locus-tag class description INQ46_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain INQ46_00010 PF02767 DNA polymerase III beta subunit, central domain INQ46_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain INQ46_00015 PF02463 RecF/RecN/SMC N terminal domain INQ46_00020 PF01751 Toprim domain INQ46_00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase INQ46_00020 PF18053 DNA gyrase B subunit insert domain INQ46_00020 PF00986 DNA gyrase B subunit, carboxyl terminus INQ46_00020 PF00204 DNA gyrase B INQ46_00025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ46_00025 PF03466 LysR substrate binding domain INQ46_00030 PF13378 Enolase C-terminal domain-like INQ46_00030 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain INQ46_00035 PF07690 Major Facilitator Superfamily INQ46_00045 PF00392 Bacterial regulatory proteins, gntR family INQ46_00045 PF07729 FCD domain INQ46_00050 PF05035 2-keto-3-deoxy-galactonokinase INQ46_00055 PF01081 KDPG and KHG aldolase INQ46_00060 PF13378 Enolase C-terminal domain-like INQ46_00060 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain INQ46_00065 PF07690 Major Facilitator Superfamily INQ46_00070 PF00512 His Kinase A (phospho-acceptor) domain INQ46_00070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase INQ46_00070 PF01627 Hpt domain INQ46_00070 PF00672 HAMP domain INQ46_00070 PF00072 Response regulator receiver domain INQ46_00075 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family INQ46_00080 PF00072 Response regulator receiver domain INQ46_00080 PF00486 Transcriptional regulatory protein, C terminal INQ46_00085 PF03264 NapC/NirT cytochrome c family, N-terminal region INQ46_00090 PF18364 Molybdopterin oxidoreductase N-terminal domain INQ46_00090 PF00384 Molybdopterin oxidoreductase INQ46_00090 PF01568 Molydopterin dinucleotide binding domain INQ46_00095 PF02613 Nitrate reductase delta subunit INQ46_00100 PF14376 Haem-binding domain INQ46_00100 PF00034 Cytochrome c INQ46_00100 PF03150 Di-haem cytochrome c peroxidase INQ46_00105 PF00005 ABC transporter INQ46_00110 PF03379 CcmB protein INQ46_00115 PF01578 Cytochrome C assembly protein INQ46_00120 PF04995 Heme exporter protein D (CcmD) INQ46_00125 PF03100 CcmE INQ46_00130 PF01578 Cytochrome C assembly protein INQ46_00130 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal INQ46_00135 PF08534 Redoxin INQ46_00140 PF03918 Cytochrome C biogenesis protein INQ46_00145 PF12566 Protein of unknown function (DUF3748) INQ46_00145 PF07676 WD40-like Beta Propeller Repeat INQ46_00150 PF07119 Protein of unknown function (DUF1375) INQ46_00155 PF00011 Hsp20/alpha crystallin family INQ46_00160 PF00011 Hsp20/alpha crystallin family INQ46_00170 PF02080 TrkA-C domain INQ46_00170 PF06826 Predicted Permease Membrane Region INQ46_00180 PF02656 Domain of unknown function (DUF202) INQ46_00185 PF02656 Domain of unknown function (DUF202) INQ46_00195 PF00291 Pyridoxal-phosphate dependent enzyme INQ46_00200 PF02447 GntP family permease INQ46_00205 PF03466 LysR substrate binding domain INQ46_00205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ46_00215 PF07690 Major Facilitator Superfamily INQ46_00225 PF13939 Toxin TisB, type I toxin-antitoxin system INQ46_00235 PF08049 IlvB leader peptide INQ46_00240 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain INQ46_00240 PF00205 Thiamine pyrophosphate enzyme, central domain INQ46_00240 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain INQ46_00245 PF01842 ACT domain INQ46_00250 PF08220 DeoR-like helix-turn-helix domain INQ46_00250 PF00455 DeoR C terminal sensor domain INQ46_00255 PF00294 pfkB family carbohydrate kinase INQ46_00260 PF07690 Major Facilitator Superfamily INQ46_00270 PF00072 Response regulator receiver domain INQ46_00270 PF00196 Bacterial regulatory proteins, luxR family INQ46_00275 PF05231 MASE1 INQ46_00275 PF07730 Histidine kinase INQ46_00275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase INQ46_00280 PF07690 Major Facilitator Superfamily INQ46_00285 PF07690 Major Facilitator Superfamily INQ46_00290 PF06711 Protein of unknown function (DUF1198) INQ46_00295 PF00392 Bacterial regulatory proteins, gntR family INQ46_00295 PF07702 UTRA domain INQ46_00305 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit INQ46_00315 PF01527 Transposase INQ46_00320 PF00665 Integrase core domain INQ46_00320 PF13276 HTH-like domain INQ46_00320 PF13333 Integrase core domain INQ46_00345 PF07690 Major Facilitator Superfamily INQ46_00350 PF00232 Glycosyl hydrolase family 1 INQ46_00360 PF00874 PRD domain INQ46_00360 PF00158 Sigma-54 interaction domain INQ46_00370 PF03610 PTS system fructose IIA component INQ46_00370 PF03830 PTS system sorbose subfamily IIB component INQ46_00375 PF03609 PTS system sorbose-specific iic component INQ46_00380 PF03613 PTS system mannose/fructose/sorbose family IID component INQ46_00385 PF03841 L-seryl-tRNA selenium transferase INQ46_00390 PF07071 KDGP aldolase INQ46_00400 PF00892 EamA-like transporter family INQ46_00405 PF02308 MgtC family INQ46_00410 PF00690 Cation transporter/ATPase, N-terminus INQ46_00410 PF00689 Cation transporting ATPase, C-terminus INQ46_00425 PF00857 Isochorismatase family INQ46_00445 PF01055 Glycosyl hydrolases family 31 INQ46_00445 PF13802 Galactose mutarotase-like INQ46_00450 PF05170 AsmA family INQ46_00455 PF00860 Permease family INQ46_00460 PF03616 Sodium/glutamate symporter INQ46_00465 PF17191 RecG wedge domain INQ46_00465 PF00271 Helicase conserved C-terminal domain INQ46_00465 PF00270 DEAD/DEAH box helicase INQ46_00470 PF12105 SpoU, rRNA methylase, C-terminal INQ46_00470 PF00588 SpoU rRNA Methylase family INQ46_00475 PF04607 Region found in RelA / SpoT proteins INQ46_00475 PF13291 ACT domain INQ46_00475 PF02824 TGS domain INQ46_00480 PF01192 RNA polymerase Rpb6 INQ46_00485 PF00625 Guanylate kinase INQ46_00490 PF01653 NAD-dependent DNA ligase adenylation domain INQ46_00490 PF03120 NAD-dependent DNA ligase OB-fold domain INQ46_00495 PF03458 UPF0126 domain INQ46_00505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ46_00505 PF03466 LysR substrate binding domain INQ46_00510 PF08340 Domain of unknown function (DUF1732) INQ46_00510 PF03755 YicC-like family, N-terminal region INQ46_00515 PF03725 3' exoribonuclease family, domain 2 INQ46_00515 PF01138 3' exoribonuclease family, domain 1 INQ46_00520 PF00156 Phosphoribosyl transferase domain INQ46_00525 PF00440 Bacterial regulatory proteins, tetR family INQ46_00530 PF00692 dUTPase INQ46_00535 PF02441 Flavoprotein INQ46_00535 PF04127 DNA / pantothenate metabolism flavoprotein INQ46_00540 PF04002 RadC-like JAB domain INQ46_00545 PF00830 Ribosomal L28 family INQ46_00550 PF00471 Ribosomal protein L33 INQ46_00555 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain INQ46_00555 PF06827 Zinc finger found in FPG and IleRS INQ46_00555 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain INQ46_00560 PF01467 Cytidylyltransferase-like INQ46_00565 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) INQ46_00570 PF01075 Glycosyltransferase family 9 (heptosyltransferase) INQ46_00575 PF13439 Glycosyltransferase Family 4 INQ46_00575 PF00534 Glycosyl transferases group 1 INQ46_00595 PF00534 Glycosyl transferases group 1 INQ46_00595 PF13439 Glycosyltransferase Family 4 INQ46_00600 PF08437 Glycosyl transferase family 8 C-terminal INQ46_00600 PF01501 Glycosyl transferase family 8 INQ46_00605 PF01501 Glycosyl transferase family 8 INQ46_00605 PF08437 Glycosyl transferase family 8 C-terminal INQ46_00610 PF06176 Lipopolysaccharide core biosynthesis protein (WaaY) INQ46_00620 PF00534 Glycosyl transferases group 1 INQ46_00625 PF04932 O-Antigen ligase INQ46_00630 PF01075 Glycosyltransferase family 9 (heptosyltransferase) INQ46_00635 PF01075 Glycosyltransferase family 9 (heptosyltransferase) INQ46_00640 PF01370 NAD dependent epimerase/dehydratase family INQ46_00645 PF00155 Aminotransferase class I and II INQ46_00650 PF08240 Alcohol dehydrogenase GroES-like domain INQ46_00650 PF00107 Zinc-binding dehydrogenase INQ46_00655 PF00535 Glycosyl transferase family 2 INQ46_00660 PF04748 Divergent polysaccharide deacetylase INQ46_00665 PF01551 Peptidase family M23 INQ46_00670 PF01676 Metalloenzyme superfamily INQ46_00670 PF06415 BPG-independent PGAM N-terminus (iPGM_N) INQ46_00675 PF00581 Rhodanese-like domain INQ46_00680 PF00462 Glutaredoxin INQ46_00685 PF02556 Preprotein translocase subunit SecB INQ46_00690 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus INQ46_00690 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus INQ46_00695 PF06426 Serine acetyltransferase, N-terminal INQ46_00695 PF00132 Bacterial transferase hexapeptide (six repeats) INQ46_00700 PF00588 SpoU rRNA Methylase family INQ46_00705 PF01070 FMN-dependent dehydrogenase INQ46_00710 PF00392 Bacterial regulatory proteins, gntR family INQ46_00710 PF07729 FCD domain INQ46_00715 PF02652 L-lactate permease INQ46_00720 PF03895 YadA-like membrane anchor domain INQ46_00720 PF13018 Extended Signal Peptide of Type V secretion system INQ46_00720 PF05658 Head domain of trimeric autotransporter adhesin INQ46_00720 PF05662 Coiled stalk of trimeric autotransporter adhesin INQ46_00725 PF11622 Protein of unknown function (DUF3251) INQ46_00730 PF10928 Protein of unknown function (DUF2810) INQ46_00740 PF05068 Mannitol repressor INQ46_00745 PF01232 Mannitol dehydrogenase Rossmann domain INQ46_00745 PF08125 Mannitol dehydrogenase C-terminal domain INQ46_00750 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 INQ46_00750 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit INQ46_00750 PF02378 Phosphotransferase system, EIIC INQ46_00755 PF13417 Glutathione S-transferase, N-terminal domain INQ46_00755 PF00043 Glutathione S-transferase, C-terminal domain INQ46_00760 PF03841 L-seryl-tRNA selenium transferase INQ46_00760 PF12390 Selenocysteine synthase N terminal INQ46_00765 PF09107 Elongation factor SelB, winged helix INQ46_00765 PF09106 Elongation factor SelB, winged helix INQ46_00765 PF03144 Elongation factor Tu domain 2 INQ46_00765 PF00009 Elongation factor Tu GTP binding domain INQ46_00770 PF00480 ROK family INQ46_00775 PF00171 Aldehyde dehydrogenase family INQ46_00780 PF07944 Beta-L-arabinofuranosidase, GH127 INQ46_00795 PF00596 Class II Aldolase and Adducin N-terminal domain INQ46_00800 PF01261 Xylose isomerase-like TIM barrel INQ46_00805 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family INQ46_00810 PF02782 FGGY family of carbohydrate kinases, C-terminal domain INQ46_00810 PF00370 FGGY family of carbohydrate kinases, N-terminal domain INQ46_00815 PF03480 Bacterial extracellular solute-binding protein, family 7 INQ46_00820 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component INQ46_00825 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component INQ46_00830 PF16154 Domain of unknown function (DUF4862) INQ46_00835 PF04074 YhcH/YjgK/YiaL INQ46_00840 PF02615 Malate/L-lactate dehydrogenase INQ46_00845 PF01614 Bacterial transcriptional regulator INQ46_00845 PF09339 IclR helix-turn-helix domain INQ46_00850 PF13247 4Fe-4S dicluster domain INQ46_00855 PF00155 Aminotransferase class I and II INQ46_00860 PF00128 Alpha amylase, catalytic domain INQ46_00865 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase INQ46_00870 PF12833 Helix-turn-helix domain INQ46_00880 PF02782 FGGY family of carbohydrate kinases, C-terminal domain INQ46_00880 PF00370 FGGY family of carbohydrate kinases, N-terminal domain INQ46_00885 PF05360 yiaA/B two helix domain INQ46_00890 PF01757 Acyltransferase family INQ46_00895 PF13983 YsaB-like lipoprotein INQ46_00900 PF02091 Glycyl-tRNA synthetase alpha subunit INQ46_00905 PF05746 DALR anticodon binding domain INQ46_00905 PF02092 Glycyl-tRNA synthetase beta subunit INQ46_00910 PF13276 HTH-like domain INQ46_00910 PF00665 Integrase core domain INQ46_00910 PF13333 Integrase core domain INQ46_00915 PF02463 RecF/RecN/SMC N terminal domain INQ46_00940 PF00313 'Cold-shock' DNA-binding domain INQ46_00945 PF01381 Helix-turn-helix INQ46_00950 PF11254 Protein of unknown function (DUF3053) INQ46_00955 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain INQ46_00955 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain INQ46_00960 PF00691 OmpA family INQ46_00960 PF13488 Glycine zipper INQ46_00965 PF01568 Molydopterin dinucleotide binding domain INQ46_00965 PF18364 Molybdopterin oxidoreductase N-terminal domain INQ46_00965 PF00384 Molybdopterin oxidoreductase INQ46_00970 PF00583 Acetyltransferase (GNAT) family INQ46_00975 PF03352 Methyladenine glycosylase INQ46_00980 PF03797 Autotransporter beta-domain INQ46_00985 PF00884 Sulfatase INQ46_00985 PF08019 Phosphoethanolamine transferase EptA/EptB INQ46_01005 PF00356 Bacterial regulatory proteins, lacI family INQ46_01015 PF00860 Permease family INQ46_01020 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle INQ46_01025 PF00528 Binding-protein-dependent transport system inner membrane component INQ46_01030 PF00528 Binding-protein-dependent transport system inner membrane component INQ46_01030 PF12911 N-terminal TM domain of oligopeptide transport permease C INQ46_01035 PF08352 Oligopeptide/dipeptide transporter, C-terminal region INQ46_01035 PF00005 ABC transporter INQ46_01040 PF00005 ABC transporter INQ46_01040 PF08352 Oligopeptide/dipeptide transporter, C-terminal region INQ46_01045 PF03222 Tryptophan/tyrosine permease family INQ46_01055 PF13940 Toxin Ldr, type I toxin-antitoxin system INQ46_01060 PF11658 Cellulose biosynthesis protein BcsG INQ46_01065 PF11120 Cellulose biosynthesis protein BcsF INQ46_01070 PF10995 Cellulose biosynthesis GIL INQ46_01075 PF10945 Cellulose biosynthesis protein BcsR INQ46_01080 PF06564 Cellulose biosynthesis protein BcsQ INQ46_01085 PF03552 Cellulose synthase INQ46_01085 PF00535 Glycosyl transferase family 2 INQ46_01085 PF07238 PilZ domain INQ46_01090 PF03170 Bacterial cellulose synthase subunit INQ46_01095 PF01270 Glycosyl hydrolases family 8 INQ46_01100 PF13176 Tetratricopeptide repeat INQ46_01100 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) INQ46_01105 PF17154 Gammaproteobacterial periplasmic sensor domain INQ46_01105 PF00990 Diguanylate cyclase, GGDEF domain INQ46_01105 PF00563 EAL domain INQ46_01105 PF00672 HAMP domain INQ46_01110 PF00375 Sodium:dicarboxylate symporter family INQ46_01115 PF05193 Peptidase M16 inactive domain INQ46_01115 PF00675 Insulinase (Peptidase family M16) INQ46_01120 PF00294 pfkB family carbohydrate kinase INQ46_01125 PF00563 EAL domain INQ46_01130 PF05170 AsmA family INQ46_01135 PF00083 Sugar (and other) transporter INQ46_01135 PF07690 Major Facilitator Superfamily INQ46_01140 PF03631 Virulence factor BrkB INQ46_01145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ46_01145 PF03466 LysR substrate binding domain INQ46_01150 PF00196 Bacterial regulatory proteins, luxR family INQ46_01165 PF01204 Trehalase INQ46_01170 PF07702 UTRA domain INQ46_01170 PF00392 Bacterial regulatory proteins, gntR family INQ46_01175 PF01380 SIS domain INQ46_01180 PF00294 pfkB family carbohydrate kinase INQ46_01185 PF03605 Anaerobic c4-dicarboxylate membrane transporter INQ46_01190 PF17763 Glutaminase/Asparaginase C-terminal domain INQ46_01190 PF00710 Asparaginase, N-terminal INQ46_01195 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain INQ46_01195 PF07992 Pyridine nucleotide-disulphide oxidoreductase INQ46_01200 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ INQ46_01215 PF01432 Peptidase family M3 INQ46_01220 PF04445 Putative SAM-dependent methyltransferase INQ46_01225 PF00854 POT family INQ46_01230 PF00582 Universal stress protein family INQ46_01235 PF10625 Universal stress protein B (UspB) INQ46_01240 PF01384 Phosphate transporter family INQ46_01255 PF07690 Major Facilitator Superfamily INQ46_01295 PF13533 Biotin-lipoyl like INQ46_01300 PF00005 ABC transporter INQ46_01310 PF01402 Ribbon-helix-helix protein, copG family INQ46_01310 PF08753 NikR C terminal nickel binding domain INQ46_01315 PF01648 4'-phosphopantetheinyl transferase superfamily INQ46_01320 PF01594 AI-2E family transporter INQ46_01330 PF08786 DcrB INQ46_01335 PF02592 Putative vitamin uptake transporter INQ46_01340 PF01206 Sulfurtransferase TusA INQ46_01345 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain INQ46_01345 PF00672 HAMP domain INQ46_01345 PF02203 Tar ligand binding domain homologue INQ46_01350 PF00403 Heavy-metal-associated domain INQ46_01355 PF07947 YhhN family INQ46_01360 PF10694 Protein of unknown function (DUF2500) INQ46_01365 PF06611 Protein of unknown function (DUF1145) INQ46_01375 PF00448 SRP54-type protein, GTPase domain INQ46_01375 PF02881 SRP54-type protein, helical bundle domain INQ46_01380 PF00005 ABC transporter INQ46_01385 PF18075 FtsX extracellular domain INQ46_01385 PF02687 FtsX-like permease family INQ46_01390 PF04542 Sigma-70 region 2 INQ46_01390 PF04545 Sigma-70, region 4 INQ46_01395 PF13458 Periplasmic binding protein INQ46_01405 PF12568 Acetyltransferase (GNAT) domain, PanZ INQ46_01410 PF13458 Periplasmic binding protein INQ46_01415 PF02653 Branched-chain amino acid transport system / permease component INQ46_01420 PF11862 Domain of unknown function (DUF3382) INQ46_01420 PF02653 Branched-chain amino acid transport system / permease component INQ46_01425 PF00005 ABC transporter INQ46_01425 PF12399 Branched-chain amino acid ATP-binding cassette transporter INQ46_01430 PF00005 ABC transporter INQ46_01435 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system INQ46_01445 PF13416 Bacterial extracellular solute-binding protein INQ46_01450 PF00528 Binding-protein-dependent transport system inner membrane component INQ46_01455 PF00528 Binding-protein-dependent transport system inner membrane component INQ46_01460 PF17912 MalK OB fold domain INQ46_01460 PF00005 ABC transporter INQ46_01465 PF03009 Glycerophosphoryl diester phosphodiesterase family INQ46_01470 PF10956 Protein of unknown function (DUF2756) INQ46_01490 PF00583 Acetyltransferase (GNAT) family INQ46_01495 PF02894 Oxidoreductase family, C-terminal alpha/beta domain INQ46_01495 PF01408 Oxidoreductase family, NAD-binding Rossmann fold INQ46_01500 PF17954 Quercetinase C-terminal cupin domain INQ46_01500 PF02678 Pirin INQ46_01505 PF00356 Bacterial regulatory proteins, lacI family INQ46_01505 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family INQ46_01510 PF01202 Shikimate kinase INQ46_01515 PF02447 GntP family permease INQ46_01525 PF02774 Semialdehyde dehydrogenase, dimerisation domain INQ46_01525 PF01118 Semialdehyde dehydrogenase, NAD binding domain INQ46_01530 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) INQ46_01530 PF02806 Alpha amylase, C-terminal all-beta domain INQ46_01530 PF00128 Alpha amylase, catalytic domain INQ46_01535 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) INQ46_01535 PF00128 Alpha amylase, catalytic domain INQ46_01535 PF18390 Glycogen debranching enzyme C-terminal domain INQ46_01540 PF00483 Nucleotidyl transferase INQ46_01545 PF00534 Glycosyl transferases group 1 INQ46_01545 PF08323 Starch synthase catalytic domain INQ46_01550 PF00343 Carbohydrate phosphorylase INQ46_01555 PF16901 C-terminal domain of alpha-glycerophosphate oxidase INQ46_01555 PF01266 FAD dependent oxidoreductase INQ46_01560 PF00581 Rhodanese-like domain INQ46_01565 PF01694 Rhomboid family INQ46_01565 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease INQ46_01570 PF00455 DeoR C terminal sensor domain INQ46_01570 PF08220 DeoR-like helix-turn-helix domain INQ46_01575 PF17874 MalT-like TPR region INQ46_01575 PF00196 Bacterial regulatory proteins, luxR family INQ46_01580 PF00343 Carbohydrate phosphorylase INQ46_01585 PF02446 4-alpha-glucanotransferase INQ46_01590 PF02447 GntP family permease INQ46_01595 PF01106 NifU-like domain INQ46_01595 PF01521 Iron-sulphur cluster biosynthesis INQ46_01600 PF00156 Phosphoribosyl transferase domain INQ46_01605 PF00561 alpha/beta hydrolase fold INQ46_01610 PF04754 Putative transposase, YhgA-like INQ46_01615 PF09012 FeoC like transcriptional regulator INQ46_01620 PF07670 Nucleoside recognition INQ46_01620 PF02421 Ferrous iron transport protein B INQ46_01620 PF17910 FeoB cytosolic helical domain INQ46_01620 PF07664 Ferrous iron transport protein B C terminus INQ46_01625 PF04023 FeoA domain INQ46_01630 PF17674 HHH domain INQ46_01630 PF00575 S1 RNA binding domain INQ46_01630 PF09371 Tex-like protein N-terminal domain INQ46_01630 PF16921 Tex protein YqgF-like domain INQ46_01635 PF01272 Transcription elongation factor, GreA/GreB, C-term INQ46_01635 PF03449 Transcription elongation factor, N-terminal INQ46_01640 PF00072 Response regulator receiver domain INQ46_01640 PF00486 Transcriptional regulatory protein, C terminal INQ46_01645 PF00512 His Kinase A (phospho-acceptor) domain INQ46_01645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase INQ46_01645 PF00672 HAMP domain INQ46_01650 PF01293 Phosphoenolpyruvate carboxykinase INQ46_01655 PF13687 Domain of unknown function (DUF4153) INQ46_01660 PF01430 Hsp33 protein INQ46_01665 PF01479 S4 domain INQ46_01670 PF13419 Haloacid dehalogenase-like hydrolase INQ46_01675 PF07095 Intracellular growth attenuator protein IgaA INQ46_01680 PF00293 NUDIX domain INQ46_01685 PF17092 Penicillin-binding protein OB-like domain INQ46_01685 PF00912 Transglycosylase INQ46_01685 PF00905 Penicillin binding protein transpeptidase domain INQ46_01695 PF05137 Fimbrial assembly protein (PilN) INQ46_01705 PF10748 DNA utilization proteins HofP INQ46_01710 PF00263 Bacterial type II and III secretion system protein INQ46_01710 PF03958 Bacterial type II/III secretion system short domain INQ46_01715 PF01202 Shikimate kinase INQ46_01720 PF01761 3-dehydroquinate synthase INQ46_01725 PF05036 Sporulation related domain INQ46_01730 PF02086 D12 class N6 adenine-specific DNA methyltransferase INQ46_01735 PF00834 Ribulose-phosphate 3 epimerase family INQ46_01740 PF13419 Haloacid dehalogenase-like hydrolase INQ46_01745 PF00579 tRNA synthetases class I (W and Y) INQ46_01750 PF13978 Protein of unknown function (DUF4223) INQ46_01760 PF10414 Sirohaem synthase dimerisation region INQ46_01760 PF14824 Sirohaem biosynthesis protein central INQ46_01760 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases INQ46_01765 PF01226 Formate/nitrite transporter INQ46_01770 PF13806 Rieske-like [2Fe-2S] domain INQ46_01775 PF01077 Nitrite and sulphite reductase 4Fe-4S domain INQ46_01775 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain INQ46_01775 PF07992 Pyridine nucleotide-disulphide oxidoreductase INQ46_01775 PF04324 BFD-like [2Fe-2S] binding domain INQ46_01775 PF18267 Rubredoxin NAD+ reductase C-terminal domain INQ46_01780 PF07690 Major Facilitator Superfamily INQ46_01785 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD INQ46_01790 PF10832 Protein of unknown function (DUF2559) INQ46_01795 PF02661 Fic/DOC family INQ46_01800 PF00117 Glutamine amidotransferase class-I INQ46_01805 PF00202 Aminotransferase class-III INQ46_01810 PF12805 FUSC-like inner membrane protein yccS INQ46_01815 PF00027 Cyclic nucleotide-binding domain INQ46_01815 PF13545 Crp-like helix-turn-helix domain INQ46_01825 PF00485 Phosphoribulokinase / Uridine kinase family INQ46_01830 PF06794 Uncharacterised protein family (UPF0270) INQ46_01835 PF00561 alpha/beta hydrolase fold INQ46_01840 PF08803 Putative mono-oxygenase ydhR INQ46_01850 PF00005 ABC transporter INQ46_01850 PF12848 ABC transporter INQ46_01855 PF02525 Flavodoxin-like fold INQ46_01860 PF00999 Sodium/hydrogen exchanger family INQ46_01860 PF02254 TrkA-N domain INQ46_01865 PF09526 Probable metal-binding protein (DUF2387) INQ46_01870 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase INQ46_01875 PF04102 SlyX INQ46_01880 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase INQ46_01880 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase INQ46_01885 PF13309 HTH domain INQ46_01885 PF08348 YheO-like PAS domain INQ46_01890 PF02635 DsrE/DsrF-like family INQ46_01895 PF02635 DsrE/DsrF-like family INQ46_01900 PF04077 DsrH like protein INQ46_01905 PF00164 Ribosomal protein S12/S23 INQ46_01910 PF00177 Ribosomal protein S7p/S5e INQ46_01915 PF00009 Elongation factor Tu GTP binding domain INQ46_01915 PF14492 Elongation Factor G, domain II INQ46_01915 PF00679 Elongation factor G C-terminus INQ46_01915 PF03764 Elongation factor G, domain IV INQ46_01915 PF03144 Elongation factor Tu domain 2 INQ46_01920 PF03143 Elongation factor Tu C-terminal domain INQ46_01920 PF03144 Elongation factor Tu domain 2 INQ46_01920 PF00009 Elongation factor Tu GTP binding domain INQ46_01925 PF04324 BFD-like [2Fe-2S] binding domain INQ46_01930 PF00210 Ferritin-like domain INQ46_01935 PF01478 Type IV leader peptidase family INQ46_01940 PF00338 Ribosomal protein S10p/S20e INQ46_01945 PF00297 Ribosomal protein L3 INQ46_01950 PF00573 Ribosomal protein L4/L1 family INQ46_01955 PF00276 Ribosomal protein L23 INQ46_01960 PF03947 Ribosomal Proteins L2, C-terminal domain INQ46_01960 PF00181 Ribosomal Proteins L2, RNA binding domain INQ46_01965 PF00203 Ribosomal protein S19 INQ46_01970 PF00237 Ribosomal protein L22p/L17e INQ46_01975 PF00189 Ribosomal protein S3, C-terminal domain INQ46_01975 PF07650 KH domain INQ46_01980 PF00252 Ribosomal protein L16p/L10e INQ46_01985 PF00831 Ribosomal L29 protein INQ46_01990 PF00366 Ribosomal protein S17 INQ46_01995 PF00238 Ribosomal protein L14p/L23e INQ46_02000 PF00467 KOW motif INQ46_02000 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 INQ46_02005 PF00673 ribosomal L5P family C-terminus INQ46_02005 PF00281 Ribosomal protein L5 INQ46_02010 PF00253 Ribosomal protein S14p/S29e INQ46_02015 PF00410 Ribosomal protein S8 INQ46_02020 PF00347 Ribosomal protein L6 INQ46_02025 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast INQ46_02030 PF03719 Ribosomal protein S5, C-terminal domain INQ46_02030 PF00333 Ribosomal protein S5, N-terminal domain INQ46_02035 PF00327 Ribosomal protein L30p/L7e INQ46_02040 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A INQ46_02045 PF00344 SecY translocase INQ46_02050 PF00444 Ribosomal protein L36 INQ46_02055 PF00416 Ribosomal protein S13/S18 INQ46_02060 PF00411 Ribosomal protein S11 INQ46_02065 PF00163 Ribosomal protein S4/S9 N-terminal domain INQ46_02065 PF01479 S4 domain INQ46_02070 PF01000 RNA polymerase Rpb3/RpoA insert domain INQ46_02070 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain INQ46_02070 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain INQ46_02075 PF01196 Ribosomal protein L17 INQ46_02080 PF09350 Domain of unknown function (DUF1992) INQ46_02085 PF13411 MerR HTH family regulatory protein INQ46_02090 PF03889 Alternative ribosome-rescue factor A INQ46_02095 PF01741 Large-conductance mechanosensitive channel, MscL INQ46_02100 PF02080 TrkA-C domain INQ46_02100 PF02254 TrkA-N domain INQ46_02105 PF01029 NusB family INQ46_02105 PF01189 16S rRNA methyltransferase RsmB/F INQ46_02110 PF00551 Formyl transferase INQ46_02110 PF02911 Formyl transferase, C-terminal domain INQ46_02115 PF01327 Polypeptide deformylase INQ46_02120 PF02481 DNA recombination-mediator protein A INQ46_02120 PF17782 DprA winged helix domain INQ46_02125 PF04361 Protein of unknown function (DUF494) INQ46_02130 PF01396 Topoisomerase DNA binding C4 zinc finger INQ46_02135 PF01300 Telomere recombination INQ46_02140 PF01488 Shikimate / quinate 5-dehydrogenase INQ46_02140 PF18317 Shikimate 5'-dehydrogenase C-terminal domain INQ46_02140 PF08501 Shikimate dehydrogenase substrate binding domain INQ46_02145 PF07369 Protein of unknown function (DUF1488) INQ46_02150 PF00132 Bacterial transferase hexapeptide (six repeats) INQ46_02200 PF00753 Metallo-beta-lactamase superfamily INQ46_02200 PF14863 Alkyl sulfatase dimerisation INQ46_02200 PF14864 Alkyl sulfatase C-terminal INQ46_02215 PF06183 DinI-like family INQ46_02220 PF02954 Bacterial regulatory protein, Fis family