 PF00936 BMC domain E2R47_10395 PF00936 BMC domain E2R47_10400 PF00230 Major intrinsic protein E2R47_10405 PF12833 Helix-turn-helix domain E2R47_10405 PF10114 Sensory domain found in PocR E2R47_10410 PF07685 CobB/CobQ-like glutamine amidotransferase domain E2R47_10410 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain E2R47_10415 PF03186 CobD/Cbib protein E2R47_10420 PF02570 Precorrin-8X methylmutase E2R47_10425 PF01888 CbiD E2R47_10430 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases E2R47_10435 PF05175 Methyltransferase small domain E2R47_10440 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases E2R47_10445 PF11761 Cobalamin biosynthesis central region E2R47_10445 PF11760 Cobalamin synthesis G N-terminal E2R47_10445 PF01890 Cobalamin synthesis G C-terminus E2R47_10450 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases E2R47_10455 PF02571 Precorrin-6x reductase CbiJ/CobK E2R47_10460 PF06180 Cobalt chelatase (CbiK) E2R47_10465 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases E2R47_10470 PF01891 Cobalt uptake substrate-specific transmembrane region E2R47_10475 PF02553 Cobalt transport protein component CbiN E2R47_10480 PF02361 Cobalt transport protein E2R47_10485 PF00005 ABC transporter E2R47_10490 PF07685 CobB/CobQ-like glutamine amidotransferase domain E2R47_10495 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase E2R47_10500 PF02654 Cobalamin-5-phosphate synthase E2R47_10505 PF02277 Phosphoribosyltransferase E2R47_10510 PF17969 L,D-transpeptidase C-terminal domain E2R47_10510 PF03734 L,D-transpeptidase catalytic domain E2R47_10520 PF01554 MatE E2R47_10565 PF14220 Domain of unknown function (DUF4329) E2R47_10565 PF05593 RHS Repeat E2R47_10565 PF03527 RHS protein E2R47_10575 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus E2R47_10575 PF01048 Phosphorylase superfamily E2R47_10585 PF02525 Flavodoxin-like fold E2R47_10590 PF01638 HxlR-like helix-turn-helix E2R47_10605 PF00589 Phage integrase family E2R47_10605 PF13356 Arm DNA-binding domain E2R47_10615 PF06167 Glucose-regulated metallo-peptidase M90 E2R47_10635 PF00717 Peptidase S24-like E2R47_10640 PF00817 impB/mucB/samB family E2R47_10640 PF11799 impB/mucB/samB family C-terminal domain E2R47_10640 PF13438 Domain of unknown function (DUF4113) E2R47_10645 PF00313 'Cold-shock' DNA-binding domain E2R47_10655 PF00267 Gram-negative porin E2R47_10665 PF01966 HD domain E2R47_10670 PF00145 C-5 cytosine-specific DNA methylase E2R47_10670 PF18284 DNA methylase N-terminal domain E2R47_10675 PF03852 DNA mismatch endonuclease Vsr E2R47_10680 PF00892 EamA-like transporter family E2R47_10685 PF05661 Protein of unknown function (DUF808) E2R47_10690 PF09926 Uncharacterized small protein (DUF2158) E2R47_10695 PF17151 Periplasmic sensor domain E2R47_10695 PF00990 Diguanylate cyclase, GGDEF domain E2R47_10705 PF10733 Protein of unknown function (DUF2525) E2R47_10710 PF10781 Dextransucrase DSRB E2R47_10715 PF00196 Bacterial regulatory proteins, luxR family E2R47_10720 PF01311 Bacterial export proteins, family 1 E2R47_10725 PF01313 Bacterial export proteins, family 3 E2R47_10730 PF00813 FliP family E2R47_10735 PF04347 Flagellar biosynthesis protein, FliO E2R47_10740 PF16973 Flagellar motor switch protein FliN N-terminal E2R47_10740 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term E2R47_10745 PF02154 Flagellar motor switch protein FliM E2R47_10745 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term E2R47_10750 PF03748 Flagellar basal body-associated protein FliL E2R47_10755 PF02120 Flagellar hook-length control protein FliK E2R47_10760 PF02050 Flagellar FliJ protein E2R47_10765 PF18269 T3SS EscN ATPase C-terminal domain E2R47_10765 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain E2R47_10770 PF02108 Flagellar assembly protein FliH E2R47_10775 PF01706 FliG C-terminal domain E2R47_10775 PF14841 FliG middle domain E2R47_10775 PF14842 FliG N-terminal domain E2R47_10780 PF01514 Secretory protein of YscJ/FliF family E2R47_10780 PF08345 Flagellar M-ring protein C-terminal E2R47_10785 PF02049 Flagellar hook-basal body complex protein FliE E2R47_10795 PF01206 Sulfurtransferase TusA E2R47_10800 PF04143 Sulphur transport E2R47_10805 PF13987 YedD-like protein E2R47_10815 PF05400 Flagellar protein FliT E2R47_10820 PF02561 Flagellar protein FliS E2R47_10825 PF07196 Flagellin hook IN motif E2R47_10825 PF07195 Flagellar hook-associated protein 2 C-terminus E2R47_10825 PF02465 Flagellar hook-associated protein 2 N-terminus E2R47_10830 PF00700 Bacterial flagellin C-terminal helical region E2R47_10830 PF08884 Flagellin D3 domain E2R47_10830 PF00669 Bacterial flagellin N-terminal helical region E2R47_10840 PF04542 Sigma-70 region 2 E2R47_10840 PF04539 Sigma-70 region 3 E2R47_10840 PF04545 Sigma-70, region 4 E2R47_10845 PF02899 Phage integrase, N-terminal SAM-like domain E2R47_10855 PF00291 Pyridoxal-phosphate dependent enzyme E2R47_10870 PF00196 Bacterial regulatory proteins, luxR family E2R47_10870 PF03472 Autoinducer binding domain E2R47_10875 PF10769 Protein of unknown function (DUF2594) E2R47_10885 PF00196 Bacterial regulatory proteins, luxR family E2R47_10885 PF00072 Response regulator receiver domain E2R47_10890 PF01541 GIY-YIG catalytic domain E2R47_10890 PF08459 UvrC Helix-hairpin-helix N-terminal E2R47_10890 PF02151 UvrB/uvrC motif E2R47_10895 PF01066 CDP-alcohol phosphatidyltransferase E2R47_10930 PF03695 Uncharacterised protein family (UPF0149) E2R47_10930 PF02810 SEC-C motif E2R47_10935 PF03222 Tryptophan/tyrosine permease family E2R47_10940 PF10678 Protein of unknown function (DUF2492) E2R47_10945 PF00210 Ferritin-like domain E2R47_10950 PF13992 YecR-like lipoprotein E2R47_10960 PF00210 Ferritin-like domain E2R47_10975 PF02358 Trehalose-phosphatase E2R47_10980 PF00982 Glycosyltransferase family 20 E2R47_10985 PF00582 Universal stress protein family E2R47_10995 PF05247 Flagellar transcriptional activator (FlhD) E2R47_11000 PF05280 Flagellar transcriptional activator (FlhC) E2R47_11005 PF01618 MotA/TolQ/ExbB proton channel family E2R47_11010 PF00691 OmpA family E2R47_11010 PF13677 Membrane MotB of proton-channel complex MotA/MotB E2R47_11015 PF09078 CheY binding E2R47_11015 PF01584 CheW-like domain E2R47_11015 PF01627 Hpt domain E2R47_11015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E2R47_11015 PF02895 Signal transducing histidine kinase, homodimeric domain E2R47_11020 PF01584 CheW-like domain E2R47_11025 PF02203 Tar ligand binding domain homologue E2R47_11025 PF00672 HAMP domain E2R47_11025 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E2R47_11030 PF03705 CheR methyltransferase, all-alpha domain E2R47_11030 PF01739 CheR methyltransferase, SAM binding domain E2R47_11035 PF00072 Response regulator receiver domain E2R47_11035 PF01339 CheB methylesterase E2R47_11040 PF00072 Response regulator receiver domain E2R47_11045 PF04344 Chemotaxis phosphatase, CheZ E2R47_11050 PF01312 FlhB HrpN YscU SpaS Family E2R47_11055 PF00771 FHIPEP family E2R47_11060 PF06366 Flagellar protein FlhE E2R47_11065 PF07470 Glycosyl Hydrolase Family 88 E2R47_11070 PF03717 Penicillin-binding Protein dimerisation domain E2R47_11070 PF00905 Penicillin binding protein transpeptidase domain E2R47_11075 PF05746 DALR anticodon binding domain E2R47_11075 PF03485 Arginyl tRNA synthetase N terminal domain E2R47_11075 PF00750 tRNA synthetases class I (R) E2R47_11080 PF06185 YecM protein E2R47_11085 PF03932 CutC family E2R47_11090 PF08003 Protein of unknown function (DUF1698) E2R47_11095 PF13649 Methyltransferase domain E2R47_11100 PF01124 MAPEG family E2R47_11105 PF01904 Protein of unknown function DUF72 E2R47_11110 PF00857 Isochorismatase family E2R47_11115 PF02938 GAD domain E2R47_11115 PF00152 tRNA synthetases class II (D, K and N) E2R47_11115 PF01336 OB-fold nucleic acid binding domain E2R47_11120 PF00293 NUDIX domain E2R47_11125 PF01709 Transcriptional regulator E2R47_11130 PF02075 Crossover junction endodeoxyribonuclease RuvC E2R47_11135 PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family E2R47_11145 PF01330 RuvA N terminal domain E2R47_11145 PF07499 RuvA, C-terminal domain E2R47_11150 PF17864 RuvB AAA lid domain E2R47_11150 PF05491 RuvB C-terminal winged helix domain E2R47_11150 PF05496 Holliday junction DNA helicase RuvB P-loop domain E2R47_11155 PF00950 ABC 3 transport family E2R47_11160 PF00005 ABC transporter E2R47_11165 PF01297 Zinc-uptake complex component A periplasmic E2R47_11170 PF01476 LysM domain E2R47_11170 PF01551 Peptidase family M23 E2R47_11170 PF08525 Opacity-associated protein A N-terminal motif E2R47_11175 PF03279 Bacterial lipid A biosynthesis acyltransferase E2R47_11180 PF00224 Pyruvate kinase, barrel domain E2R47_11180 PF02887 Pyruvate kinase, alpha/beta domain E2R47_11185 PF01418 Helix-turn-helix domain, rpiR family E2R47_11185 PF01380 SIS domain E2R47_11195 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain E2R47_11195 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain E2R47_11200 PF00920 Dehydratase family E2R47_11205 PF01081 KDPG and KHG aldolase E2R47_11210 PF02222 ATP-grasp domain E2R47_11215 PF07130 YebG protein E2R47_11220 PF13995 YebF-like protein E2R47_11225 PF04391 Protein of unknown function (DUF533) E2R47_11230 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain E2R47_11230 PF00326 Prolyl oligopeptidase family E2R47_11235 PF00929 Exonuclease E2R47_11240 PF00795 Carbon-nitrogen hydrolase E2R47_11245 PF06440 DNA polymerase III, theta subunit E2R47_11250 PF04234 CopC domain E2R47_11255 PF05425 Copper resistance protein D E2R47_11260 PF10709 Protein of unknown function (DUF2511) E2R47_11265 PF00589 Phage integrase family E2R47_11265 PF09003 Bacteriophage lambda integrase, Arm DNA-binding domain E2R47_11340 PF00563 EAL domain E2R47_11340 PF00360 Phytochrome region E2R47_11340 PF00990 Diguanylate cyclase, GGDEF domain E2R47_11340 PF01590 GAF domain E2R47_11345 PF14863 Alkyl sulfatase dimerisation E2R47_11345 PF14864 Alkyl sulfatase C-terminal E2R47_11345 PF00753 Metallo-beta-lactamase superfamily E2R47_11365 PF00892 EamA-like transporter family E2R47_11390 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) E2R47_11390 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain E2R47_11390 PF02824 TGS domain E2R47_11390 PF03129 Anticodon binding domain E2R47_11400 PF00583 Acetyltransferase (GNAT) family E2R47_11455 PF07166 Protein of unknown function (DUF1398) E2R47_11460 PF05364 Salmonella type III secretion SopE effector N-terminus E2R47_11460 PF07487 SopE GEF domain E2R47_11470 PF00149 Calcineurin-like phosphoesterase E2R47_11475 PF07358 Protein of unknown function (DUF1482) E2R47_11480 PF07351 Protein of unknown function (DUF1480) E2R47_11485 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF E2R47_11485 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF E2R47_11485 PF01189 16S rRNA methyltransferase RsmB/F E2R47_11490 PF02470 MlaD protein E2R47_11495 PF04403 Paraquat-inducible protein A E2R47_11500 PF13185 GAF domain E2R47_11505 PF17516 ProQ C-terminal domain E2R47_11505 PF04352 ProQ/FINO family E2R47_11510 PF11818 C-terminal domain of tail specific protease (DUF3340) E2R47_11510 PF00595 PDZ domain E2R47_11510 PF03572 Peptidase family S41 E2R47_11510 PF17804 Tail specific protease N-terminal domain E2R47_11515 PF01435 Peptidase family M48 E2R47_11520 PF07690 Major Facilitator Superfamily E2R47_11525 PF01614 Bacterial transcriptional regulator E2R47_11525 PF09339 IclR helix-turn-helix domain E2R47_11530 PF13996 YobH-like protein E2R47_11535 PF13998 MgrB protein E2R47_11540 PF13974 YebO-like protein E2R47_11545 PF10736 Protein of unknown function (DUF2627) E2R47_11550 PF00313 'Cold-shock' DNA-binding domain E2R47_11555 PF00905 Penicillin binding protein transpeptidase domain E2R47_11555 PF03717 Penicillin-binding Protein dimerisation domain E2R47_11560 PF13847 Methyltransferase domain E2R47_11565 PF02659 Putative manganese efflux pump E2R47_11570 PF06173 Protein of unknown function (DUF986) E2R47_11575 PF03613 PTS system mannose/fructose/sorbose family IID component E2R47_11580 PF03609 PTS system sorbose-specific iic component E2R47_11585 PF03830 PTS system sorbose subfamily IIB component E2R47_11585 PF03610 PTS system fructose IIA component E2R47_11590 PF03741 Integral membrane protein TerC family E2R47_11590 PF03471 Transporter associated domain E2R47_11595 PF00563 EAL domain E2R47_11595 PF12792 CSS motif domain associated with EAL E2R47_11600 PF03315 Serine dehydratase beta chain E2R47_11600 PF03313 Serine dehydratase alpha chain E2R47_11605 PF00293 NUDIX domain E2R47_11610 PF00425 chorismate binding enzyme E2R47_11610 PF04715 Anthranilate synthase component I, N terminal region E2R47_11615 PF03701 Uncharacterised protein family (UPF0181) E2R47_11620 PF01042 Endoribonuclease L-PSP E2R47_11625 PF13307 Helicase C-terminal domain E2R47_11625 PF04851 Type III restriction enzyme, res subunit E2R47_11630 PF00814 Glycoprotease family E2R47_11635 PF03843 Outer membrane lipoprotein Slp family E2R47_11640 PF00501 AMP-binding enzyme E2R47_11640 PF13193 AMP-binding enzyme C-terminal domain E2R47_11645 PF00570 HRDC domain E2R47_11645 PF01612 3'-5' exonuclease E2R47_11650 PF03776 Septum formation topological specificity factor MinE E2R47_11655 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain E2R47_11660 PF05209 Septum formation inhibitor MinC, N-terminal domain E2R47_11660 PF03775 Septum formation inhibitor MinC, C-terminal domain E2R47_11665 PF05166 YcgL domain E2R47_11670 PF01557 Fumarylacetoacetate (FAA) hydrolase family E2R47_11675 PF03692 Putative zinc- or iron-chelating domain E2R47_11685 PF08178 GnsA/GnsB toxin of bacterial toxin-antitoxin system E2R47_11695 PF02600 Disulfide bond formation protein DsbB E2R47_11700 PF06450 Bacterial Na+/H+ antiporter B (NhaB) E2R47_11705 PF00392 Bacterial regulatory proteins, gntR family E2R47_11705 PF07840 FadR C-terminal domain E2R47_11710 PF04293 SpoVR like protein E2R47_11715 PF01266 FAD dependent oxidoreductase E2R47_11720 PF01168 Alanine racemase, N-terminal domain E2R47_11720 PF00842 Alanine racemase, C-terminal domain E2R47_11725 PF02080 TrkA-C domain E2R47_11725 PF03471 Transporter associated domain E2R47_11725 PF00999 Sodium/hydrogen exchanger family E2R47_11730 PF17676 LD-carboxypeptidase C-terminal domain E2R47_11730 PF02016 LD-carboxypeptidase N-terminal domain E2R47_11735 PF01464 Transglycosylase SLT domain E2R47_11740 PF07317 Flagellar regulator YcgR E2R47_11740 PF07238 PilZ domain E2R47_11745 PF04226 Transglycosylase associated protein E2R47_11750 PF01204 Trehalase E2R47_11755 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase E2R47_11755 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain E2R47_11760 PF08173 Membrane bound YbgT-like protein E2R47_11765 PF02322 Cytochrome bd terminal oxidase subunit II E2R47_11770 PF01654 Cytochrome bd terminal oxidase subunit I E2R47_11775 PF04809 HupH hydrogenase expression protein, C-terminal conserved region E2R47_11780 PF07449 Hydrogenase-1 expression protein HyaE E2R47_11785 PF01750 Hydrogenase maturation protease E2R47_11790 PF01292 Prokaryotic cytochrome b561 E2R47_11795 PF00374 Nickel-dependent hydrogenase E2R47_11800 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal E2R47_11800 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit E2R47_11820 PF06071 Protein of unknown function (DUF933) E2R47_11820 PF01926 50S ribosome-binding GTPase E2R47_11825 PF01195 Peptidyl-tRNA hydrolase E2R47_11830 PF10762 Protein of unknown function (DUF2583) E2R47_11835 PF00916 Sulfate permease family E2R47_11835 PF01740 STAS domain E2R47_11840 PF14572 Phosphoribosyl synthetase-associated domain E2R47_11840 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase E2R47_11845 PF08544 GHMP kinases C terminal E2R47_11845 PF00288 GHMP kinases N terminal domain E2R47_11850 PF03550 Outer membrane lipoprotein LolB E2R47_11855 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain E2R47_11855 PF01488 Shikimate / quinate 5-dehydrogenase E2R47_11855 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain E2R47_11860 PF00472 RF-1 domain E2R47_11860 PF03462 PCRF domain E2R47_11865 PF17827 PrmC N-terminal domain E2R47_11865 PF13847 Methyltransferase domain E2R47_11870 PF04247 Invasion gene expression up-regulator, SirB E2R47_11875 PF13369 Transglutaminase-like superfamily E2R47_11880 PF00793 DAHP synthetase I family E2R47_11885 PF01699 Sodium/calcium exchanger protein E2R47_11890 PF06150 ChaB E2R47_11895 PF02635 DsrE/DsrF-like family E2R47_11900 PF11924 Inverse autotransporter, beta-domain E2R47_11905 PF00196 Bacterial regulatory proteins, luxR family E2R47_11905 PF00072 Response regulator receiver domain E2R47_11910 PF00672 HAMP domain E2R47_11910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E2R47_11910 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term E2R47_11910 PF07730 Histidine kinase E2R47_11920 PF07690 Major Facilitator Superfamily E2R47_11925 PF01568 Molydopterin dinucleotide binding domain E2R47_11925 PF14710 Respiratory nitrate reductase alpha N-terminal E2R47_11925 PF00384 Molybdopterin oxidoreductase E2R47_11930 PF13247 4Fe-4S dicluster domain E2R47_11930 PF14711 Respiratory nitrate reductase beta C-terminal E2R47_11935 PF02613 Nitrate reductase delta subunit E2R47_11940 PF02665 Nitrate reductase gamma subunit E2R47_11980 PF00551 Formyl transferase E2R47_11980 PF01842 ACT domain E2R47_11985 PF02810 SEC-C motif E2R47_11990 PF01734 Patatin-like phospholipase E2R47_11995 PF00072 Response regulator receiver domain E2R47_12000 PF00483 Nucleotidyl transferase E2R47_12005 PF00816 H-NS histone family E2R47_12010 PF00265 Thymidine kinase E2R47_12015 PF00465 Iron-containing alcohol dehydrogenase E2R47_12015 PF00171 Aldehyde dehydrogenase family E2R47_12020 PF01914 MarC family integral membrane protein E2R47_12030 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle E2R47_12035 PF00528 Binding-protein-dependent transport system inner membrane component E2R47_12040 PF00528 Binding-protein-dependent transport system inner membrane component E2R47_12040 PF12911 N-terminal TM domain of oligopeptide transport permease C E2R47_12045 PF00005 ABC transporter E2R47_12045 PF08352 Oligopeptide/dipeptide transporter, C-terminal region E2R47_12050 PF08352 Oligopeptide/dipeptide transporter, C-terminal region E2R47_12050 PF00005 ABC transporter E2R47_12055 PF00027 Cyclic nucleotide-binding domain E2R47_12055 PF00520 Ion transport protein E2R47_12060 PF04269 Protein of unknown function, DUF440 E2R47_12065 PF13091 PLD-like domain E2R47_12065 PF13396 Phospholipase_D-nuclease N-terminal E2R47_12075 PF03795 YCII-related domain E2R47_12080 PF03544 Gram-negative bacterial TonB protein C-terminal E2R47_12085 PF03061 Thioesterase superfamily E2R47_12090 PF04279 Intracellular septation protein A E2R47_12100 PF03692 Putative zinc- or iron-chelating domain E2R47_12105 PF03922 OmpW family E2R47_12110 PF05067 Manganese containing catalase E2R47_12115 PF05974 Domain of unknown function (DUF892) E2R47_12120 PF05974 Domain of unknown function (DUF892) E2R47_12125 PF10685 Stress-induced bacterial acidophilic repeat motif E2R47_12130 PF00290 Tryptophan synthase alpha chain E2R47_12135 PF00291 Pyridoxal-phosphate dependent enzyme E2R47_12140 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase E2R47_12140 PF00218 Indole-3-glycerol phosphate synthase E2R47_12145 PF00117 Glutamine amidotransferase class-I E2R47_12145 PF00591 Glycosyl transferase family, a/b domain E2R47_12145 PF02885 Glycosyl transferase family, helical bundle domain E2R47_12150 PF04715 Anthranilate synthase component I, N terminal region E2R47_12150 PF00425 chorismate binding enzyme E2R47_12155 PF08255 Trp-operon Leader Peptide E2R47_12160 PF02811 PHP domain E2R47_12165 PF01300 Telomere recombination E2R47_12170 PF01479 S4 domain E2R47_12170 PF00849 RNA pseudouridylate synthase E2R47_12175 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP E2R47_12180 PF00106 short chain dehydrogenase E2R47_12185 PF08496 Peptidase family S49 N-terminal E2R47_12185 PF01343 Peptidase family S49 E2R47_12190 PF10692 Protein of unknown function (DUF2498) E2R47_12195 PF01396 Topoisomerase DNA binding C4 zinc finger E2R47_12195 PF08272 Topoisomerase I zinc-ribbon-like E2R47_12195 PF01131 DNA topoisomerase E2R47_12195 PF01751 Toprim domain E2R47_12200 PF03466 LysR substrate binding domain E2R47_12200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2R47_12220 PF00330 Aconitase family (aconitate hydratase) E2R47_12220 