locus-tag class description DYM71_000005 PF11638 DnaA N-terminal domain DYM71_000005 PF08299 Bacterial dnaA protein helix-turn-helix DYM71_000005 PF00308 Bacterial dnaA protein DYM71_000010 PF00712 DNA polymerase III beta subunit, N-terminal domain DYM71_000010 PF02767 DNA polymerase III beta subunit, central domain DYM71_000010 PF02768 DNA polymerase III beta subunit, C-terminal domain DYM71_000015 PF02463 RecF/RecN/SMC N terminal domain DYM71_000020 PF01751 Toprim domain DYM71_000020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYM71_000020 PF18053 DNA gyrase B subunit insert domain DYM71_000020 PF00986 DNA gyrase B subunit, carboxyl terminus DYM71_000020 PF00204 DNA gyrase B DYM71_000025 PF03466 LysR substrate binding domain DYM71_000025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DYM71_000030 PF13378 Enolase C-terminal domain-like DYM71_000030 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain DYM71_000035 PF07690 Major Facilitator Superfamily DYM71_000060 PF00072 Response regulator receiver domain DYM71_000060 PF01627 Hpt domain DYM71_000060 PF00512 His Kinase A (phospho-acceptor) domain DYM71_000060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYM71_000060 PF00672 HAMP domain DYM71_000065 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family DYM71_000070 PF00486 Transcriptional regulatory protein, C terminal DYM71_000070 PF00072 Response regulator receiver domain DYM71_000075 PF03264 NapC/NirT cytochrome c family, N-terminal region DYM71_000080 PF00384 Molybdopterin oxidoreductase DYM71_000080 PF01568 Molydopterin dinucleotide binding domain DYM71_000080 PF18364 Molybdopterin oxidoreductase N-terminal domain DYM71_000085 PF02613 Nitrate reductase delta subunit DYM71_000090 PF00034 Cytochrome c DYM71_000090 PF14376 Haem-binding domain DYM71_000090 PF03150 Di-haem cytochrome c peroxidase DYM71_000095 PF00005 ABC transporter DYM71_000100 PF03379 CcmB protein DYM71_000105 PF01578 Cytochrome C assembly protein DYM71_000110 PF04995 Heme exporter protein D (CcmD) DYM71_000115 PF03100 CcmE DYM71_000120 PF01578 Cytochrome C assembly protein DYM71_000120 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal DYM71_000125 PF08534 Redoxin DYM71_000130 PF03918 Cytochrome C biogenesis protein DYM71_000135 PF07676 WD40-like Beta Propeller Repeat DYM71_000135 PF12566 Protein of unknown function (DUF3748) DYM71_000140 PF07119 Protein of unknown function (DUF1375) DYM71_000145 PF00011 Hsp20/alpha crystallin family DYM71_000150 PF00011 Hsp20/alpha crystallin family DYM71_000155 PF02080 TrkA-C domain DYM71_000155 PF06826 Predicted Permease Membrane Region DYM71_000160 PF02656 Domain of unknown function (DUF202) DYM71_000165 PF02656 Domain of unknown function (DUF202) DYM71_000175 PF00291 Pyridoxal-phosphate dependent enzyme DYM71_000180 PF02447 GntP family permease DYM71_000185 PF03466 LysR substrate binding domain DYM71_000185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DYM71_000195 PF07690 Major Facilitator Superfamily DYM71_000205 PF13939 Toxin TisB, type I toxin-antitoxin system DYM71_000215 PF08049 IlvB leader peptide DYM71_000220 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DYM71_000220 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DYM71_000220 PF00205 Thiamine pyrophosphate enzyme, central domain DYM71_000225 PF01842 ACT domain DYM71_000230 PF00455 DeoR C terminal sensor domain DYM71_000230 PF08220 DeoR-like helix-turn-helix domain DYM71_000235 PF00294 pfkB family carbohydrate kinase DYM71_000240 PF07690 Major Facilitator Superfamily DYM71_000250 PF00072 Response regulator receiver domain DYM71_000250 PF00196 Bacterial regulatory proteins, luxR family DYM71_000255 PF05231 MASE1 DYM71_000255 PF07730 Histidine kinase DYM71_000255 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYM71_000260 PF07690 Major Facilitator Superfamily DYM71_000265 PF07690 Major Facilitator Superfamily DYM71_000270 PF06711 Protein of unknown function (DUF1198) DYM71_000275 PF07702 UTRA domain DYM71_000275 PF00392 Bacterial regulatory proteins, gntR family DYM71_000280 PF08279 HTH domain DYM71_000280 PF05043 Mga helix-turn-helix domain DYM71_000280 PF00874 PRD domain DYM71_000280 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DYM71_000285 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DYM71_000290 PF03611 PTS system sugar-specific permease component DYM71_000300 PF01116 Fructose-bisphosphate aldolase class-II DYM71_000320 PF07690 Major Facilitator Superfamily DYM71_000325 PF00232 Glycosyl hydrolase family 1 DYM71_000335 PF00158 Sigma-54 interaction domain DYM71_000335 PF00874 PRD domain DYM71_000345 PF03610 PTS system fructose IIA component DYM71_000345 PF03830 PTS system sorbose subfamily IIB component DYM71_000350 PF03609 PTS system sorbose-specific iic component DYM71_000355 PF03613 PTS system mannose/fructose/sorbose family IID component DYM71_000360 PF03841 L-seryl-tRNA selenium transferase DYM71_000365 PF07071 KDGP aldolase DYM71_000370 PF04754 Putative transposase, YhgA-like DYM71_000375 PF00892 EamA-like transporter family DYM71_000380 PF02308 MgtC family DYM71_000385 PF00690 Cation transporter/ATPase, N-terminus DYM71_000385 PF00689 Cation transporting ATPase, C-terminus DYM71_000400 PF00857 Isochorismatase family DYM71_000410 PF00486 Transcriptional regulatory protein, C terminal DYM71_000420 PF03797 Autotransporter beta-domain DYM71_000425 PF00196 Bacterial regulatory proteins, luxR family DYM71_000445 PF01055 Glycosyl hydrolases family 31 DYM71_000445 PF13802 Galactose mutarotase-like DYM71_000450 PF05170 AsmA family DYM71_000455 PF00860 Permease family DYM71_000460 PF03616 Sodium/glutamate symporter DYM71_000465 PF17191 RecG wedge domain DYM71_000465 PF00270 DEAD/DEAH box helicase DYM71_000465 PF00271 Helicase conserved C-terminal domain DYM71_000470 PF12105 SpoU, rRNA methylase, C-terminal DYM71_000470 PF00588 SpoU rRNA Methylase family DYM71_000475 PF13291 ACT domain DYM71_000475 PF02824 TGS domain DYM71_000475 PF04607 Region found in RelA / SpoT proteins DYM71_000480 PF01192 RNA polymerase Rpb6 DYM71_000485 PF00625 Guanylate kinase DYM71_000490 PF01653 NAD-dependent DNA ligase adenylation domain DYM71_000490 PF03120 NAD-dependent DNA ligase OB-fold domain DYM71_000495 PF03458 UPF0126 domain DYM71_000505 PF03466 LysR substrate binding domain DYM71_000505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DYM71_000510 PF03755 YicC-like family, N-terminal region DYM71_000510 PF08340 Domain of unknown function (DUF1732) DYM71_000515 PF03725 3' exoribonuclease family, domain 2 DYM71_000515 PF01138 3' exoribonuclease family, domain 1 DYM71_000520 PF00156 Phosphoribosyl transferase domain DYM71_000525 PF00440 Bacterial regulatory proteins, tetR family DYM71_000530 PF00692 dUTPase DYM71_000535 PF02441 Flavoprotein DYM71_000535 PF04127 DNA / pantothenate metabolism flavoprotein DYM71_000540 PF04002 RadC-like JAB domain DYM71_000545 PF00830 Ribosomal L28 family DYM71_000550 PF00471 Ribosomal protein L33 DYM71_000555 PF06827 Zinc finger found in FPG and IleRS DYM71_000555 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain DYM71_000555 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain DYM71_000560 PF01467 Cytidylyltransferase-like DYM71_000565 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) DYM71_000570 PF01075 Glycosyltransferase family 9 (heptosyltransferase) DYM71_000575 PF00534 Glycosyl transferases group 1 DYM71_000575 PF13439 Glycosyltransferase Family 4 DYM71_000590 PF13439 Glycosyltransferase Family 4 DYM71_000590 PF00534 Glycosyl transferases group 1 DYM71_000595 PF01501 Glycosyl transferase family 8 DYM71_000595 PF08437 Glycosyl transferase family 8 C-terminal DYM71_000600 PF08437 Glycosyl transferase family 8 C-terminal DYM71_000600 PF01501 Glycosyl transferase family 8 DYM71_000605 PF06176 Lipopolysaccharide core biosynthesis protein (WaaY) DYM71_000615 PF00534 Glycosyl transferases group 1 DYM71_000620 PF04932 O-Antigen ligase DYM71_000625 PF01075 Glycosyltransferase family 9 (heptosyltransferase) DYM71_000630 PF01075 Glycosyltransferase family 9 (heptosyltransferase) DYM71_000635 PF01370 NAD dependent epimerase/dehydratase family DYM71_000640 PF00155 Aminotransferase class I and II DYM71_000645 PF00107 Zinc-binding dehydrogenase DYM71_000645 PF08240 Alcohol dehydrogenase GroES-like domain DYM71_000650 PF00535 Glycosyl transferase family 2 DYM71_000655 PF04748 Divergent polysaccharide deacetylase DYM71_000660 PF01551 Peptidase family M23 DYM71_000665 PF01676 Metalloenzyme superfamily DYM71_000665 PF06415 BPG-independent PGAM N-terminus (iPGM_N) DYM71_000670 PF00581 Rhodanese-like domain DYM71_000675 PF00462 Glutaredoxin DYM71_000680 PF02556 Preprotein translocase subunit SecB DYM71_000685 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus DYM71_000685 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus DYM71_000690 PF06426 Serine acetyltransferase, N-terminal DYM71_000690 PF00132 Bacterial transferase hexapeptide (six repeats) DYM71_000695 PF07690 Major Facilitator Superfamily DYM71_000700 PF13378 Enolase C-terminal domain-like DYM71_000700 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain DYM71_000705 PF00356 Bacterial regulatory proteins, lacI family DYM71_000710 PF00588 SpoU rRNA Methylase family DYM71_000715 PF01070 FMN-dependent dehydrogenase DYM71_000720 PF07729 FCD domain DYM71_000720 PF00392 Bacterial regulatory proteins, gntR family DYM71_000725 PF02652 L-lactate permease DYM71_000730 PF05662 Coiled stalk of trimeric autotransporter adhesin DYM71_000730 PF05658 Head domain of trimeric autotransporter adhesin DYM71_000730 PF03895 YadA-like membrane anchor domain DYM71_000730 PF13018 Extended Signal Peptide of Type V secretion system DYM71_000735 PF11622 Protein of unknown function (DUF3251) DYM71_000740 PF10928 Protein of unknown function (DUF2810) DYM71_000750 PF05068 Mannitol repressor DYM71_000755 PF08125 Mannitol dehydrogenase C-terminal domain DYM71_000755 PF01232 Mannitol dehydrogenase Rossmann domain DYM71_000760 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DYM71_000760 PF02378 Phosphotransferase system, EIIC DYM71_000760 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DYM71_000765 PF11742 Protein of unknown function (DUF3302) DYM71_000770 PF00529 HlyD membrane-fusion protein of T1SS DYM71_000770 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DYM71_000775 PF13417 Glutathione S-transferase, N-terminal domain DYM71_000775 PF00043 Glutathione S-transferase, C-terminal domain DYM71_000780 PF12390 Selenocysteine synthase N terminal DYM71_000780 PF03841 L-seryl-tRNA selenium transferase DYM71_000785 PF00009 Elongation factor Tu GTP binding domain DYM71_000785 PF03144 Elongation factor Tu domain 2 DYM71_000785 PF09106 Elongation factor SelB, winged helix DYM71_000785 PF09107 Elongation factor SelB, winged helix DYM71_000790 PF00480 ROK family DYM71_000795 PF00171 Aldehyde dehydrogenase family DYM71_000800 PF07944 Beta-L-arabinofuranosidase, GH127 DYM71_000810 PF00596 Class II Aldolase and Adducin N-terminal domain DYM71_000815 PF01261 Xylose isomerase-like TIM barrel DYM71_000820 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family DYM71_000825 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DYM71_000825 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DYM71_000830 PF03480 Bacterial extracellular solute-binding protein, family 7 DYM71_000835 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component DYM71_000840 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component DYM71_000845 PF16154 Domain of unknown function (DUF4862) DYM71_000850 PF04074 YhcH/YjgK/YiaL DYM71_000855 PF02615 Malate/L-lactate dehydrogenase DYM71_000860 PF01614 Bacterial transcriptional regulator DYM71_000860 PF09339 IclR helix-turn-helix domain DYM71_000865 PF13247 4Fe-4S dicluster domain DYM71_000870 PF00155 Aminotransferase class I and II DYM71_000875 PF00128 Alpha amylase, catalytic domain DYM71_000880 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase DYM71_000885 PF12833 Helix-turn-helix domain DYM71_000895 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DYM71_000895 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DYM71_000900 PF05360 yiaA/B two helix domain DYM71_000905 PF01757 Acyltransferase family DYM71_000910 PF13983 YsaB-like lipoprotein DYM71_000915 PF02091 Glycyl-tRNA synthetase alpha subunit DYM71_000920 PF05746 DALR anticodon binding domain DYM71_000920 PF02092 Glycyl-tRNA synthetase beta subunit DYM71_000925 PF13276 HTH-like domain DYM71_000925 PF00665 Integrase core domain DYM71_000925 PF13333 Integrase core domain DYM71_000935 PF07690 Major Facilitator Superfamily DYM71_000940 PF00857 Isochorismatase family DYM71_000960 PF00313 'Cold-shock' DNA-binding domain DYM71_000965 PF01381 Helix-turn-helix DYM71_000970 PF11254 Protein of unknown function (DUF3053) DYM71_000975 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DYM71_000975 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DYM71_000980 PF00691 OmpA family DYM71_000980 PF13488 Glycine zipper DYM71_000985 PF00384 Molybdopterin oxidoreductase DYM71_000985 PF18364 Molybdopterin oxidoreductase N-terminal domain DYM71_000985 PF01568 Molydopterin dinucleotide binding domain DYM71_000990 PF00583 Acetyltransferase (GNAT) family DYM71_000995 PF03352 Methyladenine glycosylase DYM71_001000 PF03797 Autotransporter beta-domain DYM71_001005 PF00419 Fimbrial protein DYM71_001010 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain DYM71_001010 PF02753 Pili assembly chaperone PapD, C-terminal domain DYM71_001015 PF13953 PapC C-terminal domain DYM71_001015 PF13954 PapC N-terminal domain DYM71_001015 PF00577 Outer membrane usher protein DYM71_001020 PF00419 Fimbrial protein DYM71_001025 PF00419 Fimbrial protein DYM71_001030 PF00884 Sulfatase DYM71_001030 PF08019 Phosphoethanolamine transferase EptA/EptB DYM71_001055 PF00356 Bacterial regulatory proteins, lacI family DYM71_001065 PF00860 Permease family DYM71_001070 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DYM71_001075 PF00528 Binding-protein-dependent transport system inner membrane component DYM71_001080 PF00528 Binding-protein-dependent transport system inner membrane component DYM71_001080 PF12911 N-terminal TM domain of oligopeptide transport permease C DYM71_001085 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DYM71_001085 PF00005 ABC transporter DYM71_001090 PF00005 ABC transporter DYM71_001090 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DYM71_001095 PF03222 Tryptophan/tyrosine permease family DYM71_001105 PF13940 Toxin Ldr, type I toxin-antitoxin system DYM71_001110 PF01797 Transposase IS200 like DYM71_001115 PF11658 Cellulose biosynthesis protein BcsG DYM71_001120 PF11120 Cellulose biosynthesis protein BcsF DYM71_001125 PF10995 Cellulose biosynthesis GIL DYM71_001130 PF10945 Cellulose biosynthesis protein BcsR DYM71_001135 PF06564 Cellulose biosynthesis protein BcsQ DYM71_001140 PF00535 Glycosyl transferase family 2 DYM71_001140 PF07238 PilZ domain DYM71_001145 PF03170 Bacterial cellulose synthase subunit DYM71_001150 PF01270 Glycosyl hydrolases family 8 DYM71_001165 PF17154 Gammaproteobacterial periplasmic sensor domain DYM71_001165 PF00563 EAL domain DYM71_001165 PF00990 Diguanylate cyclase, GGDEF domain DYM71_001165 PF00672 HAMP domain DYM71_001170 PF00375 Sodium:dicarboxylate symporter family DYM71_001175 PF00675 Insulinase (Peptidase family M16) DYM71_001175 PF05193 Peptidase M16 inactive domain DYM71_001180 PF00294 pfkB family carbohydrate kinase DYM71_001185 PF00563 EAL domain DYM71_001190 PF05170 AsmA family DYM71_001195 PF07690 Major Facilitator Superfamily DYM71_001195 PF00083 Sugar (and other) transporter DYM71_001200 PF03631 Virulence factor BrkB DYM71_001205 PF03466 LysR substrate binding domain DYM71_001205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DYM71_001215 PF00196 Bacterial regulatory proteins, luxR family DYM71_001230 PF01204 Trehalase DYM71_001235 PF00392 Bacterial regulatory proteins, gntR family DYM71_001235 PF07702 UTRA domain DYM71_001240 PF01380 SIS domain DYM71_001245 PF00294 pfkB family carbohydrate kinase DYM71_001250 PF03605 Anaerobic c4-dicarboxylate membrane transporter DYM71_001255 PF00710 Asparaginase, N-terminal DYM71_001255 PF17763 Glutaminase/Asparaginase C-terminal domain DYM71_001260 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DYM71_001260 PF07992 Pyridine nucleotide-disulphide oxidoreductase DYM71_001265 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ DYM71_001270 PF01569 PAP2 superfamily DYM71_001275 PF01432 Peptidase family M3 DYM71_001280 PF04445 Putative SAM-dependent methyltransferase DYM71_001285 PF00854 POT family DYM71_001290 PF00582 Universal stress protein family DYM71_001295 PF10625 Universal stress protein B (UspB) DYM71_001300 PF01384 Phosphate transporter family DYM71_001310 PF13533 Biotin-lipoyl like DYM71_001315 PF00005 ABC transporter DYM71_001330 PF01402 Ribbon-helix-helix protein, copG family DYM71_001330 PF08753 NikR C terminal nickel binding domain DYM71_001335 PF01648 4'-phosphopantetheinyl transferase superfamily DYM71_001340 PF01594 AI-2E family transporter DYM71_001345 PF07690 Major Facilitator Superfamily DYM71_001350 PF08786 DcrB DYM71_001355 PF02592 Putative vitamin uptake transporter DYM71_001360 PF01206 Sulfurtransferase TusA DYM71_001365 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DYM71_001365 PF02203 Tar ligand binding domain homologue DYM71_001365 PF00672 HAMP domain DYM71_001370 PF00403 Heavy-metal-associated domain DYM71_001375 PF07947 YhhN family DYM71_001380 PF10694 Protein of unknown function (DUF2500) DYM71_001385 PF06611 Protein of unknown function (DUF1145) DYM71_001395 PF02881 SRP54-type protein, helical bundle domain DYM71_001395 PF00448 SRP54-type protein, GTPase domain DYM71_001400 PF00005 ABC transporter DYM71_001405 PF18075 FtsX extracellular domain DYM71_001405 PF02687 FtsX-like permease family DYM71_001410 PF04545 Sigma-70, region 4 DYM71_001410 PF04542 Sigma-70 region 2 DYM71_001415 PF13458 Periplasmic binding protein DYM71_001425 PF12568 Acetyltransferase (GNAT) domain, PanZ DYM71_001430 PF13458 Periplasmic binding protein DYM71_001435 PF02653 Branched-chain amino acid transport system / permease component DYM71_001440 PF02653 Branched-chain amino acid transport system / permease component DYM71_001440 PF11862 Domain of unknown function (DUF3382) DYM71_001445 PF00005 ABC transporter DYM71_001445 PF12399 Branched-chain amino acid ATP-binding cassette transporter DYM71_001450 PF00005 ABC transporter DYM71_001455 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system DYM71_001465 PF13416 Bacterial extracellular solute-binding protein DYM71_001470 PF00528 Binding-protein-dependent transport system inner membrane component DYM71_001475 PF00528 Binding-protein-dependent transport system inner membrane component DYM71_001480 PF17912 MalK OB fold domain DYM71_001480 PF00005 ABC transporter DYM71_001485 PF03009 Glycerophosphoryl diester phosphodiesterase family DYM71_001490 PF10956 Protein of unknown function (DUF2756) DYM71_001500 PF02126 Phosphotriesterase family DYM71_001515 PF00294 pfkB family carbohydrate kinase DYM71_001520 PF00583 Acetyltransferase (GNAT) family DYM71_001525 PF02894 Oxidoreductase family, C-terminal alpha/beta domain DYM71_001525 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DYM71_001530 PF17954 Quercetinase C-terminal cupin domain DYM71_001530 PF02678 Pirin DYM71_001535 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family DYM71_001535 PF00356 Bacterial regulatory proteins, lacI family DYM71_001540 PF01202 Shikimate kinase DYM71_001545 PF02447 GntP family permease DYM71_001555 PF01118 Semialdehyde dehydrogenase, NAD binding domain DYM71_001555 PF02774 Semialdehyde dehydrogenase, dimerisation domain DYM71_001560 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) DYM71_001560 PF02806 Alpha amylase, C-terminal all-beta domain DYM71_001560 PF00128 Alpha amylase, catalytic domain DYM71_001565 PF00128 Alpha amylase, catalytic domain DYM71_001565 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) DYM71_001565 PF18390 Glycogen debranching enzyme C-terminal domain DYM71_001570 PF00483 Nucleotidyl transferase DYM71_001575 PF00534 Glycosyl transferases group 1 DYM71_001575 PF08323 Starch synthase catalytic domain DYM71_001580 PF00343 Carbohydrate phosphorylase DYM71_001585 PF09339 IclR helix-turn-helix domain DYM71_001585 PF01614 Bacterial transcriptional regulator DYM71_001590 PF00701 Dihydrodipicolinate synthetase family DYM71_001595 PF00920 Dehydratase family DYM71_001600 PF07690 Major Facilitator Superfamily DYM71_001605 PF00465 Iron-containing alcohol dehydrogenase DYM71_001620 PF16901 C-terminal domain of alpha-glycerophosphate oxidase DYM71_001620 PF01266 FAD dependent oxidoreductase DYM71_001625 PF00581 Rhodanese-like domain DYM71_001630 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease DYM71_001630 PF01694 Rhomboid family DYM71_001635 PF08220 DeoR-like helix-turn-helix domain DYM71_001635 PF00455 DeoR C terminal sensor domain DYM71_001640 PF00196 Bacterial regulatory proteins, luxR family DYM71_001640 PF17874 MalT-like TPR region DYM71_001645 PF00343 Carbohydrate phosphorylase DYM71_001650 PF02446 4-alpha-glucanotransferase DYM71_001655 PF02447 GntP family permease DYM71_001660 PF01106 NifU-like domain DYM71_001660 PF01521 Iron-sulphur cluster biosynthesis DYM71_001665 PF00156 Phosphoribosyl transferase domain DYM71_001670 PF00561 alpha/beta hydrolase fold DYM71_001675 PF04754 Putative transposase, YhgA-like DYM71_001680 PF09012 FeoC like transcriptional regulator DYM71_001685 PF17910 FeoB cytosolic helical domain DYM71_001685 PF07664 Ferrous iron transport protein B C terminus DYM71_001685 PF02421 Ferrous iron transport protein B DYM71_001685 PF07670 Nucleoside recognition DYM71_001690 PF04023 FeoA domain DYM71_001695 PF00575 S1 RNA binding domain DYM71_001695 PF17674 HHH domain DYM71_001695 PF09371 Tex-like protein N-terminal domain DYM71_001695 PF16921 Tex protein YqgF-like domain DYM71_001700 PF03449 Transcription elongation factor, N-terminal DYM71_001700 PF01272 Transcription elongation factor, GreA/GreB, C-term DYM71_001705 PF00072 Response regulator receiver domain DYM71_001705 PF00486 Transcriptional regulatory protein, C terminal DYM71_001710 PF00672 HAMP domain DYM71_001710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYM71_001710 PF00512 His Kinase A (phospho-acceptor) domain DYM71_001715 PF01293 Phosphoenolpyruvate carboxykinase DYM71_001720 PF13687 Domain of unknown function (DUF4153) DYM71_001725 PF01430 Hsp33 protein DYM71_001730 PF01479 S4 domain DYM71_001735 PF13419 Haloacid dehalogenase-like hydrolase DYM71_001740 PF07095 Intracellular growth attenuator protein IgaA DYM71_001745 PF00293 NUDIX domain DYM71_001750 PF00905 Penicillin binding protein transpeptidase domain DYM71_001750 PF00912 Transglycosylase DYM71_001750 PF17092 Penicillin-binding protein OB-like domain DYM71_001760 PF05137 Fimbrial assembly protein (PilN) DYM71_001770 PF10748 DNA utilization proteins HofP DYM71_001775 PF03958 Bacterial type II/III secretion system short domain DYM71_001775 PF00263 Bacterial type II and III secretion system protein DYM71_001780 PF01202 Shikimate kinase DYM71_001785 PF01761 3-dehydroquinate synthase DYM71_001790 PF05036 Sporulation related domain DYM71_001795 PF02086 D12 class N6 adenine-specific DNA methyltransferase DYM71_001800 PF00834 Ribulose-phosphate 3 epimerase family DYM71_001805 PF13419 Haloacid dehalogenase-like hydrolase DYM71_001810 PF00579 tRNA synthetases class I (W and Y) DYM71_001815 PF13978 Protein of unknown function (DUF4223) DYM71_001825 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DYM71_001825 PF14824 Sirohaem biosynthesis protein central DYM71_001825 PF10414 Sirohaem synthase dimerisation region DYM71_001830 PF01226 Formate/nitrite transporter DYM71_001835 PF13806 Rieske-like [2Fe-2S] domain DYM71_001840 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain DYM71_001840 PF04324 BFD-like [2Fe-2S] binding domain DYM71_001840 PF01077 Nitrite and sulphite reductase 4Fe-4S domain DYM71_001840 PF07992 Pyridine nucleotide-disulphide oxidoreductase DYM71_001840 PF18267 Rubredoxin NAD+ reductase C-terminal domain DYM71_001845 PF07690 Major Facilitator Superfamily DYM71_001850 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD DYM71_001855 PF10832 Protein of unknown function (DUF2559) DYM71_001860 PF02661 Fic/DOC family DYM71_001865 PF00117 Glutamine amidotransferase class-I DYM71_001870 PF00202 Aminotransferase class-III DYM71_001875 PF12805 FUSC-like inner membrane protein yccS DYM71_001880 PF13545 Crp-like helix-turn-helix domain DYM71_001880 PF00027 Cyclic nucleotide-binding domain DYM71_001885 PF02566 OsmC-like protein DYM71_001890 PF00485 Phosphoribulokinase / Uridine kinase family DYM71_001895 PF06794 Uncharacterised protein family (UPF0270) DYM71_001900 PF00561 alpha/beta hydrolase fold DYM71_001905 PF08803 Putative mono-oxygenase ydhR DYM71_001910 PF03466 LysR substrate binding domain DYM71_001910 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DYM71_001915 PF12848 ABC transporter DYM71_001915 PF00005 ABC transporter DYM71_001920 PF02525 Flavodoxin-like fold DYM71_001925 PF00999 Sodium/hydrogen exchanger family DYM71_001925 PF02254 TrkA-N domain DYM71_001930 PF09526 Probable metal-binding protein (DUF2387) DYM71_001935 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DYM71_001940 PF04102 SlyX DYM71_001945 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DYM71_001945 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase DYM71_001950 PF13309 HTH domain DYM71_001950 PF08348 YheO-like PAS domain DYM71_001955 PF02635 DsrE/DsrF-like family DYM71_001960 PF02635 DsrE/DsrF-like family DYM71_001965 PF04077 DsrH like protein DYM71_001970 PF00164 Ribosomal protein S12/S23 DYM71_001975 PF00177 Ribosomal protein S7p/S5e DYM71_001980 PF03144 Elongation factor Tu domain 2 DYM71_001980 PF14492 Elongation Factor G, domain II DYM71_001980 PF03764 Elongation factor G, domain IV DYM71_001980 PF00009 Elongation factor Tu GTP binding domain DYM71_001980 PF00679 Elongation factor G C-terminus DYM71_001985 PF00009 Elongation factor Tu GTP binding domain DYM71_001985 PF03144 Elongation factor Tu domain 2 DYM71_001985 PF03143 Elongation factor Tu C-terminal domain DYM71_001990 PF04324 BFD-like [2Fe-2S] binding domain DYM71_001995 PF00210 Ferritin-like domain DYM71_002000 PF01478 Type IV leader peptidase family DYM71_002005 PF00338 Ribosomal protein S10p/S20e DYM71_002010 PF00297 Ribosomal protein L3 DYM71_002015 PF00573 Ribosomal protein L4/L1 family DYM71_002020 PF00276 Ribosomal protein L23 DYM71_002025 PF03947 Ribosomal Proteins L2, C-terminal domain DYM71_002025 PF00181 Ribosomal Proteins L2, RNA binding domain DYM71_002030 PF00203 Ribosomal protein S19 DYM71_002035 PF00237 Ribosomal protein L22p/L17e DYM71_002040 PF00189 Ribosomal protein S3, C-terminal domain DYM71_002040 PF07650 KH domain DYM71_002045 PF00252 Ribosomal protein L16p/L10e DYM71_002050 PF00831 Ribosomal L29 protein DYM71_002055 PF00366 Ribosomal protein S17 DYM71_002060 PF00238 Ribosomal protein L14p/L23e DYM71_002065 PF00467 KOW motif DYM71_002065 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 DYM71_002070 PF00281 Ribosomal protein L5 DYM71_002070 PF00673 ribosomal L5P family C-terminus DYM71_002075 PF00253 Ribosomal protein S14p/S29e DYM71_002080 PF00410 Ribosomal protein S8 DYM71_002085 PF00347 Ribosomal protein L6 DYM71_002090 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast DYM71_002095 PF00333 Ribosomal protein S5, N-terminal domain DYM71_002095 PF03719 Ribosomal protein S5, C-terminal domain DYM71_002100 PF00327 Ribosomal protein L30p/L7e DYM71_002105 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A DYM71_002110 PF00344 SecY translocase DYM71_002115 PF00444 Ribosomal protein L36 DYM71_002120 PF00416 Ribosomal protein S13/S18 DYM71_002125 PF00411 Ribosomal protein S11 DYM71_002130 PF00163 Ribosomal protein S4/S9 N-terminal domain DYM71_002130 PF01479 S4 domain DYM71_002135 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain DYM71_002135 PF01000 RNA polymerase Rpb3/RpoA insert domain DYM71_002135 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain DYM71_002140 PF01196 Ribosomal protein L17 DYM71_002145 PF09350 Domain of unknown function (DUF1992) DYM71_002150 PF13411 MerR HTH family regulatory protein DYM71_002155 PF03889 Alternative ribosome-rescue factor A DYM71_002160 PF01741 Large-conductance mechanosensitive channel, MscL DYM71_002165 PF02254 TrkA-N domain DYM71_002165 PF02080 TrkA-C domain DYM71_002170 PF01189 16S rRNA methyltransferase RsmB/F DYM71_002170 PF01029 NusB family DYM71_002175 PF00551 Formyl transferase DYM71_002175 PF02911 Formyl transferase, C-terminal domain DYM71_002180 PF01327 Polypeptide deformylase DYM71_002185 PF17782 DprA winged helix domain DYM71_002185 PF02481 DNA recombination-mediator protein A DYM71_002190 PF04361 Protein of unknown function (DUF494) DYM71_002195 PF01396 Topoisomerase DNA binding C4 zinc finger DYM71_002200 PF01300 Telomere recombination DYM71_002205 PF18317 Shikimate 5'-dehydrogenase C-terminal domain DYM71_002205 PF08501 Shikimate dehydrogenase substrate binding domain DYM71_002205 PF01488 Shikimate / quinate 5-dehydrogenase DYM71_002210 PF07369 Protein of unknown function (DUF1488) DYM71_002215 PF00132 Bacterial transferase hexapeptide (six repeats) DYM71_002260 PF00873 AcrB/AcrD/AcrF family DYM71_002265 PF00529 HlyD membrane-fusion protein of T1SS DYM71_002265 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DYM71_002270 PF08361 MAATS-type transcriptional repressor, C-terminal region DYM71_002270 PF00440 Bacterial regulatory proteins, tetR family DYM71_002275 PF03707 Bacterial signalling protein N terminal repeat DYM71_002275 PF00563 EAL domain DYM71_002275 PF00990 Diguanylate cyclase, GGDEF domain DYM71_002280 PF10831 Protein of unknown function (DUF2556) DYM71_002285 PF01555 DNA methylase DYM71_002290 PF02954 Bacterial regulatory protein, Fis family DYM71_002295 PF01207 Dihydrouridine synthase (Dus) DYM71_002305 PF00474 Sodium:solute symporter family DYM71_002310 PF06196 Protein of unknown function (DUF997) DYM71_002315 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DYM71_002315 PF02785 Biotin carboxylase C-terminal domain DYM71_002315 PF00289 Biotin carboxylase, N-terminal domain DYM71_002320 PF00364 Biotin-requiring enzyme DYM71_002325 PF01794 Ferric reductase like transmembrane component DYM71_002330 PF00174 Oxidoreductase molybdopterin binding domain DYM71_002335 PF08240 Alcohol dehydrogenase GroES-like domain DYM71_002335 PF00107 Zinc-binding dehydrogenase DYM71_002340 PF17157 Gammaproteobacterial periplasmic sensor domain DYM71_002340 PF00563 EAL domain DYM71_002340 PF00990 Diguanylate cyclase, GGDEF domain DYM71_002350 PF04085 rod shape-determining protein MreC DYM71_002355 PF04093 rod shape-determining protein MreD DYM71_002360 PF02545 Maf-like protein DYM71_002365 PF10150 Ribonuclease E/G family DYM71_002365 PF00575 S1 RNA binding domain DYM71_002370 PF13502 AsmA-like C-terminal region DYM71_002370 PF13116 Protein of unknown function DYM71_002375 PF01523 Putative modulator of DNA gyrase DYM71_002380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DYM71_002380 PF03466 LysR substrate binding domain DYM71_002385 PF07869 Protein of unknown function (DUF1656) DYM71_002390 PF13533 Biotin-lipoyl like DYM71_002395 PF04632 Fusaric acid resistance protein family DYM71_002400 PF01337 Barstar (barnase inhibitor) DYM71_002405 PF07338 Protein of unknown function (DUF1471) DYM71_002410 PF07338 Protein of unknown function (DUF1471) DYM71_002415 PF02863 Arginine repressor, C-terminal domain DYM71_002415 PF01316 Arginine repressor, DNA binding domain DYM71_002420 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain DYM71_002420 PF00056 lactate/malate dehydrogenase, NAD binding domain DYM71_002425 PF07702 UTRA domain DYM71_002425 PF00392 Bacterial regulatory proteins, gntR family DYM71_002435 PF00939 Sodium:sulfate symporter transmembrane region DYM71_002440 PF05681 Fumarate hydratase (Fumerase) DYM71_002445 PF05683 Fumarase C-terminus DYM71_002450 PF04277 Oxaloacetate decarboxylase, gamma chain DYM71_002455 PF00682 HMGL-like DYM71_002455 PF00364 Biotin-requiring enzyme DYM71_002455 PF02436 Conserved carboxylase domain DYM71_002460 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit DYM71_002465 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase DYM71_002470 PF13180 PDZ domain DYM71_002475 PF00595 PDZ domain DYM71_002475 PF13180 PDZ domain DYM71_002480 PF06295 Protein of unknown function (DUF1043) DYM71_002485 PF03969 AFG1-like ATPase DYM71_002490 PF00572 Ribosomal protein L13 DYM71_002495 PF00380 Ribosomal protein S9/S16 DYM71_002505 PF02798 Glutathione S-transferase, N-terminal domain DYM71_002505 PF00043 Glutathione S-transferase, C-terminal domain DYM71_002510 PF04386 Stringent starvation protein B DYM71_002515 PF00392 Bacterial regulatory proteins, gntR family DYM71_002515 PF07729 FCD domain DYM71_002520 PF00701 Dihydrodipicolinate synthetase family DYM71_002525 PF07690 Major Facilitator Superfamily DYM71_002530 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase DYM71_002535 PF00480 ROK family DYM71_002540 PF04074 YhcH/YjgK/YiaL DYM71_002545 PF07969 Amidohydrolase family DYM71_002550 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin DYM71_002555 PF06250 YhcG PDDEXK nuclease domain DYM71_002555 PF17761 DUF1016 N-terminal domain DYM71_002560 PF07992 Pyridine nucleotide-disulphide oxidoreductase DYM71_002560 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster DYM71_002565 PF00310 Glutamine amidotransferases class-II DYM71_002565 PF01493 GXGXG motif DYM71_002565 PF04898 Glutamate synthase central domain DYM71_002565 PF01645 Conserved region in glutamate synthase DYM71_002570 PF04055 Radical SAM superfamily DYM71_002570 PF16199 Radical_SAM C-terminal domain DYM71_002575 PF00512 His Kinase A (phospho-acceptor) domain DYM71_002575 PF00072 Response regulator receiver domain DYM71_002575 PF00989 PAS fold DYM71_002575 PF18415 Histidine kinase receptor ArcB trans-membrane domain DYM71_002575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYM71_002575 PF01627 Hpt domain DYM71_002585 PF00912 Transglycosylase DYM71_002590 PF10707 PhoP regulatory network protein YrbL DYM71_002595 PF00381 PTS HPr component phosphorylation site DYM71_002600 PF03668 P-loop ATPase protein family DYM71_002605 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DYM71_002610 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein DYM71_002615 PF04552 Sigma-54, DNA binding domain DYM71_002615 PF00309 Sigma-54 factor, Activator interacting domain (AID) DYM71_002615 PF04963 Sigma-54 factor, core binding domain DYM71_002620 PF12399 Branched-chain amino acid ATP-binding cassette transporter DYM71_002620 PF00005 ABC transporter DYM71_002625 PF03968 OstA-like protein DYM71_002630 PF06835 Lipopolysaccharide-assembly, LptC-related DYM71_002640 PF01380 SIS domain DYM71_002640 PF00571 CBS domain DYM71_002645 PF01699 Sodium/calcium exchanger protein DYM71_002650 PF00005 ABC transporter DYM71_002655 PF02405 Permease MlaE DYM71_002660 PF02470 MlaD protein DYM71_002665 PF05494 MlaC protein DYM71_002670 PF13466 STAS domain DYM71_002675 PF01722 BolA-like protein DYM71_002680 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) DYM71_002685 PF13693 Winged helix-turn-helix DNA-binding DYM71_002690 PF00348 Polyprenyl synthetase DYM71_002695 PF00829 Ribosomal prokaryotic L21 protein DYM71_002700 PF01016 Ribosomal L27 protein