INQ46_02225 PF01207 Dihydrouridine synthase (Dus) INQ46_02235 PF00474 Sodium:solute symporter family INQ46_02240 PF06196 Protein of unknown function (DUF997) INQ46_02245 PF02785 Biotin carboxylase C-terminal domain INQ46_02245 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain INQ46_02245 PF00289 Biotin carboxylase, N-terminal domain INQ46_02250 PF00364 Biotin-requiring enzyme INQ46_02255 PF01794 Ferric reductase like transmembrane component INQ46_02260 PF00174 Oxidoreductase molybdopterin binding domain INQ46_02265 PF00107 Zinc-binding dehydrogenase INQ46_02265 PF08240 Alcohol dehydrogenase GroES-like domain INQ46_02270 PF17157 Gammaproteobacterial periplasmic sensor domain INQ46_02270 PF00563 EAL domain INQ46_02270 PF00990 Diguanylate cyclase, GGDEF domain INQ46_02280 PF04085 rod shape-determining protein MreC INQ46_02285 PF04093 rod shape-determining protein MreD INQ46_02290 PF02545 Maf-like protein INQ46_02295 PF00575 S1 RNA binding domain INQ46_02295 PF10150 Ribonuclease E/G family INQ46_02300 PF13116 Protein of unknown function INQ46_02300 PF13502 AsmA-like C-terminal region INQ46_02305 PF01523 Putative modulator of DNA gyrase INQ46_02310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ46_02310 PF03466 LysR substrate binding domain INQ46_02315 PF07869 Protein of unknown function (DUF1656) INQ46_02320 PF13533 Biotin-lipoyl like INQ46_02325 PF04632 Fusaric acid resistance protein family INQ46_02330 PF01337 Barstar (barnase inhibitor) INQ46_02335 PF07338 Protein of unknown function (DUF1471) INQ46_02340 PF07338 Protein of unknown function (DUF1471) INQ46_02345 PF01316 Arginine repressor, DNA binding domain INQ46_02345 PF02863 Arginine repressor, C-terminal domain INQ46_02350 PF00056 lactate/malate dehydrogenase, NAD binding domain INQ46_02350 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain INQ46_02355 PF00392 Bacterial regulatory proteins, gntR family INQ46_02355 PF07702 UTRA domain INQ46_02365 PF00939 Sodium:sulfate symporter transmembrane region INQ46_02370 PF05681 Fumarate hydratase (Fumerase) INQ46_02375 PF05683 Fumarase C-terminus INQ46_02380 PF04277 Oxaloacetate decarboxylase, gamma chain INQ46_02385 PF00682 HMGL-like INQ46_02385 PF00364 Biotin-requiring enzyme INQ46_02385 PF02436 Conserved carboxylase domain INQ46_02390 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit INQ46_02395 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase INQ46_02400 PF13180 PDZ domain INQ46_02405 PF00595 PDZ domain INQ46_02405 PF13180 PDZ domain INQ46_02410 PF06295 Protein of unknown function (DUF1043) INQ46_02415 PF03969 AFG1-like ATPase INQ46_02420 PF00572 Ribosomal protein L13 INQ46_02425 PF00380 Ribosomal protein S9/S16 INQ46_02430 PF00043 Glutathione S-transferase, C-terminal domain INQ46_02430 PF02798 Glutathione S-transferase, N-terminal domain INQ46_02435 PF04386 Stringent starvation protein B INQ46_02440 PF07729 FCD domain INQ46_02440 PF00392 Bacterial regulatory proteins, gntR family INQ46_02445 PF00701 Dihydrodipicolinate synthetase family INQ46_02450 PF07690 Major Facilitator Superfamily INQ46_02455 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase INQ46_02460 PF00480 ROK family INQ46_02465 PF04074 YhcH/YjgK/YiaL INQ46_02470 PF07969 Amidohydrolase family INQ46_02475 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin INQ46_02480 PF17761 DUF1016 N-terminal domain INQ46_02480 PF06250 YhcG PDDEXK nuclease domain INQ46_02485 PF07992 Pyridine nucleotide-disulphide oxidoreductase INQ46_02485 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster INQ46_02490 PF01493 GXGXG motif INQ46_02490 PF00310 Glutamine amidotransferases class-II INQ46_02490 PF01645 Conserved region in glutamate synthase INQ46_02490 PF04898 Glutamate synthase central domain INQ46_02495 PF16199 Radical_SAM C-terminal domain INQ46_02495 PF04055 Radical SAM superfamily INQ46_02500 PF00072 Response regulator receiver domain INQ46_02500 PF18415 Histidine kinase receptor ArcB trans-membrane domain INQ46_02500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase INQ46_02500 PF01627 Hpt domain INQ46_02500 PF00989 PAS fold INQ46_02500 PF00512 His Kinase A (phospho-acceptor) domain INQ46_02510 PF00912 Transglycosylase INQ46_02515 PF10707 PhoP regulatory network protein YrbL INQ46_02520 PF00381 PTS HPr component phosphorylation site INQ46_02525 PF03668 P-loop ATPase protein family INQ46_02530 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 INQ46_02535 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein INQ46_02540 PF00309 Sigma-54 factor, Activator interacting domain (AID) INQ46_02540 PF04963 Sigma-54 factor, core binding domain INQ46_02540 PF04552 Sigma-54, DNA binding domain INQ46_02545 PF12399 Branched-chain amino acid ATP-binding cassette transporter INQ46_02545 PF00005 ABC transporter INQ46_02550 PF03968 OstA-like protein INQ46_02555 PF06835 Lipopolysaccharide-assembly, LptC-related INQ46_02565 PF00571 CBS domain INQ46_02565 PF01380 SIS domain INQ46_02570 PF01699 Sodium/calcium exchanger protein INQ46_02575 PF00005 ABC transporter INQ46_02580 PF02405 Permease MlaE INQ46_02585 PF02470 MlaD protein INQ46_02590 PF05494 MlaC protein INQ46_02595 PF13466 STAS domain INQ46_02600 PF01722 BolA-like protein INQ46_02605 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) INQ46_02610 PF13693 Winged helix-turn-helix DNA-binding INQ46_02615 PF00348 Polyprenyl synthetase INQ46_02620 PF00829 Ribosomal prokaryotic L21 protein INQ46_02625 PF01016 Ribosomal L27 protein INQ46_02630 PF00892 EamA-like transporter family INQ46_02635 PF01018 GTP1/OBG INQ46_02635 PF01926 50S ribosome-binding GTPase INQ46_02640 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family INQ46_02645 PF01272 Transcription elongation factor, GreA/GreB, C-term INQ46_02645 PF03449 Transcription elongation factor, N-terminal INQ46_02650 PF01985 CRS1 / YhbY (CRM) domain INQ46_02655 PF01728 FtsJ-like methyltransferase INQ46_02660 PF00004 ATPase family associated with various cellular activities (AAA) INQ46_02660 PF17862 AAA+ lid domain INQ46_02660 PF01434 Peptidase family M41 INQ46_02660 PF06480 FtsH Extracellular INQ46_02665 PF00809 Pterin binding enzyme INQ46_02670 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain INQ46_02670 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I INQ46_02670 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II INQ46_02670 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III INQ46_02675 PF03840 Preprotein translocase SecG subunit INQ46_02690 PF00764 Arginosuccinate synthase INQ46_02700 PF17384 RimP C-terminal SH3 domain INQ46_02700 PF02576 RimP N-terminal domain INQ46_02705 PF13184 NusA-like KH domain INQ46_02705 PF08529 NusA N-terminal domain INQ46_02710 PF11987 Translation-initiation factor 2 INQ46_02710 PF00009 Elongation factor Tu GTP binding domain INQ46_02710 PF08364 Bacterial translation initiation factor IF-2 associated region INQ46_02710 PF04760 Translation initiation factor IF-2, N-terminal region INQ46_02715 PF02033 Ribosome-binding factor A INQ46_02720 PF09157 Pseudouridine synthase II TruB, C-terminal INQ46_02720 PF16198 tRNA pseudouridylate synthase B C-terminal domain INQ46_02720 PF01509 TruB family pseudouridylate synthase (N terminal domain) INQ46_02725 PF00312 Ribosomal protein S15 INQ46_02730 PF03725 3' exoribonuclease family, domain 2 INQ46_02730 PF00013 KH domain INQ46_02730 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain INQ46_02730 PF00575 S1 RNA binding domain INQ46_02730 PF01138 3' exoribonuclease family, domain 1 INQ46_02735 PF07719 Tetratricopeptide repeat INQ46_02735 PF13181 Tetratricopeptide repeat INQ46_02745 PF00271 Helicase conserved C-terminal domain INQ46_02745 PF00270 DEAD/DEAH box helicase INQ46_02745 PF12343 Cold shock protein DEAD box A INQ46_02745 PF03880 DbpA RNA binding domain INQ46_02750 PF03222 Tryptophan/tyrosine permease family INQ46_02755 PF00296 Luciferase-like monooxygenase INQ46_02760 PF01136 Peptidase family U32 INQ46_02765 PF01136 Peptidase family U32 INQ46_02770 PF02036 SCP-2 sterol transfer family INQ46_02775 PF13508 Acetyltransferase (GNAT) domain INQ46_02780 PF01541 GIY-YIG catalytic domain INQ46_02790 PF01965 DJ-1/PfpI family INQ46_02795 PF13460 NAD(P)H-binding INQ46_02800 PF04972 BON domain INQ46_02805 PF13580 SIS domain INQ46_02810 PF02021 Uncharacterised protein family UPF0102 INQ46_02815 PF04348 LppC putative lipoprotein INQ46_02820 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases INQ46_02825 PF08220 DeoR-like helix-turn-helix domain INQ46_02830 PF08240 Alcohol dehydrogenase GroES-like domain INQ46_02830 PF00107 Zinc-binding dehydrogenase INQ46_02835 PF03611 PTS system sugar-specific permease component INQ46_02840 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit INQ46_02845 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 INQ46_02850 PF08013 Tagatose 6 phosphate kinase INQ46_02855 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 INQ46_02855 PF00381 PTS HPr component phosphorylation site INQ46_02860 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 INQ46_02860 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit INQ46_02865 PF00294 pfkB family carbohydrate kinase INQ46_02870 PF01116 Fructose-bisphosphate aldolase class-II INQ46_02875 PF08220 DeoR-like helix-turn-helix domain INQ46_02875 PF00455 DeoR C terminal sensor domain INQ46_02880 PF00294 pfkB family carbohydrate kinase INQ46_02885 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus INQ46_02885 PF08666 SAF domain INQ46_02890 PF03328 HpcH/HpaI aldolase/citrate lyase family INQ46_02895 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase INQ46_02895 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase INQ46_02900 PF02595 Glycerate kinase family INQ46_02910 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ46_02910 PF03466 LysR substrate binding domain INQ46_02915 PF00291 Pyridoxal-phosphate dependent enzyme INQ46_02920 PF03222 Tryptophan/tyrosine permease family INQ46_02925 PF00871 Acetokinase family INQ46_02930 PF02901 Pyruvate formate lyase-like INQ46_02930 PF01228 Glycine radical INQ46_02935 PF03313 Serine dehydratase alpha chain INQ46_02935 PF03315 Serine dehydratase beta chain INQ46_02945 PF03313 Serine dehydratase alpha chain INQ46_02955 PF02678 Pirin INQ46_02955 PF17954 Quercetinase C-terminal cupin domain INQ46_02960 PF03466 LysR substrate binding domain INQ46_02960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ46_02965 PF05656 Protein of unknown function (DUF805) INQ46_02970 PF13409 Glutathione S-transferase, N-terminal domain INQ46_02975 PF07681 DoxX INQ46_02980 PF13997 YqjK-like protein INQ46_02985 PF07332 Putative Actinobacterial Holin-X, holin superfamily III INQ46_02990 PF05957 Bacterial protein of unknown function (DUF883) INQ46_02995 PF06476 Protein of unknown function (DUF1090) INQ46_03000 PF13721 SecD export protein N-terminal TM region INQ46_03005 PF09335 SNARE associated Golgi protein INQ46_03010 PF00375 Sodium:dicarboxylate symporter family INQ46_03015 PF03741 Integral membrane protein TerC family INQ46_03020 PF01408 Oxidoreductase family, NAD-binding Rossmann fold INQ46_03025 PF02698 DUF218 domain INQ46_03030 PF01863 Protein of unknown function DUF45 INQ46_03035 PF05175 Methyltransferase small domain INQ46_03040 PF00724 NADH:flavin oxidoreductase / NADH oxidase family INQ46_03040 PF07992 Pyridine nucleotide-disulphide oxidoreductase INQ46_03045 PF00202 Aminotransferase class-III INQ46_03050 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain INQ46_03050 PF08447 PAS fold INQ46_03055 PF02203 Tar ligand binding domain homologue INQ46_03055 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain INQ46_03055 PF00672 HAMP domain INQ46_03060 PF03551 Transcriptional regulator PadR-like family INQ46_03065 PF04954 Siderophore-interacting protein INQ46_03065 PF08021 Siderophore-interacting FAD-binding domain INQ46_03075 PF03167 Uracil DNA glycosylase superfamily INQ46_03080 PF04546 Sigma-70, non-essential region INQ46_03080 PF03979 Sigma-70 factor, region 1.1 INQ46_03080 PF00140 Sigma-70 factor, region 1.2 INQ46_03080 PF04539 Sigma-70 region 3 INQ46_03080 PF04542 Sigma-70 region 2 INQ46_03080 PF04545 Sigma-70, region 4 INQ46_03085 PF10410 DnaB-helicase binding domain of primase INQ46_03085 PF08278 DNA primase DnaG DnaB-binding INQ46_03085 PF01807 CHC2 zinc finger INQ46_03085 PF08275 DNA primase catalytic core, N-terminal domain INQ46_03090 PF01165 Ribosomal protein S21 INQ46_03095 PF00814 Glycoprotease family INQ46_03105 PF02660 Glycerol-3-phosphate acyltransferase INQ46_03110 PF02152 Dihydroneopterin aldolase INQ46_03115 PF02673 Bacitracin resistance protein BacA INQ46_03120 PF01743 Poly A polymerase head domain INQ46_03120 PF01966 HD domain INQ46_03120 PF12627 Probable RNA and SrmB- binding site of polymerase A INQ46_03125 PF08239 Bacterial SH3 domain INQ46_03130 PF01928 CYTH domain INQ46_03135 PF08335 GlnD PII-uridylyltransferase INQ46_03135 PF03710 Glutamate-ammonia ligase adenylyltransferase INQ46_03140 PF01467 Cytidylyltransferase-like INQ46_03140 PF00294 pfkB family carbohydrate kinase INQ46_03150 PF15975 Flotillin INQ46_03150 PF01145 SPFH domain / Band 7 family INQ46_03155 PF07290 Protein of unknown function (DUF1449) INQ46_03160 PF08971 Glycogen synthesis protein INQ46_03165 PF04380 Membrane fusogenic activity INQ46_03170 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase INQ46_03175 PF02600 Disulfide bond formation protein DsbB INQ46_03180 PF01323 DSBA-like thioredoxin domain INQ46_03185 PF05935 Arylsulfotransferase (ASST) INQ46_03185 PF17425 Arylsulfotransferase Ig-like domain INQ46_03190 PF02535 ZIP Zinc transporter INQ46_03195 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase INQ46_03200 PF03738 Glutathionylspermidine synthase preATP-grasp INQ46_03205 PF06693 Protein of unknown function (DUF1190) INQ46_03210 PF02321 Outer membrane efflux protein INQ46_03215 PF00293 NUDIX domain INQ46_03220 PF06853 Protein of unknown function (DUF1249) INQ46_03225 PF00149 Calcineurin-like phosphoesterase INQ46_03230 PF05728 Uncharacterised protein family (UPF0227) INQ46_03235 PF00204 DNA gyrase B INQ46_03235 PF00986 DNA gyrase B subunit, carboxyl terminus INQ46_03235 PF01751 Toprim domain INQ46_03235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase INQ46_03240 PF03992 Antibiotic biosynthesis monooxygenase INQ46_03245 PF02525 Flavodoxin-like fold INQ46_03250 PF08521 Two-component sensor kinase N-terminal INQ46_03250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase INQ46_03250 PF00512 His Kinase A (phospho-acceptor) domain INQ46_03255 PF00072 Response regulator receiver domain INQ46_03255 PF00486 Transcriptional regulatory protein, C terminal INQ46_03260 PF04076 Bacterial OB fold (BOF) protein INQ46_03265 PF06445 GyrI-like small molecule binding domain INQ46_03270 PF03989 DNA gyrase C-terminal domain, beta-propeller INQ46_03270 PF00521 DNA gyrase/topoisomerase IV, subunit A INQ46_03275 PF01553 Acyltransferase INQ46_03280 PF07732 Multicopper oxidase INQ46_03280 PF00394 Multicopper oxidase INQ46_03280 PF07731 Multicopper oxidase INQ46_03310 PF08497 Radical SAM N-terminal INQ46_03310 PF04055 Radical SAM superfamily INQ46_03310 PF11842 Domain of unknown function (DUF3362) INQ46_03320 PF00939 Sodium:sulfate symporter transmembrane region INQ46_03325 PF00248 Aldo/keto reductase family INQ46_03330 PF00465 Iron-containing alcohol dehydrogenase INQ46_03335 PF12833 Helix-turn-helix domain INQ46_03335 PF06719 AraC-type transcriptional regulator N-terminus INQ46_03340 PF09335 SNARE associated Golgi protein INQ46_03345 PF01053 Cys/Met metabolism PLP-dependent enzyme INQ46_03350 PF01618 MotA/TolQ/ExbB proton channel family INQ46_03355 PF02472 Biopolymer transport protein ExbD/TolR INQ46_03380 PF03350 Uncharacterized protein family, UPF0114 INQ46_03385 PF02203 Tar ligand binding domain homologue INQ46_03385 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain INQ46_03385 PF00672 HAMP domain INQ46_03390 PF11115 Protein of unknown function (DUF2623) INQ46_03395 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal INQ46_03395 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit INQ46_03400 PF13247 4Fe-4S dicluster domain INQ46_03405 PF03916 Polysulphide reductase, NrfD INQ46_03410 PF00374 Nickel-dependent hydrogenase INQ46_03415 PF01750 Hydrogenase maturation protease INQ46_03420 PF11939 [NiFe]-hydrogenase assembly, chaperone, HybE INQ46_03425 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA INQ46_03430 PF01455 HupF/HypC family INQ46_03435 PF01497 Periplasmic binding protein INQ46_03445 PF02798 Glutathione S-transferase, N-terminal domain INQ46_03450 PF05257 CHAP domain INQ46_03450 PF03738 Glutathionylspermidine synthase preATP-grasp INQ46_03460 PF02614 Glucuronate isomerase INQ46_03465 PF01232 Mannitol dehydrogenase Rossmann domain INQ46_03465 PF08125 Mannitol dehydrogenase C-terminal domain INQ46_03470 PF03786 D-mannonate dehydratase (UxuA) INQ46_03475 PF07690 Major Facilitator Superfamily INQ46_03485 PF01522 Polysaccharide deacetylase INQ46_03495 PF04965 Gene 25-like lysozyme INQ46_03500 PF00171 Aldehyde dehydrogenase family INQ46_03505 PF01266 FAD dependent oxidoreductase INQ46_03515 PF13520 Amino acid permease INQ46_03525 PF00196 Bacterial regulatory proteins, luxR family INQ46_03530 PF04055 Radical SAM superfamily INQ46_03535 PF00884 Sulfatase INQ46_03540 PF03466 LysR substrate binding domain INQ46_03540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ46_03545 PF03328 HpcH/HpaI aldolase/citrate lyase family INQ46_03550 PF01575 MaoC like domain INQ46_03560 PF05662 Coiled stalk of trimeric autotransporter adhesin INQ46_03560 PF05658 Head domain of trimeric autotransporter adhesin INQ46_03560 PF13018 Extended Signal Peptide of Type V secretion system INQ46_03560 PF03895 YadA-like membrane anchor domain INQ46_03565 PF04355 SmpA / OmlA family INQ46_03565 PF00691 OmpA family INQ46_03580 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain INQ46_03580 PF00672 HAMP domain INQ46_03580 PF02203 Tar ligand binding domain homologue INQ46_03585 PF01738 Dienelactone hydrolase family INQ46_03605 PF00589 Phage integrase family INQ46_03605 PF02899 Phage integrase, N-terminal SAM-like domain INQ46_03615 PF04474 Protein of unknown function (DUF554) INQ46_03620 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain INQ46_03620 PF01276 Orn/Lys/Arg decarboxylase, major domain INQ46_03620 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain INQ46_03625 PF03825 Nucleoside H+ symporter INQ46_03630 PF01464 Transglycosylase SLT domain INQ46_03630 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain INQ46_03635 PF04362 Bacterial Fe(2+) trafficking INQ46_03640 PF14815 NUDIX domain INQ46_03640 PF00633 Helix-hairpin-helix motif INQ46_03640 PF00730 HhH-GPD superfamily base excision DNA repair protein INQ46_03645 PF02390 Putative methyltransferase INQ46_03650 PF04320 Protein with unknown function (DUF469) INQ46_03655 PF11101 Protein of unknown function (DUF2884) INQ46_03660 PF17763 Glutaminase/Asparaginase C-terminal domain INQ46_03660 PF00710 Asparaginase, N-terminal INQ46_03665 PF06717 Protein of unknown function (DUF1202) INQ46_03670 PF06969 HemN C-terminal domain INQ46_03670 PF04055 Radical SAM superfamily INQ46_03675 PF01725 Ham1 family INQ46_03680 PF02594 Uncharacterised ACR, YggU family COG1872 INQ46_03685 PF02325 YGGT family INQ46_03690 PF01168 Alanine racemase, N-terminal domain INQ46_03695 PF00437 Type II/IV secretion system protein INQ46_03705 PF03652 Holliday junction resolvase INQ46_03710 PF02622 Uncharacterized ACR, COG1678 INQ46_03715 PF02951 Prokaryotic glutathione synthetase, N-terminal domain INQ46_03715 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain INQ46_03720 PF04452 RNA methyltransferase INQ46_03725 PF04231 Endonuclease I INQ46_03730 PF17283 SprT-like zinc ribbon domain INQ46_03730 PF10263 SprT-like family INQ46_03735 PF00083 Sugar (and other) transporter INQ46_03740 PF02772 S-adenosylmethionine synthetase, central domain INQ46_03740 PF00438 S-adenosylmethionine synthetase, N-terminal domain INQ46_03740 PF02773 S-adenosylmethionine synthetase, C-terminal domain INQ46_03750 PF17430 Uncharacterized YqgC-like INQ46_03760 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain INQ46_03760 PF17944 Arginine decarboxylase C-terminal helical extension INQ46_03760 PF17810 Arginine decarboxylase helical bundle domain INQ46_03765 PF00491 Arginase family INQ46_03770 PF01435 Peptidase family M48 INQ46_03775 PF02779 Transketolase, pyrimidine binding domain INQ46_03775 PF02780 Transketolase, C-terminal domain INQ46_03775 PF00456 Transketolase, thiamine diphosphate binding domain INQ46_03780 PF00005 ABC transporter INQ46_03785 PF00005 ABC transporter INQ46_03805 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain INQ46_03805 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain INQ46_03810 PF00162 Phosphoglycerate kinase INQ46_03815 PF01116 Fructose-bisphosphate aldolase class-II INQ46_03820 PF05552 Conserved TM helix INQ46_03820 PF00924 Mechanosensitive ion channel INQ46_03825 PF01810 LysE type translocator INQ46_03830 PF04402 Protein of unknown function (DUF541) INQ46_03835 PF03466 LysR substrate binding domain INQ46_03835 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ46_03840 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) INQ46_03845 PF01842 ACT domain INQ46_03845 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain INQ46_03845 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain INQ46_03850 PF01812 5-formyltetrahydrofolate cyclo-ligase family INQ46_03860 PF05164 Cell division protein ZapA INQ46_03865 PF03695 Uncharacterised protein family (UPF0149) INQ46_03870 PF00557 Metallopeptidase family M24 INQ46_03870 PF05195 Aminopeptidase P, N-terminal domain INQ46_03875 PF01494 FAD binding domain INQ46_03880 PF01494 FAD binding domain INQ46_03885 PF01571 Aminomethyltransferase folate-binding domain INQ46_03885 PF08669 Glycine cleavage T-protein C-terminal barrel domain INQ46_03890 PF01597 Glycine cleavage H-protein INQ46_03895 PF02347 Glycine cleavage system P-protein INQ46_03905 PF00232 Glycosyl hydrolase family 1 INQ46_03910 PF04266 ASCH domain INQ46_03915 PF03006 Haemolysin-III related INQ46_03920 PF01571 Aminomethyltransferase folate-binding domain INQ46_03925 PF03937 Flavinator of succinate dehydrogenase INQ46_03930 PF07254 Membrane-bound toxin component of toxin-antitoxin system INQ46_03935 PF00258 Flavodoxin INQ46_03940 PF00589 Phage integrase family INQ46_03940 PF02899 Phage integrase, N-terminal SAM-like domain INQ46_03945 PF10411 Disulfide bond isomerase protein N-terminus INQ46_03945 PF13098 Thioredoxin-like domain INQ46_03950 PF01368 DHH family INQ46_03950 PF17768 RecJ OB domain INQ46_03950 PF02272 DHHA1 domain INQ46_03960 PF00152 tRNA synthetases class II (D, K and N) INQ46_03960 PF01336 OB-fold nucleic acid binding domain INQ46_03965 PF00293 NUDIX domain INQ46_03970 PF01476 LysM domain INQ46_03970 PF01551 Peptidase family M23 INQ46_03995 PF01850 PIN domain INQ46_04000 PF13505 Outer membrane protein beta-barrel domain INQ46_04040 PF03222 Tryptophan/tyrosine permease family INQ46_04050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ46_04050 PF03466 LysR substrate binding domain INQ46_04055 PF00108 Thiolase, N-terminal domain INQ46_04055 PF02803 Thiolase, C-terminal domain INQ46_04060 PF04962 KduI/IolB family INQ46_04070 PF00083 Sugar (and other) transporter INQ46_04075 PF01177 Asp/Glu/Hydantoin racemase INQ46_04080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ46_04080 PF03466 LysR substrate binding domain INQ46_04085 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain INQ46_04085 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain INQ46_04090 PF00356 Bacterial regulatory proteins, lacI family INQ46_04095 PF00356 Bacterial regulatory proteins, lacI family INQ46_04100 PF00501 AMP-binding enzyme INQ46_04100 PF01553 Acyltransferase INQ46_04105 PF07690 Major Facilitator Superfamily INQ46_04110 PF00248 Aldo/keto reductase family INQ46_04115 PF06004 Bacterial protein of unknown function (DUF903) INQ46_04120 PF03741 Integral membrane protein TerC family INQ46_04125 PF02976 DNA mismatch repair enzyme MutH INQ46_04130 PF00293 NUDIX domain INQ46_04135 PF00391 PEP-utilising enzyme, mobile domain INQ46_04135 PF05524 PEP-utilising enzyme, N-terminal INQ46_04135 PF01590 GAF domain INQ46_04135 PF02896 PEP-utilising enzyme, TIM barrel domain INQ46_04140 PF01790 Prolipoprotein diacylglyceryl transferase INQ46_04145 PF00303 Thymidylate synthase INQ46_04150 PF07963 Prokaryotic N-terminal methylation motif INQ46_04155 PF07963 Prokaryotic N-terminal methylation motif INQ46_04160 PF10713 Protein of unknown function (DUF2509) INQ46_04165 PF12528 Type II secretion prepilin peptidase dependent protein C INQ46_04165 PF07963 Prokaryotic N-terminal methylation motif INQ46_04170 PF17946 RecC C-terminal domain INQ46_04175 PF00675 Insulinase (Peptidase family M16) INQ46_04175 PF05193 Peptidase M16 inactive domain INQ46_04175 PF16187 Middle or third domain of peptidase_M16 INQ46_04180 PF13361 UvrD-like helicase C-terminal domain INQ46_04180 PF00580 UvrD/REP helicase N-terminal domain INQ46_04180 PF12705 PD-(D/E)XK nuclease superfamily INQ46_04185 PF13538 UvrD-like helicase C-terminal domain INQ46_04190 PF00696 Amino acid kinase family INQ46_04190 PF00583 Acetyltransferase (GNAT) family INQ46_04195 PF11741 AMIN domain INQ46_04195 PF01520 N-acetylmuramoyl-L-alanine amidase INQ46_04210 PF03562 MltA specific insert domain INQ46_04210 PF06725 3D domain INQ46_04215 PF00899 ThiF family INQ46_04220 PF00892 EamA-like transporter family INQ46_04225 PF02657 Fe-S metabolism associated domain INQ46_04230 PF00266 Aminotransferase class-V INQ46_04235 PF06004 Bacterial protein of unknown function (DUF903) INQ46_04240 PF03466 LysR substrate binding domain INQ46_04240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ46_04245 PF04241 Protein of unknown function (DUF423) INQ46_04250 PF18125 RlmM ferredoxin-like domain INQ46_04250 PF01728 FtsJ-like methyltransferase INQ46_04255 PF08220 DeoR-like helix-turn-helix domain INQ46_04255 PF00455 DeoR C terminal sensor domain INQ46_04260 PF05025 RbsD / FucU transport protein family INQ46_04270 PF07882 L-fucose isomerase, second N-terminal domain INQ46_04270 PF07881 L-fucose isomerase, first N-terminal domain INQ46_04270 PF02952 L-fucose isomerase, C-terminal domain INQ46_04275 PF07690 Major Facilitator Superfamily INQ46_04280 PF00596 Class II Aldolase and Adducin N-terminal domain INQ46_04290 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain INQ46_04290 PF01367 5'-3' exonuclease, C-terminal SAM fold INQ46_04295 PF03315 Serine dehydratase beta chain INQ46_04295 PF03313 Serine dehydratase alpha chain INQ46_04305 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases INQ46_04305 PF03641 Possible lysine decarboxylase INQ46_04305 PF11892 Domain of unknown function (DUF3412) INQ46_04310 PF14489 QueF-like protein INQ46_04310 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term INQ46_04315 PF07348 Syd protein (SUKH-2) INQ46_04320 PF04287 tRNA pseudouridine synthase C INQ46_04325 PF00849 RNA pseudouridylate synthase INQ46_04330 PF00258 Flavodoxin INQ46_04340 PF07690 Major Facilitator Superfamily INQ46_04345 PF13378 Enolase C-terminal domain-like INQ46_04345 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain INQ46_04350 PF13378 Enolase C-terminal domain-like INQ46_04355 PF02595 Glycerate kinase family INQ46_04360 PF00672 HAMP domain INQ46_04360 PF00072 Response regulator receiver domain INQ46_04360 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) INQ46_04360 PF01627 Hpt domain INQ46_04360 PF00512 His Kinase A (phospho-acceptor) domain INQ46_04360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase INQ46_04365 PF01938 TRAM domain INQ46_04365 