PF00694 Aconitase C-terminal domain E2R47_12225 PF00925 GTP cyclohydrolase II E2R47_12230 PF01569 PAP2 superfamily E2R47_12235 PF06305 Lipopolysaccharide assembly protein A domain E2R47_12240 PF18073 Rubredoxin metal binding domain E2R47_12245 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family E2R47_12250 PF01253 Translation initiation factor SUI1 E2R47_12255 PF05433 Glycine zipper 2TM domain E2R47_12260 PF08220 DeoR-like helix-turn-helix domain E2R47_12260 PF00455 DeoR C terminal sensor domain E2R47_12270 PF13426 PAS domain E2R47_12270 PF00990 Diguanylate cyclase, GGDEF domain E2R47_12270 PF00563 EAL domain E2R47_12275 PF17876 Cold shock domain E2R47_12275 PF08206 Ribonuclease B OB domain E2R47_12275 PF00773 RNB domain E2R47_12275 PF00575 S1 RNA binding domain E2R47_12310 PF00005 ABC transporter E2R47_12315 PF00005 ABC transporter E2R47_12315 PF08352 Oligopeptide/dipeptide transporter, C-terminal region E2R47_12320 PF00528 Binding-protein-dependent transport system inner membrane component E2R47_12320 PF12911 N-terminal TM domain of oligopeptide transport permease C E2R47_12365 PF00528 Binding-protein-dependent transport system inner membrane component E2R47_12370 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle E2R47_12375 PF02954 Bacterial regulatory protein, Fis family E2R47_12375 PF00158 Sigma-54 interaction domain E2R47_12380 PF04012 PspA/IM30 family E2R47_12385 PF06667 Phage shock protein B E2R47_12390 PF04024 PspC domain E2R47_12395 PF09584 Phage shock protein PspD (Phageshock_PspD) E2R47_12400 PF00581 Rhodanese-like domain E2R47_12405 PF04317 YcjX-like family, DUF463 E2R47_12410 PF05128 Domain of unknown function (DUF697) E2R47_12415 PF18024 Helix-turn-helix domain E2R47_12415 PF00158 Sigma-54 interaction domain E2R47_12420 PF08534 Redoxin E2R47_12425 PF13378 Enolase C-terminal domain-like E2R47_12425 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain E2R47_12430 PF00246 Zinc carboxypeptidase E2R47_12435 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle E2R47_12445 PF03466 LysR substrate binding domain E2R47_12445 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2R47_12450 PF00248 Aldo/keto reductase family E2R47_12460 PF00440 Bacterial regulatory proteins, tetR family E2R47_12475 PF12833 Helix-turn-helix domain E2R47_12475 PF06445 GyrI-like small molecule binding domain E2R47_12495 PF08534 Redoxin E2R47_12515 PF00924 Mechanosensitive ion channel E2R47_12520 PF10749 Protein of unknown function (DUF2534) E2R47_12525 PF00582 Universal stress protein family E2R47_12530 PF00027 Cyclic nucleotide-binding domain E2R47_12530 PF13545 Crp-like helix-turn-helix domain E2R47_12535 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain E2R47_12535 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain E2R47_12540 PF01713 Smr domain E2R47_12550 PF02203 Tar ligand binding domain homologue E2R47_12550 PF00672 HAMP domain E2R47_12550 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E2R47_12555 PF01544 CorA-like Mg2+ transporter protein E2R47_12565 PF03880 DbpA RNA binding domain E2R47_12565 PF00270 DEAD/DEAH box helicase E2R47_12565 PF00271 Helicase conserved C-terminal domain E2R47_12570 PF01171 PP-loop family E2R47_12585 PF00893 Small Multidrug Resistance protein E2R47_12590 PF00582 Universal stress protein family E2R47_12595 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg E2R47_12595 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain E2R47_12595 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II E2R47_12595 PF10371 Domain of unknown function E2R47_12595 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase E2R47_12605 PF03891 Domain of unknown function (DUF333) E2R47_12610 PF03724 META domain E2R47_12615 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain E2R47_12615 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain E2R47_12620 PF11739 Dicarboxylate transport E2R47_12625 PF13617 YnbE-like lipoprotein E2R47_12630 PF07027 Protein of unknown function (DUF1318) E2R47_12640 PF02525 Flavodoxin-like fold E2R47_12645 PF04408 Helicase associated domain (HA2) E2R47_12645 PF00271 Helicase conserved C-terminal domain E2R47_12645 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold E2R47_12645 PF00270 DEAD/DEAH box helicase E2R47_12645 PF11898 Domain of unknown function (DUF3418) E2R47_12650 PF02698 DUF218 domain E2R47_12655 PF01292 Prokaryotic cytochrome b561 E2R47_12660 PF08242 Methyltransferase domain E2R47_12670 PF00528 Binding-protein-dependent transport system inner membrane component E2R47_12675 PF00005 ABC transporter E2R47_12680 PF00528 Binding-protein-dependent transport system inner membrane component E2R47_12685 PF00497 Bacterial extracellular solute-binding proteins, family 3 E2R47_12695 PF06767 Sif protein E2R47_12695 PF00657 GDSL-like Lipase/Acylhydrolase E2R47_12710 PF02583 Metal-sensitive transcriptional repressor E2R47_12715 PF00107 Zinc-binding dehydrogenase E2R47_12715 PF08240 Alcohol dehydrogenase GroES-like domain E2R47_12725 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E2R47_12725 PF02203 Tar ligand binding domain homologue E2R47_12725 PF00672 HAMP domain E2R47_12730 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2R47_12730 PF03466 LysR substrate binding domain E2R47_12735 PF07063 Domain of unknown function (DUF1338) E2R47_12740 PF00135 Carboxylesterase family E2R47_12745 PF04349 Periplasmic glucan biosynthesis protein, MdoG E2R47_12750 PF04264 YceI-like domain E2R47_12755 PF00392 Bacterial regulatory proteins, gntR family E2R47_12755 PF07729 FCD domain E2R47_12760 PF00107 Zinc-binding dehydrogenase E2R47_12760 PF08240 Alcohol dehydrogenase GroES-like domain E2R47_12765 PF07690 Major Facilitator Superfamily E2R47_12770 PF00106 short chain dehydrogenase E2R47_12775 PF13378 Enolase C-terminal domain-like E2R47_12775 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain E2R47_12780 PF00583 Acetyltransferase (GNAT) family E2R47_12785 PF00455 DeoR C terminal sensor domain E2R47_12785 PF08220 DeoR-like helix-turn-helix domain E2R47_12790 PF00834 Ribulose-phosphate 3 epimerase family E2R47_12795 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 E2R47_12800 PF03437 BtpA family E2R47_12805 PF03611 PTS system sugar-specific permease component E2R47_12810 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit E2R47_12815 PF05343 M42 glutamyl aminopeptidase E2R47_12820 PF13302 Acetyltransferase (GNAT) domain E2R47_12825 PF18836 Beta solenoid repeat from YDCK E2R47_12830 PF03595 Voltage-dependent anion channel E2R47_12835 PF03848 Tellurite resistance protein TehB E2R47_12840 PF11769 Protein of unknown function (DUF3313) E2R47_12845 PF03594 Benzoate membrane transport protein E2R47_12850 PF07883 Cupin domain E2R47_12850 PF01381 Helix-turn-helix E2R47_12855 PF12392 Collagenase E2R47_12855 PF01136 Peptidase family U32 E2R47_12860 PF10829 Protein of unknown function (DUF2554) E2R47_12865 PF06767 Sif protein E2R47_12880 PF01427 D-ala-D-ala dipeptidase E2R47_12885 PF00155 Aminotransferase class I and II E2R47_12885 PF00392 Bacterial regulatory proteins, gntR family E2R47_12890 PF00171 Aldehyde dehydrogenase family E2R47_12900 PF10753 Toxin GhoT_OrtT E2R47_12920 PF10735 Protein of unknown function (DUF2526) E2R47_12925 PF04657 Putative inner membrane exporter, YdcZ E2R47_12935 PF16884 N-terminal domain of oxidoreductase E2R47_12935 PF00107 Zinc-binding dehydrogenase E2R47_12940 PF07729 FCD domain E2R47_12940 PF00392 Bacterial regulatory proteins, gntR family E2R47_12945 PF07715 TonB-dependent Receptor Plug Domain E2R47_12945 PF00593 TonB dependent receptor E2R47_12955 PF06004 Bacterial protein of unknown function (DUF903) E2R47_12960 PF00324 Amino acid permease E2R47_12975 PF00797 N-acetyltransferase E2R47_12980 PF02567 Phenazine biosynthesis-like protein E2R47_12985 PF02665 Nitrate reductase gamma subunit E2R47_12990 PF02613 Nitrate reductase delta subunit E2R47_12995 PF14711 Respiratory nitrate reductase beta C-terminal E2R47_12995 PF13247 4Fe-4S dicluster domain E2R47_13000 PF00384 Molybdopterin oxidoreductase E2R47_13000 PF01568 Molydopterin dinucleotide binding domain E2R47_13000 PF14710 Respiratory nitrate reductase alpha N-terminal E2R47_13005 PF07690 Major Facilitator Superfamily E2R47_13010 PF00440 Bacterial regulatory proteins, tetR family E2R47_13015 PF07690 Major Facilitator Superfamily E2R47_13025 PF00267 Gram-negative porin E2R47_13035 PF00892 EamA-like transporter family E2R47_13040 PF00384 Molybdopterin oxidoreductase E2R47_13040 PF04879 Molybdopterin oxidoreductase Fe4S4 domain E2R47_13040 PF01568 Molydopterin dinucleotide binding domain E2R47_13045 PF01568 Molydopterin dinucleotide binding domain E2R47_13045 PF04879 Molybdopterin oxidoreductase Fe4S4 domain E2R47_13045 PF00384 Molybdopterin oxidoreductase E2R47_13050 PF13247 4Fe-4S dicluster domain E2R47_13050 PF09163 Formate dehydrogenase N, transmembrane E2R47_13050 PF12800 4Fe-4S binding domain E2R47_13055 PF01292 Prokaryotic cytochrome b561 E2R47_13060 PF08240 Alcohol dehydrogenase GroES-like domain E2R47_13060 PF00107 Zinc-binding dehydrogenase E2R47_13065 PF03949 Malic enzyme, NAD binding domain E2R47_13065 PF00390 Malic enzyme, N-terminal domain E2R47_13070 PF08136 30S ribosomal protein subunit S22 family E2R47_13075 PF10684 Putative biofilm-dependent modulation protein E2R47_13080 PF02566 OsmC-like protein E2R47_13085 PF06109 Haemolysin E (HlyE) E2R47_13100 PF06411 HdeA/HdeB family E2R47_13110 PF00128 Alpha amylase, catalytic domain E2R47_13110 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) E2R47_13110 PF11941 Domain of unknown function (DUF3459) E2R47_13115 PF00128 Alpha amylase, catalytic domain E2R47_13120 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) E2R47_13120 PF00128 Alpha amylase, catalytic domain E2R47_13125 PF00155 Aminotransferase class I and II E2R47_13130 PF03553 Na+/H+ antiporter family E2R47_13135 PF00356 Bacterial regulatory proteins, lacI family E2R47_13145 PF03060 Nitronate monooxygenase E2R47_13150 PF03466 LysR substrate binding domain E2R47_13150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2R47_13190 PF02547 Queuosine biosynthesis protein E2R47_13200 PF01494 FAD binding domain E2R47_13205 PF07690 Major Facilitator Superfamily E2R47_13215 PF07690 Major Facilitator Superfamily E2R47_13220 PF08240 Alcohol dehydrogenase GroES-like domain E2R47_13220 PF00107 Zinc-binding dehydrogenase E2R47_13225 PF07729 FCD domain E2R47_13225 PF00392 Bacterial regulatory proteins, gntR family E2R47_13235 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal E2R47_13235 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit E2R47_13240 PF00374 Nickel-dependent hydrogenase E2R47_13245 PF01292 Prokaryotic cytochrome b561 E2R47_13250 PF01750 Hydrogenase maturation protease E2R47_13255 PF01455 HupF/HypC family E2R47_13265 PF04809 HupH hydrogenase expression protein, C-terminal conserved region E2R47_13275 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA E2R47_13280 PF00267 Gram-negative porin E2R47_13290 PF01062 Bestrophin, RFP-TM, chloride channel E2R47_13295 PF13811 Domain of unknown function (DUF4186) E2R47_13300 PF04960 Glutaminase E2R47_13305 PF00171 Aldehyde dehydrogenase family E2R47_13310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2R47_13310 PF03466 LysR substrate binding domain E2R47_13315 PF07690 Major Facilitator Superfamily E2R47_13320 PF01914 MarC family integral membrane protein E2R47_13325 PF01047 MarR family E2R47_13330 PF12833 Helix-turn-helix domain E2R47_13335 PF13999 MarB protein E2R47_13340 PF00892 EamA-like transporter family E2R47_13345 PF07690 Major Facilitator Superfamily E2R47_13355 PF04076 Bacterial OB fold (BOF) protein E2R47_13360 PF02464 Competence-damaged protein E2R47_13365 PF10685 Stress-induced bacterial acidophilic repeat motif E2R47_13375 PF01432 Peptidase family M3 E2R47_13380 PF00106 short chain dehydrogenase E2R47_13385 PF00392 Bacterial regulatory proteins, gntR family E2R47_13385 PF07729 FCD domain E2R47_13390 PF14001 YdfZ protein E2R47_13395 PF08125 Mannitol dehydrogenase C-terminal domain E2R47_13395 PF01232 Mannitol dehydrogenase Rossmann domain E2R47_13400 PF07690 Major Facilitator Superfamily E2R47_13400 PF00083 Sugar (and other) transporter E2R47_13405 PF08240 Alcohol dehydrogenase GroES-like domain E2R47_13405 PF00107 Zinc-binding dehydrogenase E2R47_13410 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain E2R47_13410 PF13378 Enolase C-terminal domain-like E2R47_13415 PF02694 Uncharacterised BCR, YnfA/UPF0060 family E2R47_13420 PF06932 Protein of unknown function (DUF1283) E2R47_13425 PF13302 Acetyltransferase (GNAT) domain E2R47_13430 PF06788 Uncharacterised protein family (UPF0257) E2R47_13435 PF06649 Protein of unknown function (DUF1161) E2R47_13440 PF04879 Molybdopterin oxidoreductase Fe4S4 domain E2R47_13440 PF00384 Molybdopterin oxidoreductase E2R47_13440 PF01568 Molydopterin dinucleotide binding domain E2R47_13445 PF00384 Molybdopterin oxidoreductase E2R47_13445 PF04879 Molybdopterin oxidoreductase Fe4S4 domain E2R47_13445 PF01568 Molydopterin dinucleotide binding domain E2R47_13450 PF13247 4Fe-4S dicluster domain E2R47_13450 PF12800 4Fe-4S binding domain E2R47_13455 PF04976 DMSO reductase anchor subunit (DmsC) E2R47_13460 PF02613 Nitrate reductase delta subunit E2R47_13470 PF04879 Molybdopterin oxidoreductase Fe4S4 domain E2R47_13470 PF01568 Molydopterin dinucleotide binding domain E2R47_13470 PF00384 Molybdopterin oxidoreductase E2R47_13475 PF12800 4Fe-4S binding domain E2R47_13475 PF13247 4Fe-4S dicluster domain E2R47_13480 PF04976 DMSO reductase anchor subunit (DmsC) E2R47_13485 PF02613 Nitrate reductase delta subunit E2R47_13490 PF00528 Binding-protein-dependent transport system inner membrane component E2R47_13495 PF04069 Substrate binding domain of ABC-type glycine betaine transport system E2R47_13500 PF00528 Binding-protein-dependent transport system inner membrane component E2R47_13505 PF00571 CBS domain E2R47_13505 PF00005 ABC transporter E2R47_13510 PF00654 Voltage gated chloride channel E2R47_13520 PF00480 ROK family E2R47_13525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2R47_13525 PF03466 LysR substrate binding domain E2R47_13530 PF07690 Major Facilitator Superfamily E2R47_13540 PF00089 Trypsin E2R47_13545 PF00893 Small Multidrug Resistance protein E2R47_13550 PF00893 Small Multidrug Resistance protein E2R47_13560 PF01594 AI-2E family transporter E2R47_13565 PF02233 NAD(P) transhydrogenase beta subunit E2R47_13570 PF01262 Alanine dehydrogenase/PNT, C-terminal domain E2R47_13570 PF05222 Alanine dehydrogenase/PNT, N-terminal domain E2R47_13570 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch E2R47_13575 PF07338 Protein of unknown function (DUF1471) E2R47_13580 PF13520 Amino acid permease E2R47_13585 PF06942 GlpM protein E2R47_13590 PF00072 Response regulator receiver domain E2R47_13590 PF00486 Transcriptional regulatory protein, C terminal E2R47_13600 PF00267 Gram-negative porin E2R47_13605 PF13382 Adenine deaminase C-terminal domain E2R47_13605 PF01979 Amidohydrolase family E2R47_13610 PF00512 His Kinase A (phospho-acceptor) domain E2R47_13610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E2R47_13610 PF00672 HAMP domain E2R47_13615 PF05472 DNA replication terminus site-binding protein (Ter protein) E2R47_13620 PF00206 Lyase E2R47_13620 PF10415 Fumarase C C-terminus E2R47_13625 PF05683 Fumarase C-terminus E2R47_13625 PF05681 Fumarate hydratase (Fumerase) E2R47_13630 PF01238 Phosphomannose isomerase type I E2R47_13635 PF06097 Bacterial protein of unknown function (DUF945) E2R47_13640 PF00356 Bacterial regulatory proteins, lacI family E2R47_13640 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family E2R47_13645 PF00367 phosphotransferase system, EIIB E2R47_13645 PF02378 Phosphotransferase system, EIIC E2R47_13650 PF00155 Aminotransferase class I and II E2R47_13655 PF00962 Adenosine/AMP deaminase E2R47_13660 PF02894 Oxidoreductase family, C-terminal alpha/beta domain E2R47_13660 PF01408 Oxidoreductase family, NAD-binding Rossmann fold E2R47_13670 PF05321 Haemolysin expression modulating protein E2R47_13675 PF10754 Protein of unknown function (DUF2569) E2R47_13680 PF02508 Rnf-Nqr subunit, membrane protein E2R47_13685 PF04060 Putative Fe-S cluster E2R47_13690 PF10531 SLBB domain E2R47_13690 PF13375 RnfC Barrel sandwich hybrid domain E2R47_13690 PF12838 4Fe-4S dicluster domain E2R47_13690 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit E2R47_13695 PF03116 NQR2, RnfD, RnfE family E2R47_13700 PF04205 FMN-binding domain E2R47_13705 PF02508 Rnf-Nqr subunit, membrane protein E2R47_13710 PF00633 Helix-hairpin-helix motif E2R47_13710 PF00730 HhH-GPD superfamily base excision DNA repair protein E2R47_13710 PF10576 Iron-sulfur binding domain of endonuclease III E2R47_13715 PF00854 POT family E2R47_13720 PF00043 Glutathione S-transferase, C-terminal domain E2R47_13720 PF02798 Glutathione S-transferase, N-terminal domain E2R47_13725 PF08543 Phosphomethylpyrimidine kinase E2R47_13730 PF01479 S4 domain E2R47_13730 PF00579 tRNA synthetases class I (W and Y) E2R47_13735 PF01243 Pyridoxamine 5'-phosphate oxidase E2R47_13735 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region E2R47_13740 PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme E2R47_13745 PF03702 Anhydro-N-acetylmuramic acid kinase E2R47_13750 PF05433 Glycine zipper 2TM domain E2R47_13755 PF01047 MarR family E2R47_13760 PF07869 Protein of unknown function (DUF1656) E2R47_13765 PF00529 HlyD membrane-fusion protein of T1SS E2R47_13765 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion E2R47_13770 PF04632 Fusaric acid resistance protein family E2R47_13775 PF00080 Copper/zinc superoxide dismutase (SODC) E2R47_13780 PF00248 Aldo/keto reductase family E2R47_13785 PF06945 Protein of unknown function (DUF1289) E2R47_13790 PF16925 Tetracyclin repressor-like, C-terminal domain E2R47_13790 PF00440 Bacterial regulatory proteins, tetR family E2R47_13795 PF00724 NADH:flavin oxidoreductase / NADH oxidase family E2R47_13800 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily E2R47_13805 PF00929 Exonuclease E2R47_13815 PF00462 Glutaredoxin E2R47_13820 PF00877 NlpC/P60 family E2R47_13825 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain E2R47_13825 PF02777 Iron/manganese superoxide dismutases, C-terminal domain E2R47_13835 PF00356 Bacterial regulatory proteins, lacI family E2R47_13840 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2R47_13840 PF03466 LysR substrate binding domain E2R47_13845 PF07690 Major Facilitator Superfamily E2R47_13855 PF00677 Lumazine binding domain E2R47_13860 PF01554 MatE E2R47_13875 PF01312 FlhB HrpN YscU SpaS Family E2R47_13880 PF01311 Bacterial export proteins, family 1 E2R47_13885 PF01313 Bacterial export proteins, family 3 E2R47_13890 PF00813 FliP family E2R47_13895 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term E2R47_13910 PF18269 T3SS EscN ATPase C-terminal domain E2R47_13910 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain E2R47_13915 PF00771 FHIPEP family E2R47_13925 PF07201 HrpJ-like domain E2R47_13940 PF01514 Secretory protein of YscJ/FliF family E2R47_13980 PF05802 Enterobacterial EspB protein E2R47_13985 PF04888 Secretion system effector C (SseC) like family E2R47_13995 PF03433 EspA-like secreted protein E2R47_14025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E2R47_14025 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) E2R47_14025 PF00512 His Kinase A (phospho-acceptor) domain E2R47_14025 PF01627 Hpt domain E2R47_14025 PF00672 HAMP domain E2R47_14025 PF00072 Response regulator receiver domain E2R47_14030 PF00196 Bacterial regulatory proteins, luxR family E2R47_14030 PF00072 Response regulator receiver domain E2R47_14035 PF13411 MerR HTH family regulatory protein E2R47_14040 PF08349 Protein of unknown function (DUF1722) E2R47_14045 PF10965 Protein of unknown function (DUF2767) E2R47_14050 PF00196 Bacterial regulatory proteins, luxR family E2R47_14050 PF00072 Response regulator receiver domain E2R47_14055 PF00512 His Kinase A (phospho-acceptor) domain E2R47_14055 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E2R47_14060 PF13247 4Fe-4S dicluster domain E2R47_14065 PF03916 Polysulphide reductase, NrfD E2R47_14070 PF04879 Molybdopterin oxidoreductase Fe4S4 domain E2R47_14070 PF01568 Molydopterin dinucleotide binding domain E2R47_14070 PF00384 Molybdopterin oxidoreductase E2R47_14075 PF00294 pfkB family carbohydrate kinase