DYM71_002705 PF00892 EamA-like transporter family DYM71_002710 PF01926 50S ribosome-binding GTPase DYM71_002710 PF01018 GTP1/OBG DYM71_002720 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family DYM71_002725 PF01272 Transcription elongation factor, GreA/GreB, C-term DYM71_002725 PF03449 Transcription elongation factor, N-terminal DYM71_002730 PF01985 CRS1 / YhbY (CRM) domain DYM71_002735 PF01728 FtsJ-like methyltransferase DYM71_002740 PF00004 ATPase family associated with various cellular activities (AAA) DYM71_002740 PF06480 FtsH Extracellular DYM71_002740 PF01434 Peptidase family M41 DYM71_002740 PF17862 AAA+ lid domain DYM71_002745 PF00809 Pterin binding enzyme DYM71_002750 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DYM71_002750 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DYM71_002750 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DYM71_002750 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DYM71_002755 PF03840 Preprotein translocase SecG subunit DYM71_002770 PF00764 Arginosuccinate synthase DYM71_002780 PF02576 RimP N-terminal domain DYM71_002780 PF17384 RimP C-terminal SH3 domain DYM71_002785 PF08529 NusA N-terminal domain DYM71_002785 PF13184 NusA-like KH domain DYM71_002790 PF08364 Bacterial translation initiation factor IF-2 associated region DYM71_002790 PF11987 Translation-initiation factor 2 DYM71_002790 PF00009 Elongation factor Tu GTP binding domain DYM71_002790 PF04760 Translation initiation factor IF-2, N-terminal region DYM71_002795 PF02033 Ribosome-binding factor A DYM71_002800 PF09157 Pseudouridine synthase II TruB, C-terminal DYM71_002800 PF01509 TruB family pseudouridylate synthase (N terminal domain) DYM71_002800 PF16198 tRNA pseudouridylate synthase B C-terminal domain DYM71_002805 PF00312 Ribosomal protein S15 DYM71_002810 PF03725 3' exoribonuclease family, domain 2 DYM71_002810 PF01138 3' exoribonuclease family, domain 1 DYM71_002810 PF00013 KH domain DYM71_002810 PF00575 S1 RNA binding domain DYM71_002810 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain DYM71_002815 PF07719 Tetratricopeptide repeat DYM71_002815 PF13181 Tetratricopeptide repeat DYM71_002825 PF12343 Cold shock protein DEAD box A DYM71_002825 PF00271 Helicase conserved C-terminal domain DYM71_002825 PF00270 DEAD/DEAH box helicase DYM71_002825 PF03880 DbpA RNA binding domain DYM71_002830 PF03222 Tryptophan/tyrosine permease family DYM71_002835 PF00296 Luciferase-like monooxygenase DYM71_002840 PF01136 Peptidase family U32 DYM71_002845 PF01136 Peptidase family U32 DYM71_002850 PF02036 SCP-2 sterol transfer family DYM71_002855 PF13508 Acetyltransferase (GNAT) domain DYM71_002860 PF01541 GIY-YIG catalytic domain DYM71_002870 PF01965 DJ-1/PfpI family DYM71_002875 PF13460 NAD(P)H-binding DYM71_002880 PF04972 BON domain DYM71_002885 PF13580 SIS domain DYM71_002890 PF02021 Uncharacterised protein family UPF0102 DYM71_002895 PF04348 LppC putative lipoprotein DYM71_002900 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DYM71_002905 PF08220 DeoR-like helix-turn-helix domain DYM71_002910 PF00107 Zinc-binding dehydrogenase DYM71_002910 PF08240 Alcohol dehydrogenase GroES-like domain DYM71_002915 PF03611 PTS system sugar-specific permease component DYM71_002920 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DYM71_002925 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DYM71_002930 PF08013 Tagatose 6 phosphate kinase DYM71_002935 PF01116 Fructose-bisphosphate aldolase class-II DYM71_002940 PF08666 SAF domain DYM71_002940 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus DYM71_002945 PF03328 HpcH/HpaI aldolase/citrate lyase family DYM71_002950 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase DYM71_002950 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase DYM71_002955 PF02595 Glycerate kinase family DYM71_002970 PF03466 LysR substrate binding domain DYM71_002970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DYM71_002975 PF00291 Pyridoxal-phosphate dependent enzyme DYM71_002980 PF03222 Tryptophan/tyrosine permease family DYM71_002985 PF00871 Acetokinase family DYM71_002990 PF02901 Pyruvate formate lyase-like DYM71_002990 PF01228 Glycine radical DYM71_002995 PF03313 Serine dehydratase alpha chain DYM71_002995 PF03315 Serine dehydratase beta chain DYM71_003005 PF03313 Serine dehydratase alpha chain DYM71_003015 PF02678 Pirin DYM71_003015 PF17954 Quercetinase C-terminal cupin domain DYM71_003020 PF03466 LysR substrate binding domain DYM71_003020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DYM71_003025 PF05656 Protein of unknown function (DUF805) DYM71_003030 PF13409 Glutathione S-transferase, N-terminal domain DYM71_003035 PF07681 DoxX DYM71_003040 PF13997 YqjK-like protein DYM71_003045 PF07332 Putative Actinobacterial Holin-X, holin superfamily III DYM71_003050 PF05957 Bacterial protein of unknown function (DUF883) DYM71_003055 PF06476 Protein of unknown function (DUF1090) DYM71_003060 PF13721 SecD export protein N-terminal TM region DYM71_003065 PF09335 SNARE associated Golgi protein DYM71_003070 PF00375 Sodium:dicarboxylate symporter family DYM71_003075 PF03741 Integral membrane protein TerC family DYM71_003080 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DYM71_003085 PF02698 DUF218 domain DYM71_003090 PF01863 Protein of unknown function DUF45 DYM71_003095 PF05175 Methyltransferase small domain DYM71_003100 PF07992 Pyridine nucleotide-disulphide oxidoreductase DYM71_003100 PF00724 NADH:flavin oxidoreductase / NADH oxidase family DYM71_003105 PF00202 Aminotransferase class-III DYM71_003110 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DYM71_003110 PF08447 PAS fold DYM71_003115 PF02203 Tar ligand binding domain homologue DYM71_003115 PF00672 HAMP domain DYM71_003115 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DYM71_003120 PF03551 Transcriptional regulator PadR-like family DYM71_003125 PF04954 Siderophore-interacting protein DYM71_003125 PF08021 Siderophore-interacting FAD-binding domain DYM71_003135 PF03167 Uracil DNA glycosylase superfamily DYM71_003140 PF04539 Sigma-70 region 3 DYM71_003140 PF04545 Sigma-70, region 4 DYM71_003140 PF03979 Sigma-70 factor, region 1.1 DYM71_003140 PF04546 Sigma-70, non-essential region DYM71_003140 PF04542 Sigma-70 region 2 DYM71_003140 PF00140 Sigma-70 factor, region 1.2 DYM71_003145 PF01807 CHC2 zinc finger DYM71_003145 PF08275 DNA primase catalytic core, N-terminal domain DYM71_003145 PF08278 DNA primase DnaG DnaB-binding DYM71_003145 PF10410 DnaB-helicase binding domain of primase DYM71_003150 PF01165 Ribosomal protein S21 DYM71_003155 PF00814 Glycoprotease family DYM71_003170 PF02660 Glycerol-3-phosphate acyltransferase DYM71_003175 PF02152 Dihydroneopterin aldolase DYM71_003180 PF02673 Bacitracin resistance protein BacA DYM71_003185 PF01743 Poly A polymerase head domain DYM71_003185 PF01966 HD domain DYM71_003185 PF12627 Probable RNA and SrmB- binding site of polymerase A DYM71_003190 PF08239 Bacterial SH3 domain DYM71_003195 PF01928 CYTH domain DYM71_003200 PF03710 Glutamate-ammonia ligase adenylyltransferase DYM71_003200 PF08335 GlnD PII-uridylyltransferase DYM71_003205 PF00294 pfkB family carbohydrate kinase DYM71_003205 PF01467 Cytidylyltransferase-like DYM71_003215 PF01145 SPFH domain / Band 7 family DYM71_003215 PF15975 Flotillin DYM71_003220 PF07290 Protein of unknown function (DUF1449) DYM71_003225 PF08971 Glycogen synthesis protein DYM71_003230 PF04380 Membrane fusogenic activity DYM71_003235 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase DYM71_003245 PF02600 Disulfide bond formation protein DsbB DYM71_003250 PF01323 DSBA-like thioredoxin domain DYM71_003255 PF05935 Arylsulfotransferase (ASST) DYM71_003255 PF17425 Arylsulfotransferase Ig-like domain DYM71_003260 PF02535 ZIP Zinc transporter DYM71_003265 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase DYM71_003270 PF03738 Glutathionylspermidine synthase preATP-grasp DYM71_003275 PF06693 Protein of unknown function (DUF1190) DYM71_003280 PF02321 Outer membrane efflux protein DYM71_003285 PF00293 NUDIX domain DYM71_003290 PF06853 Protein of unknown function (DUF1249) DYM71_003295 PF00149 Calcineurin-like phosphoesterase DYM71_003300 PF05728 Uncharacterised protein family (UPF0227) DYM71_003305 PF01751 Toprim domain DYM71_003305 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYM71_003305 PF00986 DNA gyrase B subunit, carboxyl terminus DYM71_003305 PF00204 DNA gyrase B DYM71_003310 PF03992 Antibiotic biosynthesis monooxygenase DYM71_003315 PF02525 Flavodoxin-like fold DYM71_003320 PF08521 Two-component sensor kinase N-terminal DYM71_003320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYM71_003320 PF00512 His Kinase A (phospho-acceptor) domain DYM71_003325 PF00486 Transcriptional regulatory protein, C terminal DYM71_003325 PF00072 Response regulator receiver domain DYM71_003330 PF04076 Bacterial OB fold (BOF) protein DYM71_003335 PF06445 GyrI-like small molecule binding domain DYM71_003340 PF00521 DNA gyrase/topoisomerase IV, subunit A DYM71_003340 PF03989 DNA gyrase C-terminal domain, beta-propeller DYM71_003345 PF01553 Acyltransferase DYM71_003350 PF00394 Multicopper oxidase DYM71_003350 PF07731 Multicopper oxidase DYM71_003350 PF07732 Multicopper oxidase DYM71_003355 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component DYM71_003365 PF03480 Bacterial extracellular solute-binding protein, family 7 DYM71_003370 PF11842 Domain of unknown function (DUF3362) DYM71_003370 PF08497 Radical SAM N-terminal DYM71_003370 PF04055 Radical SAM superfamily DYM71_003385 PF00939 Sodium:sulfate symporter transmembrane region DYM71_003390 PF00248 Aldo/keto reductase family DYM71_003395 PF00465 Iron-containing alcohol dehydrogenase DYM71_003400 PF06719 AraC-type transcriptional regulator N-terminus DYM71_003400 PF12833 Helix-turn-helix domain DYM71_003405 PF09335 SNARE associated Golgi protein DYM71_003410 PF01053 Cys/Met metabolism PLP-dependent enzyme DYM71_003415 PF01618 MotA/TolQ/ExbB proton channel family DYM71_003420 PF02472 Biopolymer transport protein ExbD/TolR DYM71_003445 PF03350 Uncharacterized protein family, UPF0114 DYM71_003450 PF00672 HAMP domain DYM71_003450 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DYM71_003450 PF02203 Tar ligand binding domain homologue DYM71_003455 PF11115 Protein of unknown function (DUF2623) DYM71_003460 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit DYM71_003460 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal DYM71_003465 PF13247 4Fe-4S dicluster domain DYM71_003470 PF03916 Polysulphide reductase, NrfD DYM71_003475 PF00374 Nickel-dependent hydrogenase DYM71_003480 PF01750 Hydrogenase maturation protease DYM71_003485 PF11939 [NiFe]-hydrogenase assembly, chaperone, HybE DYM71_003490 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA DYM71_003495 PF01455 HupF/HypC family DYM71_003510 PF02798 Glutathione S-transferase, N-terminal domain DYM71_003515 PF03738 Glutathionylspermidine synthase preATP-grasp DYM71_003515 PF05257 CHAP domain DYM71_003525 PF02614 Glucuronate isomerase DYM71_003530 PF01232 Mannitol dehydrogenase Rossmann domain DYM71_003530 PF08125 Mannitol dehydrogenase C-terminal domain DYM71_003535 PF03786 D-mannonate dehydratase (UxuA) DYM71_003540 PF07690 Major Facilitator Superfamily DYM71_003550 PF01522 Polysaccharide deacetylase DYM71_003560 PF04965 Gene 25-like lysozyme DYM71_003565 PF00171 Aldehyde dehydrogenase family DYM71_003570 PF01266 FAD dependent oxidoreductase DYM71_003580 PF13520 Amino acid permease DYM71_003590 PF00196 Bacterial regulatory proteins, luxR family DYM71_003595 PF04055 Radical SAM superfamily DYM71_003600 PF00884 Sulfatase DYM71_003605 PF03466 LysR substrate binding domain DYM71_003605 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DYM71_003610 PF03328 HpcH/HpaI aldolase/citrate lyase family DYM71_003615 PF01575 MaoC like domain DYM71_003620 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain DYM71_003620 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain DYM71_003625 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DYM71_003670 PF00970 Oxidoreductase FAD-binding domain DYM71_003670 PF00175 Oxidoreductase NAD-binding domain DYM71_003670 PF00111 2Fe-2S iron-sulfur cluster binding domain DYM71_003675 PF07338 Protein of unknown function (DUF1471) DYM71_003680 PF02525 Flavodoxin-like fold DYM71_003685 PF03466 LysR substrate binding domain DYM71_003700 PF04474 Protein of unknown function (DUF554) DYM71_003705 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain DYM71_003705 PF01276 Orn/Lys/Arg decarboxylase, major domain DYM71_003705 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain DYM71_003710 PF03825 Nucleoside H+ symporter DYM71_003715 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain DYM71_003715 PF01464 Transglycosylase SLT domain DYM71_003720 PF04362 Bacterial Fe(2+) trafficking DYM71_003725 PF00633 Helix-hairpin-helix motif DYM71_003725 PF14815 NUDIX domain DYM71_003725 PF00730 HhH-GPD superfamily base excision DNA repair protein DYM71_003730 PF02390 Putative methyltransferase DYM71_003735 PF04320 Protein with unknown function (DUF469) DYM71_003740 PF11101 Protein of unknown function (DUF2884) DYM71_003745 PF00710 Asparaginase, N-terminal DYM71_003745 PF17763 Glutaminase/Asparaginase C-terminal domain DYM71_003750 PF06717 Protein of unknown function (DUF1202) DYM71_003755 PF06969 HemN C-terminal domain DYM71_003755 PF04055 Radical SAM superfamily DYM71_003760 PF01725 Ham1 family DYM71_003765 PF02594 Uncharacterised ACR, YggU family COG1872 DYM71_003770 PF02325 YGGT family DYM71_003775 PF01168 Alanine racemase, N-terminal domain DYM71_003780 PF00437 Type II/IV secretion system protein DYM71_003790 PF03652 Holliday junction resolvase DYM71_003795 PF02622 Uncharacterized ACR, COG1678 DYM71_003800 PF02951 Prokaryotic glutathione synthetase, N-terminal domain DYM71_003800 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain DYM71_003805 PF04452 RNA methyltransferase DYM71_003810 PF04231 Endonuclease I DYM71_003815 PF17283 SprT-like zinc ribbon domain DYM71_003815 PF10263 SprT-like family DYM71_003820 PF00083 Sugar (and other) transporter DYM71_003825 PF00438 S-adenosylmethionine synthetase, N-terminal domain DYM71_003825 PF02772 S-adenosylmethionine synthetase, central domain DYM71_003825 PF02773 S-adenosylmethionine synthetase, C-terminal domain DYM71_003835 PF17430 Uncharacterized YqgC-like DYM71_003845 PF17944 Arginine decarboxylase C-terminal helical extension DYM71_003845 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain DYM71_003845 PF17810 Arginine decarboxylase helical bundle domain DYM71_003855 PF07729 FCD domain DYM71_003855 PF00392 Bacterial regulatory proteins, gntR family DYM71_003865 PF01232 Mannitol dehydrogenase Rossmann domain DYM71_003865 PF08125 Mannitol dehydrogenase C-terminal domain DYM71_003870 PF00107 Zinc-binding dehydrogenase DYM71_003870 PF08240 Alcohol dehydrogenase GroES-like domain DYM71_003875 PF02615 Malate/L-lactate dehydrogenase DYM71_003880 PF04074 YhcH/YjgK/YiaL DYM71_003890 PF00491 Arginase family DYM71_003895 PF01435 Peptidase family M48 DYM71_003900 PF02780 Transketolase, C-terminal domain DYM71_003900 PF02779 Transketolase, pyrimidine binding domain DYM71_003900 PF00456 Transketolase, thiamine diphosphate binding domain DYM71_003905 PF00005 ABC transporter DYM71_003910 PF00005 ABC transporter DYM71_003930 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain DYM71_003930 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain DYM71_003935 PF00162 Phosphoglycerate kinase DYM71_003940 PF01116 Fructose-bisphosphate aldolase class-II DYM71_003945 PF05552 Conserved TM helix DYM71_003945 PF00924 Mechanosensitive ion channel DYM71_003950 PF01810 LysE type translocator DYM71_003955 PF04402 Protein of unknown function (DUF541) DYM71_003960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DYM71_003960 PF03466 LysR substrate binding domain DYM71_003965 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) DYM71_003970 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DYM71_003970 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DYM71_003970 PF01842 ACT domain DYM71_003975 PF01812 5-formyltetrahydrofolate cyclo-ligase family DYM71_003985 PF05164 Cell division protein ZapA DYM71_003990 PF03695 Uncharacterised protein family (UPF0149) DYM71_003995 PF05195 Aminopeptidase P, N-terminal domain DYM71_003995 PF00557 Metallopeptidase family M24 DYM71_004000 PF01494 FAD binding domain DYM71_004005 PF01494 FAD binding domain DYM71_004010 PF01571 Aminomethyltransferase folate-binding domain DYM71_004010 PF08669 Glycine cleavage T-protein C-terminal barrel domain DYM71_004015 PF01597 Glycine cleavage H-protein DYM71_004020 PF02347 Glycine cleavage system P-protein DYM71_004030 PF00232 Glycosyl hydrolase family 1 DYM71_004040 PF03006 Haemolysin-III related DYM71_004045 PF01571 Aminomethyltransferase folate-binding domain DYM71_004050 PF03937 Flavinator of succinate dehydrogenase DYM71_004055 PF07254 Membrane-bound toxin component of toxin-antitoxin system DYM71_004060 PF00258 Flavodoxin DYM71_004065 PF00589 Phage integrase family DYM71_004065 PF02899 Phage integrase, N-terminal SAM-like domain DYM71_004070 PF10411 Disulfide bond isomerase protein N-terminus DYM71_004070 PF13098 Thioredoxin-like domain DYM71_004075 PF17768 RecJ OB domain DYM71_004075 PF01368 DHH family DYM71_004075 PF02272 DHHA1 domain DYM71_004085 PF00152 tRNA synthetases class II (D, K and N) DYM71_004085 PF01336 OB-fold nucleic acid binding domain DYM71_004090 PF00293 NUDIX domain DYM71_004095 PF01551 Peptidase family M23 DYM71_004095 PF01476 LysM domain DYM71_004105 PF13356 Arm DNA-binding domain DYM71_004105 PF14659 Phage integrase, N-terminal SAM-like domain DYM71_004105 PF00589 Phage integrase family DYM71_004110 PF01022 Bacterial regulatory protein, arsR family DYM71_004120 PF04198 Putative sugar-binding domain DYM71_004125 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DYM71_004125 PF02378 Phosphotransferase system, EIIC DYM71_004125 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DYM71_004130 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DYM71_004135 PF03611 PTS system sugar-specific permease component DYM71_004140 PF02502 Ribose/Galactose Isomerase DYM71_004145 PF08220 DeoR-like helix-turn-helix domain DYM71_004145 PF00455 DeoR C terminal sensor domain DYM71_004150 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DYM71_004155 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DYM71_004165 PF00834 Ribulose-phosphate 3 epimerase family DYM71_004175 PF01380 SIS domain DYM71_004180 PF13505 Outer membrane protein beta-barrel domain DYM71_004195 PF00577 Outer membrane usher protein DYM71_004195 PF13954 PapC N-terminal domain DYM71_004195 PF13953 PapC C-terminal domain DYM71_004200 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain DYM71_004200 PF02753 Pili assembly chaperone PapD, C-terminal domain DYM71_004220 PF03824 High-affinity nickel-transport protein DYM71_004225 PF02583 Metal-sensitive transcriptional repressor DYM71_004230 PF03222 Tryptophan/tyrosine permease family DYM71_004240 PF03466 LysR substrate binding domain DYM71_004240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DYM71_004245 PF02803 Thiolase, C-terminal domain DYM71_004245 PF00108 Thiolase, N-terminal domain DYM71_004250 PF04962 KduI/IolB family DYM71_004260 PF00083 Sugar (and other) transporter DYM71_004265 PF01177 Asp/Glu/Hydantoin racemase DYM71_004270 PF03466 LysR substrate binding domain DYM71_004270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DYM71_004275 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain DYM71_004275 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain DYM71_004280 PF00356 Bacterial regulatory proteins, lacI family DYM71_004285 PF00356 Bacterial regulatory proteins, lacI family DYM71_004290 PF01553 Acyltransferase DYM71_004290 PF00501 AMP-binding enzyme DYM71_004295 PF07690 Major Facilitator Superfamily DYM71_004300 PF00248 Aldo/keto reductase family DYM71_004305 PF06004 Bacterial protein of unknown function (DUF903) DYM71_004310 PF03741 Integral membrane protein TerC family DYM71_004315 PF02976 DNA mismatch repair enzyme MutH DYM71_004320 PF00293 NUDIX domain DYM71_004325 PF02896 PEP-utilising enzyme, TIM barrel domain DYM71_004325 PF00391 PEP-utilising enzyme, mobile domain DYM71_004325 PF05524 PEP-utilising enzyme, N-terminal DYM71_004325 PF01590 GAF domain DYM71_004330 PF01790 Prolipoprotein diacylglyceryl transferase DYM71_004335 PF00303 Thymidylate synthase DYM71_004340 PF07963 Prokaryotic N-terminal methylation motif DYM71_004345 PF07963 Prokaryotic N-terminal methylation motif DYM71_004350 PF10713 Protein of unknown function (DUF2509) DYM71_004355 PF12528 Type II secretion prepilin peptidase dependent protein C DYM71_004355 PF07963 Prokaryotic N-terminal methylation motif DYM71_004360 PF17946 RecC C-terminal domain DYM71_004365 PF16187 Middle or third domain of peptidase_M16 DYM71_004365 PF05193 Peptidase M16 inactive domain DYM71_004365 PF00675 Insulinase (Peptidase family M16) DYM71_004370 PF13361 UvrD-like helicase C-terminal domain DYM71_004370 PF00580 UvrD/REP helicase N-terminal domain DYM71_004370 PF12705 PD-(D/E)XK nuclease superfamily DYM71_004375 PF13538 UvrD-like helicase C-terminal domain DYM71_004380 PF00696 Amino acid kinase family DYM71_004380 PF00583 Acetyltransferase (GNAT) family DYM71_004385 PF01520 N-acetylmuramoyl-L-alanine amidase DYM71_004385 PF11741 AMIN domain DYM71_004400 PF03562 MltA specific insert domain DYM71_004400 PF06725 3D domain DYM71_004405 PF00899 ThiF family DYM71_004410 PF00892 EamA-like transporter family DYM71_004415 PF02657 Fe-S metabolism associated domain DYM71_004420 PF00266 Aminotransferase class-V DYM71_004425 PF06004 Bacterial protein of unknown function (DUF903) DYM71_004430 PF03466 LysR substrate binding domain DYM71_004430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DYM71_004435 PF04241 Protein of unknown function (DUF423) DYM71_004440 PF01728 FtsJ-like methyltransferase DYM71_004440 PF18125 RlmM ferredoxin-like domain DYM71_004445 PF00455 DeoR C terminal sensor domain DYM71_004445 PF08220 DeoR-like helix-turn-helix domain DYM71_004450 PF05025 RbsD / FucU transport protein family DYM71_004455 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DYM71_004455 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DYM71_004460 PF07881 L-fucose isomerase, first N-terminal domain DYM71_004460 PF02952 L-fucose isomerase, C-terminal domain DYM71_004460 PF07882 L-fucose isomerase, second N-terminal domain DYM71_004465 PF07690 Major Facilitator Superfamily DYM71_004470 PF00596 Class II Aldolase and Adducin N-terminal domain DYM71_004475 PF00465 Iron-containing alcohol dehydrogenase DYM71_004480 PF01367 5'-3' exonuclease, C-terminal SAM fold DYM71_004480 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain DYM71_004485 PF03313 Serine dehydratase alpha chain DYM71_004485 PF03315 Serine dehydratase beta chain DYM71_004495 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases DYM71_004495 PF03641 Possible lysine decarboxylase DYM71_004495 PF11892 Domain of unknown function (DUF3412) DYM71_004500 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term DYM71_004500 PF14489 QueF-like protein DYM71_004505 PF07348 Syd protein (SUKH-2) DYM71_004515 PF04287 tRNA pseudouridine synthase C DYM71_004520 PF00849 RNA pseudouridylate synthase DYM71_004525 PF00258 Flavodoxin DYM71_004535 PF07690 Major Facilitator Superfamily DYM71_004540 PF13378 Enolase C-terminal domain-like DYM71_004540 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain DYM71_004545 PF13378 Enolase C-terminal domain-like DYM71_004550 PF02595 Glycerate kinase family DYM71_004555 PF01627 Hpt domain DYM71_004555 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) DYM71_004555 PF00072 Response regulator receiver domain DYM71_004555 PF00672 HAMP domain DYM71_004555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYM71_004555 PF00512 His Kinase A (phospho-acceptor) domain DYM71_004560 PF05958 tRNA (Uracil-5-)-methyltransferase DYM71_004560 PF01938 TRAM domain DYM71_004565 PF02824 TGS domain DYM71_004565 PF04607 Region found in RelA / SpoT proteins DYM71_004565 PF13291 ACT domain DYM71_004570 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH DYM71_004580 PF03819 MazG nucleotide pyrophosphohydrolase domain DYM71_004585 PF00117 Glutamine amidotransferase class-I DYM71_004585 PF06418 CTP synthase N-terminus DYM71_004590 PF00113 Enolase, C-terminal TIM barrel domain DYM71_004590 PF03952 Enolase, N-terminal domain DYM71_004595 PF04055 Radical SAM superfamily DYM71_004600 PF03099 Biotin/lipoate A/B protein ligase family DYM71_004600 PF12706 Beta-lactamase superfamily domain DYM71_004605 PF01242 6-pyruvoyl tetrahydropterin synthase DYM71_004610 PF00175 Oxidoreductase NAD-binding domain DYM71_004610 PF00258 Flavodoxin DYM71_004610 PF00667 FAD binding domain DYM71_004615 PF01077 Nitrite and sulphite reductase 4Fe-4S domain DYM71_004615 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain DYM71_004620 PF01507 Phosphoadenosine phosphosulfate reductase family DYM71_004625 PF11047 Salmonella outer protein D DYM71_004630 PF18019 HD domain DYM71_004630 PF00270 DEAD/DEAH box helicase DYM71_004630 PF00271 Helicase conserved C-terminal domain DYM71_004635 PF09481 CRISPR-associated protein Cse1 (CRISPR_cse1) DYM71_004645 PF09344 CT1975-like protein DYM71_004650 PF09704 CRISPR-associated protein (Cas_Cas5) DYM71_004660 PF01867 CRISPR associated protein Cas1 DYM71_004665 PF09707 CRISPR-associated protein (Cas_Cas2CT1978) DYM71_004670 PF04389 Peptidase family M28 DYM71_004675 PF01507 Phosphoadenosine phosphosulfate reductase family DYM71_004680 PF00009 Elongation factor Tu GTP binding domain DYM71_004690 PF12084 Protein of unknown function (DUF3561) DYM71_004695 PF04977 Septum formation initiator DYM71_004700 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase DYM71_004705 PF02542 YgbB family DYM71_004710 PF01142 tRNA pseudouridine synthase D (TruD) DYM71_004715 PF01975 Survival protein SurE DYM71_004725 PF01551 Peptidase family M23 DYM71_004725 PF01476 LysM domain DYM71_004730 PF04539 Sigma-70 region 3 DYM71_004730 PF04542 Sigma-70 region 2 DYM71_004730 PF04545 Sigma-70, region 4 DYM71_004730 PF00140 Sigma-70 factor, region 1.2 DYM71_004740 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase DYM71_004745 PF02441 Flavoprotein DYM71_004750 PF01047 MarR family DYM71_004755 PF00455 DeoR C terminal sensor domain DYM71_004755 PF08220 DeoR-like helix-turn-helix domain DYM71_004760 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase DYM71_004760 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase DYM71_004765 PF07005 Sugar-binding N-terminal domain DYM71_004765 PF17042 Nucleotide-binding C-terminal domain DYM71_004770 PF00596 Class II Aldolase and Adducin N-terminal domain DYM71_004775 PF01261 Xylose isomerase-like TIM barrel DYM71_004780 PF01370 NAD dependent epimerase/dehydratase family DYM71_004785 PF02447 GntP family permease DYM71_004790 PF03466 LysR substrate binding domain DYM71_004790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DYM71_004795 PF07690 Major Facilitator Superfamily DYM71_004805 PF05192 MutS domain III DYM71_004805 PF00488 MutS domain V DYM71_004805 PF01624 MutS domain I DYM71_004805 PF05190 MutS family domain IV DYM71_004805 PF05188 MutS domain II DYM71_004815 PF00149 Calcineurin-like phosphoesterase DYM71_004855 PF04741 InvH outer membrane lipoprotein DYM71_004860 PF12833 Helix-turn-helix domain DYM71_004865 PF03958 Bacterial type II/III secretion system short domain DYM71_004865 PF00263 Bacterial type II and III secretion system protein DYM71_004870 PF07201 HrpJ-like domain DYM71_004875 PF00771 FHIPEP family DYM71_004880 PF03519 Invasion protein B family DYM71_004885 PF18269 T3SS EscN ATPase C-terminal domain DYM71_004885 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DYM71_004885 PF02874 ATP synthase alpha/beta family, beta-barrel domain DYM71_004890 PF02090 Salmonella surface presentation of antigen gene type M protein DYM71_004895 PF02510 Surface presentation of antigens protein DYM71_004900 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term DYM71_004905 PF00813 FliP family DYM71_004910 PF01313 Bacterial export proteins, family 3 DYM71_004915 PF01311 Bacterial export proteins, family 1 DYM71_004920 PF01312 FlhB HrpN YscU SpaS Family DYM71_004925 PF07720 Tetratricopeptide repeat DYM71_004930 PF16535 Type III cell invasion protein SipB DYM71_004930 PF04888 Secretion system effector C (SseC) like family DYM71_004935 PF09599 Salmonella-Shigella invasin protein C (IpaC_SipC) DYM71_004940 PF06511 Type III secretion systems tip complex components DYM71_004945 PF09052 SipA N-terminal domain DYM71_004950 PF00550 Phosphopantetheine attachment site DYM71_004960 PF05932 Tir chaperone protein (CesT) family DYM71_004965 PF03545 Yersinia virulence determinant (YopE) DYM71_004965 PF00102 Protein-tyrosine phosphatase DYM71_004965 PF09119 SicP binding DYM71_004970 PF01464 Transglycosylase SLT domain DYM71_004975 PF00486 Transcriptional regulatory protein, C terminal DYM71_004980 PF12833 Helix-turn-helix domain DYM71_004985 PF09480 Type III secretion system protein PrgH-EprH (PrgH) DYM71_004990 PF09392 Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF DYM71_005000 PF01514 Secretory protein of YscJ/FliF family DYM71_005005 PF09482 Bacterial type III secretion apparatus protein (OrgA_MxiK) DYM71_005020 PF12833 Helix-turn-helix domain DYM71_005035 PF00950 ABC 3 transport family DYM71_005040 PF00950 ABC 3 transport family DYM71_005045 PF00005 ABC transporter DYM71_005050 PF01297 Zinc-uptake complex component A periplasmic DYM71_005055 PF11756 Nitrous oxide-stimulated promoter DYM71_005060 PF01590 GAF domain DYM71_005060 PF00158 Sigma-54 interaction domain DYM71_005060 PF02954 Bacterial regulatory protein, Fis family DYM71_005065 PF02769 AIR synthase related protein, C-terminal domain DYM71_005065 PF00586 AIR synthase related protein, N-terminal domain DYM71_005070 PF01924 Hydrogenase formation hypA family DYM71_005075 PF01455 HupF/HypC family DYM71_005080 PF02492 CobW/HypB/UreG, nucleotide-binding domain DYM71_005085 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA DYM71_005090 PF11046 Transcriptional repressor of hyc and hyp operons DYM71_005095 PF13247 4Fe-4S dicluster domain DYM71_005100 PF00361 Proton-conducting membrane transporter DYM71_005105 PF00146 NADH dehydrogenase DYM71_005110 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit DYM71_005110 PF00374 Nickel-dependent hydrogenase DYM71_005110 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit DYM71_005115 PF12838 4Fe-4S dicluster domain DYM71_005120 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit DYM71_005125 PF07450 Formate hydrogenlyase maturation protein HycH DYM71_005130 PF01750 Hydrogenase maturation protease DYM71_005140 PF12800 4Fe-4S binding domain DYM71_005140 PF13247 4Fe-4S dicluster domain DYM71_005145 PF07503 HypF finger DYM71_005145 PF01300 Telomere recombination DYM71_005145 PF17788 HypF Kae1-like domain DYM71_005145 PF00708 Acylphosphatase DYM71_005150 PF07992 Pyridine nucleotide-disulphide oxidoreductase DYM71_005150 PF18113 Rubredoxin binding C-terminal domain DYM71_005155 PF00258 Flavodoxin DYM71_005155 PF00301 Rubredoxin DYM71_005155 PF00753 Metallo-beta-lactamase superfamily DYM71_005160 PF00158 Sigma-54 interaction domain DYM71_005160 PF01590 GAF domain DYM71_005165 PF00571 CBS domain DYM71_005165 PF01380 SIS domain DYM71_005170 PF00455 DeoR C terminal sensor domain DYM71_005170 PF08220 DeoR-like helix-turn-helix domain DYM71_005175 PF06923 Glucitol operon activator protein (GutM) DYM71_005180 PF00106 short chain dehydrogenase DYM71_005185 PF03829 PTS system glucitol/sorbitol-specific IIA component DYM71_005190 PF07663 Sorbitol phosphotransferase enzyme II C-terminus DYM71_005190 PF03612 Sorbitol phosphotransferase enzyme II N-terminus DYM71_005195 PF03608 PTS system enzyme II sorbitol-specific factor DYM71_005200 PF13406 Transglycosylase SLT domain DYM71_005205 PF02464 Competence-damaged protein DYM71_005210 PF00154 recA bacterial DNA recombination protein DYM71_005215 PF02631 RecX family DYM71_005220 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DYM71_005220 PF01411 tRNA synthetases class II (A) DYM71_005220 PF02272 DHHA1 domain DYM71_005225 PF02599 Global regulator protein family DYM71_005255 PF13419 Haloacid dehalogenase-like hydrolase DYM71_005260 PF09335 SNARE associated Golgi protein DYM71_005265 PF04262 Glutamate-cysteine ligase DYM71_005270 PF02664 S-Ribosylhomocysteinase (LuxS) DYM71_005280 PF07690 Major Facilitator Superfamily DYM71_005285 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DYM71_005285 PF00529 HlyD membrane-fusion protein of T1SS DYM71_005290 PF01047 MarR family DYM71_005295 PF07690 Major Facilitator Superfamily DYM71_005300 PF04069 Substrate binding domain of ABC-type glycine betaine transport system DYM71_005305 PF00528 Binding-protein-dependent transport system inner membrane component DYM71_005310 PF00571 CBS domain DYM71_005310 PF00005 ABC transporter DYM71_005315 PF00268 Ribonucleotide reductase, small chain DYM71_005320 PF02867 Ribonucleotide reductase, barrel domain DYM71_005320 PF08343 Ribonucleotide reductase N-terminal DYM71_005320 PF00317 Ribonucleotide reductase, all-alpha domain DYM71_005325 PF07972 NrdI Flavodoxin like DYM71_005330 PF00462 Glutaredoxin DYM71_005335 PF02627 Carboxymuconolactone decarboxylase family DYM71_005340 PF00155 Aminotransferase class I and II DYM71_005340 PF00392 Bacterial regulatory proteins, gntR family DYM71_005345 PF05957 Bacterial protein of unknown function (DUF883) DYM71_005350 PF09400 Protein of unknown function (DUF2002) DYM71_005355 PF06610 L-alanine exporter DYM71_005360 PF00816 H-NS histone family DYM71_005370 PF00581 Rhodanese-like domain DYM71_005370 PF11127 Protein of unknown function (DUF2892) DYM71_005375 PF01022 Bacterial regulatory protein, arsR family DYM71_005380 PF01679 Proteolipid membrane potential modulator DYM71_005385 PF01476 LysM domain DYM71_005385 PF04972 BON domain DYM71_005390 PF00392 Bacterial regulatory proteins, gntR family DYM71_005390 PF07729 FCD domain DYM71_005395 PF00324 Amino acid permease DYM71_005400 PF00202 Aminotransferase class-III DYM71_005405 PF00171 Aldehyde dehydrogenase family DYM71_005410 PF01266 FAD dependent oxidoreductase DYM71_005415 PF08943 CsiD DYM71_005420 PF01970 Tripartite tricarboxylate transporter TctA family DYM71_005435 PF00486 Transcriptional regulatory protein, C terminal DYM71_005435 PF00072 Response regulator receiver domain DYM71_005440 PF00512 His Kinase A (phospho-acceptor) domain DYM71_005440 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYM71_005440 PF08521 Two-component sensor kinase N-terminal DYM71_005445 PF03824 High-affinity nickel-transport protein DYM71_005455 PF04393 Protein of unknown function (DUF535) DYM71_005460 PF00805 Pentapeptide repeats (8 copies) DYM71_005470 PF00593 TonB dependent receptor DYM71_005470 PF07715 TonB-dependent Receptor Plug Domain DYM71_005475 PF00756 Putative esterase DYM71_005485 PF00664 ABC transporter transmembrane region DYM71_005485 PF00005 ABC transporter DYM71_005490 PF06722 Protein of unknown function (DUF1205) DYM71_005500 PF02796 Helix-turn-helix domain of resolvase DYM71_005500 PF00239 Resolvase, N terminal domain DYM71_005505 PF00669 Bacterial flagellin N-terminal helical region DYM71_005505 PF08884 Flagellin D3 domain DYM71_005505 PF00700 Bacterial flagellin C-terminal helical region DYM71_005510 PF03614 Repressor of