PF05958 tRNA (Uracil-5-)-methyltransferase INQ46_04370 PF13291 ACT domain INQ46_04370 PF02824 TGS domain INQ46_04370 PF04607 Region found in RelA / SpoT proteins INQ46_04375 PF03819 MazG nucleotide pyrophosphohydrolase domain INQ46_04380 PF06418 CTP synthase N-terminus INQ46_04380 PF00117 Glutamine amidotransferase class-I INQ46_04385 PF03952 Enolase, N-terminal domain INQ46_04385 PF00113 Enolase, C-terminal TIM barrel domain INQ46_04390 PF04055 Radical SAM superfamily INQ46_04395 PF12706 Beta-lactamase superfamily domain INQ46_04395 PF03099 Biotin/lipoate A/B protein ligase family INQ46_04400 PF01242 6-pyruvoyl tetrahydropterin synthase INQ46_04405 PF00258 Flavodoxin INQ46_04405 PF00175 Oxidoreductase NAD-binding domain INQ46_04405 PF00667 FAD binding domain INQ46_04410 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain INQ46_04410 PF01077 Nitrite and sulphite reductase 4Fe-4S domain INQ46_04415 PF01507 Phosphoadenosine phosphosulfate reductase family INQ46_04420 PF11047 Salmonella outer protein D INQ46_04430 PF04389 Peptidase family M28 INQ46_04435 PF01507 Phosphoadenosine phosphosulfate reductase family INQ46_04440 PF00009 Elongation factor Tu GTP binding domain INQ46_04450 PF12084 Protein of unknown function (DUF3561) INQ46_04455 PF04977 Septum formation initiator INQ46_04460 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase INQ46_04465 PF02542 YgbB family INQ46_04470 PF01142 tRNA pseudouridine synthase D (TruD) INQ46_04475 PF01975 Survival protein SurE INQ46_04485 PF01476 LysM domain INQ46_04485 PF01551 Peptidase family M23 INQ46_04490 PF04545 Sigma-70, region 4 INQ46_04490 PF04542 Sigma-70 region 2 INQ46_04490 PF00140 Sigma-70 factor, region 1.2 INQ46_04490 PF04539 Sigma-70 region 3 INQ46_04505 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase INQ46_04510 PF02441 Flavoprotein INQ46_04515 PF01047 MarR family INQ46_04520 PF08220 DeoR-like helix-turn-helix domain INQ46_04520 PF00455 DeoR C terminal sensor domain INQ46_04525 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase INQ46_04525 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase INQ46_04530 PF17042 Nucleotide-binding C-terminal domain INQ46_04530 PF07005 Sugar-binding N-terminal domain INQ46_04535 PF00596 Class II Aldolase and Adducin N-terminal domain INQ46_04540 PF01261 Xylose isomerase-like TIM barrel INQ46_04545 PF01370 NAD dependent epimerase/dehydratase family INQ46_04550 PF02447 GntP family permease INQ46_04555 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ46_04555 PF03466 LysR substrate binding domain INQ46_04560 PF07690 Major Facilitator Superfamily INQ46_04570 PF01624 MutS domain I INQ46_04570 PF00488 MutS domain V INQ46_04570 PF05190 MutS family domain IV INQ46_04570 PF05192 MutS domain III INQ46_04570 PF05188 MutS domain II INQ46_04610 PF04741 InvH outer membrane lipoprotein INQ46_04615 PF12833 Helix-turn-helix domain INQ46_04620 PF03958 Bacterial type II/III secretion system short domain INQ46_04620 PF00263 Bacterial type II and III secretion system protein INQ46_04625 PF07201 HrpJ-like domain INQ46_04630 PF00771 FHIPEP family INQ46_04635 PF03519 Invasion protein B family INQ46_04640 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain INQ46_04640 PF02874 ATP synthase alpha/beta family, beta-barrel domain INQ46_04640 PF18269 T3SS EscN ATPase C-terminal domain INQ46_04645 PF02090 Salmonella surface presentation of antigen gene type M protein INQ46_04650 PF02510 Surface presentation of antigens protein INQ46_04655 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term INQ46_04660 PF00813 FliP family INQ46_04665 PF01313 Bacterial export proteins, family 3 INQ46_04670 PF01311 Bacterial export proteins, family 1 INQ46_04675 PF01312 FlhB HrpN YscU SpaS Family INQ46_04680 PF07720 Tetratricopeptide repeat INQ46_04685 PF16535 Type III cell invasion protein SipB INQ46_04685 PF04888 Secretion system effector C (SseC) like family INQ46_04690 PF09599 Salmonella-Shigella invasin protein C (IpaC_SipC) INQ46_04695 PF06511 Type III secretion systems tip complex components INQ46_04700 PF09052 SipA N-terminal domain INQ46_04705 PF00550 Phosphopantetheine attachment site INQ46_04735 PF01464 Transglycosylase SLT domain INQ46_04740 PF00486 Transcriptional regulatory protein, C terminal INQ46_04745 PF12833 Helix-turn-helix domain INQ46_04750 PF09480 Type III secretion system protein PrgH-EprH (PrgH) INQ46_04755 PF09392 Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF INQ46_04765 PF01514 Secretory protein of YscJ/FliF family INQ46_04770 PF09482 Bacterial type III secretion apparatus protein (OrgA_MxiK) INQ46_04785 PF12833 Helix-turn-helix domain INQ46_04795 PF00950 ABC 3 transport family INQ46_04800 PF00950 ABC 3 transport family INQ46_04805 PF00005 ABC transporter INQ46_04810 PF01297 Zinc-uptake complex component A periplasmic INQ46_04815 PF11756 Nitrous oxide-stimulated promoter INQ46_04820 PF02954 Bacterial regulatory protein, Fis family INQ46_04820 PF00158 Sigma-54 interaction domain INQ46_04820 PF01590 GAF domain INQ46_04825 PF02769 AIR synthase related protein, C-terminal domain INQ46_04825 PF00586 AIR synthase related protein, N-terminal domain INQ46_04830 PF01924 Hydrogenase formation hypA family INQ46_04835 PF01455 HupF/HypC family INQ46_04840 PF02492 CobW/HypB/UreG, nucleotide-binding domain INQ46_04845 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA INQ46_04850 PF11046 Transcriptional repressor of hyc and hyp operons INQ46_04855 PF13247 4Fe-4S dicluster domain INQ46_04860 PF00361 Proton-conducting membrane transporter INQ46_04865 PF00146 NADH dehydrogenase INQ46_04870 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit INQ46_04870 PF00374 Nickel-dependent hydrogenase INQ46_04870 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit INQ46_04875 PF12838 4Fe-4S dicluster domain INQ46_04880 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit INQ46_04885 PF07450 Formate hydrogenlyase maturation protein HycH INQ46_04890 PF01750 Hydrogenase maturation protease INQ46_04900 PF12800 4Fe-4S binding domain INQ46_04900 PF13247 4Fe-4S dicluster domain INQ46_04905 PF17788 HypF Kae1-like domain INQ46_04905 PF07503 HypF finger INQ46_04905 PF00708 Acylphosphatase INQ46_04905 PF01300 Telomere recombination INQ46_04910 PF07992 Pyridine nucleotide-disulphide oxidoreductase INQ46_04910 PF18113 Rubredoxin binding C-terminal domain INQ46_04915 PF00258 Flavodoxin INQ46_04915 PF00753 Metallo-beta-lactamase superfamily INQ46_04915 PF00301 Rubredoxin INQ46_04920 PF00158 Sigma-54 interaction domain INQ46_04920 PF01590 GAF domain INQ46_04925 PF01380 SIS domain INQ46_04925 PF00571 CBS domain INQ46_04930 PF00455 DeoR C terminal sensor domain INQ46_04930 PF08220 DeoR-like helix-turn-helix domain INQ46_04945 PF07663 Sorbitol phosphotransferase enzyme II C-terminus INQ46_04945 PF03612 Sorbitol phosphotransferase enzyme II N-terminus INQ46_04955 PF13406 Transglycosylase SLT domain INQ46_04960 PF02464 Competence-damaged protein INQ46_04965 PF00154 recA bacterial DNA recombination protein INQ46_04970 PF02631 RecX family INQ46_04975 PF02272 DHHA1 domain INQ46_04975 PF01411 tRNA synthetases class II (A) INQ46_04975 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain INQ46_04980 PF02599 Global regulator protein family INQ46_05010 PF13419 Haloacid dehalogenase-like hydrolase INQ46_05015 PF09335 SNARE associated Golgi protein INQ46_05020 PF04262 Glutamate-cysteine ligase INQ46_05025 PF02664 S-Ribosylhomocysteinase (LuxS) INQ46_05035 PF07690 Major Facilitator Superfamily INQ46_05040 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion INQ46_05040 PF00529 HlyD membrane-fusion protein of T1SS INQ46_05045 PF01047 MarR family INQ46_05055 PF04069 Substrate binding domain of ABC-type glycine betaine transport system INQ46_05060 PF00528 Binding-protein-dependent transport system inner membrane component INQ46_05065 PF00571 CBS domain INQ46_05065 PF00005 ABC transporter INQ46_05070 PF00268 Ribonucleotide reductase, small chain INQ46_05075 PF08343 Ribonucleotide reductase N-terminal INQ46_05075 PF00317 Ribonucleotide reductase, all-alpha domain INQ46_05075 PF02867 Ribonucleotide reductase, barrel domain INQ46_05080 PF07972 NrdI Flavodoxin like INQ46_05085 PF00462 Glutaredoxin INQ46_05090 PF02627 Carboxymuconolactone decarboxylase family INQ46_05095 PF00155 Aminotransferase class I and II INQ46_05095 PF00392 Bacterial regulatory proteins, gntR family INQ46_05100 PF05957 Bacterial protein of unknown function (DUF883) INQ46_05105 PF09400 Protein of unknown function (DUF2002) INQ46_05110 PF06610 L-alanine exporter INQ46_05115 PF00816 H-NS histone family INQ46_05125 PF00581 Rhodanese-like domain INQ46_05125 PF11127 Protein of unknown function (DUF2892) INQ46_05130 PF01022 Bacterial regulatory protein, arsR family INQ46_05135 PF01679 Proteolipid membrane potential modulator INQ46_05140 PF01476 LysM domain INQ46_05140 PF04972 BON domain INQ46_05145 PF07729 FCD domain INQ46_05145 PF00392 Bacterial regulatory proteins, gntR family INQ46_05150 PF00324 Amino acid permease INQ46_05155 PF00202 Aminotransferase class-III INQ46_05160 PF00171 Aldehyde dehydrogenase family INQ46_05165 PF01266 FAD dependent oxidoreductase INQ46_05170 PF08943 CsiD INQ46_05175 PF01970 Tripartite tricarboxylate transporter TctA family INQ46_05190 PF00072 Response regulator receiver domain INQ46_05190 PF00486 Transcriptional regulatory protein, C terminal INQ46_05195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase INQ46_05195 PF00512 His Kinase A (phospho-acceptor) domain INQ46_05200 PF03824 High-affinity nickel-transport protein INQ46_05210 PF04393 Protein of unknown function (DUF535) INQ46_05215 PF00805 Pentapeptide repeats (8 copies) INQ46_05225 PF00593 TonB dependent receptor INQ46_05225 PF07715 TonB-dependent Receptor Plug Domain INQ46_05230 PF00756 Putative esterase INQ46_05240 PF00005 ABC transporter INQ46_05240 PF00664 ABC transporter transmembrane region INQ46_05245 PF06722 Protein of unknown function (DUF1205) INQ46_05255 PF02796 Helix-turn-helix domain of resolvase INQ46_05255 PF00239 Resolvase, N terminal domain INQ46_05260 PF08884 Flagellin D3 domain INQ46_05260 PF00700 Bacterial flagellin C-terminal helical region INQ46_05260 PF00669 Bacterial flagellin N-terminal helical region INQ46_05265 PF03614 Repressor of phase-1 flagellin INQ46_05290 PF04606 Ogr/Delta-like zinc finger INQ46_05315 PF15977 Winged helix-turn-helix DNA binding INQ46_05320 PF00144 Beta-lactamase INQ46_05325 PF05992 SbmA/BacA-like family INQ46_05330 PF07759 Protein of unknown function (DUF1615) INQ46_05335 PF10954 Protein of unknown function (DUF2755) INQ46_05340 PF10953 Protein of unknown function (DUF2754) INQ46_05345 PF07478 D-ala D-ala ligase C-terminus INQ46_05345 PF01820 D-ala D-ala ligase N-terminus INQ46_05355 PF07690 Major Facilitator Superfamily INQ46_05360 PF10796 Sigma-S stabilisation anti-adaptor protein INQ46_05365 PF07769 psiF repeat INQ46_05370 PF05230 MASE2 domain INQ46_05370 PF00990 Diguanylate cyclase, GGDEF domain INQ46_05375 PF14748 Pyrroline-5-carboxylate reductase dimerisation INQ46_05375 PF03807 NADP oxidoreductase coenzyme F420-dependent INQ46_05380 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 INQ46_05385 PF01202 Shikimate kinase INQ46_05390 PF16362 YaiA protein INQ46_05395 PF07302 AroM protein INQ46_05400 PF06865 Pyrimidine/purine nucleoside phosphorylase INQ46_05405 PF04381 Putative exonuclease, RdgC INQ46_05410 PF00480 ROK family INQ46_05415 PF07690 Major Facilitator Superfamily INQ46_05420 PF13476 AAA domain INQ46_05425 PF00149 Calcineurin-like phosphoesterase INQ46_05425 PF12320 Type 5 capsule protein repressor C-terminal domain INQ46_05430 PF00072 Response regulator receiver domain INQ46_05430 PF00486 Transcriptional regulatory protein, C terminal INQ46_05435 PF00512 His Kinase A (phospho-acceptor) domain INQ46_05435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase INQ46_05435 PF11808 Phosphate regulon sensor protein PhoR INQ46_05435 PF00989 PAS fold INQ46_05440 PF05525 Branched-chain amino acid transport protein INQ46_05445 PF00324 Amino acid permease INQ46_05450 PF00128 Alpha amylase, catalytic domain INQ46_05450 PF02903 Alpha amylase, N-terminal ig-like domain INQ46_05455 PF00578 AhpC/TSA family INQ46_05455 PF10417 C-terminal domain of 1-Cys peroxiredoxin INQ46_05460 PF04336 Acyl carrier protein phosphodiesterase INQ46_05465 PF02547 Queuosine biosynthesis protein INQ46_05470 PF01702 Queuine tRNA-ribosyltransferase INQ46_05475 PF02699 Preprotein translocase subunit INQ46_05480 PF13721 SecD export protein N-terminal TM region INQ46_05480 PF07549 SecD/SecF GG Motif INQ46_05480 PF02355 Protein export membrane protein INQ46_05485 PF02355 Protein export membrane protein INQ46_05485 PF07549 SecD/SecF GG Motif INQ46_05500 PF01844 HNH endonuclease INQ46_05510 PF03502 Nucleoside-specific channel-forming protein, Tsx INQ46_05515 PF11622 Protein of unknown function (DUF3251) INQ46_05520 PF03477 ATP cone domain INQ46_05525 PF01872 RibD C-terminal domain INQ46_05525 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region INQ46_05530 PF00885 6,7-dimethyl-8-ribityllumazine synthase INQ46_05535 PF01029 NusB family INQ46_05540 PF02769 AIR synthase related protein, C-terminal domain INQ46_05540 PF00586 AIR synthase related protein, N-terminal domain INQ46_05545 PF04608 Phosphatidylglycerophosphatase A INQ46_05550 PF00248 Aldo/keto reductase family INQ46_05555 PF02780 Transketolase, C-terminal domain INQ46_05555 PF02779 Transketolase, pyrimidine binding domain INQ46_05555 PF13292 1-deoxy-D-xylulose-5-phosphate synthase INQ46_05560 PF00348 Polyprenyl synthetase INQ46_05565 PF02609 Exonuclease VII small subunit INQ46_05570 PF02568 Thiamine biosynthesis protein (ThiI) INQ46_05570 PF02926 THUMP domain INQ46_05575 PF00528 Binding-protein-dependent transport system inner membrane component INQ46_05580 PF00528 Binding-protein-dependent transport system inner membrane component INQ46_05590 PF01547 Bacterial extracellular solute-binding protein INQ46_05595 PF00392 Bacterial regulatory proteins, gntR family INQ46_05595 PF07702 UTRA domain INQ46_05610 PF01965 DJ-1/PfpI family INQ46_05615 PF08546 Ketopantoate reductase PanE/ApbA C terminal INQ46_05615 PF02558 Ketopantoate reductase PanE/ApbA INQ46_05620 PF04461 Protein of unknown function (DUF520) INQ46_05625 PF07690 Major Facilitator Superfamily INQ46_05640 PF01040 UbiA prenyltransferase family INQ46_05645 PF03626 Prokaryotic Cytochrome C oxidase subunit IV INQ46_05650 PF00510 Cytochrome c oxidase subunit III INQ46_05655 PF00115 Cytochrome C and Quinol oxidase polypeptide I INQ46_05660 PF06481 COX Aromatic Rich Motif INQ46_05660 PF00116 Cytochrome C oxidase subunit II, periplasmic domain INQ46_05665 PF07690 Major Facilitator Superfamily INQ46_05670 PF08139 Prokaryotic membrane lipoprotein lipid attachment site INQ46_05670 PF03923 Uncharacterized lipoprotein INQ46_05675 PF01722 BolA-like protein INQ46_05680 PF05697 Bacterial trigger factor protein (TF) INQ46_05680 PF05698 Bacterial trigger factor protein (TF) C-terminus INQ46_05680 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase INQ46_05685 PF00574 Clp protease INQ46_05690 PF06689 ClpX C4-type zinc finger INQ46_05690 PF10431 C-terminal, D2-small domain, of ClpB protein INQ46_05690 PF07724 AAA domain (Cdc48 subfamily) INQ46_05695 PF00004 ATPase family associated with various cellular activities (AAA) INQ46_05695 PF05362 Lon protease (S16) C-terminal proteolytic domain INQ46_05695 PF02190 ATP-dependent protease La (LON) substrate-binding domain INQ46_05700 PF00216 Bacterial DNA-binding protein INQ46_05705 PF13145 PPIC-type PPIASE domain INQ46_05720 PF06508 Queuosine biosynthesis protein QueC INQ46_05725 PF12793 Sugar transport-related sRNA regulator N-term INQ46_05725 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle INQ46_05740 PF01037 Lrp/AsnC ligand binding domain INQ46_05740 PF13404 AsnC-type helix-turn-helix domain INQ46_05745 PF00005 ABC transporter INQ46_05745 PF00664 ABC transporter transmembrane region INQ46_05750 PF00005 ABC transporter INQ46_05750 PF00664 ABC transporter transmembrane region INQ46_05755 PF00543 Nitrogen regulatory protein P-II INQ46_05760 PF00909 Ammonium Transporter Family INQ46_05770 PF09619 Type III secretion system lipoprotein chaperone (YscW) INQ46_05775 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain INQ46_05785 PF00563 EAL domain INQ46_05785 PF12792 CSS motif domain associated with EAL INQ46_05790 PF01197 Ribosomal protein L31 INQ46_05795 PF00444 Ribosomal protein L36 INQ46_05805 PF01797 Transposase IS200 like INQ46_05810 PF10777 Inner membrane protein YlaC INQ46_05815 PF14602 Hexapeptide repeat of succinyl-transferase INQ46_05815 PF12464 Maltose acetyltransferase INQ46_05820 PF05321 Haemolysin expression modulating protein INQ46_05825 PF10757 Biofilm formation regulator YbaJ INQ46_05830 PF00873 AcrB/AcrD/AcrF family INQ46_05835 PF00529 HlyD membrane-fusion protein of T1SS INQ46_05835 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion INQ46_05840 PF00440 Bacterial regulatory proteins, tetR family INQ46_05840 PF08361 MAATS-type transcriptional repressor, C-terminal region INQ46_05845 PF00924 Mechanosensitive ion channel INQ46_05845 PF12794 Mechanosensitive ion channel inner membrane domain 1 INQ46_05845 PF12795 Mechanosensitive ion channel porin domain INQ46_05850 PF04754 Putative transposase, YhgA-like INQ46_05855 PF10689 Protein of unknown function (DUF2496) INQ46_05860 PF07445 Primosomal replication protein priC INQ46_05865 PF04304 Protein of unknown function (DUF454) INQ46_05870 PF00156 Phosphoribosyl transferase domain INQ46_05875 PF12169 DNA polymerase III subunits gamma and tau domain III INQ46_05875 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding INQ46_05875 PF12170 DNA polymerase III tau subunit V interacting with alpha INQ46_05880 PF02575 YbaB/EbfC DNA-binding family INQ46_05885 PF13662 Toprim domain INQ46_05885 PF02132 RecR protein INQ46_05890 PF00183 Hsp90 protein INQ46_05890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase INQ46_05900 PF05191 Adenylate kinase, active site lid INQ46_05905 PF00762 Ferrochelatase INQ46_05910 PF07859 alpha/beta hydrolase fold INQ46_05915 PF00294 pfkB family carbohydrate kinase INQ46_05920 PF00999 Sodium/hydrogen exchanger family INQ46_05920 PF02254 TrkA-N domain INQ46_05925 PF07690 Major Facilitator Superfamily INQ46_05930 PF02872 5'-nucleotidase, C-terminal domain INQ46_05930 PF00149 Calcineurin-like phosphoesterase INQ46_05935 PF04073 Aminoacyl-tRNA editing domain INQ46_05940 PF01963 TraB family INQ46_05950 PF00403 Heavy-metal-associated domain INQ46_05955 PF13411 MerR HTH family regulatory protein INQ46_05960 PF01957 NfeD-like C-terminal, partner-binding INQ46_05965 PF01145 SPFH domain / Band 7 family INQ46_05965 PF16200 C-terminal region of band_7 INQ46_05970 PF00005 ABC transporter INQ46_05975 PF03649 Uncharacterised protein family (UPF0014) INQ46_05980 PF00085 Thioredoxin INQ46_05985 PF00106 short chain dehydrogenase INQ46_05990 PF13472 GDSL-like Lipase/Acylhydrolase family INQ46_05995 PF00005 ABC transporter INQ46_06010 PF03180 NLPA lipoprotein INQ46_06015 PF09383 NIL domain INQ46_06015 PF00005 ABC transporter INQ46_06020 PF00528 Binding-protein-dependent transport system inner membrane component INQ46_06030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ46_06030 PF03466 LysR substrate binding domain INQ46_06035 PF04115 Ureidoglycolate lyase INQ46_06040 PF09339 IclR helix-turn-helix domain INQ46_06040 PF01614 Bacterial transcriptional regulator INQ46_06045 PF00205 Thiamine pyrophosphate enzyme, central domain INQ46_06045 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain INQ46_06045 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain INQ46_06050 PF01261 Xylose isomerase-like TIM barrel INQ46_06055 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase INQ46_06055 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase INQ46_06075 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin INQ46_06080 PF01979 Amidohydrolase family INQ46_06085 PF00860 Permease family INQ46_06090 PF02595 Glycerate kinase family INQ46_06095 PF07883 Cupin domain INQ46_06095 PF05899 Protein of unknown function (DUF861) INQ46_06105 PF02615 Malate/L-lactate dehydrogenase INQ46_06110 PF02629 CoA binding domain INQ46_06110 PF00549 CoA-ligase INQ46_06115 PF06545 Protein of unknown function (DUF1116) INQ46_06120 PF11392 Protein of unknown function (DUF2877) INQ46_06125 PF00696 Amino acid kinase family INQ46_06130 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain INQ46_06130 PF02222 ATP-grasp domain INQ46_06135 PF00731 AIR carboxylase INQ46_06140 PF12850 Calcineurin-like phosphoesterase superfamily domain INQ46_06145 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD INQ46_06150 PF01406 tRNA synthetases class I (C) catalytic domain INQ46_06150 PF09190 DALR domain INQ46_06155 PF04307 LexA-binding, inner membrane-associated putative hydrolase INQ46_06165 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain INQ46_06165 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain INQ46_06170 PF00419 Fimbrial protein INQ46_06180 PF02753 Pili assembly chaperone PapD, C-terminal domain INQ46_06180 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain INQ46_06185 PF00577 Outer membrane usher protein INQ46_06185 PF13953 PapC C-terminal domain INQ46_06185 PF13954 PapC N-terminal domain INQ46_06190 PF00419 Fimbrial protein INQ46_06195 PF00419 Fimbrial protein INQ46_06200 PF00072 Response regulator receiver domain INQ46_06200 PF00196 Bacterial regulatory proteins, luxR family INQ46_06215 PF00196 Bacterial regulatory proteins, luxR family INQ46_06245 PF00535 Glycosyl transferase family 2 INQ46_06250 PF04138 GtrA-like protein INQ46_06265 PF12852 Cupin INQ46_06265 PF12833 Helix-turn-helix domain INQ46_06285 PF07338 Protein of unknown function (DUF1471) INQ46_06290 PF04224 Protein of unknown function, DUF417 INQ46_06300 PF00324 Amino acid permease INQ46_06305 PF00924 Mechanosensitive ion channel INQ46_06310 PF03797 Autotransporter beta-domain INQ46_06310 PF00657 GDSL-like Lipase/Acylhydrolase INQ46_06320 PF00881 Nitroreductase family INQ46_06325 PF04237 YjbR INQ46_06330 PF00440 Bacterial regulatory proteins, tetR family INQ46_06330 PF16295 Tetracyclin repressor-like, C-terminal domain INQ46_06335 PF12833 Helix-turn-helix domain INQ46_06340 PF06643 Protein of unknown function (DUF1158) INQ46_06345 PF04107 Glutamate-cysteine ligase family 2(GCS2) INQ46_06350 PF17837 4'-phosphopantetheinyl transferase N-terminal domain INQ46_06350 PF01648 4'-phosphopantetheinyl transferase superfamily INQ46_06355 PF00593 TonB dependent receptor INQ46_06355 PF07715 TonB-dependent Receptor Plug Domain INQ46_06360 PF00756 Putative esterase INQ46_06360 PF11806 Domain of unknown function (DUF3327) INQ46_06365 PF03621 MbtH-like protein INQ46_06370 PF00550 Phosphopantetheine attachment site INQ46_06370 PF00668 Condensation domain INQ46_06370 PF13193 AMP-binding enzyme C-terminal domain INQ46_06370 PF00501 AMP-binding enzyme INQ46_06370 PF00975 Thioesterase domain INQ46_06375 PF02706 Chain length determinant protein INQ46_06380 PF00005 ABC transporter INQ46_06385 PF01032 FecCD transport family INQ46_06390 PF01032 FecCD transport family INQ46_06395 PF05977 Transmembrane secretion effector INQ46_06400 PF01497 Periplasmic binding protein INQ46_06405 PF00425 chorismate binding enzyme INQ46_06410 PF13193 AMP-binding enzyme C-terminal domain INQ46_06410 PF00501 AMP-binding enzyme INQ46_06415 PF00550 Phosphopantetheine attachment site INQ46_06415 PF00857 Isochorismatase family INQ46_06425 PF03061 Thioesterase superfamily INQ46_06430 PF02554 Carbon starvation protein CstA INQ46_06430 PF13722 5TM C-terminal transporter carbon starvation CstA INQ46_06435 PF04328 Selenoprotein, putative INQ46_06440 PF00465 Iron-containing alcohol dehydrogenase INQ46_06445 PF00155 Aminotransferase class I and II INQ46_06450 PF02195 ParB-like nuclease domain INQ46_06455 PF11922 Domain of unknown function (DUF3440) INQ46_06455 PF01507 Phosphoadenosine phosphosulfate reductase family INQ46_06460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ46_06460 PF03466 LysR substrate binding domain INQ46_06465 PF13098 Thioredoxin-like domain INQ46_06470 PF10417 C-terminal domain of 1-Cys peroxiredoxin INQ46_06470 PF00578 AhpC/TSA family INQ46_06475 PF13192 Thioredoxin domain INQ46_06475 PF07992 Pyridine nucleotide-disulphide oxidoreductase INQ46_06485 PF04879 Molybdopterin oxidoreductase Fe4S4 domain INQ46_06485 PF00384 Molybdopterin oxidoreductase INQ46_06485 PF01568 Molydopterin dinucleotide binding domain INQ46_06490 PF13247 4Fe-4S dicluster domain INQ46_06500 PF00582 Universal stress protein family INQ46_06505 PF00107 Zinc-binding dehydrogenase INQ46_06505 PF08240 Alcohol dehydrogenase GroES-like domain INQ46_06505 PF13823 Alcohol dehydrogenase GroES-associated INQ46_06510 PF14760 Rnk N-terminus INQ46_06510 PF01272 Transcription elongation factor, GreA/GreB, C-term INQ46_06515 PF00445 Ribonuclease T2 family INQ46_06520 PF00939 Sodium:sulfate symporter transmembrane region INQ46_06525 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase INQ46_06530 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase INQ46_06535 PF04223 Citrate lyase, alpha subunit (CitF) INQ46_06540 PF03328 HpcH/HpaI aldolase/citrate lyase family INQ46_06545 PF06857 Malonate decarboxylase delta subunit (MdcD) INQ46_06550 PF08218 Citrate lyase ligase C-terminal domain INQ46_06555 PF00989 PAS fold INQ46_06555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase INQ46_06555 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain INQ46_06555 PF17203 Single cache domain 3 INQ46_06560 PF00072 Response regulator receiver domain INQ46_06560 PF12431 Transcriptional regulator INQ46_06565 PF03606 C4-dicarboxylate anaerobic carrier INQ46_06570 PF07017 Antimicrobial peptide resistance and lipid A acylation protein PagP INQ46_06575 PF00313 'Cold-shock' DNA-binding domain INQ46_06580 PF02537 CrcB-like protein, Camphor Resistance (CrcB) INQ46_06585 PF00795 Carbon-nitrogen hydrolase INQ46_06590 PF02416 mttA/Hcf106 family INQ46_06595 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family INQ46_06595 PF04055 Radical SAM superfamily INQ46_06600 PF03466 LysR substrate binding domain INQ46_06600 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ46_06605 PF03099 Biotin/lipoate A/B protein ligase family INQ46_06610 PF04359 Protein of unknown function (DUF493) INQ46_06615 PF00768 D-alanyl-D-alanine carboxypeptidase INQ46_06615 PF07943 Penicillin-binding protein 5, C-terminal domain INQ46_06620 PF03330 Lytic transglycolase INQ46_06620 PF05036 Sporulation related domain INQ46_06625 PF01098 Cell cycle protein INQ46_06630 PF03717 Penicillin-binding Protein dimerisation domain INQ46_06630 PF00905 Penicillin binding protein transpeptidase domain INQ46_06635 PF02590 Predicted SPOUT methyltransferase INQ46_06645 PF00300 Histidine phosphatase superfamily (branch 1) INQ46_06650 PF00155 Aminotransferase class I and II INQ46_06655 PF01467 Cytidylyltransferase-like INQ46_06660 PF14840 Processivity clamp loader gamma complex DNA pol III C-term INQ46_06660 PF06144 DNA polymerase III, delta subunit INQ46_06665 PF04390 Lipopolysaccharide-assembly INQ46_06670 PF13603 Leucyl-tRNA synthetase, Domain 2 INQ46_06670 PF08264 Anticodon-binding domain of tRNA INQ46_06670 PF00133 tRNA synthetases class I (I, L, M and V) INQ46_06680 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus INQ46_06685 PF03812 2-keto-3-deoxygluconate permease INQ46_06690 PF00989 PAS fold INQ46_06690 PF00158 Sigma-54 interaction domain INQ46_06690 PF02954 Bacterial regulatory protein, Fis family INQ46_06695 PF07295 Zinc-ribbon containing domain INQ46_06710 PF00005 ABC transporter INQ46_06715 PF00528 Binding-protein-dependent