E2R47_14085 PF00561 alpha/beta hydrolase fold E2R47_14090 PF00324 Amino acid permease E2R47_14095 PF00224 Pyruvate kinase, barrel domain E2R47_14095 PF02887 Pyruvate kinase, alpha/beta domain E2R47_14100 PF04728 Lipoprotein leucine-zipper E2R47_14105 PF04728 Lipoprotein leucine-zipper E2R47_14110 PF03734 L,D-transpeptidase catalytic domain E2R47_14110 PF01476 LysM domain E2R47_14110 PF17969 L,D-transpeptidase C-terminal domain E2R47_14115 PF02657 Fe-S metabolism associated domain E2R47_14120 PF00266 Aminotransferase class-V E2R47_14125 PF01458 Uncharacterized protein family (UPF0051) E2R47_14130 PF00005 ABC transporter E2R47_14135 PF01458 Uncharacterized protein family (UPF0051) E2R47_14140 PF01521 Iron-sulphur cluster biosynthesis E2R47_14150 PF15930 Domain of unknown function E2R47_14155 PF03061 Thioesterase superfamily E2R47_14160 PF13183 4Fe-4S dicluster domain E2R47_14160 PF01565 FAD binding domain E2R47_14160 PF02913 FAD linked oxidases, C-terminal domain E2R47_14165 PF01594 AI-2E family transporter E2R47_14175 PF08965 Domain of unknown function (DUF1870) E2R47_14180 PF07690 Major Facilitator Superfamily E2R47_14185 PF07690 Major Facilitator Superfamily E2R47_14190 PF08501 Shikimate dehydrogenase substrate binding domain E2R47_14190 PF18317 Shikimate 5'-dehydrogenase C-terminal domain E2R47_14195 PF01487 Type I 3-dehydroquinase E2R47_14200 PF01144 Coenzyme A transferase E2R47_14205 PF02771 Acyl-CoA dehydrogenase, N-terminal domain E2R47_14205 PF02770 Acyl-CoA dehydrogenase, middle domain E2R47_14205 PF00441 Acyl-CoA dehydrogenase, C-terminal domain E2R47_14210 PF12833 Helix-turn-helix domain E2R47_14210 PF02311 AraC-like ligand binding domain E2R47_14215 PF01012 Electron transfer flavoprotein domain E2R47_14220 PF01012 Electron transfer flavoprotein domain E2R47_14220 PF00766 Electron transfer flavoprotein FAD-binding domain E2R47_14225 PF01494 FAD binding domain E2R47_14235 PF00501 AMP-binding enzyme E2R47_14235 PF13193 AMP-binding enzyme C-terminal domain E2R47_14240 PF00391 PEP-utilising enzyme, mobile domain E2R47_14240 PF02896 PEP-utilising enzyme, TIM barrel domain E2R47_14240 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain E2R47_14245 PF03618 Kinase/pyrophosphorylase E2R47_14250 PF00793 DAHP synthetase I family E2R47_14270 PF10636 Hemin uptake protein hemP E2R47_14275 PF02696 Uncharacterized ACR, YdiU/UPF0061 family E2R47_14280 PF00563 EAL domain E2R47_14285 PF00877 NlpC/P60 family E2R47_14290 PF00005 ABC transporter E2R47_14295 PF00255 Glutathione peroxidase E2R47_14300 PF01032 FecCD transport family E2R47_14305 PF00216 Bacterial DNA-binding protein E2R47_14310 PF03483 B3/4 domain E2R47_14310 PF01588 Putative tRNA binding domain E2R47_14310 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain E2R47_14310 PF03484 tRNA synthetase B5 domain E2R47_14310 PF03147 Ferredoxin-fold anticodon binding domain E2R47_14315 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain E2R47_14315 PF01409 tRNA synthetases class II core domain (F) E2R47_14325 PF00453 Ribosomal protein L20 E2R47_14330 PF01632 Ribosomal protein L35 E2R47_14335 PF00707 Translation initiation factor IF-3, C-terminal domain E2R47_14335 PF05198 Translation initiation factor IF-3, N-terminal domain E2R47_14340 PF03129 Anticodon binding domain E2R47_14340 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain E2R47_14340 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) E2R47_14340 PF02824 TGS domain E2R47_14345 PF01223 DNA/RNA non-specific endonuclease E2R47_14360 PF04338 Protein of unknown function, DUF481 E2R47_14365 PF00294 pfkB family carbohydrate kinase E2R47_14370 PF11080 Endoribonuclease GhoS E2R47_14380 PF14002 YniB-like protein E2R47_14385 PF13419 Haloacid dehalogenase-like hydrolase E2R47_14390 PF04307 LexA-binding, inner membrane-associated putative hydrolase E2R47_14400 PF10729 Cell division activator CedA E2R47_14405 PF06628 Catalase-related immune-responsive E2R47_14405 PF18011 C-terminal domain found in long catalases E2R47_14405 PF00199 Catalase E2R47_14410 PF04794 YdjC-like protein E2R47_14415 PF02056 Family 4 glycosyl hydrolase E2R47_14415 PF11975 Family 4 glycosyl hydrolase C-terminal domain E2R47_14420 PF12833 Helix-turn-helix domain E2R47_14420 PF07883 Cupin domain E2R47_14425 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit E2R47_14430 PF02378 Phosphotransferase system, EIIC E2R47_14435 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit E2R47_14445 PF04355 SmpA / OmlA family E2R47_14450 PF02540 NAD synthase E2R47_14460 PF07813 LTXXQ motif family protein E2R47_14470 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family E2R47_14475 PF04996 Succinylarginine dihydrolase E2R47_14480 PF00171 Aldehyde dehydrogenase family E2R47_14485 PF04958 Arginine N-succinyltransferase beta subunit E2R47_14490 PF00202 Aminotransferase class-III E2R47_14495 PF03372 Endonuclease/Exonuclease/phosphatase family E2R47_14500 PF00293 NUDIX domain E2R47_14505 PF07383 Protein of unknown function (DUF1496) E2R47_14510 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain E2R47_14510 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase E2R47_14515 PF01751 Toprim domain E2R47_14515 PF01131 DNA topoisomerase E2R47_14520 PF02769 AIR synthase related protein, C-terminal domain E2R47_14520 PF00586 AIR synthase related protein, N-terminal domain E2R47_14525 PF00881 Nitroreductase family E2R47_14530 PF01343 Peptidase family S49 E2R47_14535 PF17763 Glutaminase/Asparaginase C-terminal domain E2R47_14535 PF00710 Asparaginase, N-terminal E2R47_14540 PF00857 Isochorismatase family E2R47_14545 PF07023 Protein of unknown function (DUF1315) E2R47_14550 PF01641 SelR domain E2R47_14555 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain E2R47_14555 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain E2R47_14565 PF01263 Aldose 1-epimerase E2R47_14570 PF00248 Aldo/keto reductase family E2R47_14575 PF04055 Radical SAM superfamily E2R47_14575 PF13186 Iron-sulfur cluster-binding domain E2R47_14580 PF06629 MltA-interacting protein MipA E2R47_14585 PF06798 PrkA serine protein kinase C-terminal domain E2R47_14585 PF08298 PrkA AAA domain E2R47_14590 PF04285 Protein of unknown function (DUF444) E2R47_14600 PF17155 Gammaproteobacterial periplasmic sensor domain E2R47_14600 PF00990 Diguanylate cyclase, GGDEF domain E2R47_14605 PF04073 Aminoacyl-tRNA editing domain E2R47_14615 PF04284 Protein of unknown function (DUF441) E2R47_14620 PF12833 Helix-turn-helix domain E2R47_14620 PF02311 AraC-like ligand binding domain E2R47_14625 PF07690 Major Facilitator Superfamily E2R47_14630 PF04343 Protein of unknown function, DUF488 E2R47_14640 PF03891 Domain of unknown function (DUF333) E2R47_14650 PF04226 Transglycosylase associated protein E2R47_14665 PF08956 Domain of unknown function (DUF1869) E2R47_14670 PF09313 Domain of unknown function (DUF1971) E2R47_14680 PF01810 LysE type translocator E2R47_14685 PF01817 Chorismate mutase type II E2R47_14695 PF00376 MerR family regulatory protein E2R47_14695 PF09278 MerR, DNA binding E2R47_14705 PF01909 Nucleotidyltransferase domain E2R47_14705 PF13427 Domain of unknown function (DUF4111) E2R47_14710 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment E2R47_14725 PF00924 Mechanosensitive ion channel E2R47_14730 PF00005 ABC transporter E2R47_14735 PF00005 ABC transporter E2R47_14740 PF00528 Binding-protein-dependent transport system inner membrane component E2R47_14740 PF12911 N-terminal TM domain of oligopeptide transport permease C E2R47_14745 PF00528 Binding-protein-dependent transport system inner membrane component E2R47_14750 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle E2R47_14760 PF01292 Prokaryotic cytochrome b561 E2R47_14770 PF00011 Hsp20/alpha crystallin family E2R47_14800 PF06316 Enterobacterial Ail/Lom protein E2R47_14820 PF00313 'Cold-shock' DNA-binding domain E2R47_14825 PF00652 Ricin-type beta-trefoil lectin domain E2R47_14830 PF06183 DinI-like family E2R47_14835 PF03372 Endonuclease/Exonuclease/phosphatase family E2R47_14870 PF00180 Isocitrate/isopropylmalate dehydrogenase E2R47_14875 PF00849 RNA pseudouridylate synthase E2R47_14885 PF00293 NUDIX domain E2R47_14895 PF04356 Protein of unknown function (DUF489) E2R47_14900 PF00206 Lyase E2R47_14900 PF08328 Adenylosuccinate lyase C-terminal E2R47_14905 PF00072 Response regulator receiver domain E2R47_14905 PF00486 Transcriptional regulatory protein, C terminal E2R47_14910 PF08918 PhoQ Sensor E2R47_14910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E2R47_14915 PF08007 Cupin superfamily protein E2R47_14925 PF01546 Peptidase family M20/M25/M40 E2R47_14925 PF07687 Peptidase dimerisation domain E2R47_14930 PF08402 TOBE domain E2R47_14930 PF00005 ABC transporter E2R47_14935 PF00528 Binding-protein-dependent transport system inner membrane component E2R47_14940 PF06767 Sif protein E2R47_14945 PF00528 Binding-protein-dependent transport system inner membrane component E2R47_14950 PF13416 Bacterial extracellular solute-binding protein E2R47_14955 PF02146 Sir2 family E2R47_14960 PF00480 ROK family E2R47_14965 PF12704 MacB-like periplasmic core domain E2R47_14965 PF02687 FtsX-like permease family E2R47_14970 PF00005 ABC transporter E2R47_14975 PF12704 MacB-like periplasmic core domain E2R47_14975 PF02687 FtsX-like permease family E2R47_14980 PF02559 CarD-like/TRCF domain E2R47_14980 PF17757 UvrB interaction domain E2R47_14980 PF03461 TRCF domain E2R47_14980 PF00270 DEAD/DEAH box helicase E2R47_14980 PF00271 Helicase conserved C-terminal domain E2R47_14985 PF03734 L,D-transpeptidase catalytic domain E2R47_14985 PF17969 L,D-transpeptidase C-terminal domain E2R47_14985 PF01476 LysM domain E2R47_14990 PF07338 Protein of unknown function (DUF1471) E2R47_14995 PF00440 Bacterial regulatory proteins, tetR family E2R47_15000 PF05433 Glycine zipper 2TM domain E2R47_15005 PF07992 Pyridine nucleotide-disulphide oxidoreductase E2R47_15010 PF05728 Uncharacterised protein family (UPF0227) E2R47_15015 PF00933 Glycosyl hydrolase family 3 N terminal domain E2R47_15020 PF01636 Phosphotransferase enzyme family E2R47_15025 PF13036 Peptidoglycan-synthase activator LpoB E2R47_15030 PF07233 Protein of unknown function (DUF1425) E2R47_15035 PF01230 HIT domain E2R47_15040 PF00593 TonB dependent receptor E2R47_15040 PF07715 TonB-dependent Receptor Plug Domain E2R47_15045 PF02378 Phosphotransferase system, EIIC E2R47_15045 PF00367 phosphotransferase system, EIIB E2R47_15050 PF01026 TatD related DNase E2R47_15055 PF09115 DNA polymerase III, delta subunit, C terminal E2R47_15060 PF02223 Thymidylate kinase E2R47_15065 PF02618 YceG-like family E2R47_15070 PF01063 Amino-transferase class IV E2R47_15075 PF02801 Beta-ketoacyl synthase, C-terminal domain E2R47_15075 PF00109 Beta-ketoacyl synthase, N-terminal domain E2R47_15080 PF00550 Phosphopantetheine attachment site E2R47_15090 PF00698 Acyl transferase domain E2R47_15095 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal E2R47_15095 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III E2R47_15100 PF02504 Fatty acid synthesis protein E2R47_15105 PF01783 Ribosomal L32p protein family E2R47_15110 PF02620 Large ribosomal RNA subunit accumulation protein YceD E2R47_15115 PF02545 Maf-like protein E2R47_15130 PF00849 RNA pseudouridylate synthase E2R47_15130 PF01479 S4 domain E2R47_15140 PF00575 S1 RNA binding domain E2R47_15140 PF10150 Ribonuclease E/G family E2R47_15140 PF12111 Polyribonucleotide phosphorylase C terminal E2R47_15150 PF01797 Transposase IS200 like E2R47_15165 PF00669 Bacterial flagellin N-terminal helical region E2R47_15170 PF06429 Flagellar basal body rod FlgEFG protein C-terminal E2R47_15170 PF00460 Flagella basal body rod protein E2R47_15175 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase E2R47_15175 PF10135 Rod binding protein E2R47_15180 PF02119 Flagellar P-ring protein E2R47_15185 PF02107 Flagellar L-ring protein E2R47_15190 PF00460 Flagella basal body rod protein E2R47_15190 PF06429 Flagellar basal body rod FlgEFG protein C-terminal E2R47_15195 PF00460 Flagella basal body rod protein E2R47_15195 PF06429 Flagellar basal body rod FlgEFG protein C-terminal E2R47_15200 PF07559 Flagellar basal body protein FlaE E2R47_15200 PF00460 Flagella basal body rod protein E2R47_15200 PF06429 Flagellar basal body rod FlgEFG protein C-terminal E2R47_15205 PF13860 FlgD Ig-like domain E2R47_15205 PF03963 Flagellar hook capping protein - N-terminal region E2R47_15205 PF13861 FlgD Tudor-like domain E2R47_15210 PF00460 Flagella basal body rod protein E2R47_15210 PF06429 Flagellar basal body rod FlgEFG protein C-terminal E2R47_15215 PF00460 Flagella basal body rod protein E2R47_15225 PF13144 Chaperone for flagella basal body P-ring formation E2R47_15230 PF04316 Anti-sigma-28 factor, FlgM E2R47_15235 PF05130 FlgN protein E2R47_15240 PF03023 Lipid II flippase MurJ E2R47_15245 PF01408 Oxidoreductase family, NAD-binding Rossmann fold E2R47_15250 PF04337 Protein of unknown function, DUF480 E2R47_15255 PF13302 Acetyltransferase (GNAT) domain E2R47_15260 PF07690 Major Facilitator Superfamily E2R47_15265 PF13417 Glutathione S-transferase, N-terminal domain E2R47_15265 PF04399 Glutaredoxin 2, C terminal domain E2R47_15270 PF07273 Protein of unknown function (DUF1439) E2R47_15275 PF01979 Amidohydrolase family E2R47_15280 PF06183 DinI-like family E2R47_15285 PF13991 BssS protein family E2R47_15290 PF01266 FAD dependent oxidoreductase E2R47_15295 PF10968 Protein of unknown function (DUF2770) E2R47_15300 PF01292 Prokaryotic cytochrome b561 E2R47_15305 PF04264 YceI-like domain E2R47_15315 PF03279 Bacterial lipid A biosynthesis acyltransferase E2R47_15325 PF07690 Major Facilitator Superfamily E2R47_15330 PF13984 MsyB protein E2R47_15335 PF07119 Protein of unknown function (DUF1375) E2R47_15340 PF00535 Glycosyl transferase family 2 E2R47_15345 PF04349 Periplasmic glucan biosynthesis protein, MdoG E2R47_15355 PF01757 Acyltransferase family E2R47_15360 PF13091 PLD-like domain E2R47_15365 PF01661 Macro domain E2R47_15375 PF10610 Thin aggregative fimbriae synthesis protein E2R47_15380 PF07012 Curlin associated repeat E2R47_15385 PF07012 Curlin associated repeat E2R47_15390 PF00196 Bacterial regulatory proteins, luxR family E2R47_15395 PF10627 Curli assembly protein CsgE E2R47_15400 PF10614 Type VIII secretion system (T8SS), CsgF protein E2R47_15405 PF03783 Curli production assembly/transport component CsgG E2R47_15410 PF06496 Protein of unknown function (DUF1097) E2R47_15415 PF02613 Nitrate reductase delta subunit E2R47_15420 PF02811 PHP domain E2R47_15425 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain E2R47_15445 PF01408 Oxidoreductase family, NAD-binding Rossmann fold E2R47_15445 PF02894 Oxidoreductase family, C-terminal alpha/beta domain E2R47_15450 PF07690 Major Facilitator Superfamily E2R47_15455 PF06178 Oligogalacturonate-specific porin protein (KdgM) E2R47_15460 PF01344 Kelch motif E2R47_15465 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase E2R47_15470 PF00474 Sodium:solute symporter family E2R47_15475 PF01418 Helix-turn-helix domain, rpiR family E2R47_15475 PF01380 SIS domain E2R47_15480 PF02562 PhoH-like protein E2R47_15490 PF00474 Sodium:solute symporter family E2R47_15495 PF00171 Aldehyde dehydrogenase family E2R47_15495 PF18327 Proline utilization A proline dehydrogenase N-terminal domain E2R47_15495 PF01619 Proline dehydrogenase E2R47_15495 PF14850 DNA-binding domain of Proline dehydrogenase E2R47_15505 PF08362 YcdC-like protein, C-terminal region E2R47_15505 PF00440 Bacterial regulatory proteins, tetR family E2R47_15510 PF10685 Stress-induced bacterial acidophilic repeat motif E2R47_15515 PF03358 NADPH-dependent FMN reductase E2R47_15520 PF13993 YccJ-like protein E2R47_15525 PF00328 Histidine phosphatase superfamily (branch 2) E2R47_15530 PF00578 AhpC/TSA family E2R47_15535 PF13462 Thioredoxin E2R47_15535 PF06965 Na+/H+ antiporter 1 E2R47_15540 PF11412 Disulphide bond corrector protein DsbC E2R47_15540 PF13098 Thioredoxin-like domain E2R47_15540 PF02683 Cytochrome C biogenesis protein transmembrane region E2R47_15555 PF00226 DnaJ domain E2R47_15555 PF01556 DnaJ C terminal domain E2R47_15575 PF12706 Beta-lactamase superfamily domain E2R47_15585 PF07690 Major Facilitator Superfamily E2R47_15590 PF03328 HpcH/HpaI aldolase/citrate lyase family E2R47_15595 PF01557 Fumarylacetoacetate (FAA) hydrolase family E2R47_15600 PF02962 5-carboxymethyl-2-hydroxymuconate isomerase E2R47_15605 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase E2R47_15610 PF00171 Aldehyde dehydrogenase family E2R47_15615 PF01557 Fumarylacetoacetate (FAA) hydrolase family E2R47_15620 PF01047 MarR family E2R47_15625 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal E2R47_15625 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal E2R47_15630 PF01613 Flavin reductase like domain E2R47_15640 PF00576 HIUase/Transthyretin family E2R47_15645 PF00072 Response regulator receiver domain E2R47_15645 PF00486 Transcriptional regulatory protein, C terminal E2R47_15650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E2R47_15650 PF00512 His Kinase A (phospho-acceptor) domain E2R47_15655 PF03577 Peptidase family C69 E2R47_15665 PF13132 Domain of unknown function (DUF3950) E2R47_15670 PF05925 Enterobacterial virulence protein IpgD E2R47_15675 PF07824 Type III secretion chaperone domain E2R47_15685 PF00805 Pentapeptide repeats (8 copies) E2R47_15700 PF01027 Inhibitor of apoptosis-promoting Bax1 E2R47_15705 PF04358 DsrC like protein E2R47_15710 PF00708 Acylphosphatase E2R47_15715 PF12833 Helix-turn-helix domain E2R47_15720 PF01161 Phosphatidylethanolamine-binding protein E2R47_15725 PF10672 S-adenosylmethionine-dependent methyltransferase E2R47_15725 PF17785 PUA-like domain E2R47_15730 PF08755 Hemimethylated DNA-binding protein YccV like E2R47_15735 PF13380 CoA binding domain E2R47_15740 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) E2R47_15745 PF02142 MGS-like domain E2R47_15750 PF13361 UvrD-like helicase C-terminal domain E2R47_15750 PF12462 DNA helicase IV / RNA helicase N terminal E2R47_15750 PF00580 UvrD/REP helicase N-terminal domain E2R47_15755 PF03733 Inner membrane component domain E2R47_15760 PF12805 FUSC-like inner membrane protein yccS E2R47_15765 PF04993 TfoX N-terminal domain E2R47_15765 PF04994 TfoX C-terminal domain E2R47_15770 PF03846 Cell division inhibitor SulA E2R47_15775 PF00691 OmpA family E2R47_15775 PF01389 OmpA-like transmembrane domain E2R47_15780 PF06303 MatP N-terminal domain E2R47_15780 PF17414 MatP C-terminal ribbon-helix-helix domain E2R47_15785 PF13654 AAA domain E2R47_15785 PF05362 Lon protease (S16) C-terminal proteolytic domain E2R47_15790 PF07977 FabA-like domain E2R47_15795 PF04957 Ribosome modulation factor E2R47_15800 PF03886 ABC-type transport auxiliary lipoprotein component E2R47_15805 PF02470 MlaD protein E2R47_15810 PF04403 Paraquat-inducible protein A E2R47_15815 PF00005 ABC transporter E2R47_15815 PF16326 ABC transporter C-terminal domain E2R47_15815 PF12848 ABC transporter E2R47_15820 PF01170 Putative RNA methylase family UPF0020 E2R47_15820 PF10672 S-adenosylmethionine-dependent methyltransferase E2R47_15820 PF02926 THUMP domain E2R47_15825 PF03473 MOSC domain E2R47_15825 PF03476 MOSC N-terminal beta barrel domain E2R47_15825 PF00111 2Fe-2S iron-sulfur cluster binding domain E2R47_15830 PF07126 Cell-division protein ZapC E2R47_15835 PF01180 Dihydroorotate dehydrogenase E2R47_15840 PF17432 Domain of unknown function (DUF3458_C) ARM repeats E2R47_15840 PF11940 Domain of unknown function (DUF3458) Ig-like fold E2R47_15840 PF01433 Peptidase family M1 domain E2R47_15845 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain E2R47_15845 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family E2R47_15850 PF01235 Sodium:alanine symporter family E2R47_15855 PF00291 Pyridoxal-phosphate dependent enzyme E2R47_15865 PF13404 AsnC-type helix-turn-helix domain E2R47_15865 PF01037 Lrp/AsnC ligand binding domain E2R47_15870 PF00152 tRNA synthetases class II (D, K and N) E2R47_15870 PF01336 OB-fold nucleic acid binding domain E2R47_15875 PF00267 Gram-negative porin E2R47_15880 PF00155 Aminotransferase class I and II E2R47_15885 PF00753 Metallo-beta-lactamase superfamily E2R47_15890 PF05951 Bacterial protein of unknown function (DUF882) E2R47_15895 PF03734 L,D-transpeptidase catalytic domain E2R47_15895 PF01471 Putative peptidoglycan binding domain E2R47_15905 PF04310 MukB N-terminal E2R47_15905 PF16330 MukB hinge domain