phase-1 flagellin DYM71_005525 PF17345 Family of unknown function (DUF5375) DYM71_005550 PF04606 Ogr/Delta-like zinc finger DYM71_005565 PF13356 Arm DNA-binding domain DYM71_005565 PF00589 Phage integrase family DYM71_005575 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DYM71_005575 PF00529 HlyD membrane-fusion protein of T1SS DYM71_005580 PF00664 ABC transporter transmembrane region DYM71_005580 PF00005 ABC transporter DYM71_005595 PF01668 SmpB protein DYM71_005600 PF03364 Polyketide cyclase / dehydrase and lipid transport DYM71_005605 PF03658 RnfH family Ubiquitin DYM71_005610 PF04355 SmpA / OmlA family DYM71_005615 PF02463 RecF/RecN/SMC N terminal domain DYM71_005620 PF01513 ATP-NAD kinase DYM71_005625 PF01025 GrpE DYM71_005635 PF01595 Cyclin M transmembrane N-terminal domain DYM71_005635 PF03471 Transporter associated domain DYM71_005635 PF00571 CBS domain DYM71_005640 PF01578 Cytochrome C assembly protein DYM71_005645 PF02881 SRP54-type protein, helical bundle domain DYM71_005645 PF02978 Signal peptide binding domain DYM71_005645 PF00448 SRP54-type protein, GTPase domain DYM71_005650 PF00886 Ribosomal protein S16 DYM71_005655 PF01782 RimM N-terminal domain DYM71_005655 PF05239 PRC-barrel domain DYM71_005660 PF01746 tRNA (Guanine-1)-methyltransferase DYM71_005665 PF01245 Ribosomal protein L19 DYM71_005670 PF00990 Diguanylate cyclase, GGDEF domain DYM71_005670 PF17152 Periplasmic sensor domain DYM71_005675 PF13689 YfiR/HmsC-like DYM71_005680 PF00793 DAHP synthetase I family DYM71_005685 PF01817 Chorismate mutase type II DYM71_005685 PF02153 Prephenate dehydrogenase DYM71_005690 PF08450 SMP-30/Gluconolactonase/LRE-like region DYM71_005695 PF00800 Prephenate dehydratase DYM71_005695 PF01817 Chorismate mutase type II DYM71_005705 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein DYM71_005710 PF13525 Outer membrane lipoprotein DYM71_005715 PF01479 S4 domain DYM71_005715 PF00849 RNA pseudouridylate synthase DYM71_005725 PF00004 ATPase family associated with various cellular activities (AAA) DYM71_005725 PF10431 C-terminal, D2-small domain, of ClpB protein DYM71_005725 PF02861 Clp amino terminal domain, pathogenicity island component DYM71_005725 PF17871 AAA lid domain DYM71_005725 PF07724 AAA domain (Cdc48 subfamily) DYM71_005755 PF00083 Sugar (and other) transporter DYM71_005760 PF10043 Predicted periplasmic lipoprotein (DUF2279) DYM71_005765 PF13091 PLD-like domain DYM71_005770 PF00583 Acetyltransferase (GNAT) family DYM71_005770 PF13607 Succinyl-CoA ligase like flavodoxin domain DYM71_005770 PF13380 CoA binding domain DYM71_005780 PF00085 Thioredoxin DYM71_005785 PF00588 SpoU rRNA Methylase family DYM71_005785 PF08032 RNA 2'-O ribose methyltransferase substrate binding DYM71_005790 PF03167 Uracil DNA glycosylase superfamily DYM71_005795 PF01228 Glycine radical DYM71_005800 PF01810 LysE type translocator DYM71_005805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DYM71_005805 PF03466 LysR substrate binding domain DYM71_005810 PF00271 Helicase conserved C-terminal domain DYM71_005810 PF00270 DEAD/DEAH box helicase DYM71_005815 PF05175 Methyltransferase small domain DYM71_005820 PF00890 FAD binding domain DYM71_005820 PF02910 Fumarate reductase flavoprotein C-term DYM71_005830 PF08281 Sigma-70, region 4 DYM71_005830 PF04542 Sigma-70 region 2 DYM71_005835 PF03873 Anti sigma-E protein RseA, C-terminal domain DYM71_005835 PF03872 Anti sigma-E protein RseA, N-terminal domain DYM71_005840 PF17188 MucB/RseB C-terminal domain DYM71_005840 PF03888 MucB/RseB N-terminal domain DYM71_005850 PF06421 GTP-binding protein LepA C-terminus DYM71_005850 PF03144 Elongation factor Tu domain 2 DYM71_005850 PF00009 Elongation factor Tu GTP binding domain DYM71_005850 PF00679 Elongation factor G C-terminus DYM71_005855 PF10502 Signal peptidase, peptidase S26 DYM71_005860 PF00035 Double-stranded RNA binding motif DYM71_005860 PF14622 Ribonuclease-III-like DYM71_005865 PF01926 50S ribosome-binding GTPase DYM71_005865 PF07650 KH domain DYM71_005870 PF02565 Recombination protein O C terminal DYM71_005870 PF11967 Recombination protein O N terminal DYM71_005875 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ DYM71_005880 PF01648 4'-phosphopantetheinyl transferase superfamily DYM71_005885 PF12838 4Fe-4S dicluster domain DYM71_005890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DYM71_005890 PF03466 LysR substrate binding domain DYM71_005895 PF07690 Major Facilitator Superfamily DYM71_005900 PF08546 Ketopantoate reductase PanE/ApbA C terminal DYM71_005900 PF02558 Ketopantoate reductase PanE/ApbA DYM71_005905 PF01380 SIS domain DYM71_005905 PF01418 Helix-turn-helix domain, rpiR family DYM71_005910 PF01380 SIS domain DYM71_005915 PF00367 phosphotransferase system, EIIB DYM71_005915 PF02378 Phosphotransferase system, EIIC DYM71_005925 PF14437 MafB19-like deaminase DYM71_005930 PF00497 Bacterial extracellular solute-binding proteins, family 3 DYM71_005930 PF01464 Transglycosylase SLT domain DYM71_005940 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain DYM71_005940 PF02769 AIR synthase related protein, C-terminal domain DYM71_005940 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal DYM71_005945 PF00512 His Kinase A (phospho-acceptor) domain DYM71_005945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYM71_005950 PF13942 YfhG lipoprotein DYM71_005955 PF00158 Sigma-54 interaction domain DYM71_005955 PF00072 Response regulator receiver domain DYM71_005960 PF00543 Nitrogen regulatory protein P-II DYM71_005965 PF00854 POT family DYM71_005970 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain DYM71_005970 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain DYM71_005970 PF01276 Orn/Lys/Arg decarboxylase, major domain DYM71_005975 PF13520 Amino acid permease DYM71_005980 PF18500 CadC C-terminal domain 1 DYM71_005980 PF00486 Transcriptional regulatory protein, C terminal DYM71_005985 PF00970 Oxidoreductase FAD-binding domain DYM71_005985 PF00175 Oxidoreductase NAD-binding domain DYM71_005985 PF00042 Globin DYM71_005990 PF00464 Serine hydroxymethyltransferase DYM71_005995 PF12832 MFS_1 like family DYM71_006000 PF00874 PRD domain DYM71_006010 PF03824 High-affinity nickel-transport protein DYM71_006015 PF01077 Nitrite and sulphite reductase 4Fe-4S domain DYM71_006015 PF13187 4Fe-4S dicluster domain DYM71_006015 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain DYM71_006020 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B DYM71_006020 PF00175 Oxidoreductase NAD-binding domain DYM71_006025 PF17179 4Fe-4S dicluster domain DYM71_006030 PF12146 Serine aminopeptidase, S33 DYM71_006035 PF00459 Inositol monophosphatase family DYM71_006040 PF00588 SpoU rRNA Methylase family DYM71_006045 PF02082 Transcriptional regulator DYM71_006050 PF00266 Aminotransferase class-V DYM71_006055 PF01592 NifU-like N terminal domain DYM71_006060 PF01521 Iron-sulphur cluster biosynthesis DYM71_006065 PF07743 HSCB C-terminal oligomerisation domain DYM71_006070 PF00012 Hsp70 protein DYM71_006075 PF00111 2Fe-2S iron-sulfur cluster binding domain DYM71_006080 PF04384 Iron-sulphur cluster assembly DYM71_006085 PF00883 Cytosol aminopeptidase family, catalytic domain DYM71_006085 PF12404 Peptidase DYM71_006090 PF14581 SseB protein C-terminal domain DYM71_006090 PF07179 SseB protein N-terminal domain DYM71_006105 PF00581 Rhodanese-like domain DYM71_006110 PF07678 A-macroglobulin TED domain DYM71_006110 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain DYM71_006110 PF01835 MG2 domain DYM71_006110 PF07703 Alpha-2-macroglobulin bait region domain DYM71_006110 PF00207 Alpha-2-macroglobulin family DYM71_006110 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain DYM71_006110 PF17962 Bacterial macroglobulin domain 6 DYM71_006110 PF11974 Bacterial alpha-2-macroglobulin MG3 domain DYM71_006110 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain DYM71_006115 PF06832 Penicillin-Binding Protein C-terminus Family DYM71_006115 PF00912 Transglycosylase DYM71_006115 PF00905 Penicillin binding protein transpeptidase domain DYM71_006120 PF04879 Molybdopterin oxidoreductase Fe4S4 domain DYM71_006120 PF00384 Molybdopterin oxidoreductase DYM71_006120 PF01568 Molydopterin dinucleotide binding domain DYM71_006125 PF12800 4Fe-4S binding domain DYM71_006125 PF13247 4Fe-4S dicluster domain DYM71_006140 PF00334 Nucleoside diphosphate kinase DYM71_006145 PF04055 Radical SAM superfamily DYM71_006150 PF13464 Domain of unknown function (DUF4115) DYM71_006155 PF04551 GcpE protein DYM71_006160 PF03129 Anticodon binding domain DYM71_006160 PF13393 Histidyl-tRNA synthetase DYM71_006165 PF09976 Tetratricopeptide repeat-like domain DYM71_006170 PF13360 PQQ-like domain DYM71_006175 PF01926 50S ribosome-binding GTPase DYM71_006175 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal DYM71_006180 PF07191 zinc-ribbons DYM71_006185 PF02368 Bacterial Ig-like domain (group 2) DYM71_006185 PF07979 Intimin C-type lectin domain DYM71_006185 PF01476 LysM domain DYM71_006185 PF11924 Inverse autotransporter, beta-domain DYM71_006185 PF02369 Bacterial Ig-like domain (group 1) DYM71_006210 PF03797 Autotransporter beta-domain DYM71_006215 PF13742 OB-fold nucleic acid binding domain DYM71_006215 PF02601 Exonuclease VII, large subunit DYM71_006220 PF00571 CBS domain DYM71_006220 PF00478 IMP dehydrogenase / GMP reductase domain DYM71_006225 PF02540 NAD synthase DYM71_006225 PF00117 Glutamine amidotransferase class-I DYM71_006225 PF00958 GMP synthase C terminal domain DYM71_006245 PF11119 Protein of unknown function (DUF2633) DYM71_006255 PF05231 MASE1 DYM71_006255 PF00563 EAL domain DYM71_006260 PF02541 Ppx/GppA phosphatase family DYM71_006265 PF02503 Polyphosphate kinase middle domain DYM71_006265 PF13090 Polyphosphate kinase C-terminal domain 2 DYM71_006265 PF13089 Polyphosphate kinase N-terminal domain DYM71_006265 PF17941 Polyphosphate kinase C-terminal domain 1 DYM71_006270 PF00551 Formyl transferase DYM71_006275 PF02769 AIR synthase related protein, C-terminal domain DYM71_006275 PF00586 AIR synthase related protein, N-terminal domain DYM71_006285 PF00860 Permease family DYM71_006290 PF00308 Bacterial dnaA protein DYM71_006295 PF03960 ArsC family DYM71_006300 PF01435 Peptidase family M48 DYM71_006305 PF01594 AI-2E family transporter DYM71_006310 PF05651 Putative sugar diacid recognition DYM71_006310 PF17853 GGDEF-like domain DYM71_006310 PF13556 PucR C-terminal helix-turn-helix domain DYM71_006315 PF02447 GntP family permease DYM71_006320 PF02595 Glycerate kinase family DYM71_006325 PF00578 AhpC/TSA family DYM71_006330 PF01842 ACT domain DYM71_006335 PF00701 Dihydrodipicolinate synthetase family DYM71_006340 PF06804 NlpB/DapX lipoprotein DYM71_006345 PF01259 SAICAR synthetase DYM71_006350 PF04228 Putative neutral zinc metallopeptidase DYM71_006355 PF08351 Domain of unknown function (DUF1726) DYM71_006355 PF13718 GNAT acetyltransferase 2 DYM71_006355 PF05127 Helicase DYM71_006355 PF17176 tRNA-binding domain DYM71_006360 PF13980 Uncharacterised protein family (UPF0370) DYM71_006365 PF07687 Peptidase dimerisation domain DYM71_006365 PF01546 Peptidase family M20/M25/M40 DYM71_006370 PF03960 ArsC family DYM71_006380 PF00873 AcrB/AcrD/AcrF family DYM71_006385 PF07730 Histidine kinase DYM71_006385 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term DYM71_006385 PF00672 HAMP domain DYM71_006385 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYM71_006390 PF07992 Pyridine nucleotide-disulphide oxidoreductase DYM71_006390 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster DYM71_006390 PF13247 4Fe-4S dicluster domain DYM71_006395 PF00144 Beta-lactamase DYM71_006400 PF00293 NUDIX domain DYM71_006405 PF06674 Protein of unknown function (DUF1176) DYM71_006415 PF02780 Transketolase, C-terminal domain DYM71_006415 PF00456 Transketolase, thiamine diphosphate binding domain DYM71_006415 PF02779 Transketolase, pyrimidine binding domain DYM71_006420 PF00923 Transaldolase/Fructose-6-phosphate aldolase DYM71_006425 PF01515 Phosphate acetyl/butaryl transferase DYM71_006425 PF03949 Malic enzyme, NAD binding domain DYM71_006425 PF00390 Malic enzyme, N-terminal domain DYM71_006430 PF00936 BMC domain DYM71_006435 PF10662 Ethanolamine utilisation - propanediol utilisation DYM71_006440 PF06249 Ethanolamine utilisation protein EutQ DYM71_006445 PF01923 Cobalamin adenosyltransferase DYM71_006450 PF01515 Phosphate acetyl/butaryl transferase DYM71_006455 PF00936 BMC domain DYM71_006460 PF03319 Ethanolamine utilisation protein EutN/carboxysome DYM71_006465 PF00171 Aldehyde dehydrogenase family DYM71_006475 PF00465 Iron-containing alcohol dehydrogenase DYM71_006480 PF04346 Ethanolamine utilisation protein, EutH DYM71_006485 PF06277 Ethanolamine utilisation protein EutA DYM71_006490 PF06751 Ethanolamine ammonia lyase large subunit (EutB) DYM71_006495 PF05985 Ethanolamine ammonia-lyase light chain (EutC) DYM71_006500 PF00936 BMC domain DYM71_006505 PF16365 Ethanolamine utilization protein EutK C-terminus DYM71_006505 PF00936 BMC domain DYM71_006510 PF12833 Helix-turn-helix domain DYM71_006525 PF01218 Coproporphyrinogen III oxidase DYM71_006530 PF01520 N-acetylmuramoyl-L-alanine amidase DYM71_006535 PF00583 Acetyltransferase (GNAT) family DYM71_006540 PF11143 Protein of unknown function (DUF2919) DYM71_006545 PF06572 Protein of unknown function (DUF1131) DYM71_006550 PF04261 Dyp-type peroxidase family DYM71_006565 PF00528 Binding-protein-dependent transport system inner membrane component DYM71_006570 PF00528 Binding-protein-dependent transport system inner membrane component DYM71_006575 PF00005 ABC transporter DYM71_006580 PF00291 Pyridoxal-phosphate dependent enzyme DYM71_006590 PF17263 Family of unknown function (DUF5329) DYM71_006595 PF00117 Glutamine amidotransferase class-I DYM71_006600 PF00155 Aminotransferase class I and II DYM71_006600 PF00392 Bacterial regulatory proteins, gntR family DYM71_006605 PF08543 Phosphomethylpyrimidine kinase DYM71_006615 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 DYM71_006620 PF05524 PEP-utilising enzyme, N-terminal DYM71_006620 PF00391 PEP-utilising enzyme, mobile domain DYM71_006620 PF02896 PEP-utilising enzyme, TIM barrel domain DYM71_006625 PF00381 PTS HPr component phosphorylation site DYM71_006630 PF00291 Pyridoxal-phosphate dependent enzyme DYM71_006640 PF04354 ZipA, C-terminal FtsZ-binding domain DYM71_006645 PF01653 NAD-dependent DNA ligase adenylation domain DYM71_006645 PF00533 BRCA1 C Terminus (BRCT) domain DYM71_006645 PF03120 NAD-dependent DNA ligase OB-fold domain DYM71_006645 PF03119 NAD-dependent DNA ligase C4 zinc finger domain DYM71_006645 PF12826 Helix-hairpin-helix motif DYM71_006650 PF12843 Putative quorum-sensing-regulated virulence factor DYM71_006655 PF13593 SBF-like CPA transporter family (DUF4137) DYM71_006660 PF03466 LysR substrate binding domain DYM71_006660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DYM71_006665 PF03502 Nucleoside-specific channel-forming protein, Tsx DYM71_006670 PF01048 Phosphorylase superfamily DYM71_006675 PF03825 Nucleoside H+ symporter DYM71_006685 PF03466 LysR substrate binding domain DYM71_006685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DYM71_006710 PF00749 tRNA synthetases class I (E and Q), catalytic domain DYM71_006715 PF07037 Putative transcription regulator (DUF1323) DYM71_006720 PF07037 Putative transcription regulator (DUF1323) DYM71_006735 PF05231 MASE1 DYM71_006735 PF00563 EAL domain DYM71_006740 PF07670 Nucleoside recognition DYM71_006740 PF07662 Na+ dependent nucleoside transporter C-terminus DYM71_006740 PF01773 Na+ dependent nucleoside transporter N-terminus DYM71_006745 PF01566 Natural resistance-associated macrophage protein DYM71_006750 PF10697 Protein of unknown function (DUF2502) DYM71_006760 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DYM71_006760 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DYM71_006760 PF00205 Thiamine pyrophosphate enzyme, central domain DYM71_006765 PF00654 Voltage gated chloride channel DYM71_006770 PF02685 Glucokinase DYM71_006775 PF00155 Aminotransferase class I and II DYM71_006785 PF03279 Bacterial lipid A biosynthesis acyltransferase DYM71_006790 PF10810 Protein of unknown function (DUF2545) DYM71_006795 PF07690 Major Facilitator Superfamily DYM71_006805 PF00672 HAMP domain DYM71_006805 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYM71_006805 PF00512 His Kinase A (phospho-acceptor) domain DYM71_006810 PF02954 Bacterial regulatory protein, Fis family DYM71_006810 PF14532 Sigma-54 interaction domain DYM71_006810 PF00072 Response regulator receiver domain DYM71_006815 PF01278 Omptin family DYM71_006875 PF04098 Rad52/22 family double-strand break repair protein DYM71_006945 PF00772 DnaB-like helicase N terminal domain DYM71_006945 PF03796 DnaB-like helicase C terminal domain DYM71_007005 PF03589 Antitermination protein DYM71_007015 PF00959 Phage lysozyme DYM71_007020 PF03245 Bacteriophage Rz lysis protein DYM71_007170 PF13356 Arm DNA-binding domain DYM71_007170 PF00589 Phage integrase family DYM71_007170 PF14659 Phage integrase, N-terminal SAM-like domain DYM71_007180 PF01226 Formate/nitrite transporter DYM71_007185 PF04333 MlaA lipoprotein DYM71_007190 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) DYM71_007195 PF04175 Protein of unknown function (DUF406) DYM71_007200 PF00108 Thiolase, N-terminal domain DYM71_007200 PF02803 Thiolase, C-terminal domain DYM71_007205 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain DYM71_007205 PF00378 Enoyl-CoA hydratase/isomerase DYM71_007205 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DYM71_007210 PF00300 Histidine phosphatase superfamily (branch 1) DYM71_007215 PF01713 Smr domain DYM71_007220 PF05175 Methyltransferase small domain DYM71_007225 PF01264 Chorismate synthase DYM71_007230 PF03411 Penicillin-insensitive murein endopeptidase DYM71_007235 PF01925 Sulfite exporter TauE/SafE DYM71_007240 PF04315 Elongation factor P hydroxylase DYM71_007245 PF08891 YfcL protein DYM71_007250 PF05430 S-adenosyl-L-methionine-dependent methyltransferase DYM71_007250 PF01266 FAD dependent oxidoreductase DYM71_007255 PF02801 Beta-ketoacyl synthase, C-terminal domain DYM71_007255 PF00109 Beta-ketoacyl synthase, N-terminal domain DYM71_007260 PF02517 CPBP intramembrane metalloprotease DYM71_007275 PF13693 Winged helix-turn-helix DNA-binding DYM71_007285 PF07690 Major Facilitator Superfamily DYM71_007295 PF11890 Domain of unknown function (DUF3410) DYM71_007295 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DYM71_007295 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DYM71_007300 PF01118 Semialdehyde dehydrogenase, NAD binding domain DYM71_007300 PF02774 Semialdehyde dehydrogenase, dimerisation domain DYM71_007305 PF01416 tRNA pseudouridine synthase DYM71_007310 PF09335 SNARE associated Golgi protein DYM71_007315 PF01039 Carboxyl transferase domain DYM71_007315 PF17848 Acetyl-coA carboxylase zinc finger domain DYM71_007320 PF08245 Mur ligase middle domain DYM71_007320 PF02875 Mur ligase family, glutamate ligase domain DYM71_007325 PF05036 Sporulation related domain DYM71_007330 PF02674 Colicin V production protein DYM71_007335 PF00156 Phosphoribosyl transferase domain DYM71_007340 PF00158 Sigma-54 interaction domain DYM71_007340 PF02954 Bacterial regulatory protein, Fis family DYM71_007340 PF13426 PAS domain DYM71_007345 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain DYM71_007345 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain DYM71_007350 PF13520 Amino acid permease DYM71_007355 PF01168 Alanine racemase, N-terminal domain DYM71_007360 PF00324 Amino acid permease DYM71_007365 PF02441 Flavoprotein DYM71_007370 PF00497 Bacterial extracellular solute-binding proteins, family 3 DYM71_007375 PF00497 Bacterial extracellular solute-binding proteins, family 3 DYM71_007380 PF00528 Binding-protein-dependent transport system inner membrane component DYM71_007385 PF00528 Binding-protein-dependent transport system inner membrane component DYM71_007390 PF00005 ABC transporter DYM71_007395 PF08338 Domain of unknown function (DUF1731) DYM71_007395 PF01370 NAD dependent epimerase/dehydratase family DYM71_007400 PF00043 Glutathione S-transferase, C-terminal domain DYM71_007400 PF02798 Glutathione S-transferase, N-terminal domain DYM71_007405 PF02798 Glutathione S-transferase, N-terminal domain DYM71_007405 PF14834 Glutathione S-transferase, C-terminal domain DYM71_007410 PF12850 Calcineurin-like phosphoesterase superfamily domain DYM71_007415 PF00293 NUDIX domain DYM71_007420 PF00356 Bacterial regulatory proteins, lacI family DYM71_007425 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DYM71_007435 PF03611 PTS system sugar-specific permease component DYM71_007440 PF00456 Transketolase, thiamine diphosphate binding domain DYM71_007445 PF13292 1-deoxy-D-xylulose-5-phosphate synthase DYM71_007445 PF02780 Transketolase, C-terminal domain DYM71_007445 PF02779 Transketolase, pyrimidine binding domain DYM71_007450 PF03606 C4-dicarboxylate anaerobic carrier DYM71_007455 PF01515 Phosphate acetyl/butaryl transferase DYM71_007455 PF07085 DRTGG domain DYM71_007460 PF00871 Acetokinase family DYM71_007465 PF04217 Protein of unknown function, DUF412 DYM71_007470 PF03887 YfbU domain DYM71_007475 PF13419 Haloacid dehalogenase-like hydrolase DYM71_007480 PF03600 Citrate transporter DYM71_007480 PF02080 TrkA-C domain DYM71_007490 PF00155 Aminotransferase class I and II DYM71_007495 PF03466 LysR substrate binding domain DYM71_007495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DYM71_007505 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 DYM71_007510 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit DYM71_007515 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit DYM71_007515 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit DYM71_007525 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit DYM71_007525 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region DYM71_007525 PF10531 SLBB domain DYM71_007530 PF01568 Molydopterin dinucleotide binding domain DYM71_007530 PF00384 Molybdopterin oxidoreductase DYM71_007530 PF04879 Molybdopterin oxidoreductase Fe4S4 domain DYM71_007530 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region DYM71_007535 PF00146 NADH dehydrogenase DYM71_007540 PF12838 4Fe-4S dicluster domain DYM71_007545 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 DYM71_007550 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L DYM71_007555 PF00361 Proton-conducting membrane transporter DYM71_007555 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus DYM71_007560 PF00361 Proton-conducting membrane transporter DYM71_007565 PF00361 Proton-conducting membrane transporter DYM71_007575 PF12034 Domain of unknown function (DUF3520) DYM71_007575 PF12450 von Willebrand factor DYM71_007575 PF00092 von Willebrand factor type A domain DYM71_007580 PF00072 Response regulator receiver domain DYM71_007580 PF01584 CheW-like domain DYM71_007585 PF12706 Beta-lactamase superfamily domain DYM71_007590 PF13673 Acetyltransferase (GNAT) domain DYM71_007595 PF05957 Bacterial protein of unknown function (DUF883) DYM71_007600 PF00425 chorismate binding enzyme DYM71_007605 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DYM71_007605 PF16582 Middle domain of thiamine pyrophosphate DYM71_007605 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DYM71_007610 PF12697 Alpha/beta hydrolase family DYM71_007615 PF00378 Enoyl-CoA hydratase/isomerase DYM71_007620 PF13378 Enolase C-terminal domain-like DYM71_007625 PF00501 AMP-binding enzyme DYM71_007625 PF13193 AMP-binding enzyme C-terminal domain DYM71_007640 PF00892 EamA-like transporter family DYM71_007645 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase DYM71_007650 PF01522 Polysaccharide deacetylase DYM71_007655 PF01370 NAD dependent epimerase/dehydratase family DYM71_007655 PF00551 Formyl transferase DYM71_007655 PF02911 Formyl transferase, C-terminal domain DYM71_007660 PF00535 Glycosyl transferase family 2 DYM71_007665 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family DYM71_007670 PF00300 Histidine phosphatase superfamily (branch 1) DYM71_007675 PF00293 NUDIX domain DYM71_007680 PF07437 YfaZ precursor DYM71_007685 PF00994 Probable molybdopterin binding domain DYM71_007690 PF09339 IclR helix-turn-helix domain DYM71_007690 PF01614 Bacterial transcriptional regulator DYM71_007695 PF13378 Enolase C-terminal domain-like DYM71_007695 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain DYM71_007700 PF07690 Major Facilitator Superfamily DYM71_007705 PF03328 HpcH/HpaI aldolase/citrate lyase family DYM71_007710 PF00994 Probable molybdopterin binding domain DYM71_007720 PF02754 Cysteine-rich domain DYM71_007720 PF13183 4Fe-4S dicluster domain DYM71_007725 PF00890 FAD binding domain DYM71_007730 PF01266 FAD dependent oxidoreductase DYM71_007730 PF04324 BFD-like [2Fe-2S] binding domain DYM71_007735 PF07690 Major Facilitator Superfamily DYM71_007740 PF03009 Glycerophosphoryl diester phosphodiesterase family DYM71_007745 PF03466 LysR substrate binding domain DYM71_007745 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DYM71_007750 PF07690 Major Facilitator Superfamily DYM71_007755 PF00111 2Fe-2S iron-sulfur cluster binding domain DYM71_007760 PF00268 Ribonucleotide reductase, small chain DYM71_007765 PF03477 ATP cone domain DYM71_007765 PF00317 Ribonucleotide reductase, all-alpha domain DYM71_007765 PF02867 Ribonucleotide reductase, barrel domain DYM71_007780 PF07690 Major Facilitator Superfamily DYM71_007785 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain DYM71_007785 PF13378 Enolase C-terminal domain-like DYM71_007790 PF03989 DNA gyrase C-terminal domain, beta-propeller DYM71_007790 PF00521 DNA gyrase/topoisomerase IV, subunit A DYM71_007795 PF09456 RcsC Alpha-Beta-Loop (ABL) DYM71_007795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYM71_007795 PF00512 His Kinase A (phospho-acceptor) domain DYM71_007795 PF00072 Response regulator receiver domain DYM71_007800 PF00196 Bacterial regulatory proteins, luxR family DYM71_007800 PF00072 Response regulator receiver domain DYM71_007805 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYM71_007805 PF01627 Hpt domain DYM71_007805 PF16359 RcsD-ABL domain DYM71_007810 PF00267 Gram-negative porin DYM71_007815 PF02424 ApbE family DYM71_007820 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain DYM71_007820 PF12833 Helix-turn-helix domain DYM71_007820 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain DYM71_007820 PF02805 Metal binding domain of Ada DYM71_007825 PF13532 2OG-Fe(II) oxygenase superfamily DYM71_007830 PF00005 ABC transporter DYM71_007835 PF03974 Ecotin DYM71_007840 PF00037 4Fe-4S binding domain DYM71_007840 PF13187 4Fe-4S dicluster domain DYM71_007840 PF12800 4Fe-4S binding domain DYM71_007845 PF03927 NapD protein DYM71_007850 PF04879 Molybdopterin oxidoreductase Fe4S4 domain DYM71_007850 PF00384 Molybdopterin oxidoreductase DYM71_007850 PF01568 Molydopterin dinucleotide binding domain DYM71_007855 PF12800 4Fe-4S binding domain DYM71_007855 PF12838 4Fe-4S dicluster domain DYM71_007860 PF12801 4Fe-4S binding domain DYM71_007860 PF13237 4Fe-4S dicluster domain DYM71_007865 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) DYM71_007870 PF03264 NapC/NirT cytochrome c family, N-terminal region DYM71_007875 PF00005 ABC transporter DYM71_007880 PF03379 CcmB protein DYM71_007885 PF01578 Cytochrome C assembly protein DYM71_007890 PF04995 Heme exporter protein D (CcmD) DYM71_007895 PF03100 CcmE DYM71_007900 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal DYM71_007900 PF01578 Cytochrome C assembly protein DYM71_007905 PF08534 Redoxin DYM71_007910 PF03918 Cytochrome C biogenesis protein DYM71_007915 PF00196 Bacterial regulatory proteins, luxR family DYM71_007915 PF00072 Response regulator receiver domain DYM71_007935 PF03335 Phage tail fibre repeat DYM71_007935 PF08400 Prophage tail fibre N-terminal DYM71_007935 PF07484 Phage Tail Collar Domain DYM71_007945 PF12468 Type III secretion system leucine rich repeat protein DYM71_007945 PF14496 C-terminal novel E3 ligase, LRR-interacting DYM71_007960 PF11893 Domain of unknown function (DUF3413) DYM71_007960 PF00884 Sulfatase DYM71_007965 PF07208 Protein of unknown function (DUF1414) DYM71_007970 PF04245 37-kD nucleoid-associated bacterial protein DYM71_007980 PF01386 Ribosomal L25p family DYM71_007985 PF00271 Helicase conserved C-terminal domain DYM71_007985 PF04851 Type III restriction enzyme, res subunit DYM71_007990 PF00849 RNA pseudouridylate synthase DYM71_007990 PF01479 S4 domain DYM71_007995 PF07690 Major Facilitator Superfamily DYM71_008000 PF13989 YejG-like protein DYM71_008005 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DYM71_008005 PF00005 ABC transporter DYM71_008010 PF00528 Binding-protein-dependent transport system inner membrane component DYM71_008010 PF12911 N-terminal TM domain of oligopeptide transport permease C DYM71_008015 PF00528 Binding-protein-dependent transport system inner membrane component DYM71_008020 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DYM71_008025 PF00563 EAL domain DYM71_008025 PF12792 CSS motif domain associated with EAL DYM71_008030 PF00877 NlpC/P60 family DYM71_008035 PF01569 PAP2 superfamily DYM71_008040 PF02492 CobW/HypB/UreG, nucleotide-binding domain DYM71_008040 PF07683 Cobalamin synthesis protein cobW C-terminal domain DYM71_008045 PF08207 Elongation factor P (EF-P) KOW-like domain DYM71_008045 PF09285 Elongation factor P, C-terminal DYM71_008045 PF01132 Elongation factor P (EF-P) OB domain DYM71_008050 PF03692 Putative zinc- or iron-chelating domain DYM71_008065 PF07690 Major Facilitator Superfamily DYM71_008070 PF00381 PTS HPr component phosphorylation site DYM71_008070 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DYM71_008075 PF00294 pfkB family carbohydrate kinase DYM71_008080 PF02378 Phosphotransferase system, EIIC DYM71_008080 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DYM71_008085 PF01261 Xylose isomerase-like TIM barrel DYM71_008090 PF03601 Conserved hypothetical protein 698 DYM71_008095 PF03466 LysR substrate binding domain DYM71_008095 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DYM71_008100 PF00324 Amino acid permease DYM71_008105 PF07715 TonB-dependent Receptor Plug Domain DYM71_008105 PF00593 TonB dependent receptor DYM71_008110 PF07690 Major Facilitator Superfamily DYM71_008120 PF03315 Serine dehydratase beta chain DYM71_008120 PF03313 Serine dehydratase alpha chain DYM71_008130 PF00756 Putative esterase DYM71_008135 PF01227 GTP cyclohydrolase I DYM71_008140 PF04235 Protein of unknown function (DUF418) DYM71_008145 PF00356 Bacterial regulatory proteins, lacI family DYM71_008150 PF13407 Periplasmic binding protein domain DYM71_008155 PF00005 ABC transporter DYM71_008160 PF02653 Branched-chain amino acid transport system / permease component DYM71_008165 PF01180 Dihydroorotate dehydrogenase DYM71_008170 PF07992 Pyridine nucleotide-disulphide oxidoreductase DYM71_008170 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster DYM71_008175 PF10808 Protein of unknown function (DUF2542) DYM71_008180 PF02698 DUF218 domain DYM71_008185 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region DYM71_008185 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region DYM71_008190 PF04172 LrgB-like family DYM71_008195 PF03788 LrgA family DYM71_008200 PF03466 LysR substrate binding domain DYM71_008200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DYM71_008205 PF07690 Major Facilitator Superfamily DYM71_008210 PF07883 Cupin domain DYM71_008215 PF01557 Fumarylacetoacetate (FAA) hydrolase family DYM71_008220 PF02798 Glutathione S-transferase, N-terminal domain DYM71_008220 PF14497 Glutathione S-transferase, C-terminal domain DYM71_008225 PF01494 FAD binding domain DYM71_008230 PF01207 Dihydrouridine synthase (Dus) DYM71_008240 PF02321 Outer membrane efflux protein DYM71_008250 PF09335 SNARE associated Golgi protein DYM71_008255 PF04893 Yip1 domain DYM71_008260 PF00768 D-alanyl-D-alanine carboxypeptidase DYM71_008265 PF01565 FAD binding domain DYM71_008265 PF09330 D-lactate dehydrogenase, membrane binding DYM71_008270 PF01915 Glycosyl hydrolase family 3 C-terminal domain DYM71_008270 PF14310 Fibronectin type III-like domain DYM71_008270 PF00933 Glycosyl hydrolase family 3 N terminal domain DYM71_008275 PF04069 Substrate binding domain of ABC-type glycine betaine transport system DYM71_008280 PF00528 Binding-protein-dependent transport system inner membrane component DYM71_008285 PF00005 ABC transporter DYM71_008290 PF00528 Binding-protein-dependent transport system inner membrane component DYM71_008300 PF13411 MerR HTH family regulatory protein DYM71_008305 PF07694 5TMR of 5TMR-LYT DYM71_008305 PF06580 Histidine kinase DYM71_008310 PF00072 Response regulator receiver domain DYM71_008310 PF04397 LytTr DNA-binding domain DYM71_008315 PF07308 Protein of unknown function (DUF1456) DYM71_008320 PF06998 Protein of unknown function (DUF1307) DYM71_008325 PF06998 Protein of unknown function (DUF1307) DYM71_008330 PF09334 tRNA synthetases class I (M) DYM71_008330 PF01588 Putative tRNA binding domain DYM71_008335 PF10609 NUBPL iron-transfer P-loop NTPase DYM71_008350 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain DYM71_008350 PF02753 Pili assembly chaperone PapD, C-terminal domain DYM71_008355 PF13954 PapC N-terminal domain DYM71_008355 PF13953 PapC C-terminal domain DYM71_008355 PF00577 Outer membrane usher protein DYM71_008365 PF11776 Nickel/cobalt transporter regulator DYM71_008370 PF02110 Hydroxyethylthiazole kinase family DYM71_008375 PF08543 Phosphomethylpyrimidine kinase DYM71_008380 PF07702 UTRA domain DYM71_008380 PF00392 Bacterial regulatory proteins, gntR family DYM71_008385 PF00294 pfkB family carbohydrate kinase DYM71_008390 PF03747 ADP-ribosylglycohydrolase DYM71_008395 PF03825 Nucleoside H+ symporter DYM71_008400 PF01791 DeoC/LacD family aldolase DYM71_008405 PF00781 Diacylglycerol kinase catalytic domain DYM71_008415 PF05932 Tir chaperone protein (CesT) family DYM71_008445 PF00486 Transcriptional regulatory protein, C terminal DYM71_008445 PF00072 Response regulator receiver domain DYM71_008450 PF00672 HAMP domain DYM71_008450 PF00512 His Kinase A (phospho-acceptor) domain DYM71_008450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYM71_008455 PF07690 Major Facilitator Superfamily DYM71_008460 PF00873 AcrB/AcrD/AcrF family DYM71_008465 PF00873 AcrB/AcrD/AcrF family DYM71_008470 PF13533 Biotin-lipoyl like DYM71_008480 PF00012 Hsp70 protein DYM71_008485 PF00730 HhH-GPD superfamily base excision DNA repair protein DYM71_008485 PF06029 AlkA N-terminal domain DYM71_008490 PF08447 PAS fold DYM71_008490 PF00990 Diguanylate cyclase, GGDEF domain DYM71_008490 PF00563 EAL domain DYM71_008490 PF13426 PAS domain DYM71_008490 PF05231 MASE1 DYM71_008490 PF08448 PAS fold DYM71_008495 PF00485 Phosphoribulokinase / Uridine kinase family DYM71_008500 PF00692 dUTPase DYM71_008505 PF05170 AsmA family DYM71_008510 PF00571 CBS domain DYM71_008510 PF03471 Transporter associated domain DYM71_008510 PF03741 Integral membrane protein TerC family DYM71_008515 PF10531 SLBB domain DYM71_008515 PF02563 Polysaccharide biosynthesis/export protein DYM71_008515 PF18412 Outer-membrane lipoprotein Wza C-terminal domain DYM71_008520 PF01451 Low molecular weight phosphotyrosine protein phosphatase DYM71_008525 PF02706 Chain length determinant protein DYM71_008525 PF13807 G-rich domain on putative tyrosine kinase DYM71_008525 PF13614 AAA domain DYM71_008530 PF00535 Glycosyl transferase family 2 