transport system inner membrane component INQ46_06720 PF00528 Binding-protein-dependent transport system inner membrane component INQ46_06725 PF00497 Bacterial extracellular solute-binding proteins, family 3 INQ46_06730 PF00795 Carbon-nitrogen hydrolase INQ46_06735 PF00571 CBS domain INQ46_06735 PF03471 Transporter associated domain INQ46_06740 PF02130 Uncharacterized protein family UPF0054 INQ46_06745 PF02562 PhoH-like protein INQ46_06750 PF01938 TRAM domain INQ46_06750 PF00919 Uncharacterized protein family UPF0004 INQ46_06750 PF04055 Radical SAM superfamily INQ46_06755 PF01494 FAD binding domain INQ46_06795 PF00733 Asparagine synthase INQ46_06795 PF13537 Glutamine amidotransferase domain INQ46_06800 PF13344 Haloacid dehalogenase-like hydrolase INQ46_06805 PF00480 ROK family INQ46_06805 PF01047 MarR family INQ46_06810 PF01979 Amidohydrolase family INQ46_06815 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase INQ46_06820 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 INQ46_06820 PF00367 phosphotransferase system, EIIB INQ46_06820 PF02378 Phosphotransferase system, EIIC INQ46_06825 PF00749 tRNA synthetases class I (E and Q), catalytic domain INQ46_06825 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain INQ46_06830 PF03573 outer membrane porin, OprD family INQ46_06835 PF13982 YbfN-like lipoprotein INQ46_06840 PF07690 Major Facilitator Superfamily INQ46_06850 PF00890 FAD binding domain INQ46_06850 PF14537 Cytochrome c3 INQ46_06855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ46_06855 PF03466 LysR substrate binding domain INQ46_06860 PF01475 Ferric uptake regulator family INQ46_06870 PF00258 Flavodoxin INQ46_06875 PF01402 Ribbon-helix-helix protein, copG family INQ46_06880 PF12697 Alpha/beta hydrolase family INQ46_06885 PF03925 SeqA protein C-terminal domain INQ46_06885 PF17206 SeqA protein N-terminal domain INQ46_06890 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I INQ46_06890 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II INQ46_06890 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III INQ46_06890 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain INQ46_06895 PF01848 Hok/gef family INQ46_06915 PF05840 Bacteriophage replication gene A protein (GPA) INQ46_06920 PF02086 D12 class N6 adenine-specific DNA methyltransferase INQ46_06985 PF00589 Phage integrase family INQ46_06985 PF02899 Phage integrase, N-terminal SAM-like domain INQ46_06995 PF13520 Amino acid permease INQ46_07000 PF01276 Orn/Lys/Arg decarboxylase, major domain INQ46_07000 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain INQ46_07000 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain INQ46_07005 PF10940 Protein of unknown function (DUF2618) INQ46_07015 PF13493 Domain of unknown function (DUF4118) INQ46_07015 PF13492 GAF domain INQ46_07015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase INQ46_07015 PF00512 His Kinase A (phospho-acceptor) domain INQ46_07015 PF02702 Osmosensitive K+ channel His kinase sensor domain INQ46_07020 PF02669 K+-transporting ATPase, c chain INQ46_07030 PF03814 Potassium-transporting ATPase A subunit INQ46_07035 PF09604 F subunit of K+-transporting ATPase (Potass_KdpF) INQ46_07040 PF10725 Protein of unknown function (DUF2517) INQ46_07045 PF00875 DNA photolyase INQ46_07045 PF03441 FAD binding domain of DNA photolyase INQ46_07050 PF00854 POT family INQ46_07055 PF01784 NIF3 (NGG1p interacting factor 3) INQ46_07060 PF02682 Carboxyltransferase domain, subdomain C and D INQ46_07065 PF02626 Carboxyltransferase domain, subdomain A and B INQ46_07070 PF03746 LamB/YcsF family INQ46_07080 PF00589 Phage integrase family INQ46_07095 PF03275 UDP-galactopyranose mutase INQ46_07110 PF01061 ABC-2 type transporter INQ46_07115 PF00005 ABC transporter INQ46_07140 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain INQ46_07140 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain INQ46_07140 PF06827 Zinc finger found in FPG and IleRS INQ46_07145 PF05145 Transition state regulatory protein AbrB INQ46_07150 PF00285 Citrate synthase, C-terminal domain INQ46_07160 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit INQ46_07165 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit INQ46_07170 PF02910 Fumarate reductase flavoprotein C-term INQ46_07170 PF00890 FAD binding domain INQ46_07175 PF13085 2Fe-2S iron-sulfur cluster binding domain INQ46_07180 PF16078 2-oxoglutarate dehydrogenase N-terminus INQ46_07180 PF00676 Dehydrogenase E1 component INQ46_07180 PF02779 Transketolase, pyrimidine binding domain INQ46_07180 PF16870 2-oxoglutarate dehydrogenase C-terminal INQ46_07185 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) INQ46_07185 PF00364 Biotin-requiring enzyme INQ46_07185 PF02817 e3 binding domain INQ46_07190 PF00549 CoA-ligase INQ46_07190 PF08442 ATP-grasp domain INQ46_07195 PF02629 CoA binding domain INQ46_07195 PF00549 CoA-ligase INQ46_07200 PF01654 Cytochrome bd terminal oxidase subunit I INQ46_07205 PF02322 Cytochrome bd terminal oxidase subunit II INQ46_07210 PF08173 Membrane bound YbgT-like protein INQ46_07215 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) INQ46_07220 PF03061 Thioesterase superfamily INQ46_07225 PF01618 MotA/TolQ/ExbB proton channel family INQ46_07230 PF02472 Biopolymer transport protein ExbD/TolR INQ46_07235 PF06519 TolA C-terminal INQ46_07240 PF04052 TolB amino-terminal domain INQ46_07240 PF07676 WD40-like Beta Propeller Repeat INQ46_07245 PF00691 OmpA family INQ46_07250 PF16331 TolA binding protein trimerisation INQ46_07250 PF13174 Tetratricopeptide repeat INQ46_07280 PF02445 Quinolinate synthetase A protein INQ46_07285 PF04973 Nicotinamide mononucleotide transporter INQ46_07290 PF01545 Cation efflux family INQ46_07295 PF13985 YbgS-like protein INQ46_07300 PF00793 DAHP synthetase I family INQ46_07305 PF01032 FecCD transport family INQ46_07310 PF00005 ABC transporter INQ46_07315 PF00300 Histidine phosphatase superfamily (branch 1) INQ46_07320 PF01263 Aldose 1-epimerase INQ46_07325 PF08544 GHMP kinases C terminal INQ46_07325 PF10509 Galactokinase galactose-binding signature INQ46_07325 PF00288 GHMP kinases N terminal domain INQ46_07330 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain INQ46_07330 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain INQ46_07335 PF16363 GDP-mannose 4,6 dehydratase INQ46_07345 PF00005 ABC transporter INQ46_07350 PF03459 TOBE domain INQ46_07350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ46_07355 PF10766 Multidrug efflux pump-associated protein AcrZ INQ46_07365 PF00528 Binding-protein-dependent transport system inner membrane component INQ46_07370 PF00005 ABC transporter INQ46_07370 PF03459 TOBE domain INQ46_07380 PF10282 Lactonase, 7-bladed beta-propeller INQ46_07385 PF01095 Pectinesterase INQ46_07390 PF01979 Amidohydrolase family INQ46_07395 PF00491 Arginase family INQ46_07400 PF00392 Bacterial regulatory proteins, gntR family INQ46_07400 PF07702 UTRA domain INQ46_07405 PF17391 Urocanase N-terminal domain INQ46_07405 PF01175 Urocanase Rossmann-like domain INQ46_07405 PF17392 Urocanase C-terminal domain INQ46_07410 PF00221 Aromatic amino acid lyase INQ46_07415 PF01161 Phosphatidylethanolamine-binding protein INQ46_07420 PF00202 Aminotransferase class-III INQ46_07425 PF06968 Biotin and Thiamin Synthesis associated domain INQ46_07425 PF04055 Radical SAM superfamily INQ46_07430 PF00155 Aminotransferase class I and II INQ46_07435 PF08241 Methyltransferase domain INQ46_07445 PF17757 UvrB interaction domain INQ46_07445 PF12344 Ultra-violet resistance protein B INQ46_07445 PF02151 UvrB/uvrC motif INQ46_07445 PF04851 Type III restriction enzyme, res subunit INQ46_07445 PF00271 Helicase conserved C-terminal domain INQ46_07455 PF14496 C-terminal novel E3 ligase, LRR-interacting INQ46_07455 PF12468 Type III secretion system leucine rich repeat protein INQ46_07460 PF01933 Uncharacterised protein family UPF0052 INQ46_07465 PF06463 Molybdenum Cofactor Synthesis C INQ46_07465 PF04055 Radical SAM superfamily INQ46_07470 PF00994 Probable molybdopterin binding domain INQ46_07475 PF01967 MoaC family INQ46_07480 PF02597 ThiS family INQ46_07485 PF02391 MoaE protein INQ46_07490 PF01027 Inhibitor of apoptosis-promoting Bax1 INQ46_07505 PF03706 Lysylphosphatidylglycerol synthase TM region INQ46_07510 PF13091 PLD-like domain INQ46_07515 PF03372 Endonuclease/Exonuclease/phosphatase family INQ46_07520 PF11076 Putative inner membrane protein YbhQ INQ46_07535 PF00005 ABC transporter INQ46_07540 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion INQ46_07545 PF09209 Tetracyclin repressor-like, C-terminal domain INQ46_07545 PF00440 Bacterial regulatory proteins, tetR family INQ46_07550 PF00270 DEAD/DEAH box helicase INQ46_07550 PF00271 Helicase conserved C-terminal domain INQ46_07555 PF13307 Helicase C-terminal domain INQ46_07555 PF06733 DEAD_2 INQ46_07560 PF02885 Glycosyl transferase family, helical bundle domain INQ46_07570 PF07338 Protein of unknown function (DUF1471) INQ46_07575 PF01258 Prokaryotic dksA/traR C4-type zinc finger INQ46_07580 PF05971 RNA methyltransferase INQ46_07585 PF00924 Mechanosensitive ion channel INQ46_07590 PF00005 ABC transporter INQ46_07595 PF00528 Binding-protein-dependent transport system inner membrane component INQ46_07600 PF00497 Bacterial extracellular solute-binding proteins, family 3 INQ46_07605 PF00210 Ferritin-like domain INQ46_07610 PF00892 EamA-like transporter family INQ46_07615 PF13505 Outer membrane protein beta-barrel domain INQ46_07620 PF00884 Sulfatase INQ46_07630 PF01325 Iron dependent repressor, N-terminal DNA binding domain INQ46_07630 PF02742 Iron dependent repressor, metal binding and dimerisation domain INQ46_07635 PF03600 Citrate transporter INQ46_07640 PF03734 L,D-transpeptidase catalytic domain INQ46_07640 PF17969 L,D-transpeptidase C-terminal domain INQ46_07645 PF00005 ABC transporter INQ46_07645 PF12848 ABC transporter INQ46_07650 PF07350 Protein of unknown function (DUF1479) INQ46_07660 PF01228 Glycine radical INQ46_07660 PF02901 Pyruvate formate lyase-like INQ46_07665 PF04055 Radical SAM superfamily INQ46_07670 PF00899 ThiF family INQ46_07675 PF00994 Probable molybdopterin binding domain INQ46_07675 PF03454 MoeA C-terminal region (domain IV) INQ46_07675 PF03453 MoeA N-terminal region (domain I and II) INQ46_07680 PF01112 Asparaginase INQ46_07685 PF08352 Oligopeptide/dipeptide transporter, C-terminal region INQ46_07685 PF00005 ABC transporter INQ46_07690 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle INQ46_07695 PF00528 Binding-protein-dependent transport system inner membrane component INQ46_07700 PF12911 N-terminal TM domain of oligopeptide transport permease C INQ46_07700 PF00528 Binding-protein-dependent transport system inner membrane component INQ46_07705 PF00919 Uncharacterized protein family UPF0004 INQ46_07705 PF04055 Radical SAM superfamily INQ46_07705 PF18693 TRAM domain INQ46_07710 PF10799 Biofilm formation protein (YliH/bssR) INQ46_07715 PF07995 Glucose / Sorbosone dehydrogenase INQ46_07720 PF00043 Glutathione S-transferase, C-terminal domain INQ46_07720 PF13417 Glutathione S-transferase, N-terminal domain INQ46_07725 PF00768 D-alanyl-D-alanine carboxypeptidase INQ46_07725 PF07943 Penicillin-binding protein 5, C-terminal domain INQ46_07730 PF00455 DeoR C terminal sensor domain INQ46_07730 PF08220 DeoR-like helix-turn-helix domain INQ46_07735 PF01569 PAP2 superfamily INQ46_07740 PF07690 Major Facilitator Superfamily INQ46_07750 PF07690 Major Facilitator Superfamily INQ46_07755 PF00440 Bacterial regulatory proteins, tetR family INQ46_07760 PF06826 Predicted Permease Membrane Region INQ46_07760 PF02080 TrkA-C domain INQ46_07765 PF11045 Putative inner membrane protein of Enterobacteriaceae INQ46_07770 PF00462 Glutaredoxin INQ46_07775 PF07214 Protein of unknown function (DUF1418) INQ46_07780 PF00881 Nitroreductase family INQ46_07785 PF18030 RimK PreATP-grasp domain INQ46_07785 PF08443 RimK-like ATP-grasp domain INQ46_07790 PF10722 Putative bacterial sensory transduction regulator INQ46_07795 PF13416 Bacterial extracellular solute-binding protein INQ46_07800 PF08402 TOBE domain INQ46_07800 PF00005 ABC transporter INQ46_07805 PF00528 Binding-protein-dependent transport system inner membrane component INQ46_07810 PF00528 Binding-protein-dependent transport system inner membrane component INQ46_07815 PF10767 Protein of unknown function (DUF2593) INQ46_07820 PF05958 tRNA (Uracil-5-)-methyltransferase INQ46_07845 PF00497 Bacterial extracellular solute-binding proteins, family 3 INQ46_07850 PF00528 Binding-protein-dependent transport system inner membrane component INQ46_07855 PF00528 Binding-protein-dependent transport system inner membrane component INQ46_07860 PF00497 Bacterial extracellular solute-binding proteins, family 3 INQ46_07865 PF00005 ABC transporter INQ46_07870 PF12883 Protein of unknown function (DUF3828) INQ46_07875 PF01906 Putative heavy-metal-binding INQ46_07880 PF01510 N-acetylmuramoyl-L-alanine amidase INQ46_07885 PF01370 NAD dependent epimerase/dehydratase family INQ46_07890 PF13460 NAD(P)H-binding INQ46_07890 PF11066 Protein of unknown function (DUF2867) INQ46_07895 PF01212 Beta-eliminating lyase INQ46_07900 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain INQ46_07900 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain INQ46_07900 PF00205 Thiamine pyrophosphate enzyme, central domain INQ46_07905 PF00970 Oxidoreductase FAD-binding domain INQ46_07905 PF00111 2Fe-2S iron-sulfur cluster binding domain INQ46_07905 PF00175 Oxidoreductase NAD-binding domain INQ46_07910 PF03063 Prismane/CO dehydrogenase family INQ46_07915 PF03956 Lysine exporter LysO INQ46_07920 PF11398 Protein of unknown function (DUF2813) INQ46_07925 PF04393 Protein of unknown function (DUF535) INQ46_07930 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion INQ46_07935 PF12704 MacB-like periplasmic core domain INQ46_07935 PF02687 FtsX-like permease family INQ46_07935 PF00005 ABC transporter INQ46_07940 PF00313 'Cold-shock' DNA-binding domain INQ46_07945 PF02617 ATP-dependent Clp protease adaptor protein ClpS INQ46_07950 PF10431 C-terminal, D2-small domain, of ClpB protein INQ46_07950 PF17871 AAA lid domain INQ46_07950 PF07724 AAA domain (Cdc48 subfamily) INQ46_07950 PF02861 Clp amino terminal domain, pathogenicity island component INQ46_07950 PF00004 ATPase family associated with various cellular activities (AAA) INQ46_07980 PF00857 Isochorismatase family INQ46_07985 PF02678 Pirin INQ46_07985 PF05726 Pirin C-terminal cupin domain INQ46_07990 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ46_07990 PF03466 LysR substrate binding domain INQ46_07995 PF01176 Translation initiation factor 1A / IF-1 INQ46_08005 PF03588 Leucyl/phenylalanyl-tRNA protein transferase INQ46_08010 PF00005 ABC transporter INQ46_08010 PF00664 ABC transporter transmembrane region INQ46_08015 PF00664 ABC transporter transmembrane region INQ46_08015 PF00005 ABC transporter INQ46_08020 PF07992 Pyridine nucleotide-disulphide oxidoreductase INQ46_08025 PF01037 Lrp/AsnC ligand binding domain INQ46_08030 PF01580 FtsK/SpoIIIE family INQ46_08030 PF09397 Ftsk gamma domain INQ46_08030 PF17854 FtsK alpha domain INQ46_08030 PF13491 4TM region of DNA translocase FtsK/SpoIIIE INQ46_08035 PF03548 Outer membrane lipoprotein carrier protein LolA INQ46_08040 PF16193 AAA C-terminal domain INQ46_08040 PF00004 ATPase family associated with various cellular activities (AAA) INQ46_08040 PF12002 MgsA AAA+ ATPase C terminal INQ46_08045 PF02403 Seryl-tRNA synthetase N-terminal domain INQ46_08045 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) INQ46_08050 PF00384 Molybdopterin oxidoreductase INQ46_08050 PF01568 Molydopterin dinucleotide binding domain INQ46_08050 PF04879 Molybdopterin oxidoreductase Fe4S4 domain INQ46_08055 PF13247 4Fe-4S dicluster domain INQ46_08055 PF12800 4Fe-4S binding domain INQ46_08060 PF04976 DMSO reductase anchor subunit (DmsC) INQ46_08065 PF07690 Major Facilitator Superfamily INQ46_08070 PF13520 Amino acid permease INQ46_08075 PF04055 Radical SAM superfamily INQ46_08080 PF11047 Salmonella outer protein D INQ46_08085 PF02901 Pyruvate formate lyase-like INQ46_08085 PF01228 Glycine radical INQ46_08090 PF01226 Formate/nitrite transporter INQ46_08095 PF18381 YcaO cyclodehydratase C-terminal domain INQ46_08095 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding INQ46_08100 PF04239 Protein of unknown function (DUF421) INQ46_08105 PF00266 Aminotransferase class-V INQ46_08110 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) INQ46_08115 PF01435 Peptidase family M48 INQ46_08120 PF02224 Cytidylate kinase INQ46_08125 PF00575 S1 RNA binding domain INQ46_08130 PF00216 Bacterial DNA-binding protein INQ46_08145 PF00664 ABC transporter transmembrane region INQ46_08145 PF00005 ABC transporter INQ46_08150 PF02606 Tetraacyldisaccharide-1-P 4'-kinase INQ46_08155 PF06224 Winged helix DNA-binding domain INQ46_08160 PF03966 Trm112p-like protein INQ46_08165 PF02348 Cytidylyltransferase INQ46_08170 PF01636 Phosphotransferase enzyme family INQ46_08175 PF02698 DUF218 domain INQ46_08180 PF13847 Methyltransferase domain INQ46_08185 PF17193 MukF C-terminal domain INQ46_08185 PF03882 MukF winged-helix domain INQ46_08185 PF17192 MukF middle domain INQ46_08190 PF04288 MukE-like family INQ46_08195 PF16330 MukB hinge domain INQ46_08195 PF04310 MukB N-terminal INQ46_08200 PF03734 L,D-transpeptidase catalytic domain INQ46_08200 PF01471 Putative peptidoglycan binding domain INQ46_08205 PF05951 Bacterial protein of unknown function (DUF882) INQ46_08210 PF00753 Metallo-beta-lactamase superfamily INQ46_08220 PF00155 Aminotransferase class I and II INQ46_08225 PF00267 Gram-negative porin INQ46_08230 PF01336 OB-fold nucleic acid binding domain INQ46_08230 PF00152 tRNA synthetases class II (D, K and N) INQ46_08235 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family INQ46_08235 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain INQ46_08240 PF00589 Phage integrase family INQ46_08240 PF12167 Arm DNA-binding domain INQ46_08300 PF15645 Dermonecrotoxin of the Papain-like fold INQ46_08310 PF11940 Domain of unknown function (DUF3458) Ig-like fold INQ46_08310 PF17432 Domain of unknown function (DUF3458_C) ARM repeats INQ46_08310 PF01433 Peptidase family M1 domain INQ46_08315 PF01180 Dihydroorotate dehydrogenase INQ46_08320 PF07126 Cell-division protein ZapC INQ46_08325 PF03476 MOSC N-terminal beta barrel domain INQ46_08325 PF03473 MOSC domain INQ46_08325 PF00111 2Fe-2S iron-sulfur cluster binding domain INQ46_08330 PF01170 Putative RNA methylase family UPF0020 INQ46_08330 PF02926 THUMP domain INQ46_08330 PF10672 S-adenosylmethionine-dependent methyltransferase INQ46_08335 PF00005 ABC transporter INQ46_08335 PF12848 ABC transporter INQ46_08335 PF16326 ABC transporter C-terminal domain INQ46_08340 PF04403 Paraquat-inducible protein A INQ46_08345 PF02470 MlaD protein INQ46_08350 PF03886 ABC-type transport auxiliary lipoprotein component INQ46_08355 PF04957 Ribosome modulation factor INQ46_08360 PF07977 FabA-like domain INQ46_08365 PF05362 Lon protease (S16) C-terminal proteolytic domain INQ46_08365 PF13654 AAA domain INQ46_08370 PF06303 MatP N-terminal domain INQ46_08370 PF17414 MatP C-terminal ribbon-helix-helix domain INQ46_08375 PF01389 OmpA-like transmembrane domain INQ46_08375 PF00691 OmpA family INQ46_08380 PF03846 Cell division inhibitor SulA INQ46_08385 PF04993 TfoX N-terminal domain INQ46_08385 PF04994 TfoX C-terminal domain INQ46_08390 PF12805 FUSC-like inner membrane protein yccS INQ46_08395 PF03733 Inner membrane component domain INQ46_08400 PF00580 UvrD/REP helicase N-terminal domain INQ46_08400 PF12462 DNA helicase IV / RNA helicase N terminal INQ46_08400 PF13361 UvrD-like helicase C-terminal domain INQ46_08405 PF02142 MGS-like domain INQ46_08410 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) INQ46_08415 PF13380 CoA binding domain INQ46_08420 PF08755 Hemimethylated DNA-binding protein YccV like INQ46_08425 PF17785 PUA-like domain INQ46_08425 PF10672 S-adenosylmethionine-dependent methyltransferase INQ46_08435 PF12833 Helix-turn-helix domain INQ46_08440 PF00708 Acylphosphatase INQ46_08445 PF04358 DsrC like protein INQ46_08450 PF01027 Inhibitor of apoptosis-promoting Bax1 INQ46_08470 PF01381 Helix-turn-helix INQ46_08490 PF02413 Caudovirales tail fibre assembly protein, lambda gpK INQ46_08565 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus INQ46_08565 PF01048 Phosphorylase superfamily INQ46_08585 PF17762 HTH domain found in ParB protein INQ46_08585 PF02195 ParB-like nuclease domain INQ46_08590 PF13676 TIR domain INQ46_08610 PF00589 Phage integrase family INQ46_08610 PF13356 Arm DNA-binding domain INQ46_08635 PF00717 Peptidase S24-like INQ46_08640 PF13438 Domain of unknown function (DUF4113) INQ46_08640 PF00817 impB/mucB/samB family INQ46_08640 PF11799 impB/mucB/samB family C-terminal domain INQ46_08645 PF00313 'Cold-shock' DNA-binding domain INQ46_08655 PF00267 Gram-negative porin INQ46_08660 PF05598 Transposase domain (DUF772) INQ46_08660 PF01609 Transposase DDE domain INQ46_08670 PF01966 HD domain INQ46_08675 PF18284 DNA methylase N-terminal domain INQ46_08675 PF00145 C-5 cytosine-specific DNA methylase INQ46_08680 PF03852 DNA mismatch endonuclease Vsr INQ46_08685 PF00892 EamA-like transporter family INQ46_08690 PF05661 Protein of unknown function (DUF808) INQ46_08695 PF09926 Uncharacterized small protein (DUF2158) INQ46_08700 PF17151 Periplasmic sensor domain INQ46_08700 PF00990 Diguanylate cyclase, GGDEF domain INQ46_08710 PF10733 Protein of unknown function (DUF2525) INQ46_08715 PF10781 Dextransucrase DSRB INQ46_08720 PF00196 Bacterial regulatory proteins, luxR family INQ46_08725 PF01311 Bacterial export proteins, family 1 INQ46_08730 PF01313 Bacterial export proteins, family 3 INQ46_08735 PF00813 FliP family INQ46_08740 PF04347 Flagellar biosynthesis protein, FliO INQ46_08745 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term INQ46_08745 PF16973 Flagellar motor switch protein FliN N-terminal INQ46_08750 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term INQ46_08750 PF02154 Flagellar motor switch protein FliM INQ46_08755 PF03748 Flagellar basal body-associated protein FliL INQ46_08760 PF02120 Flagellar hook-length control protein FliK INQ46_08765 PF02050 Flagellar FliJ protein INQ46_08770 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain INQ46_08770 PF18269 T3SS EscN ATPase C-terminal domain INQ46_08775 PF02108 Flagellar assembly protein FliH INQ46_08780 PF01706 FliG C-terminal domain INQ46_08780 PF14841 FliG middle domain INQ46_08780 PF14842 FliG N-terminal domain INQ46_08785 PF01514 Secretory protein of YscJ/FliF family INQ46_08785 PF08345 Flagellar M-ring protein C-terminal INQ46_08790 PF02049 Flagellar hook-basal body complex protein FliE INQ46_08800 PF01206 Sulfurtransferase TusA INQ46_08805 PF04143 Sulphur transport INQ46_08810 PF13987 YedD-like protein INQ46_08815 PF00128 Alpha amylase, catalytic domain INQ46_08815 PF02806 Alpha amylase, C-terminal all-beta domain INQ46_08820 PF05400 Flagellar protein FliT INQ46_08825 PF02561 Flagellar protein FliS INQ46_08830 PF07196 Flagellin hook IN motif INQ46_08830 PF07195 Flagellar hook-associated protein 2 C-terminus INQ46_08830 PF02465 Flagellar hook-associated protein 2 N-terminus INQ46_08835 PF00700 Bacterial flagellin C-terminal helical region INQ46_08835 PF08884 Flagellin D3 domain INQ46_08835 PF00669 Bacterial flagellin N-terminal helical region INQ46_08845 PF04542 Sigma-70 region 2 INQ46_08845 PF04539 Sigma-70 region 3 INQ46_08845 PF04545 Sigma-70, region 4 INQ46_08850 PF02899 Phage integrase, N-terminal SAM-like domain INQ46_08855 PF00497 Bacterial extracellular solute-binding proteins, family 3 INQ46_08860 PF00291 Pyridoxal-phosphate dependent enzyme INQ46_08865 PF00528 Binding-protein-dependent transport system inner membrane component INQ46_08870 PF00005 ABC transporter INQ46_08875 PF00196 Bacterial regulatory proteins, luxR family INQ46_08875 PF03472 Autoinducer binding domain INQ46_08880 PF10769 Protein of unknown function (DUF2594) INQ46_08890 PF00072 Response regulator receiver domain INQ46_08890 PF00196 Bacterial regulatory proteins, luxR family INQ46_08895 PF01541 GIY-YIG catalytic domain INQ46_08895 PF02151 UvrB/uvrC motif INQ46_08895 PF08459 UvrC Helix-hairpin-helix N-terminal INQ46_08900 PF01066 CDP-alcohol phosphatidyltransferase INQ46_08935 PF02810 SEC-C motif INQ46_08935 PF03695 Uncharacterised protein family (UPF0149) INQ46_08940 PF03222 Tryptophan/tyrosine permease family INQ46_08945 PF10678 Protein of unknown function (DUF2492) INQ46_08950 PF00210 Ferritin-like domain INQ46_08955 PF13992 YecR-like lipoprotein INQ46_08960 PF00210 Ferritin-like domain INQ46_08975 PF02358 Trehalose-phosphatase INQ46_08980 PF00982 Glycosyltransferase family 20 INQ46_08985 PF00582 Universal stress protein family INQ46_08995 PF05247 Flagellar transcriptional activator (FlhD) INQ46_09000 PF05280 Flagellar transcriptional activator (FlhC) INQ46_09005 PF01618 MotA/TolQ/ExbB proton channel family INQ46_09010 PF13677 Membrane MotB of proton-channel complex MotA/MotB INQ46_09010 PF00691 OmpA family INQ46_09015 PF01627 Hpt domain INQ46_09015 PF02895 Signal transducing histidine kinase, homodimeric domain INQ46_09015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase INQ46_09015 PF09078 CheY binding INQ46_09015 PF01584 CheW-like domain INQ46_09020 PF01584 CheW-like domain INQ46_09025 PF02203 Tar ligand binding domain homologue INQ46_09025 PF00672 HAMP domain INQ46_09025 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain INQ46_09030 PF03705 CheR methyltransferase, all-alpha domain INQ46_09030 PF01739 CheR methyltransferase, SAM binding domain INQ46_09035 PF00072 Response regulator receiver domain INQ46_09035 PF01339 CheB methylesterase INQ46_09040 PF00072 Response regulator receiver domain INQ46_09045 PF04344 Chemotaxis phosphatase, CheZ INQ46_09050 PF01312 FlhB HrpN YscU SpaS Family INQ46_09055 PF00771 FHIPEP family INQ46_09060 PF06366 Flagellar protein FlhE INQ46_09065 PF07470 Glycosyl Hydrolase Family 88 INQ46_09070 PF03717 Penicillin-binding Protein dimerisation domain INQ46_09070 PF00905 Penicillin binding protein transpeptidase domain INQ46_09075 PF03485 Arginyl tRNA synthetase N terminal domain INQ46_09075 PF00750 tRNA synthetases class I (R) INQ46_09075 PF05746 DALR anticodon binding domain INQ46_09080 PF06185 YecM protein INQ46_09085 PF03932 CutC family INQ46_09090 PF08003 Protein of unknown function (DUF1698) INQ46_09095 PF13649 Methyltransferase domain INQ46_09100 PF01124 MAPEG family INQ46_09105 PF01904 Protein of unknown function DUF72 INQ46_09125 PF12468 Type III secretion system leucine rich repeat protein INQ46_09125 PF14496 C-terminal novel E3 ligase, LRR-interacting INQ46_09135 PF02586 SOS response associated peptidase (SRAP) INQ46_09140 PF00857 Isochorismatase family INQ46_09145 PF00152 tRNA synthetases class II (D, K and N) INQ46_09145 PF02938 GAD domain INQ46_09145 PF01336 OB-fold nucleic acid binding domain INQ46_09150 PF00293 NUDIX domain INQ46_09155 PF01709 Transcriptional regulator INQ46_09160 PF02075 Crossover junction endodeoxyribonuclease RuvC INQ46_09165 PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family INQ46_09175 PF07499 RuvA, C-terminal domain INQ46_09175 PF01330 RuvA N terminal domain INQ46_09180 PF17864 RuvB AAA lid domain INQ46_09180 PF05496 Holliday junction DNA helicase RuvB P-loop domain INQ46_09180 PF05491 RuvB C-terminal winged helix domain INQ46_09185 PF00950 ABC 3 transport family INQ46_09190 PF00005 ABC transporter INQ46_09195 PF01297 Zinc-uptake complex component A periplasmic INQ46_09200 PF01476 LysM domain INQ46_09200 PF01551 Peptidase family M23 INQ46_09200 PF08525 Opacity-associated protein A N-terminal motif INQ46_09205 PF03279 Bacterial lipid