E2R47_15910 PF04288 MukE-like family E2R47_15915 PF17193 MukF C-terminal domain E2R47_15915 PF17192 MukF middle domain E2R47_15915 PF03882 MukF winged-helix domain E2R47_15920 PF13847 Methyltransferase domain E2R47_15925 PF02698 DUF218 domain E2R47_15930 PF01636 Phosphotransferase enzyme family E2R47_15935 PF02348 Cytidylyltransferase E2R47_15940 PF03966 Trm112p-like protein E2R47_15945 PF06224 Winged helix DNA-binding domain E2R47_15950 PF02606 Tetraacyldisaccharide-1-P 4'-kinase E2R47_15955 PF00005 ABC transporter E2R47_15955 PF00664 ABC transporter transmembrane region E2R47_15960 PF03772 Competence protein E2R47_15960 PF00753 Metallo-beta-lactamase superfamily E2R47_15965 PF00216 Bacterial DNA-binding protein E2R47_15970 PF00575 S1 RNA binding domain E2R47_15975 PF02224 Cytidylate kinase E2R47_15980 PF01435 Peptidase family M48 E2R47_15985 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) E2R47_15990 PF00266 Aminotransferase class-V E2R47_15995 PF04239 Protein of unknown function (DUF421) E2R47_16000 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding E2R47_16000 PF18381 YcaO cyclodehydratase C-terminal domain E2R47_16005 PF01226 Formate/nitrite transporter E2R47_16010 PF01228 Glycine radical E2R47_16010 PF02901 Pyruvate formate lyase-like E2R47_16015 PF11047 Salmonella outer protein D E2R47_16025 PF04055 Radical SAM superfamily E2R47_16030 PF13520 Amino acid permease E2R47_16035 PF07690 Major Facilitator Superfamily E2R47_16040 PF04976 DMSO reductase anchor subunit (DmsC) E2R47_16045 PF12800 4Fe-4S binding domain E2R47_16045 PF13247 4Fe-4S dicluster domain E2R47_16050 PF01568 Molydopterin dinucleotide binding domain E2R47_16050 PF04879 Molybdopterin oxidoreductase Fe4S4 domain E2R47_16050 PF00384 Molybdopterin oxidoreductase E2R47_16055 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) E2R47_16055 PF02403 Seryl-tRNA synthetase N-terminal domain E2R47_16060 PF16193 AAA C-terminal domain E2R47_16060 PF00004 ATPase family associated with various cellular activities (AAA) E2R47_16060 PF12002 MgsA AAA+ ATPase C terminal E2R47_16065 PF03548 Outer membrane lipoprotein carrier protein LolA E2R47_16070 PF01580 FtsK/SpoIIIE family E2R47_16070 PF09397 Ftsk gamma domain E2R47_16070 PF17854 FtsK alpha domain E2R47_16070 PF13491 4TM region of DNA translocase FtsK/SpoIIIE E2R47_16075 PF01037 Lrp/AsnC ligand binding domain E2R47_16080 PF07992 Pyridine nucleotide-disulphide oxidoreductase E2R47_16085 PF00664 ABC transporter transmembrane region E2R47_16085 PF00005 ABC transporter E2R47_16090 PF00005 ABC transporter E2R47_16090 PF00664 ABC transporter transmembrane region E2R47_16095 PF03588 Leucyl/phenylalanyl-tRNA protein transferase E2R47_16105 PF01176 Translation initiation factor 1A / IF-1 E2R47_16110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2R47_16110 PF03466 LysR substrate binding domain E2R47_16115 PF02678 Pirin E2R47_16115 PF05726 Pirin C-terminal cupin domain E2R47_16120 PF00857 Isochorismatase family E2R47_16165 PF10431 C-terminal, D2-small domain, of ClpB protein E2R47_16165 PF07724 AAA domain (Cdc48 subfamily) E2R47_16165 PF17871 AAA lid domain E2R47_16165 PF02861 Clp amino terminal domain, pathogenicity island component E2R47_16165 PF00004 ATPase family associated with various cellular activities (AAA) E2R47_16170 PF02617 ATP-dependent Clp protease adaptor protein ClpS E2R47_16175 PF00313 'Cold-shock' DNA-binding domain E2R47_16180 PF12704 MacB-like periplasmic core domain E2R47_16180 PF02687 FtsX-like permease family E2R47_16180 PF00005 ABC transporter E2R47_16185 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion E2R47_16190 PF04393 Protein of unknown function (DUF535) E2R47_16195 PF11398 Protein of unknown function (DUF2813) E2R47_16200 PF03956 Lysine exporter LysO E2R47_16205 PF03063 Prismane/CO dehydrogenase family E2R47_16210 PF00111 2Fe-2S iron-sulfur cluster binding domain E2R47_16210 PF00175 Oxidoreductase NAD-binding domain E2R47_16210 PF00970 Oxidoreductase FAD-binding domain E2R47_16215 PF00205 Thiamine pyrophosphate enzyme, central domain E2R47_16215 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain E2R47_16215 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain E2R47_16220 PF01212 Beta-eliminating lyase E2R47_16225 PF13460 NAD(P)H-binding E2R47_16225 PF11066 Protein of unknown function (DUF2867) E2R47_16230 PF01370 NAD dependent epimerase/dehydratase family E2R47_16235 PF01510 N-acetylmuramoyl-L-alanine amidase E2R47_16240 PF01906 Putative heavy-metal-binding E2R47_16245 PF12883 Protein of unknown function (DUF3828) E2R47_16250 PF00005 ABC transporter E2R47_16255 PF00497 Bacterial extracellular solute-binding proteins, family 3 E2R47_16260 PF00528 Binding-protein-dependent transport system inner membrane component E2R47_16265 PF00528 Binding-protein-dependent transport system inner membrane component E2R47_16270 PF00497 Bacterial extracellular solute-binding proteins, family 3 E2R47_16285 PF03611 PTS system sugar-specific permease component E2R47_16290 PF05958 tRNA (Uracil-5-)-methyltransferase E2R47_16295 PF10767 Protein of unknown function (DUF2593) E2R47_16300 PF00528 Binding-protein-dependent transport system inner membrane component E2R47_16305 PF00528 Binding-protein-dependent transport system inner membrane component E2R47_16310 PF08402 TOBE domain E2R47_16310 PF00005 ABC transporter E2R47_16315 PF13416 Bacterial extracellular solute-binding protein E2R47_16320 PF10722 Putative bacterial sensory transduction regulator E2R47_16325 PF18030 RimK PreATP-grasp domain E2R47_16325 PF08443 RimK-like ATP-grasp domain E2R47_16330 PF00881 Nitroreductase family E2R47_16335 PF07214 Protein of unknown function (DUF1418) E2R47_16340 PF00462 Glutaredoxin E2R47_16345 PF11045 Putative inner membrane protein of Enterobacteriaceae E2R47_16350 PF06826 Predicted Permease Membrane Region E2R47_16350 PF02080 TrkA-C domain E2R47_16360 PF00440 Bacterial regulatory proteins, tetR family E2R47_16365 PF07690 Major Facilitator Superfamily E2R47_16375 PF07690 Major Facilitator Superfamily E2R47_16380 PF01569 PAP2 superfamily E2R47_16385 PF00455 DeoR C terminal sensor domain E2R47_16385 PF08220 DeoR-like helix-turn-helix domain E2R47_16390 PF00768 D-alanyl-D-alanine carboxypeptidase E2R47_16390 PF07943 Penicillin-binding protein 5, C-terminal domain E2R47_16395 PF00043 Glutathione S-transferase, C-terminal domain E2R47_16395 PF13417 Glutathione S-transferase, N-terminal domain E2R47_16400 PF07995 Glucose / Sorbosone dehydrogenase E2R47_16405 PF10799 Biofilm formation protein (YliH/bssR) E2R47_16410 PF00919 Uncharacterized protein family UPF0004 E2R47_16410 PF18693 TRAM domain E2R47_16410 PF04055 Radical SAM superfamily E2R47_16415 PF00528 Binding-protein-dependent transport system inner membrane component E2R47_16415 PF12911 N-terminal TM domain of oligopeptide transport permease C E2R47_16420 PF00528 Binding-protein-dependent transport system inner membrane component E2R47_16425 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle E2R47_16430 PF08352 Oligopeptide/dipeptide transporter, C-terminal region E2R47_16430 PF00005 ABC transporter E2R47_16435 PF01112 Asparaginase E2R47_16440 PF03453 MoeA N-terminal region (domain I and II) E2R47_16440 PF03454 MoeA C-terminal region (domain IV) E2R47_16440 PF00994 Probable molybdopterin binding domain E2R47_16445 PF00899 ThiF family E2R47_16450 PF04055 Radical SAM superfamily E2R47_16465 PF07350 Protein of unknown function (DUF1479) E2R47_16470 PF12848 ABC transporter E2R47_16470 PF00005 ABC transporter E2R47_16475 PF17969 L,D-transpeptidase C-terminal domain E2R47_16475 PF03734 L,D-transpeptidase catalytic domain E2R47_16480 PF03600 Citrate transporter E2R47_16485 PF01325 Iron dependent repressor, N-terminal DNA binding domain E2R47_16485 PF02742 Iron dependent repressor, metal binding and dimerisation domain E2R47_16495 PF00884 Sulfatase E2R47_16500 PF13505 Outer membrane protein beta-barrel domain E2R47_16505 PF00892 EamA-like transporter family E2R47_16510 PF00210 Ferritin-like domain E2R47_16515 PF00497 Bacterial extracellular solute-binding proteins, family 3 E2R47_16520 PF00528 Binding-protein-dependent transport system inner membrane component E2R47_16525 PF00005 ABC transporter E2R47_16530 PF00924 Mechanosensitive ion channel E2R47_16535 PF05971 RNA methyltransferase E2R47_16540 PF01258 Prokaryotic dksA/traR C4-type zinc finger E2R47_16545 PF07338 Protein of unknown function (DUF1471) E2R47_16550 PF02885 Glycosyl transferase family, helical bundle domain E2R47_16555 PF13307 Helicase C-terminal domain E2R47_16555 PF06733 DEAD_2 E2R47_16560 PF00270 DEAD/DEAH box helicase E2R47_16560 PF00271 Helicase conserved C-terminal domain E2R47_16565 PF00440 Bacterial regulatory proteins, tetR family E2R47_16565 PF09209 Tetracyclin repressor-like, C-terminal domain E2R47_16570 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion E2R47_16575 PF00005 ABC transporter E2R47_16590 PF11076 Putative inner membrane protein YbhQ E2R47_16595 PF03372 Endonuclease/Exonuclease/phosphatase family E2R47_16600 PF13091 PLD-like domain E2R47_16605 PF03706 Lysylphosphatidylglycerol synthase TM region E2R47_16625 PF01027 Inhibitor of apoptosis-promoting Bax1 E2R47_16630 PF02391 MoaE protein E2R47_16635 PF02597 ThiS family E2R47_16640 PF01967 MoaC family E2R47_16645 PF00994 Probable molybdopterin binding domain E2R47_16650 PF06463 Molybdenum Cofactor Synthesis C E2R47_16650 PF04055 Radical SAM superfamily E2R47_16655 PF01933 Uncharacterised protein family UPF0052 E2R47_16660 PF12468 Type III secretion system leucine rich repeat protein E2R47_16660 PF14496 C-terminal novel E3 ligase, LRR-interacting E2R47_16670 PF04851 Type III restriction enzyme, res subunit E2R47_16670 PF17757 UvrB interaction domain E2R47_16670 PF00271 Helicase conserved C-terminal domain E2R47_16670 PF02151 UvrB/uvrC motif E2R47_16670 PF12344 Ultra-violet resistance protein B E2R47_16685 PF08241 Methyltransferase domain E2R47_16690 PF00155 Aminotransferase class I and II E2R47_16695 PF04055 Radical SAM superfamily E2R47_16695 PF06968 Biotin and Thiamin Synthesis associated domain E2R47_16700 PF00202 Aminotransferase class-III E2R47_16705 PF01161 Phosphatidylethanolamine-binding protein E2R47_16710 PF00221 Aromatic amino acid lyase E2R47_16715 PF17392 Urocanase C-terminal domain E2R47_16715 PF17391 Urocanase N-terminal domain E2R47_16715 PF01175 Urocanase Rossmann-like domain E2R47_16720 PF00392 Bacterial regulatory proteins, gntR family E2R47_16720 PF07702 UTRA domain E2R47_16725 PF00491 Arginase family E2R47_16730 PF01979 Amidohydrolase family E2R47_16735 PF01095 Pectinesterase E2R47_16740 PF10282 Lactonase, 7-bladed beta-propeller E2R47_16750 PF03459 TOBE domain E2R47_16750 PF00005 ABC transporter E2R47_16755 PF00528 Binding-protein-dependent transport system inner membrane component E2R47_16765 PF10766 Multidrug efflux pump-associated protein AcrZ E2R47_16770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2R47_16770 PF03459 TOBE domain E2R47_16775 PF00005 ABC transporter E2R47_16785 PF16363 GDP-mannose 4,6 dehydratase E2R47_16790 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain E2R47_16790 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain E2R47_16795 PF00288 GHMP kinases N terminal domain E2R47_16795 PF10509 Galactokinase galactose-binding signature E2R47_16795 PF08544 GHMP kinases C terminal E2R47_16800 PF01263 Aldose 1-epimerase E2R47_16805 PF00300 Histidine phosphatase superfamily (branch 1) E2R47_16810 PF00005 ABC transporter E2R47_16815 PF01032 FecCD transport family E2R47_16820 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase E2R47_16825 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit E2R47_16830 PF00364 Biotin-requiring enzyme E2R47_16830 PF00682 HMGL-like E2R47_16830 PF02436 Conserved carboxylase domain E2R47_16835 PF04277 Oxaloacetate decarboxylase, gamma chain E2R47_16840 PF03600 Citrate transporter E2R47_16840 PF02080 TrkA-C domain E2R47_16845 PF03466 LysR substrate binding domain E2R47_16845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2R47_16850 PF03466 LysR substrate binding domain E2R47_16850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2R47_16855 PF05681 Fumarate hydratase (Fumerase) E2R47_16860 PF05683 Fumarase C-terminus E2R47_16860 PF05681 Fumarate hydratase (Fumerase) E2R47_16865 PF00793 DAHP synthetase I family E2R47_16870 PF13985 YbgS-like protein E2R47_16875 PF01545 Cation efflux family E2R47_16880 PF04973 Nicotinamide mononucleotide transporter E2R47_16885 PF02445 Quinolinate synthetase A protein E2R47_16915 PF13174 Tetratricopeptide repeat E2R47_16915 PF16331 TolA binding protein trimerisation E2R47_16920 PF00691 OmpA family E2R47_16925 PF07676 WD40-like Beta Propeller Repeat E2R47_16925 PF04052 TolB amino-terminal domain E2R47_16930 PF06519 TolA C-terminal E2R47_16935 PF02472 Biopolymer transport protein ExbD/TolR E2R47_16940 PF01618 MotA/TolQ/ExbB proton channel family E2R47_16945 PF03061 Thioesterase superfamily E2R47_16950 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) E2R47_16955 PF08173 Membrane bound YbgT-like protein E2R47_16960 PF02322 Cytochrome bd terminal oxidase subunit II E2R47_16965 PF01654 Cytochrome bd terminal oxidase subunit I E2R47_16970 PF00549 CoA-ligase E2R47_16970 PF02629 CoA binding domain E2R47_16975 PF00549 CoA-ligase E2R47_16975 PF08442 ATP-grasp domain E2R47_16980 PF00364 Biotin-requiring enzyme E2R47_16980 PF02817 e3 binding domain E2R47_16980 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) E2R47_16985 PF16870 2-oxoglutarate dehydrogenase C-terminal E2R47_16985 PF00676 Dehydrogenase E1 component E2R47_16985 PF02779 Transketolase, pyrimidine binding domain E2R47_16985 PF16078 2-oxoglutarate dehydrogenase N-terminus E2R47_16990 PF13085 2Fe-2S iron-sulfur cluster binding domain E2R47_16995 PF00890 FAD binding domain E2R47_16995 PF02910 Fumarate reductase flavoprotein C-term E2R47_17000 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit E2R47_17005 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit E2R47_17010 PF00285 Citrate synthase, C-terminal domain E2R47_17015 PF05145 Transition state regulatory protein AbrB E2R47_17020 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain E2R47_17020 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain E2R47_17020 PF06827 Zinc finger found in FPG and IleRS E2R47_17025 PF03746 LamB/YcsF family E2R47_17030 PF02626 Carboxyltransferase domain, subdomain A and B E2R47_17035 PF02682 Carboxyltransferase domain, subdomain C and D E2R47_17040 PF01784 NIF3 (NGG1p interacting factor 3) E2R47_17050 PF00854 POT family E2R47_17055 PF00875 DNA photolyase E2R47_17055 PF03441 FAD binding domain of DNA photolyase E2R47_17060 PF10725 Protein of unknown function (DUF2517) E2R47_17065 PF09604 F subunit of K+-transporting ATPase (Potass_KdpF) E2R47_17070 PF03814 Potassium-transporting ATPase A subunit E2R47_17080 PF02669 K+-transporting ATPase, c chain E2R47_17085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E2R47_17085 PF13492 GAF domain E2R47_17085 PF13493 Domain of unknown function (DUF4118) E2R47_17085 PF00512 His Kinase A (phospho-acceptor) domain E2R47_17085 PF02702 Osmosensitive K+ channel His kinase sensor domain E2R47_17090 PF00072 Response regulator receiver domain E2R47_17090 PF00486 Transcriptional regulatory protein, C terminal E2R47_17100 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain E2R47_17100 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain E2R47_17100 PF01276 Orn/Lys/Arg decarboxylase, major domain E2R47_17105 PF13520 Amino acid permease E2R47_17115 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II E2R47_17115 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain E2R47_17115 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I E2R47_17115 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III E2R47_17120 PF17206 SeqA protein N-terminal domain E2R47_17120 PF03925 SeqA protein C-terminal domain E2R47_17125 PF12697 Alpha/beta hydrolase family E2R47_17130 PF01402 Ribbon-helix-helix protein, copG family E2R47_17135 PF00258 Flavodoxin E2R47_17140 PF01475 Ferric uptake regulator family E2R47_17145 PF03466 LysR substrate binding domain E2R47_17145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2R47_17150 PF00890 FAD binding domain E2R47_17150 PF14537 Cytochrome c3 E2R47_17160 PF07690 Major Facilitator Superfamily E2R47_17165 PF13982 YbfN-like lipoprotein E2R47_17170 PF03573 outer membrane porin, OprD family E2R47_17175 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain E2R47_17175 PF00749 tRNA synthetases class I (E and Q), catalytic domain E2R47_17180 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 E2R47_17180 PF00367 phosphotransferase system, EIIB E2R47_17180 PF02378 Phosphotransferase system, EIIC E2R47_17185 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase E2R47_17190 PF01979 Amidohydrolase family E2R47_17195 PF01047 MarR family E2R47_17195 PF00480 ROK family E2R47_17200 PF13344 Haloacid dehalogenase-like hydrolase E2R47_17205 PF13537 Glutamine amidotransferase domain E2R47_17205 PF00733 Asparagine synthase E2R47_17250 PF01494 FAD binding domain E2R47_17255 PF00919 Uncharacterized protein family UPF0004 E2R47_17255 PF04055 Radical SAM superfamily E2R47_17255 PF01938 TRAM domain E2R47_17260 PF02562 PhoH-like protein E2R47_17265 PF02130 Uncharacterized protein family UPF0054 E2R47_17270 PF03471 Transporter associated domain E2R47_17270 PF00571 CBS domain E2R47_17275 PF00795 Carbon-nitrogen hydrolase E2R47_17280 PF00497 Bacterial extracellular solute-binding proteins, family 3 E2R47_17285 PF00528 Binding-protein-dependent transport system inner membrane component E2R47_17290 PF00528 Binding-protein-dependent transport system inner membrane component E2R47_17295 PF00005 ABC transporter E2R47_17300 PF01156 Inosine-uridine preferring nucleoside hydrolase E2R47_17310 PF00012 Hsp70 protein E2R47_17320 PF06889 Protein of unknown function (DUF1266) E2R47_17330 PF06889 Protein of unknown function (DUF1266) E2R47_17340 PF07295 Zinc-ribbon containing domain E2R47_17345 PF02954 Bacterial regulatory protein, Fis family E2R47_17345 PF00158 Sigma-54 interaction domain E2R47_17345 PF00989 PAS fold E2R47_17350 PF03812 2-keto-3-deoxygluconate permease E2R47_17355 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus E2R47_17365 PF13603 Leucyl-tRNA synthetase, Domain 2 E2R47_17365 PF08264 Anticodon-binding domain of tRNA E2R47_17365 PF00133 tRNA synthetases class I (I, L, M and V) E2R47_17370 PF04390 Lipopolysaccharide-assembly E2R47_17375 PF14840 Processivity clamp loader gamma complex DNA pol III C-term E2R47_17375 PF06144 DNA polymerase III, delta subunit E2R47_17380 PF01467 Cytidylyltransferase-like E2R47_17385 PF00155 Aminotransferase class I and II E2R47_17390 PF00300 Histidine phosphatase superfamily (branch 1) E2R47_17400 PF02590 Predicted SPOUT methyltransferase E2R47_17405 PF03717 Penicillin-binding Protein dimerisation domain E2R47_17405 PF00905 Penicillin binding protein transpeptidase domain E2R47_17410 PF01098 Cell cycle protein E2R47_17415 PF03330 Lytic transglycolase E2R47_17415 PF05036 Sporulation related domain E2R47_17420 PF00768 D-alanyl-D-alanine carboxypeptidase E2R47_17420 PF07943 Penicillin-binding protein 5, C-terminal domain E2R47_17425 PF04359 Protein of unknown function (DUF493) E2R47_17430 PF03099 Biotin/lipoate A/B protein ligase family E2R47_17435 PF03466 LysR substrate binding domain E2R47_17435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2R47_17440 PF04055 Radical SAM superfamily E2R47_17440 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family E2R47_17445 PF02416 mttA/Hcf106 family E2R47_17450 PF00795 Carbon-nitrogen hydrolase E2R47_17455 PF02537 CrcB-like protein, Camphor Resistance (CrcB) E2R47_17460 PF00313 'Cold-shock' DNA-binding domain E2R47_17465 PF07017 Antimicrobial peptide resistance and lipid A acylation protein PagP E2R47_17470 PF03606 C4-dicarboxylate anaerobic carrier E2R47_17475 PF00072 Response regulator receiver domain E2R47_17475 PF12431 Transcriptional regulator E2R47_17480 PF17203 Single cache domain 3 E2R47_17480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E2R47_17480 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain E2R47_17480 PF00989 PAS fold E2R47_17485 PF08218 Citrate lyase ligase C-terminal domain E2R47_17490 PF06857 Malonate decarboxylase delta subunit (MdcD) E2R47_17495 PF03328 HpcH/HpaI aldolase/citrate lyase family E2R47_17500 