DYM71_008535 PF00132 Bacterial transferase hexapeptide (six repeats) DYM71_008540 PF13439 Glycosyltransferase Family 4 DYM71_008540 PF00534 Glycosyl transferases group 1 DYM71_008550 PF00535 Glycosyl transferase family 2 DYM71_008555 PF00132 Bacterial transferase hexapeptide (six repeats) DYM71_008560 PF16363 GDP-mannose 4,6 dehydratase DYM71_008565 PF01370 NAD dependent epimerase/dehydratase family DYM71_008570 PF00293 NUDIX domain DYM71_008575 PF13579 Glycosyl transferase 4-like domain DYM71_008575 PF00534 Glycosyl transferases group 1 DYM71_008580 PF00483 Nucleotidyl transferase DYM71_008580 PF01050 Mannose-6-phosphate isomerase DYM71_008585 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DYM71_008585 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DYM71_008585 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DYM71_008585 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DYM71_008590 PF02397 Bacterial sugar transferase DYM71_008600 PF04230 Polysaccharide pyruvyl transferase DYM71_008605 PF00534 Glycosyl transferases group 1 DYM71_008605 PF13439 Glycosyltransferase Family 4 DYM71_008615 PF00483 Nucleotidyl transferase DYM71_008630 PF09318 Glycosyl transferase 1 domain A DYM71_008630 PF00534 Glycosyl transferases group 1 DYM71_008640 PF00483 Nucleotidyl transferase DYM71_008640 PF01050 Mannose-6-phosphate isomerase DYM71_008645 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DYM71_008645 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DYM71_008645 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DYM71_008645 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DYM71_008655 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase DYM71_008655 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain DYM71_008660 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain DYM71_008660 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain DYM71_008665 PF02706 Chain length determinant protein DYM71_008670 PF01502 Phosphoribosyl-AMP cyclohydrolase DYM71_008670 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase DYM71_008675 PF00977 Histidine biosynthesis protein DYM71_008680 PF00977 Histidine biosynthesis protein DYM71_008685 PF00117 Glutamine amidotransferase class-I DYM71_008690 PF00475 Imidazoleglycerol-phosphate dehydratase DYM71_008695 PF00155 Aminotransferase class I and II DYM71_008700 PF00815 Histidinol dehydrogenase DYM71_008705 PF08029 HisG, C-terminal domain DYM71_008705 PF01634 ATP phosphoribosyltransferase DYM71_008715 PF01370 NAD dependent epimerase/dehydratase family DYM71_008720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DYM71_008720 PF03466 LysR substrate binding domain DYM71_008730 PF13520 Amino acid permease DYM71_008735 PF08411 Exonuclease C-terminal DYM71_008735 PF00929 Exonuclease DYM71_008740 PF13979 SopA-like catalytic domain DYM71_008740 PF13981 SopA-like central domain DYM71_008750 PF00384 Molybdopterin oxidoreductase DYM71_008750 PF04879 Molybdopterin oxidoreductase Fe4S4 domain DYM71_008750 PF01568 Molydopterin dinucleotide binding domain DYM71_008755 PF12800 4Fe-4S binding domain DYM71_008755 PF13247 4Fe-4S dicluster domain DYM71_008760 PF01292 Prokaryotic cytochrome b561 DYM71_008765 PF00768 D-alanyl-D-alanine carboxypeptidase DYM71_008765 PF07943 Penicillin-binding protein 5, C-terminal domain DYM71_008770 PF06445 GyrI-like small molecule binding domain DYM71_008775 PF04632 Fusaric acid resistance protein family DYM71_008780 PF04363 Protein of unknown function (DUF496) DYM71_008785 PF00288 GHMP kinases N terminal domain DYM71_008790 PF00871 Acetokinase family DYM71_008795 PF10662 Ethanolamine utilisation - propanediol utilisation DYM71_008800 PF00936 BMC domain DYM71_008810 PF13375 RnfC Barrel sandwich hybrid domain DYM71_008810 PF10531 SLBB domain DYM71_008810 PF12838 4Fe-4S dicluster domain DYM71_008810 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit DYM71_008815 PF00465 Iron-containing alcohol dehydrogenase DYM71_008815 PF00171 Aldehyde dehydrogenase family DYM71_008820 PF00171 Aldehyde dehydrogenase family DYM71_008825 PF01923 Cobalamin adenosyltransferase DYM71_008830 PF03319 Ethanolamine utilisation protein EutN/carboxysome DYM71_008840 PF06130 Phosphate propanoyltransferase DYM71_008845 PF00936 BMC domain DYM71_008850 PF00936 BMC domain DYM71_008860 PF08841 Diol dehydratase reactivase ATPase-like domain DYM71_008860 PF18427 DD-reactivating factor swiveling domain DYM71_008865 PF02287 Dehydratase small subunit DYM71_008870 PF02288 Dehydratase medium subunit DYM71_008875 PF02286 Dehydratase large subunit DYM71_008880 PF00936 BMC domain DYM71_008885 PF00936 BMC domain DYM71_008890 PF00230 Major intrinsic protein DYM71_008895 PF12833 Helix-turn-helix domain DYM71_008895 PF10114 Sensory domain found in PocR DYM71_008900 PF07685 CobB/CobQ-like glutamine amidotransferase domain DYM71_008900 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain DYM71_008905 PF03186 CobD/Cbib protein DYM71_008910 PF02570 Precorrin-8X methylmutase DYM71_008915 PF01888 CbiD DYM71_008920 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DYM71_008925 PF05175 Methyltransferase small domain DYM71_008930 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DYM71_008935 PF11761 Cobalamin biosynthesis central region DYM71_008935 PF01890 Cobalamin synthesis G C-terminus DYM71_008935 PF11760 Cobalamin synthesis G N-terminal DYM71_008940 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DYM71_008945 PF02571 Precorrin-6x reductase CbiJ/CobK DYM71_008950 PF06180 Cobalt chelatase (CbiK) DYM71_008955 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DYM71_008960 PF01891 Cobalt uptake substrate-specific transmembrane region DYM71_008965 PF02553 Cobalt transport protein component CbiN DYM71_008970 PF02361 Cobalt transport protein DYM71_008975 PF00005 ABC transporter DYM71_008980 PF07685 CobB/CobQ-like glutamine amidotransferase domain DYM71_008985 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase DYM71_008990 PF02654 Cobalamin-5-phosphate synthase DYM71_008995 PF02277 Phosphoribosyltransferase DYM71_009000 PF17969 L,D-transpeptidase C-terminal domain DYM71_009000 PF03734 L,D-transpeptidase catalytic domain DYM71_009010 PF01554 MatE DYM71_009035 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus DYM71_009035 PF01048 Phosphorylase superfamily DYM71_009045 PF13614 AAA domain DYM71_009050 PF01555 DNA methylase DYM71_009080 PF06167 Glucose-regulated metallo-peptidase M90 DYM71_009095 PF00717 Peptidase S24-like DYM71_009100 PF13438 Domain of unknown function (DUF4113) DYM71_009100 PF11799 impB/mucB/samB family C-terminal domain DYM71_009100 PF00817 impB/mucB/samB family DYM71_009105 PF00313 'Cold-shock' DNA-binding domain DYM71_009115 PF00267 Gram-negative porin DYM71_009125 PF01966 HD domain DYM71_009130 PF00145 C-5 cytosine-specific DNA methylase DYM71_009130 PF18284 DNA methylase N-terminal domain DYM71_009135 PF03852 DNA mismatch endonuclease Vsr DYM71_009140 PF00892 EamA-like transporter family DYM71_009145 PF05661 Protein of unknown function (DUF808) DYM71_009150 PF09926 Uncharacterized small protein (DUF2158) DYM71_009155 PF00990 Diguanylate cyclase, GGDEF domain DYM71_009155 PF17151 Periplasmic sensor domain DYM71_009165 PF10733 Protein of unknown function (DUF2525) DYM71_009170 PF10781 Dextransucrase DSRB DYM71_009175 PF00196 Bacterial regulatory proteins, luxR family DYM71_009180 PF01311 Bacterial export proteins, family 1 DYM71_009185 PF01313 Bacterial export proteins, family 3 DYM71_009190 PF00813 FliP family DYM71_009195 PF04347 Flagellar biosynthesis protein, FliO DYM71_009200 PF16973 Flagellar motor switch protein FliN N-terminal DYM71_009200 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term DYM71_009205 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term DYM71_009205 PF02154 Flagellar motor switch protein FliM DYM71_009210 PF03748 Flagellar basal body-associated protein FliL DYM71_009215 PF02120 Flagellar hook-length control protein FliK DYM71_009220 PF02050 Flagellar FliJ protein DYM71_009225 PF18269 T3SS EscN ATPase C-terminal domain DYM71_009225 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DYM71_009230 PF02108 Flagellar assembly protein FliH DYM71_009235 PF01706 FliG C-terminal domain DYM71_009235 PF14842 FliG N-terminal domain DYM71_009235 PF14841 FliG middle domain DYM71_009240 PF08345 Flagellar M-ring protein C-terminal DYM71_009240 PF01514 Secretory protein of YscJ/FliF family DYM71_009245 PF02049 Flagellar hook-basal body complex protein FliE DYM71_009255 PF01206 Sulfurtransferase TusA DYM71_009260 PF04143 Sulphur transport DYM71_009265 PF13987 YedD-like protein DYM71_009270 PF00128 Alpha amylase, catalytic domain DYM71_009270 PF02806 Alpha amylase, C-terminal all-beta domain DYM71_009275 PF05400 Flagellar protein FliT DYM71_009280 PF02561 Flagellar protein FliS DYM71_009285 PF07196 Flagellin hook IN motif DYM71_009285 PF07195 Flagellar hook-associated protein 2 C-terminus DYM71_009285 PF02465 Flagellar hook-associated protein 2 N-terminus DYM71_009290 PF00700 Bacterial flagellin C-terminal helical region DYM71_009290 PF00669 Bacterial flagellin N-terminal helical region DYM71_009290 PF08884 Flagellin D3 domain DYM71_009300 PF04539 Sigma-70 region 3 DYM71_009300 PF04542 Sigma-70 region 2 DYM71_009300 PF04545 Sigma-70, region 4 DYM71_009305 PF02899 Phage integrase, N-terminal SAM-like domain DYM71_009315 PF00291 Pyridoxal-phosphate dependent enzyme DYM71_009330 PF00196 Bacterial regulatory proteins, luxR family DYM71_009330 PF03472 Autoinducer binding domain DYM71_009335 PF10769 Protein of unknown function (DUF2594) DYM71_009345 PF00072 Response regulator receiver domain DYM71_009345 PF00196 Bacterial regulatory proteins, luxR family DYM71_009350 PF02151 UvrB/uvrC motif DYM71_009350 PF08459 UvrC Helix-hairpin-helix N-terminal DYM71_009350 PF01541 GIY-YIG catalytic domain DYM71_009355 PF01066 CDP-alcohol phosphatidyltransferase DYM71_009390 PF03695 Uncharacterised protein family (UPF0149) DYM71_009390 PF02810 SEC-C motif DYM71_009395 PF03222 Tryptophan/tyrosine permease family DYM71_009400 PF10678 Protein of unknown function (DUF2492) DYM71_009405 PF00210 Ferritin-like domain DYM71_009410 PF13992 YecR-like lipoprotein DYM71_009420 PF00210 Ferritin-like domain DYM71_009435 PF02358 Trehalose-phosphatase DYM71_009440 PF00982 Glycosyltransferase family 20 DYM71_009445 PF00582 Universal stress protein family DYM71_009455 PF05247 Flagellar transcriptional activator (FlhD) DYM71_009460 PF05280 Flagellar transcriptional activator (FlhC) DYM71_009465 PF01618 MotA/TolQ/ExbB proton channel family DYM71_009470 PF13677 Membrane MotB of proton-channel complex MotA/MotB DYM71_009470 PF00691 OmpA family DYM71_009475 PF02895 Signal transducing histidine kinase, homodimeric domain DYM71_009475 PF01627 Hpt domain DYM71_009475 PF01584 CheW-like domain DYM71_009475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYM71_009475 PF09078 CheY binding DYM71_009480 PF01584 CheW-like domain DYM71_009485 PF00672 HAMP domain DYM71_009485 PF02203 Tar ligand binding domain homologue DYM71_009485 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DYM71_009490 PF01739 CheR methyltransferase, SAM binding domain DYM71_009490 PF03705 CheR methyltransferase, all-alpha domain DYM71_009495 PF01339 CheB methylesterase DYM71_009495 PF00072 Response regulator receiver domain DYM71_009500 PF00072 Response regulator receiver domain DYM71_009505 PF04344 Chemotaxis phosphatase, CheZ DYM71_009510 PF01312 FlhB HrpN YscU SpaS Family DYM71_009515 PF00771 FHIPEP family DYM71_009520 PF06366 Flagellar protein FlhE DYM71_009525 PF07470 Glycosyl Hydrolase Family 88 DYM71_009530 PF00905 Penicillin binding protein transpeptidase domain DYM71_009530 PF03717 Penicillin-binding Protein dimerisation domain DYM71_009535 PF03485 Arginyl tRNA synthetase N terminal domain DYM71_009535 PF00750 tRNA synthetases class I (R) DYM71_009535 PF05746 DALR anticodon binding domain DYM71_009540 PF06185 YecM protein DYM71_009545 PF03932 CutC family DYM71_009550 PF08003 Protein of unknown function (DUF1698) DYM71_009555 PF13649 Methyltransferase domain DYM71_009560 PF01124 MAPEG family DYM71_009565 PF01904 Protein of unknown function DUF72 DYM71_009570 PF00857 Isochorismatase family DYM71_009575 PF01336 OB-fold nucleic acid binding domain DYM71_009575 PF02938 GAD domain DYM71_009575 PF00152 tRNA synthetases class II (D, K and N) DYM71_009580 PF00293 NUDIX domain DYM71_009585 PF01709 Transcriptional regulator DYM71_009590 PF02075 Crossover junction endodeoxyribonuclease RuvC DYM71_009595 PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family DYM71_009610 PF01330 RuvA N terminal domain DYM71_009610 PF07499 RuvA, C-terminal domain DYM71_009615 PF05496 Holliday junction DNA helicase RuvB P-loop domain DYM71_009615 PF05491 RuvB C-terminal winged helix domain DYM71_009615 PF17864 RuvB AAA lid domain DYM71_009620 PF00950 ABC 3 transport family DYM71_009625 PF00005 ABC transporter DYM71_009630 PF01297 Zinc-uptake complex component A periplasmic DYM71_009635 PF01476 LysM domain DYM71_009635 PF01551 Peptidase family M23 DYM71_009635 PF08525 Opacity-associated protein A N-terminal motif DYM71_009640 PF03279 Bacterial lipid A biosynthesis acyltransferase DYM71_009645 PF02887 Pyruvate kinase, alpha/beta domain DYM71_009645 PF00224 Pyruvate kinase, barrel domain DYM71_009650 PF01380 SIS domain DYM71_009650 PF01418 Helix-turn-helix domain, rpiR family DYM71_009655 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain DYM71_009655 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain DYM71_009660 PF00920 Dehydratase family DYM71_009665 PF01081 KDPG and KHG aldolase DYM71_009670 PF02222 ATP-grasp domain DYM71_009675 PF07130 YebG protein DYM71_009680 PF13995 YebF-like protein DYM71_009685 PF04391 Protein of unknown function (DUF533) DYM71_009690 PF00326 Prolyl oligopeptidase family DYM71_009690 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain DYM71_009695 PF00929 Exonuclease DYM71_009700 PF00795 Carbon-nitrogen hydrolase DYM71_009705 PF06440 DNA polymerase III, theta subunit DYM71_009710 PF04234 CopC domain DYM71_009715 PF05425 Copper resistance protein D DYM71_009720 PF10709 Protein of unknown function (DUF2511) DYM71_009725 PF09003 Bacteriophage lambda integrase, Arm DNA-binding domain DYM71_009725 PF00589 Phage integrase family DYM71_009730 PF06630 Enterobacterial exodeoxyribonuclease VIII DYM71_009730 PF12684 PDDEXK-like domain of unknown function (DUF3799) DYM71_009740 PF10721 Protein of unknown function (DUF2514) DYM71_009760 PF02413 Caudovirales tail fibre assembly protein, lambda gpK DYM71_009770 PF02040 Arsenical pump membrane protein DYM71_009795 PF00892 EamA-like transporter family DYM71_009805 PF00872 Transposase, Mutator family DYM71_009820 PF00583 Acetyltransferase (GNAT) family DYM71_009830 PF07166 Protein of unknown function (DUF1398) DYM71_009835 PF05364 Salmonella type III secretion SopE effector N-terminus DYM71_009835 PF07487 SopE GEF domain DYM71_009845 PF00149 Calcineurin-like phosphoesterase DYM71_009850 PF07358 Protein of unknown function (DUF1482) DYM71_009855 PF07351 Protein of unknown function (DUF1480) DYM71_009860 PF01189 16S rRNA methyltransferase RsmB/F DYM71_009860 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF DYM71_009860 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF DYM71_009865 PF02470 MlaD protein DYM71_009870 PF04403 Paraquat-inducible protein A DYM71_009875 PF13185 GAF domain DYM71_009880 PF17516 ProQ C-terminal domain DYM71_009880 PF04352 ProQ/FINO family DYM71_009885 PF00595 PDZ domain DYM71_009885 PF03572 Peptidase family S41 DYM71_009885 PF11818 C-terminal domain of tail specific protease (DUF3340) DYM71_009885 PF17804 Tail specific protease N-terminal domain DYM71_009890 PF01435 Peptidase family M48 DYM71_009895 PF07690 Major Facilitator Superfamily DYM71_009900 PF01614 Bacterial transcriptional regulator DYM71_009900 PF09339 IclR helix-turn-helix domain DYM71_009905 PF13996 YobH-like protein DYM71_009910 PF13998 MgrB protein DYM71_009915 PF13974 YebO-like protein DYM71_009920 PF10736 Protein of unknown function (DUF2627) DYM71_009925 PF00313 'Cold-shock' DNA-binding domain DYM71_009930 PF03717 Penicillin-binding Protein dimerisation domain DYM71_009930 PF00905 Penicillin binding protein transpeptidase domain DYM71_009935 PF13847 Methyltransferase domain DYM71_009940 PF02659 Putative manganese efflux pump DYM71_009945 PF06173 Protein of unknown function (DUF986) DYM71_009950 PF03613 PTS system mannose/fructose/sorbose family IID component DYM71_009955 PF03609 PTS system sorbose-specific iic component DYM71_009960 PF03610 PTS system fructose IIA component DYM71_009960 PF03830 PTS system sorbose subfamily IIB component DYM71_009965 PF03471 Transporter associated domain DYM71_009965 PF03741 Integral membrane protein TerC family DYM71_009970 PF00563 EAL domain DYM71_009970 PF12792 CSS motif domain associated with EAL DYM71_009975 PF03313 Serine dehydratase alpha chain DYM71_009975 PF03315 Serine dehydratase beta chain DYM71_009980 PF00293 NUDIX domain DYM71_009985 PF00425 chorismate binding enzyme DYM71_009985 PF04715 Anthranilate synthase component I, N terminal region DYM71_009990 PF03701 Uncharacterised protein family (UPF0181) DYM71_009995 PF01042 Endoribonuclease L-PSP DYM71_010000 PF13307 Helicase C-terminal domain DYM71_010000 PF04851 Type III restriction enzyme, res subunit DYM71_010005 PF00814 Glycoprotease family DYM71_010010 PF03843 Outer membrane lipoprotein Slp family DYM71_010015 PF13193 AMP-binding enzyme C-terminal domain DYM71_010015 PF00501 AMP-binding enzyme DYM71_010020 PF01612 3'-5' exonuclease DYM71_010020 PF00570 HRDC domain DYM71_010025 PF03776 Septum formation topological specificity factor MinE DYM71_010030 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain DYM71_010035 PF03775 Septum formation inhibitor MinC, C-terminal domain DYM71_010035 PF05209 Septum formation inhibitor MinC, N-terminal domain DYM71_010040 PF05166 YcgL domain DYM71_010045 PF01557 Fumarylacetoacetate (FAA) hydrolase family DYM71_010050 PF03692 Putative zinc- or iron-chelating domain DYM71_010060 PF08178 GnsA/GnsB toxin of bacterial toxin-antitoxin system DYM71_010070 PF02600 Disulfide bond formation protein DsbB DYM71_010075 PF06450 Bacterial Na+/H+ antiporter B (NhaB) DYM71_010080 PF00392 Bacterial regulatory proteins, gntR family DYM71_010080 PF07840 FadR C-terminal domain DYM71_010085 PF04293 SpoVR like protein DYM71_010090 PF01266 FAD dependent oxidoreductase DYM71_010095 PF01168 Alanine racemase, N-terminal domain DYM71_010095 PF00842 Alanine racemase, C-terminal domain DYM71_010100 PF03471 Transporter associated domain DYM71_010100 PF00999 Sodium/hydrogen exchanger family DYM71_010100 PF02080 TrkA-C domain DYM71_010105 PF02016 LD-carboxypeptidase N-terminal domain DYM71_010105 PF17676 LD-carboxypeptidase C-terminal domain DYM71_010110 PF01464 Transglycosylase SLT domain DYM71_010115 PF07317 Flagellar regulator YcgR DYM71_010115 PF07238 PilZ domain DYM71_010120 PF04226 Transglycosylase associated protein DYM71_010125 PF01204 Trehalase DYM71_010130 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase DYM71_010130 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain DYM71_010135 PF08173 Membrane bound YbgT-like protein DYM71_010140 PF02322 Cytochrome bd terminal oxidase subunit II DYM71_010145 PF01654 Cytochrome bd terminal oxidase subunit I DYM71_010150 PF04809 HupH hydrogenase expression protein, C-terminal conserved region DYM71_010155 PF07449 Hydrogenase-1 expression protein HyaE DYM71_010160 PF01750 Hydrogenase maturation protease DYM71_010165 PF01292 Prokaryotic cytochrome b561 DYM71_010170 PF00374 Nickel-dependent hydrogenase DYM71_010175 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit DYM71_010175 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal DYM71_010190 PF06071 Protein of unknown function (DUF933) DYM71_010190 PF01926 50S ribosome-binding GTPase DYM71_010195 PF01195 Peptidyl-tRNA hydrolase DYM71_010200 PF10762 Protein of unknown function (DUF2583) DYM71_010205 PF01740 STAS domain DYM71_010205 PF00916 Sulfate permease family DYM71_010210 PF14572 Phosphoribosyl synthetase-associated domain DYM71_010210 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase DYM71_010215 PF00288 GHMP kinases N terminal domain DYM71_010215 PF08544 GHMP kinases C terminal DYM71_010220 PF03550 Outer membrane lipoprotein LolB DYM71_010225 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain DYM71_010225 PF01488 Shikimate / quinate 5-dehydrogenase DYM71_010225 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain DYM71_010230 PF00472 RF-1 domain DYM71_010230 PF03462 PCRF domain DYM71_010235 PF17827 PrmC N-terminal domain DYM71_010235 PF13847 Methyltransferase domain DYM71_010240 PF04247 Invasion gene expression up-regulator, SirB DYM71_010245 PF13369 Transglutaminase-like superfamily DYM71_010250 PF00793 DAHP synthetase I family DYM71_010255 PF01699 Sodium/calcium exchanger protein DYM71_010260 PF06150 ChaB DYM71_010265 PF02635 DsrE/DsrF-like family DYM71_010270 PF11924 Inverse autotransporter, beta-domain DYM71_010275 PF00196 Bacterial regulatory proteins, luxR family DYM71_010275 PF00072 Response regulator receiver domain DYM71_010280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYM71_010280 PF00672 HAMP domain DYM71_010280 PF07730 Histidine kinase DYM71_010280 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term DYM71_010285 PF07690 Major Facilitator Superfamily DYM71_010290 PF00384 Molybdopterin oxidoreductase DYM71_010290 PF01568 Molydopterin dinucleotide binding domain DYM71_010290 PF14710 Respiratory nitrate reductase alpha N-terminal DYM71_010295 PF13247 4Fe-4S dicluster domain DYM71_010295 PF14711 Respiratory nitrate reductase beta C-terminal DYM71_010300 PF02613 Nitrate reductase delta subunit DYM71_010305 PF02665 Nitrate reductase gamma subunit DYM71_010345 PF00551 Formyl transferase DYM71_010345 PF01842 ACT domain DYM71_010350 PF02810 SEC-C motif DYM71_010355 PF01734 Patatin-like phospholipase DYM71_010360 PF00072 Response regulator receiver domain DYM71_010365 PF00483 Nucleotidyl transferase DYM71_010370 PF00816 H-NS histone family DYM71_010375 PF00265 Thymidine kinase DYM71_010380 PF00171 Aldehyde dehydrogenase family DYM71_010380 PF00465 Iron-containing alcohol dehydrogenase DYM71_010385 PF01914 MarC family integral membrane protein DYM71_010390 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DYM71_010395 PF00528 Binding-protein-dependent transport system inner membrane component DYM71_010400 PF00528 Binding-protein-dependent transport system inner membrane component DYM71_010400 PF12911 N-terminal TM domain of oligopeptide transport permease C DYM71_010405 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DYM71_010405 PF00005 ABC transporter DYM71_010410 PF00005 ABC transporter DYM71_010410 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DYM71_010415 PF00027 Cyclic nucleotide-binding domain DYM71_010415 PF00520 Ion transport protein DYM71_010420 PF04269 Protein of unknown function, DUF440 DYM71_010425 PF13396 Phospholipase_D-nuclease N-terminal DYM71_010425 PF13091 PLD-like domain DYM71_010435 PF03795 YCII-related domain DYM71_010440 PF03544 Gram-negative bacterial TonB protein C-terminal DYM71_010445 PF03061 Thioesterase superfamily DYM71_010450 PF04279 Intracellular septation protein A DYM71_010460 PF03692 Putative zinc- or iron-chelating domain DYM71_010465 PF03922 OmpW family DYM71_010475 PF05974 Domain of unknown function (DUF892) DYM71_010480 PF05974 Domain of unknown function (DUF892) DYM71_010485 PF10685 Stress-induced bacterial acidophilic repeat motif DYM71_010490 PF00290 Tryptophan synthase alpha chain DYM71_010495 PF00291 Pyridoxal-phosphate dependent enzyme DYM71_010500 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase DYM71_010500 PF00218 Indole-3-glycerol phosphate synthase DYM71_010505 PF00117 Glutamine amidotransferase class-I DYM71_010505 PF00591 Glycosyl transferase family, a/b domain DYM71_010505 PF02885 Glycosyl transferase family, helical bundle domain DYM71_010510 PF04715 Anthranilate synthase component I, N terminal region DYM71_010510 PF00425 chorismate binding enzyme DYM71_010515 PF08255 Trp-operon Leader Peptide DYM71_010520 PF02811 PHP domain DYM71_010525 PF01300 Telomere recombination DYM71_010530 PF01479 S4 domain DYM71_010530 PF00849 RNA pseudouridylate synthase DYM71_010535 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP DYM71_010540 PF00106 short chain dehydrogenase DYM71_010545 PF08496 Peptidase family S49 N-terminal DYM71_010545 PF01343 Peptidase family S49 DYM71_010550 PF10692 Protein of unknown function (DUF2498) DYM71_010555 PF01131 DNA topoisomerase DYM71_010555 PF01751 Toprim domain DYM71_010555 PF01396 Topoisomerase DNA binding C4 zinc finger DYM71_010555 PF08272 Topoisomerase I zinc-ribbon-like DYM71_010560 PF03466 LysR substrate binding domain DYM71_010560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DYM71_010570 PF00330 Aconitase family (aconitate hydratase) DYM71_010570 PF00694 Aconitase C-terminal domain DYM71_010575 PF00925 GTP cyclohydrolase II DYM71_010580 PF01569 PAP2 superfamily DYM71_010585 PF06305 Lipopolysaccharide assembly protein A domain DYM71_010590 PF18073 Rubredoxin metal binding domain DYM71_010595 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family DYM71_010600 PF01253 Translation initiation factor SUI1 DYM71_010605 PF05433 Glycine zipper 2TM domain DYM71_010610 PF00455 DeoR C terminal sensor domain DYM71_010610 PF08220 DeoR-like helix-turn-helix domain DYM71_010620 PF00563 EAL domain DYM71_010620 PF00990 Diguanylate cyclase, GGDEF domain DYM71_010620 PF13426 PAS domain DYM71_010625 PF00575 S1 RNA binding domain DYM71_010625 PF17876 Cold shock domain DYM71_010625 PF08206 Ribonuclease B OB domain DYM71_010625 PF00773 RNB domain DYM71_010660 PF00005 ABC transporter DYM71_010665 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DYM71_010665 PF00005 ABC transporter DYM71_010670 PF12911 N-terminal TM domain of oligopeptide transport permease C DYM71_010670 PF00528 Binding-protein-dependent transport system inner membrane component DYM71_010675 PF00528 Binding-protein-dependent transport system inner membrane component DYM71_010680 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DYM71_010685 PF02954 Bacterial regulatory protein, Fis family DYM71_010685 PF00158 Sigma-54 interaction domain DYM71_010690 PF04012 PspA/IM30 family DYM71_010695 PF06667 Phage shock protein B DYM71_010700 PF04024 PspC domain DYM71_010705 PF09584 Phage shock protein PspD (Phageshock_PspD) DYM71_010710 PF00581 Rhodanese-like domain DYM71_010715 PF04317 YcjX-like family, DUF463 DYM71_010720 PF05128 Domain of unknown function (DUF697) DYM71_010725 PF00158 Sigma-54 interaction domain DYM71_010725 PF18024 Helix-turn-helix domain DYM71_010730 PF08534 Redoxin DYM71_010735 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain DYM71_010735 PF13378 Enolase C-terminal domain-like DYM71_010740 PF00246 Zinc carboxypeptidase DYM71_010745 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DYM71_010755 PF03466 LysR substrate binding domain DYM71_010755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DYM71_010760 PF00248 Aldo/keto reductase family DYM71_010770 PF00440 Bacterial regulatory proteins, tetR family DYM71_010785 PF06445 GyrI-like small molecule binding domain DYM71_010785 PF12833 Helix-turn-helix domain DYM71_010805 PF08534 Redoxin DYM71_010825 PF00924 Mechanosensitive ion channel DYM71_010830 PF10749 Protein of unknown function (DUF2534) DYM71_010835 PF00582 Universal stress protein family DYM71_010840 PF13545 Crp-like helix-turn-helix domain DYM71_010840 PF00027 Cyclic nucleotide-binding domain DYM71_010845 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain DYM71_010845 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain DYM71_010850 PF01713 Smr domain DYM71_010855 PF02203 Tar ligand binding domain homologue DYM71_010855 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DYM71_010855 PF00672 HAMP domain DYM71_010860 PF01544 CorA-like Mg2+ transporter protein DYM71_010865 PF03880 DbpA RNA binding domain DYM71_010865 PF00270 DEAD/DEAH box helicase DYM71_010865 PF00271 Helicase conserved C-terminal domain DYM71_010870 PF01171 PP-loop family DYM71_010880 PF00893 Small Multidrug Resistance protein DYM71_010885 PF00582 Universal stress protein family DYM71_010890 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DYM71_010890 PF10371 Domain of unknown function DYM71_010890 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II DYM71_010890 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg DYM71_010890 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase DYM71_010900 PF03891 Domain of unknown function (DUF333) DYM71_010905 PF03724 META domain DYM71_010910 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DYM71_010910 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DYM71_010915 PF11739 Dicarboxylate transport DYM71_010920 PF13617 YnbE-like lipoprotein DYM71_010925 PF07027 Protein of unknown function (DUF1318) DYM71_010935 PF02525 Flavodoxin-like fold DYM71_010940 PF00270 DEAD/DEAH box helicase DYM71_010940 PF00271 Helicase conserved C-terminal domain DYM71_010940 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold DYM71_010940 PF04408 Helicase associated domain (HA2) DYM71_010940 PF11898 Domain of unknown function (DUF3418) DYM71_010945 PF02698 DUF218 domain DYM71_010950 PF01292 Prokaryotic cytochrome b561 DYM71_010955 PF08242 Methyltransferase domain DYM71_010965 PF00528 Binding-protein-dependent transport system inner membrane component DYM71_010970 PF00005 ABC transporter DYM71_010975 PF00528 Binding-protein-dependent transport system inner membrane component DYM71_010980 PF00497 Bacterial extracellular solute-binding proteins, family 3 DYM71_010990 PF06767 Sif protein DYM71_010990 PF00657 GDSL-like Lipase/Acylhydrolase DYM71_011005 PF02583 Metal-sensitive transcriptional repressor DYM71_011010 PF08240 Alcohol dehydrogenase GroES-like domain DYM71_011010 PF00107 Zinc-binding dehydrogenase DYM71_011015 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DYM71_011015 PF02203 Tar ligand binding domain homologue DYM71_011015 PF00672 HAMP domain DYM71_011020 PF03466 LysR substrate binding domain DYM71_011020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DYM71_011025 PF07063 Domain of unknown function (DUF1338) DYM71_011030 PF00135 Carboxylesterase family DYM71_011035 PF04349 Periplasmic glucan biosynthesis protein, MdoG DYM71_011040 PF04264 YceI-like domain DYM71_011045 PF01070 FMN-dependent dehydrogenase DYM71_011050 PF00583 Acetyltransferase (GNAT) family DYM71_011055 PF00455 DeoR C terminal sensor domain DYM71_011055 PF08220 DeoR-like helix-turn-helix domain DYM71_011060 PF00834 Ribulose-phosphate 3 epimerase family DYM71_011065 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DYM71_011070 PF03437 BtpA family DYM71_011075 PF03611 PTS system sugar-specific permease component DYM71_011080 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DYM71_011085 PF05343 M42 glutamyl aminopeptidase DYM71_011090 PF13302 Acetyltransferase (GNAT) domain DYM71_011095 PF18836 Beta solenoid repeat from YDCK DYM71_011100 PF03595 Voltage-dependent anion channel DYM71_011105 PF03848 Tellurite resistance protein TehB DYM71_011110 PF11769 Protein of unknown function (DUF3313) DYM71_011115 PF03594 Benzoate membrane transport protein DYM71_011120 PF01381 Helix-turn-helix DYM71_011120 PF07883 Cupin domain DYM71_011125 PF01136 Peptidase family U32 DYM71_011125 PF12392 Collagenase DYM71_011130 PF10829 Protein of unknown function (DUF2554) DYM71_011135 PF06767 Sif protein DYM71_011150 PF01427 D-ala-D-ala dipeptidase DYM71_011155 PF00392 Bacterial regulatory proteins, gntR family DYM71_011155 PF00155 Aminotransferase class I and II DYM71_011160 PF00171 Aldehyde dehydrogenase family DYM71_011170 PF10753 Toxin GhoT_OrtT DYM71_011190 PF10735 Protein of unknown function (DUF2526) DYM71_011195 PF04657 Putative inner membrane exporter, YdcZ DYM71_011205 PF00107 Zinc-binding dehydrogenase DYM71_011205 PF16884 N-terminal domain of oxidoreductase DYM71_011210 PF07729 FCD domain DYM71_011210 PF00392 Bacterial regulatory proteins, gntR family DYM71_011215 PF07715 TonB-dependent Receptor Plug Domain DYM71_011215 PF00593 TonB dependent receptor DYM71_011225 PF06004 Bacterial protein of unknown function (DUF903) DYM71_011230 PF00324 Amino acid permease DYM71_011240 PF00797 N-acetyltransferase DYM71_011245 PF02567 Phenazine biosynthesis-like protein DYM71_011250 PF02665 Nitrate reductase gamma subunit DYM71_011255 PF02613 Nitrate reductase delta subunit DYM71_011260 PF14711 Respiratory nitrate reductase beta C-terminal DYM71_011260 PF13247 4Fe-4S dicluster domain DYM71_011265 PF14710 Respiratory nitrate reductase alpha N-terminal DYM71_011265 PF01568 Molydopterin dinucleotide binding domain DYM71_011265 PF00384 Molybdopterin oxidoreductase DYM71_011270 PF07690 Major Facilitator Superfamily DYM71_011275 PF00440 Bacterial regulatory proteins, tetR family DYM71_011280 PF07690 Major Facilitator Superfamily DYM71_011290 PF00267 Gram-negative porin DYM71_011295 PF00892 EamA-like transporter family DYM71_011305 PF12800 4Fe-4S binding domain DYM71_011305 PF13247 4Fe-4S dicluster domain DYM71_011305 PF09163 Formate dehydrogenase N, transmembrane DYM71_011310 PF01292 Prokaryotic cytochrome b561 DYM71_011315 PF00107 Zinc-binding dehydrogenase DYM71_011315 PF08240 Alcohol dehydrogenase GroES-like domain DYM71_011320 PF00390 Malic enzyme, N-terminal domain DYM71_011320 PF03949 Malic enzyme, NAD binding domain DYM71_011325 PF08136 30S ribosomal protein subunit S22 family DYM71_011330 PF10684 Putative biofilm-dependent modulation protein DYM71_011335 PF02566 OsmC-like protein DYM71_011340 PF06411 HdeA/HdeB family DYM71_011350 PF11941 Domain of unknown function (DUF3459) DYM71_011350 PF00128 Alpha amylase, catalytic domain DYM71_011350 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) DYM71_011355 PF00128 Alpha amylase, catalytic domain DYM71_011360 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) DYM71_011360 PF00128 Alpha amylase, catalytic domain DYM71_011365 PF00155 Aminotransferase class I and II DYM71_011370 PF03553 Na+/H+ antiporter family DYM71_011375 PF00356 Bacterial regulatory proteins, lacI family DYM71_011385 PF03060 Nitronate monooxygenase DYM71_011390 PF03466 LysR substrate binding domain DYM71_011390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DYM71_011425 PF01042 Endoribonuclease L-PSP DYM71_011430 PF02547 Queuosine biosynthesis protein DYM71_011440 PF01494 FAD binding domain DYM71_011445 PF07690 Major Facilitator Superfamily DYM71_011455 PF07690 Major Facilitator Superfamily DYM71_011460 PF08240 Alcohol dehydrogenase GroES-like domain DYM71_011460 PF00107 Zinc-binding dehydrogenase DYM71_011465 PF07729 FCD domain DYM71_011465 PF00392 Bacterial regulatory proteins, gntR family DYM71_011475 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal DYM71_011475 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit DYM71_011480 PF00374 Nickel-dependent hydrogenase DYM71_011485 PF01292 Prokaryotic cytochrome b561 DYM71_011490 PF01750 Hydrogenase maturation protease DYM71_011495 PF01455 HupF/HypC family DYM71_011505 PF04809 HupH hydrogenase expression protein, C-terminal conserved region DYM71_011515 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA DYM71_011520 PF00267 Gram-negative porin DYM71_011530 PF01062 Bestrophin, RFP-TM, chloride channel DYM71_011535 PF13811 Domain of unknown function (DUF4186) DYM71_011540 PF04960 Glutaminase