A biosynthesis acyltransferase INQ46_09215 PF00224 Pyruvate kinase, barrel domain INQ46_09215 PF02887 Pyruvate kinase, alpha/beta domain INQ46_09220 PF01380 SIS domain INQ46_09220 PF01418 Helix-turn-helix domain, rpiR family INQ46_09225 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain INQ46_09225 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain INQ46_09230 PF00920 Dehydratase family INQ46_09235 PF01081 KDPG and KHG aldolase INQ46_09240 PF02222 ATP-grasp domain INQ46_09245 PF07130 YebG protein INQ46_09250 PF13995 YebF-like protein INQ46_09255 PF04391 Protein of unknown function (DUF533) INQ46_09260 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain INQ46_09260 PF00326 Prolyl oligopeptidase family INQ46_09265 PF00929 Exonuclease INQ46_09270 PF00795 Carbon-nitrogen hydrolase INQ46_09275 PF06440 DNA polymerase III, theta subunit INQ46_09280 PF04234 CopC domain INQ46_09285 PF05425 Copper resistance protein D INQ46_09290 PF10709 Protein of unknown function (DUF2511) INQ46_09295 PF09003 Bacteriophage lambda integrase, Arm DNA-binding domain INQ46_09295 PF00589 Phage integrase family INQ46_09310 PF06530 Phage antitermination protein Q INQ46_09325 PF00959 Phage lysozyme INQ46_09330 PF03245 Bacteriophage Rz lysis protein INQ46_09380 PF03335 Phage tail fibre repeat INQ46_09380 PF07484 Phage Tail Collar Domain INQ46_09390 PF02413 Caudovirales tail fibre assembly protein, lambda gpK INQ46_09395 PF07487 SopE GEF domain INQ46_09395 PF05364 Salmonella type III secretion SopE effector N-terminus INQ46_09445 PF00990 Diguanylate cyclase, GGDEF domain INQ46_09445 PF01590 GAF domain INQ46_09445 PF00563 EAL domain INQ46_09445 PF00360 Phytochrome region INQ46_09465 PF07166 Protein of unknown function (DUF1398) INQ46_09470 PF05364 Salmonella type III secretion SopE effector N-terminus INQ46_09470 PF07487 SopE GEF domain INQ46_09480 PF00149 Calcineurin-like phosphoesterase INQ46_09485 PF07358 Protein of unknown function (DUF1482) INQ46_09490 PF07351 Protein of unknown function (DUF1480) INQ46_09495 PF01189 16S rRNA methyltransferase RsmB/F INQ46_09495 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF INQ46_09495 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF INQ46_09500 PF02470 MlaD protein INQ46_09505 PF04403 Paraquat-inducible protein A INQ46_09510 PF13185 GAF domain INQ46_09515 PF04352 ProQ/FINO family INQ46_09515 PF17516 ProQ C-terminal domain INQ46_09520 PF00595 PDZ domain INQ46_09520 PF11818 C-terminal domain of tail specific protease (DUF3340) INQ46_09520 PF03572 Peptidase family S41 INQ46_09520 PF17804 Tail specific protease N-terminal domain INQ46_09525 PF01435 Peptidase family M48 INQ46_09530 PF07690 Major Facilitator Superfamily INQ46_09535 PF01614 Bacterial transcriptional regulator INQ46_09535 PF09339 IclR helix-turn-helix domain INQ46_09540 PF13996 YobH-like protein INQ46_09545 PF13998 MgrB protein INQ46_09550 PF13974 YebO-like protein INQ46_09555 PF10736 Protein of unknown function (DUF2627) INQ46_09560 PF00313 'Cold-shock' DNA-binding domain INQ46_09565 PF00905 Penicillin binding protein transpeptidase domain INQ46_09565 PF03717 Penicillin-binding Protein dimerisation domain INQ46_09570 PF13847 Methyltransferase domain INQ46_09575 PF02659 Putative manganese efflux pump INQ46_09580 PF06173 Protein of unknown function (DUF986) INQ46_09585 PF03613 PTS system mannose/fructose/sorbose family IID component INQ46_09590 PF03609 PTS system sorbose-specific iic component INQ46_09595 PF03830 PTS system sorbose subfamily IIB component INQ46_09595 PF03610 PTS system fructose IIA component INQ46_09600 PF03471 Transporter associated domain INQ46_09600 PF03741 Integral membrane protein TerC family INQ46_09605 PF12792 CSS motif domain associated with EAL INQ46_09605 PF00563 EAL domain INQ46_09610 PF03315 Serine dehydratase beta chain INQ46_09610 PF03313 Serine dehydratase alpha chain INQ46_09615 PF00293 NUDIX domain INQ46_09620 PF04715 Anthranilate synthase component I, N terminal region INQ46_09620 PF00425 chorismate binding enzyme INQ46_09625 PF03701 Uncharacterised protein family (UPF0181) INQ46_09630 PF01042 Endoribonuclease L-PSP INQ46_09635 PF13307 Helicase C-terminal domain INQ46_09635 PF04851 Type III restriction enzyme, res subunit INQ46_09640 PF00814 Glycoprotease family INQ46_09645 PF03843 Outer membrane lipoprotein Slp family INQ46_09650 PF13193 AMP-binding enzyme C-terminal domain INQ46_09650 PF00501 AMP-binding enzyme INQ46_09655 PF01612 3'-5' exonuclease INQ46_09655 PF00570 HRDC domain INQ46_09665 PF03776 Septum formation topological specificity factor MinE INQ46_09670 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain INQ46_09675 PF05209 Septum formation inhibitor MinC, N-terminal domain INQ46_09675 PF03775 Septum formation inhibitor MinC, C-terminal domain INQ46_09680 PF05166 YcgL domain INQ46_09685 PF01557 Fumarylacetoacetate (FAA) hydrolase family INQ46_09690 PF03692 Putative zinc- or iron-chelating domain INQ46_09700 PF08178 GnsA/GnsB toxin of bacterial toxin-antitoxin system INQ46_09710 PF02600 Disulfide bond formation protein DsbB INQ46_09715 PF06450 Bacterial Na+/H+ antiporter B (NhaB) INQ46_09720 PF00392 Bacterial regulatory proteins, gntR family INQ46_09720 PF07840 FadR C-terminal domain INQ46_09725 PF04293 SpoVR like protein INQ46_09730 PF01266 FAD dependent oxidoreductase INQ46_09735 PF01168 Alanine racemase, N-terminal domain INQ46_09735 PF00842 Alanine racemase, C-terminal domain INQ46_09740 PF00999 Sodium/hydrogen exchanger family INQ46_09740 PF02080 TrkA-C domain INQ46_09740 PF03471 Transporter associated domain INQ46_09745 PF02016 LD-carboxypeptidase N-terminal domain INQ46_09745 PF17676 LD-carboxypeptidase C-terminal domain INQ46_09750 PF01464 Transglycosylase SLT domain INQ46_09755 PF07238 PilZ domain INQ46_09755 PF07317 Flagellar regulator YcgR INQ46_09760 PF04226 Transglycosylase associated protein INQ46_09765 PF01204 Trehalase INQ46_09770 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain INQ46_09770 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase INQ46_09775 PF08173 Membrane bound YbgT-like protein INQ46_09780 PF02322 Cytochrome bd terminal oxidase subunit II INQ46_09785 PF01654 Cytochrome bd terminal oxidase subunit I INQ46_09790 PF04809 HupH hydrogenase expression protein, C-terminal conserved region INQ46_09795 PF07449 Hydrogenase-1 expression protein HyaE INQ46_09800 PF01750 Hydrogenase maturation protease INQ46_09805 PF01292 Prokaryotic cytochrome b561 INQ46_09810 PF00374 Nickel-dependent hydrogenase INQ46_09815 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal INQ46_09815 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit INQ46_09825 PF01926 50S ribosome-binding GTPase INQ46_09825 PF06071 Protein of unknown function (DUF933) INQ46_09830 PF01195 Peptidyl-tRNA hydrolase INQ46_09835 PF10762 Protein of unknown function (DUF2583) INQ46_09840 PF00916 Sulfate permease family INQ46_09840 PF01740 STAS domain INQ46_09845 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase INQ46_09845 PF14572 Phosphoribosyl synthetase-associated domain INQ46_09850 PF08544 GHMP kinases C terminal INQ46_09850 PF00288 GHMP kinases N terminal domain INQ46_09855 PF03550 Outer membrane lipoprotein LolB INQ46_09860 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain INQ46_09860 PF01488 Shikimate / quinate 5-dehydrogenase INQ46_09860 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain INQ46_09865 PF03462 PCRF domain INQ46_09865 PF00472 RF-1 domain INQ46_09870 PF13847 Methyltransferase domain INQ46_09870 PF17827 PrmC N-terminal domain INQ46_09875 PF04247 Invasion gene expression up-regulator, SirB INQ46_09880 PF13369 Transglutaminase-like superfamily INQ46_09885 PF00793 DAHP synthetase I family INQ46_09890 PF01699 Sodium/calcium exchanger protein INQ46_09895 PF06150 ChaB INQ46_09900 PF02635 DsrE/DsrF-like family INQ46_09905 PF11924 Inverse autotransporter, beta-domain INQ46_09910 PF00072 Response regulator receiver domain INQ46_09910 PF00196 Bacterial regulatory proteins, luxR family INQ46_09915 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term INQ46_09915 PF07730 Histidine kinase INQ46_09915 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase INQ46_09915 PF00672 HAMP domain INQ46_09920 PF07690 Major Facilitator Superfamily INQ46_09925 PF00384 Molybdopterin oxidoreductase INQ46_09925 PF01568 Molydopterin dinucleotide binding domain INQ46_09925 PF14710 Respiratory nitrate reductase alpha N-terminal INQ46_09930 PF14711 Respiratory nitrate reductase beta C-terminal INQ46_09930 PF13247 4Fe-4S dicluster domain INQ46_09935 PF02613 Nitrate reductase delta subunit INQ46_09940 PF02665 Nitrate reductase gamma subunit INQ46_09965 PF01842 ACT domain INQ46_09965 PF00551 Formyl transferase INQ46_09970 PF02810 SEC-C motif INQ46_09975 PF01734 Patatin-like phospholipase INQ46_09980 PF00072 Response regulator receiver domain INQ46_09985 PF00483 Nucleotidyl transferase INQ46_09990 PF00816 H-NS histone family INQ46_09995 PF00265 Thymidine kinase INQ46_10000 PF00465 Iron-containing alcohol dehydrogenase INQ46_10000 PF00171 Aldehyde dehydrogenase family INQ46_10005 PF01914 MarC family integral membrane protein INQ46_10010 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle INQ46_10015 PF00528 Binding-protein-dependent transport system inner membrane component INQ46_10020 PF12911 N-terminal TM domain of oligopeptide transport permease C INQ46_10020 PF00528 Binding-protein-dependent transport system inner membrane component INQ46_10025 PF08352 Oligopeptide/dipeptide transporter, C-terminal region INQ46_10025 PF00005 ABC transporter INQ46_10030 PF08352 Oligopeptide/dipeptide transporter, C-terminal region INQ46_10030 PF00005 ABC transporter INQ46_10035 PF00520 Ion transport protein INQ46_10035 PF00027 Cyclic nucleotide-binding domain INQ46_10040 PF04269 Protein of unknown function, DUF440 INQ46_10045 PF13396 Phospholipase_D-nuclease N-terminal INQ46_10045 PF13091 PLD-like domain INQ46_10055 PF03795 YCII-related domain INQ46_10060 PF03544 Gram-negative bacterial TonB protein C-terminal INQ46_10065 PF03061 Thioesterase superfamily INQ46_10070 PF04279 Intracellular septation protein A INQ46_10080 PF03692 Putative zinc- or iron-chelating domain INQ46_10085 PF03922 OmpW family INQ46_10090 PF05067 Manganese containing catalase INQ46_10095 PF05974 Domain of unknown function (DUF892) INQ46_10100 PF05974 Domain of unknown function (DUF892) INQ46_10105 PF10685 Stress-induced bacterial acidophilic repeat motif INQ46_10110 PF00290 Tryptophan synthase alpha chain INQ46_10115 PF00291 Pyridoxal-phosphate dependent enzyme INQ46_10120 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase INQ46_10120 PF00218 Indole-3-glycerol phosphate synthase INQ46_10125 PF00117 Glutamine amidotransferase class-I INQ46_10125 PF00591 Glycosyl transferase family, a/b domain INQ46_10125 PF02885 Glycosyl transferase family, helical bundle domain INQ46_10130 PF04715 Anthranilate synthase component I, N terminal region INQ46_10130 PF00425 chorismate binding enzyme INQ46_10135 PF08255 Trp-operon Leader Peptide INQ46_10140 PF02811 PHP domain INQ46_10145 PF01300 Telomere recombination INQ46_10150 PF00849 RNA pseudouridylate synthase INQ46_10150 PF01479 S4 domain INQ46_10155 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP INQ46_10160 PF00106 short chain dehydrogenase INQ46_10165 PF08496 Peptidase family S49 N-terminal INQ46_10165 PF01343 Peptidase family S49 INQ46_10170 PF10692 Protein of unknown function (DUF2498) INQ46_10175 PF01396 Topoisomerase DNA binding C4 zinc finger INQ46_10175 PF01751 Toprim domain INQ46_10175 PF08272 Topoisomerase I zinc-ribbon-like INQ46_10175 PF01131 DNA topoisomerase INQ46_10180 PF03466 LysR substrate binding domain INQ46_10180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ46_10195 PF00330 Aconitase family (aconitate hydratase) INQ46_10195 PF00694 Aconitase C-terminal domain INQ46_10200 PF00925 GTP cyclohydrolase II INQ46_10205 PF01569 PAP2 superfamily INQ46_10210 PF06305 Lipopolysaccharide assembly protein A domain INQ46_10215 PF18073 Rubredoxin metal binding domain INQ46_10220 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family INQ46_10225 PF01253 Translation initiation factor SUI1 INQ46_10230 PF05433 Glycine zipper 2TM domain INQ46_10235 PF00455 DeoR C terminal sensor domain INQ46_10235 PF08220 DeoR-like helix-turn-helix domain INQ46_10245 PF00990 Diguanylate cyclase, GGDEF domain INQ46_10245 PF00563 EAL domain INQ46_10245 PF13426 PAS domain INQ46_10250 PF17876 Cold shock domain INQ46_10250 PF08206 Ribonuclease B OB domain INQ46_10250 PF00773 RNB domain INQ46_10250 PF00575 S1 RNA binding domain INQ46_10285 PF00005 ABC transporter INQ46_10290 PF00005 ABC transporter INQ46_10290 PF08352 Oligopeptide/dipeptide transporter, C-terminal region INQ46_10295 PF00528 Binding-protein-dependent transport system inner membrane component INQ46_10295 PF12911 N-terminal TM domain of oligopeptide transport permease C INQ46_10325 PF00528 Binding-protein-dependent transport system inner membrane component INQ46_10330 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle INQ46_10335 PF02954 Bacterial regulatory protein, Fis family INQ46_10335 PF00158 Sigma-54 interaction domain INQ46_10340 PF04012 PspA/IM30 family INQ46_10345 PF06667 Phage shock protein B INQ46_10350 PF04024 PspC domain INQ46_10355 PF09584 Phage shock protein PspD (Phageshock_PspD) INQ46_10360 PF00581 Rhodanese-like domain INQ46_10365 PF04317 YcjX-like family, DUF463 INQ46_10370 PF05128 Domain of unknown function (DUF697) INQ46_10375 PF00158 Sigma-54 interaction domain INQ46_10375 PF18024 Helix-turn-helix domain INQ46_10380 PF08534 Redoxin INQ46_10385 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain INQ46_10385 PF13378 Enolase C-terminal domain-like INQ46_10390 PF00246 Zinc carboxypeptidase INQ46_10395 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle INQ46_10405 PF03466 LysR substrate binding domain INQ46_10405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ46_10430 PF00440 Bacterial regulatory proteins, tetR family INQ46_10445 PF06445 GyrI-like small molecule binding domain INQ46_10445 PF12833 Helix-turn-helix domain INQ46_10465 PF08534 Redoxin INQ46_10485 PF00924 Mechanosensitive ion channel INQ46_10490 PF10749 Protein of unknown function (DUF2534) INQ46_10495 PF00582 Universal stress protein family INQ46_10500 PF00027 Cyclic nucleotide-binding domain INQ46_10500 PF13545 Crp-like helix-turn-helix domain INQ46_10505 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain INQ46_10505 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain INQ46_10510 PF01713 Smr domain INQ46_10515 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain INQ46_10515 PF00672 HAMP domain INQ46_10515 PF02203 Tar ligand binding domain homologue INQ46_10520 PF01544 CorA-like Mg2+ transporter protein INQ46_10525 PF00270 DEAD/DEAH box helicase INQ46_10525 PF03880 DbpA RNA binding domain INQ46_10525 PF00271 Helicase conserved C-terminal domain INQ46_10530 PF01171 PP-loop family INQ46_10540 PF00893 Small Multidrug Resistance protein INQ46_10545 PF00582 Universal stress protein family INQ46_10555 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase INQ46_10555 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg INQ46_10555 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II INQ46_10555 PF10371 Domain of unknown function INQ46_10555 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain INQ46_10565 PF03891 Domain of unknown function (DUF333) INQ46_10570 PF03724 META domain INQ46_10575 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain INQ46_10575 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain INQ46_10580 PF11739 Dicarboxylate transport INQ46_10585 PF13617 YnbE-like lipoprotein INQ46_10590 PF07027 Protein of unknown function (DUF1318) INQ46_10600 PF02525 Flavodoxin-like fold INQ46_10605 PF04408 Helicase associated domain (HA2) INQ46_10605 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold INQ46_10605 PF11898 Domain of unknown function (DUF3418) INQ46_10605 PF00270 DEAD/DEAH box helicase INQ46_10605 PF00271 Helicase conserved C-terminal domain INQ46_10610 PF02698 DUF218 domain INQ46_10615 PF01292 Prokaryotic cytochrome b561 INQ46_10620 PF08242 Methyltransferase domain INQ46_10635 PF00528 Binding-protein-dependent transport system inner membrane component INQ46_10640 PF00005 ABC transporter INQ46_10645 PF00528 Binding-protein-dependent transport system inner membrane component INQ46_10650 PF00497 Bacterial extracellular solute-binding proteins, family 3 INQ46_10665 PF00657 GDSL-like Lipase/Acylhydrolase INQ46_10665 PF06767 Sif protein INQ46_10680 PF02583 Metal-sensitive transcriptional repressor INQ46_10685 PF00107 Zinc-binding dehydrogenase INQ46_10685 PF08240 Alcohol dehydrogenase GroES-like domain INQ46_10690 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain INQ46_10690 PF02203 Tar ligand binding domain homologue INQ46_10690 PF00672 HAMP domain INQ46_10695 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ46_10695 PF03466 LysR substrate binding domain INQ46_10700 PF07063 Domain of unknown function (DUF1338) INQ46_10705 PF00135 Carboxylesterase family INQ46_10710 PF04349 Periplasmic glucan biosynthesis protein, MdoG INQ46_10725 PF13700 Domain of unknown function (DUF4158) INQ46_10725 PF01526 Tn3 transposase DDE domain INQ46_10730 PF00239 Resolvase, N terminal domain INQ46_10730 PF02796 Helix-turn-helix domain of resolvase INQ46_10765 PF00834 Ribulose-phosphate 3 epimerase family INQ46_10770 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 INQ46_10775 PF03437 BtpA family INQ46_10780 PF03611 PTS system sugar-specific permease component INQ46_10785 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit INQ46_10790 PF05343 M42 glutamyl aminopeptidase INQ46_10795 PF13302 Acetyltransferase (GNAT) domain INQ46_10800 PF18836 Beta solenoid repeat from YDCK INQ46_10805 PF03595 Voltage-dependent anion channel INQ46_10810 PF03848 Tellurite resistance protein TehB INQ46_10815 PF11769 Protein of unknown function (DUF3313) INQ46_10820 PF03594 Benzoate membrane transport protein INQ46_10825 PF01381 Helix-turn-helix INQ46_10825 PF07883 Cupin domain INQ46_10830 PF12392 Collagenase INQ46_10830 PF01136 Peptidase family U32 INQ46_10835 PF10829 Protein of unknown function (DUF2554) INQ46_10855 PF01427 D-ala-D-ala dipeptidase INQ46_10860 PF00392 Bacterial regulatory proteins, gntR family INQ46_10860 PF00155 Aminotransferase class I and II INQ46_10865 PF00171 Aldehyde dehydrogenase family INQ46_10875 PF10753 Toxin GhoT_OrtT INQ46_10895 PF10735 Protein of unknown function (DUF2526) INQ46_10900 PF04657 Putative inner membrane exporter, YdcZ INQ46_10910 PF00107 Zinc-binding dehydrogenase INQ46_10910 PF16884 N-terminal domain of oxidoreductase INQ46_10915 PF00392 Bacterial regulatory proteins, gntR family INQ46_10915 PF07729 FCD domain INQ46_10920 PF07715 TonB-dependent Receptor Plug Domain INQ46_10920 PF00593 TonB dependent receptor INQ46_10930 PF06004 Bacterial protein of unknown function (DUF903) INQ46_10935 PF00324 Amino acid permease INQ46_10945 PF00797 N-acetyltransferase INQ46_10950 PF02567 Phenazine biosynthesis-like protein INQ46_10955 PF02665 Nitrate reductase gamma subunit INQ46_10960 PF02613 Nitrate reductase delta subunit INQ46_10965 PF14711 Respiratory nitrate reductase beta C-terminal INQ46_10965 PF13247 4Fe-4S dicluster domain INQ46_10975 PF07690 Major Facilitator Superfamily INQ46_10980 PF00440 Bacterial regulatory proteins, tetR family INQ46_10985 PF07690 Major Facilitator Superfamily INQ46_10995 PF00267 Gram-negative porin INQ46_11000 PF00892 EamA-like transporter family INQ46_11010 PF12800 4Fe-4S binding domain INQ46_11010 PF13247 4Fe-4S dicluster domain INQ46_11010 PF09163 Formate dehydrogenase N, transmembrane INQ46_11015 PF01292 Prokaryotic cytochrome b561 INQ46_11020 PF00107 Zinc-binding dehydrogenase INQ46_11020 PF08240 Alcohol dehydrogenase GroES-like domain INQ46_11025 PF03949 Malic enzyme, NAD binding domain INQ46_11025 PF00390 Malic enzyme, N-terminal domain INQ46_11030 PF08136 30S ribosomal protein subunit S22 family INQ46_11035 PF10684 Putative biofilm-dependent modulation protein INQ46_11040 PF02566 OsmC-like protein INQ46_11045 PF06109 Haemolysin E (HlyE) INQ46_11055 PF06411 HdeA/HdeB family INQ46_11065 PF00128 Alpha amylase, catalytic domain INQ46_11065 PF11941 Domain of unknown function (DUF3459) INQ46_11065 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) INQ46_11070 PF00128 Alpha amylase, catalytic domain INQ46_11075 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) INQ46_11075 PF00128 Alpha amylase, catalytic domain INQ46_11080 PF00155 Aminotransferase class I and II INQ46_11085 PF03553 Na+/H+ antiporter family INQ46_11090 PF00356 Bacterial regulatory proteins, lacI family INQ46_11200 PF02413 Caudovirales tail fibre assembly protein, lambda gpK INQ46_11235 PF17288 Terminase RNAseH like domain INQ46_11235 PF04466 Phage terminase large subunit INQ46_11330 PF00959 Phage lysozyme INQ46_11365 PF02547 Queuosine biosynthesis protein INQ46_11375 PF07690 Major Facilitator Superfamily INQ46_11385 PF07690 Major Facilitator Superfamily INQ46_11390 PF00107 Zinc-binding dehydrogenase INQ46_11390 PF08240 Alcohol dehydrogenase GroES-like domain INQ46_11395 PF00392 Bacterial regulatory proteins, gntR family INQ46_11395 PF07729 FCD domain INQ46_11405 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit INQ46_11405 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal INQ46_11410 PF00374 Nickel-dependent hydrogenase INQ46_11415 PF01292 Prokaryotic cytochrome b561 INQ46_11420 PF01750 Hydrogenase maturation protease INQ46_11425 PF01455 HupF/HypC family INQ46_11435 PF04809 HupH hydrogenase expression protein, C-terminal conserved region INQ46_11445 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA INQ46_11450 PF00267 Gram-negative porin INQ46_11460 PF01062 Bestrophin, RFP-TM, chloride channel INQ46_11465 PF13811 Domain of unknown function (DUF4186) INQ46_11470 PF04960 Glutaminase INQ46_11475 PF00171 Aldehyde dehydrogenase family INQ46_11480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ46_11480 PF03466 LysR substrate binding domain INQ46_11485 PF07690 Major Facilitator Superfamily INQ46_11490 PF01914 MarC family integral membrane protein INQ46_11495 PF01047 MarR family INQ46_11500 PF12833 Helix-turn-helix domain INQ46_11505 PF13999 MarB protein INQ46_11510 PF00892 EamA-like transporter family INQ46_11515 PF07690 Major Facilitator Superfamily INQ46_11525 PF04076 Bacterial OB fold (BOF) protein INQ46_11530 PF02464 Competence-damaged protein INQ46_11535 PF10685 Stress-induced bacterial acidophilic repeat motif INQ46_11540 PF01432 Peptidase family M3 INQ46_11545 PF00106 short chain dehydrogenase INQ46_11550 PF07729 FCD domain INQ46_11550 PF00392 Bacterial regulatory proteins, gntR family INQ46_11555 PF14001 YdfZ protein INQ46_11560 PF08125 Mannitol dehydrogenase C-terminal domain INQ46_11560 PF01232 Mannitol dehydrogenase Rossmann domain INQ46_11570 PF00107 Zinc-binding dehydrogenase INQ46_11570 PF08240 Alcohol dehydrogenase GroES-like domain INQ46_11575 PF13378 Enolase C-terminal domain-like INQ46_11575 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain INQ46_11580 PF02694 Uncharacterised BCR, YnfA/UPF0060 family INQ46_11585 PF06932 Protein of unknown function (DUF1283) INQ46_11590 PF13302 Acetyltransferase (GNAT) domain INQ46_11595 PF06788 Uncharacterised protein family (UPF0257) INQ46_11600 PF06649 Protein of unknown function (DUF1161) INQ46_11605 PF00384 Molybdopterin oxidoreductase INQ46_11605 PF04879 Molybdopterin oxidoreductase Fe4S4 domain INQ46_11605 PF01568 Molydopterin dinucleotide binding domain INQ46_11615 PF12800 4Fe-4S binding domain INQ46_11615 PF13247 4Fe-4S dicluster domain INQ46_11620 PF04976 DMSO reductase anchor subunit (DmsC) INQ46_11625 PF02613 Nitrate reductase delta subunit INQ46_11630 PF00528 Binding-protein-dependent transport system inner membrane component INQ46_11635 PF04069 Substrate binding domain of ABC-type glycine betaine transport system INQ46_11640 PF00528 Binding-protein-dependent transport system inner membrane component INQ46_11645 PF00005 ABC transporter INQ46_11645 PF00571 CBS domain INQ46_11650 PF00654 Voltage gated chloride channel INQ46_11660 PF00480 ROK family INQ46_11665 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ46_11665 PF03466 LysR substrate binding domain INQ46_11670 PF07690 Major Facilitator Superfamily INQ46_11680 PF00089 Trypsin INQ46_11685 PF00893 Small Multidrug Resistance protein INQ46_11690 PF00893 Small Multidrug Resistance protein INQ46_11695 PF01594 AI-2E family transporter INQ46_11700 PF02233 NAD(P) transhydrogenase beta subunit INQ46_11705 PF01262 Alanine dehydrogenase/PNT, C-terminal domain INQ46_11705 PF05222 Alanine dehydrogenase/PNT, N-terminal domain INQ46_11705 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch INQ46_11710 PF07338 Protein of unknown function (DUF1471) INQ46_11715 PF13520 Amino acid permease INQ46_11720 PF06942 GlpM protein INQ46_11725 PF00072 Response regulator receiver domain INQ46_11725 PF00486 Transcriptional regulatory protein, C terminal INQ46_11735 PF00267 Gram-negative porin INQ46_11740 PF13382 Adenine deaminase C-terminal domain INQ46_11740 PF01979 Amidohydrolase family INQ46_11750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase INQ46_11750 PF00512 His Kinase A (phospho-acceptor) domain INQ46_11750 PF00672 HAMP domain INQ46_11755 PF05472 DNA replication terminus site-binding protein (Ter protein) INQ46_11760 PF10415 Fumarase C C-terminus INQ46_11760 PF00206 Lyase INQ46_11765 PF05683 Fumarase C-terminus INQ46_11765 PF05681 Fumarate hydratase (Fumerase) INQ46_11770 PF01238 Phosphomannose isomerase type I INQ46_11775 PF06097 Bacterial protein of unknown function (DUF945) INQ46_11790 PF00962 Adenosine/AMP deaminase INQ46_11795 PF01408 Oxidoreductase family, NAD-binding Rossmann fold INQ46_11795 PF02894 Oxidoreductase family, C-terminal alpha/beta domain INQ46_11805 PF05321 Haemolysin expression modulating protein INQ46_11810 PF10754 Protein of unknown function (DUF2569) INQ46_11815 PF02508 Rnf-Nqr subunit, membrane protein INQ46_11820 PF04060 Putative Fe-S cluster INQ46_11825 PF10531 SLBB domain INQ46_11825 PF13375 RnfC Barrel sandwich hybrid domain INQ46_11825 PF12838 4Fe-4S dicluster domain INQ46_11825 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit INQ46_11830 PF03116 NQR2, RnfD, RnfE family INQ46_11835 PF04205 FMN-binding domain INQ46_11840 PF02508 Rnf-Nqr subunit, membrane protein INQ46_11845 PF10576 Iron-sulfur binding domain of endonuclease III INQ46_11845 PF00730 HhH-GPD superfamily base excision DNA repair protein INQ46_11845 PF00633 Helix-hairpin-helix motif INQ46_11850 PF00854 POT family INQ46_11855 PF02798 Glutathione S-transferase, N-terminal domain INQ46_11855 PF00043 Glutathione S-transferase, C-terminal domain INQ46_11860 PF08543 Phosphomethylpyrimidine kinase INQ46_11865 PF01479 S4 domain INQ46_11865 PF00579 tRNA synthetases class I (W and Y) INQ46_11870 PF01243 Pyridoxamine 5'-phosphate oxidase INQ46_11870 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region INQ46_11875 PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme INQ46_11880 PF03702 Anhydro-N-acetylmuramic acid kinase INQ46_11885 PF05433 Glycine zipper 2TM domain INQ46_11890 PF01047 MarR family INQ46_11895 PF07869 Protein of unknown function (DUF1656) INQ46_11900 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion INQ46_11900 PF00529 HlyD membrane-fusion protein of T1SS INQ46_11905 PF04632 Fusaric acid resistance protein family INQ46_11910 PF00080 Copper/zinc superoxide dismutase (SODC) INQ46_11915 PF00248 Aldo/keto reductase family INQ46_11920 PF06945 Protein of unknown function (DUF1289) INQ46_11925 PF16925 Tetracyclin repressor-like, C-terminal