PF04223 Citrate lyase, alpha subunit (CitF) E2R47_17505 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase E2R47_17510 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase E2R47_17515 PF00939 Sodium:sulfate symporter transmembrane region E2R47_17520 PF00445 Ribonuclease T2 family E2R47_17525 PF14760 Rnk N-terminus E2R47_17525 PF01272 Transcription elongation factor, GreA/GreB, C-term E2R47_17530 PF08240 Alcohol dehydrogenase GroES-like domain E2R47_17530 PF00107 Zinc-binding dehydrogenase E2R47_17530 PF13823 Alcohol dehydrogenase GroES-associated E2R47_17535 PF00582 Universal stress protein family E2R47_17545 PF13247 4Fe-4S dicluster domain E2R47_17550 PF04879 Molybdopterin oxidoreductase Fe4S4 domain E2R47_17550 PF00384 Molybdopterin oxidoreductase E2R47_17550 PF01568 Molydopterin dinucleotide binding domain E2R47_17560 PF07992 Pyridine nucleotide-disulphide oxidoreductase E2R47_17560 PF13192 Thioredoxin domain E2R47_17565 PF00578 AhpC/TSA family E2R47_17565 PF10417 C-terminal domain of 1-Cys peroxiredoxin E2R47_17570 PF13098 Thioredoxin-like domain E2R47_17580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2R47_17580 PF03466 LysR substrate binding domain E2R47_17585 PF01507 Phosphoadenosine phosphosulfate reductase family E2R47_17585 PF11922 Domain of unknown function (DUF3440) E2R47_17590 PF02195 ParB-like nuclease domain E2R47_17595 PF00155 Aminotransferase class I and II E2R47_17600 PF00465 Iron-containing alcohol dehydrogenase E2R47_17605 PF04328 Selenoprotein, putative E2R47_17610 PF13722 5TM C-terminal transporter carbon starvation CstA E2R47_17610 PF02554 Carbon starvation protein CstA E2R47_17615 PF03061 Thioesterase superfamily E2R47_17625 PF00550 Phosphopantetheine attachment site E2R47_17625 PF00857 Isochorismatase family E2R47_17630 PF00501 AMP-binding enzyme E2R47_17630 PF13193 AMP-binding enzyme C-terminal domain E2R47_17635 PF00425 chorismate binding enzyme E2R47_17640 PF01497 Periplasmic binding protein E2R47_17645 PF05977 Transmembrane secretion effector E2R47_17650 PF01032 FecCD transport family E2R47_17655 PF01032 FecCD transport family E2R47_17660 PF00005 ABC transporter E2R47_17665 PF02706 Chain length determinant protein E2R47_17670 PF00975 Thioesterase domain E2R47_17670 PF00501 AMP-binding enzyme E2R47_17670 PF13193 AMP-binding enzyme C-terminal domain E2R47_17670 PF00550 Phosphopantetheine attachment site E2R47_17670 PF00668 Condensation domain E2R47_17675 PF03621 MbtH-like protein E2R47_17680 PF11806 Domain of unknown function (DUF3327) E2R47_17680 PF00756 Putative esterase E2R47_17685 PF07715 TonB-dependent Receptor Plug Domain E2R47_17685 PF00593 TonB dependent receptor E2R47_17690 PF01648 4'-phosphopantetheinyl transferase superfamily E2R47_17690 PF17837 4'-phosphopantetheinyl transferase N-terminal domain E2R47_17695 PF04107 Glutamate-cysteine ligase family 2(GCS2) E2R47_17700 PF06643 Protein of unknown function (DUF1158) E2R47_17705 PF12833 Helix-turn-helix domain E2R47_17710 PF16295 Tetracyclin repressor-like, C-terminal domain E2R47_17710 PF00440 Bacterial regulatory proteins, tetR family E2R47_17715 PF04237 YjbR E2R47_17720 PF00881 Nitroreductase family E2R47_17725 PF00657 GDSL-like Lipase/Acylhydrolase E2R47_17725 PF03797 Autotransporter beta-domain E2R47_17730 PF00924 Mechanosensitive ion channel E2R47_17735 PF00324 Amino acid permease E2R47_17745 PF04224 Protein of unknown function, DUF417 E2R47_17750 PF07338 Protein of unknown function (DUF1471) E2R47_17755 PF07992 Pyridine nucleotide-disulphide oxidoreductase E2R47_17755 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain E2R47_17760 PF12852 Cupin E2R47_17760 PF12833 Helix-turn-helix domain E2R47_17765 PF00873 AcrB/AcrD/AcrF family E2R47_17770 PF00672 HAMP domain E2R47_17770 PF00512 His Kinase A (phospho-acceptor) domain E2R47_17770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E2R47_17780 PF04138 GtrA-like protein E2R47_17785 PF00535 Glycosyl transferase family 2 E2R47_17820 PF00196 Bacterial regulatory proteins, luxR family E2R47_17835 PF00072 Response regulator receiver domain E2R47_17835 PF00196 Bacterial regulatory proteins, luxR family E2R47_17840 PF00419 Fimbrial protein E2R47_17845 PF00419 Fimbrial protein E2R47_17850 PF13953 PapC C-terminal domain E2R47_17850 PF13954 PapC N-terminal domain E2R47_17850 PF00577 Outer membrane usher protein E2R47_17855 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain E2R47_17855 PF02753 Pili assembly chaperone PapD, C-terminal domain E2R47_17865 PF00419 Fimbrial protein E2R47_17875 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain E2R47_17875 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain E2R47_17885 PF04307 LexA-binding, inner membrane-associated putative hydrolase E2R47_17900 PF01406 tRNA synthetases class I (C) catalytic domain E2R47_17900 PF09190 DALR domain E2R47_17905 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD E2R47_17910 PF12850 Calcineurin-like phosphoesterase superfamily domain E2R47_17915 PF00731 AIR carboxylase E2R47_17920 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain E2R47_17920 PF02222 ATP-grasp domain E2R47_17930 PF00528 Binding-protein-dependent transport system inner membrane component E2R47_17935 PF00005 ABC transporter E2R47_17935 PF09383 NIL domain E2R47_17940 PF03180 NLPA lipoprotein E2R47_17955 PF00005 ABC transporter E2R47_17960 PF13472 GDSL-like Lipase/Acylhydrolase family E2R47_17965 PF00106 short chain dehydrogenase E2R47_17970 PF00085 Thioredoxin E2R47_17975 PF03649 Uncharacterised protein family (UPF0014) E2R47_17980 PF00005 ABC transporter E2R47_17985 PF16200 C-terminal region of band_7 E2R47_17985 PF01145 SPFH domain / Band 7 family E2R47_17990 PF01957 NfeD-like C-terminal, partner-binding E2R47_17995 PF13411 MerR HTH family regulatory protein E2R47_18000 PF00403 Heavy-metal-associated domain E2R47_18010 PF01963 TraB family E2R47_18015 PF04073 Aminoacyl-tRNA editing domain E2R47_18020 PF00149 Calcineurin-like phosphoesterase E2R47_18020 PF02872 5'-nucleotidase, C-terminal domain E2R47_18025 PF07690 Major Facilitator Superfamily E2R47_18030 PF02254 TrkA-N domain E2R47_18030 PF00999 Sodium/hydrogen exchanger family E2R47_18035 PF00294 pfkB family carbohydrate kinase E2R47_18040 PF07859 alpha/beta hydrolase fold E2R47_18045 PF00762 Ferrochelatase E2R47_18055 PF05191 Adenylate kinase, active site lid E2R47_18060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E2R47_18060 PF00183 Hsp90 protein E2R47_18065 PF13662 Toprim domain E2R47_18065 PF02132 RecR protein E2R47_18070 PF02575 YbaB/EbfC DNA-binding family E2R47_18075 PF12169 DNA polymerase III subunits gamma and tau domain III E2R47_18075 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding E2R47_18075 PF12170 DNA polymerase III tau subunit V interacting with alpha E2R47_18080 PF00156 Phosphoribosyl transferase domain E2R47_18085 PF04304 Protein of unknown function (DUF454) E2R47_18090 PF07445 Primosomal replication protein priC E2R47_18095 PF10689 Protein of unknown function (DUF2496) E2R47_18100 PF04754 Putative transposase, YhgA-like E2R47_18105 PF12795 Mechanosensitive ion channel porin domain E2R47_18105 PF12794 Mechanosensitive ion channel inner membrane domain 1 E2R47_18105 PF00924 Mechanosensitive ion channel E2R47_18110 PF08361 MAATS-type transcriptional repressor, C-terminal region E2R47_18110 PF00440 Bacterial regulatory proteins, tetR family E2R47_18115 PF00529 HlyD membrane-fusion protein of T1SS E2R47_18115 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion E2R47_18120 PF00873 AcrB/AcrD/AcrF family E2R47_18125 PF10757 Biofilm formation regulator YbaJ E2R47_18130 PF05321 Haemolysin expression modulating protein E2R47_18135 PF12464 Maltose acetyltransferase E2R47_18135 PF14602 Hexapeptide repeat of succinyl-transferase E2R47_18140 PF10777 Inner membrane protein YlaC E2R47_18145 PF00444 Ribosomal protein L36 E2R47_18150 PF01197 Ribosomal protein L31 E2R47_18155 PF12792 CSS motif domain associated with EAL E2R47_18155 PF00563 EAL domain E2R47_18165 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain E2R47_18170 PF09619 Type III secretion system lipoprotein chaperone (YscW) E2R47_18180 PF00909 Ammonium Transporter Family E2R47_18185 PF00543 Nitrogen regulatory protein P-II E2R47_18190 PF00005 ABC transporter E2R47_18190 PF00664 ABC transporter transmembrane region E2R47_18195 PF00005 ABC transporter E2R47_18195 PF00664 ABC transporter transmembrane region E2R47_18200 PF01037 Lrp/AsnC ligand binding domain E2R47_18200 PF13404 AsnC-type helix-turn-helix domain E2R47_18215 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle E2R47_18215 PF12793 Sugar transport-related sRNA regulator N-term E2R47_18220 PF06508 Queuosine biosynthesis protein QueC E2R47_18235 PF13145 PPIC-type PPIASE domain E2R47_18240 PF00216 Bacterial DNA-binding protein E2R47_18245 PF00004 ATPase family associated with various cellular activities (AAA) E2R47_18245 PF02190 ATP-dependent protease La (LON) substrate-binding domain E2R47_18245 PF05362 Lon protease (S16) C-terminal proteolytic domain E2R47_18250 PF06689 ClpX C4-type zinc finger E2R47_18250 PF07724 AAA domain (Cdc48 subfamily) E2R47_18250 PF10431 C-terminal, D2-small domain, of ClpB protein E2R47_18255 PF00574 Clp protease E2R47_18260 PF05697 Bacterial trigger factor protein (TF) E2R47_18260 PF05698 Bacterial trigger factor protein (TF) C-terminus E2R47_18260 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase E2R47_18270 PF01722 BolA-like protein E2R47_18275 PF03923 Uncharacterized lipoprotein E2R47_18275 PF08139 Prokaryotic membrane lipoprotein lipid attachment site E2R47_18280 PF07690 Major Facilitator Superfamily E2R47_18285 PF00116 Cytochrome C oxidase subunit II, periplasmic domain E2R47_18285 PF06481 COX Aromatic Rich Motif E2R47_18290 PF00115 Cytochrome C and Quinol oxidase polypeptide I E2R47_18295 PF00510 Cytochrome c oxidase subunit III E2R47_18300 PF03626 Prokaryotic Cytochrome C oxidase subunit IV E2R47_18305 PF01040 UbiA prenyltransferase family E2R47_18325 PF07690 Major Facilitator Superfamily E2R47_18330 PF04461 Protein of unknown function (DUF520) E2R47_18335 PF08546 Ketopantoate reductase PanE/ApbA C terminal E2R47_18335 PF02558 Ketopantoate reductase PanE/ApbA E2R47_18340 PF01965 DJ-1/PfpI family E2R47_18350 PF00266 Aminotransferase class-V E2R47_18355 PF07702 UTRA domain E2R47_18355 PF00392 Bacterial regulatory proteins, gntR family E2R47_18360 PF01547 Bacterial extracellular solute-binding protein E2R47_18365 PF08402 TOBE domain E2R47_18365 PF00005 ABC transporter E2R47_18370 PF00528 Binding-protein-dependent transport system inner membrane component E2R47_18375 PF00528 Binding-protein-dependent transport system inner membrane component E2R47_18380 PF02926 THUMP domain E2R47_18380 PF02568 Thiamine biosynthesis protein (ThiI) E2R47_18385 PF02609 Exonuclease VII small subunit E2R47_18390 PF00348 Polyprenyl synthetase E2R47_18395 PF13292 1-deoxy-D-xylulose-5-phosphate synthase E2R47_18395 PF02779 Transketolase, pyrimidine binding domain E2R47_18395 PF02780 Transketolase, C-terminal domain E2R47_18400 PF00248 Aldo/keto reductase family E2R47_18405 PF04608 Phosphatidylglycerophosphatase A E2R47_18410 PF02769 AIR synthase related protein, C-terminal domain E2R47_18410 PF00586 AIR synthase related protein, N-terminal domain E2R47_18415 PF01029 NusB family E2R47_18420 PF00885 6,7-dimethyl-8-ribityllumazine synthase E2R47_18425 PF01872 RibD C-terminal domain E2R47_18425 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region E2R47_18430 PF03477 ATP cone domain E2R47_18435 PF11622 Protein of unknown function (DUF3251) E2R47_18440 PF03502 Nucleoside-specific channel-forming protein, Tsx E2R47_18455 PF01844 HNH endonuclease E2R47_18470 PF02355 Protein export membrane protein E2R47_18470 PF07549 SecD/SecF GG Motif E2R47_18475 PF02355 Protein export membrane protein E2R47_18475 PF13721 SecD export protein N-terminal TM region E2R47_18475 PF07549 SecD/SecF GG Motif E2R47_18480 PF02699 Preprotein translocase subunit E2R47_18485 PF01702 Queuine tRNA-ribosyltransferase E2R47_18490 PF02547 Queuosine biosynthesis protein E2R47_18495 PF04336 Acyl carrier protein phosphodiesterase E2R47_18500 PF10417 C-terminal domain of 1-Cys peroxiredoxin E2R47_18500 PF00578 AhpC/TSA family E2R47_18510 PF02903 Alpha amylase, N-terminal ig-like domain E2R47_18510 PF00128 Alpha amylase, catalytic domain E2R47_18515 PF00324 Amino acid permease E2R47_18520 PF05525 Branched-chain amino acid transport protein E2R47_18525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E2R47_18525 PF00512 His Kinase A (phospho-acceptor) domain E2R47_18525 PF00989 PAS fold E2R47_18525 PF11808 Phosphate regulon sensor protein PhoR E2R47_18530 PF00072 Response regulator receiver domain E2R47_18530 PF00486 Transcriptional regulatory protein, C terminal E2R47_18535 PF12320 Type 5 capsule protein repressor C-terminal domain E2R47_18535 PF00149 Calcineurin-like phosphoesterase E2R47_18540 PF13476 AAA domain E2R47_18545 PF07690 Major Facilitator Superfamily E2R47_18550 PF00480 ROK family E2R47_18555 PF04381 Putative exonuclease, RdgC E2R47_18560 PF06865 Pyrimidine/purine nucleoside phosphorylase E2R47_18565 PF07302 AroM protein E2R47_18570 PF16362 YaiA protein E2R47_18575 PF01202 Shikimate kinase E2R47_18580 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 E2R47_18585 PF03807 NADP oxidoreductase coenzyme F420-dependent E2R47_18585 PF14748 Pyrroline-5-carboxylate reductase dimerisation E2R47_18590 PF05230 MASE2 domain E2R47_18590 PF00990 Diguanylate cyclase, GGDEF domain E2R47_18595 PF07769 psiF repeat E2R47_18600 PF10796 Sigma-S stabilisation anti-adaptor protein E2R47_18605 PF07690 Major Facilitator Superfamily E2R47_18615 PF07478 D-ala D-ala ligase C-terminus E2R47_18615 PF01820 D-ala D-ala ligase N-terminus E2R47_18620 PF10953 Protein of unknown function (DUF2754) E2R47_18625 PF10954 Protein of unknown function (DUF2755) E2R47_18630 PF07759 Protein of unknown function (DUF1615) E2R47_18635 PF05992 SbmA/BacA-like family E2R47_18645 PF00144 Beta-lactamase E2R47_18650 PF15977 Winged helix-turn-helix DNA binding E2R47_18655 PF03797 Autotransporter beta-domain E2R47_18660 PF00490 Delta-aminolevulinic acid dehydratase E2R47_18665 PF16177 Acetyl-coenzyme A synthetase N-terminus E2R47_18665 PF00501 AMP-binding enzyme E2R47_18665 PF13193 AMP-binding enzyme C-terminal domain E2R47_18670 PF03972 MmgE/PrpD family E2R47_18675 PF00285 Citrate synthase, C-terminal domain E2R47_18685 PF06506 Propionate catabolism activator E2R47_18685 PF02954 Bacterial regulatory protein, Fis family E2R47_18685 PF00158 Sigma-54 interaction domain E2R47_18690 PF07338 Protein of unknown function (DUF1471) E2R47_18695 PF01810 LysE type translocator E2R47_18700 PF00593 TonB dependent receptor E2R47_18700 PF07715 TonB-dependent Receptor Plug Domain E2R47_18715 PF02322 Cytochrome bd terminal oxidase subunit II E2R47_18720 PF01654 Cytochrome bd terminal oxidase subunit I E2R47_18730 PF04851 Type III restriction enzyme, res subunit E2R47_18730 PF08774 VRR-NUC domain E2R47_18735 PF18273 Type III R-M EcoP15I C-terminal domain E2R47_18735 PF01555 DNA methylase E2R47_18740 PF07690 Major Facilitator Superfamily E2R47_18750 PF00376 MerR family regulatory protein E2R47_18750 PF09278 MerR, DNA binding E2R47_18755 PF00403 Heavy-metal-associated domain E2R47_18760 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion E2R47_18765 PF00873 AcrB/AcrD/AcrF family E2R47_18770 PF02321 Outer membrane efflux protein E2R47_18790 PF13505 Outer membrane protein beta-barrel domain E2R47_18805 PF00563 EAL domain E2R47_18805 PF12792 CSS motif domain associated with EAL E2R47_18820 PF16970 Type-1 fimbrial protein, A E2R47_18825 PF02753 Pili assembly chaperone PapD, C-terminal domain E2R47_18825 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain E2R47_18830 PF13954 PapC N-terminal domain E2R47_18830 PF13953 PapC C-terminal domain E2R47_18830 PF00577 Outer membrane usher protein E2R47_18840 PF02753 Pili assembly chaperone PapD, C-terminal domain E2R47_18840 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain E2R47_18855 PF03466 LysR substrate binding domain E2R47_18855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2R47_18860 PF00561 alpha/beta hydrolase fold E2R47_18865 PF01557 Fumarylacetoacetate (FAA) hydrolase family E2R47_18870 PF00694 Aconitase C-terminal domain E2R47_18875 PF00330 Aconitase family (aconitate hydratase) E2R47_18880 PF07690 Major Facilitator Superfamily E2R47_18885 PF08986 Domain of unknown function (DUF1889) E2R47_18890 PF08841 Diol dehydratase reactivase ATPase-like domain E2R47_18890 PF18427 DD-reactivating factor swiveling domain E2R47_18895 PF08841 Diol dehydratase reactivase ATPase-like domain E2R47_18895 PF18427 DD-reactivating factor swiveling domain E2R47_18905 PF00589 Phage integrase family E2R47_18905 PF13356 Arm DNA-binding domain E2R47_18915 PF00171 Aldehyde dehydrogenase family E2R47_18920 PF00696 Amino acid kinase family E2R47_18920 PF01472 PUA domain E2R47_18925 PF00267 Gram-negative porin E2R47_18930 PF07417 Sigma factor-binding transcriptional regulator Crl E2R47_18935 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) E2R47_18940 PF00156 Phosphoribosyl transferase domain E2R47_18945 PF01546 Peptidase family M20/M25/M40 E2R47_18945 PF07687 Peptidase dimerisation domain E2R47_18950 PF00472 RF-1 domain E2R47_18960 PF00817 impB/mucB/samB family E2R47_18960 PF11799 impB/mucB/samB family C-terminal domain E2R47_18960 PF11798 IMS family HHH motif E2R47_18965 PF03734 L,D-transpeptidase catalytic domain E2R47_18970 PF13230 Glutamine amidotransferases class-II E2R47_18975 PF13580 SIS domain E2R47_18980 PF09317 Domain of unknown function (DUF1974) E2R47_18980 PF02771 Acyl-CoA dehydrogenase, N-terminal domain E2R47_18980 PF02770 Acyl-CoA dehydrogenase, middle domain E2R47_18980 PF00441 Acyl-CoA dehydrogenase, C-terminal domain E2R47_18985 PF00795 Carbon-nitrogen hydrolase E2R47_18995 PF13505 Outer membrane protein beta-barrel domain E2R47_19005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2R47_19005 PF03466 LysR substrate binding domain E2R47_19025 PF13954 PapC N-terminal domain E2R47_19025 PF00577 Outer membrane usher protein E2R47_19025 PF13953 PapC C-terminal domain E2R47_19030 PF02753 Pili assembly chaperone PapD, C-terminal domain E2R47_19030 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain E2R47_19075 PF05593 RHS Repeat E2R47_19075 PF03527 RHS protein E2R47_19075 PF15606 Bacterial toxin 34 E2R47_19090 PF03527 RHS protein E2R47_19090 PF14220 Domain of unknown function (DUF4329) E2R47_19090 PF05593 RHS Repeat E2R47_19100 PF04717 Type VI secretion system, phage-baseplate injector E2R47_19100 PF16671 Actin cross-linking domain E2R47_19135 PF00691 OmpA family E2R47_19135 PF05736 OprF membrane domain E2R47_19190 PF00004 ATPase family associated with various cellular activities (AAA) E2R47_19190 PF10431 C-terminal, D2-small domain, of ClpB protein E2R47_19190 PF17871 AAA lid domain E2R47_19190 PF07724 AAA domain (Cdc48 subfamily) E2R47_19230 PF00929 Exonuclease E2R47_19235 PF00075 RNase H E2R47_19240 PF08241 Methyltransferase domain E2R47_19245 PF16123 Hydroxyacylglutathione hydrolase C-terminus E2R47_19245 PF00753 Metallo-beta-lactamase superfamily E2R47_19250 PF01464 Transglycosylase SLT domain E2R47_19250 PF01476 LysM domain E2R47_19255 PF08241 Methyltransferase domain E2R47_19260 PF03372 Endonuclease/Exonuclease/phosphatase family E2R47_19265 PF07690 Major Facilitator Superfamily E2R47_19270 PF03466 LysR substrate binding domain E2R47_19270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2R47_19275 PF00248 Aldo/keto reductase family E2R47_19315 PF09383 NIL domain E2R47_19315 PF00005 ABC transporter E2R47_19320 PF00528 Binding-protein-dependent transport system inner membrane component E2R47_19325 PF03180 NLPA lipoprotein E2R47_19330 PF16358 RcsF lipoprotein E2R47_19335 PF18389 TrmO C-terminal domain E2R47_19335 PF01980 tRNA-methyltransferase O E2R47_19340 PF04073 Aminoacyl-tRNA editing domain E2R47_19340 PF03129 Anticodon binding domain E2R47_19340 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) E2R47_19345 PF04170 NlpE N-terminal domain E2R47_19345 PF17185 NlpE C-terminal OB domain E2R47_19350 PF00472 RF-1 domain E2R47_19355 PF07152 YaeQ protein E2R47_19360 PF06786 Uncharacterised protein family (UPF0253) E2R47_19365 PF07073 Modulator of Rho-dependent transcription termination (ROF) E2R47_19370 PF11734 TilS substrate C-terminal domain E2R47_19370 