DYM71_011545 PF00171 Aldehyde dehydrogenase family DYM71_011550 PF03466 LysR substrate binding domain DYM71_011550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DYM71_011555 PF07690 Major Facilitator Superfamily DYM71_011560 PF01914 MarC family integral membrane protein DYM71_011565 PF01047 MarR family DYM71_011570 PF12833 Helix-turn-helix domain DYM71_011575 PF13999 MarB protein DYM71_011580 PF00892 EamA-like transporter family DYM71_011585 PF07690 Major Facilitator Superfamily DYM71_011595 PF04076 Bacterial OB fold (BOF) protein DYM71_011600 PF02464 Competence-damaged protein DYM71_011605 PF10685 Stress-induced bacterial acidophilic repeat motif DYM71_011610 PF01432 Peptidase family M3 DYM71_011615 PF00106 short chain dehydrogenase DYM71_011620 PF00392 Bacterial regulatory proteins, gntR family DYM71_011620 PF07729 FCD domain DYM71_011625 PF14001 YdfZ protein DYM71_011630 PF08125 Mannitol dehydrogenase C-terminal domain DYM71_011630 PF01232 Mannitol dehydrogenase Rossmann domain DYM71_011635 PF07690 Major Facilitator Superfamily DYM71_011635 PF00083 Sugar (and other) transporter DYM71_011640 PF08240 Alcohol dehydrogenase GroES-like domain DYM71_011640 PF00107 Zinc-binding dehydrogenase DYM71_011645 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain DYM71_011645 PF13378 Enolase C-terminal domain-like DYM71_011650 PF02694 Uncharacterised BCR, YnfA/UPF0060 family DYM71_011655 PF06932 Protein of unknown function (DUF1283) DYM71_011660 PF13302 Acetyltransferase (GNAT) domain DYM71_011665 PF06788 Uncharacterised protein family (UPF0257) DYM71_011670 PF06649 Protein of unknown function (DUF1161) DYM71_011675 PF01568 Molydopterin dinucleotide binding domain DYM71_011675 PF04879 Molybdopterin oxidoreductase Fe4S4 domain DYM71_011675 PF00384 Molybdopterin oxidoreductase DYM71_011680 PF04879 Molybdopterin oxidoreductase Fe4S4 domain DYM71_011680 PF01568 Molydopterin dinucleotide binding domain DYM71_011680 PF00384 Molybdopterin oxidoreductase DYM71_011685 PF13247 4Fe-4S dicluster domain DYM71_011685 PF12800 4Fe-4S binding domain DYM71_011690 PF04976 DMSO reductase anchor subunit (DmsC) DYM71_011695 PF02613 Nitrate reductase delta subunit DYM71_011700 PF00528 Binding-protein-dependent transport system inner membrane component DYM71_011705 PF04069 Substrate binding domain of ABC-type glycine betaine transport system DYM71_011710 PF00528 Binding-protein-dependent transport system inner membrane component DYM71_011715 PF00571 CBS domain DYM71_011715 PF00005 ABC transporter DYM71_011720 PF00654 Voltage gated chloride channel DYM71_011730 PF00480 ROK family DYM71_011735 PF03466 LysR substrate binding domain DYM71_011735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DYM71_011740 PF07690 Major Facilitator Superfamily DYM71_011750 PF00089 Trypsin DYM71_011755 PF00893 Small Multidrug Resistance protein DYM71_011760 PF00893 Small Multidrug Resistance protein DYM71_011765 PF01594 AI-2E family transporter DYM71_011770 PF02233 NAD(P) transhydrogenase beta subunit DYM71_011775 PF01262 Alanine dehydrogenase/PNT, C-terminal domain DYM71_011775 PF05222 Alanine dehydrogenase/PNT, N-terminal domain DYM71_011775 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch DYM71_011780 PF07338 Protein of unknown function (DUF1471) DYM71_011785 PF13520 Amino acid permease DYM71_011790 PF06942 GlpM protein DYM71_011795 PF00072 Response regulator receiver domain DYM71_011795 PF00486 Transcriptional regulatory protein, C terminal DYM71_011800 PF00267 Gram-negative porin DYM71_011805 PF13382 Adenine deaminase C-terminal domain DYM71_011805 PF01979 Amidohydrolase family DYM71_011810 PF00672 HAMP domain DYM71_011810 PF00512 His Kinase A (phospho-acceptor) domain DYM71_011810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYM71_011815 PF05472 DNA replication terminus site-binding protein (Ter protein) DYM71_011820 PF00206 Lyase DYM71_011820 PF10415 Fumarase C C-terminus DYM71_011825 PF05681 Fumarate hydratase (Fumerase) DYM71_011825 PF05683 Fumarase C-terminus DYM71_011830 PF01238 Phosphomannose isomerase type I DYM71_011835 PF06097 Bacterial protein of unknown function (DUF945) DYM71_011840 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family DYM71_011840 PF00356 Bacterial regulatory proteins, lacI family DYM71_011845 PF02378 Phosphotransferase system, EIIC DYM71_011845 PF00367 phosphotransferase system, EIIB DYM71_011850 PF00155 Aminotransferase class I and II DYM71_011855 PF00962 Adenosine/AMP deaminase DYM71_011860 PF02894 Oxidoreductase family, C-terminal alpha/beta domain DYM71_011860 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DYM71_011870 PF05321 Haemolysin expression modulating protein DYM71_011875 PF10754 Protein of unknown function (DUF2569) DYM71_011880 PF02508 Rnf-Nqr subunit, membrane protein DYM71_011885 PF04060 Putative Fe-S cluster DYM71_011890 PF10531 SLBB domain DYM71_011890 PF13375 RnfC Barrel sandwich hybrid domain DYM71_011890 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit DYM71_011890 PF12838 4Fe-4S dicluster domain DYM71_011895 PF03116 NQR2, RnfD, RnfE family DYM71_011900 PF04205 FMN-binding domain DYM71_011905 PF02508 Rnf-Nqr subunit, membrane protein DYM71_011910 PF00730 HhH-GPD superfamily base excision DNA repair protein DYM71_011910 PF00633 Helix-hairpin-helix motif DYM71_011910 PF10576 Iron-sulfur binding domain of endonuclease III DYM71_011915 PF00854 POT family DYM71_011920 PF02798 Glutathione S-transferase, N-terminal domain DYM71_011920 PF00043 Glutathione S-transferase, C-terminal domain DYM71_011925 PF08543 Phosphomethylpyrimidine kinase DYM71_011930 PF00579 tRNA synthetases class I (W and Y) DYM71_011930 PF01479 S4 domain DYM71_011935 PF01243 Pyridoxamine 5'-phosphate oxidase DYM71_011935 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region DYM71_011940 PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme DYM71_011945 PF03702 Anhydro-N-acetylmuramic acid kinase DYM71_011950 PF05433 Glycine zipper 2TM domain DYM71_011955 PF01047 MarR family DYM71_011960 PF07869 Protein of unknown function (DUF1656) DYM71_011965 PF00529 HlyD membrane-fusion protein of T1SS DYM71_011965 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DYM71_011970 PF04632 Fusaric acid resistance protein family DYM71_011975 PF00080 Copper/zinc superoxide dismutase (SODC) DYM71_011980 PF00248 Aldo/keto reductase family DYM71_011985 PF06945 Protein of unknown function (DUF1289) DYM71_011990 PF16925 Tetracyclin repressor-like, C-terminal domain DYM71_011990 PF00440 Bacterial regulatory proteins, tetR family DYM71_011995 PF00724 NADH:flavin oxidoreductase / NADH oxidase family DYM71_012000 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DYM71_012005 PF00929 Exonuclease DYM71_012010 PF00462 Glutaredoxin DYM71_012015 PF00877 NlpC/P60 family DYM71_012020 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain DYM71_012020 PF02777 Iron/manganese superoxide dismutases, C-terminal domain DYM71_012030 PF00356 Bacterial regulatory proteins, lacI family DYM71_012035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DYM71_012035 PF03466 LysR substrate binding domain DYM71_012040 PF07690 Major Facilitator Superfamily DYM71_012050 PF00677 Lumazine binding domain DYM71_012055 PF01554 MatE DYM71_012070 PF01312 FlhB HrpN YscU SpaS Family DYM71_012075 PF01311 Bacterial export proteins, family 1 DYM71_012080 PF01313 Bacterial export proteins, family 3 DYM71_012085 PF00813 FliP family DYM71_012090 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term DYM71_012105 PF18269 T3SS EscN ATPase C-terminal domain DYM71_012105 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DYM71_012110 PF00771 FHIPEP family DYM71_012120 PF07201 HrpJ-like domain DYM71_012135 PF01514 Secretory protein of YscJ/FliF family DYM71_012175 PF05802 Enterobacterial EspB protein DYM71_012180 PF04888 Secretion system effector C (SseC) like family DYM71_012190 PF03433 EspA-like secreted protein DYM71_012210 PF00263 Bacterial type II and III secretion system protein DYM71_012210 PF03958 Bacterial type II/III secretion system short domain DYM71_012220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYM71_012220 PF00672 HAMP domain DYM71_012220 PF00512 His Kinase A (phospho-acceptor) domain DYM71_012220 PF01627 Hpt domain DYM71_012220 PF00072 Response regulator receiver domain DYM71_012220 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) DYM71_012225 PF00072 Response regulator receiver domain DYM71_012225 PF00196 Bacterial regulatory proteins, luxR family DYM71_012230 PF13411 MerR HTH family regulatory protein DYM71_012235 PF08349 Protein of unknown function (DUF1722) DYM71_012240 PF10965 Protein of unknown function (DUF2767) DYM71_012245 PF00072 Response regulator receiver domain DYM71_012245 PF00196 Bacterial regulatory proteins, luxR family DYM71_012250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYM71_012250 PF00512 His Kinase A (phospho-acceptor) domain DYM71_012255 PF13247 4Fe-4S dicluster domain DYM71_012260 PF03916 Polysulphide reductase, NrfD DYM71_012265 PF00384 Molybdopterin oxidoreductase DYM71_012265 PF01568 Molydopterin dinucleotide binding domain DYM71_012265 PF04879 Molybdopterin oxidoreductase Fe4S4 domain DYM71_012270 PF00294 pfkB family carbohydrate kinase DYM71_012280 PF00561 alpha/beta hydrolase fold DYM71_012285 PF00324 Amino acid permease DYM71_012290 PF00224 Pyruvate kinase, barrel domain DYM71_012290 PF02887 Pyruvate kinase, alpha/beta domain DYM71_012295 PF04728 Lipoprotein leucine-zipper DYM71_012300 PF04728 Lipoprotein leucine-zipper DYM71_012305 PF01476 LysM domain DYM71_012305 PF03734 L,D-transpeptidase catalytic domain DYM71_012305 PF17969 L,D-transpeptidase C-terminal domain DYM71_012310 PF02657 Fe-S metabolism associated domain DYM71_012315 PF00266 Aminotransferase class-V DYM71_012320 PF01458 Uncharacterized protein family (UPF0051) DYM71_012325 PF00005 ABC transporter DYM71_012330 PF01458 Uncharacterized protein family (UPF0051) DYM71_012335 PF01521 Iron-sulphur cluster biosynthesis DYM71_012345 PF15930 Domain of unknown function DYM71_012350 PF03061 Thioesterase superfamily DYM71_012355 PF02913 FAD linked oxidases, C-terminal domain DYM71_012355 PF13183 4Fe-4S dicluster domain DYM71_012355 PF01565 FAD binding domain DYM71_012360 PF01594 AI-2E family transporter DYM71_012370 PF08965 Domain of unknown function (DUF1870) DYM71_012375 PF07690 Major Facilitator Superfamily DYM71_012380 PF07690 Major Facilitator Superfamily DYM71_012385 PF08501 Shikimate dehydrogenase substrate binding domain DYM71_012385 PF18317 Shikimate 5'-dehydrogenase C-terminal domain DYM71_012390 PF01487 Type I 3-dehydroquinase DYM71_012395 PF01144 Coenzyme A transferase DYM71_012400 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DYM71_012400 PF02770 Acyl-CoA dehydrogenase, middle domain DYM71_012400 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DYM71_012405 PF02311 AraC-like ligand binding domain DYM71_012405 PF12833 Helix-turn-helix domain DYM71_012410 PF01012 Electron transfer flavoprotein domain DYM71_012415 PF01012 Electron transfer flavoprotein domain DYM71_012415 PF00766 Electron transfer flavoprotein FAD-binding domain DYM71_012420 PF01494 FAD binding domain DYM71_012430 PF00501 AMP-binding enzyme DYM71_012430 PF13193 AMP-binding enzyme C-terminal domain DYM71_012435 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain DYM71_012435 PF02896 PEP-utilising enzyme, TIM barrel domain DYM71_012435 PF00391 PEP-utilising enzyme, mobile domain DYM71_012440 PF03618 Kinase/pyrophosphorylase DYM71_012445 PF00793 DAHP synthetase I family DYM71_012450 PF10636 Hemin uptake protein hemP DYM71_012455 PF02696 Uncharacterized ACR, YdiU/UPF0061 family DYM71_012460 PF00563 EAL domain DYM71_012465 PF00877 NlpC/P60 family DYM71_012470 PF00005 ABC transporter DYM71_012475 PF00255 Glutathione peroxidase DYM71_012480 PF01032 FecCD transport family DYM71_012485 PF00216 Bacterial DNA-binding protein DYM71_012490 PF01588 Putative tRNA binding domain DYM71_012490 PF03147 Ferredoxin-fold anticodon binding domain DYM71_012490 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain DYM71_012490 PF03484 tRNA synthetase B5 domain DYM71_012490 PF03483 B3/4 domain DYM71_012495 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain DYM71_012495 PF01409 tRNA synthetases class II core domain (F) DYM71_012505 PF00453 Ribosomal protein L20 DYM71_012510 PF01632 Ribosomal protein L35 DYM71_012515 PF05198 Translation initiation factor IF-3, N-terminal domain DYM71_012515 PF00707 Translation initiation factor IF-3, C-terminal domain DYM71_012520 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DYM71_012520 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DYM71_012520 PF03129 Anticodon binding domain DYM71_012520 PF02824 TGS domain DYM71_012525 PF01223 DNA/RNA non-specific endonuclease DYM71_012540 PF04338 Protein of unknown function, DUF481 DYM71_012545 PF00294 pfkB family carbohydrate kinase DYM71_012550 PF11080 Endoribonuclease GhoS DYM71_012555 PF03881 Fructosamine kinase DYM71_012560 PF14002 YniB-like protein DYM71_012565 PF13419 Haloacid dehalogenase-like hydrolase DYM71_012570 PF04307 LexA-binding, inner membrane-associated putative hydrolase DYM71_012580 PF10729 Cell division activator CedA DYM71_012585 PF18011 C-terminal domain found in long catalases DYM71_012585 PF06628 Catalase-related immune-responsive DYM71_012585 PF00199 Catalase DYM71_012590 PF04794 YdjC-like protein DYM71_012595 PF02056 Family 4 glycosyl hydrolase DYM71_012595 PF11975 Family 4 glycosyl hydrolase C-terminal domain DYM71_012600 PF12833 Helix-turn-helix domain DYM71_012600 PF07883 Cupin domain DYM71_012605 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit DYM71_012610 PF02378 Phosphotransferase system, EIIC DYM71_012615 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DYM71_012620 PF04355 SmpA / OmlA family DYM71_012625 PF02540 NAD synthase DYM71_012635 PF07813 LTXXQ motif family protein DYM71_012640 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family DYM71_012645 PF04996 Succinylarginine dihydrolase DYM71_012650 PF00171 Aldehyde dehydrogenase family DYM71_012655 PF04958 Arginine N-succinyltransferase beta subunit DYM71_012660 PF00202 Aminotransferase class-III DYM71_012665 PF03372 Endonuclease/Exonuclease/phosphatase family DYM71_012670 PF00293 NUDIX domain DYM71_012675 PF07383 Protein of unknown function (DUF1496) DYM71_012680 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain DYM71_012680 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase DYM71_012685 PF01751 Toprim domain DYM71_012685 PF01131 DNA topoisomerase DYM71_012690 PF00586 AIR synthase related protein, N-terminal domain DYM71_012690 PF02769 AIR synthase related protein, C-terminal domain DYM71_012695 PF00881 Nitroreductase family DYM71_012700 PF01343 Peptidase family S49 DYM71_012705 PF00710 Asparaginase, N-terminal DYM71_012705 PF17763 Glutaminase/Asparaginase C-terminal domain DYM71_012710 PF00857 Isochorismatase family DYM71_012715 PF07023 Protein of unknown function (DUF1315) DYM71_012720 PF01641 SelR domain DYM71_012725 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain DYM71_012725 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain DYM71_012730 PF01263 Aldose 1-epimerase DYM71_012735 PF00248 Aldo/keto reductase family DYM71_012740 PF04055 Radical SAM superfamily DYM71_012740 PF13186 Iron-sulfur cluster-binding domain DYM71_012745 PF06629 MltA-interacting protein MipA DYM71_012750 PF06798 PrkA serine protein kinase C-terminal domain DYM71_012750 PF08298 PrkA AAA domain DYM71_012755 PF04285 Protein of unknown function (DUF444) DYM71_012765 PF17155 Gammaproteobacterial periplasmic sensor domain DYM71_012765 PF00990 Diguanylate cyclase, GGDEF domain DYM71_012770 PF04073 Aminoacyl-tRNA editing domain DYM71_012780 PF04284 Protein of unknown function (DUF441) DYM71_012785 PF12833 Helix-turn-helix domain DYM71_012785 PF02311 AraC-like ligand binding domain DYM71_012790 PF07690 Major Facilitator Superfamily DYM71_012795 PF04343 Protein of unknown function, DUF488 DYM71_012805 PF03891 Domain of unknown function (DUF333) DYM71_012815 PF04226 Transglycosylase associated protein DYM71_012825 PF08956 Domain of unknown function (DUF1869) DYM71_012830 PF09313 Domain of unknown function (DUF1971) DYM71_012835 PF01810 LysE type translocator DYM71_012840 PF01817 Chorismate mutase type II DYM71_012850 PF00376 MerR family regulatory protein DYM71_012850 PF09278 MerR, DNA binding DYM71_012860 PF13427 Domain of unknown function (DUF4111) DYM71_012860 PF01909 Nucleotidyltransferase domain DYM71_012865 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment DYM71_012880 PF00924 Mechanosensitive ion channel DYM71_012885 PF00005 ABC transporter DYM71_012890 PF00005 ABC transporter DYM71_012895 PF12911 N-terminal TM domain of oligopeptide transport permease C DYM71_012895 PF00528 Binding-protein-dependent transport system inner membrane component DYM71_012900 PF00528 Binding-protein-dependent transport system inner membrane component DYM71_012905 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DYM71_012915 PF01292 Prokaryotic cytochrome b561 DYM71_012925 PF00011 Hsp20/alpha crystallin family DYM71_012945 PF06316 Enterobacterial Ail/Lom protein DYM71_012955 PF00313 'Cold-shock' DNA-binding domain DYM71_012960 PF00652 Ricin-type beta-trefoil lectin domain DYM71_012965 PF06183 DinI-like family DYM71_012980 PF00180 Isocitrate/isopropylmalate dehydrogenase DYM71_012985 PF00849 RNA pseudouridylate synthase DYM71_012995 PF00293 NUDIX domain DYM71_013005 PF04356 Protein of unknown function (DUF489) DYM71_013010 PF08328 Adenylosuccinate lyase C-terminal DYM71_013010 PF00206 Lyase DYM71_013015 PF00486 Transcriptional regulatory protein, C terminal DYM71_013015 PF00072 Response regulator receiver domain DYM71_013020 PF08918 PhoQ Sensor DYM71_013020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYM71_013025 PF08007 Cupin superfamily protein DYM71_013035 PF01546 Peptidase family M20/M25/M40 DYM71_013035 PF07687 Peptidase dimerisation domain DYM71_013040 PF00005 ABC transporter DYM71_013040 PF08402 TOBE domain DYM71_013045 PF00528 Binding-protein-dependent transport system inner membrane component DYM71_013050 PF06767 Sif protein DYM71_013055 PF00528 Binding-protein-dependent transport system inner membrane component DYM71_013060 PF13416 Bacterial extracellular solute-binding protein DYM71_013065 PF02146 Sir2 family DYM71_013070 PF00480 ROK family DYM71_013075 PF02687 FtsX-like permease family DYM71_013075 PF12704 MacB-like periplasmic core domain DYM71_013080 PF00005 ABC transporter DYM71_013085 PF12704 MacB-like periplasmic core domain DYM71_013085 PF02687 FtsX-like permease family DYM71_013090 PF02559 CarD-like/TRCF domain DYM71_013090 PF00270 DEAD/DEAH box helicase DYM71_013090 PF00271 Helicase conserved C-terminal domain DYM71_013090 PF03461 TRCF domain DYM71_013090 PF17757 UvrB interaction domain DYM71_013095 PF17969 L,D-transpeptidase C-terminal domain DYM71_013095 PF01476 LysM domain DYM71_013095 PF03734 L,D-transpeptidase catalytic domain DYM71_013100 PF07338 Protein of unknown function (DUF1471) DYM71_013105 PF00440 Bacterial regulatory proteins, tetR family DYM71_013110 PF05433 Glycine zipper 2TM domain DYM71_013115 PF07992 Pyridine nucleotide-disulphide oxidoreductase DYM71_013120 PF05728 Uncharacterised protein family (UPF0227) DYM71_013125 PF00933 Glycosyl hydrolase family 3 N terminal domain DYM71_013130 PF01636 Phosphotransferase enzyme family DYM71_013135 PF13036 Peptidoglycan-synthase activator LpoB DYM71_013140 PF07233 Protein of unknown function (DUF1425) DYM71_013145 PF01230 HIT domain DYM71_013150 PF00593 TonB dependent receptor DYM71_013150 PF07715 TonB-dependent Receptor Plug Domain DYM71_013155 PF02378 Phosphotransferase system, EIIC DYM71_013155 PF00367 phosphotransferase system, EIIB DYM71_013160 PF01026 TatD related DNase DYM71_013165 PF09115 DNA polymerase III, delta subunit, C terminal DYM71_013170 PF02223 Thymidylate kinase DYM71_013175 PF02618 YceG-like family DYM71_013180 PF01063 Amino-transferase class IV DYM71_013185 PF02801 Beta-ketoacyl synthase, C-terminal domain DYM71_013185 PF00109 Beta-ketoacyl synthase, N-terminal domain DYM71_013190 PF00550 Phosphopantetheine attachment site DYM71_013200 PF00698 Acyl transferase domain DYM71_013205 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal DYM71_013205 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III DYM71_013210 PF02504 Fatty acid synthesis protein DYM71_013215 PF01783 Ribosomal L32p protein family DYM71_013220 PF02620 Large ribosomal RNA subunit accumulation protein YceD DYM71_013225 PF02545 Maf-like protein DYM71_013230 PF00849 RNA pseudouridylate synthase DYM71_013230 PF01479 S4 domain DYM71_013235 PF00575 S1 RNA binding domain DYM71_013235 PF12111 Polyribonucleotide phosphorylase C terminal DYM71_013235 PF10150 Ribonuclease E/G family DYM71_013240 PF00669 Bacterial flagellin N-terminal helical region DYM71_013245 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DYM71_013245 PF00460 Flagella basal body rod protein DYM71_013250 PF10135 Rod binding protein DYM71_013250 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase DYM71_013255 PF02119 Flagellar P-ring protein DYM71_013260 PF02107 Flagellar L-ring protein DYM71_013265 PF00460 Flagella basal body rod protein DYM71_013265 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DYM71_013270 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DYM71_013270 PF00460 Flagella basal body rod protein DYM71_013275 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DYM71_013275 PF00460 Flagella basal body rod protein DYM71_013275 PF07559 Flagellar basal body protein FlaE DYM71_013280 PF13861 FlgD Tudor-like domain DYM71_013280 PF13860 FlgD Ig-like domain DYM71_013280 PF03963 Flagellar hook capping protein - N-terminal region DYM71_013285 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DYM71_013285 PF00460 Flagella basal body rod protein DYM71_013290 PF00460 Flagella basal body rod protein DYM71_013295 PF13144 Chaperone for flagella basal body P-ring formation DYM71_013300 PF04316 Anti-sigma-28 factor, FlgM DYM71_013305 PF05130 FlgN protein DYM71_013310 PF03023 Lipid II flippase MurJ DYM71_013315 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DYM71_013320 PF04337 Protein of unknown function, DUF480 DYM71_013325 PF13302 Acetyltransferase (GNAT) domain DYM71_013330 PF07690 Major Facilitator Superfamily DYM71_013335 PF13417 Glutathione S-transferase, N-terminal domain DYM71_013335 PF04399 Glutaredoxin 2, C terminal domain DYM71_013340 PF07273 Protein of unknown function (DUF1439) DYM71_013345 PF01979 Amidohydrolase family DYM71_013350 PF06183 DinI-like family DYM71_013355 PF13991 BssS protein family DYM71_013360 PF01266 FAD dependent oxidoreductase DYM71_013365 PF10968 Protein of unknown function (DUF2770) DYM71_013370 PF01292 Prokaryotic cytochrome b561 DYM71_013375 PF04264 YceI-like domain DYM71_013385 PF03279 Bacterial lipid A biosynthesis acyltransferase DYM71_013390 PF07690 Major Facilitator Superfamily DYM71_013395 PF13984 MsyB protein DYM71_013400 PF07119 Protein of unknown function (DUF1375) DYM71_013405 PF00535 Glycosyl transferase family 2 DYM71_013410 PF04349 Periplasmic glucan biosynthesis protein, MdoG DYM71_013415 PF01757 Acyltransferase family DYM71_013420 PF13091 PLD-like domain DYM71_013425 PF01661 Macro domain DYM71_013435 PF10610 Thin aggregative fimbriae synthesis protein DYM71_013440 PF07012 Curlin associated repeat DYM71_013445 PF07012 Curlin associated repeat DYM71_013450 PF00196 Bacterial regulatory proteins, luxR family DYM71_013455 PF10627 Curli assembly protein CsgE DYM71_013460 PF10614 Type VIII secretion system (T8SS), CsgF protein DYM71_013465 PF03783 Curli production assembly/transport component CsgG DYM71_013470 PF06496 Protein of unknown function (DUF1097) DYM71_013475 PF02613 Nitrate reductase delta subunit DYM71_013480 PF02811 PHP domain DYM71_013485 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DYM71_013500 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DYM71_013500 PF02894 Oxidoreductase family, C-terminal alpha/beta domain DYM71_013505 PF07690 Major Facilitator Superfamily DYM71_013510 PF06178 Oligogalacturonate-specific porin protein (KdgM) DYM71_013515 PF01344 Kelch motif DYM71_013520 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase DYM71_013525 PF00474 Sodium:solute symporter family DYM71_013530 PF01418 Helix-turn-helix domain, rpiR family DYM71_013530 PF01380 SIS domain DYM71_013535 PF02562 PhoH-like protein DYM71_013540 PF00474 Sodium:solute symporter family DYM71_013545 PF01619 Proline dehydrogenase DYM71_013545 PF18327 Proline utilization A proline dehydrogenase N-terminal domain DYM71_013545 PF14850 DNA-binding domain of Proline dehydrogenase DYM71_013545 PF00171 Aldehyde dehydrogenase family DYM71_013555 PF08362 YcdC-like protein, C-terminal region DYM71_013555 PF00440 Bacterial regulatory proteins, tetR family DYM71_013560 PF10685 Stress-induced bacterial acidophilic repeat motif DYM71_013565 PF03358 NADPH-dependent FMN reductase DYM71_013570 PF13993 YccJ-like protein DYM71_013575 PF00328 Histidine phosphatase superfamily (branch 2) DYM71_013580 PF00578 AhpC/TSA family DYM71_013585 PF13462 Thioredoxin DYM71_013585 PF06965 Na+/H+ antiporter 1 DYM71_013590 PF11412 Disulphide bond corrector protein DsbC DYM71_013590 PF13098 Thioredoxin-like domain DYM71_013590 PF02683 Cytochrome C biogenesis protein transmembrane region DYM71_013600 PF00226 DnaJ domain DYM71_013600 PF01556 DnaJ C terminal domain DYM71_013615 PF12706 Beta-lactamase superfamily domain DYM71_013625 PF07690 Major Facilitator Superfamily DYM71_013630 PF03328 HpcH/HpaI aldolase/citrate lyase family DYM71_013635 PF01557 Fumarylacetoacetate (FAA) hydrolase family DYM71_013640 PF02962 5-carboxymethyl-2-hydroxymuconate isomerase DYM71_013645 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase DYM71_013650 PF00171 Aldehyde dehydrogenase family DYM71_013655 PF01557 Fumarylacetoacetate (FAA) hydrolase family DYM71_013660 PF01047 MarR family DYM71_013665 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal DYM71_013665 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal DYM71_013670 PF01613 Flavin reductase like domain DYM71_013675 PF00576 HIUase/Transthyretin family DYM71_013680 PF00072 Response regulator receiver domain DYM71_013680 PF00486 Transcriptional regulatory protein, C terminal DYM71_013685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYM71_013685 PF00512 His Kinase A (phospho-acceptor) domain DYM71_013690 PF03577 Peptidase family C69 DYM71_013700 PF13132 Domain of unknown function (DUF3950) DYM71_013705 PF05925 Enterobacterial virulence protein IpgD DYM71_013710 PF07824 Type III secretion chaperone domain DYM71_013715 PF00805 Pentapeptide repeats (8 copies) DYM71_013730 PF01027 Inhibitor of apoptosis-promoting Bax1 DYM71_013735 PF04358 DsrC like protein DYM71_013740 PF00708 Acylphosphatase DYM71_013745 PF12833 Helix-turn-helix domain DYM71_013750 PF01161 Phosphatidylethanolamine-binding protein DYM71_013755 PF17785 PUA-like domain DYM71_013755 PF10672 S-adenosylmethionine-dependent methyltransferase DYM71_013760 PF08755 Hemimethylated DNA-binding protein YccV like DYM71_013765 PF13380 CoA binding domain DYM71_013770 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) DYM71_013775 PF02142 MGS-like domain DYM71_013780 PF00580 UvrD/REP helicase N-terminal domain DYM71_013780 PF13361 UvrD-like helicase C-terminal domain DYM71_013780 PF12462 DNA helicase IV / RNA helicase N terminal DYM71_013785 PF03733 Inner membrane component domain DYM71_013790 PF12805 FUSC-like inner membrane protein yccS DYM71_013795 PF04994 TfoX C-terminal domain DYM71_013795 PF04993 TfoX N-terminal domain DYM71_013800 PF03846 Cell division inhibitor SulA DYM71_013805 PF01389 OmpA-like transmembrane domain DYM71_013805 PF00691 OmpA family DYM71_013810 PF06303 MatP N-terminal domain DYM71_013810 PF17414 MatP C-terminal ribbon-helix-helix domain DYM71_013815 PF05362 Lon protease (S16) C-terminal proteolytic domain DYM71_013815 PF13654 AAA domain DYM71_013820 PF07977 FabA-like domain DYM71_013825 PF04957 Ribosome modulation factor DYM71_013830 PF03886 ABC-type transport auxiliary lipoprotein component DYM71_013835 PF02470 MlaD protein DYM71_013840 PF04403 Paraquat-inducible protein A DYM71_013845 PF16326 ABC transporter C-terminal domain DYM71_013845 PF00005 ABC transporter DYM71_013845 PF12848 ABC transporter DYM71_013850 PF01170 Putative RNA methylase family UPF0020 DYM71_013850 PF02926 THUMP domain DYM71_013850 PF10672 S-adenosylmethionine-dependent methyltransferase DYM71_013855 PF03473 MOSC domain DYM71_013855 PF03476 MOSC N-terminal beta barrel domain DYM71_013855 PF00111 2Fe-2S iron-sulfur cluster binding domain DYM71_013860 PF07126 Cell-division protein ZapC DYM71_013865 PF01180 Dihydroorotate dehydrogenase DYM71_013870 PF11940 Domain of unknown function (DUF3458) Ig-like fold DYM71_013870 PF17432 Domain of unknown function (DUF3458_C) ARM repeats DYM71_013870 PF01433 Peptidase family M1 domain DYM71_013875 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain DYM71_013875 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family DYM71_013880 PF01235 Sodium:alanine symporter family DYM71_013885 PF00291 Pyridoxal-phosphate dependent enzyme DYM71_013890 PF01037 Lrp/AsnC ligand binding domain DYM71_013890 PF13404 AsnC-type helix-turn-helix domain DYM71_013895 PF01336 OB-fold nucleic acid binding domain DYM71_013895 PF00152 tRNA synthetases class II (D, K and N) DYM71_013900 PF00267 Gram-negative porin DYM71_013905 PF00155 Aminotransferase class I and II DYM71_013915 PF00753 Metallo-beta-lactamase superfamily DYM71_013920 PF05951 Bacterial protein of unknown function (DUF882) DYM71_013925 PF03734 L,D-transpeptidase catalytic domain DYM71_013925 PF01471 Putative peptidoglycan binding domain DYM71_013930 PF16330 MukB hinge domain DYM71_013930 PF04310 MukB N-terminal DYM71_013935 PF04288 MukE-like family DYM71_013940 PF03882 MukF winged-helix domain DYM71_013940 PF17193 MukF C-terminal domain DYM71_013940 PF17192 MukF middle domain DYM71_013945 PF13847 Methyltransferase domain DYM71_013950 PF02698 DUF218 domain DYM71_013955 PF01636 Phosphotransferase enzyme family DYM71_013960 PF02348 Cytidylyltransferase DYM71_013965 PF03966 Trm112p-like protein DYM71_013970 PF06224 Winged helix DNA-binding domain DYM71_013975 PF02606 Tetraacyldisaccharide-1-P 4'-kinase DYM71_013980 PF00005 ABC transporter DYM71_013980 PF00664 ABC transporter transmembrane region DYM71_013985 PF00753 Metallo-beta-lactamase superfamily DYM71_013985 PF03772 Competence protein DYM71_013990 PF00216 Bacterial DNA-binding protein DYM71_013995 PF00575 S1 RNA binding domain DYM71_014000 PF02224 Cytidylate kinase DYM71_014005 PF01435 Peptidase family M48 DYM71_014010 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) DYM71_014015 PF00266 Aminotransferase class-V DYM71_014020 PF04239 Protein of unknown function (DUF421) DYM71_014025 PF18381 YcaO cyclodehydratase C-terminal domain DYM71_014025 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding DYM71_014030 PF01226 Formate/nitrite transporter DYM71_014035 PF01228 Glycine radical DYM71_014035 PF02901 Pyruvate formate lyase-like DYM71_014040 PF11047 Salmonella outer protein D DYM71_014045 PF04055 Radical SAM superfamily DYM71_014050 PF13520 Amino acid permease DYM71_014055 PF07690 Major Facilitator Superfamily DYM71_014060 PF04976 DMSO reductase anchor subunit (DmsC) DYM71_014065 PF13247 4Fe-4S dicluster domain DYM71_014065 PF12800 4Fe-4S binding domain DYM71_014070 PF00384 Molybdopterin oxidoreductase DYM71_014070 PF04879 Molybdopterin oxidoreductase Fe4S4 domain DYM71_014070 PF01568 Molydopterin dinucleotide binding domain DYM71_014075 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DYM71_014075 PF02403 Seryl-tRNA synthetase N-terminal domain DYM71_014080 PF16193 AAA C-terminal domain DYM71_014080 PF12002 MgsA AAA+ ATPase C terminal DYM71_014080 PF00004 ATPase family associated with various cellular activities (AAA) DYM71_014085 PF03548 Outer membrane lipoprotein carrier protein LolA DYM71_014090 PF13491 4TM region of DNA translocase FtsK/SpoIIIE DYM71_014090 PF17854 FtsK alpha domain DYM71_014090 PF09397 Ftsk gamma domain DYM71_014090 PF01580 FtsK/SpoIIIE family DYM71_014095 PF01037 Lrp/AsnC ligand binding domain DYM71_014100 PF07992 Pyridine nucleotide-disulphide oxidoreductase DYM71_014105 PF00664 ABC transporter transmembrane region DYM71_014105 PF00005 ABC transporter DYM71_014110 PF00005 ABC transporter DYM71_014110 PF00664 ABC transporter transmembrane region DYM71_014115 PF03588 Leucyl/phenylalanyl-tRNA protein transferase DYM71_014125 PF01176 Translation initiation factor 1A / IF-1 DYM71_014130 PF03466 LysR substrate binding domain DYM71_014130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DYM71_014135 PF05726 Pirin C-terminal cupin domain DYM71_014135 PF02678 Pirin DYM71_014140 PF00857 Isochorismatase family DYM71_014160 PF10431 C-terminal, D2-small domain, of ClpB protein DYM71_014160 PF00004 ATPase family associated with various cellular activities (AAA) DYM71_014160 PF07724 AAA domain (Cdc48 subfamily) DYM71_014160 PF02861 Clp amino terminal domain, pathogenicity island component DYM71_014160 PF17871 AAA lid domain DYM71_014165 PF02617 ATP-dependent Clp protease adaptor protein ClpS DYM71_014170 PF00313 'Cold-shock' DNA-binding domain DYM71_014175 PF12704 MacB-like periplasmic core domain DYM71_014175 PF02687 FtsX-like permease family DYM71_014175 PF00005 ABC transporter DYM71_014180 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DYM71_014185 PF04393 Protein of unknown function (DUF535) DYM71_014190 PF11398 Protein of unknown function (DUF2813) DYM71_014195 PF03956 Lysine exporter LysO DYM71_014200 PF03063 Prismane/CO dehydrogenase family DYM71_014205 PF00970 Oxidoreductase FAD-binding domain DYM71_014205 PF00111 2Fe-2S iron-sulfur cluster binding domain DYM71_014205 PF00175 Oxidoreductase NAD-binding domain DYM71_014210 PF00205 Thiamine pyrophosphate enzyme, central domain DYM71_014210 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DYM71_014210 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DYM71_014215 PF01212 Beta-eliminating lyase DYM71_014220 PF11066 Protein of unknown function (DUF2867) DYM71_014220 PF13460 NAD(P)H-binding DYM71_014225 PF01370 NAD dependent epimerase/dehydratase family DYM71_014230 PF01510 N-acetylmuramoyl-L-alanine amidase DYM71_014235 PF01906 Putative heavy-metal-binding DYM71_014240 PF12883 Protein of unknown function (DUF3828) DYM71_014245 PF00005 ABC transporter DYM71_014250 PF00497 Bacterial extracellular solute-binding proteins, family 3 DYM71_014255 PF00528 Binding-protein-dependent transport system inner membrane component DYM71_014260 PF00528 Binding-protein-dependent transport system inner membrane component DYM71_014265 PF00497 Bacterial extracellular solute-binding proteins, family 3 DYM71_014280 PF03611 PTS system sugar-specific permease component DYM71_014285 PF05958 tRNA (Uracil-5-)-methyltransferase DYM71_014290 PF10767 Protein of unknown function (DUF2593) DYM71_014295 PF00528 Binding-protein-dependent transport system inner membrane component DYM71_014300 PF00528 Binding-protein-dependent transport system inner membrane component DYM71_014305 PF00005 ABC transporter DYM71_014305 PF08402 TOBE domain DYM71_014310 PF13416 Bacterial extracellular solute-binding protein DYM71_014315 PF10722 Putative bacterial sensory transduction regulator DYM71_014320 PF08443 RimK-like ATP-grasp domain DYM71_014320 PF18030 RimK PreATP-grasp domain DYM71_014330 PF07214 