domain INQ46_11925 PF00440 Bacterial regulatory proteins, tetR family INQ46_11930 PF00724 NADH:flavin oxidoreductase / NADH oxidase family INQ46_11935 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily INQ46_11940 PF00929 Exonuclease INQ46_11945 PF00462 Glutaredoxin INQ46_11950 PF00877 NlpC/P60 family INQ46_11955 PF02777 Iron/manganese superoxide dismutases, C-terminal domain INQ46_11955 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain INQ46_11965 PF00356 Bacterial regulatory proteins, lacI family INQ46_11970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ46_11970 PF03466 LysR substrate binding domain INQ46_11975 PF07690 Major Facilitator Superfamily INQ46_11985 PF00677 Lumazine binding domain INQ46_11990 PF01554 MatE INQ46_12005 PF01312 FlhB HrpN YscU SpaS Family INQ46_12010 PF01311 Bacterial export proteins, family 1 INQ46_12015 PF01313 Bacterial export proteins, family 3 INQ46_12020 PF00813 FliP family INQ46_12025 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term INQ46_12040 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain INQ46_12040 PF18269 T3SS EscN ATPase C-terminal domain INQ46_12045 PF00771 FHIPEP family INQ46_12055 PF07201 HrpJ-like domain INQ46_12070 PF01514 Secretory protein of YscJ/FliF family INQ46_12110 PF05802 Enterobacterial EspB protein INQ46_12115 PF04888 Secretion system effector C (SseC) like family INQ46_12125 PF03433 EspA-like secreted protein INQ46_12145 PF00263 Bacterial type II and III secretion system protein INQ46_12145 PF03958 Bacterial type II/III secretion system short domain INQ46_12155 PF09456 RcsC Alpha-Beta-Loop (ABL) INQ46_12155 PF00512 His Kinase A (phospho-acceptor) domain INQ46_12155 PF00072 Response regulator receiver domain INQ46_12155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase INQ46_12160 PF00072 Response regulator receiver domain INQ46_12160 PF00196 Bacterial regulatory proteins, luxR family INQ46_12165 PF13411 MerR HTH family regulatory protein INQ46_12170 PF08349 Protein of unknown function (DUF1722) INQ46_12175 PF10965 Protein of unknown function (DUF2767) INQ46_12180 PF00072 Response regulator receiver domain INQ46_12180 PF00196 Bacterial regulatory proteins, luxR family INQ46_12185 PF00512 His Kinase A (phospho-acceptor) domain INQ46_12185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase INQ46_12190 PF13247 4Fe-4S dicluster domain INQ46_12195 PF03916 Polysulphide reductase, NrfD INQ46_12200 PF00384 Molybdopterin oxidoreductase INQ46_12200 PF04879 Molybdopterin oxidoreductase Fe4S4 domain INQ46_12200 PF01568 Molydopterin dinucleotide binding domain INQ46_12205 PF00294 pfkB family carbohydrate kinase INQ46_12215 PF00561 alpha/beta hydrolase fold INQ46_12225 PF02887 Pyruvate kinase, alpha/beta domain INQ46_12225 PF00224 Pyruvate kinase, barrel domain INQ46_12230 PF04728 Lipoprotein leucine-zipper INQ46_12235 PF04728 Lipoprotein leucine-zipper INQ46_12240 PF03734 L,D-transpeptidase catalytic domain INQ46_12240 PF17969 L,D-transpeptidase C-terminal domain INQ46_12240 PF01476 LysM domain INQ46_12245 PF02657 Fe-S metabolism associated domain INQ46_12250 PF00266 Aminotransferase class-V INQ46_12255 PF01458 Uncharacterized protein family (UPF0051) INQ46_12260 PF00005 ABC transporter INQ46_12265 PF01458 Uncharacterized protein family (UPF0051) INQ46_12270 PF01521 Iron-sulphur cluster biosynthesis INQ46_12275 PF00375 Sodium:dicarboxylate symporter family INQ46_12280 PF15930 Domain of unknown function INQ46_12285 PF03061 Thioesterase superfamily INQ46_12290 PF02913 FAD linked oxidases, C-terminal domain INQ46_12290 PF13183 4Fe-4S dicluster domain INQ46_12290 PF01565 FAD binding domain INQ46_12295 PF01594 AI-2E family transporter INQ46_12305 PF01487 Type I 3-dehydroquinase INQ46_12310 PF00391 PEP-utilising enzyme, mobile domain INQ46_12310 PF02896 PEP-utilising enzyme, TIM barrel domain INQ46_12310 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain INQ46_12315 PF03618 Kinase/pyrophosphorylase INQ46_12320 PF00793 DAHP synthetase I family INQ46_12325 PF10636 Hemin uptake protein hemP INQ46_12330 PF02696 Uncharacterized ACR, YdiU/UPF0061 family INQ46_12335 PF00563 EAL domain INQ46_12340 PF00877 NlpC/P60 family INQ46_12345 PF00005 ABC transporter INQ46_12350 PF00255 Glutathione peroxidase INQ46_12355 PF01032 FecCD transport family INQ46_12360 PF00216 Bacterial DNA-binding protein INQ46_12365 PF03484 tRNA synthetase B5 domain INQ46_12365 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain INQ46_12365 PF01588 Putative tRNA binding domain INQ46_12365 PF03147 Ferredoxin-fold anticodon binding domain INQ46_12365 PF03483 B3/4 domain INQ46_12370 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain INQ46_12370 PF01409 tRNA synthetases class II core domain (F) INQ46_12380 PF00453 Ribosomal protein L20 INQ46_12385 PF01632 Ribosomal protein L35 INQ46_12390 PF00707 Translation initiation factor IF-3, C-terminal domain INQ46_12390 PF05198 Translation initiation factor IF-3, N-terminal domain INQ46_12395 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain INQ46_12395 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) INQ46_12395 PF02824 TGS domain INQ46_12395 PF03129 Anticodon binding domain INQ46_12425 PF01223 DNA/RNA non-specific endonuclease INQ46_12440 PF04338 Protein of unknown function, DUF481 INQ46_12445 PF00294 pfkB family carbohydrate kinase INQ46_12450 PF11080 Endoribonuclease GhoS INQ46_12455 PF03881 Fructosamine kinase INQ46_12460 PF14002 YniB-like protein INQ46_12465 PF13419 Haloacid dehalogenase-like hydrolase INQ46_12470 PF04307 LexA-binding, inner membrane-associated putative hydrolase INQ46_12475 PF00375 Sodium:dicarboxylate symporter family INQ46_12480 PF10729 Cell division activator CedA INQ46_12485 PF06628 Catalase-related immune-responsive INQ46_12485 PF18011 C-terminal domain found in long catalases INQ46_12485 PF00199 Catalase INQ46_12490 PF04794 YdjC-like protein INQ46_12495 PF11975 Family 4 glycosyl hydrolase C-terminal domain INQ46_12495 PF02056 Family 4 glycosyl hydrolase INQ46_12500 PF12833 Helix-turn-helix domain INQ46_12500 PF07883 Cupin domain INQ46_12505 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit INQ46_12510 PF02378 Phosphotransferase system, EIIC INQ46_12515 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit INQ46_12520 PF04355 SmpA / OmlA family INQ46_12525 PF02540 NAD synthase INQ46_12535 PF07813 LTXXQ motif family protein INQ46_12540 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family INQ46_12545 PF04996 Succinylarginine dihydrolase INQ46_12550 PF00171 Aldehyde dehydrogenase family INQ46_12555 PF04958 Arginine N-succinyltransferase beta subunit INQ46_12560 PF00202 Aminotransferase class-III INQ46_12565 PF03372 Endonuclease/Exonuclease/phosphatase family INQ46_12570 PF00293 NUDIX domain INQ46_12575 PF07383 Protein of unknown function (DUF1496) INQ46_12580 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain INQ46_12580 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase INQ46_12585 PF01131 DNA topoisomerase INQ46_12585 PF01751 Toprim domain INQ46_12590 PF02769 AIR synthase related protein, C-terminal domain INQ46_12590 PF00586 AIR synthase related protein, N-terminal domain INQ46_12595 PF00881 Nitroreductase family INQ46_12600 PF01343 Peptidase family S49 INQ46_12605 PF00710 Asparaginase, N-terminal INQ46_12605 PF17763 Glutaminase/Asparaginase C-terminal domain INQ46_12610 PF00857 Isochorismatase family INQ46_12615 PF07023 Protein of unknown function (DUF1315) INQ46_12620 PF01641 SelR domain INQ46_12625 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain INQ46_12625 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain INQ46_12630 PF01263 Aldose 1-epimerase INQ46_12635 PF00248 Aldo/keto reductase family INQ46_12640 PF13186 Iron-sulfur cluster-binding domain INQ46_12640 PF04055 Radical SAM superfamily INQ46_12645 PF06629 MltA-interacting protein MipA INQ46_12650 PF08298 PrkA AAA domain INQ46_12650 PF06798 PrkA serine protein kinase C-terminal domain INQ46_12655 PF04285 Protein of unknown function (DUF444) INQ46_12660 PF17155 Gammaproteobacterial periplasmic sensor domain INQ46_12660 PF00990 Diguanylate cyclase, GGDEF domain INQ46_12665 PF04073 Aminoacyl-tRNA editing domain INQ46_12675 PF04284 Protein of unknown function (DUF441) INQ46_12680 PF12833 Helix-turn-helix domain INQ46_12680 PF02311 AraC-like ligand binding domain INQ46_12685 PF07690 Major Facilitator Superfamily INQ46_12690 PF04343 Protein of unknown function, DUF488 INQ46_12700 PF03891 Domain of unknown function (DUF333) INQ46_12710 PF04226 Transglycosylase associated protein INQ46_12720 PF08956 Domain of unknown function (DUF1869) INQ46_12725 PF09313 Domain of unknown function (DUF1971) INQ46_12730 PF01810 LysE type translocator INQ46_12735 PF01817 Chorismate mutase type II INQ46_12750 PF00376 MerR family regulatory protein INQ46_12750 PF09278 MerR, DNA binding INQ46_12760 PF13427 Domain of unknown function (DUF4111) INQ46_12760 PF01909 Nucleotidyltransferase domain INQ46_12765 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment INQ46_12780 PF00924 Mechanosensitive ion channel INQ46_12785 PF00005 ABC transporter INQ46_12790 PF00005 ABC transporter INQ46_12795 PF12911 N-terminal TM domain of oligopeptide transport permease C INQ46_12795 PF00528 Binding-protein-dependent transport system inner membrane component INQ46_12800 PF00528 Binding-protein-dependent transport system inner membrane component INQ46_12805 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle INQ46_12820 PF01292 Prokaryotic cytochrome b561 INQ46_12830 PF00011 Hsp20/alpha crystallin family INQ46_12860 PF06316 Enterobacterial Ail/Lom protein INQ46_12870 PF00313 'Cold-shock' DNA-binding domain INQ46_12875 PF00652 Ricin-type beta-trefoil lectin domain INQ46_12880 PF06183 DinI-like family INQ46_12895 PF03372 Endonuclease/Exonuclease/phosphatase family INQ46_12920 PF02586 SOS response associated peptidase (SRAP) INQ46_12930 PF14496 C-terminal novel E3 ligase, LRR-interacting INQ46_12930 PF12468 Type III secretion system leucine rich repeat protein INQ46_12955 PF03335 Phage tail fibre repeat INQ46_12955 PF07484 Phage Tail Collar Domain INQ46_12955 PF08400 Prophage tail fibre N-terminal INQ46_12955 PF07484 Phage Tail Collar Domain INQ46_12955 PF03335 Phage tail fibre repeat INQ46_12955 PF08400 Prophage tail fibre N-terminal INQ46_12990 PF03589 Antitermination protein INQ46_12995 PF05869 DNA N-6-adenine-methyltransferase (Dam) INQ46_13000 PF06069 PerC transcriptional activator INQ46_13025 PF10549 ORF11CD3 domain INQ46_13025 PF09669 Phage regulatory protein Rha (Phage_pRha) INQ46_13065 PF10065 Uncharacterized conserved protein (DUF2303) INQ46_13080 PF09003 Bacteriophage lambda integrase, Arm DNA-binding domain INQ46_13080 PF00589 Phage integrase family INQ46_13085 PF00180 Isocitrate/isopropylmalate dehydrogenase INQ46_13090 PF00849 RNA pseudouridylate synthase INQ46_13100 PF00293 NUDIX domain INQ46_13110 PF04356 Protein of unknown function (DUF489) INQ46_13115 PF08328 Adenylosuccinate lyase C-terminal INQ46_13115 PF00206 Lyase INQ46_13120 PF00486 Transcriptional regulatory protein, C terminal INQ46_13120 PF00072 Response regulator receiver domain INQ46_13125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase INQ46_13125 PF08918 PhoQ Sensor INQ46_13130 PF08007 Cupin superfamily protein INQ46_13140 PF01546 Peptidase family M20/M25/M40 INQ46_13140 PF07687 Peptidase dimerisation domain INQ46_13145 PF08402 TOBE domain INQ46_13145 PF00005 ABC transporter INQ46_13150 PF00528 Binding-protein-dependent transport system inner membrane component INQ46_13155 PF06767 Sif protein INQ46_13160 PF00528 Binding-protein-dependent transport system inner membrane component INQ46_13165 PF13416 Bacterial extracellular solute-binding protein INQ46_13170 PF02146 Sir2 family INQ46_13175 PF00480 ROK family INQ46_13180 PF12704 MacB-like periplasmic core domain INQ46_13180 PF02687 FtsX-like permease family INQ46_13185 PF00005 ABC transporter INQ46_13190 PF02687 FtsX-like permease family INQ46_13190 PF12704 MacB-like periplasmic core domain INQ46_13195 PF00271 Helicase conserved C-terminal domain INQ46_13195 PF00270 DEAD/DEAH box helicase INQ46_13195 PF02559 CarD-like/TRCF domain INQ46_13195 PF17757 UvrB interaction domain INQ46_13195 PF03461 TRCF domain INQ46_13200 PF01476 LysM domain INQ46_13200 PF17969 L,D-transpeptidase C-terminal domain INQ46_13200 PF03734 L,D-transpeptidase catalytic domain INQ46_13205 PF07338 Protein of unknown function (DUF1471) INQ46_13210 PF00440 Bacterial regulatory proteins, tetR family INQ46_13215 PF05433 Glycine zipper 2TM domain INQ46_13220 PF07992 Pyridine nucleotide-disulphide oxidoreductase INQ46_13225 PF05728 Uncharacterised protein family (UPF0227) INQ46_13230 PF00933 Glycosyl hydrolase family 3 N terminal domain INQ46_13235 PF01636 Phosphotransferase enzyme family INQ46_13240 PF13036 Peptidoglycan-synthase activator LpoB INQ46_13245 PF07233 Protein of unknown function (DUF1425) INQ46_13250 PF01230 HIT domain INQ46_13255 PF07715 TonB-dependent Receptor Plug Domain INQ46_13255 PF00593 TonB dependent receptor INQ46_13260 PF02378 Phosphotransferase system, EIIC INQ46_13260 PF00367 phosphotransferase system, EIIB INQ46_13265 PF01026 TatD related DNase INQ46_13270 PF09115 DNA polymerase III, delta subunit, C terminal INQ46_13275 PF02223 Thymidylate kinase INQ46_13280 PF02618 YceG-like family INQ46_13285 PF01063 Amino-transferase class IV INQ46_13290 PF00109 Beta-ketoacyl synthase, N-terminal domain INQ46_13290 PF02801 Beta-ketoacyl synthase, C-terminal domain INQ46_13295 PF00550 Phosphopantetheine attachment site INQ46_13305 PF00698 Acyl transferase domain INQ46_13310 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III INQ46_13310 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal INQ46_13315 PF02504 Fatty acid synthesis protein INQ46_13320 PF01783 Ribosomal L32p protein family INQ46_13325 PF02620 Large ribosomal RNA subunit accumulation protein YceD INQ46_13330 PF02545 Maf-like protein INQ46_13345 PF00849 RNA pseudouridylate synthase INQ46_13345 PF01479 S4 domain INQ46_13350 PF00575 S1 RNA binding domain INQ46_13350 PF12111 Polyribonucleotide phosphorylase C terminal INQ46_13350 PF10150 Ribonuclease E/G family INQ46_13355 PF00669 Bacterial flagellin N-terminal helical region INQ46_13360 PF06429 Flagellar basal body rod FlgEFG protein C-terminal INQ46_13360 PF00460 Flagella basal body rod protein INQ46_13365 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase INQ46_13365 PF10135 Rod binding protein INQ46_13370 PF02119 Flagellar P-ring protein INQ46_13375 PF02107 Flagellar L-ring protein INQ46_13380 PF00460 Flagella basal body rod protein INQ46_13380 PF06429 Flagellar basal body rod FlgEFG protein C-terminal INQ46_13385 PF06429 Flagellar basal body rod FlgEFG protein C-terminal INQ46_13385 PF00460 Flagella basal body rod protein INQ46_13390 PF00460 Flagella basal body rod protein INQ46_13390 PF07559 Flagellar basal body protein FlaE INQ46_13390 PF06429 Flagellar basal body rod FlgEFG protein C-terminal INQ46_13395 PF03963 Flagellar hook capping protein - N-terminal region INQ46_13395 PF13860 FlgD Ig-like domain INQ46_13395 PF13861 FlgD Tudor-like domain INQ46_13400 PF06429 Flagellar basal body rod FlgEFG protein C-terminal INQ46_13400 PF00460 Flagella basal body rod protein INQ46_13405 PF00460 Flagella basal body rod protein INQ46_13410 PF13144 Chaperone for flagella basal body P-ring formation INQ46_13415 PF04316 Anti-sigma-28 factor, FlgM INQ46_13420 PF05130 FlgN protein INQ46_13425 PF03023 Lipid II flippase MurJ INQ46_13430 PF01408 Oxidoreductase family, NAD-binding Rossmann fold INQ46_13435 PF04337 Protein of unknown function, DUF480 INQ46_13440 PF13302 Acetyltransferase (GNAT) domain INQ46_13445 PF07690 Major Facilitator Superfamily INQ46_13450 PF13417 Glutathione S-transferase, N-terminal domain INQ46_13450 PF04399 Glutaredoxin 2, C terminal domain INQ46_13455 PF07273 Protein of unknown function (DUF1439) INQ46_13460 PF01979 Amidohydrolase family INQ46_13465 PF06183 DinI-like family INQ46_13470 PF13991 BssS protein family INQ46_13475 PF01266 FAD dependent oxidoreductase INQ46_13480 PF10968 Protein of unknown function (DUF2770) INQ46_13485 PF01292 Prokaryotic cytochrome b561 INQ46_13490 PF04264 YceI-like domain INQ46_13495 PF00581 Rhodanese-like domain INQ46_13495 PF17773 UPF0176 acylphosphatase like domain INQ46_13495 PF12368 Rhodanase C-terminal INQ46_13500 PF03279 Bacterial lipid A biosynthesis acyltransferase INQ46_13510 PF13984 MsyB protein INQ46_13515 PF07119 Protein of unknown function (DUF1375) INQ46_13520 PF00535 Glycosyl transferase family 2 INQ46_13525 PF04349 Periplasmic glucan biosynthesis protein, MdoG INQ46_13530 PF01757 Acyltransferase family INQ46_13535 PF13091 PLD-like domain INQ46_13540 PF01661 Macro domain INQ46_13550 PF10610 Thin aggregative fimbriae synthesis protein INQ46_13555 PF07012 Curlin associated repeat INQ46_13560 PF07012 Curlin associated repeat INQ46_13565 PF00196 Bacterial regulatory proteins, luxR family INQ46_13570 PF10627 Curli assembly protein CsgE INQ46_13575 PF10614 Type VIII secretion system (T8SS), CsgF protein INQ46_13580 PF03783 Curli production assembly/transport component CsgG INQ46_13585 PF06496 Protein of unknown function (DUF1097) INQ46_13590 PF02613 Nitrate reductase delta subunit INQ46_13595 PF02811 PHP domain INQ46_13600 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain INQ46_13610 PF02894 Oxidoreductase family, C-terminal alpha/beta domain INQ46_13610 PF01408 Oxidoreductase family, NAD-binding Rossmann fold INQ46_13615 PF07690 Major Facilitator Superfamily INQ46_13620 PF06178 Oligogalacturonate-specific porin protein (KdgM) INQ46_13625 PF01344 Kelch motif INQ46_13630 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase INQ46_13645 PF01380 SIS domain INQ46_13645 PF01418 Helix-turn-helix domain, rpiR family INQ46_13650 PF02562 PhoH-like protein INQ46_13655 PF00474 Sodium:solute symporter family INQ46_13660 PF14850 DNA-binding domain of Proline dehydrogenase INQ46_13660 PF01619 Proline dehydrogenase INQ46_13660 PF18327 Proline utilization A proline dehydrogenase N-terminal domain INQ46_13660 PF00171 Aldehyde dehydrogenase family INQ46_13670 PF00440 Bacterial regulatory proteins, tetR family INQ46_13670 PF08362 YcdC-like protein, C-terminal region INQ46_13675 PF10685 Stress-induced bacterial acidophilic repeat motif INQ46_13680 PF03358 NADPH-dependent FMN reductase INQ46_13685 PF13993 YccJ-like protein INQ46_13690 PF00328 Histidine phosphatase superfamily (branch 2) INQ46_13695 PF00578 AhpC/TSA family INQ46_13700 PF06965 Na+/H+ antiporter 1 INQ46_13700 PF13462 Thioredoxin INQ46_13705 PF13098 Thioredoxin-like domain INQ46_13705 PF02683 Cytochrome C biogenesis protein transmembrane region INQ46_13705 PF11412 Disulphide bond corrector protein DsbC INQ46_13715 PF00226 DnaJ domain INQ46_13715 PF01556 DnaJ C terminal domain INQ46_13730 PF12706 Beta-lactamase superfamily domain INQ46_13740 PF07690 Major Facilitator Superfamily INQ46_13745 PF03328 HpcH/HpaI aldolase/citrate lyase family INQ46_13750 PF01557 Fumarylacetoacetate (FAA) hydrolase family INQ46_13755 PF02962 5-carboxymethyl-2-hydroxymuconate isomerase INQ46_13760 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase INQ46_13765 PF00171 Aldehyde dehydrogenase family INQ46_13770 PF01557 Fumarylacetoacetate (FAA) hydrolase family INQ46_13775 PF01047 MarR family INQ46_13780 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal INQ46_13780 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal INQ46_13785 PF01613 Flavin reductase like domain INQ46_13790 PF00576 HIUase/Transthyretin family INQ46_13795 PF00072 Response regulator receiver domain INQ46_13795 PF00486 Transcriptional regulatory protein, C terminal INQ46_13800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase INQ46_13800 PF00512 His Kinase A (phospho-acceptor) domain INQ46_13805 PF03577 Peptidase family C69 INQ46_13815 PF13132 Domain of unknown function (DUF3950) INQ46_13820 PF05925 Enterobacterial virulence protein IpgD INQ46_13830 PF07824 Type III secretion chaperone domain INQ46_13850 PF00805 Pentapeptide repeats (8 copies) INQ46_13880 PF01554 MatE INQ46_13890 PF03734 L,D-transpeptidase catalytic domain INQ46_13890 PF17969 L,D-transpeptidase C-terminal domain INQ46_13895 PF02277 Phosphoribosyltransferase INQ46_13900 PF02654 Cobalamin-5-phosphate synthase INQ46_13905 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase INQ46_13910 PF07685 CobB/CobQ-like glutamine amidotransferase domain INQ46_13915 PF00005 ABC transporter INQ46_13920 PF02361 Cobalt transport protein INQ46_13925 PF02553 Cobalt transport protein component CbiN INQ46_13930 PF01891 Cobalt uptake substrate-specific transmembrane region INQ46_13935 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases INQ46_13940 PF06180 Cobalt chelatase (CbiK) INQ46_13945 PF02571 Precorrin-6x reductase CbiJ/CobK INQ46_13950 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases INQ46_13955 PF11760 Cobalamin synthesis G N-terminal INQ46_13955 PF11761 Cobalamin biosynthesis central region INQ46_13955 PF01890 Cobalamin synthesis G C-terminus INQ46_13960 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases INQ46_13965 PF05175 Methyltransferase small domain INQ46_13970 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases INQ46_13975 PF01888 CbiD INQ46_13980 PF02570 Precorrin-8X methylmutase INQ46_13985 PF03186 CobD/Cbib protein INQ46_13990 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain INQ46_13990 PF07685 CobB/CobQ-like glutamine amidotransferase domain INQ46_13995 PF12833 Helix-turn-helix domain INQ46_13995 PF10114 Sensory domain found in PocR INQ46_14000 PF00230 Major intrinsic protein INQ46_14005 PF00936 BMC domain INQ46_14010 PF00936 BMC domain INQ46_14015 PF02286 Dehydratase large subunit INQ46_14020 PF02288 Dehydratase medium subunit INQ46_14025 PF02287 Dehydratase small subunit INQ46_14030 PF08841 Diol dehydratase reactivase ATPase-like domain INQ46_14030 PF18427 DD-reactivating factor swiveling domain INQ46_14040 PF00936 BMC domain INQ46_14045 PF00936 BMC domain INQ46_14050 PF06130 Phosphate propanoyltransferase INQ46_14060 PF03319 Ethanolamine utilisation protein EutN/carboxysome INQ46_14065 PF01923 Cobalamin adenosyltransferase INQ46_14070 PF00171 Aldehyde dehydrogenase family INQ46_14075 PF00465 Iron-containing alcohol dehydrogenase INQ46_14075 PF00171 Aldehyde dehydrogenase family INQ46_14080 PF13237 4Fe-4S dicluster domain INQ46_14080 PF10531 SLBB domain INQ46_14080 PF13375 RnfC Barrel sandwich hybrid domain INQ46_14080 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit INQ46_14090 PF00936 BMC domain INQ46_14095 PF10662 Ethanolamine utilisation - propanediol utilisation INQ46_14100 PF00871 Acetokinase family INQ46_14105 PF00288 GHMP kinases N terminal domain INQ46_14110 PF04363 Protein of unknown function (DUF496) INQ46_14115 PF04632 Fusaric acid resistance protein family INQ46_14120 PF06445 GyrI-like small molecule binding domain INQ46_14125 PF00768 D-alanyl-D-alanine carboxypeptidase INQ46_14125 PF07943 Penicillin-binding protein 5, C-terminal domain INQ46_14130 PF01292 Prokaryotic cytochrome b561 INQ46_14135 PF12800 4Fe-4S binding domain INQ46_14135 PF13247 4Fe-4S dicluster domain INQ46_14140 PF01568 Molydopterin dinucleotide binding domain INQ46_14140 PF04879 Molybdopterin oxidoreductase Fe4S4 domain INQ46_14140 PF00384 Molybdopterin oxidoreductase INQ46_14155 PF08411 Exonuclease C-terminal INQ46_14155 PF00929 Exonuclease INQ46_14160 PF13520 Amino acid permease INQ46_14170 PF03466 LysR substrate binding domain INQ46_14170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ46_14175 PF01370 NAD dependent epimerase/dehydratase family INQ46_14185 PF01634 ATP phosphoribosyltransferase INQ46_14185 PF08029 HisG, C-terminal domain INQ46_14190 PF00815 Histidinol dehydrogenase INQ46_14195 PF00155 Aminotransferase class I and II INQ46_14200 PF00475 Imidazoleglycerol-phosphate dehydratase INQ46_14205 PF00117 Glutamine amidotransferase class-I INQ46_14210 PF00977 Histidine biosynthesis protein INQ46_14215 PF00977 Histidine biosynthesis protein INQ46_14220 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase INQ46_14220 PF01502 Phosphoribosyl-AMP cyclohydrolase INQ46_14225 PF02706 Chain length determinant protein INQ46_14230 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain INQ46_14230 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain INQ46_14235 PF01797 Transposase IS200 like INQ46_14255 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase INQ46_14255 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain INQ46_14260 PF02397 Bacterial sugar transferase INQ46_14265 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I INQ46_14265 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II INQ46_14265 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III INQ46_14265 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain INQ46_14270 PF01050 Mannose-6-phosphate isomerase INQ46_14270 PF00483 Nucleotidyl transferase INQ46_14275 PF00535 Glycosyl transferase family 2 INQ46_14280 PF13439 Glycosyltransferase Family 4 INQ46_14280 PF00534 Glycosyl transferases group 1 INQ46_14285 PF00535 Glycosyl transferase family 2 INQ46_14295 PF16363 GDP-mannose 4,6 dehydratase INQ46_14300 PF01370 NAD dependent epimerase/dehydratase family INQ46_14305 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family INQ46_14310 PF16363 GDP-mannose 4,6 dehydratase INQ46_14315 PF00483 Nucleotidyl transferase INQ46_14320 PF00970 Oxidoreductase FAD-binding domain INQ46_14320 PF00111 2Fe-2S iron-sulfur cluster binding domain INQ46_14320 PF00175 Oxidoreductase NAD-binding domain INQ46_14325 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase INQ46_14330 PF00483 Nucleotidyl transferase INQ46_14335 PF04321 RmlD substrate binding domain INQ46_14340 PF16363 GDP-mannose 4,6 dehydratase INQ46_14345 PF00483 Nucleotidyl transferase INQ46_14355 PF00534 Glycosyl transferases group 1 INQ46_14355 PF13439 Glycosyltransferase Family 4 INQ46_14360 PF04230 Polysaccharide pyruvyl transferase INQ46_14370 PF02397 Bacterial sugar transferase INQ46_14375 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain INQ46_14375 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I INQ46_14375 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III INQ46_14375 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II INQ46_14380 PF00483 Nucleotidyl transferase INQ46_14380 PF01050 Mannose-6-phosphate isomerase INQ46_14385 PF00534 Glycosyl transferases group 1 INQ46_14385 PF13579 Glycosyl transferase 4-like domain INQ46_14390 PF00293 NUDIX domain INQ46_14395 PF01370 NAD dependent epimerase/dehydratase family INQ46_14400 PF16363 GDP-mannose 4,6 dehydratase INQ46_14405 PF00132 Bacterial transferase hexapeptide (six repeats) INQ46_14410 PF00535 Glycosyl transferase family 2 INQ46_14420 PF00534 Glycosyl transferases group 1 INQ46_14420 PF13439 Glycosyltransferase Family 4 INQ46_14425 PF00132 Bacterial transferase hexapeptide (six repeats) INQ46_14430 PF00535 Glycosyl transferase family 2 INQ46_14435 PF13614 AAA domain INQ46_14435 PF13807 G-rich domain on putative tyrosine kinase INQ46_14435 PF02706 Chain length determinant protein INQ46_14440 PF01451 Low molecular weight phosphotyrosine protein phosphatase INQ46_14445 PF02563 Polysaccharide biosynthesis/export protein INQ46_14445 PF10531 SLBB domain INQ46_14445 PF18412 Outer-membrane lipoprotein Wza C-terminal domain INQ46_14450 PF03741 Integral membrane protein TerC family INQ46_14450 PF03471 Transporter associated domain INQ46_14450 PF00571 CBS domain INQ46_14455 PF05170 AsmA family INQ46_14460 PF00692 dUTPase INQ46_14465 PF00485 Phosphoribulokinase / Uridine kinase family INQ46_14470 PF00563 EAL domain INQ46_14470 PF00990 Diguanylate cyclase, GGDEF