PF09179 TilS substrate binding domain E2R47_19370 PF01171 PP-loop family E2R47_19375 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily E2R47_19385 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading E2R47_19385 PF18416 N-acetylglucosamine binding protein domain 2 E2R47_19390 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit E2R47_19395 PF01336 OB-fold nucleic acid binding domain E2R47_19395 PF02811 PHP domain E2R47_19395 PF14579 Helix-hairpin-helix motif E2R47_19395 PF17657 Bacterial DNA polymerase III alpha subunit finger domain E2R47_19395 PF07733 Bacterial DNA polymerase III alpha NTPase domain E2R47_19400 PF01351 Ribonuclease HII E2R47_19405 PF02684 Lipid-A-disaccharide synthetase E2R47_19410 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 E2R47_19410 PF00132 Bacterial transferase hexapeptide (six repeats) E2R47_19415 PF07977 FabA-like domain E2R47_19420 PF00132 Bacterial transferase hexapeptide (six repeats) E2R47_19420 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD E2R47_19425 PF03938 Outer membrane protein (OmpH-like) E2R47_19430 PF01103 Surface antigen E2R47_19430 PF07244 Surface antigen variable number repeat E2R47_19435 PF02163 Peptidase family M50 E2R47_19435 PF17820 PDZ domain E2R47_19445 PF01255 Putative undecaprenyl diphosphate synthase E2R47_19450 PF13288 DXP reductoisomerase C-terminal domain E2R47_19450 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain E2R47_19450 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase E2R47_19455 PF01765 Ribosome recycling factor E2R47_19460 PF00696 Amino acid kinase family E2R47_19465 PF00889 Elongation factor TS E2R47_19470 PF00318 Ribosomal protein S2 E2R47_19480 PF00557 Metallopeptidase family M24 E2R47_19485 PF01966 HD domain E2R47_19485 PF01909 Nucleotidyltransferase domain E2R47_19485 PF01842 ACT domain E2R47_19485 PF08335 GlnD PII-uridylyltransferase E2R47_19490 PF00132 Bacterial transferase hexapeptide (six repeats) E2R47_19490 PF14602 Hexapeptide repeat of succinyl-transferase E2R47_19490 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal E2R47_19495 PF07690 Major Facilitator Superfamily E2R47_19495 PF00083 Sugar (and other) transporter E2R47_19500 PF11944 Protein of unknown function (DUF3461) E2R47_19505 PF13556 PucR C-terminal helix-turn-helix domain E2R47_19505 PF17853 GGDEF-like domain E2R47_19505 PF05651 Putative sugar diacid recognition E2R47_19510 PF00595 PDZ domain E2R47_19515 PF01966 HD domain E2R47_19515 PF13286 Phosphohydrolase-associated domain E2R47_19520 PF01048 Phosphorylase superfamily E2R47_19525 PF01497 Periplasmic binding protein E2R47_19530 PF03458 UPF0126 domain E2R47_19535 PF01521 Iron-sulphur cluster biosynthesis E2R47_19540 PF00654 Voltage gated chloride channel E2R47_19545 PF00202 Aminotransferase class-III E2R47_19550 PF11245 Protein of unknown function (DUF2544) E2R47_19555 PF00419 Fimbrial protein E2R47_19560 PF00419 Fimbrial protein E2R47_19565 PF00419 Fimbrial protein E2R47_19570 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain E2R47_19570 PF02753 Pili assembly chaperone PapD, C-terminal domain E2R47_19575 PF13954 PapC N-terminal domain E2R47_19575 PF00577 Outer membrane usher protein E2R47_19575 PF13953 PapC C-terminal domain E2R47_19590 PF01032 FecCD transport family E2R47_19595 PF01497 Periplasmic binding protein E2R47_19600 PF00005 ABC transporter E2R47_19605 PF07715 TonB-dependent Receptor Plug Domain E2R47_19605 PF00593 TonB dependent receptor E2R47_19610 PF14812 Transmembrane domain of transglycosylase PBP1 at N-terminal E2R47_19610 PF00912 Transglycosylase E2R47_19610 PF00905 Penicillin binding protein transpeptidase domain E2R47_19610 PF14814 Bifunctional transglycosylase second domain E2R47_19615 PF00270 DEAD/DEAH box helicase E2R47_19615 PF04408 Helicase associated domain (HA2) E2R47_19615 PF00271 Helicase conserved C-terminal domain E2R47_19615 PF08482 ATP-dependent helicase C-terminal E2R47_19620 PF02834 LigT like Phosphoesterase E2R47_19625 PF03749 Sugar fermentation stimulation protein RE domain E2R47_19625 PF17746 SfsA N-terminal OB domain E2R47_19630 PF01258 Prokaryotic dksA/traR C4-type zinc finger E2R47_19635 PF00749 tRNA synthetases class I (E and Q), catalytic domain E2R47_19640 PF01743 Poly A polymerase head domain E2R47_19640 PF12626 Polymerase A arginine-rich C-terminus E2R47_19640 PF12627 Probable RNA and SrmB- binding site of polymerase A E2R47_19645 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) E2R47_19650 PF02548 Ketopantoate hydroxymethyltransferase E2R47_19655 PF02569 Pantoate-beta-alanine ligase E2R47_19660 PF02261 Aspartate decarboxylase E2R47_19665 PF01522 Polysaccharide deacetylase E2R47_19670 PF03610 PTS system fructose IIA component E2R47_19680 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain E2R47_19680 PF02753 Pili assembly chaperone PapD, C-terminal domain E2R47_19685 PF13954 PapC N-terminal domain E2R47_19685 PF13953 PapC C-terminal domain E2R47_19685 PF00577 Outer membrane usher protein E2R47_19690 PF00419 Fimbrial protein E2R47_19695 PF01061 ABC-2 type transporter E2R47_19700 PF00005 ABC transporter E2R47_19705 PF00484 Carbonic anhydrase E2R47_19710 PF00156 Phosphoribosyl transferase domain E2R47_19715 PF01011 PQQ enzyme repeat E2R47_19720 PF07731 Multicopper oxidase E2R47_19720 PF07732 Multicopper oxidase E2R47_19720 PF00394 Multicopper oxidase E2R47_19725 PF09691 Type II secretion system pilotin lipoprotein (PulS_OutS) E2R47_19730 PF17284 Spermidine synthase tetramerisation domain E2R47_19735 PF02675 S-adenosylmethionine decarboxylase E2R47_19740 PF08220 DeoR-like helix-turn-helix domain E2R47_19740 PF00455 DeoR C terminal sensor domain E2R47_19745 PF04166 Pyridoxal phosphate biosynthetic protein PdxA E2R47_19750 PF17042 Nucleotide-binding C-terminal domain E2R47_19750 PF07005 Sugar-binding N-terminal domain E2R47_19755 PF03812 2-keto-3-deoxygluconate permease E2R47_19760 PF06062 Uncharacterised protein family (UPF0231) E2R47_19775 PF00330 Aconitase family (aconitate hydratase) E2R47_19775 PF06434 Aconitate hydratase 2 N-terminus E2R47_19775 PF11791 Aconitate B N-terminal domain E2R47_19780 PF11737 Protein of unknown function (DUF3300) E2R47_19795 PF07992 Pyridine nucleotide-disulphide oxidoreductase E2R47_19795 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain E2R47_19800 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) E2R47_19800 PF02817 e3 binding domain E2R47_19800 PF00364 Biotin-requiring enzyme E2R47_19805 PF17831 Pyruvate dehydrogenase E1 component middle domain E2R47_19805 PF00456 Transketolase, thiamine diphosphate binding domain E2R47_19810 PF00392 Bacterial regulatory proteins, gntR family E2R47_19810 PF07729 FCD domain E2R47_19815 PF00324 Amino acid permease E2R47_19825 PF04616 Glycosyl hydrolases family 43 E2R47_19825 PF05270 Alpha-L-arabinofuranosidase B (ABFB) domain E2R47_19830 PF17113 Regulatory signalling modulator protein AmpE E2R47_19835 PF01510 N-acetylmuramoyl-L-alanine amidase E2R47_19840 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain E2R47_19840 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain E2R47_19850 PF07963 Prokaryotic N-terminal methylation motif E2R47_19855 PF00437 Type II/IV secretion system protein E2R47_19855 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain E2R47_19860 PF00482 Type II secretion system (T2SS), protein F E2R47_19865 PF00478 IMP dehydrogenase / GMP reductase domain E2R47_19870 PF01121 Dephospho-CoA kinase E2R47_19875 PF07072 Cell division protein E2R47_19880 PF03884 DNA gyrase inhibitor YacG E2R47_19885 PF03466 LysR substrate binding domain E2R47_19885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2R47_19890 PF00248 Aldo/keto reductase family E2R47_19895 PF00293 NUDIX domain E2R47_19900 PF01043 SecA preprotein cross-linking domain E2R47_19900 PF02810 SEC-C motif E2R47_19900 PF07516 SecA Wing and Scaffold domain E2R47_19900 PF07517 SecA DEAD-like domain E2R47_19905 PF06558 Secretion monitor precursor protein (SecM) E2R47_19910 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase E2R47_19915 PF12327 FtsZ family, C-terminal domain E2R47_19915 PF00091 Tubulin/FtsZ family, GTPase domain E2R47_19920 PF02491 SHS2 domain inserted in FTSA E2R47_19925 PF08478 POTRA domain, FtsQ-type E2R47_19925 PF03799 Cell division protein FtsQ E2R47_19930 PF07478 D-ala D-ala ligase C-terminus E2R47_19930 PF01820 D-ala D-ala ligase N-terminus E2R47_19935 PF02875 Mur ligase family, glutamate ligase domain E2R47_19935 PF08245 Mur ligase middle domain E2R47_19935 PF01225 Mur ligase family, catalytic domain E2R47_19940 PF04101 Glycosyltransferase family 28 C-terminal domain E2R47_19940 PF03033 Glycosyltransferase family 28 N-terminal domain E2R47_19945 PF01098 Cell cycle protein E2R47_19950 PF08245 Mur ligase middle domain E2R47_19950 PF02875 Mur ligase family, glutamate ligase domain E2R47_19955 PF00953 Glycosyl transferase family 4 E2R47_19955 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 E2R47_19960 PF02875 Mur ligase family, glutamate ligase domain E2R47_19960 PF01225 Mur ligase family, catalytic domain E2R47_19960 PF08245 Mur ligase middle domain E2R47_19965 PF08245 Mur ligase middle domain E2R47_19965 PF02875 Mur ligase family, glutamate ligase domain E2R47_19965 PF01225 Mur ligase family, catalytic domain E2R47_19970 PF03717 Penicillin-binding Protein dimerisation domain E2R47_19970 PF00905 Penicillin binding protein transpeptidase domain E2R47_19975 PF04999 Cell division protein FtsL E2R47_19980 PF01795 MraW methylase family E2R47_19985 PF02381 MraZ protein, putative antitoxin-like E2R47_19990 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family E2R47_19990 PF00356 Bacterial regulatory proteins, lacI family E2R47_19995 PF10369 Small subunit of acetolactate synthase E2R47_20000 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain E2R47_20000 PF00205 Thiamine pyrophosphate enzyme, central domain E2R47_20000 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain E2R47_20005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2R47_20005 PF03466 LysR substrate binding domain E2R47_20010 PF08054 Leucine operon leader peptide E2R47_20015 PF00682 HMGL-like E2R47_20015 PF08502 LeuA allosteric (dimerisation) domain E2R47_20020 PF00180 Isocitrate/isopropylmalate dehydrogenase E2R47_20025 PF00330 Aconitase family (aconitate hydratase) E2R47_20030 PF00694 Aconitase C-terminal domain E2R47_20040 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle E2R47_20040 PF12793 Sugar transport-related sRNA regulator N-term E2R47_20050 PF00528 Binding-protein-dependent transport system inner membrane component E2R47_20055 PF00005 ABC transporter E2R47_20060 PF09335 SNARE associated Golgi protein E2R47_20065 PF02311 AraC-like ligand binding domain E2R47_20065 PF12833 Helix-turn-helix domain E2R47_20070 PF02782 FGGY family of carbohydrate kinases, C-terminal domain E2R47_20075 PF02610 L-arabinose isomerase E2R47_20075 PF11762 L-arabinose isomerase C-terminal domain E2R47_20080 PF00596 Class II Aldolase and Adducin N-terminal domain E2R47_20100 PF03104 DNA polymerase family B, exonuclease domain E2R47_20100 PF00136 DNA polymerase family B E2R47_20105 PF00271 Helicase conserved C-terminal domain E2R47_20105 PF12137 RNA polymerase recycling family C-terminal E2R47_20105 PF18337 RapA N-terminal Tudor like domain E2R47_20105 PF00176 SNF2 family N-terminal domain E2R47_20105 PF18339 RapA N-terminal Tudor like domain 1 E2R47_20110 PF00849 RNA pseudouridylate synthase E2R47_20115 PF00226 DnaJ domain E2R47_20115 PF05099 Tellurite resistance protein TerB E2R47_20120 PF03968 OstA-like protein E2R47_20120 PF04453 LPS transport system D E2R47_20125 PF09312 SurA N-terminal domain E2R47_20125 PF00639 PPIC-type PPIASE domain E2R47_20130 PF04166 Pyridoxal phosphate biosynthetic protein PdxA E2R47_20135 PF00398 Ribosomal RNA adenine dimethylase E2R47_20140 PF04379 ApaG domain E2R47_20145 PF00149 Calcineurin-like phosphoesterase E2R47_20150 PF00186 Dihydrofolate reductase E2R47_20155 PF02254 TrkA-N domain E2R47_20155 PF00999 Sodium/hydrogen exchanger family E2R47_20160 PF02525 Flavodoxin-like fold E2R47_20180 PF06004 Bacterial protein of unknown function (DUF903) E2R47_20185 PF00083 Sugar (and other) transporter E2R47_20195 PF01494 FAD binding domain E2R47_20200 PF01012 Electron transfer flavoprotein domain E2R47_20200 PF00766 Electron transfer flavoprotein FAD-binding domain E2R47_20205 PF01012 Electron transfer flavoprotein domain E2R47_20210 PF02028 BCCT, betaine/carnitine/choline family transporter E2R47_20215 PF00441 Acyl-CoA dehydrogenase, C-terminal domain E2R47_20215 PF02770 Acyl-CoA dehydrogenase, middle domain E2R47_20215 PF02771 Acyl-CoA dehydrogenase, N-terminal domain E2R47_20220 PF02515 CoA-transferase family III E2R47_20225 PF00501 AMP-binding enzyme E2R47_20225 PF13193 AMP-binding enzyme C-terminal domain E2R47_20230 PF00378 Enoyl-CoA hydratase/isomerase E2R47_20235 PF00132 Bacterial transferase hexapeptide (six repeats) E2R47_20240 PF07180 CaiF/GrlA transcriptional regulator E2R47_20245 PF02142 MGS-like domain E2R47_20245 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain E2R47_20245 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain E2R47_20250 PF00117 Glutamine amidotransferase class-I E2R47_20250 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain E2R47_20265 PF01113 Dihydrodipicolinate reductase, N-terminus E2R47_20265 PF05173 Dihydrodipicolinate reductase, C-terminus E2R47_20270 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase E2R47_20275 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase E2R47_20280 PF04223 Citrate lyase, alpha subunit (CitF) E2R47_20285 PF03328 HpcH/HpaI aldolase/citrate lyase family E2R47_20290 PF06857 Malonate decarboxylase delta subunit (MdcD) E2R47_20295 PF00583 Acetyltransferase (GNAT) family E2R47_20295 PF08218 Citrate lyase ligase C-terminal domain E2R47_20300 PF03390 2-hydroxycarboxylate transporter family E2R47_20305 PF04277 Oxaloacetate decarboxylase, gamma chain E2R47_20310 PF02436 Conserved carboxylase domain E2R47_20310 PF00682 HMGL-like E2R47_20310 PF00364 Biotin-requiring enzyme E2R47_20315 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit E2R47_20320 PF17203 Single cache domain 3 E2R47_20320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E2R47_20325 PF00072 Response regulator receiver domain E2R47_20325 PF12431 Transcriptional regulator E2R47_20330 PF01156 Inosine-uridine preferring nucleoside hydrolase E2R47_20340 PF02401 LytB protein E2R47_20345 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase E2R47_20350 PF01252 Signal peptidase (SPase) II E2R47_20355 PF06827 Zinc finger found in FPG and IleRS E2R47_20355 PF00133 tRNA synthetases class I (I, L, M and V) E2R47_20355 PF08264 Anticodon-binding domain of tRNA E2R47_20360 PF01687 Riboflavin kinase E2R47_20360 PF06574 FAD synthetase E2R47_20365 PF10837 Protein of unknown function (DUF2575) E2R47_20370 PF01649 Ribosomal protein S20 E2R47_20385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2R47_20385 PF03466 LysR substrate binding domain E2R47_20390 PF06965 Na+/H+ antiporter 1 E2R47_20405 PF04055 Radical SAM superfamily E2R47_20405 PF13186 Iron-sulfur cluster-binding domain E2R47_20410 PF16385 Domain of unknown function E2R47_20410 PF00884 Sulfatase E2R47_20420 PF00149 Calcineurin-like phosphoesterase E2R47_20420 PF02872 5'-nucleotidase, C-terminal domain E2R47_20435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2R47_20435 PF03466 LysR substrate binding domain E2R47_20455 PF02753 Pili assembly chaperone PapD, C-terminal domain E2R47_20455 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain E2R47_20460 PF16970 Type-1 fimbrial protein, A E2R47_20465 PF00419 Fimbrial protein E2R47_20470 PF00419 Fimbrial protein E2R47_20475 PF13954 PapC N-terminal domain E2R47_20475 PF13953 PapC C-terminal domain E2R47_20475 PF00577 Outer membrane usher protein E2R47_20480 PF02753 Pili assembly chaperone PapD, C-terminal domain E2R47_20480 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain E2R47_20485 PF00419 Fimbrial protein E2R47_20500 PF00704 Glycosyl hydrolases family 18 E2R47_20520 PF03466 LysR substrate binding domain E2R47_20520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2R47_20525 PF01556 DnaJ C terminal domain E2R47_20525 PF00684 DnaJ central domain E2R47_20525 PF00226 DnaJ domain E2R47_20530 PF00012 Hsp70 protein E2R47_20535 PF10807 Protein of unknown function (DUF2541) E2R47_20540 PF03981 Ubiquinol-cytochrome C chaperone E2R47_20540 PF13099 Domain of unknown function (DUF3944) E2R47_20545 PF01184 GPR1/FUN34/yaaH family E2R47_20550 PF00994 Probable molybdopterin binding domain E2R47_20555 PF00923 Transaldolase/Fructose-6-phosphate aldolase E2R47_20560 PF01235 Sodium:alanine symporter family E2R47_20565 PF03883 Peroxide stress protein YaaA E2R47_20570 PF00291 Pyridoxal-phosphate dependent enzyme E2R47_20570 PF14821 Threonine synthase N terminus E2R47_20575 PF00288 GHMP kinases N terminal domain E2R47_20575 PF08544 GHMP kinases C terminal E2R47_20580 PF00742 Homoserine dehydrogenase E2R47_20580 PF03447 Homoserine dehydrogenase, NAD binding domain E2R47_20580 PF01842 ACT domain E2R47_20580 PF00696 Amino acid kinase family E2R47_20580 PF13840 ACT domain E2R47_20585 PF08254 Threonine leader peptide E2R47_20590 PF00588 SpoU rRNA Methylase family E2R47_20600 PF00486 Transcriptional regulatory protein, C terminal E2R47_20600 PF00072 Response regulator receiver domain E2R47_20610 PF15977 Winged helix-turn-helix DNA binding E2R47_20620 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain E2R47_20620 PF02753 Pili assembly chaperone PapD, C-terminal domain E2R47_20625 PF13953 PapC C-terminal domain E2R47_20625 PF00577 Outer membrane usher protein E2R47_20625 PF13954 PapC N-terminal domain E2R47_20640 PF06123 Inner membrane protein CreD E2R47_20645 PF00672 HAMP domain E2R47_20645 PF00512 His Kinase A (phospho-acceptor) domain E2R47_20645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E2R47_20650 PF00072 Response regulator receiver domain E2R47_20650 PF00486 Transcriptional regulatory protein, C terminal E2R47_20655 PF05981 CreA protein E2R47_20660 PF06445 GyrI-like small molecule binding domain E2R47_20660 PF12833 Helix-turn-helix domain E2R47_20665 PF00300 Histidine phosphatase superfamily (branch 1) E2R47_20670 PF01931 Protein of unknown function DUF84 E2R47_20680 PF01371 Trp repressor protein E2R47_20685 PF14718 Soluble lytic murein transglycosylase L domain E2R47_20685 PF01464 Transglycosylase SLT domain E2R47_20690 PF12848 ABC transporter E2R47_20690 PF00005 ABC transporter E2R47_20695 PF13521 AAA domain E2R47_20695 PF01381 Helix-turn-helix E2R47_20700 PF18073 Rubredoxin metal binding domain E2R47_20705 PF18429 Domain of unknown function (DUF5609) E2R47_20715 PF10144 Bacterial virulence factor haemolysin E2R47_20720 PF03099 Biotin/lipoate A/B protein ligase family E2R47_20720 PF10437 Bacterial lipoate protein ligase C-terminus E2R47_20730 PF01048 Phosphorylase superfamily E2R47_20735 PF01676 Metalloenzyme superfamily E2R47_20740 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain E2R47_20740 PF00591 Glycosyl transferase family, a/b domain E2R47_20740 PF02885 Glycosyl transferase family, helical bundle domain E2R47_20745 PF01791 DeoC/LacD family aldolase E2R47_20750 PF11230 Protein of unknown function (DUF3029) E2R47_20755 PF04055 Radical SAM superfamily E2R47_20760 PF01026 TatD related DNase E2R47_20765 PF01734 Patatin-like phospholipase E2R47_20770 PF07043 Protein of unknown function (DUF1328) E2R47_20775 PF04972 BON domain E2R47_20780 PF03144 Elongation factor Tu domain 2 E2R47_20780 PF16658 Class II release factor RF3, C-terminal domain E2R47_20780 PF00009 Elongation factor Tu GTP binding domain E2R47_20785 PF13419 Haloacid dehalogenase-like hydrolase E2R47_20790 PF00583 Acetyltransferase (GNAT) family E2R47_20795 PF03603 DNA polymerase III psi subunit E2R47_20800 PF08468 Methyltransferase small domain N-terminal E2R47_20800 PF05175 Methyltransferase small domain E2R47_20820 PF07256 Protein of unknown function (DUF1435) E2R47_20825 PF05230 MASE2 domain E2R47_20825 PF00990 Diguanylate cyclase, GGDEF domain E2R47_20830 PF11575 FhuF 2Fe-2S C-terminal domain E2R47_20830 PF06276 Ferric iron reductase FhuF-like transporter E2R47_20835 PF04073 Aminoacyl-tRNA editing domain E2R47_20840 PF00196 Bacterial regulatory proteins, luxR family E2R47_20845 PF00196 Bacterial regulatory proteins, luxR family E2R47_20850 PF06738 Putative