Protein of unknown function (DUF1418) DYM71_014335 PF00462 Glutaredoxin DYM71_014340 PF11045 Putative inner membrane protein of Enterobacteriaceae DYM71_014345 PF06826 Predicted Permease Membrane Region DYM71_014345 PF02080 TrkA-C domain DYM71_014350 PF00440 Bacterial regulatory proteins, tetR family DYM71_014355 PF07690 Major Facilitator Superfamily DYM71_014365 PF07690 Major Facilitator Superfamily DYM71_014370 PF01569 PAP2 superfamily DYM71_014375 PF00455 DeoR C terminal sensor domain DYM71_014375 PF08220 DeoR-like helix-turn-helix domain DYM71_014380 PF07943 Penicillin-binding protein 5, C-terminal domain DYM71_014380 PF00768 D-alanyl-D-alanine carboxypeptidase DYM71_014385 PF00043 Glutathione S-transferase, C-terminal domain DYM71_014385 PF13417 Glutathione S-transferase, N-terminal domain DYM71_014390 PF07995 Glucose / Sorbosone dehydrogenase DYM71_014400 PF03466 LysR substrate binding domain DYM71_014400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DYM71_014410 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DYM71_014410 PF02770 Acyl-CoA dehydrogenase, middle domain DYM71_014410 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DYM71_014420 PF01012 Electron transfer flavoprotein domain DYM71_014420 PF00766 Electron transfer flavoprotein FAD-binding domain DYM71_014425 PF01012 Electron transfer flavoprotein domain DYM71_014430 PF03328 HpcH/HpaI aldolase/citrate lyase family DYM71_014435 PF10799 Biofilm formation protein (YliH/bssR) DYM71_014440 PF04055 Radical SAM superfamily DYM71_014440 PF00919 Uncharacterized protein family UPF0004 DYM71_014440 PF18693 TRAM domain DYM71_014445 PF00528 Binding-protein-dependent transport system inner membrane component DYM71_014445 PF12911 N-terminal TM domain of oligopeptide transport permease C DYM71_014450 PF00528 Binding-protein-dependent transport system inner membrane component DYM71_014455 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DYM71_014460 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DYM71_014460 PF00005 ABC transporter DYM71_014465 PF01112 Asparaginase DYM71_014470 PF03454 MoeA C-terminal region (domain IV) DYM71_014470 PF03453 MoeA N-terminal region (domain I and II) DYM71_014470 PF00994 Probable molybdopterin binding domain DYM71_014475 PF00899 ThiF family DYM71_014480 PF04055 Radical SAM superfamily DYM71_014485 PF02901 Pyruvate formate lyase-like DYM71_014485 PF01228 Glycine radical DYM71_014495 PF07350 Protein of unknown function (DUF1479) DYM71_014500 PF12848 ABC transporter DYM71_014500 PF00005 ABC transporter DYM71_014505 PF17969 L,D-transpeptidase C-terminal domain DYM71_014505 PF03734 L,D-transpeptidase catalytic domain DYM71_014510 PF03600 Citrate transporter DYM71_014515 PF01325 Iron dependent repressor, N-terminal DNA binding domain DYM71_014515 PF02742 Iron dependent repressor, metal binding and dimerisation domain DYM71_014525 PF00884 Sulfatase DYM71_014530 PF13505 Outer membrane protein beta-barrel domain DYM71_014535 PF00892 EamA-like transporter family DYM71_014540 PF00210 Ferritin-like domain DYM71_014545 PF00497 Bacterial extracellular solute-binding proteins, family 3 DYM71_014550 PF00528 Binding-protein-dependent transport system inner membrane component DYM71_014555 PF00005 ABC transporter DYM71_014560 PF00924 Mechanosensitive ion channel DYM71_014565 PF05971 RNA methyltransferase DYM71_014570 PF01258 Prokaryotic dksA/traR C4-type zinc finger DYM71_014575 PF07338 Protein of unknown function (DUF1471) DYM71_014585 PF02885 Glycosyl transferase family, helical bundle domain DYM71_014590 PF06733 DEAD_2 DYM71_014590 PF13307 Helicase C-terminal domain DYM71_014595 PF00271 Helicase conserved C-terminal domain DYM71_014595 PF00270 DEAD/DEAH box helicase DYM71_014600 PF00440 Bacterial regulatory proteins, tetR family DYM71_014600 PF09209 Tetracyclin repressor-like, C-terminal domain DYM71_014605 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DYM71_014610 PF00005 ABC transporter DYM71_014625 PF11076 Putative inner membrane protein YbhQ DYM71_014630 PF03372 Endonuclease/Exonuclease/phosphatase family DYM71_014635 PF13091 PLD-like domain DYM71_014640 PF03706 Lysylphosphatidylglycerol synthase TM region DYM71_014660 PF01027 Inhibitor of apoptosis-promoting Bax1 DYM71_014665 PF02391 MoaE protein DYM71_014670 PF02597 ThiS family DYM71_014675 PF01967 MoaC family DYM71_014680 PF00994 Probable molybdopterin binding domain DYM71_014685 PF04055 Radical SAM superfamily DYM71_014685 PF06463 Molybdenum Cofactor Synthesis C DYM71_014690 PF01933 Uncharacterised protein family UPF0052 DYM71_014695 PF14496 C-terminal novel E3 ligase, LRR-interacting DYM71_014695 PF12468 Type III secretion system leucine rich repeat protein DYM71_014700 PF17757 UvrB interaction domain DYM71_014700 PF00271 Helicase conserved C-terminal domain DYM71_014700 PF12344 Ultra-violet resistance protein B DYM71_014700 PF04851 Type III restriction enzyme, res subunit DYM71_014700 PF02151 UvrB/uvrC motif DYM71_014710 PF08241 Methyltransferase domain DYM71_014715 PF00155 Aminotransferase class I and II DYM71_014720 PF04055 Radical SAM superfamily DYM71_014720 PF06968 Biotin and Thiamin Synthesis associated domain DYM71_014725 PF00202 Aminotransferase class-III DYM71_014730 PF01161 Phosphatidylethanolamine-binding protein DYM71_014735 PF00221 Aromatic amino acid lyase DYM71_014740 PF17392 Urocanase C-terminal domain DYM71_014740 PF01175 Urocanase Rossmann-like domain DYM71_014740 PF17391 Urocanase N-terminal domain DYM71_014745 PF07702 UTRA domain DYM71_014745 PF00392 Bacterial regulatory proteins, gntR family DYM71_014755 PF01979 Amidohydrolase family DYM71_014860 PF03245 Bacteriophage Rz lysis protein DYM71_014865 PF00959 Phage lysozyme DYM71_014875 PF03589 Antitermination protein DYM71_014935 PF03796 DnaB-like helicase C terminal domain DYM71_014935 PF00772 DnaB-like helicase N terminal domain DYM71_014960 PF01381 Helix-turn-helix DYM71_014960 PF00717 Peptidase S24-like DYM71_015000 PF04098 Rad52/22 family double-strand break repair protein DYM71_015055 PF00589 Phage integrase family DYM71_015055 PF09003 Bacteriophage lambda integrase, Arm DNA-binding domain DYM71_015060 PF01095 Pectinesterase DYM71_015065 PF10282 Lactonase, 7-bladed beta-propeller DYM71_015075 PF03459 TOBE domain DYM71_015075 PF00005 ABC transporter DYM71_015080 PF00528 Binding-protein-dependent transport system inner membrane component DYM71_015090 PF10766 Multidrug efflux pump-associated protein AcrZ DYM71_015095 PF03459 TOBE domain DYM71_015095 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DYM71_015100 PF00005 ABC transporter DYM71_015110 PF16363 GDP-mannose 4,6 dehydratase DYM71_015115 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain DYM71_015115 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain DYM71_015120 PF08544 GHMP kinases C terminal DYM71_015120 PF10509 Galactokinase galactose-binding signature DYM71_015120 PF00288 GHMP kinases N terminal domain DYM71_015125 PF01263 Aldose 1-epimerase DYM71_015130 PF00300 Histidine phosphatase superfamily (branch 1) DYM71_015135 PF00005 ABC transporter DYM71_015140 PF01032 FecCD transport family DYM71_015145 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase DYM71_015150 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit DYM71_015155 PF00364 Biotin-requiring enzyme DYM71_015155 PF00682 HMGL-like DYM71_015155 PF02436 Conserved carboxylase domain DYM71_015160 PF04277 Oxaloacetate decarboxylase, gamma chain DYM71_015165 PF02080 TrkA-C domain DYM71_015165 PF03600 Citrate transporter DYM71_015170 PF03466 LysR substrate binding domain DYM71_015170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DYM71_015175 PF03466 LysR substrate binding domain DYM71_015175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DYM71_015180 PF05681 Fumarate hydratase (Fumerase) DYM71_015185 PF05681 Fumarate hydratase (Fumerase) DYM71_015185 PF05683 Fumarase C-terminus DYM71_015190 PF00793 DAHP synthetase I family DYM71_015195 PF13985 YbgS-like protein DYM71_015200 PF01545 Cation efflux family DYM71_015205 PF04973 Nicotinamide mononucleotide transporter DYM71_015210 PF02445 Quinolinate synthetase A protein DYM71_015240 PF16331 TolA binding protein trimerisation DYM71_015240 PF13174 Tetratricopeptide repeat DYM71_015245 PF00691 OmpA family DYM71_015250 PF07676 WD40-like Beta Propeller Repeat DYM71_015250 PF04052 TolB amino-terminal domain DYM71_015255 PF06519 TolA C-terminal DYM71_015260 PF02472 Biopolymer transport protein ExbD/TolR DYM71_015265 PF01618 MotA/TolQ/ExbB proton channel family DYM71_015270 PF03061 Thioesterase superfamily DYM71_015275 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) DYM71_015280 PF08173 Membrane bound YbgT-like protein DYM71_015285 PF02322 Cytochrome bd terminal oxidase subunit II DYM71_015290 PF01654 Cytochrome bd terminal oxidase subunit I DYM71_015295 PF02629 CoA binding domain DYM71_015295 PF00549 CoA-ligase DYM71_015300 PF00549 CoA-ligase DYM71_015300 PF08442 ATP-grasp domain DYM71_015305 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) DYM71_015305 PF00364 Biotin-requiring enzyme DYM71_015305 PF02817 e3 binding domain DYM71_015310 PF02779 Transketolase, pyrimidine binding domain DYM71_015310 PF00676 Dehydrogenase E1 component DYM71_015310 PF16870 2-oxoglutarate dehydrogenase C-terminal DYM71_015310 PF16078 2-oxoglutarate dehydrogenase N-terminus DYM71_015315 PF13085 2Fe-2S iron-sulfur cluster binding domain DYM71_015320 PF00890 FAD binding domain DYM71_015320 PF02910 Fumarate reductase flavoprotein C-term DYM71_015325 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit DYM71_015330 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit DYM71_015340 PF00285 Citrate synthase, C-terminal domain DYM71_015345 PF05145 Transition state regulatory protein AbrB DYM71_015350 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain DYM71_015350 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain DYM71_015350 PF06827 Zinc finger found in FPG and IleRS DYM71_015355 PF03746 LamB/YcsF family DYM71_015360 PF02626 Carboxyltransferase domain, subdomain A and B DYM71_015365 PF02682 Carboxyltransferase domain, subdomain C and D DYM71_015370 PF01784 NIF3 (NGG1p interacting factor 3) DYM71_015375 PF00854 POT family DYM71_015380 PF03441 FAD binding domain of DNA photolyase DYM71_015380 PF00875 DNA photolyase DYM71_015385 PF10725 Protein of unknown function (DUF2517) DYM71_015390 PF09604 F subunit of K+-transporting ATPase (Potass_KdpF) DYM71_015395 PF03814 Potassium-transporting ATPase A subunit DYM71_015405 PF02669 K+-transporting ATPase, c chain DYM71_015410 PF00512 His Kinase A (phospho-acceptor) domain DYM71_015410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYM71_015410 PF13492 GAF domain DYM71_015410 PF13493 Domain of unknown function (DUF4118) DYM71_015410 PF02702 Osmosensitive K+ channel His kinase sensor domain DYM71_015415 PF00072 Response regulator receiver domain DYM71_015415 PF00486 Transcriptional regulatory protein, C terminal DYM71_015425 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain DYM71_015425 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain DYM71_015425 PF01276 Orn/Lys/Arg decarboxylase, major domain DYM71_015430 PF13520 Amino acid permease DYM71_015440 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DYM71_015440 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DYM71_015440 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DYM71_015440 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DYM71_015445 PF17206 SeqA protein N-terminal domain DYM71_015445 PF03925 SeqA protein C-terminal domain DYM71_015450 PF12697 Alpha/beta hydrolase family DYM71_015455 PF01402 Ribbon-helix-helix protein, copG family DYM71_015460 PF00258 Flavodoxin DYM71_015465 PF01475 Ferric uptake regulator family DYM71_015470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DYM71_015470 PF03466 LysR substrate binding domain DYM71_015475 PF00890 FAD binding domain DYM71_015475 PF14537 Cytochrome c3 DYM71_015485 PF07690 Major Facilitator Superfamily DYM71_015490 PF13982 YbfN-like lipoprotein DYM71_015495 PF03573 outer membrane porin, OprD family DYM71_015500 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain DYM71_015500 PF00749 tRNA synthetases class I (E and Q), catalytic domain DYM71_015505 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 DYM71_015505 PF00367 phosphotransferase system, EIIB DYM71_015505 PF02378 Phosphotransferase system, EIIC DYM71_015510 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase DYM71_015515 PF01979 Amidohydrolase family DYM71_015520 PF01047 MarR family DYM71_015520 PF00480 ROK family DYM71_015525 PF13344 Haloacid dehalogenase-like hydrolase DYM71_015530 PF13537 Glutamine amidotransferase domain DYM71_015530 PF00733 Asparagine synthase DYM71_015575 PF01494 FAD binding domain DYM71_015580 PF00919 Uncharacterized protein family UPF0004 DYM71_015580 PF04055 Radical SAM superfamily DYM71_015580 PF01938 TRAM domain DYM71_015585 PF02562 PhoH-like protein DYM71_015590 PF02130 Uncharacterized protein family UPF0054 DYM71_015595 PF00571 CBS domain DYM71_015595 PF03471 Transporter associated domain DYM71_015600 PF00795 Carbon-nitrogen hydrolase DYM71_015605 PF00497 Bacterial extracellular solute-binding proteins, family 3 DYM71_015610 PF00528 Binding-protein-dependent transport system inner membrane component DYM71_015615 PF00528 Binding-protein-dependent transport system inner membrane component DYM71_015620 PF00005 ABC transporter DYM71_015625 PF01156 Inosine-uridine preferring nucleoside hydrolase DYM71_015635 PF00012 Hsp70 protein DYM71_015645 PF06889 Protein of unknown function (DUF1266) DYM71_015655 PF06889 Protein of unknown function (DUF1266) DYM71_015665 PF07295 Zinc-ribbon containing domain DYM71_015670 PF02954 Bacterial regulatory protein, Fis family DYM71_015670 PF00158 Sigma-54 interaction domain DYM71_015670 PF00989 PAS fold DYM71_015675 PF03812 2-keto-3-deoxygluconate permease DYM71_015680 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus DYM71_015690 PF08264 Anticodon-binding domain of tRNA DYM71_015690 PF00133 tRNA synthetases class I (I, L, M and V) DYM71_015690 PF13603 Leucyl-tRNA synthetase, Domain 2 DYM71_015695 PF04390 Lipopolysaccharide-assembly DYM71_015700 PF06144 DNA polymerase III, delta subunit DYM71_015700 PF14840 Processivity clamp loader gamma complex DNA pol III C-term DYM71_015705 PF01467 Cytidylyltransferase-like DYM71_015710 PF00155 Aminotransferase class I and II DYM71_015715 PF00300 Histidine phosphatase superfamily (branch 1) DYM71_015725 PF02590 Predicted SPOUT methyltransferase DYM71_015730 PF03717 Penicillin-binding Protein dimerisation domain DYM71_015730 PF00905 Penicillin binding protein transpeptidase domain DYM71_015735 PF01098 Cell cycle protein DYM71_015740 PF03330 Lytic transglycolase DYM71_015740 PF05036 Sporulation related domain DYM71_015745 PF07943 Penicillin-binding protein 5, C-terminal domain DYM71_015745 PF00768 D-alanyl-D-alanine carboxypeptidase DYM71_015750 PF04359 Protein of unknown function (DUF493) DYM71_015755 PF03099 Biotin/lipoate A/B protein ligase family DYM71_015760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DYM71_015760 PF03466 LysR substrate binding domain DYM71_015765 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family DYM71_015765 PF04055 Radical SAM superfamily DYM71_015770 PF02416 mttA/Hcf106 family DYM71_015775 PF00795 Carbon-nitrogen hydrolase DYM71_015780 PF02537 CrcB-like protein, Camphor Resistance (CrcB) DYM71_015785 PF00313 'Cold-shock' DNA-binding domain DYM71_015790 PF07017 Antimicrobial peptide resistance and lipid A acylation protein PagP DYM71_015795 PF03606 C4-dicarboxylate anaerobic carrier DYM71_015800 PF12431 Transcriptional regulator DYM71_015800 PF00072 Response regulator receiver domain DYM71_015805 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYM71_015805 PF00989 PAS fold DYM71_015805 PF17203 Single cache domain 3 DYM71_015805 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain DYM71_015810 PF08218 Citrate lyase ligase C-terminal domain DYM71_015815 PF06857 Malonate decarboxylase delta subunit (MdcD) DYM71_015820 PF03328 HpcH/HpaI aldolase/citrate lyase family DYM71_015825 PF04223 Citrate lyase, alpha subunit (CitF) DYM71_015830 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase DYM71_015835 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase DYM71_015840 PF00939 Sodium:sulfate symporter transmembrane region DYM71_015845 PF00445 Ribonuclease T2 family DYM71_015850 PF01272 Transcription elongation factor, GreA/GreB, C-term DYM71_015850 PF14760 Rnk N-terminus DYM71_015855 PF00107 Zinc-binding dehydrogenase DYM71_015855 PF13823 Alcohol dehydrogenase GroES-associated DYM71_015855 PF08240 Alcohol dehydrogenase GroES-like domain DYM71_015860 PF00582 Universal stress protein family DYM71_015870 PF13247 4Fe-4S dicluster domain DYM71_015875 PF01568 Molydopterin dinucleotide binding domain DYM71_015875 PF00384 Molybdopterin oxidoreductase DYM71_015875 PF04879 Molybdopterin oxidoreductase Fe4S4 domain DYM71_015885 PF07992 Pyridine nucleotide-disulphide oxidoreductase DYM71_015885 PF13192 Thioredoxin domain DYM71_015890 PF10417 C-terminal domain of 1-Cys peroxiredoxin DYM71_015890 PF00578 AhpC/TSA family DYM71_015895 PF13098 Thioredoxin-like domain DYM71_015900 PF03466 LysR substrate binding domain DYM71_015900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DYM71_015905 PF11922 Domain of unknown function (DUF3440) DYM71_015905 PF01507 Phosphoadenosine phosphosulfate reductase family DYM71_015910 PF02195 ParB-like nuclease domain DYM71_015915 PF00155 Aminotransferase class I and II DYM71_015920 PF00465 Iron-containing alcohol dehydrogenase DYM71_015925 PF04328 Selenoprotein, putative DYM71_015930 PF02554 Carbon starvation protein CstA DYM71_015930 PF13722 5TM C-terminal transporter carbon starvation CstA DYM71_015935 PF03061 Thioesterase superfamily DYM71_015945 PF00857 Isochorismatase family DYM71_015945 PF00550 Phosphopantetheine attachment site DYM71_015950 PF13193 AMP-binding enzyme C-terminal domain DYM71_015950 PF00501 AMP-binding enzyme DYM71_015955 PF00425 chorismate binding enzyme DYM71_015960 PF01497 Periplasmic binding protein DYM71_015965 PF05977 Transmembrane secretion effector DYM71_015970 PF01032 FecCD transport family DYM71_015975 PF01032 FecCD transport family DYM71_015980 PF00005 ABC transporter DYM71_015985 PF02706 Chain length determinant protein DYM71_015990 PF00975 Thioesterase domain DYM71_015990 PF00550 Phosphopantetheine attachment site DYM71_015990 PF00668 Condensation domain DYM71_015990 PF13193 AMP-binding enzyme C-terminal domain DYM71_015990 PF00501 AMP-binding enzyme DYM71_015995 PF03621 MbtH-like protein DYM71_016000 PF11806 Domain of unknown function (DUF3327) DYM71_016000 PF00756 Putative esterase DYM71_016005 PF07715 TonB-dependent Receptor Plug Domain DYM71_016005 PF00593 TonB dependent receptor DYM71_016010 PF17837 4'-phosphopantetheinyl transferase N-terminal domain DYM71_016010 PF01648 4'-phosphopantetheinyl transferase superfamily DYM71_016015 PF04107 Glutamate-cysteine ligase family 2(GCS2) DYM71_016020 PF06643 Protein of unknown function (DUF1158) DYM71_016025 PF12833 Helix-turn-helix domain DYM71_016030 PF00440 Bacterial regulatory proteins, tetR family DYM71_016030 PF16295 Tetracyclin repressor-like, C-terminal domain DYM71_016035 PF04237 YjbR DYM71_016045 PF03797 Autotransporter beta-domain DYM71_016045 PF00657 GDSL-like Lipase/Acylhydrolase DYM71_016050 PF00924 Mechanosensitive ion channel DYM71_016055 PF00324 Amino acid permease DYM71_016065 PF04224 Protein of unknown function, DUF417 DYM71_016070 PF07338 Protein of unknown function (DUF1471) DYM71_016075 PF07992 Pyridine nucleotide-disulphide oxidoreductase DYM71_016075 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DYM71_016080 PF12833 Helix-turn-helix domain DYM71_016080 PF12852 Cupin DYM71_016100 PF04138 GtrA-like protein DYM71_016105 PF00535 Glycosyl transferase family 2 DYM71_016125 PF00535 Glycosyl transferase family 2 DYM71_016130 PF04138 GtrA-like protein DYM71_016155 PF00196 Bacterial regulatory proteins, luxR family DYM71_016170 PF00072 Response regulator receiver domain DYM71_016170 PF00196 Bacterial regulatory proteins, luxR family DYM71_016175 PF00419 Fimbrial protein DYM71_016180 PF00419 Fimbrial protein DYM71_016185 PF00577 Outer membrane usher protein DYM71_016185 PF13953 PapC C-terminal domain DYM71_016185 PF13954 PapC N-terminal domain DYM71_016190 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain DYM71_016190 PF02753 Pili assembly chaperone PapD, C-terminal domain DYM71_016200 PF00419 Fimbrial protein DYM71_016205 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain DYM71_016205 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain DYM71_016215 PF04307 LexA-binding, inner membrane-associated putative hydrolase DYM71_016230 PF09190 DALR domain DYM71_016230 PF01406 tRNA synthetases class I (C) catalytic domain DYM71_016235 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD DYM71_016240 PF12850 Calcineurin-like phosphoesterase superfamily domain DYM71_016245 PF00731 AIR carboxylase DYM71_016250 PF02222 ATP-grasp domain DYM71_016250 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain DYM71_016255 PF00696 Amino acid kinase family DYM71_016260 PF11392 Protein of unknown function (DUF2877) DYM71_016265 PF06545 Protein of unknown function (DUF1116) DYM71_016270 PF02629 CoA binding domain DYM71_016270 PF00549 CoA-ligase DYM71_016275 PF02615 Malate/L-lactate dehydrogenase DYM71_016280 PF01546 Peptidase family M20/M25/M40 DYM71_016285 PF07883 Cupin domain DYM71_016285 PF05899 Protein of unknown function (DUF861) DYM71_016290 PF02595 Glycerate kinase family DYM71_016295 PF00860 Permease family DYM71_016300 PF01979 Amidohydrolase family DYM71_016305 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin DYM71_016315 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase DYM71_016315 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase DYM71_016320 PF01261 Xylose isomerase-like TIM barrel DYM71_016325 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DYM71_016325 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DYM71_016325 PF00205 Thiamine pyrophosphate enzyme, central domain DYM71_016330 PF09339 IclR helix-turn-helix domain DYM71_016330 PF01614 Bacterial transcriptional regulator DYM71_016335 PF04115 Ureidoglycolate lyase DYM71_016340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DYM71_016340 PF03466 LysR substrate binding domain DYM71_016350 PF00528 Binding-protein-dependent transport system inner membrane component DYM71_016355 PF00005 ABC transporter DYM71_016355 PF09383 NIL domain DYM71_016360 PF03180 NLPA lipoprotein DYM71_016375 PF00005 ABC transporter DYM71_016380 PF13472 GDSL-like Lipase/Acylhydrolase family DYM71_016385 PF00106 short chain dehydrogenase DYM71_016390 PF00085 Thioredoxin DYM71_016395 PF03649 Uncharacterised protein family (UPF0014) DYM71_016400 PF00005 ABC transporter DYM71_016405 PF01145 SPFH domain / Band 7 family DYM71_016405 PF16200 C-terminal region of band_7 DYM71_016410 PF01957 NfeD-like C-terminal, partner-binding DYM71_016415 PF13411 MerR HTH family regulatory protein DYM71_016420 PF00403 Heavy-metal-associated domain DYM71_016430 PF01963 TraB family DYM71_016435 PF04073 Aminoacyl-tRNA editing domain DYM71_016440 PF00149 Calcineurin-like phosphoesterase DYM71_016440 PF02872 5'-nucleotidase, C-terminal domain DYM71_016445 PF07690 Major Facilitator Superfamily DYM71_016450 PF00999 Sodium/hydrogen exchanger family DYM71_016450 PF02254 TrkA-N domain DYM71_016455 PF00294 pfkB family carbohydrate kinase DYM71_016460 PF07859 alpha/beta hydrolase fold DYM71_016465 PF00762 Ferrochelatase DYM71_016470 PF05191 Adenylate kinase, active site lid DYM71_016475 PF00183 Hsp90 protein DYM71_016475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYM71_016480 PF02132 RecR protein DYM71_016480 PF13662 Toprim domain DYM71_016485 PF02575 YbaB/EbfC DNA-binding family DYM71_016490 PF12170 DNA polymerase III tau subunit V interacting with alpha DYM71_016490 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding DYM71_016490 PF12169 DNA polymerase III subunits gamma and tau domain III DYM71_016495 PF00156 Phosphoribosyl transferase domain DYM71_016500 PF04304 Protein of unknown function (DUF454) DYM71_016505 PF07445 Primosomal replication protein priC DYM71_016510 PF10689 Protein of unknown function (DUF2496) DYM71_016525 PF00924 Mechanosensitive ion channel DYM71_016525 PF12795 Mechanosensitive ion channel porin domain DYM71_016525 PF12794 Mechanosensitive ion channel inner membrane domain 1 DYM71_016530 PF08361 MAATS-type transcriptional repressor, C-terminal region DYM71_016530 PF00440 Bacterial regulatory proteins, tetR family DYM71_016535 PF00529 HlyD membrane-fusion protein of T1SS DYM71_016535 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DYM71_016540 PF00873 AcrB/AcrD/AcrF family DYM71_016545 PF10757 Biofilm formation regulator YbaJ DYM71_016550 PF05321 Haemolysin expression modulating protein DYM71_016555 PF12464 Maltose acetyltransferase DYM71_016555 PF14602 Hexapeptide repeat of succinyl-transferase DYM71_016560 PF10777 Inner membrane protein YlaC DYM71_016565 PF00444 Ribosomal protein L36 DYM71_016570 PF01197 Ribosomal protein L31 DYM71_016575 PF12792 CSS motif domain associated with EAL DYM71_016575 PF00563 EAL domain DYM71_016585 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain DYM71_016590 PF09619 Type III secretion system lipoprotein chaperone (YscW) DYM71_016600 PF00909 Ammonium Transporter Family DYM71_016605 PF00543 Nitrogen regulatory protein P-II DYM71_016610 PF00005 ABC transporter DYM71_016610 PF00664 ABC transporter transmembrane region DYM71_016615 PF00005 ABC transporter DYM71_016615 PF00664 ABC transporter transmembrane region DYM71_016620 PF01037 Lrp/AsnC ligand binding domain DYM71_016620 PF13404 AsnC-type helix-turn-helix domain DYM71_016635 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DYM71_016635 PF12793 Sugar transport-related sRNA regulator N-term DYM71_016640 PF06508 Queuosine biosynthesis protein QueC DYM71_016655 PF13145 PPIC-type PPIASE domain DYM71_016660 PF00216 Bacterial DNA-binding protein DYM71_016665 PF05362 Lon protease (S16) C-terminal proteolytic domain DYM71_016665 PF02190 ATP-dependent protease La (LON) substrate-binding domain DYM71_016665 PF00004 ATPase family associated with various cellular activities (AAA) DYM71_016670 PF10431 C-terminal, D2-small domain, of ClpB protein DYM71_016670 PF06689 ClpX C4-type zinc finger DYM71_016670 PF07724 AAA domain (Cdc48 subfamily) DYM71_016675 PF00574 Clp protease DYM71_016680 PF05697 Bacterial trigger factor protein (TF) DYM71_016680 PF05698 Bacterial trigger factor protein (TF) C-terminus DYM71_016680 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DYM71_016685 PF01722 BolA-like protein DYM71_016690 PF08139 Prokaryotic membrane lipoprotein lipid attachment site DYM71_016690 PF03923 Uncharacterized lipoprotein DYM71_016695 PF07690 Major Facilitator Superfamily DYM71_016700 PF06481 COX Aromatic Rich Motif DYM71_016700 PF00116 Cytochrome C oxidase subunit II, periplasmic domain DYM71_016705 PF00115 Cytochrome C and Quinol oxidase polypeptide I DYM71_016710 PF00510 Cytochrome c oxidase subunit III DYM71_016715 PF03626 Prokaryotic Cytochrome C oxidase subunit IV DYM71_016720 PF01040 UbiA prenyltransferase family DYM71_016735 PF07690 Major Facilitator Superfamily DYM71_016740 PF04461 Protein of unknown function (DUF520) DYM71_016745 PF02558 Ketopantoate reductase PanE/ApbA DYM71_016745 PF08546 Ketopantoate reductase PanE/ApbA C terminal DYM71_016750 PF01965 DJ-1/PfpI family DYM71_016760 PF00266 Aminotransferase class-V DYM71_016765 PF00392 Bacterial regulatory proteins, gntR family DYM71_016765 PF07702 UTRA domain DYM71_016770 PF01547 Bacterial extracellular solute-binding protein DYM71_016775 PF08402 TOBE domain DYM71_016775 PF00005 ABC transporter DYM71_016780 PF00528 Binding-protein-dependent transport system inner membrane component DYM71_016785 PF00528 Binding-protein-dependent transport system inner membrane component DYM71_016790 PF02926 THUMP domain DYM71_016790 PF02568 Thiamine biosynthesis protein (ThiI) DYM71_016795 PF02609 Exonuclease VII small subunit DYM71_016800 PF00348 Polyprenyl synthetase DYM71_016805 PF13292 1-deoxy-D-xylulose-5-phosphate synthase DYM71_016805 PF02779 Transketolase, pyrimidine binding domain DYM71_016805 PF02780 Transketolase, C-terminal domain DYM71_016810 PF00248 Aldo/keto reductase family DYM71_016815 PF04608 Phosphatidylglycerophosphatase A DYM71_016820 PF00586 AIR synthase related protein, N-terminal domain DYM71_016820 PF02769 AIR synthase related protein, C-terminal domain DYM71_016825 PF01029 NusB family DYM71_016830 PF00885 6,7-dimethyl-8-ribityllumazine synthase DYM71_016835 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region DYM71_016835 PF01872 RibD C-terminal domain DYM71_016840 PF03477 ATP cone domain DYM71_016845 PF11622 Protein of unknown function (DUF3251) DYM71_016850 PF03502 Nucleoside-specific channel-forming protein, Tsx DYM71_016855 PF01797 Transposase IS200 like DYM71_016865 PF01844 HNH endonuclease DYM71_016880 PF07549 SecD/SecF GG Motif DYM71_016880 PF02355 Protein export membrane protein DYM71_016885 PF13721 SecD export protein N-terminal TM region DYM71_016885 PF07549 SecD/SecF GG Motif DYM71_016885 PF02355 Protein export membrane protein DYM71_016890 PF02699 Preprotein translocase subunit DYM71_016895 PF01702 Queuine tRNA-ribosyltransferase DYM71_016900 PF02547 Queuosine biosynthesis protein DYM71_016905 PF04336 Acyl carrier protein phosphodiesterase DYM71_016910 PF00578 AhpC/TSA family DYM71_016910 PF10417 C-terminal domain of 1-Cys peroxiredoxin DYM71_016915 PF00128 Alpha amylase, catalytic domain DYM71_016915 PF02903 Alpha amylase, N-terminal ig-like domain DYM71_016920 PF00324 Amino acid permease DYM71_016925 PF05525 Branched-chain amino acid transport protein DYM71_016930 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYM71_016930 PF00512 His Kinase A (phospho-acceptor) domain DYM71_016930 PF00989 PAS fold DYM71_016930 PF11808 Phosphate regulon sensor protein PhoR DYM71_016935 PF00072 Response regulator receiver domain DYM71_016935 PF00486 Transcriptional regulatory protein, C terminal DYM71_016940 PF12320 Type 5 capsule protein repressor C-terminal domain DYM71_016940 PF00149 Calcineurin-like phosphoesterase DYM71_016945 PF13476 AAA domain DYM71_016950 PF07690 Major Facilitator Superfamily DYM71_016955 PF00480 ROK family DYM71_016960 PF04381 Putative exonuclease, RdgC DYM71_016965 PF06865 Pyrimidine/purine nucleoside phosphorylase DYM71_016970 PF07302 AroM protein DYM71_016975 PF16362 YaiA protein DYM71_016980 PF01202 Shikimate kinase DYM71_016985 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 DYM71_016990 PF03807 NADP oxidoreductase coenzyme F420-dependent DYM71_016990 PF14748 Pyrroline-5-carboxylate reductase dimerisation DYM71_016995 PF00990 Diguanylate cyclase, GGDEF domain DYM71_016995 PF05230 MASE2 domain DYM71_017000 PF07769 psiF repeat DYM71_017005 PF10796 Sigma-S stabilisation anti-adaptor protein DYM71_017010 PF07690 Major Facilitator Superfamily DYM71_017020 PF01820 D-ala D-ala ligase N-terminus DYM71_017020 PF07478 D-ala D-ala ligase C-terminus DYM71_017025 PF10953 Protein of unknown function (DUF2754) DYM71_017030 PF10954 Protein of unknown function (DUF2755) DYM71_017035 PF07759 Protein of unknown function (DUF1615) DYM71_017040 PF05992 SbmA/BacA-like family DYM71_017045 PF00144 Beta-lactamase DYM71_017050 PF15977 Winged helix-turn-helix DNA binding DYM71_017055 PF03797 Autotransporter beta-domain DYM71_017060 PF00490 Delta-aminolevulinic acid dehydratase DYM71_017065 PF00501 AMP-binding enzyme DYM71_017065 PF13193 AMP-binding enzyme C-terminal domain DYM71_017065 PF16177 Acetyl-coenzyme A synthetase N-terminus DYM71_017070 PF03972 MmgE/PrpD family DYM71_017075 PF00285 Citrate synthase, C-terminal domain DYM71_017085 PF06506 Propionate catabolism activator DYM71_017085 PF02954 Bacterial regulatory protein, Fis family DYM71_017085 PF00158 Sigma-54 interaction domain DYM71_017090 PF07338 Protein of unknown function (DUF1471) DYM71_017095 PF01810 LysE type translocator DYM71_017100 PF00593 TonB dependent receptor DYM71_017100 PF07715 TonB-dependent Receptor Plug Domain DYM71_017115 PF02322 Cytochrome bd terminal oxidase subunit II DYM71_017120 PF01654 Cytochrome bd terminal oxidase subunit I DYM71_017130 PF08774 VRR-NUC domain DYM71_017130 PF04851 Type III restriction enzyme, res subunit DYM71_017135 PF01555 DNA methylase DYM71_017135 PF18273 Type III R-M EcoP15I C-terminal domain DYM71_017140 PF07690 Major Facilitator Superfamily DYM71_017150 PF09278 MerR, DNA binding DYM71_017150 PF00376 MerR family regulatory protein DYM71_017155 PF00403 Heavy-metal-associated domain DYM71_017160 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DYM71_017165 PF00873 AcrB/AcrD/AcrF family DYM71_017170 PF02321 Outer membrane efflux protein DYM71_017190 PF13505 Outer membrane protein beta-barrel domain DYM71_017205 PF00563 EAL domain DYM71_017205 PF12792 CSS motif domain associated with EAL DYM71_017220 PF16970 Type-1 fimbrial protein, A DYM71_017225 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain DYM71_017225 PF02753 Pili assembly chaperone PapD, C-terminal domain DYM71_017230 PF00577 Outer membrane usher protein DYM71_017230 PF13953 PapC C-terminal domain DYM71_017230 PF13954 PapC N-terminal domain DYM71_017240 PF02753 Pili assembly chaperone PapD, C-terminal domain DYM71_017240 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain DYM71_017255 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DYM71_017255 PF03466 LysR substrate binding domain DYM71_017260 PF00561 alpha/beta hydrolase fold DYM71_017265 PF01557 Fumarylacetoacetate (FAA) hydrolase family DYM71_017270 PF00694 Aconitase C-terminal domain DYM71_017275 PF00330 Aconitase family (aconitate hydratase) DYM71_017280 PF07690 Major Facilitator Superfamily DYM71_017285 PF08986 Domain of unknown function (DUF1889) DYM71_017300 PF13356 Arm DNA-binding domain DYM71_017300 PF00589 Phage integrase family DYM71_017310 PF00171 Aldehyde dehydrogenase family DYM71_017315 PF00696 Amino acid kinase family DYM71_017315 PF01472 PUA domain DYM71_017320 PF00267 Gram-negative porin DYM71_017325 PF07417 Sigma factor-binding transcriptional regulator Crl DYM71_017330 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) DYM71_017335 PF00156 Phosphoribosyl transferase domain DYM71_017340 PF01546 Peptidase family M20/M25/M40 DYM71_017340 PF07687 Peptidase dimerisation domain DYM71_017345 PF00472 RF-1 domain DYM71_017355 PF11798 IMS family HHH motif DYM71_017355 PF11799 impB/mucB/samB family C-terminal domain DYM71_017355 PF00817 impB/mucB/samB family DYM71_017360 PF03734 L,D-transpeptidase catalytic domain DYM71_017365 PF13230 Glutamine amidotransferases class-II DYM71_017370 PF13580 SIS domain DYM71_017375 PF09317 Domain of unknown function (DUF1974) DYM71_017375 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DYM71_017375 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DYM71_017375 PF02770 Acyl-CoA dehydrogenase, middle domain DYM71_017380 PF00795 Carbon-nitrogen hydrolase DYM71_017390 PF13505 Outer membrane protein beta-barrel domain DYM71_017450 PF03466 LysR substrate binding domain DYM71_017450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DYM71_017470 PF13954 PapC N-terminal domain DYM71_017470 PF00577 Outer membrane usher protein DYM71_017470 PF13953 PapC C-terminal domain DYM71_017475 PF02753 Pili assembly chaperone