domain INQ46_14470 PF05231 MASE1 INQ46_14470 PF08447 PAS fold INQ46_14470 PF08448 PAS fold INQ46_14470 PF13426 PAS domain INQ46_14475 PF06029 AlkA N-terminal domain INQ46_14475 PF00730 HhH-GPD superfamily base excision DNA repair protein INQ46_14480 PF00012 Hsp70 protein INQ46_14490 PF13533 Biotin-lipoyl like INQ46_14495 PF00873 AcrB/AcrD/AcrF family INQ46_14500 PF00873 AcrB/AcrD/AcrF family INQ46_14505 PF07690 Major Facilitator Superfamily INQ46_14510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase INQ46_14510 PF00512 His Kinase A (phospho-acceptor) domain INQ46_14510 PF00672 HAMP domain INQ46_14515 PF00486 Transcriptional regulatory protein, C terminal INQ46_14515 PF00072 Response regulator receiver domain INQ46_14535 PF16325 Peptidase family U32 C-terminal domain INQ46_14535 PF01136 Peptidase family U32 INQ46_14555 PF00781 Diacylglycerol kinase catalytic domain INQ46_14560 PF01791 DeoC/LacD family aldolase INQ46_14565 PF03825 Nucleoside H+ symporter INQ46_14570 PF03747 ADP-ribosylglycohydrolase INQ46_14575 PF00294 pfkB family carbohydrate kinase INQ46_14580 PF07702 UTRA domain INQ46_14580 PF00392 Bacterial regulatory proteins, gntR family INQ46_14585 PF08543 Phosphomethylpyrimidine kinase INQ46_14590 PF02110 Hydroxyethylthiazole kinase family INQ46_14595 PF11776 Nickel/cobalt transporter regulator INQ46_14605 PF13954 PapC N-terminal domain INQ46_14605 PF13953 PapC C-terminal domain INQ46_14605 PF00577 Outer membrane usher protein INQ46_14610 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain INQ46_14610 PF02753 Pili assembly chaperone PapD, C-terminal domain INQ46_14625 PF10609 NUBPL iron-transfer P-loop NTPase INQ46_14630 PF09334 tRNA synthetases class I (M) INQ46_14630 PF01588 Putative tRNA binding domain INQ46_14635 PF06998 Protein of unknown function (DUF1307) INQ46_14645 PF07308 Protein of unknown function (DUF1456) INQ46_14650 PF00072 Response regulator receiver domain INQ46_14650 PF04397 LytTr DNA-binding domain INQ46_14655 PF07694 5TMR of 5TMR-LYT INQ46_14655 PF06580 Histidine kinase INQ46_14660 PF13411 MerR HTH family regulatory protein INQ46_14670 PF00528 Binding-protein-dependent transport system inner membrane component INQ46_14675 PF00005 ABC transporter INQ46_14680 PF00528 Binding-protein-dependent transport system inner membrane component INQ46_14685 PF04069 Substrate binding domain of ABC-type glycine betaine transport system INQ46_14690 PF14310 Fibronectin type III-like domain INQ46_14690 PF00933 Glycosyl hydrolase family 3 N terminal domain INQ46_14690 PF01915 Glycosyl hydrolase family 3 C-terminal domain INQ46_14695 PF01565 FAD binding domain INQ46_14695 PF09330 D-lactate dehydrogenase, membrane binding INQ46_14700 PF00768 D-alanyl-D-alanine carboxypeptidase INQ46_14705 PF04893 Yip1 domain INQ46_14710 PF09335 SNARE associated Golgi protein INQ46_14720 PF02321 Outer membrane efflux protein INQ46_14730 PF01207 Dihydrouridine synthase (Dus) INQ46_14735 PF01494 FAD binding domain INQ46_14740 PF14497 Glutathione S-transferase, C-terminal domain INQ46_14740 PF02798 Glutathione S-transferase, N-terminal domain INQ46_14745 PF01557 Fumarylacetoacetate (FAA) hydrolase family INQ46_14750 PF07883 Cupin domain INQ46_14755 PF07690 Major Facilitator Superfamily INQ46_14760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ46_14760 PF03466 LysR substrate binding domain INQ46_14765 PF03788 LrgA family INQ46_14770 PF04172 LrgB-like family INQ46_14775 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region INQ46_14775 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region INQ46_14785 PF02698 DUF218 domain INQ46_14790 PF10808 Protein of unknown function (DUF2542) INQ46_14795 PF07992 Pyridine nucleotide-disulphide oxidoreductase INQ46_14795 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster INQ46_14800 PF01180 Dihydroorotate dehydrogenase INQ46_14805 PF02653 Branched-chain amino acid transport system / permease component INQ46_14810 PF00005 ABC transporter INQ46_14815 PF13407 Periplasmic binding protein domain INQ46_14820 PF00356 Bacterial regulatory proteins, lacI family INQ46_14825 PF04235 Protein of unknown function (DUF418) INQ46_14830 PF01227 GTP cyclohydrolase I INQ46_14835 PF00756 Putative esterase INQ46_14845 PF03313 Serine dehydratase alpha chain INQ46_14845 PF03315 Serine dehydratase beta chain INQ46_14850 PF18429 Domain of unknown function (DUF5609) INQ46_14855 PF07690 Major Facilitator Superfamily INQ46_14860 PF07715 TonB-dependent Receptor Plug Domain INQ46_14860 PF00593 TonB dependent receptor INQ46_14865 PF00324 Amino acid permease INQ46_14870 PF03466 LysR substrate binding domain INQ46_14870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ46_14875 PF03601 Conserved hypothetical protein 698 INQ46_14880 PF01261 Xylose isomerase-like TIM barrel INQ46_14885 PF02378 Phosphotransferase system, EIIC INQ46_14885 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit INQ46_14890 PF00294 pfkB family carbohydrate kinase INQ46_14895 PF00381 PTS HPr component phosphorylation site INQ46_14895 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 INQ46_14900 PF07690 Major Facilitator Superfamily INQ46_14915 PF03692 Putative zinc- or iron-chelating domain INQ46_14920 PF08207 Elongation factor P (EF-P) KOW-like domain INQ46_14920 PF09285 Elongation factor P, C-terminal INQ46_14920 PF01132 Elongation factor P (EF-P) OB domain INQ46_14925 PF02492 CobW/HypB/UreG, nucleotide-binding domain INQ46_14925 PF07683 Cobalamin synthesis protein cobW C-terminal domain INQ46_14930 PF01569 PAP2 superfamily INQ46_14935 PF00877 NlpC/P60 family INQ46_14940 PF12792 CSS motif domain associated with EAL INQ46_14940 PF00563 EAL domain INQ46_14945 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle INQ46_14950 PF00528 Binding-protein-dependent transport system inner membrane component INQ46_14955 PF12911 N-terminal TM domain of oligopeptide transport permease C INQ46_14955 PF00528 Binding-protein-dependent transport system inner membrane component INQ46_14960 PF00005 ABC transporter INQ46_14960 PF08352 Oligopeptide/dipeptide transporter, C-terminal region INQ46_14965 PF13989 YejG-like protein INQ46_14970 PF07690 Major Facilitator Superfamily INQ46_14975 PF01479 S4 domain INQ46_14975 PF00849 RNA pseudouridylate synthase INQ46_14980 PF00271 Helicase conserved C-terminal domain INQ46_14980 PF04851 Type III restriction enzyme, res subunit INQ46_14985 PF01386 Ribosomal L25p family INQ46_14990 PF04245 37-kD nucleoid-associated bacterial protein INQ46_14995 PF07208 Protein of unknown function (DUF1414) INQ46_15000 PF00884 Sulfatase INQ46_15000 PF11893 Domain of unknown function (DUF3413) INQ46_15015 PF14496 C-terminal novel E3 ligase, LRR-interacting INQ46_15015 PF12468 Type III secretion system leucine rich repeat protein INQ46_15030 PF02413 Caudovirales tail fibre assembly protein, lambda gpK INQ46_15035 PF08400 Prophage tail fibre N-terminal INQ46_15035 PF03335 Phage tail fibre repeat INQ46_15035 PF07484 Phage Tail Collar Domain INQ46_15055 PF00072 Response regulator receiver domain INQ46_15055 PF00196 Bacterial regulatory proteins, luxR family INQ46_15060 PF03918 Cytochrome C biogenesis protein INQ46_15065 PF08534 Redoxin INQ46_15070 PF01578 Cytochrome C assembly protein INQ46_15070 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal INQ46_15075 PF03100 CcmE INQ46_15080 PF04995 Heme exporter protein D (CcmD) INQ46_15085 PF01578 Cytochrome C assembly protein INQ46_15090 PF03379 CcmB protein INQ46_15095 PF00005 ABC transporter INQ46_15100 PF03264 NapC/NirT cytochrome c family, N-terminal region INQ46_15105 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) INQ46_15110 PF13237 4Fe-4S dicluster domain INQ46_15110 PF12801 4Fe-4S binding domain INQ46_15115 PF12838 4Fe-4S dicluster domain INQ46_15115 PF12800 4Fe-4S binding domain INQ46_15120 PF04879 Molybdopterin oxidoreductase Fe4S4 domain INQ46_15120 PF00384 Molybdopterin oxidoreductase INQ46_15120 PF01568 Molydopterin dinucleotide binding domain INQ46_15125 PF03927 NapD protein INQ46_15130 PF13187 4Fe-4S dicluster domain INQ46_15130 PF12800 4Fe-4S binding domain INQ46_15130 PF00037 4Fe-4S binding domain INQ46_15135 PF03974 Ecotin INQ46_15140 PF00005 ABC transporter INQ46_15145 PF13532 2OG-Fe(II) oxygenase superfamily INQ46_15150 PF12833 Helix-turn-helix domain INQ46_15150 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain INQ46_15150 PF02805 Metal binding domain of Ada INQ46_15150 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain INQ46_15155 PF02424 ApbE family INQ46_15160 PF00267 Gram-negative porin INQ46_15165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase INQ46_15165 PF01627 Hpt domain INQ46_15165 PF16359 RcsD-ABL domain INQ46_15170 PF00072 Response regulator receiver domain INQ46_15170 PF00196 Bacterial regulatory proteins, luxR family INQ46_15175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase INQ46_15175 PF00512 His Kinase A (phospho-acceptor) domain INQ46_15175 PF09456 RcsC Alpha-Beta-Loop (ABL) INQ46_15175 PF00072 Response regulator receiver domain INQ46_15180 PF03989 DNA gyrase C-terminal domain, beta-propeller INQ46_15180 PF00521 DNA gyrase/topoisomerase IV, subunit A INQ46_15185 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain INQ46_15185 PF13378 Enolase C-terminal domain-like INQ46_15190 PF07690 Major Facilitator Superfamily INQ46_15210 PF00111 2Fe-2S iron-sulfur cluster binding domain INQ46_15215 PF00268 Ribonucleotide reductase, small chain INQ46_15220 PF00317 Ribonucleotide reductase, all-alpha domain INQ46_15220 PF03477 ATP cone domain INQ46_15220 PF02867 Ribonucleotide reductase, barrel domain INQ46_15240 PF03466 LysR substrate binding domain INQ46_15240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ46_15245 PF03009 Glycerophosphoryl diester phosphodiesterase family INQ46_15250 PF07690 Major Facilitator Superfamily INQ46_15255 PF04324 BFD-like [2Fe-2S] binding domain INQ46_15255 PF01266 FAD dependent oxidoreductase INQ46_15260 PF00890 FAD binding domain INQ46_15265 PF02754 Cysteine-rich domain INQ46_15265 PF13183 4Fe-4S dicluster domain INQ46_15275 PF00994 Probable molybdopterin binding domain INQ46_15280 PF07437 YfaZ precursor INQ46_15285 PF00293 NUDIX domain INQ46_15290 PF00300 Histidine phosphatase superfamily (branch 1) INQ46_15295 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family INQ46_15300 PF00535 Glycosyl transferase family 2 INQ46_15305 PF00551 Formyl transferase INQ46_15305 PF02911 Formyl transferase, C-terminal domain INQ46_15305 PF01370 NAD dependent epimerase/dehydratase family INQ46_15310 PF01522 Polysaccharide deacetylase INQ46_15315 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase INQ46_15320 PF00892 EamA-like transporter family INQ46_15335 PF00501 AMP-binding enzyme INQ46_15335 PF13193 AMP-binding enzyme C-terminal domain INQ46_15340 PF13378 Enolase C-terminal domain-like INQ46_15345 PF00378 Enoyl-CoA hydratase/isomerase INQ46_15350 PF12697 Alpha/beta hydrolase family INQ46_15355 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain INQ46_15355 PF16582 Middle domain of thiamine pyrophosphate INQ46_15355 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain INQ46_15360 PF00425 chorismate binding enzyme INQ46_15365 PF05957 Bacterial protein of unknown function (DUF883) INQ46_15370 PF13673 Acetyltransferase (GNAT) domain INQ46_15375 PF12706 Beta-lactamase superfamily domain INQ46_15380 PF00072 Response regulator receiver domain INQ46_15380 PF01584 CheW-like domain INQ46_15385 PF00361 Proton-conducting membrane transporter INQ46_15390 PF00361 Proton-conducting membrane transporter INQ46_15395 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus INQ46_15395 PF00361 Proton-conducting membrane transporter INQ46_15400 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L INQ46_15405 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 INQ46_15410 PF12838 4Fe-4S dicluster domain INQ46_15415 PF00146 NADH dehydrogenase INQ46_15420 PF01568 Molydopterin dinucleotide binding domain INQ46_15420 PF00384 Molybdopterin oxidoreductase INQ46_15420 PF04879 Molybdopterin oxidoreductase Fe4S4 domain INQ46_15420 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region INQ46_15425 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region INQ46_15425 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit INQ46_15425 PF10531 SLBB domain INQ46_15435 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit INQ46_15435 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit INQ46_15440 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit INQ46_15445 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 INQ46_15455 PF03466 LysR substrate binding domain INQ46_15455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ46_15460 PF00155 Aminotransferase class I and II INQ46_15470 PF02080 TrkA-C domain INQ46_15470 PF03600 Citrate transporter INQ46_15475 PF13419 Haloacid dehalogenase-like hydrolase INQ46_15480 PF03887 YfbU domain INQ46_15485 PF04217 Protein of unknown function, DUF412 INQ46_15490 PF00871 Acetokinase family INQ46_15495 PF01515 Phosphate acetyl/butaryl transferase INQ46_15495 PF07085 DRTGG domain INQ46_15500 PF03606 C4-dicarboxylate anaerobic carrier INQ46_15505 PF13292 1-deoxy-D-xylulose-5-phosphate synthase INQ46_15505 PF02779 Transketolase, pyrimidine binding domain INQ46_15505 PF02780 Transketolase, C-terminal domain INQ46_15510 PF00456 Transketolase, thiamine diphosphate binding domain INQ46_15515 PF03611 PTS system sugar-specific permease component INQ46_15525 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 INQ46_15530 PF00356 Bacterial regulatory proteins, lacI family INQ46_15535 PF00293 NUDIX domain INQ46_15540 PF12850 Calcineurin-like phosphoesterase superfamily domain INQ46_15545 PF02798 Glutathione S-transferase, N-terminal domain INQ46_15545 PF14834 Glutathione S-transferase, C-terminal domain INQ46_15550 PF02798 Glutathione S-transferase, N-terminal domain INQ46_15550 PF00043 Glutathione S-transferase, C-terminal domain INQ46_15555 PF08338 Domain of unknown function (DUF1731) INQ46_15555 PF01370 NAD dependent epimerase/dehydratase family INQ46_15560 PF00005 ABC transporter INQ46_15565 PF00528 Binding-protein-dependent transport system inner membrane component INQ46_15570 PF00528 Binding-protein-dependent transport system inner membrane component INQ46_15575 PF00497 Bacterial extracellular solute-binding proteins, family 3 INQ46_15580 PF00497 Bacterial extracellular solute-binding proteins, family 3 INQ46_15585 PF02441 Flavoprotein INQ46_15590 PF00324 Amino acid permease INQ46_15595 PF01168 Alanine racemase, N-terminal domain INQ46_15600 PF13520 Amino acid permease INQ46_15605 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain INQ46_15605 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain INQ46_15610 PF00158 Sigma-54 interaction domain INQ46_15610 PF13426 PAS domain INQ46_15610 PF02954 Bacterial regulatory protein, Fis family INQ46_15615 PF00156 Phosphoribosyl transferase domain INQ46_15620 PF02674 Colicin V production protein INQ46_15625 PF05036 Sporulation related domain INQ46_15630 PF08245 Mur ligase middle domain INQ46_15630 PF02875 Mur ligase family, glutamate ligase domain INQ46_15635 PF17848 Acetyl-coA carboxylase zinc finger domain INQ46_15635 PF01039 Carboxyl transferase domain INQ46_15640 PF09335 SNARE associated Golgi protein INQ46_15645 PF01416 tRNA pseudouridine synthase INQ46_15650 PF02774 Semialdehyde dehydrogenase, dimerisation domain INQ46_15650 PF01118 Semialdehyde dehydrogenase, NAD binding domain INQ46_15655 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain INQ46_15655 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain INQ46_15655 PF11890 Domain of unknown function (DUF3410) INQ46_15665 PF07690 Major Facilitator Superfamily INQ46_15675 PF13693 Winged helix-turn-helix DNA-binding INQ46_15695 PF00109 Beta-ketoacyl synthase, N-terminal domain INQ46_15695 PF02801 Beta-ketoacyl synthase, C-terminal domain INQ46_15700 PF05430 S-adenosyl-L-methionine-dependent methyltransferase INQ46_15700 PF01266 FAD dependent oxidoreductase INQ46_15705 PF08891 YfcL protein INQ46_15710 PF04315 Elongation factor P hydroxylase INQ46_15715 PF01925 Sulfite exporter TauE/SafE INQ46_15720 PF03411 Penicillin-insensitive murein endopeptidase INQ46_15725 PF01264 Chorismate synthase INQ46_15730 PF05175 Methyltransferase small domain INQ46_15735 PF01713 Smr domain INQ46_15740 PF00300 Histidine phosphatase superfamily (branch 1) INQ46_15745 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain INQ46_15745 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain INQ46_15745 PF00378 Enoyl-CoA hydratase/isomerase INQ46_15750 PF02803 Thiolase, C-terminal domain INQ46_15750 PF00108 Thiolase, N-terminal domain INQ46_15755 PF04175 Protein of unknown function (DUF406) INQ46_15760 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) INQ46_15765 PF04333 MlaA lipoprotein INQ46_15770 PF01226 Formate/nitrite transporter INQ46_15780 PF00589 Phage integrase family INQ46_15780 PF13356 Arm DNA-binding domain INQ46_15780 PF14659 Phage integrase, N-terminal SAM-like domain INQ46_15790 PF01757 Acyltransferase family INQ46_15860 PF04466 Phage terminase large subunit INQ46_15860 PF17288 Terminase RNAseH like domain INQ46_15885 PF03245 Bacteriophage Rz lysis protein INQ46_15900 PF03589 Antitermination protein INQ46_15925 PF05866 Endodeoxyribonuclease RusA INQ46_15945 PF05772 NinB protein INQ46_16020 PF01278 Omptin family INQ46_16030 PF00672 HAMP domain INQ46_16030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase INQ46_16030 PF00512 His Kinase A (phospho-acceptor) domain INQ46_16040 PF07690 Major Facilitator Superfamily INQ46_16045 PF10810 Protein of unknown function (DUF2545) INQ46_16050 PF03279 Bacterial lipid A biosynthesis acyltransferase INQ46_16060 PF00155 Aminotransferase class I and II INQ46_16070 PF01797 Transposase IS200 like INQ46_16075 PF02685 Glucokinase INQ46_16080 PF00654 Voltage gated chloride channel INQ46_16085 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain INQ46_16085 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain INQ46_16085 PF00205 Thiamine pyrophosphate enzyme, central domain INQ46_16090 PF00248 Aldo/keto reductase family INQ46_16095 PF10697 Protein of unknown function (DUF2502) INQ46_16100 PF01566 Natural resistance-associated macrophage protein INQ46_16105 PF01773 Na+ dependent nucleoside transporter N-terminus INQ46_16105 PF07670 Nucleoside recognition INQ46_16105 PF07662 Na+ dependent nucleoside transporter C-terminus INQ46_16110 PF00563 EAL domain INQ46_16110 PF05231 MASE1 INQ46_16125 PF07037 Putative transcription regulator (DUF1323) INQ46_16130 PF07037 Putative transcription regulator (DUF1323) INQ46_16135 PF00749 tRNA synthetases class I (E and Q), catalytic domain INQ46_16160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ46_16160 PF03466 LysR substrate binding domain INQ46_16165 PF13593 SBF-like CPA transporter family (DUF4137) INQ46_16170 PF12843 Putative quorum-sensing-regulated virulence factor INQ46_16175 PF00533 BRCA1 C Terminus (BRCT) domain INQ46_16175 PF01653 NAD-dependent DNA ligase adenylation domain INQ46_16175 PF03120 NAD-dependent DNA ligase OB-fold domain INQ46_16175 PF03119 NAD-dependent DNA ligase C4 zinc finger domain INQ46_16175 PF12826 Helix-hairpin-helix motif INQ46_16180 PF04354 ZipA, C-terminal FtsZ-binding domain INQ46_16190 PF00291 Pyridoxal-phosphate dependent enzyme INQ46_16195 PF00381 PTS HPr component phosphorylation site INQ46_16200 PF05524 PEP-utilising enzyme, N-terminal INQ46_16200 PF02896 PEP-utilising enzyme, TIM barrel domain INQ46_16200 PF00391 PEP-utilising enzyme, mobile domain INQ46_16205 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 INQ46_16215 PF08543 Phosphomethylpyrimidine kinase INQ46_16220 PF00392 Bacterial regulatory proteins, gntR family INQ46_16220 PF00155 Aminotransferase class I and II INQ46_16225 PF00117 Glutamine amidotransferase class-I INQ46_16230 PF17263 Family of unknown function (DUF5329) INQ46_16235 PF00291 Pyridoxal-phosphate dependent enzyme INQ46_16240 PF00005 ABC transporter INQ46_16245 PF00528 Binding-protein-dependent transport system inner membrane component INQ46_16250 PF00528 Binding-protein-dependent transport system inner membrane component INQ46_16265 PF04261 Dyp-type peroxidase family INQ46_16270 PF06572 Protein of unknown function (DUF1131) INQ46_16275 PF11143 Protein of unknown function (DUF2919) INQ46_16280 PF00583 Acetyltransferase (GNAT) family INQ46_16285 PF01520 N-acetylmuramoyl-L-alanine amidase INQ46_16290 PF01218 Coproporphyrinogen III oxidase INQ46_16295 PF12833 Helix-turn-helix domain INQ46_16300 PF16365 Ethanolamine utilization protein EutK C-terminus INQ46_16300 PF00936 BMC domain INQ46_16305 PF00936 BMC domain INQ46_16310 PF05985 Ethanolamine ammonia-lyase light chain (EutC) INQ46_16315 PF06751 Ethanolamine ammonia lyase large subunit (EutB) INQ46_16320 PF06277 Ethanolamine utilisation protein EutA INQ46_16325 PF04346 Ethanolamine utilisation protein, EutH INQ46_16330 PF00465 Iron-containing alcohol dehydrogenase INQ46_16340 PF00171 Aldehyde dehydrogenase family INQ46_16345 PF03319 Ethanolamine utilisation protein EutN/carboxysome INQ46_16350 PF00936 BMC domain INQ46_16355 PF01515 Phosphate acetyl/butaryl transferase INQ46_16360 PF01923 Cobalamin adenosyltransferase INQ46_16365 PF06249 Ethanolamine utilisation protein EutQ INQ46_16370 PF10662 Ethanolamine utilisation - propanediol utilisation INQ46_16375 PF00936 BMC domain INQ46_16380 PF01515 Phosphate acetyl/butaryl transferase INQ46_16380 PF00390 Malic enzyme, N-terminal domain INQ46_16380 PF03949 Malic enzyme, NAD binding domain INQ46_16385 PF00923 Transaldolase/Fructose-6-phosphate aldolase INQ46_16390 PF02780 Transketolase, C-terminal domain INQ46_16390 PF02779 Transketolase, pyrimidine binding domain INQ46_16390 PF00456 Transketolase, thiamine diphosphate binding domain INQ46_16400 PF06674 Protein of unknown function (DUF1176) INQ46_16405 PF00293 NUDIX domain INQ46_16425 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster INQ46_16425 PF07992 Pyridine nucleotide-disulphide oxidoreductase INQ46_16425 PF13247 4Fe-4S dicluster domain INQ46_16430 PF00672 HAMP domain INQ46_16430 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term INQ46_16430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase INQ46_16430 PF07730 Histidine kinase INQ46_16435 PF00873 AcrB/AcrD/AcrF family INQ46_16450 PF03960 ArsC family INQ46_16455 PF01546 Peptidase family M20/M25/M40 INQ46_16455 PF07687 Peptidase dimerisation domain INQ46_16460 PF13980 Uncharacterised protein family (UPF0370) INQ46_16465 PF05127 Helicase INQ46_16465 PF17176 tRNA-binding domain INQ46_16465 PF08351 Domain of unknown function (DUF1726) INQ46_16465 PF13718 GNAT acetyltransferase 2 INQ46_16470 PF04228 Putative neutral zinc metallopeptidase INQ46_16475 PF01259 SAICAR synthetase INQ46_16480 PF06804 NlpB/DapX lipoprotein INQ46_16485 PF00701 Dihydrodipicolinate synthetase family INQ46_16490 PF01842 ACT domain INQ46_16495 PF00578 AhpC/TSA family INQ46_16505 PF01594 AI-2E family transporter INQ46_16510 PF01435 Peptidase family M48 INQ46_16515 PF03960 ArsC family INQ46_16520 PF00308 Bacterial dnaA protein INQ46_16525 PF00860 Permease family INQ46_16535 PF02769 AIR synthase related protein, C-terminal domain INQ46_16535 PF00586 AIR synthase related protein, N-terminal domain INQ46_16540 PF00551 Formyl transferase INQ46_16545 PF13090 Polyphosphate kinase C-terminal domain 2 INQ46_16545 PF17941 Polyphosphate kinase C-terminal domain 1 INQ46_16545 PF02503 Polyphosphate kinase middle domain INQ46_16545 PF13089 Polyphosphate kinase N-terminal domain INQ46_16550 PF02541 Ppx/GppA phosphatase family INQ46_16575 PF11119 Protein of unknown function (DUF2633) INQ46_16630 PF06630 Enterobacterial exodeoxyribonuclease VIII INQ46_16630 PF12684 PDDEXK-like domain of unknown function (DUF3799) INQ46_16660 PF00149 Calcineurin-like phosphoesterase INQ46_16670 PF00958 GMP synthase C terminal domain INQ46_16670 PF02540 NAD synthase INQ46_16670 PF00117 Glutamine amidotransferase class-I INQ46_16675 PF00571 CBS domain INQ46_16675 PF00478 IMP dehydrogenase / GMP reductase domain INQ46_16680 PF13742 OB-fold nucleic acid binding domain INQ46_16680 PF02601 Exonuclease VII, large subunit INQ46_16685 PF03797 Autotransporter beta-domain INQ46_16715 PF07191 zinc-ribbons INQ46_16720 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal INQ46_16720 PF01926 50S ribosome-binding GTPase INQ46_16725 PF13360 PQQ-like domain INQ46_16730 PF09976 Tetratricopeptide repeat-like domain INQ46_16735 PF03129 Anticodon binding domain INQ46_16735 PF13393 Histidyl-tRNA synthetase INQ46_16740 PF04551 GcpE protein INQ46_16745 PF13464 Domain of unknown function (DUF4115) INQ46_16750 PF04055 Radical SAM superfamily INQ46_16755 PF00334 Nucleoside diphosphate kinase INQ46_16780 PF00905 Penicillin binding protein transpeptidase domain INQ46_16780 PF06832 Penicillin-Binding Protein C-terminus Family INQ46_16780 PF00912 Transglycosylase INQ46_16785 PF01835 MG2 domain INQ46_16785 PF07678 A-macroglobulin TED domain INQ46_16785 PF11974 Bacterial alpha-2-macroglobulin MG3 domain INQ46_16785 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain INQ46_16785 PF07703 Alpha-2-macroglobulin bait region domain INQ46_16785 PF17962 Bacterial macroglobulin domain 6 INQ46_16785 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain INQ46_16785 PF00207 Alpha-2-macroglobulin family INQ46_16785 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain INQ46_16790 PF00581 Rhodanese-like domain INQ46_16805 PF14581 SseB protein C-terminal domain INQ46_16805 PF07179 SseB protein N-terminal domain INQ46_16810 PF12404 Peptidase INQ46_16810 PF00883 Cytosol aminopeptidase family, catalytic domain INQ46_16815 PF04384 Iron-sulphur cluster assembly INQ46_16820 PF00111 2Fe-2S iron-sulfur cluster binding domain INQ46_16825 PF00012 Hsp70 protein INQ46_16830 PF07743 HSCB C-terminal oligomerisation domain INQ46_16835 PF01521 Iron-sulphur cluster biosynthesis INQ46_16840 PF01592 NifU-like N terminal domain INQ46_16845 PF00266 Aminotransferase class-V INQ46_16850 PF02082 Transcriptional regulator INQ46_16855 PF00588 SpoU rRNA Methylase family INQ46_16860 PF00459 Inositol monophosphatase family INQ46_16865 PF12146 Serine aminopeptidase, S33 INQ46_16875 PF00175 Oxidoreductase NAD-binding domain INQ46_16875 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B INQ46_16880 PF13187 4Fe-4S dicluster domain INQ46_16880 PF01077 Nitrite and sulphite reductase 4Fe-4S domain INQ46_16880 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain INQ46_16885 PF03824 High-affinity nickel-transport protein INQ46_16895 PF00874 PRD domain INQ46_16900 PF12832 MFS_1 like family INQ46_16905 PF00464 Serine hydroxymethyltransferase INQ46_16910 PF00970 Oxidoreductase FAD-binding domain INQ46_16910 PF00042 Globin INQ46_16910 PF00175 Oxidoreductase NAD-binding domain INQ46_16915 PF00486 Transcriptional regulatory protein, C terminal INQ46_16915 PF18500 CadC C-terminal domain 1 INQ46_16920 PF13520 Amino acid permease INQ46_16925 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain INQ46_16925 PF01276 Orn/Lys/Arg decarboxylase, major domain INQ46_16925 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain INQ46_16930 PF00854 POT family INQ46_16935 PF00543 Nitrogen regulatory protein P-II INQ46_16940 PF00158 Sigma-54 interaction domain INQ46_16940 PF00072 Response regulator receiver domain INQ46_16945 PF13942 YfhG lipoprotein INQ46_16950 PF00512 His Kinase A (phospho-acceptor) domain INQ46_16950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase INQ46_16955 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal INQ46_16955 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain INQ46_16955 PF02769 AIR synthase