threonine/serine exporter E2R47_20855 PF12821 Threonine/Serine exporter, ThrE E2R47_20860 PF17948 DnaT DNA-binding domain E2R47_20865 PF01695 IstB-like ATP binding protein E2R47_20870 PF10696 Protein of unknown function (DUF2501) E2R47_20875 PF00884 Sulfatase E2R47_20880 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E2R47_20880 PF02203 Tar ligand binding domain homologue E2R47_20880 PF00672 HAMP domain E2R47_20885 PF02554 Carbon starvation protein CstA E2R47_20885 PF13722 5TM C-terminal transporter carbon starvation CstA E2R47_20890 PF04328 Selenoprotein, putative E2R47_20895 PF07683 Cobalamin synthesis protein cobW C-terminal domain E2R47_20895 PF02492 CobW/HypB/UreG, nucleotide-binding domain E2R47_20900 PF12833 Helix-turn-helix domain E2R47_20900 PF02311 AraC-like ligand binding domain E2R47_20905 PF01810 LysE type translocator E2R47_20925 PF00171 Aldehyde dehydrogenase family E2R47_20930 PF04754 Putative transposase, YhgA-like E2R47_20935 PF07690 Major Facilitator Superfamily E2R47_20940 PF04286 Protein of unknown function (DUF445) E2R47_20945 PF06779 Uncharacterised MFS-type transporter YbfB E2R47_20950 PF07670 Nucleoside recognition E2R47_20955 PF07670 Nucleoside recognition E2R47_20960 PF01979 Amidohydrolase family E2R47_20965 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2R47_20965 PF03466 LysR substrate binding domain E2R47_20970 PF01177 Asp/Glu/Hydantoin racemase E2R47_20980 PF00579 tRNA synthetases class I (W and Y) E2R47_20985 PF07729 FCD domain E2R47_20985 PF00392 Bacterial regulatory proteins, gntR family E2R47_20990 PF01738 Dienelactone hydrolase family E2R47_20995 PF03625 Domain of unknown function DUF302 E2R47_20995 PF02537 CrcB-like protein, Camphor Resistance (CrcB) E2R47_21020 PF09857 Putative toxin of bacterial toxin-antitoxin pair E2R47_21025 PF13847 Methyltransferase domain E2R47_21030 PF01709 Transcriptional regulator E2R47_21040 PF03979 Sigma-70 factor, region 1.1 E2R47_21040 PF04539 Sigma-70 region 3 E2R47_21040 PF00140 Sigma-70 factor, region 1.2 E2R47_21040 PF04545 Sigma-70, region 4 E2R47_21040 PF04542 Sigma-70 region 2 E2R47_21190 PF00589 Phage integrase family E2R47_21190 PF13356 Arm DNA-binding domain E2R47_21200 PF08240 Alcohol dehydrogenase GroES-like domain E2R47_21200 PF00107 Zinc-binding dehydrogenase E2R47_21205 PF01202 Shikimate kinase E2R47_21210 PF00107 Zinc-binding dehydrogenase E2R47_21210 PF08240 Alcohol dehydrogenase GroES-like domain E2R47_21215 PF00106 short chain dehydrogenase E2R47_21220 PF02447 GntP family permease E2R47_21225 PF00356 Bacterial regulatory proteins, lacI family E2R47_21230 PF03739 Lipopolysaccharide export system permease LptF/LptG E2R47_21235 PF03739 Lipopolysaccharide export system permease LptF/LptG E2R47_21245 PF02789 Cytosol aminopeptidase family, N-terminal domain E2R47_21245 PF00883 Cytosol aminopeptidase family, catalytic domain E2R47_21250 PF04364 DNA polymerase III chi subunit, HolC E2R47_21255 PF00133 tRNA synthetases class I (I, L, M and V) E2R47_21255 PF08264 Anticodon-binding domain of tRNA E2R47_21255 PF10458 Valyl tRNA synthetase tRNA binding arm E2R47_21260 PF05987 Bacterial protein of unknown function (DUF898) E2R47_21265 PF00583 Acetyltransferase (GNAT) family E2R47_21275 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) E2R47_21280 PF06877 Regulator of ribonuclease activity B E2R47_21285 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain E2R47_21285 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain E2R47_21290 PF04074 YhcH/YjgK/YiaL E2R47_21305 PF00696 Amino acid kinase family E2R47_21310 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain E2R47_21310 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain E2R47_21315 PF03606 C4-dicarboxylate anaerobic carrier E2R47_21320 PF01316 Arginine repressor, DNA binding domain E2R47_21320 PF02863 Arginine repressor, C-terminal domain E2R47_21330 PF08052 PyrBI operon leader peptide E2R47_21335 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain E2R47_21335 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain E2R47_21340 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain E2R47_21340 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain E2R47_21345 PF01042 Endoribonuclease L-PSP E2R47_21355 PF17059 MgtA leader peptide E2R47_21360 PF00356 Bacterial regulatory proteins, lacI family E2R47_21365 PF00367 phosphotransferase system, EIIB E2R47_21365 PF02378 Phosphotransferase system, EIIC E2R47_21370 PF11941 Domain of unknown function (DUF3459) E2R47_21370 PF00128 Alpha amylase, catalytic domain E2R47_21375 PF03477 ATP cone domain E2R47_21375 PF13597 Anaerobic ribonucleoside-triphosphate reductase E2R47_21385 PF05016 ParE toxin of type II toxin-antitoxin system, parDE E2R47_21390 PF04221 RelB antitoxin E2R47_21395 PF08279 HTH domain E2R47_21395 PF00874 PRD domain E2R47_21395 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 E2R47_21395 PF05043 Mga helix-turn-helix domain E2R47_21400 PF07071 KDGP aldolase E2R47_21405 PF03841 L-seryl-tRNA selenium transferase E2R47_21410 PF01979 Amidohydrolase family E2R47_21440 PF07361 Cytochrome b562 E2R47_21445 PF01523 Putative modulator of DNA gyrase E2R47_21450 PF04751 Protein of unknown function (DUF615) E2R47_21455 PF01261 Xylose isomerase-like TIM barrel E2R47_21465 PF07690 Major Facilitator Superfamily E2R47_21470 PF02894 Oxidoreductase family, C-terminal alpha/beta domain E2R47_21470 PF01408 Oxidoreductase family, NAD-binding Rossmann fold E2R47_21475 PF00205 Thiamine pyrophosphate enzyme, central domain E2R47_21475 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain E2R47_21475 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain E2R47_21480 PF00294 pfkB family carbohydrate kinase E2R47_21485 PF07690 Major Facilitator Superfamily E2R47_21490 PF01261 Xylose isomerase-like TIM barrel E2R47_21495 PF17189 Glycosyl hydrolase family 30 beta sandwich domain E2R47_21500 PF01408 Oxidoreductase family, NAD-binding Rossmann fold E2R47_21500 PF02894 Oxidoreductase family, C-terminal alpha/beta domain E2R47_21505 PF01261 Xylose isomerase-like TIM barrel E2R47_21520 PF00171 Aldehyde dehydrogenase family E2R47_21525 PF04962 KduI/IolB family E2R47_21530 PF00083 Sugar (and other) transporter E2R47_21540 PF00083 Sugar (and other) transporter E2R47_21545 PF01380 SIS domain E2R47_21545 PF01418 Helix-turn-helix domain, rpiR family E2R47_21545 PF02685 Glucokinase E2R47_21555 PF08245 Mur ligase middle domain E2R47_21555 PF02875 Mur ligase family, glutamate ligase domain E2R47_21555 PF01225 Mur ligase family, catalytic domain E2R47_21560 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain E2R47_21565 PF00719 Inorganic pyrophosphatase E2R47_21570 PF01979 Amidohydrolase family E2R47_21575 PF07690 Major Facilitator Superfamily E2R47_21580 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like E2R47_21585 PF04357 TamB, inner membrane protein subunit of TAM complex E2R47_21590 PF07244 Surface antigen variable number repeat E2R47_21590 PF17243 POTRA domain TamA domain 1 E2R47_21590 PF01103 Surface antigen E2R47_21595 PF01625 Peptide methionine sulfoxide reductase E2R47_21600 PF01595 Cyclin M transmembrane N-terminal domain E2R47_21600 PF03471 Transporter associated domain E2R47_21600 PF00571 CBS domain E2R47_21605 PF06526 Protein of unknown function (DUF1107) E2R47_21610 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) E2R47_21615 PF00459 Inositol monophosphatase family E2R47_21625 PF02872 5'-nucleotidase, C-terminal domain E2R47_21625 PF00149 Calcineurin-like phosphoesterase E2R47_21630 PF01638 HxlR-like helix-turn-helix E2R47_21635 PF05368 NmrA-like family E2R47_21640 PF00892 EamA-like transporter family E2R47_21645 PF04405 Domain of Unknown function (DUF542) E2R47_21645 PF01814 Hemerythrin HHE cation binding domain E2R47_21650 PF00324 Amino acid permease E2R47_21655 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase E2R47_21655 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase E2R47_21660 PF08525 Opacity-associated protein A N-terminal motif E2R47_21660 PF04225 Opacity-associated protein A LysM-like domain E2R47_21670 PF03948 Ribosomal protein L9, C-terminal domain E2R47_21670 PF01281 Ribosomal protein L9, N-terminal domain E2R47_21675 PF01084 Ribosomal protein S18 E2R47_21680 PF00436 Single-strand binding protein family E2R47_21685 PF01250 Ribosomal protein S6 E2R47_21690 PF07338 Protein of unknown function (DUF1471) E2R47_21695 PF07274 Protein of unknown function (DUF1440) E2R47_21700 PF00596 Class II Aldolase and Adducin N-terminal domain E2R47_21705 PF01261 Xylose isomerase-like TIM barrel E2R47_21710 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family E2R47_21715 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 E2R47_21720 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit E2R47_21725 PF03611 PTS system sugar-specific permease component E2R47_21735 PF08220 DeoR-like helix-turn-helix domain E2R47_21735 PF00455 DeoR C terminal sensor domain E2R47_21740 PF00326 Prolyl oligopeptidase family E2R47_21745 PF07338 Protein of unknown function (DUF1471) E2R47_21750 PF07338 Protein of unknown function (DUF1471) E2R47_21755 PF18158 Adaptive response protein AidB N-terminal domain E2R47_21755 PF00441 Acyl-CoA dehydrogenase, C-terminal domain E2R47_21755 PF02770 Acyl-CoA dehydrogenase, middle domain E2R47_21760 PF03738 Glutathionylspermidine synthase preATP-grasp E2R47_21765 PF06693 Protein of unknown function (DUF1190) E2R47_21770 PF03994 Domain of Unknown Function (DUF350) E2R47_21775 PF10679 Protein of unknown function (DUF2491) E2R47_21780 PF04012 PspA/IM30 family E2R47_21785 PF09938 Uncharacterized protein conserved in bacteria (DUF2170) E2R47_21790 PF00588 SpoU rRNA Methylase family E2R47_21790 PF08032 RNA 2'-O ribose methyltransferase substrate binding E2R47_21795 PF00575 S1 RNA binding domain E2R47_21795 PF00773 RNB domain E2R47_21795 PF08206 Ribonuclease B OB domain E2R47_21795 PF08461 Ribonuclease R winged-helix domain E2R47_21795 PF17876 Cold shock domain E2R47_21800 PF02082 Transcriptional regulator E2R47_21810 PF00709 Adenylosuccinate synthetase E2R47_21815 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) E2R47_21820 PF01145 SPFH domain / Band 7 family E2R47_21825 PF12221 Bacterial membrane protein N terminal E2R47_21825 PF01145 SPFH domain / Band 7 family E2R47_21830 PF16360 GTP-binding GTPase Middle Region E2R47_21830 PF13167 GTP-binding GTPase N-terminal E2R47_21830 PF01926 50S ribosome-binding GTPase E2R47_21835 PF17209 Hfq protein E2R47_21845 PF08676 MutL C terminal dimerisation domain E2R47_21845 PF01119 DNA mismatch repair protein, C-terminal domain E2R47_21850 PF01520 N-acetylmuramoyl-L-alanine amidase E2R47_21855 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE E2R47_21860 PF01256 Carbohydrate kinase E2R47_21860 PF03853 YjeF-related protein N-terminus E2R47_21865 PF08331 Domain of unknown function (DUF1730) E2R47_21885 PF00497 Bacterial extracellular solute-binding proteins, family 3 E2R47_21890 PF00929 Exonuclease E2R47_21895 PF03193 RsgA GTPase E2R47_21900 PF02666 Phosphatidylserine decarboxylase E2R47_21905 PF12794 Mechanosensitive ion channel inner membrane domain 1 E2R47_21905 PF12795 Mechanosensitive ion channel porin domain E2R47_21905 PF00924 Mechanosensitive ion channel E2R47_21910 PF13520 Amino acid permease E2R47_21915 PF00152 tRNA synthetases class II (D, K and N) E2R47_21920 PF00890 FAD binding domain E2R47_21920 PF02910 Fumarate reductase flavoprotein C-term E2R47_21925 PF13085 2Fe-2S iron-sulfur cluster binding domain E2R47_21925 PF13183 4Fe-4S dicluster domain E2R47_21930 PF02300 Fumarate reductase subunit C E2R47_21935 PF02313 Fumarate reductase subunit D E2R47_21940 PF08212 Lipocalin-like domain E2R47_21945 PF00893 Small Multidrug Resistance protein E2R47_21950 PF00196 Bacterial regulatory proteins, luxR family E2R47_21955 PF08085 Entericidin EcnA/B family E2R47_21965 PF08085 Entericidin EcnA/B family E2R47_21970 PF09285 Elongation factor P, C-terminal E2R47_21970 PF08207 Elongation factor P (EF-P) KOW-like domain E2R47_21970 PF01132 Elongation factor P (EF-P) OB domain E2R47_21975 PF04055 Radical SAM superfamily E2R47_21980 PF15922 YjeJ-like E2R47_21985 PF13698 Domain of unknown function (DUF4156) E2R47_21990 PF00118 TCP-1/cpn60 chaperonin family E2R47_21995 PF00166 Chaperonin 10 Kd subunit E2R47_22000 PF13520 Amino acid permease E2R47_22005 PF04186 FxsA cytoplasmic membrane protein E2R47_22010 PF00206 Lyase E2R47_22010 PF10415 Fumarase C C-terminus E2R47_22015 PF03605 Anaerobic c4-dicarboxylate membrane transporter E2R47_22020 PF03091 CutA1 divalent ion tolerance protein E2R47_22025 PF11412 Disulphide bond corrector protein DsbC E2R47_22025 PF02683 Cytochrome C biogenesis protein transmembrane region E2R47_22050 PF00158 Sigma-54 interaction domain E2R47_22050 PF03610 PTS system fructose IIA component E2R47_22050 PF00874 PRD domain E2R47_22055 PF00834 Ribulose-phosphate 3 epimerase family E2R47_22060 PF00107 Zinc-binding dehydrogenase E2R47_22060 PF08240 Alcohol dehydrogenase GroES-like domain E2R47_22065 PF01380 SIS domain E2R47_22070 PF08240 Alcohol dehydrogenase GroES-like domain E2R47_22070 PF00107 Zinc-binding dehydrogenase E2R47_22075 PF03613 PTS system mannose/fructose/sorbose family IID component E2R47_22085 PF03830 PTS system sorbose subfamily IIB component E2R47_22090 PF03830 PTS system sorbose subfamily IIB component E2R47_22090 PF03610 PTS system fructose IIA component E2R47_22100 PF01569 PAP2 superfamily E2R47_22130 PF12833 Helix-turn-helix domain E2R47_22135 PF00196 Bacterial regulatory proteins, luxR family E2R47_22135 PF00072 Response regulator receiver domain E2R47_22140 PF00664 ABC transporter transmembrane region E2R47_22140 PF00005 ABC transporter E2R47_22150 PF06977 SdiA-regulated E2R47_22160 PF02613 Nitrate reductase delta subunit E2R47_22165 PF04976 DMSO reductase anchor subunit (DmsC) E2R47_22170 PF12800 4Fe-4S binding domain E2R47_22170 PF13247 4Fe-4S dicluster domain E2R47_22175 PF00384 Molybdopterin oxidoreductase E2R47_22175 PF04879 Molybdopterin oxidoreductase Fe4S4 domain E2R47_22175 PF01568 Molydopterin dinucleotide binding domain E2R47_22180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E2R47_22180 PF17203 Single cache domain 3 E2R47_22180 PF00989 PAS fold E2R47_22180 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain E2R47_22185 PF00072 Response regulator receiver domain E2R47_22195 PF03605 Anaerobic c4-dicarboxylate membrane transporter E2R47_22200 PF05681 Fumarate hydratase (Fumerase) E2R47_22200 PF05683 Fumarase C-terminus E2R47_22210 PF02056 Family 4 glycosyl hydrolase E2R47_22210 PF11975 Family 4 glycosyl hydrolase C-terminal domain E2R47_22215 PF12833 Helix-turn-helix domain E2R47_22220 PF01276 Orn/Lys/Arg decarboxylase, major domain E2R47_22220 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain E2R47_22220 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain E2R47_22225 PF12833 Helix-turn-helix domain E2R47_22230 PF13520 Amino acid permease E2R47_22235 PF08019 Phosphoethanolamine transferase EptA/EptB E2R47_22235 PF00884 Sulfatase E2R47_22240 PF00486 Transcriptional regulatory protein, C terminal E2R47_22240 PF00072 Response regulator receiver domain E2R47_22245 PF00512 His Kinase A (phospho-acceptor) domain E2R47_22245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E2R47_22255 PF08946 Osmosensory transporter coiled coil E2R47_22255 PF00083 Sugar (and other) transporter E2R47_22260 PF08274 PhnA Zinc-Ribbon E2R47_22260 PF03831 PhnA domain E2R47_22265 PF06983 3-demethylubiquinone-9 3-methyltransferase E2R47_22270 PF00583 Acetyltransferase (GNAT) family E2R47_22285 PF08238 Sel1 repeat E2R47_22295 PF00375 Sodium:dicarboxylate symporter family E2R47_22305 PF03918 Cytochrome C biogenesis protein E2R47_22310 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal E2R47_22310 PF01578 Cytochrome C assembly protein E2R47_22315 PF03916 Polysulphide reductase, NrfD E2R47_22320 PF13247 4Fe-4S dicluster domain E2R47_22320 PF00037 4Fe-4S binding domain E2R47_22325 PF13435 Cytochrome c554 and c-prime E2R47_22325 PF09699 Doubled CXXCH motif (Paired_CXXCH_1) E2R47_22330 PF02335 Cytochrome c552 E2R47_22335 PF16177 Acetyl-coenzyme A synthetase N-terminus E2R47_22335 PF00501 AMP-binding enzyme E2R47_22335 PF13193 AMP-binding enzyme C-terminal domain E2R47_22340 PF04341 Protein of unknown function, DUF485 E2R47_22345 PF00474 Sodium:solute symporter family E2R47_22350 PF04172 LrgB-like family E2R47_22355 PF03788 LrgA family E2R47_22360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2R47_22360 PF03466 LysR substrate binding domain E2R47_22365 PF00999 Sodium/hydrogen exchanger family E2R47_22375 PF00860 Permease family E2R47_22385 PF09278 MerR, DNA binding E2R47_22385 PF00376 MerR family regulatory protein E2R47_22390 PF12833 Helix-turn-helix domain E2R47_22395 PF00563 EAL domain E2R47_22395 PF12792 CSS motif domain associated with EAL E2R47_22400 PF15940 Family of unknown function E2R47_22405 PF00005 ABC transporter E2R47_22405 PF00664 ABC transporter transmembrane region E2R47_22435 PF00436 Single-strand binding protein family E2R47_22445 PF17760 UvrA interaction domain E2R47_22445 PF17755 UvrA DNA-binding domain E2R47_22445 PF00005 ABC transporter E2R47_22460 PF04237 YjbR E2R47_22465 PF01894 Uncharacterised protein family UPF0047 E2R47_22470 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) E2R47_22475 PF00155 Aminotransferase class I and II E2R47_22480 PF01168 Alanine racemase, N-terminal domain E2R47_22480 PF00842 Alanine racemase, C-terminal domain E2R47_22485 PF00772 DnaB-like helicase N terminal domain E2R47_22485 PF03796 DnaB-like helicase C terminal domain E2R47_22490 PF08240 Alcohol dehydrogenase GroES-like domain E2R47_22490 PF00107 Zinc-binding dehydrogenase E2R47_22495 PF09583 Phage shock protein G (Phageshock_PspG) E2R47_22500 PF01207 Dihydrouridine synthase (Dus) E2R47_22510 PF01475 Ferric uptake regulator family E2R47_22515 PF05532 CsbD-like E2R47_22525 PF01554 MatE E2R47_22530 PF01726 LexA DNA binding domain E2R47_22530 PF00717 Peptidase S24-like E2R47_22535 PF01219 Prokaryotic diacylglycerol kinase E2R47_22540 PF01553 Acyltransferase E2R47_22545 PF01040 UbiA prenyltransferase family E2R47_22550 PF04345 Chorismate lyase E2R47_22555 PF07148 Maltose operon periplasmic protein precursor (MalM) E2R47_22560 PF02264 LamB porin E2R47_22565 PF17912 MalK OB fold domain E2R47_22565 PF00005 ABC transporter E2R47_22570 PF01547 Bacterial extracellular solute-binding protein E2R47_22575 PF00528 Binding-protein-dependent transport system inner membrane component E2R47_22575 PF14785 Maltose transport system permease protein MalF P2 domain E2R47_22580 PF00528 Binding-protein-dependent transport system inner membrane component E2R47_22585 PF06146 Phosphate-starvation-inducible E E2R47_22590 PF06082 Exopolysaccharide biosynthesis protein YbjH E2R47_22595 PF06251 Capsule biosynthesis GfcC E2R47_22600 PF11102 Group 4 capsule polysaccharide lipoprotein gfcB, YjbF E2R47_22610 PF00342 Phosphoglucose isomerase E2R47_22615 PF01842 ACT domain E2R47_22615 PF00696 Amino acid kinase family E2R47_22620 PF08765 Mor transcription activator family E2R47_22700 PF04138 GtrA-like protein E2R47_22705 PF00535 Glycosyl transferase family 2 E2R47_22730 PF08400 Prophage tail fibre N-terminal E2R47_22730 PF03335 Phage tail fibre repeat E2R47_22730 PF07484 Phage Tail Collar Domain E2R47_22755 PF01758 Sodium Bile acid symporter family E2R47_22760 PF11656 YjbD family (DUF3811) E2R47_22765 PF00849 RNA pseudouridylate synthase E2R47_22765 PF01479 S4 domain E2R47_22770 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) E2R47_22780 PF03575 Peptidase family S51 E2R47_22785 PF02690 Na+/Pi-cotransporter E2R47_22790 PF02310 B12 binding domain E2R47_22790 PF02607 B12 binding domain E2R47_22790 PF02965 Vitamin B12 dependent methionine synthase, activation domain E2R47_22790 PF00809 Pterin binding enzyme E2R47_22790 PF02574 Homocysteine S-methyltransferase E2R47_22795 PF01614 Bacterial transcriptional regulator E2R47_22795 PF09339 IclR helix-turn-helix domain E2R47_22805 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) E2R47_22810 PF00463 Isocitrate lyase family E2R47_22815 PF01274 Malate synthase E2R47_22820 PF04204 Homoserine O-succinyltransferase E2R47_22825 PF13673 Acetyltransferase (GNAT) domain E2R47_22850 PF02142 MGS-like domain E2R47_22850 PF01808 AICARFT/IMPCHase bienzyme E2R47_22855 PF02843 Phosphoribosylglycinamide synthetase, C domain E2R47_22855 