PapD, C-terminal domain DYM71_017475 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain DYM71_017520 PF05593 RHS Repeat DYM71_017520 PF03527 RHS protein DYM71_017530 PF16671 Actin cross-linking domain DYM71_017530 PF04717 Type VI secretion system, phage-baseplate injector DYM71_017575 PF00691 OmpA family DYM71_017575 PF05736 OprF membrane domain DYM71_017630 PF07724 AAA domain (Cdc48 subfamily) DYM71_017630 PF00004 ATPase family associated with various cellular activities (AAA) DYM71_017630 PF17871 AAA lid domain DYM71_017630 PF10431 C-terminal, D2-small domain, of ClpB protein DYM71_017670 PF00929 Exonuclease DYM71_017675 PF00075 RNase H DYM71_017680 PF08241 Methyltransferase domain DYM71_017685 PF16123 Hydroxyacylglutathione hydrolase C-terminus DYM71_017685 PF00753 Metallo-beta-lactamase superfamily DYM71_017690 PF01476 LysM domain DYM71_017690 PF01464 Transglycosylase SLT domain DYM71_017695 PF08241 Methyltransferase domain DYM71_017700 PF03372 Endonuclease/Exonuclease/phosphatase family DYM71_017705 PF07690 Major Facilitator Superfamily DYM71_017710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DYM71_017710 PF03466 LysR substrate binding domain DYM71_017715 PF00248 Aldo/keto reductase family DYM71_017755 PF00005 ABC transporter DYM71_017755 PF09383 NIL domain DYM71_017760 PF00528 Binding-protein-dependent transport system inner membrane component DYM71_017765 PF03180 NLPA lipoprotein DYM71_017770 PF16358 RcsF lipoprotein DYM71_017775 PF18389 TrmO C-terminal domain DYM71_017775 PF01980 tRNA-methyltransferase O DYM71_017780 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DYM71_017780 PF03129 Anticodon binding domain DYM71_017780 PF04073 Aminoacyl-tRNA editing domain DYM71_017785 PF17185 NlpE C-terminal OB domain DYM71_017785 PF04170 NlpE N-terminal domain DYM71_017790 PF00472 RF-1 domain DYM71_017795 PF07152 YaeQ protein DYM71_017800 PF06786 Uncharacterised protein family (UPF0253) DYM71_017805 PF07073 Modulator of Rho-dependent transcription termination (ROF) DYM71_017810 PF11734 TilS substrate C-terminal domain DYM71_017810 PF01171 PP-loop family DYM71_017810 PF09179 TilS substrate binding domain DYM71_017815 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DYM71_017825 PF18416 N-acetylglucosamine binding protein domain 2 DYM71_017825 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading DYM71_017830 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit DYM71_017835 PF14579 Helix-hairpin-helix motif DYM71_017835 PF02811 PHP domain DYM71_017835 PF01336 OB-fold nucleic acid binding domain DYM71_017835 PF17657 Bacterial DNA polymerase III alpha subunit finger domain DYM71_017835 PF07733 Bacterial DNA polymerase III alpha NTPase domain DYM71_017840 PF01351 Ribonuclease HII DYM71_017845 PF02684 Lipid-A-disaccharide synthetase DYM71_017850 PF00132 Bacterial transferase hexapeptide (six repeats) DYM71_017850 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 DYM71_017855 PF07977 FabA-like domain DYM71_017860 PF00132 Bacterial transferase hexapeptide (six repeats) DYM71_017860 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD DYM71_017865 PF03938 Outer membrane protein (OmpH-like) DYM71_017870 PF07244 Surface antigen variable number repeat DYM71_017870 PF01103 Surface antigen DYM71_017875 PF17820 PDZ domain DYM71_017875 PF02163 Peptidase family M50 DYM71_017885 PF01255 Putative undecaprenyl diphosphate synthase DYM71_017890 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain DYM71_017890 PF13288 DXP reductoisomerase C-terminal domain DYM71_017890 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase DYM71_017895 PF01765 Ribosome recycling factor DYM71_017900 PF00696 Amino acid kinase family DYM71_017905 PF00889 Elongation factor TS DYM71_017910 PF00318 Ribosomal protein S2 DYM71_017915 PF00557 Metallopeptidase family M24 DYM71_017920 PF01909 Nucleotidyltransferase domain DYM71_017920 PF08335 GlnD PII-uridylyltransferase DYM71_017920 PF01966 HD domain DYM71_017920 PF01842 ACT domain DYM71_017925 PF14602 Hexapeptide repeat of succinyl-transferase DYM71_017925 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal DYM71_017925 PF00132 Bacterial transferase hexapeptide (six repeats) DYM71_017930 PF07690 Major Facilitator Superfamily DYM71_017930 PF00083 Sugar (and other) transporter DYM71_017935 PF11944 Protein of unknown function (DUF3461) DYM71_017940 PF05651 Putative sugar diacid recognition DYM71_017940 PF13556 PucR C-terminal helix-turn-helix domain DYM71_017940 PF17853 GGDEF-like domain DYM71_017945 PF00595 PDZ domain DYM71_017950 PF01966 HD domain DYM71_017950 PF13286 Phosphohydrolase-associated domain DYM71_017955 PF01048 Phosphorylase superfamily DYM71_017960 PF01497 Periplasmic binding protein DYM71_017965 PF03458 UPF0126 domain DYM71_017970 PF01521 Iron-sulphur cluster biosynthesis DYM71_017975 PF00654 Voltage gated chloride channel DYM71_017980 PF00202 Aminotransferase class-III DYM71_017985 PF11245 Protein of unknown function (DUF2544) DYM71_017990 PF00419 Fimbrial protein DYM71_017995 PF00419 Fimbrial protein DYM71_018000 PF00419 Fimbrial protein DYM71_018005 PF02753 Pili assembly chaperone PapD, C-terminal domain DYM71_018005 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain DYM71_018010 PF00577 Outer membrane usher protein DYM71_018010 PF13953 PapC C-terminal domain DYM71_018010 PF13954 PapC N-terminal domain DYM71_018020 PF01032 FecCD transport family DYM71_018025 PF01497 Periplasmic binding protein DYM71_018030 PF00005 ABC transporter DYM71_018035 PF07715 TonB-dependent Receptor Plug Domain DYM71_018035 PF00593 TonB dependent receptor DYM71_018040 PF14812 Transmembrane domain of transglycosylase PBP1 at N-terminal DYM71_018040 PF00912 Transglycosylase DYM71_018040 PF00905 Penicillin binding protein transpeptidase domain DYM71_018040 PF14814 Bifunctional transglycosylase second domain DYM71_018045 PF00270 DEAD/DEAH box helicase DYM71_018045 PF00271 Helicase conserved C-terminal domain DYM71_018045 PF04408 Helicase associated domain (HA2) DYM71_018045 PF08482 ATP-dependent helicase C-terminal DYM71_018050 PF02834 LigT like Phosphoesterase DYM71_018055 PF03749 Sugar fermentation stimulation protein RE domain DYM71_018055 PF17746 SfsA N-terminal OB domain DYM71_018060 PF01258 Prokaryotic dksA/traR C4-type zinc finger DYM71_018065 PF00749 tRNA synthetases class I (E and Q), catalytic domain DYM71_018070 PF01743 Poly A polymerase head domain DYM71_018070 PF12627 Probable RNA and SrmB- binding site of polymerase A DYM71_018070 PF12626 Polymerase A arginine-rich C-terminus DYM71_018075 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) DYM71_018080 PF02548 Ketopantoate hydroxymethyltransferase DYM71_018085 PF02569 Pantoate-beta-alanine ligase DYM71_018090 PF02261 Aspartate decarboxylase DYM71_018095 PF01522 Polysaccharide deacetylase DYM71_018100 PF03610 PTS system fructose IIA component DYM71_018110 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain DYM71_018110 PF02753 Pili assembly chaperone PapD, C-terminal domain DYM71_018115 PF00577 Outer membrane usher protein DYM71_018115 PF13953 PapC C-terminal domain DYM71_018115 PF13954 PapC N-terminal domain DYM71_018120 PF00419 Fimbrial protein DYM71_018125 PF01061 ABC-2 type transporter DYM71_018130 PF00005 ABC transporter DYM71_018135 PF00484 Carbonic anhydrase DYM71_018140 PF00156 Phosphoribosyl transferase domain DYM71_018145 PF01011 PQQ enzyme repeat DYM71_018150 PF00394 Multicopper oxidase DYM71_018150 PF07732 Multicopper oxidase DYM71_018150 PF07731 Multicopper oxidase DYM71_018155 PF09691 Type II secretion system pilotin lipoprotein (PulS_OutS) DYM71_018160 PF17284 Spermidine synthase tetramerisation domain DYM71_018165 PF02675 S-adenosylmethionine decarboxylase DYM71_018170 PF00455 DeoR C terminal sensor domain DYM71_018170 PF08220 DeoR-like helix-turn-helix domain DYM71_018175 PF04166 Pyridoxal phosphate biosynthetic protein PdxA DYM71_018180 PF07005 Sugar-binding N-terminal domain DYM71_018180 PF17042 Nucleotide-binding C-terminal domain DYM71_018185 PF03812 2-keto-3-deoxygluconate permease DYM71_018190 PF06062 Uncharacterised protein family (UPF0231) DYM71_018205 PF11791 Aconitate B N-terminal domain DYM71_018205 PF06434 Aconitate hydratase 2 N-terminus DYM71_018205 PF00330 Aconitase family (aconitate hydratase) DYM71_018210 PF11737 Protein of unknown function (DUF3300) DYM71_018225 PF07992 Pyridine nucleotide-disulphide oxidoreductase DYM71_018225 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DYM71_018230 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) DYM71_018230 PF02817 e3 binding domain DYM71_018230 PF00364 Biotin-requiring enzyme DYM71_018235 PF00456 Transketolase, thiamine diphosphate binding domain DYM71_018235 PF17831 Pyruvate dehydrogenase E1 component middle domain DYM71_018240 PF00392 Bacterial regulatory proteins, gntR family DYM71_018240 PF07729 FCD domain DYM71_018245 PF00324 Amino acid permease DYM71_018255 PF05270 Alpha-L-arabinofuranosidase B (ABFB) domain DYM71_018255 PF04616 Glycosyl hydrolases family 43 DYM71_018260 PF17113 Regulatory signalling modulator protein AmpE DYM71_018265 PF01510 N-acetylmuramoyl-L-alanine amidase DYM71_018270 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain DYM71_018270 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain DYM71_018275 PF07963 Prokaryotic N-terminal methylation motif DYM71_018280 PF00437 Type II/IV secretion system protein DYM71_018280 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain DYM71_018285 PF00482 Type II secretion system (T2SS), protein F DYM71_018290 PF00478 IMP dehydrogenase / GMP reductase domain DYM71_018295 PF01121 Dephospho-CoA kinase DYM71_018300 PF07072 Cell division protein DYM71_018305 PF03884 DNA gyrase inhibitor YacG DYM71_018310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DYM71_018310 PF03466 LysR substrate binding domain DYM71_018315 PF00248 Aldo/keto reductase family DYM71_018320 PF00293 NUDIX domain DYM71_018325 PF07517 SecA DEAD-like domain DYM71_018325 PF02810 SEC-C motif DYM71_018325 PF07516 SecA Wing and Scaffold domain DYM71_018325 PF01043 SecA preprotein cross-linking domain DYM71_018330 PF06558 Secretion monitor precursor protein (SecM) DYM71_018335 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase DYM71_018340 PF00091 Tubulin/FtsZ family, GTPase domain DYM71_018340 PF12327 FtsZ family, C-terminal domain DYM71_018345 PF02491 SHS2 domain inserted in FTSA DYM71_018350 PF03799 Cell division protein FtsQ DYM71_018350 PF08478 POTRA domain, FtsQ-type DYM71_018355 PF07478 D-ala D-ala ligase C-terminus DYM71_018355 PF01820 D-ala D-ala ligase N-terminus DYM71_018360 PF01225 Mur ligase family, catalytic domain DYM71_018360 PF02875 Mur ligase family, glutamate ligase domain DYM71_018360 PF08245 Mur ligase middle domain DYM71_018365 PF03033 Glycosyltransferase family 28 N-terminal domain DYM71_018365 PF04101 Glycosyltransferase family 28 C-terminal domain DYM71_018370 PF01098 Cell cycle protein DYM71_018375 PF02875 Mur ligase family, glutamate ligase domain DYM71_018375 PF08245 Mur ligase middle domain DYM71_018380 PF00953 Glycosyl transferase family 4 DYM71_018380 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 DYM71_018385 PF02875 Mur ligase family, glutamate ligase domain DYM71_018385 PF01225 Mur ligase family, catalytic domain DYM71_018385 PF08245 Mur ligase middle domain DYM71_018390 PF08245 Mur ligase middle domain DYM71_018390 PF02875 Mur ligase family, glutamate ligase domain DYM71_018390 PF01225 Mur ligase family, catalytic domain DYM71_018395 PF00905 Penicillin binding protein transpeptidase domain DYM71_018395 PF03717 Penicillin-binding Protein dimerisation domain DYM71_018400 PF04999 Cell division protein FtsL DYM71_018405 PF01795 MraW methylase family DYM71_018410 PF02381 MraZ protein, putative antitoxin-like DYM71_018415 PF00356 Bacterial regulatory proteins, lacI family DYM71_018415 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family DYM71_018420 PF10369 Small subunit of acetolactate synthase DYM71_018425 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DYM71_018425 PF00205 Thiamine pyrophosphate enzyme, central domain DYM71_018425 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DYM71_018430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DYM71_018430 PF03466 LysR substrate binding domain DYM71_018435 PF08054 Leucine operon leader peptide DYM71_018440 PF00682 HMGL-like DYM71_018440 PF08502 LeuA allosteric (dimerisation) domain DYM71_018445 PF00180 Isocitrate/isopropylmalate dehydrogenase DYM71_018450 PF00330 Aconitase family (aconitate hydratase) DYM71_018455 PF00694 Aconitase C-terminal domain DYM71_018470 PF12793 Sugar transport-related sRNA regulator N-term DYM71_018470 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DYM71_018480 PF00528 Binding-protein-dependent transport system inner membrane component DYM71_018485 PF00005 ABC transporter DYM71_018490 PF09335 SNARE associated Golgi protein DYM71_018495 PF12833 Helix-turn-helix domain DYM71_018495 PF02311 AraC-like ligand binding domain DYM71_018500 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DYM71_018505 PF02610 L-arabinose isomerase DYM71_018505 PF11762 L-arabinose isomerase C-terminal domain DYM71_018510 PF00596 Class II Aldolase and Adducin N-terminal domain DYM71_018530 PF00136 DNA polymerase family B DYM71_018530 PF03104 DNA polymerase family B, exonuclease domain DYM71_018535 PF18339 RapA N-terminal Tudor like domain 1 DYM71_018535 PF00176 SNF2 family N-terminal domain DYM71_018535 PF12137 RNA polymerase recycling family C-terminal DYM71_018535 PF18337 RapA N-terminal Tudor like domain DYM71_018535 PF00271 Helicase conserved C-terminal domain DYM71_018540 PF00849 RNA pseudouridylate synthase DYM71_018545 PF05099 Tellurite resistance protein TerB DYM71_018545 PF00226 DnaJ domain DYM71_018550 PF04453 LPS transport system D DYM71_018550 PF03968 OstA-like protein DYM71_018555 PF00639 PPIC-type PPIASE domain DYM71_018555 PF09312 SurA N-terminal domain DYM71_018560 PF04166 Pyridoxal phosphate biosynthetic protein PdxA DYM71_018565 PF00398 Ribosomal RNA adenine dimethylase DYM71_018570 PF04379 ApaG domain DYM71_018575 PF00149 Calcineurin-like phosphoesterase DYM71_018580 PF00186 Dihydrofolate reductase DYM71_018585 PF02254 TrkA-N domain DYM71_018585 PF00999 Sodium/hydrogen exchanger family DYM71_018590 PF02525 Flavodoxin-like fold DYM71_018595 PF00884 Sulfatase DYM71_018610 PF06004 Bacterial protein of unknown function (DUF903) DYM71_018615 PF00083 Sugar (and other) transporter DYM71_018625 PF01494 FAD binding domain DYM71_018630 PF01012 Electron transfer flavoprotein domain DYM71_018630 PF00766 Electron transfer flavoprotein FAD-binding domain DYM71_018635 PF01012 Electron transfer flavoprotein domain DYM71_018640 PF02028 BCCT, betaine/carnitine/choline family transporter DYM71_018645 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DYM71_018645 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DYM71_018645 PF02770 Acyl-CoA dehydrogenase, middle domain DYM71_018650 PF02515 CoA-transferase family III DYM71_018655 PF13193 AMP-binding enzyme C-terminal domain DYM71_018655 PF00501 AMP-binding enzyme DYM71_018660 PF00378 Enoyl-CoA hydratase/isomerase DYM71_018665 PF00132 Bacterial transferase hexapeptide (six repeats) DYM71_018670 PF07180 CaiF/GrlA transcriptional regulator DYM71_018675 PF02142 MGS-like domain DYM71_018675 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain DYM71_018675 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DYM71_018680 PF00117 Glutamine amidotransferase class-I DYM71_018680 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain DYM71_018690 PF01113 Dihydrodipicolinate reductase, N-terminus DYM71_018690 PF05173 Dihydrodipicolinate reductase, C-terminus DYM71_018695 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase DYM71_018700 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase DYM71_018705 PF04223 Citrate lyase, alpha subunit (CitF) DYM71_018710 PF03328 HpcH/HpaI aldolase/citrate lyase family DYM71_018715 PF06857 Malonate decarboxylase delta subunit (MdcD) DYM71_018720 PF00583 Acetyltransferase (GNAT) family DYM71_018720 PF08218 Citrate lyase ligase C-terminal domain DYM71_018725 PF03390 2-hydroxycarboxylate transporter family DYM71_018730 PF04277 Oxaloacetate decarboxylase, gamma chain DYM71_018735 PF00364 Biotin-requiring enzyme DYM71_018735 PF00682 HMGL-like DYM71_018735 PF02436 Conserved carboxylase domain DYM71_018740 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit DYM71_018745 PF17203 Single cache domain 3 DYM71_018745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYM71_018750 PF00072 Response regulator receiver domain DYM71_018750 PF12431 Transcriptional regulator DYM71_018755 PF01156 Inosine-uridine preferring nucleoside hydrolase DYM71_018765 PF02401 LytB protein DYM71_018770 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DYM71_018775 PF01252 Signal peptidase (SPase) II DYM71_018780 PF00133 tRNA synthetases class I (I, L, M and V) DYM71_018780 PF06827 Zinc finger found in FPG and IleRS DYM71_018780 PF08264 Anticodon-binding domain of tRNA DYM71_018785 PF01687 Riboflavin kinase DYM71_018785 PF06574 FAD synthetase DYM71_018790 PF10837 Protein of unknown function (DUF2575) DYM71_018795 PF01649 Ribosomal protein S20 DYM71_018805 PF01055 Glycosyl hydrolases family 31 DYM71_018810 PF03466 LysR substrate binding domain DYM71_018810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DYM71_018815 PF06965 Na+/H+ antiporter 1 DYM71_018835 PF04055 Radical SAM superfamily DYM71_018835 PF13186 Iron-sulfur cluster-binding domain DYM71_018840 PF16385 Domain of unknown function DYM71_018840 PF00884 Sulfatase DYM71_018875 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain DYM71_018875 PF02753 Pili assembly chaperone PapD, C-terminal domain DYM71_018880 PF16970 Type-1 fimbrial protein, A DYM71_018885 PF00419 Fimbrial protein DYM71_018890 PF00419 Fimbrial protein DYM71_018895 PF00577 Outer membrane usher protein DYM71_018895 PF13954 PapC N-terminal domain DYM71_018895 PF13953 PapC C-terminal domain DYM71_018900 PF02753 Pili assembly chaperone PapD, C-terminal domain DYM71_018900 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain DYM71_018905 PF00419 Fimbrial protein DYM71_018920 PF00704 Glycosyl hydrolases family 18 DYM71_018940 PF03466 LysR substrate binding domain DYM71_018940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DYM71_018945 PF00226 DnaJ domain DYM71_018945 PF01556 DnaJ C terminal domain DYM71_018945 PF00684 DnaJ central domain DYM71_018950 PF00012 Hsp70 protein DYM71_018955 PF10807 Protein of unknown function (DUF2541) DYM71_018960 PF03981 Ubiquinol-cytochrome C chaperone DYM71_018960 PF13099 Domain of unknown function (DUF3944) DYM71_018965 PF01184 GPR1/FUN34/yaaH family DYM71_018970 PF00994 Probable molybdopterin binding domain DYM71_018975 PF00923 Transaldolase/Fructose-6-phosphate aldolase DYM71_018980 PF01235 Sodium:alanine symporter family DYM71_018985 PF03883 Peroxide stress protein YaaA DYM71_018990 PF00291 Pyridoxal-phosphate dependent enzyme DYM71_018990 PF14821 Threonine synthase N terminus DYM71_018995 PF08544 GHMP kinases C terminal DYM71_018995 PF00288 GHMP kinases N terminal domain DYM71_019000 PF03447 Homoserine dehydrogenase, NAD binding domain DYM71_019000 PF00742 Homoserine dehydrogenase DYM71_019000 PF01842 ACT domain DYM71_019000 PF00696 Amino acid kinase family DYM71_019000 PF13840 ACT domain DYM71_019005 PF08254 Threonine leader peptide DYM71_019010 PF00588 SpoU rRNA Methylase family DYM71_019020 PF00486 Transcriptional regulatory protein, C terminal DYM71_019020 PF00072 Response regulator receiver domain DYM71_019030 PF15977 Winged helix-turn-helix DNA binding DYM71_019040 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain DYM71_019040 PF02753 Pili assembly chaperone PapD, C-terminal domain DYM71_019045 PF00577 Outer membrane usher protein DYM71_019045 PF13953 PapC C-terminal domain DYM71_019045 PF13954 PapC N-terminal domain DYM71_019060 PF06123 Inner membrane protein CreD DYM71_019065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYM71_019065 PF00672 HAMP domain DYM71_019065 PF00512 His Kinase A (phospho-acceptor) domain DYM71_019070 PF00072 Response regulator receiver domain DYM71_019070 PF00486 Transcriptional regulatory protein, C terminal DYM71_019075 PF05981 CreA protein DYM71_019080 PF06445 GyrI-like small molecule binding domain DYM71_019080 PF12833 Helix-turn-helix domain DYM71_019085 PF00300 Histidine phosphatase superfamily (branch 1) DYM71_019090 PF01931 Protein of unknown function DUF84 DYM71_019095 PF01371 Trp repressor protein DYM71_019100 PF01464 Transglycosylase SLT domain DYM71_019100 PF14718 Soluble lytic murein transglycosylase L domain DYM71_019105 PF12848 ABC transporter DYM71_019105 PF00005 ABC transporter DYM71_019110 PF01381 Helix-turn-helix DYM71_019110 PF13521 AAA domain DYM71_019115 PF18073 Rubredoxin metal binding domain DYM71_019120 PF18429 Domain of unknown function (DUF5609) DYM71_019125 PF10144 Bacterial virulence factor haemolysin DYM71_019130 PF10437 Bacterial lipoate protein ligase C-terminus DYM71_019130 PF03099 Biotin/lipoate A/B protein ligase family DYM71_019135 PF07804 HipA-like C-terminal domain DYM71_019140 PF01048 Phosphorylase superfamily DYM71_019145 PF01676 Metalloenzyme superfamily DYM71_019150 PF02885 Glycosyl transferase family, helical bundle domain DYM71_019150 PF00591 Glycosyl transferase family, a/b domain DYM71_019150 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain DYM71_019155 PF01791 DeoC/LacD family aldolase DYM71_019160 PF11230 Protein of unknown function (DUF3029) DYM71_019165 PF04055 Radical SAM superfamily DYM71_019170 PF01026 TatD related DNase DYM71_019175 PF01734 Patatin-like phospholipase DYM71_019180 PF07043 Protein of unknown function (DUF1328) DYM71_019185 PF04972 BON domain DYM71_019190 PF03144 Elongation factor Tu domain 2 DYM71_019190 PF16658 Class II release factor RF3, C-terminal domain DYM71_019190 PF00009 Elongation factor Tu GTP binding domain DYM71_019195 PF13419 Haloacid dehalogenase-like hydrolase DYM71_019200 PF00583 Acetyltransferase (GNAT) family DYM71_019205 PF03603 DNA polymerase III psi subunit DYM71_019210 PF08468 Methyltransferase small domain N-terminal DYM71_019210 PF05175 Methyltransferase small domain DYM71_019230 PF07256 Protein of unknown function (DUF1435) DYM71_019235 PF00990 Diguanylate cyclase, GGDEF domain DYM71_019235 PF05230 MASE2 domain DYM71_019240 PF11575 FhuF 2Fe-2S C-terminal domain DYM71_019240 PF06276 Ferric iron reductase FhuF-like transporter DYM71_019245 PF04073 Aminoacyl-tRNA editing domain DYM71_019250 PF00196 Bacterial regulatory proteins, luxR family DYM71_019255 PF00196 Bacterial regulatory proteins, luxR family DYM71_019260 PF06738 Putative threonine/serine exporter DYM71_019265 PF12821 Threonine/Serine exporter, ThrE DYM71_019270 PF17948 DnaT DNA-binding domain DYM71_019275 PF01695 IstB-like ATP binding protein DYM71_019280 PF10696 Protein of unknown function (DUF2501) DYM71_019285 PF00884 Sulfatase DYM71_019290 PF02203 Tar ligand binding domain homologue DYM71_019290 PF00672 HAMP domain DYM71_019290 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DYM71_019295 PF13722 5TM C-terminal transporter carbon starvation CstA DYM71_019295 PF02554 Carbon starvation protein CstA DYM71_019300 PF04328 Selenoprotein, putative DYM71_019305 PF07683 Cobalamin synthesis protein cobW C-terminal domain DYM71_019305 PF02492 CobW/HypB/UreG, nucleotide-binding domain DYM71_019310 PF12833 Helix-turn-helix domain DYM71_019310 PF02311 AraC-like ligand binding domain DYM71_019315 PF01810 LysE type translocator DYM71_019320 PF08845 Toxin SymE, type I toxin-antitoxin system DYM71_019340 PF00171 Aldehyde dehydrogenase family DYM71_019345 PF04754 Putative transposase, YhgA-like DYM71_019350 PF07690 Major Facilitator Superfamily DYM71_019355 PF04286 Protein of unknown function (DUF445) DYM71_019360 PF06779 Uncharacterised MFS-type transporter YbfB DYM71_019365 PF07670 Nucleoside recognition DYM71_019370 PF07670 Nucleoside recognition DYM71_019375 PF01979 Amidohydrolase family DYM71_019380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DYM71_019380 PF03466 LysR substrate binding domain DYM71_019385 PF01177 Asp/Glu/Hydantoin racemase DYM71_019395 PF00579 tRNA synthetases class I (W and Y) DYM71_019400 PF07729 FCD domain DYM71_019400 PF00392 Bacterial regulatory proteins, gntR family DYM71_019405 PF01738 Dienelactone hydrolase family DYM71_019410 PF02537 CrcB-like protein, Camphor Resistance (CrcB) DYM71_019410 PF03625 Domain of unknown function DUF302 DYM71_019425 PF09857 Putative toxin of bacterial toxin-antitoxin pair DYM71_019430 PF13847 Methyltransferase domain DYM71_019435 PF01709 Transcriptional regulator DYM71_019445 PF12728 Helix-turn-helix domain DYM71_019445 PF00145 C-5 cytosine-specific DNA methylase DYM71_019450 PF09570 SinI restriction endonuclease DYM71_019465 PF00107 Zinc-binding dehydrogenase DYM71_019465 PF08240 Alcohol dehydrogenase GroES-like domain DYM71_019470 PF01202 Shikimate kinase DYM71_019475 PF08240 Alcohol dehydrogenase GroES-like domain DYM71_019475 PF00107 Zinc-binding dehydrogenase DYM71_019480 PF00106 short chain dehydrogenase DYM71_019485 PF02447 GntP family permease DYM71_019490 PF00356 Bacterial regulatory proteins, lacI family DYM71_019495 PF03739 Lipopolysaccharide export system permease LptF/LptG DYM71_019500 PF03739 Lipopolysaccharide export system permease LptF/LptG DYM71_019505 PF00883 Cytosol aminopeptidase family, catalytic domain DYM71_019505 PF02789 Cytosol aminopeptidase family, N-terminal domain DYM71_019510 PF04364 DNA polymerase III chi subunit, HolC DYM71_019515 PF10458 Valyl tRNA synthetase tRNA binding arm DYM71_019515 PF00133 tRNA synthetases class I (I, L, M and V) DYM71_019515 PF08264 Anticodon-binding domain of tRNA DYM71_019520 PF05987 Bacterial protein of unknown function (DUF898) DYM71_019525 PF00583 Acetyltransferase (GNAT) family DYM71_019530 PF12276 Protein of unknown function (DUF3617) DYM71_019535 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) DYM71_019540 PF06877 Regulator of ribonuclease activity B DYM71_019545 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain DYM71_019545 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain DYM71_019550 PF04074 YhcH/YjgK/YiaL DYM71_019560 PF00696 Amino acid kinase family DYM71_019565 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain DYM71_019565 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain DYM71_019570 PF03606 C4-dicarboxylate anaerobic carrier DYM71_019575 PF01316 Arginine repressor, DNA binding domain DYM71_019575 PF02863 Arginine repressor, C-terminal domain DYM71_019585 PF08052 PyrBI operon leader peptide DYM71_019590 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain DYM71_019590 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain DYM71_019595 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain DYM71_019595 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain DYM71_019600 PF01042 Endoribonuclease L-PSP DYM71_019610 PF00690 Cation transporter/ATPase, N-terminus DYM71_019610 PF00689 Cation transporting ATPase, C-terminus DYM71_019615 PF17059 MgtA leader peptide DYM71_019620 PF00356 Bacterial regulatory proteins, lacI family DYM71_019625 PF02378 Phosphotransferase system, EIIC DYM71_019625 PF00367 phosphotransferase system, EIIB DYM71_019630 PF00128 Alpha amylase, catalytic domain DYM71_019630 PF11941 Domain of unknown function (DUF3459) DYM71_019635 PF03477 ATP cone domain DYM71_019635 PF13597 Anaerobic ribonucleoside-triphosphate reductase DYM71_019645 PF05016 ParE toxin of type II toxin-antitoxin system, parDE DYM71_019650 PF04221 RelB antitoxin DYM71_019655 PF08279 HTH domain DYM71_019655 PF00874 PRD domain DYM71_019655 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DYM71_019655 PF05043 Mga helix-turn-helix domain DYM71_019660 PF07071 KDGP aldolase DYM71_019665 PF03841 L-seryl-tRNA selenium transferase DYM71_019670 PF01979 Amidohydrolase family DYM71_019700 PF07361 Cytochrome b562 DYM71_019705 PF01523 Putative modulator of DNA gyrase DYM71_019710 PF04751 Protein of unknown function (DUF615) DYM71_019715 PF01261 Xylose isomerase-like TIM barrel DYM71_019725 PF07690 Major Facilitator Superfamily DYM71_019730 PF02894 Oxidoreductase family, C-terminal alpha/beta domain DYM71_019730 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DYM71_019735 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DYM71_019735 PF00205 Thiamine pyrophosphate enzyme, central domain DYM71_019735 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DYM71_019740 PF00294 pfkB family carbohydrate kinase DYM71_019745 PF07690 Major Facilitator Superfamily DYM71_019750 PF01261 Xylose isomerase-like TIM barrel DYM71_019755 PF17189 Glycosyl hydrolase family 30 beta sandwich domain DYM71_019760 PF02894 Oxidoreductase family, C-terminal alpha/beta domain DYM71_019760 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DYM71_019765 PF01261 Xylose isomerase-like TIM barrel DYM71_019780 PF00171 Aldehyde dehydrogenase family DYM71_019785 PF04962 KduI/IolB family DYM71_019790 PF01797 Transposase IS200 like DYM71_019795 PF00083 Sugar (and other) transporter DYM71_019805 PF00083 Sugar (and other) transporter DYM71_019810 PF02685 Glucokinase DYM71_019810 PF01418 Helix-turn-helix domain, rpiR family DYM71_019810 PF01380 SIS domain DYM71_019815 PF01225 Mur ligase family, catalytic domain DYM71_019815 PF02875 Mur ligase family, glutamate ligase domain DYM71_019815 PF08245 Mur ligase middle domain DYM71_019820 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain DYM71_019825 PF00719 Inorganic pyrophosphatase DYM71_019830 PF01979 Amidohydrolase family DYM71_019835 PF07690 Major Facilitator Superfamily DYM71_019840 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like DYM71_019845 PF04357 TamB, inner membrane protein subunit of TAM complex DYM71_019850 PF07244 Surface antigen variable number repeat DYM71_019850 PF01103 Surface antigen DYM71_019850 PF17243 POTRA domain TamA domain 1 DYM71_019855 PF01625 Peptide methionine sulfoxide reductase DYM71_019860 PF00571 CBS domain DYM71_019860 PF01595 Cyclin M transmembrane N-terminal domain DYM71_019860 PF03471 Transporter associated domain DYM71_019865 PF06526 Protein of unknown function (DUF1107) DYM71_019875 PF00459 Inositol monophosphatase family DYM71_019880 PF02872 5'-nucleotidase, C-terminal domain DYM71_019880 PF00149 Calcineurin-like phosphoesterase DYM71_019885 PF01638 HxlR-like helix-turn-helix DYM71_019890 PF05368 NmrA-like family DYM71_019895 PF00892 EamA-like transporter family DYM71_019900 PF01814 Hemerythrin HHE cation binding domain DYM71_019900 PF04405 Domain of Unknown function (DUF542) DYM71_019905 PF00324 Amino acid permease DYM71_019910 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase DYM71_019910 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DYM71_019915 PF04225 Opacity-associated protein A LysM-like domain DYM71_019915 PF08525 Opacity-associated protein A N-terminal motif DYM71_019925 PF01281 Ribosomal protein L9, N-terminal domain DYM71_019925 PF03948 Ribosomal protein L9, C-terminal domain DYM71_019930 PF01084 Ribosomal protein S18 DYM71_019935 PF00436 Single-strand binding protein family DYM71_019940 PF01250 Ribosomal protein S6 DYM71_019950 PF07338 Protein of unknown function (DUF1471) DYM71_019955 PF00596 Class II Aldolase and Adducin N-terminal domain DYM71_019960 PF01261 Xylose isomerase-like TIM barrel DYM71_019965 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family DYM71_019970 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DYM71_019975 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DYM71_019980 PF03611 PTS system sugar-specific permease component DYM71_019990 PF08220 DeoR-like helix-turn-helix domain DYM71_019990 PF00455 DeoR C terminal sensor domain DYM71_019995 PF00326 Prolyl oligopeptidase family DYM71_020000 PF07338 Protein of unknown function (DUF1471) DYM71_020005 PF07338 Protein of unknown function (DUF1471) DYM71_020010 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DYM71_020010 PF02770 Acyl-CoA dehydrogenase, middle domain DYM71_020010 PF18158 Adaptive response protein AidB N-terminal domain DYM71_020015 PF03738 Glutathionylspermidine synthase preATP-grasp DYM71_020020 PF06693 Protein of unknown function (DUF1190) DYM71_020025 PF03994 Domain of Unknown Function (DUF350) DYM71_020030 PF10679 Protein of unknown function (DUF2491) DYM71_020040 PF04012 PspA/IM30 family DYM71_020045 PF09938 Uncharacterized protein conserved in bacteria (DUF2170) DYM71_020050 PF00588 SpoU rRNA Methylase family DYM71_020050 PF08032 RNA 2'-O ribose methyltransferase substrate binding DYM71_020055 PF17876 Cold shock domain DYM71_020055 PF08461 Ribonuclease R winged-helix domain DYM71_020055 PF08206 Ribonuclease B OB domain DYM71_020055 PF00773 RNB domain DYM71_020055 PF00575 S1 RNA binding domain DYM71_020060 PF02082 Transcriptional regulator DYM71_020065 PF00709 Adenylosuccinate synthetase DYM71_020070 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) DYM71_020075 PF01145 SPFH domain / Band 7 family DYM71_020080 PF01145 SPFH domain / Band 7 family DYM71_020080 PF12221 Bacterial membrane protein N terminal DYM71_020085 PF01926 50S ribosome-binding GTPase DYM71_020085 PF13167 GTP-binding GTPase N-terminal DYM71_020085 PF16360 GTP-binding GTPase Middle Region DYM71_020090 PF17209 Hfq protein DYM71_020100 PF08676 MutL C terminal dimerisation domain DYM71_020100 PF01119 DNA mismatch repair protein, C-terminal domain DYM71_020105 PF01520 N-acetylmuramoyl-L-alanine amidase DYM71_020110 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE DYM71_020115 PF03853 YjeF-related protein N-terminus DYM71_020115 PF01256 Carbohydrate kinase DYM71_020120 PF08331 Domain of unknown function (DUF1730) DYM71_020140 PF00497 Bacterial extracellular solute-binding proteins, family 3 DYM71_020145 PF00929 Exonuclease DYM71_020150 PF03193 RsgA GTPase DYM71_020155 PF02666 Phosphatidylserine decarboxylase DYM71_020160 PF12794 Mechanosensitive ion channel inner membrane domain 1 DYM71_020160 PF00924 Mechanosensitive ion channel DYM71_020160 PF12795 Mechanosensitive ion channel porin domain DYM71_020170 PF13520 Amino acid permease DYM71_020175 PF00152 tRNA synthetases class II (D, K and N) DYM71_020180 PF02910 Fumarate reductase flavoprotein C-term DYM71_020180 PF00890 FAD binding domain DYM71_020185 PF13085 2Fe-2S iron-sulfur cluster binding domain DYM71_020185 PF13183 4Fe-4S dicluster domain DYM71_020190 PF02300 Fumarate reductase subunit C DYM71_020195 PF02313 Fumarate reductase subunit D DYM71_020200 PF08212 Lipocalin-like domain DYM71_020205 PF00893 Small Multidrug Resistance protein DYM71_020210 PF00196 Bacterial regulatory proteins, luxR family DYM71_020215 PF08085 Entericidin EcnA/B family DYM71_020220 PF08085 Entericidin EcnA/B family DYM71_020225 PF09285 Elongation factor P, C-terminal DYM71_020225 PF08207 Elongation factor P (EF-P) KOW-like domain DYM71_020225 PF01132 Elongation factor P (EF-P) OB domain DYM71_020230 PF04055 Radical SAM superfamily DYM71_020235 PF15922 YjeJ-like DYM71_020240 PF13698 Domain of unknown function (DUF4156) DYM71_020245 PF00118 TCP-1/cpn60 chaperonin family DYM71_020250 PF00166 Chaperonin 10 Kd subunit DYM71_020255 PF13520 Amino acid permease DYM71_020260 PF04186 FxsA cytoplasmic membrane protein DYM71_020265 PF10415 Fumarase C C-terminus DYM71_020265 PF00206 Lyase DYM71_020270 PF03605 Anaerobic c4-dicarboxylate membrane transporter DYM71_020275 PF03091 CutA1 divalent ion tolerance protein DYM71_020280 PF02683 Cytochrome C biogenesis protein transmembrane region DYM71_020280 PF11412 Disulphide bond corrector protein DsbC DYM71_020300 PF01569 PAP2 superfamily DYM71_020325 PF12833 Helix-turn-helix domain DYM71_020330 PF00072 Response regulator receiver domain DYM71_020330 PF00196 Bacterial regulatory proteins, luxR family DYM71_020335 PF00005 ABC transporter DYM71_020350 PF06977 SdiA-regulated DYM71_020360 PF02613 Nitrate reductase delta subunit DYM71_020365 PF04976 DMSO reductase anchor subunit (DmsC) DYM71_020370 PF12800 4Fe-4S binding domain DYM71_020370 PF13247 4Fe-4S dicluster domain DYM71_020375 PF01568 Molydopterin dinucleotide binding domain DYM71_020375 PF00384 Molybdopterin oxidoreductase DYM71_020375 PF04879 Molybdopterin oxidoreductase Fe4S4 domain DYM71_020380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYM71_020380 PF00989 PAS fold DYM71_020380 PF17203 Single cache domain 3 DYM71_020380 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain DYM71_020385 PF00072 Response regulator receiver domain DYM71_020395 PF03605 Anaerobic c4-dicarboxylate membrane transporter DYM71_020400 PF05681 Fumarate hydratase (Fumerase) DYM71_020400 PF05683 Fumarase C-terminus DYM71_020410 PF02056 Family 4 glycosyl hydrolase DYM71_020410 PF11975 Family 4 glycosyl hydrolase C-terminal domain DYM71_020415 PF12833 Helix-turn-helix domain DYM71_020420 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain DYM71_020420 PF01276 Orn/Lys/Arg decarboxylase, major domain DYM71_020420 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain DYM71_020425 PF12833 Helix-turn-helix domain DYM71_020430 PF13520 Amino acid permease DYM71_020435 PF00884 Sulfatase DYM71_020435 PF08019 Phosphoethanolamine transferase EptA/EptB DYM71_020440 PF00486 Transcriptional regulatory protein, C terminal DYM71_020440 PF00072 Response regulator receiver domain DYM71_020445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYM71_020445 PF00512 His Kinase A (phospho-acceptor) domain DYM71_020455 PF00083 Sugar (and other) transporter DYM71_020455 PF08946 Osmosensory transporter coiled coil DYM71_020460 PF08274 PhnA Zinc-Ribbon DYM71_020460 PF03831 PhnA domain DYM71_020465 PF06983 3-demethylubiquinone-9 3-methyltransferase DYM71_020470 PF00583 Acetyltransferase (GNAT) family DYM71_020485 PF08238 Sel1 repeat DYM71_020490 PF00375 Sodium:dicarboxylate symporter family DYM71_020500 PF03918 Cytochrome C biogenesis protein DYM71_020505 PF01578 Cytochrome C assembly protein DYM71_020505 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal DYM71_020510 PF03916 Polysulphide reductase, NrfD DYM71_020515 PF00037 4Fe-4S binding domain DYM71_020515 PF13247 4Fe-4S dicluster domain DYM71_020520 PF13435 Cytochrome c554 and c-prime DYM71_020520 PF09699 Doubled CXXCH motif (Paired_CXXCH_1) DYM71_020525 PF02335 Cytochrome c552 DYM71_020530 PF16177 Acetyl-coenzyme A synthetase N-terminus DYM71_020530 PF13193 AMP-binding enzyme C-terminal domain DYM71_020530 PF00501 AMP-binding enzyme DYM71_020535 PF04341 Protein of unknown function, DUF485 DYM71_020540 PF00474 Sodium:solute symporter family DYM71_020545 PF04172 LrgB-like family DYM71_020550 PF03788 LrgA family DYM71_020555 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DYM71_020555 PF03466 LysR substrate binding domain DYM71_020560 PF00999 Sodium/hydrogen exchanger family DYM71_020565 PF00860 Permease family DYM71_020575 PF00376 MerR family regulatory protein DYM71_020575 PF09278 MerR, DNA binding DYM71_020580 PF12833 Helix-turn-helix domain DYM71_020585 PF12792 CSS motif domain associated with EAL DYM71_020585 PF00563 EAL domain DYM71_020590 PF15940 Family of unknown function DYM71_020595 PF00005 ABC transporter DYM71_020595 PF00664 ABC transporter transmembrane region DYM71_020625 PF00436 Single-strand binding protein family DYM71_020630 PF00005 ABC transporter DYM71_020630 PF17755 UvrA DNA-binding domain DYM71_020630 PF17760 UvrA interaction domain DYM71_020645 PF04237 YjbR DYM71_020650 PF01894 Uncharacterised protein family UPF0047 DYM71_020655 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) DYM71_020660 PF00155 Aminotransferase class I and II DYM71_020670 PF01168 Alanine racemase, N-terminal domain DYM71_020670 PF00842 Alanine racemase, C-terminal domain DYM71_020675 PF00772 DnaB-like helicase N terminal domain DYM71_020675 PF03796 DnaB-like helicase C terminal domain DYM71_020680 PF00107 Zinc-binding dehydrogenase DYM71_020680 PF08240 Alcohol dehydrogenase GroES-like domain DYM71_020685 PF09583 Phage shock protein G (Phageshock_PspG) DYM71_020690 PF01207 Dihydrouridine synthase (Dus) DYM71_020700 PF01475 Ferric uptake regulator family DYM71_020705 PF05532 CsbD-like DYM71_020715 PF01554 MatE DYM71_020720 PF00717 Peptidase S24-like DYM71_020720 PF01726 LexA DNA binding domain DYM71_020725 PF01219 Prokaryotic diacylglycerol kinase DYM71_020730 PF01553 Acyltransferase DYM71_020735 PF01040 UbiA prenyltransferase family DYM71_020740 PF04345 Chorismate lyase DYM71_020745 PF07148 Maltose operon periplasmic protein precursor (MalM) DYM71_020750 PF02264 LamB porin DYM71_020755 PF17912 MalK OB fold domain DYM71_020755 PF00005 ABC transporter DYM71_020760 PF01547 Bacterial extracellular solute-binding protein DYM71_020765 PF14785 Maltose transport system permease protein MalF P2 domain DYM71_020765 PF00528 Binding-protein-dependent transport system inner membrane component DYM71_020770 PF00528 Binding-protein-dependent transport system inner membrane component DYM71_020775 PF06146 Phosphate-starvation-inducible E DYM71_020780 PF06082 Exopolysaccharide biosynthesis protein YbjH DYM71_020785 PF06251 Capsule biosynthesis GfcC DYM71_020790 PF11102 Group 4 capsule polysaccharide lipoprotein gfcB, YjbF DYM71_020800 PF00342 Phosphoglucose isomerase DYM71_020805 PF01842 ACT domain DYM71_020805 PF00696 Amino acid kinase family DYM71_020810 PF08765 Mor transcription activator family DYM71_020885 PF04138 GtrA-like protein DYM71_020890 PF00535 Glycosyl transferase family 2 DYM71_020915 PF07484 Phage Tail Collar Domain DYM71_020915 PF03335 Phage tail fibre repeat DYM71_020915 PF08400 Prophage tail fibre N-terminal DYM71_020940 PF01758 Sodium Bile acid symporter family DYM71_020945 PF11656 YjbD family (DUF3811) DYM71_020950 PF00849 RNA pseudouridylate synthase DYM71_020950 PF01479 S4 domain DYM71_020955 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) DYM71_020965 PF03575 Peptidase family S51 DYM71_020970 PF02690 Na+/Pi-cotransporter DYM71_020975 PF02965 Vitamin B12 dependent methionine synthase, activation domain DYM71_020975 PF02607 B12 binding domain DYM71_020975 PF02574 Homocysteine S-methyltransferase DYM71_020975 PF00809 Pterin binding enzyme DYM71_020975 PF02310 B12 binding domain DYM71_020980 PF09339 IclR helix-turn-helix domain DYM71_020980 PF01614 Bacterial transcriptional regulator DYM71_020990 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) DYM71_020995 PF00463 Isocitrate lyase family DYM71_021000 PF01274 Malate synthase DYM71_021005 PF04204 Homoserine O-succinyltransferase DYM71_021010 PF13673 Acetyltransferase (GNAT) domain DYM71_021035 PF01808 AICARFT/IMPCHase bienzyme DYM71_021035 PF02142 MGS-like domain DYM71_021040 PF02844 Phosphoribosylglycinamide synthetase, N domain DYM71_021040 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain DYM71_021040 PF02843 Phosphoribosylglycinamide synthetase, C domain DYM71_021045 PF00072 Response regulator receiver domain DYM71_021045 PF00158 Sigma-54 interaction domain DYM71_021045 PF02954 Bacterial regulatory protein, Fis family DYM71_021050 PF00512 His Kinase A (phospho-acceptor) domain DYM71_021050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYM71_021055 PF13801 Heavy-metal resistance DYM71_021060 PF07356 Protein of unknown function (DUF1481) DYM71_021065 PF00216 Bacterial DNA-binding protein DYM71_021070 PF04222 Protein of unknown function (DUF416) DYM71_021075 PF04493 Endonuclease V DYM71_021080 PF01208 Uroporphyrinogen decarboxylase (URO-D) DYM71_021085 PF09297 NADH pyrophosphatase zinc ribbon domain DYM71_021085 PF00293 NUDIX domain DYM71_021090 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ DYM71_021095 PF01964 Radical SAM ThiC family DYM71_021095 PF13667 ThiC-associated domain DYM71_021100 PF02581 Thiamine monophosphate synthase DYM71_021105 PF00899 ThiF family DYM71_021110 PF02597 ThiS family DYM71_021115 PF05690 Thiazole biosynthesis protein ThiG DYM71_021120 PF06968 Biotin and Thiamin Synthesis associated domain DYM71_021120 PF04055 Radical SAM superfamily DYM71_021140 PF04997 RNA polymerase Rpb1, domain 1 DYM71_021140 PF04998 RNA polymerase Rpb1, domain 5 DYM71_021140 PF05000 RNA polymerase Rpb1, domain 4 DYM71_021140 PF04983 RNA polymerase Rpb1, domain 3 DYM71_021140 PF00623 RNA polymerase Rpb1, domain 2 DYM71_021145 PF00562 RNA polymerase Rpb2, domain 6 DYM71_021145 PF10385 RNA polymerase beta subunit external 1 domain DYM71_021145 PF04565 RNA polymerase Rpb2, domain 3 DYM71_021145 PF04561 RNA polymerase Rpb2, domain 2 DYM71_021145 PF04563 RNA polymerase beta subunit DYM71_021145 PF04560 RNA polymerase Rpb2, domain 7 DYM71_021150 PF00542 Ribosomal protein L7/L12 C-terminal domain DYM71_021150 PF16320 Ribosomal protein L7/L12 dimerisation domain DYM71_021155 PF00466 Ribosomal protein L10 DYM71_021160 PF00687 Ribosomal protein L1p/L10e family DYM71_021165 PF03946 Ribosomal protein L11, N-terminal domain DYM71_021165 PF00298 Ribosomal protein L11, RNA binding domain DYM71_021170 PF02357 Transcription termination factor nusG DYM71_021170 PF00467 KOW motif DYM71_021175 PF00584 SecE/Sec61-gamma subunits of protein translocation complex DYM71_021180 PF00009 Elongation factor Tu GTP binding domain DYM71_021180 PF03144 Elongation factor Tu domain 2 DYM71_021180 PF03143 Elongation factor Tu C-terminal domain DYM71_021210 PF00485 Phosphoribulokinase / Uridine kinase family DYM71_021215 PF08279 HTH domain DYM71_021215 PF03099 Biotin/lipoate A/B protein ligase family DYM71_021215 PF02237 Biotin protein ligase C terminal domain DYM71_021220 PF01565 FAD binding domain DYM71_021220 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain DYM71_021250 PF01177 Asp/Glu/Hydantoin racemase DYM71_021255 PF00593 TonB dependent receptor DYM71_021255 PF07715 TonB-dependent Receptor Plug Domain DYM71_021260 PF05958 tRNA (Uracil-5-)-methyltransferase DYM71_021265 PF07226 Protein of unknown function (DUF1422) DYM71_021270 PF00440 Bacterial regulatory proteins, tetR family DYM71_021275 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DYM71_021275 PF07992 Pyridine nucleotide-disulphide oxidoreductase DYM71_021280 PF03466 LysR substrate binding domain DYM71_021280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DYM71_021285 PF14698 Argininosuccinate lyase C-terminal DYM71_021285 PF00206 Lyase DYM71_021290 PF00696 Amino acid kinase family DYM71_021295 PF02774 Semialdehyde dehydrogenase, dimerisation domain DYM71_021295 PF01118 Semialdehyde dehydrogenase, NAD binding domain DYM71_021300 PF01546 Peptidase family M20/M25/M40 DYM71_021300 PF07687 Peptidase dimerisation domain DYM71_021310 PF00311 Phosphoenolpyruvate carboxylase DYM71_021315 PF00884 Sulfatase DYM71_021320 PF12833 Helix-turn-helix domain DYM71_021325 PF00923 Transaldolase/Fructose-6-phosphate aldolase DYM71_021330 PF00465 Iron-containing alcohol dehydrogenase DYM71_021335 PF06940 Domain of unknown function (DUF1287) DYM71_021340 PF00141 Peroxidase DYM71_021345 PF02219 Methylenetetrahydrofolate reductase DYM71_021350 PF17936 Bacterial Ig domain DYM71_021350 PF00149 Calcineurin-like phosphoesterase DYM71_021350 PF02872 5'-nucleotidase, C-terminal domain DYM71_021365 PF00924 Mechanosensitive ion channel DYM71_021365 PF05552 Conserved TM helix DYM71_021370 PF03447 Homoserine dehydrogenase, NAD binding domain DYM71_021370 PF00696 Amino acid kinase family DYM71_021370 PF00742 Homoserine dehydrogenase DYM71_021375 PF01053 Cys/Met metabolism PLP-dependent enzyme DYM71_021380 PF01340 Met Apo-repressor, MetJ DYM71_021385 PF05935 Arylsulfotransferase (ASST) DYM71_021385 PF17425 Arylsulfotransferase Ig-like domain DYM71_021395 PF01197 Ribosomal protein L31 DYM71_021400 PF00270 DEAD/DEAH box helicase DYM71_021400 PF18319 PriA DNA helicase Cys-rich region (CRR) domain DYM71_021400 PF17764 3′ DNA-binding domain (3′BD) DYM71_021400 PF18074 Primosomal protein N C-terminal domain DYM71_021400 PF00271 Helicase conserved C-terminal domain DYM71_021405 PF00356 Bacterial regulatory proteins, lacI family DYM71_021410 PF05036 Sporulation related domain DYM71_021415 PF00227 Proteasome subunit DYM71_021420 PF07724 AAA domain (Cdc48 subfamily) DYM71_021420 PF00004 ATPase family associated with various cellular activities (AAA) DYM71_021420 PF10431 C-terminal, D2-small domain, of ClpB protein DYM71_021425 PF01040 UbiA prenyltransferase family DYM71_021430 PF03737 Aldolase/RraA DYM71_021435 PF06005 Cell division protein ZapB DYM71_021440 PF00230 Major intrinsic protein DYM71_021445 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DYM71_021445 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DYM71_021450 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded DYM71_021455 PF00175 Oxidoreductase NAD-binding domain DYM71_021455 PF00970 Oxidoreductase FAD-binding domain DYM71_021460 PF05656 Protein of unknown function (DUF805) DYM71_021465 PF07305 Protein of unknown function (DUF1454) DYM71_021470 PF00121 Triosephosphate isomerase DYM71_021475 PF00834 Ribulose-phosphate 3 epimerase family DYM71_021480 PF03992 Antibiotic biosynthesis monooxygenase DYM71_021485 PF01791 DeoC/LacD family aldolase DYM71_021490 PF13407 Periplasmic binding protein domain DYM71_021495 PF02653 Branched-chain amino acid transport system / permease component DYM71_021500 PF02653 Branched-chain amino acid transport system / permease component DYM71_021505 PF00005 ABC transporter DYM71_021510 PF04198 Putative sugar-binding domain DYM71_021515 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DYM71_021515 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DYM71_021535 PF00155 Aminotransferase class I and II DYM71_021535 PF00392 Bacterial regulatory proteins, gntR family DYM71_021545 PF00294 pfkB family carbohydrate kinase DYM71_021555 PF02611 CDP-diacylglycerol pyrophosphatase DYM71_021565 PF00365 Phosphofructokinase DYM71_021570 PF16916 Dimerisation domain of Zinc Transporter DYM71_021570 PF01545 Cation efflux family DYM71_021575 PF04606 Ogr/Delta-like zinc finger DYM71_021615 PF02796 Helix-turn-helix domain of resolvase DYM71_021615 PF00239 Resolvase, N terminal domain DYM71_021620 PF07484 Phage Tail Collar Domain DYM71_021625 PF02413 Caudovirales tail fibre assembly protein, lambda gpK DYM71_021630 PF02413 Caudovirales tail fibre assembly protein, lambda gpK DYM71_021735 PF06114 IrrE N-terminal-like domain DYM71_021740 PF05840 Bacteriophage replication gene A protein (GPA) DYM71_021780 PF02899 Phage integrase, N-terminal SAM-like domain DYM71_021780 PF00589 Phage integrase family DYM71_021785 PF07813 LTXXQ motif family protein DYM71_021790 PF00072 Response regulator receiver domain DYM71_021790 PF00486 Transcriptional regulatory protein, C terminal DYM71_021795 PF00512 His Kinase A (phospho-acceptor) domain DYM71_021795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYM71_021795 PF00672 HAMP domain DYM71_021795 PF16527 Two-component sensor protein CpxA, periplasmic domain DYM71_021805 PF03475 3-alpha domain DYM71_021805 PF03473 MOSC domain DYM71_021810 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain DYM71_021810 PF02777 Iron/manganese superoxide dismutases, C-terminal domain DYM71_021815 PF03480 Bacterial extracellular solute-binding protein, family 7 DYM71_021820 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component DYM71_021825 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component DYM71_021830 PF06178 Oligogalacturonate-specific porin protein (KdgM) DYM71_021835 PF06379 L-rhamnose-proton symport protein (RhaT) DYM71_021840 PF12833 Helix-turn-helix domain DYM71_021840 PF02311 AraC-like ligand binding domain DYM71_021845 PF02311 AraC-like ligand binding domain DYM71_021845 PF12833 Helix-turn-helix domain DYM71_021850 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DYM71_021850 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DYM71_021855 PF06134 L-rhamnose isomerase (RhaA) DYM71_021860 PF00596 Class II Aldolase and Adducin N-terminal domain DYM71_021865 PF00465 Iron-containing alcohol dehydrogenase DYM71_021870 PF05336 L-rhamnose mutarotase DYM71_021880 PF03591 AzlC protein DYM71_021890 PF12889 Protein of unknown function (DUF3829) DYM71_021895 PF12889 Protein of unknown function (DUF3829) DYM71_021900 PF02634 FdhD/NarQ family DYM71_021910 PF09163 Formate dehydrogenase N, transmembrane DYM71_021910 PF13247 4Fe-4S dicluster domain DYM71_021915 PF01292 Prokaryotic cytochrome b561 DYM71_021920 PF04216 Protein involved in formate dehydrogenase formation DYM71_021930 PF06296 RelE toxin of RelE / RelB toxin-antitoxin system DYM71_021935 PF07859 alpha/beta hydrolase fold DYM71_021940 PF09907 HigB_toxin, RelE-like toxic component of a toxin-antitoxin system DYM71_021945 PF01381 Helix-turn-helix DYM71_021950 PF09500 Putative thioesterase (yiiD_Cterm) DYM71_021950 PF00583 Acetyltransferase (GNAT) family DYM71_021955 PF02580 D-Tyr-tRNA(Tyr) deacylase DYM71_021960 PF03631 Virulence factor BrkB DYM71_021965 PF13419 Haloacid dehalogenase-like hydrolase DYM71_021970 PF00455 DeoR C terminal sensor domain DYM71_021970 PF08220 DeoR-like helix-turn-helix domain DYM71_021975 PF00294 pfkB family carbohydrate kinase DYM71_021980 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase DYM71_021980 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase DYM71_021985 PF01791 DeoC/LacD family aldolase DYM71_021995 PF01263 Aldose 1-epimerase DYM71_022000 PF01055 Glycosyl hydrolases family 31 DYM71_022015 PF06178 Oligogalacturonate-specific porin protein (KdgM) DYM71_022035 PF04055 Radical SAM superfamily DYM71_022055 PF00120 Glutamine synthetase, catalytic domain DYM71_022055 PF03951 Glutamine synthetase, beta-Grasp domain DYM71_022060 PF00512 His Kinase A (phospho-acceptor) domain DYM71_022060 PF00989 PAS fold DYM71_022060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYM71_022065 PF02954 Bacterial regulatory protein, Fis family DYM71_022065 PF00158 Sigma-54 interaction domain DYM71_022065 PF00072 Response regulator receiver domain DYM71_022075 PF04055 Radical SAM superfamily DYM71_022075 PF06969 HemN C-terminal domain DYM71_022080 PF04220 Der GTPase activator (YihI) DYM71_022090 PF01926 50S ribosome-binding GTPase DYM71_022095 PF01612 3'-5' exonuclease DYM71_022095 PF00476 DNA polymerase family A DYM71_022095 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain DYM71_022095 PF01367 5'-3' exonuclease, C-terminal SAM fold DYM71_022100 PF01553 Acyltransferase DYM71_022105 PF01323 DSBA-like thioredoxin domain DYM71_022110 PF01636 Phosphotransferase enzyme family DYM71_022115 PF06288 Protein of unknown function (DUF1040) DYM71_022120 PF12804 MobA-like NTP transferase domain DYM71_022125 PF03205 Molybdopterin guanine dinucleotide synthesis protein B DYM71_022155 PF12724 Flavodoxin domain DYM71_022160 PF02386 Cation transport protein DYM71_022165 PF09186 Domain of unknown function (DUF1949) DYM71_022165 PF01205 Uncharacterized protein family UPF0029 DYM71_022170 PF00557 Metallopeptidase family M24 DYM71_022175 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain DYM71_022175 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DYM71_022175 PF00378 Enoyl-CoA hydratase/isomerase DYM71_022180 PF02803 Thiolase, C-terminal domain DYM71_022180 PF00108 Thiolase, N-terminal domain DYM71_022185 PF17425 Arylsulfotransferase Ig-like domain DYM71_022185 PF05935 Arylsulfotransferase (ASST) DYM71_022190 PF00175 Oxidoreductase NAD-binding domain DYM71_022190 PF00970 Oxidoreductase FAD-binding domain DYM71_022195 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase DYM71_022200 PF02357 Transcription termination factor nusG DYM71_022205 PF01026 TatD related DNase DYM71_022210 PF00902 Sec-independent protein translocase protein (TatC) DYM71_022220 PF02416 mttA/Hcf106 family DYM71_022225 PF03109 ABC1 family DYM71_022230 PF02036 SCP-2 sterol transfer family DYM71_022235 PF01209 ubiE/COQ5 methyltransferase family DYM71_022240 PF02646 RmuC family DYM71_022245 PF01048 Phosphorylase superfamily DYM71_022250 PF01738 Dienelactone hydrolase family DYM71_022255 PF13186 Iron-sulfur cluster-binding domain DYM71_022255 PF04055 Radical SAM superfamily DYM71_022260 PF01717 Cobalamin-independent synthase, Catalytic domain DYM71_022260 PF08267 Cobalamin-independent synthase, N-terminal domain DYM71_022265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DYM71_022265 PF03466 LysR substrate binding domain DYM71_022270 PF00892 EamA-like transporter family DYM71_022280 PF12146 Serine aminopeptidase, S33 DYM71_022285 PF01810 LysE type translocator DYM71_022290 PF01810 LysE type translocator DYM71_022295 PF16124 RecQ zinc-binding DYM71_022295 PF00270 DEAD/DEAH box helicase DYM71_022295 PF00271 Helicase conserved C-terminal domain DYM71_022295 PF09382 RQC domain DYM71_022295 PF00570 HRDC domain DYM71_022300 PF02253 Phospholipase A1 DYM71_022305 PF03061 Thioesterase superfamily DYM71_022310 PF00892 EamA-like transporter family DYM71_022325 PF01544 CorA-like Mg2+ transporter protein DYM71_022330 PF00580 UvrD/REP helicase N-terminal domain DYM71_022330 PF13361 UvrD-like helicase C-terminal domain DYM71_022335 PF13419 Haloacid dehalogenase-like hydrolase DYM71_022340 PF02899 Phage integrase, N-terminal SAM-like domain DYM71_022340 PF00589 Phage integrase family DYM71_022345 PF04340 Protein of unknown function, DUF484 DYM71_022350 PF01678 Diaminopimelate epimerase DYM71_022355 PF13627 Prokaryotic lipoprotein-attachment site DYM71_022375 PF01491 Frataxin-like domain DYM71_022380 PF01295 Adenylate cyclase, class-I DYM71_022380 PF12633 Adenylate cyclase NT domain DYM71_022385 PF03900 Porphobilinogen deaminase, C-terminal domain DYM71_022385 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain DYM71_022390 PF02602 Uroporphyrinogen-III synthase HemD DYM71_022395 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase DYM71_022400 PF07719 Tetratricopeptide repeat DYM71_022400 PF07219 HemY protein N-terminus DYM71_022425 PF00324 Amino acid permease DYM71_022430 PF03808 Glycosyl transferase WecB/TagA/CpsF family DYM71_022435 PF06899 WzyE protein, O-antigen assembly polymerase DYM71_022440 PF07429 4-alpha-L-fucosyltransferase glycosyl transferase group 56 DYM71_022445 PF01943 Polysaccharide biosynthesis protein DYM71_022450 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family DYM71_022460 PF00483 Nucleotidyl transferase DYM71_022465 PF16363 GDP-mannose 4,6 dehydratase DYM71_022470 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain DYM71_022470 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain DYM71_022470 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain DYM71_022475 PF02350 UDP-N-acetylglucosamine 2-epimerase DYM71_022480 PF02706 Chain length determinant protein DYM71_022485 PF00953 Glycosyl transferase family 4 DYM71_022490 PF07497 Rho termination factor, RNA-binding domain DYM71_022490 PF07498 Rho termination factor, N-terminal domain DYM71_022490 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DYM71_022500 PF00085 Thioredoxin DYM71_022505 PF00270 DEAD/DEAH box helicase DYM71_022505 PF00271 Helicase conserved C-terminal domain DYM71_022510 PF02541 Ppx/GppA phosphatase family DYM71_022515 PF00580 UvrD/REP helicase N-terminal domain DYM71_022515 PF13361 UvrD-like helicase C-terminal domain DYM71_022530 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain DYM71_022530 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain DYM71_022535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DYM71_022535 PF03466 LysR substrate binding domain DYM71_022550 PF00585 C-terminal regulatory domain of Threonine dehydratase DYM71_022550 PF00291 Pyridoxal-phosphate dependent enzyme DYM71_022555 PF00920 Dehydratase family DYM71_022560 PF01063 Amino-transferase class IV DYM71_022570 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DYM71_022570 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DYM71_022570 PF00205 Thiamine pyrophosphate enzyme, central domain DYM71_022575 PF08046 IlvGEDA operon leader peptide DYM71_022580 PF13335 Magnesium chelatase, subunit ChlI C-terminal DYM71_022580 PF01078 Magnesium chelatase, subunit ChlI DYM71_022585 PF04219 Protein of unknown function, DUF DYM71_022590 PF03466 LysR substrate binding domain DYM71_022590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DYM71_022625 PF07729 FCD domain DYM71_022625 PF00392 Bacterial regulatory proteins, gntR family DYM71_022630 PF07690 Major Facilitator Superfamily DYM71_022635 PF00356 Bacterial regulatory proteins, lacI family DYM71_022640 PF00294 pfkB family carbohydrate kinase DYM71_022645 PF13407 Periplasmic binding protein domain DYM71_022650 PF02653 Branched-chain amino acid transport system / permease component DYM71_022655 PF00005 ABC transporter DYM71_022660 PF05025 RbsD / FucU transport protein family DYM71_022665 PF02705 K+ potassium transporter DYM71_022670 PF12592 Protein of unknown function (DUF3763) DYM71_022670 PF17868 AAA lid domain DYM71_022670 PF07728 AAA domain (dynein-related subfamily) DYM71_022675 PF05762 VWA domain containing CoxE-like protein DYM71_022680 PF03590 Aspartate-ammonia ligase DYM71_022685 PF01037 Lrp/AsnC ligand binding domain DYM71_022690 PF00258 Flavodoxin DYM71_022695 PF13932 GidA associated domain DYM71_022695 PF01134 Glucose inhibited division protein A DYM71_022700 PF02527 rRNA small subunit methyltransferase G DYM71_022705 PF03899 ATP synthase I chain DYM71_022710 PF00119 ATP synthase A chain DYM71_022715 PF00137 ATP synthase subunit C DYM71_022720 PF00430 ATP synthase B/B' CF(0) DYM71_022725 PF00213 ATP synthase delta (OSCP) subunit DYM71_022730 PF00306 ATP synthase alpha/beta chain, C terminal domain DYM71_022730 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DYM71_022730 PF02874 ATP synthase alpha/beta family, beta-barrel domain DYM71_022735 PF00231 ATP synthase DYM71_022740 PF02874 ATP synthase alpha/beta family, beta-barrel domain DYM71_022740 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DYM71_022745 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain DYM71_022745 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain DYM71_022755 PF12804 MobA-like NTP transferase domain DYM71_022755 PF00132 Bacterial transferase hexapeptide (six repeats) DYM71_022760 PF01380 SIS domain DYM71_022765 PF12793 Sugar transport-related sRNA regulator N-term DYM71_022765 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DYM71_022770 PF08501 Shikimate dehydrogenase substrate binding domain DYM71_022775 PF02378 Phosphotransferase system, EIIC DYM71_022775 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DYM71_022780 PF12849 PBP superfamily domain DYM71_022785 PF00528 Binding-protein-dependent transport system inner membrane component DYM71_022790 PF00528 Binding-protein-dependent transport system inner membrane component DYM71_022795 PF00005 ABC transporter DYM71_022800 PF01895 PhoU domain DYM71_022805 PF13419 Haloacid dehalogenase-like hydrolase DYM71_022810 PF00860 Permease family DYM71_022815 PF03358 NADPH-dependent FMN reductase DYM71_022825 PF03466 LysR substrate binding domain DYM71_022825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DYM71_022830 PF07690 Major Facilitator Superfamily DYM71_022835 PF12631 MnmE helical domain DYM71_022835 PF10396 GTP-binding protein TrmE N-terminus DYM71_022835 PF01926 50S ribosome-binding GTPase DYM71_022840 PF14849 YidC periplasmic domain DYM71_022840 PF02096 60Kd inner membrane protein DYM71_022845 PF01809 Putative membrane protein insertion efficiency factor DYM71_022850 PF00825 Ribonuclease P DYM71_022855 PF00468 Ribosomal protein L34 DYM71_022860 PF07715 TonB-dependent Receptor Plug Domain DYM71_022860 PF00593 TonB dependent receptor DYM71_022865 PF01510 N-acetylmuramoyl-L-alanine amidase DYM71_022880 PF01053 Cys/Met metabolism PLP-dependent enzyme DYM71_022885 PF03222 Tryptophan/tyrosine permease family DYM71_022890 PF00158 Sigma-54 interaction domain DYM71_022890 PF00072 Response regulator receiver domain DYM71_022890 PF02954 Bacterial regulatory protein, Fis family DYM71_022910 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase DYM71_022950 PF00563 EAL domain DYM71_022950 PF00196 Bacterial regulatory proteins, luxR family DYM71_022955 PF12951 Passenger-associated-transport-repeat DYM71_022960 PF02357 Transcription termination factor nusG DYM71_022985 PF00664 ABC transporter transmembrane region DYM71_022985 PF00005 ABC transporter DYM71_022985 PF03412 Peptidase C39 family DYM71_023045 PF00419 Fimbrial protein DYM71_023045 PF09222 Fimbrial adhesin F17-AG, lectin domain DYM71_023050 PF13953 PapC C-terminal domain DYM71_023050 PF00577 Outer membrane usher protein DYM71_023050 PF13954 PapC N-terminal domain DYM71_023055 PF02753 Pili assembly chaperone PapD, C-terminal domain DYM71_023055 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain DYM71_023060 PF16970 Type-1 fimbrial protein, A DYM71_023085 PF01845 CcdB protein DYM71_023090 PF07362 Post-segregation antitoxin CcdA DYM71_023095 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin DYM71_023100 PF01850 PIN domain DYM71_023105 PF06977 SdiA-regulated DYM71_023130 PF02432 Fimbrial, major and minor subunit DYM71_023140 PF17547 Family of unknown function (DUF5462) DYM71_023145 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain DYM71_023160 PF03333 Adhesin biosynthesis transcription regulatory protein DYM71_023180 PF07282 Putative transposase DNA-binding domain DYM71_023180 PF01385 Probable transposase DYM71_023180 PF12323 Helix-turn-helix domain DYM71_023195 PF04754 Putative transposase, YhgA-like DYM71_023215 PF05321 Haemolysin expression modulating protein DYM71_023280 PF01548 Transposase DYM71_023280 PF02371 Transposase IS116/IS110/IS902 family DYM71_023300 PF08494 DEAD/H associated DYM71_023300 PF00271 Helicase conserved C-terminal domain DYM71_023300 PF00270 DEAD/DEAH box helicase DYM71_023310 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system DYM71_023325 PF13358 DDE superfamily endonuclease DYM71_023350 PF02705 K+ potassium transporter DYM71_023365 PF01051 Initiator Replication protein DYM71_023370 PF13614 AAA domain DYM71_023375 PF02195 ParB-like nuclease domain DYM71_023375 PF18090 Centromere-binding protein HTH domain DYM71_023410 PF04002 RadC-like JAB domain DYM71_023415 PF13610 DDE domain DYM71_023430 PF02374 Anion-transporting ATPase DYM71_023435 PF06953 Arsenical resistance operon trans-acting repressor ArsD DYM71_023445 PF03358 NADPH-dependent FMN reductase DYM71_023465 PF00005 ABC transporter DYM71_023485 PF01850 PIN domain DYM71_023490 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin DYM71_023530 PF00589 Phage integrase family DYM71_023540 PF10609 NUBPL iron-transfer P-loop NTPase DYM71_023545 PF06406 StbA protein DYM71_023555 PF11799 impB/mucB/samB family C-terminal domain DYM71_023555 PF00817 impB/mucB/samB family DYM71_023555 PF13438 Domain of unknown function (DUF4113) DYM71_023560 PF00717 Peptidase S24-like DYM71_023565 PF06183 DinI-like family DYM71_023570 PF06924 Protein of unknown function (DUF1281) DYM71_023580 PF01555 DNA methylase DYM71_023590 PF07128 Protein of unknown function (DUF1380) DYM71_023600 PF07339 Protein of unknown function (DUF1472) DYM71_023605 PF03230 Antirestriction protein DYM71_023610 PF07128 Protein of unknown function (DUF1380) DYM71_023620 PF00436 Single-strand binding protein family DYM71_023625 PF06006 Bacterial protein of unknown function (DUF905) DYM71_023630 PF02195 ParB-like nuclease domain DYM71_023635 PF06290 Plasmid SOS inhibition protein (PsiB) DYM71_023640 PF06952 PsiA protein DYM71_023650 PF07339 Protein of unknown function (DUF1472) DYM71_023670 PF04754 Putative transposase, YhgA-like DYM71_023700 PF03432 Relaxase/Mobilisation nuclease domain DYM71_023700 PF18821 Large polyvalent protein-associated domain 7 DYM71_023725 PF01848 Hok/gef family DYM71_023870 PF00589 Phage integrase family DYM71_023875 PF04917 Bacterial shufflon protein, N-terminal constant region DYM71_023880 PF04917 Bacterial shufflon protein, N-terminal constant region DYM71_023890 PF01464 Transglycosylase SLT domain DYM71_023905 PF00437 Type II/IV secretion system protein DYM71_023920 PF00263 Bacterial type II and III secretion system protein DYM71_023920 PF07655 Secretin N-terminal domain DYM71_023975 PF00892 EamA-like transporter family DYM71_023980 PF07690 Major Facilitator Superfamily DYM71_023985 PF02909 Tetracyclin repressor-like, C-terminal domain DYM71_023985 PF00440 Bacterial regulatory proteins, tetR family DYM71_023995 PF09278 MerR, DNA binding DYM71_023995 PF00376 MerR family regulatory protein DYM71_024000 PF02411 MerT mercuric transport protein DYM71_024005 PF00403 Heavy-metal-associated domain DYM71_024010 PF03203 MerC mercury resistance protein DYM71_024015 PF00403 Heavy-metal-associated domain DYM71_024015 PF07992 Pyridine nucleotide-disulphide oxidoreductase DYM71_024015 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DYM71_024020 PF13411 MerR HTH family regulatory protein DYM71_024025 PF05052 MerE protein DYM71_024030 PF13188 PAS domain DYM71_024030 PF03707 Bacterial signalling protein N terminal repeat DYM71_024030 PF00563 EAL domain DYM71_024030 PF00990 Diguanylate cyclase, GGDEF domain DYM71_024045 PF00665 Integrase core domain DYM71_024050 PF01695 IstB-like ATP binding protein DYM71_024060 PF00809 Pterin binding enzyme DYM71_024065 PF00893 Small Multidrug Resistance protein DYM71_024070 PF13427 Domain of unknown function (DUF4111) DYM71_024070 PF01909 Nucleotidyltransferase domain DYM71_024075 PF13495 Phage integrase, N-terminal SAM-like domain DYM71_024075 PF00589 Phage integrase family DYM71_024080 PF13610 DDE domain DYM71_024115 PF01276 Orn/Lys/Arg decarboxylase, major domain DYM71_024115 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain DYM71_024115 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain DYM71_024120 PF03595 Voltage-dependent anion channel DYM71_024125 PF13520 Amino acid permease DYM71_024135 PF04754 Putative transposase, YhgA-like DYM71_024140 PF13358 DDE superfamily endonuclease DYM71_024145 PF04076 Bacterial OB fold (BOF) protein DYM71_024150 PF07690 Major Facilitator Superfamily DYM71_024200 PF02899 Phage integrase, N-terminal SAM-like domain DYM71_024200 PF00589 Phage integrase family DYM71_024215 PF00561 alpha/beta hydrolase fold DYM71_024230 PF00425 chorismate binding enzyme DYM71_024235 PF07690 Major Facilitator Superfamily DYM71_024240 PF00005 ABC transporter DYM71_024240 PF00664 ABC transporter transmembrane region DYM71_024245 PF04954 Siderophore-interacting protein DYM71_024245 PF08021 Siderophore-interacting FAD-binding domain DYM71_024245 PF00005 ABC transporter DYM71_024245 PF00664 ABC transporter transmembrane region DYM71_024255 PF08242 Methyltransferase domain DYM71_024255 PF00501 AMP-binding enzyme DYM71_024255 PF00668 Condensation domain DYM71_024255 PF00550 Phosphopantetheine attachment site DYM71_024260 PF00698 Acyl transferase domain DYM71_024260 PF00550 Phosphopantetheine attachment site DYM71_024260 PF00668 Condensation domain DYM71_024260 PF16197 Ketoacyl-synthetase C-terminal extension DYM71_024260 PF00109 Beta-ketoacyl synthase, N-terminal domain DYM71_024260 PF02801 Beta-ketoacyl synthase, C-terminal domain DYM71_024270 PF00975 Thioesterase domain DYM71_024275 PF13193 AMP-binding enzyme C-terminal domain DYM71_024275 PF00501 AMP-binding enzyme