PF02844 Phosphoribosylglycinamide synthetase, N domain E2R47_22855 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain E2R47_22860 PF02954 Bacterial regulatory protein, Fis family E2R47_22860 PF00072 Response regulator receiver domain E2R47_22860 PF00158 Sigma-54 interaction domain E2R47_22865 PF00512 His Kinase A (phospho-acceptor) domain E2R47_22865 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E2R47_22870 PF13801 Heavy-metal resistance E2R47_22875 PF07356 Protein of unknown function (DUF1481) E2R47_22880 PF00216 Bacterial DNA-binding protein E2R47_22885 PF04222 Protein of unknown function (DUF416) E2R47_22890 PF04493 Endonuclease V E2R47_22895 PF01208 Uroporphyrinogen decarboxylase (URO-D) E2R47_22900 PF00293 NUDIX domain E2R47_22900 PF09297 NADH pyrophosphatase zinc ribbon domain E2R47_22905 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ E2R47_22910 PF13667 ThiC-associated domain E2R47_22910 PF01964 Radical SAM ThiC family E2R47_22915 PF02581 Thiamine monophosphate synthase E2R47_22920 PF00899 ThiF family E2R47_22925 PF02597 ThiS family E2R47_22930 PF05690 Thiazole biosynthesis protein ThiG E2R47_22935 PF06968 Biotin and Thiamin Synthesis associated domain E2R47_22935 PF04055 Radical SAM superfamily E2R47_22960 PF00623 RNA polymerase Rpb1, domain 2 E2R47_22960 PF05000 RNA polymerase Rpb1, domain 4 E2R47_22960 PF04983 RNA polymerase Rpb1, domain 3 E2R47_22960 PF04998 RNA polymerase Rpb1, domain 5 E2R47_22960 PF04997 RNA polymerase Rpb1, domain 1 E2R47_22965 PF04565 RNA polymerase Rpb2, domain 3 E2R47_22965 PF04560 RNA polymerase Rpb2, domain 7 E2R47_22965 PF04563 RNA polymerase beta subunit E2R47_22965 PF00562 RNA polymerase Rpb2, domain 6 E2R47_22965 PF04561 RNA polymerase Rpb2, domain 2 E2R47_22965 PF10385 RNA polymerase beta subunit external 1 domain E2R47_22970 PF16320 Ribosomal protein L7/L12 dimerisation domain E2R47_22970 PF00542 Ribosomal protein L7/L12 C-terminal domain E2R47_22975 PF00466 Ribosomal protein L10 E2R47_22980 PF00687 Ribosomal protein L1p/L10e family E2R47_22985 PF03946 Ribosomal protein L11, N-terminal domain E2R47_22985 PF00298 Ribosomal protein L11, RNA binding domain E2R47_22990 PF02357 Transcription termination factor nusG E2R47_22990 PF00467 KOW motif E2R47_22995 PF00584 SecE/Sec61-gamma subunits of protein translocation complex E2R47_23000 PF00009 Elongation factor Tu GTP binding domain E2R47_23000 PF03144 Elongation factor Tu domain 2 E2R47_23000 PF03143 Elongation factor Tu C-terminal domain E2R47_23030 PF00485 Phosphoribulokinase / Uridine kinase family E2R47_23035 PF03099 Biotin/lipoate A/B protein ligase family E2R47_23035 PF08279 HTH domain E2R47_23035 PF02237 Biotin protein ligase C terminal domain E2R47_23040 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain E2R47_23040 PF01565 FAD binding domain E2R47_23075 PF01177 Asp/Glu/Hydantoin racemase E2R47_23080 PF00593 TonB dependent receptor E2R47_23080 PF07715 TonB-dependent Receptor Plug Domain E2R47_23085 PF05958 tRNA (Uracil-5-)-methyltransferase E2R47_23090 PF07226 Protein of unknown function (DUF1422) E2R47_23095 PF00440 Bacterial regulatory proteins, tetR family E2R47_23100 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain E2R47_23100 PF07992 Pyridine nucleotide-disulphide oxidoreductase E2R47_23105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2R47_23105 PF03466 LysR substrate binding domain E2R47_23115 PF00206 Lyase E2R47_23115 PF14698 Argininosuccinate lyase C-terminal E2R47_23120 PF00696 Amino acid kinase family E2R47_23125 PF02774 Semialdehyde dehydrogenase, dimerisation domain E2R47_23125 PF01118 Semialdehyde dehydrogenase, NAD binding domain E2R47_23130 PF01546 Peptidase family M20/M25/M40 E2R47_23130 PF07687 Peptidase dimerisation domain E2R47_23135 PF00311 Phosphoenolpyruvate carboxylase E2R47_23140 PF00884 Sulfatase E2R47_23145 PF12833 Helix-turn-helix domain E2R47_23150 PF00923 Transaldolase/Fructose-6-phosphate aldolase E2R47_23155 PF00465 Iron-containing alcohol dehydrogenase E2R47_23160 PF06940 Domain of unknown function (DUF1287) E2R47_23165 PF00141 Peroxidase E2R47_23170 PF02219 Methylenetetrahydrofolate reductase E2R47_23175 PF17936 Bacterial Ig domain E2R47_23175 PF00149 Calcineurin-like phosphoesterase E2R47_23175 PF02872 5'-nucleotidase, C-terminal domain E2R47_23190 PF05552 Conserved TM helix E2R47_23190 PF00924 Mechanosensitive ion channel E2R47_23195 PF00696 Amino acid kinase family E2R47_23195 PF00742 Homoserine dehydrogenase E2R47_23195 PF03447 Homoserine dehydrogenase, NAD binding domain E2R47_23200 PF01053 Cys/Met metabolism PLP-dependent enzyme E2R47_23205 PF01340 Met Apo-repressor, MetJ E2R47_23210 PF05935 Arylsulfotransferase (ASST) E2R47_23210 PF17425 Arylsulfotransferase Ig-like domain E2R47_23220 PF01197 Ribosomal protein L31 E2R47_23225 PF00270 DEAD/DEAH box helicase E2R47_23225 PF00271 Helicase conserved C-terminal domain E2R47_23225 PF17764 3′ DNA-binding domain (3′BD) E2R47_23225 PF18074 Primosomal protein N C-terminal domain E2R47_23225 PF18319 PriA DNA helicase Cys-rich region (CRR) domain E2R47_23230 PF00356 Bacterial regulatory proteins, lacI family E2R47_23235 PF05036 Sporulation related domain E2R47_23240 PF00227 Proteasome subunit E2R47_23245 PF00004 ATPase family associated with various cellular activities (AAA) E2R47_23245 PF10431 C-terminal, D2-small domain, of ClpB protein E2R47_23245 PF07724 AAA domain (Cdc48 subfamily) E2R47_23250 PF01040 UbiA prenyltransferase family E2R47_23255 PF03737 Aldolase/RraA E2R47_23260 PF06005 Cell division protein ZapB E2R47_23265 PF00230 Major intrinsic protein E2R47_23270 PF02782 FGGY family of carbohydrate kinases, C-terminal domain E2R47_23270 PF00370 FGGY family of carbohydrate kinases, N-terminal domain E2R47_23275 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded E2R47_23280 PF00970 Oxidoreductase FAD-binding domain E2R47_23280 PF00175 Oxidoreductase NAD-binding domain E2R47_23285 PF05656 Protein of unknown function (DUF805) E2R47_23290 PF07305 Protein of unknown function (DUF1454) E2R47_23295 PF00121 Triosephosphate isomerase E2R47_23300 PF00834 Ribulose-phosphate 3 epimerase family E2R47_23305 PF03992 Antibiotic biosynthesis monooxygenase E2R47_23310 PF01791 DeoC/LacD family aldolase E2R47_23315 PF13407 Periplasmic binding protein domain E2R47_23320 PF02653 Branched-chain amino acid transport system / permease component E2R47_23325 PF02653 Branched-chain amino acid transport system / permease component E2R47_23330 PF00005 ABC transporter E2R47_23335 PF04198 Putative sugar-binding domain E2R47_23340 PF02782 FGGY family of carbohydrate kinases, C-terminal domain E2R47_23340 PF00370 FGGY family of carbohydrate kinases, N-terminal domain E2R47_23350 PF02611 CDP-diacylglycerol pyrophosphatase E2R47_23360 PF00392 Bacterial regulatory proteins, gntR family E2R47_23360 PF00155 Aminotransferase class I and II E2R47_23370 PF00294 pfkB family carbohydrate kinase E2R47_23380 PF02611 CDP-diacylglycerol pyrophosphatase E2R47_23390 PF00365 Phosphofructokinase E2R47_23395 PF01545 Cation efflux family E2R47_23395 PF16916 Dimerisation domain of Zinc Transporter E2R47_23400 PF07813 LTXXQ motif family protein E2R47_23405 PF00072 Response regulator receiver domain E2R47_23405 PF00486 Transcriptional regulatory protein, C terminal E2R47_23410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E2R47_23410 PF00672 HAMP domain E2R47_23410 PF16527 Two-component sensor protein CpxA, periplasmic domain E2R47_23410 PF00512 His Kinase A (phospho-acceptor) domain E2R47_23420 PF03473 MOSC domain E2R47_23420 PF03475 3-alpha domain E2R47_23425 PF02777 Iron/manganese superoxide dismutases, C-terminal domain E2R47_23425 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain E2R47_23430 PF03480 Bacterial extracellular solute-binding protein, family 7 E2R47_23435 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component E2R47_23440 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component E2R47_23445 PF06178 Oligogalacturonate-specific porin protein (KdgM) E2R47_23450 PF06379 L-rhamnose-proton symport protein (RhaT) E2R47_23455 PF02311 AraC-like ligand binding domain E2R47_23455 PF12833 Helix-turn-helix domain E2R47_23460 PF02311 AraC-like ligand binding domain E2R47_23460 PF12833 Helix-turn-helix domain E2R47_23465 PF02782 FGGY family of carbohydrate kinases, C-terminal domain E2R47_23465 PF00370 FGGY family of carbohydrate kinases, N-terminal domain E2R47_23470 PF06134 L-rhamnose isomerase (RhaA) E2R47_23475 PF00596 Class II Aldolase and Adducin N-terminal domain E2R47_23480 PF00465 Iron-containing alcohol dehydrogenase E2R47_23485 PF05336 L-rhamnose mutarotase E2R47_23495 PF03591 AzlC protein E2R47_23505 PF12889 Protein of unknown function (DUF3829) E2R47_23510 PF12889 Protein of unknown function (DUF3829) E2R47_23515 PF02634 FdhD/NarQ family E2R47_23520 PF04879 Molybdopterin oxidoreductase Fe4S4 domain E2R47_23520 PF00384 Molybdopterin oxidoreductase E2R47_23520 PF01568 Molydopterin dinucleotide binding domain E2R47_23525 PF01568 Molydopterin dinucleotide binding domain E2R47_23525 PF00384 Molybdopterin oxidoreductase E2R47_23525 PF04879 Molybdopterin oxidoreductase Fe4S4 domain E2R47_23530 PF13247 4Fe-4S dicluster domain E2R47_23530 PF09163 Formate dehydrogenase N, transmembrane E2R47_23535 PF01292 Prokaryotic cytochrome b561 E2R47_23540 PF04216 Protein involved in formate dehydrogenase formation E2R47_23550 PF06296 RelE toxin of RelE / RelB toxin-antitoxin system E2R47_23555 PF07859 alpha/beta hydrolase fold E2R47_23560 PF09907 HigB_toxin, RelE-like toxic component of a toxin-antitoxin system E2R47_23565 PF01381 Helix-turn-helix E2R47_23570 PF09500 Putative thioesterase (yiiD_Cterm) E2R47_23570 PF00583 Acetyltransferase (GNAT) family E2R47_23575 PF02580 D-Tyr-tRNA(Tyr) deacylase E2R47_23580 PF03631 Virulence factor BrkB E2R47_23585 PF13419 Haloacid dehalogenase-like hydrolase E2R47_23590 PF00455 DeoR C terminal sensor domain E2R47_23590 PF08220 DeoR-like helix-turn-helix domain E2R47_23595 PF00294 pfkB family carbohydrate kinase E2R47_23600 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase E2R47_23600 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase E2R47_23605 PF01791 DeoC/LacD family aldolase E2R47_23615 PF01263 Aldose 1-epimerase E2R47_23620 PF01055 Glycosyl hydrolases family 31 E2R47_23635 PF06178 Oligogalacturonate-specific porin protein (KdgM) E2R47_23655 PF04055 Radical SAM superfamily E2R47_23675 PF03951 Glutamine synthetase, beta-Grasp domain E2R47_23675 PF00120 Glutamine synthetase, catalytic domain E2R47_23685 PF00512 His Kinase A (phospho-acceptor) domain E2R47_23685 PF00989 PAS fold E2R47_23685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E2R47_23690 PF00158 Sigma-54 interaction domain E2R47_23690 PF02954 Bacterial regulatory protein, Fis family E2R47_23690 PF00072 Response regulator receiver domain E2R47_23700 PF06969 HemN C-terminal domain E2R47_23700 PF04055 Radical SAM superfamily E2R47_23705 PF04220 Der GTPase activator (YihI) E2R47_23715 PF01926 50S ribosome-binding GTPase E2R47_23725 PF01612 3'-5' exonuclease E2R47_23725 PF00476 DNA polymerase family A E2R47_23725 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain E2R47_23725 PF01367 5'-3' exonuclease, C-terminal SAM fold E2R47_23735 PF01553 Acyltransferase E2R47_23740 PF01323 DSBA-like thioredoxin domain E2R47_23745 PF01636 Phosphotransferase enzyme family E2R47_23750 PF06288 Protein of unknown function (DUF1040) E2R47_23755 PF12804 MobA-like NTP transferase domain E2R47_23760 PF03205 Molybdopterin guanine dinucleotide synthesis protein B E2R47_23790 PF12724 Flavodoxin domain E2R47_23795 PF02386 Cation transport protein E2R47_23800 PF01205 Uncharacterized protein family UPF0029 E2R47_23800 PF09186 Domain of unknown function (DUF1949) E2R47_23805 PF00557 Metallopeptidase family M24 E2R47_23810 PF00378 Enoyl-CoA hydratase/isomerase E2R47_23810 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain E2R47_23810 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain E2R47_23815 PF00108 Thiolase, N-terminal domain E2R47_23815 PF02803 Thiolase, C-terminal domain E2R47_23820 PF05935 Arylsulfotransferase (ASST) E2R47_23820 PF17425 Arylsulfotransferase Ig-like domain E2R47_23825 PF00970 Oxidoreductase FAD-binding domain E2R47_23825 PF00175 Oxidoreductase NAD-binding domain E2R47_23830 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase E2R47_23835 PF02357 Transcription termination factor nusG E2R47_23840 PF01026 TatD related DNase E2R47_23845 PF00902 Sec-independent protein translocase protein (TatC) E2R47_23855 PF02416 mttA/Hcf106 family E2R47_23860 PF03109 ABC1 family E2R47_23865 PF02036 SCP-2 sterol transfer family E2R47_23870 PF01209 ubiE/COQ5 methyltransferase family E2R47_23875 PF02646 RmuC family E2R47_23880 PF01048 Phosphorylase superfamily E2R47_23885 PF01738 Dienelactone hydrolase family E2R47_23890 PF04055 Radical SAM superfamily E2R47_23890 PF13186 Iron-sulfur cluster-binding domain E2R47_23900 PF08267 Cobalamin-independent synthase, N-terminal domain E2R47_23900 PF01717 Cobalamin-independent synthase, Catalytic domain E2R47_23905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2R47_23905 PF03466 LysR substrate binding domain E2R47_23910 PF00892 EamA-like transporter family E2R47_23920 PF12146 Serine aminopeptidase, S33 E2R47_23925 PF01810 LysE type translocator E2R47_23930 PF01810 LysE type translocator E2R47_23935 PF00271 Helicase conserved C-terminal domain E2R47_23935 PF09382 RQC domain E2R47_23935 PF00270 DEAD/DEAH box helicase E2R47_23935 PF00570 HRDC domain E2R47_23935 PF16124 RecQ zinc-binding E2R47_23940 PF02253 Phospholipase A1 E2R47_23945 PF03061 Thioesterase superfamily E2R47_23950 PF00892 EamA-like transporter family E2R47_23960 PF10947 Protein of unknown function (DUF2628) E2R47_23965 PF01544 CorA-like Mg2+ transporter protein E2R47_23975 PF00580 UvrD/REP helicase N-terminal domain E2R47_23975 PF13361 UvrD-like helicase C-terminal domain E2R47_23980 PF13419 Haloacid dehalogenase-like hydrolase E2R47_23985 PF02899 Phage integrase, N-terminal SAM-like domain E2R47_23985 PF00589 Phage integrase family E2R47_23990 PF04340 Protein of unknown function, DUF484 E2R47_23995 PF01678 Diaminopimelate epimerase E2R47_24000 PF13627 Prokaryotic lipoprotein-attachment site E2R47_24015 PF01491 Frataxin-like domain E2R47_24035 PF01295 Adenylate cyclase, class-I E2R47_24035 PF12633 Adenylate cyclase NT domain E2R47_24040 PF03900 Porphobilinogen deaminase, C-terminal domain E2R47_24040 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain E2R47_24045 PF02602 Uroporphyrinogen-III synthase HemD E2R47_24050 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase E2R47_24055 PF07719 Tetratricopeptide repeat E2R47_24055 PF07219 HemY protein N-terminus E2R47_24080 PF00324 Amino acid permease E2R47_24085 PF03808 Glycosyl transferase WecB/TagA/CpsF family E2R47_24090 PF06899 WzyE protein, O-antigen assembly polymerase E2R47_24095 PF07429 4-alpha-L-fucosyltransferase glycosyl transferase group 56 E2R47_24100 PF01943 Polysaccharide biosynthesis protein E2R47_24105 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family E2R47_24115 PF00483 Nucleotidyl transferase E2R47_24115 PF00483 Nucleotidyl transferase E2R47_24120 PF16363 GDP-mannose 4,6 dehydratase E2R47_24125 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain E2R47_24125 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain E2R47_24125 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain E2R47_24130 PF02350 UDP-N-acetylglucosamine 2-epimerase E2R47_24135 PF02706 Chain length determinant protein E2R47_24140 PF00953 Glycosyl transferase family 4 E2R47_24145 PF07498 Rho termination factor, N-terminal domain E2R47_24145 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain E2R47_24145 PF07497 Rho termination factor, RNA-binding domain E2R47_24155 PF00085 Thioredoxin E2R47_24160 PF00271 Helicase conserved C-terminal domain E2R47_24160 PF00270 DEAD/DEAH box helicase E2R47_24165 PF02541 Ppx/GppA phosphatase family E2R47_24170 PF00580 UvrD/REP helicase N-terminal domain E2R47_24170 PF13361 UvrD-like helicase C-terminal domain E2R47_24175 PF04973 Nicotinamide mononucleotide transporter E2R47_24180 PF01048 Phosphorylase superfamily E2R47_24195 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain E2R47_24195 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain E2R47_24200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2R47_24200 PF03466 LysR substrate binding domain E2R47_24215 PF00291 Pyridoxal-phosphate dependent enzyme E2R47_24215 PF00585 C-terminal regulatory domain of Threonine dehydratase E2R47_24220 PF00920 Dehydratase family E2R47_24225 PF01063 Amino-transferase class IV E2R47_24235 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain E2R47_24235 PF00205 Thiamine pyrophosphate enzyme, central domain E2R47_24235 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain E2R47_24240 PF08046 IlvGEDA operon leader peptide E2R47_24250 PF01078 Magnesium chelatase, subunit ChlI E2R47_24250 PF13335 Magnesium chelatase, subunit ChlI C-terminal E2R47_24255 PF04219 Protein of unknown function, DUF E2R47_24260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2R47_24260 PF03466 LysR substrate binding domain E2R47_24295 PF07729 FCD domain E2R47_24295 PF00392 Bacterial regulatory proteins, gntR family E2R47_24300 PF07690 Major Facilitator Superfamily E2R47_24305 PF00356 Bacterial regulatory proteins, lacI family E2R47_24310 PF00294 pfkB family carbohydrate kinase E2R47_24315 PF13407 Periplasmic binding protein domain E2R47_24320 PF02653 Branched-chain amino acid transport system / permease component E2R47_24325 PF00005 ABC transporter E2R47_24330 PF05025 RbsD / FucU transport protein family E2R47_24335 PF02705 K+ potassium transporter E2R47_24340 PF12592 Protein of unknown function (DUF3763) E2R47_24340 PF17868 AAA lid domain E2R47_24340 PF07728 AAA domain (dynein-related subfamily) E2R47_24345 PF05762 VWA domain containing CoxE-like protein E2R47_24350 PF03590 Aspartate-ammonia ligase E2R47_24355 PF01037 Lrp/AsnC ligand binding domain E2R47_24360 PF00258 Flavodoxin E2R47_24370 PF01134 Glucose inhibited division protein A E2R47_24370 PF13932 GidA associated domain E2R47_24375 PF02527 rRNA small subunit methyltransferase G E2R47_24380 PF03899 ATP synthase I chain E2R47_24385 PF00119 ATP synthase A chain E2R47_24390 PF00137 ATP synthase subunit C E2R47_24395 PF00430 ATP synthase B/B' CF(0) E2R47_24400 PF00213 ATP synthase delta (OSCP) subunit E2R47_24405 PF00306 ATP synthase alpha/beta chain, C terminal domain E2R47_24405 PF02874 ATP synthase alpha/beta family, beta-barrel domain E2R47_24405 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain E2R47_24410 PF00231 ATP synthase E2R47_24415 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain E2R47_24415 PF02874 ATP synthase alpha/beta family, beta-barrel domain E2R47_24420 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain E2R47_24420 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain E2R47_24435 PF12804 MobA-like NTP transferase domain E2R47_24435 PF00132 Bacterial transferase hexapeptide (six repeats) E2R47_24440 PF01380 SIS domain E2R47_24445 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle E2R47_24445 PF12793 Sugar transport-related sRNA regulator N-term E2R47_24450 PF08501 Shikimate dehydrogenase substrate binding domain E2R47_24455 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit E2R47_24455 PF02378 Phosphotransferase system, EIIC E2R47_24460 PF12849 PBP superfamily domain E2R47_24465 PF00528 Binding-protein-dependent transport system inner membrane component E2R47_24470 PF00528 Binding-protein-dependent transport system inner membrane component E2R47_24475 PF00005 ABC transporter E2R47_24480 PF01895 PhoU domain E2R47_24485 PF13419 Haloacid dehalogenase-like hydrolase E2R47_24490 PF00860 Permease family E2R47_24495 PF03358 NADPH-dependent FMN reductase E2R47_24505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2R47_24505 PF03466 LysR substrate binding domain E2R47_24510 PF07690 Major Facilitator Superfamily E2R47_24515 PF12631 MnmE helical domain E2R47_24515 PF01926 50S ribosome-binding GTPase E2R47_24515 PF10396 GTP-binding protein TrmE N-terminus E2R47_24520 PF14849 YidC periplasmic domain E2R47_24520 PF02096 60Kd inner membrane protein E2R47_24525 PF01809 Putative membrane protein insertion efficiency factor E2R47_24530 PF00825 Ribonuclease P E2R47_24535 PF00468 Ribosomal protein L34