related protein, C-terminal domain INQ46_16965 PF01464 Transglycosylase SLT domain INQ46_16965 PF00497 Bacterial extracellular solute-binding proteins, family 3 INQ46_16970 PF14437 MafB19-like deaminase INQ46_16980 PF00367 phosphotransferase system, EIIB INQ46_16980 PF02378 Phosphotransferase system, EIIC INQ46_16985 PF01380 SIS domain INQ46_16990 PF01418 Helix-turn-helix domain, rpiR family INQ46_16990 PF01380 SIS domain INQ46_16995 PF08546 Ketopantoate reductase PanE/ApbA C terminal INQ46_16995 PF02558 Ketopantoate reductase PanE/ApbA INQ46_17000 PF07690 Major Facilitator Superfamily INQ46_17005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ46_17005 PF03466 LysR substrate binding domain INQ46_17010 PF12838 4Fe-4S dicluster domain INQ46_17015 PF01648 4'-phosphopantetheinyl transferase superfamily INQ46_17020 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ INQ46_17025 PF02565 Recombination protein O C terminal INQ46_17025 PF11967 Recombination protein O N terminal INQ46_17030 PF01926 50S ribosome-binding GTPase INQ46_17030 PF07650 KH domain INQ46_17035 PF00035 Double-stranded RNA binding motif INQ46_17035 PF14622 Ribonuclease-III-like INQ46_17040 PF10502 Signal peptidase, peptidase S26 INQ46_17045 PF03144 Elongation factor Tu domain 2 INQ46_17045 PF06421 GTP-binding protein LepA C-terminus INQ46_17045 PF00679 Elongation factor G C-terminus INQ46_17045 PF00009 Elongation factor Tu GTP binding domain INQ46_17065 PF02413 Caudovirales tail fibre assembly protein, lambda gpK INQ46_17120 PF00717 Peptidase S24-like INQ46_17120 PF01381 Helix-turn-helix INQ46_17150 PF17188 MucB/RseB C-terminal domain INQ46_17150 PF03888 MucB/RseB N-terminal domain INQ46_17155 PF03873 Anti sigma-E protein RseA, C-terminal domain INQ46_17155 PF03872 Anti sigma-E protein RseA, N-terminal domain INQ46_17160 PF08281 Sigma-70, region 4 INQ46_17160 PF04542 Sigma-70 region 2 INQ46_17170 PF02910 Fumarate reductase flavoprotein C-term INQ46_17170 PF00890 FAD binding domain INQ46_17175 PF05175 Methyltransferase small domain INQ46_17180 PF00271 Helicase conserved C-terminal domain INQ46_17180 PF00270 DEAD/DEAH box helicase INQ46_17190 PF01797 Transposase IS200 like INQ46_17200 PF03466 LysR substrate binding domain INQ46_17200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ46_17205 PF01810 LysE type translocator INQ46_17210 PF01228 Glycine radical INQ46_17215 PF03167 Uracil DNA glycosylase superfamily INQ46_17220 PF00588 SpoU rRNA Methylase family INQ46_17220 PF08032 RNA 2'-O ribose methyltransferase substrate binding INQ46_17225 PF00085 Thioredoxin INQ46_17230 PF03942 DTW domain INQ46_17235 PF13380 CoA binding domain INQ46_17235 PF00583 Acetyltransferase (GNAT) family INQ46_17235 PF13607 Succinyl-CoA ligase like flavodoxin domain INQ46_17240 PF13091 PLD-like domain INQ46_17245 PF10043 Predicted periplasmic lipoprotein (DUF2279) INQ46_17250 PF00083 Sugar (and other) transporter INQ46_17280 PF10431 C-terminal, D2-small domain, of ClpB protein INQ46_17280 PF02861 Clp amino terminal domain, pathogenicity island component INQ46_17280 PF17871 AAA lid domain INQ46_17280 PF00004 ATPase family associated with various cellular activities (AAA) INQ46_17280 PF07724 AAA domain (Cdc48 subfamily) INQ46_17285 PF02578 Multi-copper polyphenol oxidoreductase laccase INQ46_17290 PF00849 RNA pseudouridylate synthase INQ46_17290 PF01479 S4 domain INQ46_17295 PF13525 Outer membrane lipoprotein INQ46_17300 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein INQ46_17310 PF00800 Prephenate dehydratase INQ46_17310 PF01817 Chorismate mutase type II INQ46_17315 PF08450 SMP-30/Gluconolactonase/LRE-like region INQ46_17325 PF01817 Chorismate mutase type II INQ46_17325 PF02153 Prephenate dehydrogenase INQ46_17330 PF00793 DAHP synthetase I family INQ46_17335 PF13689 YfiR/HmsC-like INQ46_17345 PF01245 Ribosomal protein L19 INQ46_17350 PF01746 tRNA (Guanine-1)-methyltransferase INQ46_17355 PF05239 PRC-barrel domain INQ46_17355 PF01782 RimM N-terminal domain INQ46_17360 PF00886 Ribosomal protein S16 INQ46_17365 PF02978 Signal peptide binding domain INQ46_17365 PF02881 SRP54-type protein, helical bundle domain INQ46_17365 PF00448 SRP54-type protein, GTPase domain INQ46_17370 PF01578 Cytochrome C assembly protein INQ46_17375 PF00571 CBS domain INQ46_17375 PF03471 Transporter associated domain INQ46_17375 PF01595 Cyclin M transmembrane N-terminal domain INQ46_17385 PF01025 GrpE INQ46_17390 PF01513 ATP-NAD kinase INQ46_17395 PF02463 RecF/RecN/SMC N terminal domain INQ46_17400 PF04355 SmpA / OmlA family INQ46_17405 PF03658 RnfH family Ubiquitin INQ46_17410 PF03364 Polyketide cyclase / dehydrase and lipid transport INQ46_17415 PF01668 SmpB protein INQ46_17430 PF00005 ABC transporter INQ46_17430 PF00664 ABC transporter transmembrane region INQ46_17435 PF00529 HlyD membrane-fusion protein of T1SS INQ46_17435 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion INQ46_17445 PF00589 Phage integrase family INQ46_17445 PF13356 Arm DNA-binding domain INQ46_17475 PF04606 Ogr/Delta-like zinc finger INQ46_17510 PF17345 Family of unknown function (DUF5375) INQ46_17530 PF00490 Delta-aminolevulinic acid dehydratase INQ46_17535 PF00501 AMP-binding enzyme INQ46_17535 PF13193 AMP-binding enzyme C-terminal domain INQ46_17535 PF16177 Acetyl-coenzyme A synthetase N-terminus INQ46_17540 PF03972 MmgE/PrpD family INQ46_17545 PF00285 Citrate synthase, C-terminal domain INQ46_17560 PF07338 Protein of unknown function (DUF1471) INQ46_17565 PF01810 LysE type translocator INQ46_17570 PF00593 TonB dependent receptor INQ46_17570 PF07715 TonB-dependent Receptor Plug Domain INQ46_17585 PF02322 Cytochrome bd terminal oxidase subunit II INQ46_17590 PF01654 Cytochrome bd terminal oxidase subunit I INQ46_17600 PF04851 Type III restriction enzyme, res subunit INQ46_17600 PF08774 VRR-NUC domain INQ46_17605 PF01555 DNA methylase INQ46_17605 PF18273 Type III R-M EcoP15I C-terminal domain INQ46_17610 PF07690 Major Facilitator Superfamily INQ46_17635 PF02796 Helix-turn-helix domain of resolvase INQ46_17635 PF00239 Resolvase, N terminal domain INQ46_17650 PF01797 Transposase IS200 like INQ46_17655 PF02413 Caudovirales tail fibre assembly protein, lambda gpK INQ46_17665 PF06530 Phage antitermination protein Q INQ46_17760 PF14659 Phage integrase, N-terminal SAM-like domain INQ46_17760 PF13356 Arm DNA-binding domain INQ46_17760 PF00589 Phage integrase family INQ46_17770 PF00171 Aldehyde dehydrogenase family INQ46_17775 PF01472 PUA domain INQ46_17775 PF00696 Amino acid kinase family INQ46_17780 PF00267 Gram-negative porin INQ46_17785 PF07417 Sigma factor-binding transcriptional regulator Crl INQ46_17790 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) INQ46_17795 PF00156 Phosphoribosyl transferase domain INQ46_17800 PF01546 Peptidase family M20/M25/M40 INQ46_17800 PF07687 Peptidase dimerisation domain INQ46_17805 PF00472 RF-1 domain INQ46_17815 PF00817 impB/mucB/samB family INQ46_17815 PF11798 IMS family HHH motif INQ46_17815 PF11799 impB/mucB/samB family C-terminal domain INQ46_17820 PF03734 L,D-transpeptidase catalytic domain INQ46_17825 PF13230 Glutamine amidotransferases class-II INQ46_17830 PF13580 SIS domain INQ46_17835 PF09317 Domain of unknown function (DUF1974) INQ46_17835 PF02771 Acyl-CoA dehydrogenase, N-terminal domain INQ46_17835 PF02770 Acyl-CoA dehydrogenase, middle domain INQ46_17835 PF00441 Acyl-CoA dehydrogenase, C-terminal domain INQ46_17840 PF00795 Carbon-nitrogen hydrolase INQ46_17850 PF13505 Outer membrane protein beta-barrel domain INQ46_17895 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath INQ46_17900 PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 INQ46_17915 PF10431 C-terminal, D2-small domain, of ClpB protein INQ46_17915 PF17871 AAA lid domain INQ46_17915 PF07724 AAA domain (Cdc48 subfamily) INQ46_17915 PF00004 ATPase family associated with various cellular activities (AAA) INQ46_17930 PF04965 Gene 25-like lysozyme INQ46_17955 PF00929 Exonuclease INQ46_17960 PF00075 RNase H INQ46_17965 PF08241 Methyltransferase domain INQ46_17970 PF00753 Metallo-beta-lactamase superfamily INQ46_17970 PF16123 Hydroxyacylglutathione hydrolase C-terminus INQ46_17975 PF01464 Transglycosylase SLT domain INQ46_17975 PF01476 LysM domain INQ46_17980 PF08241 Methyltransferase domain INQ46_17985 PF03372 Endonuclease/Exonuclease/phosphatase family INQ46_17990 PF07690 Major Facilitator Superfamily INQ46_17995 PF03466 LysR substrate binding domain INQ46_17995 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ46_18000 PF00248 Aldo/keto reductase family INQ46_18040 PF09383 NIL domain INQ46_18040 PF00005 ABC transporter INQ46_18045 PF00528 Binding-protein-dependent transport system inner membrane component INQ46_18050 PF03180 NLPA lipoprotein INQ46_18055 PF16358 RcsF lipoprotein INQ46_18060 PF01980 tRNA-methyltransferase O INQ46_18060 PF18389 TrmO C-terminal domain INQ46_18065 PF04073 Aminoacyl-tRNA editing domain INQ46_18065 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) INQ46_18065 PF03129 Anticodon binding domain INQ46_18070 PF17185 NlpE C-terminal OB domain INQ46_18070 PF04170 NlpE N-terminal domain INQ46_18075 PF00472 RF-1 domain INQ46_18080 PF07152 YaeQ protein INQ46_18085 PF06786 Uncharacterised protein family (UPF0253) INQ46_18090 PF07073 Modulator of Rho-dependent transcription termination (ROF) INQ46_18095 PF11734 TilS substrate C-terminal domain INQ46_18095 PF09179 TilS substrate binding domain INQ46_18095 PF01171 PP-loop family INQ46_18100 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily INQ46_18105 PF01276 Orn/Lys/Arg decarboxylase, major domain INQ46_18105 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain INQ46_18105 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain INQ46_18110 PF18416 N-acetylglucosamine binding protein domain 2 INQ46_18110 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading INQ46_18115 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit INQ46_18120 PF17657 Bacterial DNA polymerase III alpha subunit finger domain INQ46_18120 PF01336 OB-fold nucleic acid binding domain INQ46_18120 PF02811 PHP domain INQ46_18120 PF14579 Helix-hairpin-helix motif INQ46_18120 PF07733 Bacterial DNA polymerase III alpha NTPase domain INQ46_18125 PF01351 Ribonuclease HII INQ46_18130 PF02684 Lipid-A-disaccharide synthetase INQ46_18135 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 INQ46_18135 PF00132 Bacterial transferase hexapeptide (six repeats) INQ46_18140 PF07977 FabA-like domain INQ46_18145 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD INQ46_18145 PF00132 Bacterial transferase hexapeptide (six repeats) INQ46_18150 PF03938 Outer membrane protein (OmpH-like) INQ46_18155 PF01103 Surface antigen INQ46_18155 PF07244 Surface antigen variable number repeat INQ46_18160 PF02163 Peptidase family M50 INQ46_18160 PF17820 PDZ domain INQ46_18170 PF01255 Putative undecaprenyl diphosphate synthase INQ46_18175 PF13288 DXP reductoisomerase C-terminal domain INQ46_18175 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase INQ46_18175 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain INQ46_18180 PF01765 Ribosome recycling factor INQ46_18185 PF00696 Amino acid kinase family INQ46_18190 PF00889 Elongation factor TS INQ46_18195 PF00318 Ribosomal protein S2 INQ46_18200 PF00557 Metallopeptidase family M24 INQ46_18205 PF01842 ACT domain INQ46_18205 PF08335 GlnD PII-uridylyltransferase INQ46_18205 PF01966 HD domain INQ46_18205 PF01909 Nucleotidyltransferase domain INQ46_18210 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal INQ46_18210 PF14602 Hexapeptide repeat of succinyl-transferase INQ46_18210 PF00132 Bacterial transferase hexapeptide (six repeats) INQ46_18215 PF07690 Major Facilitator Superfamily INQ46_18215 PF00083 Sugar (and other) transporter INQ46_18220 PF11944 Protein of unknown function (DUF3461) INQ46_18225 PF17853 GGDEF-like domain INQ46_18225 PF05651 Putative sugar diacid recognition INQ46_18225 PF13556 PucR C-terminal helix-turn-helix domain INQ46_18230 PF00595 PDZ domain INQ46_18235 PF13286 Phosphohydrolase-associated domain INQ46_18235 PF01966 HD domain INQ46_18240 PF01048 Phosphorylase superfamily INQ46_18245 PF01497 Periplasmic binding protein INQ46_18250 PF03458 UPF0126 domain INQ46_18255 PF01521 Iron-sulphur cluster biosynthesis INQ46_18260 PF00654 Voltage gated chloride channel INQ46_18265 PF00202 Aminotransferase class-III INQ46_18270 PF11245 Protein of unknown function (DUF2544) INQ46_18275 PF00419 Fimbrial protein INQ46_18280 PF00419 Fimbrial protein INQ46_18285 PF00419 Fimbrial protein INQ46_18290 PF02753 Pili assembly chaperone PapD, C-terminal domain INQ46_18290 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain INQ46_18295 PF13953 PapC C-terminal domain INQ46_18295 PF13954 PapC N-terminal domain INQ46_18295 PF00577 Outer membrane usher protein INQ46_18305 PF01032 FecCD transport family INQ46_18310 PF01497 Periplasmic binding protein INQ46_18315 PF00005 ABC transporter INQ46_18320 PF07715 TonB-dependent Receptor Plug Domain INQ46_18320 PF00593 TonB dependent receptor INQ46_18325 PF14812 Transmembrane domain of transglycosylase PBP1 at N-terminal INQ46_18325 PF00912 Transglycosylase INQ46_18325 PF14814 Bifunctional transglycosylase second domain INQ46_18325 PF00905 Penicillin binding protein transpeptidase domain INQ46_18330 PF08482 ATP-dependent helicase C-terminal INQ46_18330 PF00271 Helicase conserved C-terminal domain INQ46_18330 PF04408 Helicase associated domain (HA2) INQ46_18330 PF00270 DEAD/DEAH box helicase INQ46_18335 PF02834 LigT like Phosphoesterase INQ46_18345 PF01258 Prokaryotic dksA/traR C4-type zinc finger INQ46_18350 PF00749 tRNA synthetases class I (E and Q), catalytic domain INQ46_18355 PF12626 Polymerase A arginine-rich C-terminus INQ46_18355 PF01743 Poly A polymerase head domain INQ46_18355 PF12627 Probable RNA and SrmB- binding site of polymerase A INQ46_18360 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) INQ46_18370 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain INQ46_18370 PF02753 Pili assembly chaperone PapD, C-terminal domain INQ46_18375 PF00577 Outer membrane usher protein INQ46_18375 PF13954 PapC N-terminal domain INQ46_18375 PF13953 PapC C-terminal domain INQ46_18380 PF00419 Fimbrial protein INQ46_18385 PF00419 Fimbrial protein INQ46_18410 PF02548 Ketopantoate hydroxymethyltransferase INQ46_18415 PF02569 Pantoate-beta-alanine ligase INQ46_18420 PF02261 Aspartate decarboxylase INQ46_18425 PF01522 Polysaccharide deacetylase INQ46_18430 PF03610 PTS system fructose IIA component INQ46_18435 PF01061 ABC-2 type transporter INQ46_18440 PF00005 ABC transporter INQ46_18445 PF00484 Carbonic anhydrase INQ46_18450 PF00156 Phosphoribosyl transferase domain INQ46_18455 PF01011 PQQ enzyme repeat INQ46_18460 PF00394 Multicopper oxidase INQ46_18460 PF07732 Multicopper oxidase INQ46_18460 PF07731 Multicopper oxidase INQ46_18465 PF09691 Type II secretion system pilotin lipoprotein (PulS_OutS) INQ46_18470 PF17284 Spermidine synthase tetramerisation domain INQ46_18475 PF02675 S-adenosylmethionine decarboxylase INQ46_18480 PF00455 DeoR C terminal sensor domain INQ46_18480 PF08220 DeoR-like helix-turn-helix domain INQ46_18485 PF04166 Pyridoxal phosphate biosynthetic protein PdxA INQ46_18490 PF07005 Sugar-binding N-terminal domain INQ46_18490 PF17042 Nucleotide-binding C-terminal domain INQ46_18495 PF03812 2-keto-3-deoxygluconate permease INQ46_18500 PF06062 Uncharacterised protein family (UPF0231) INQ46_18515 PF11791 Aconitate B N-terminal domain INQ46_18515 PF00330 Aconitase family (aconitate hydratase) INQ46_18515 PF06434 Aconitate hydratase 2 N-terminus INQ46_18520 PF11737 Protein of unknown function (DUF3300) INQ46_18535 PF07992 Pyridine nucleotide-disulphide oxidoreductase INQ46_18535 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain INQ46_18540 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) INQ46_18540 PF00364 Biotin-requiring enzyme INQ46_18540 PF02817 e3 binding domain INQ46_18545 PF17831 Pyruvate dehydrogenase E1 component middle domain INQ46_18545 PF00456 Transketolase, thiamine diphosphate binding domain INQ46_18550 PF07729 FCD domain INQ46_18550 PF00392 Bacterial regulatory proteins, gntR family INQ46_18555 PF00324 Amino acid permease INQ46_18565 PF04616 Glycosyl hydrolases family 43 INQ46_18565 PF05270 Alpha-L-arabinofuranosidase B (ABFB) domain INQ46_18570 PF17113 Regulatory signalling modulator protein AmpE INQ46_18575 PF01510 N-acetylmuramoyl-L-alanine amidase INQ46_18580 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain INQ46_18580 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain INQ46_18585 PF07963 Prokaryotic N-terminal methylation motif INQ46_18590 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain INQ46_18590 PF00437 Type II/IV secretion system protein INQ46_18595 PF00482 Type II secretion system (T2SS), protein F INQ46_18600 PF00478 IMP dehydrogenase / GMP reductase domain INQ46_18605 PF01121 Dephospho-CoA kinase INQ46_18610 PF07072 Cell division protein INQ46_18615 PF03884 DNA gyrase inhibitor YacG INQ46_18620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ46_18620 PF03466 LysR substrate binding domain INQ46_18625 PF00248 Aldo/keto reductase family INQ46_18630 PF00293 NUDIX domain INQ46_18635 PF02810 SEC-C motif INQ46_18635 PF07517 SecA DEAD-like domain INQ46_18635 PF01043 SecA preprotein cross-linking domain INQ46_18635 PF07516 SecA Wing and Scaffold domain INQ46_18640 PF06558 Secretion monitor precursor protein (SecM) INQ46_18645 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase INQ46_18650 PF00091 Tubulin/FtsZ family, GTPase domain INQ46_18650 PF12327 FtsZ family, C-terminal domain INQ46_18655 PF02491 SHS2 domain inserted in FTSA INQ46_18660 PF03799 Cell division protein FtsQ INQ46_18660 PF08478 POTRA domain, FtsQ-type INQ46_18665 PF07478 D-ala D-ala ligase C-terminus INQ46_18665 PF01820 D-ala D-ala ligase N-terminus INQ46_18670 PF08245 Mur ligase middle domain INQ46_18670 PF02875 Mur ligase family, glutamate ligase domain INQ46_18670 PF01225 Mur ligase family, catalytic domain INQ46_18675 PF03033 Glycosyltransferase family 28 N-terminal domain INQ46_18675 PF04101 Glycosyltransferase family 28 C-terminal domain INQ46_18680 PF01098 Cell cycle protein INQ46_18685 PF08245 Mur ligase middle domain INQ46_18685 PF02875 Mur ligase family, glutamate ligase domain INQ46_18690 PF00953 Glycosyl transferase family 4 INQ46_18690 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 INQ46_18695 PF08245 Mur ligase middle domain INQ46_18695 PF02875 Mur ligase family, glutamate ligase domain INQ46_18695 PF01225 Mur ligase family, catalytic domain INQ46_18700 PF01225 Mur ligase family, catalytic domain INQ46_18700 PF02875 Mur ligase family, glutamate ligase domain INQ46_18700 PF08245 Mur ligase middle domain INQ46_18705 PF03717 Penicillin-binding Protein dimerisation domain INQ46_18705 PF00905 Penicillin binding protein transpeptidase domain INQ46_18710 PF04999 Cell division protein FtsL INQ46_18715 PF01795 MraW methylase family INQ46_18720 PF02381 MraZ protein, putative antitoxin-like INQ46_18725 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family INQ46_18725 PF00356 Bacterial regulatory proteins, lacI family INQ46_18730 PF10369 Small subunit of acetolactate synthase INQ46_18735 PF00205 Thiamine pyrophosphate enzyme, central domain INQ46_18735 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain INQ46_18735 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain INQ46_18740 PF03466 LysR substrate binding domain INQ46_18740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ46_18745 PF08054 Leucine operon leader peptide INQ46_18750 PF08502 LeuA allosteric (dimerisation) domain INQ46_18750 PF00682 HMGL-like INQ46_18755 PF00180 Isocitrate/isopropylmalate dehydrogenase INQ46_18760 PF00330 Aconitase family (aconitate hydratase) INQ46_18765 PF00694 Aconitase C-terminal domain INQ46_18775 PF12793 Sugar transport-related sRNA regulator N-term INQ46_18775 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle INQ46_18785 PF00528 Binding-protein-dependent transport system inner membrane component INQ46_18790 PF00005 ABC transporter INQ46_18795 PF09335 SNARE associated Golgi protein INQ46_18800 PF02311 AraC-like ligand binding domain INQ46_18800 PF12833 Helix-turn-helix domain INQ46_18805 PF02782 FGGY family of carbohydrate kinases, C-terminal domain INQ46_18810 PF11762 L-arabinose isomerase C-terminal domain INQ46_18810 PF02610 L-arabinose isomerase INQ46_18815 PF00596 Class II Aldolase and Adducin N-terminal domain INQ46_18835 PF03104 DNA polymerase family B, exonuclease domain INQ46_18835 PF00136 DNA polymerase family B INQ46_18840 PF18339 RapA N-terminal Tudor like domain 1 INQ46_18840 PF18337 RapA N-terminal Tudor like domain INQ46_18840 PF00176 SNF2 family N-terminal domain INQ46_18840 PF00271 Helicase conserved C-terminal domain INQ46_18840 PF12137 RNA polymerase recycling family C-terminal INQ46_18845 PF00849 RNA pseudouridylate synthase INQ46_18850 PF00226 DnaJ domain INQ46_18850 PF05099 Tellurite resistance protein TerB INQ46_18855 PF03968 OstA-like protein INQ46_18855 PF04453 LPS transport system D INQ46_18860 PF09312 SurA N-terminal domain INQ46_18860 PF00639 PPIC-type PPIASE domain INQ46_18865 PF04166 Pyridoxal phosphate biosynthetic protein PdxA INQ46_18870 PF00398 Ribosomal RNA adenine dimethylase INQ46_18875 PF04379 ApaG domain INQ46_18880 PF00149 Calcineurin-like phosphoesterase INQ46_18885 PF00186 Dihydrofolate reductase INQ46_18890 PF02254 TrkA-N domain INQ46_18890 PF00999 Sodium/hydrogen exchanger family INQ46_18895 PF02525 Flavodoxin-like fold INQ46_18900 PF00884 Sulfatase INQ46_18915 PF06004 Bacterial protein of unknown function (DUF903) INQ46_18920 PF00083 Sugar (and other) transporter INQ46_18930 PF01494 FAD binding domain INQ46_18935 PF00766 Electron transfer flavoprotein FAD-binding domain INQ46_18935 PF01012 Electron transfer flavoprotein domain INQ46_18940 PF01012 Electron transfer flavoprotein domain INQ46_18945 PF02028 BCCT, betaine/carnitine/choline family transporter INQ46_18950 PF02771 Acyl-CoA dehydrogenase, N-terminal domain INQ46_18950 PF00441 Acyl-CoA dehydrogenase, C-terminal domain INQ46_18950 PF02770 Acyl-CoA dehydrogenase, middle domain INQ46_18955 PF02515 CoA-transferase family III INQ46_18960 PF13193 AMP-binding enzyme C-terminal domain INQ46_18960 PF00501 AMP-binding enzyme INQ46_18965 PF00378 Enoyl-CoA hydratase/isomerase INQ46_18970 PF00132 Bacterial transferase hexapeptide (six repeats) INQ46_18975 PF07180 CaiF/GrlA transcriptional regulator INQ46_18980 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain INQ46_18980 PF02142 MGS-like domain INQ46_18980 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain INQ46_18985 PF00117 Glutamine amidotransferase class-I INQ46_18985 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain INQ46_18995 PF01113 Dihydrodipicolinate reductase, N-terminus INQ46_18995 PF05173 Dihydrodipicolinate reductase, C-terminus INQ46_19000 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase INQ46_19005 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase INQ46_19010 PF04223 Citrate lyase, alpha subunit (CitF) INQ46_19015 PF03328 HpcH/HpaI aldolase/citrate lyase family INQ46_19020 PF06857 Malonate decarboxylase delta subunit (MdcD) INQ46_19025 PF00583 Acetyltransferase (GNAT) family INQ46_19025 PF08218 Citrate lyase ligase C-terminal domain INQ46_19030 PF03390 2-hydroxycarboxylate transporter family INQ46_19035 PF04277 Oxaloacetate decarboxylase, gamma chain INQ46_19040 PF00364 Biotin-requiring enzyme INQ46_19040 PF00682 HMGL-like INQ46_19040 PF02436 Conserved carboxylase domain INQ46_19045 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit INQ46_19050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase INQ46_19050 PF17203 Single cache domain 3 INQ46_19055 PF00072 Response regulator receiver domain INQ46_19055 PF12431 Transcriptional regulator INQ46_19060 PF01156 Inosine-uridine preferring nucleoside hydrolase INQ46_19070 PF02401 LytB protein INQ46_19075 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase INQ46_19080 PF01252 Signal peptidase (SPase) II INQ46_19085 PF08264 Anticodon-binding domain of tRNA INQ46_19085 PF00133 tRNA synthetases class I (I, L, M and V) INQ46_19085 PF06827 Zinc finger found in FPG and IleRS INQ46_19090 PF01687 Riboflavin kinase INQ46_19090 PF06574 FAD synthetase INQ46_19095 PF10837 Protein of unknown function (DUF2575) INQ46_19100 PF01649 Ribosomal protein S20 INQ46_19110 PF01055 Glycosyl hydrolases family 31 INQ46_19115 PF03466 LysR substrate binding domain INQ46_19115 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ46_19120 PF06965 Na+/H+ antiporter 1 INQ46_19135 PF13186 Iron-sulfur cluster-binding domain INQ46_19135 PF04055 Radical SAM superfamily INQ46_19140 PF16385 Domain of unknown function INQ46_19140 PF00884 Sulfatase INQ46_19170 PF03466 LysR substrate binding domain INQ46_19170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ46_19175 PF01556 DnaJ C terminal domain INQ46_19175 PF00226 DnaJ domain INQ46_19175 PF00684 DnaJ central domain INQ46_19180 PF00012 Hsp70 protein INQ46_19185 PF10807 Protein of unknown function (DUF2541) INQ46_19190 PF13099 Domain of unknown function (DUF3944) INQ46_19190 PF03981 Ubiquinol-cytochrome C chaperone INQ46_19195 PF01184 GPR1/FUN34/yaaH family INQ46_19200 PF00994 Probable molybdopterin binding domain INQ46_19205 PF00923 Transaldolase/Fructose-6-phosphate aldolase INQ46_19210 PF01235 Sodium:alanine symporter family INQ46_19215 PF03883 Peroxide stress protein YaaA INQ46_19220 PF00291 Pyridoxal-phosphate dependent enzyme INQ46_19220 PF14821 Threonine synthase N terminus INQ46_19225 PF08544 GHMP kinases C terminal INQ46_19225 PF00288 GHMP kinases N terminal domain INQ46_19230 PF00696 Amino acid kinase family INQ46_19230 PF03447 Homoserine dehydrogenase, NAD binding domain INQ46_19230 PF00742 Homoserine dehydrogenase INQ46_19230 PF01842 ACT domain INQ46_19230 PF13840 ACT domain INQ46_19235 PF08254 Threonine leader peptide INQ46_19240 PF00588 SpoU rRNA Methylase family INQ46_19250 PF00072 Response regulator receiver domain INQ46_19250 PF00486 Transcriptional regulatory protein, C terminal INQ46_19260 PF15977 Winged helix-turn-helix DNA binding INQ46_19270 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain INQ46_19270 PF02753 Pili assembly chaperone PapD, C-terminal domain INQ46_19290 PF06123 Inner membrane protein CreD INQ46_19300 PF00486 Transcriptional regulatory protein, C terminal INQ46_19300 PF00072 Response regulator receiver domain INQ46_19305 PF05981 CreA protein INQ46_19310 PF12833 Helix-turn-helix domain INQ46_19310 PF06445 GyrI-like small molecule binding domain INQ46_19315 PF00300 Histidine phosphatase superfamily (branch 1) INQ46_19320 PF01931 Protein of unknown function DUF84 INQ46_19325 PF01371 Trp repressor protein INQ46_19330 PF14718 Soluble lytic murein transglycosylase L domain INQ46_19330 PF01464 Transglycosylase SLT domain INQ46_19335 PF00005 ABC transporter INQ46_19335 PF12848 ABC transporter INQ46_19340 PF01381 Helix-turn-helix INQ46_19340 PF13521 AAA domain INQ46_19345 PF18073 Rubredoxin metal binding domain INQ46_19350 PF18429 Domain of unknown function (DUF5609) INQ46_19355 PF10144 Bacterial virulence factor haemolysin INQ46_19360 PF03099 Biotin/lipoate A/B protein ligase family INQ46_19360 PF10437 Bacterial lipoate protein ligase C-terminus INQ46_19370 PF01048 Phosphorylase superfamily INQ46_19375 PF01676 Metalloenzyme superfamily INQ46_19380 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain INQ46_19380 PF02885 Glycosyl transferase family, helical bundle domain INQ46_19380 PF00591 Glycosyl transferase family, a/b domain INQ46_19385 PF01791 DeoC/LacD family aldolase INQ46_19390 PF11230 Protein of unknown function (DUF3029) INQ46_19395 PF04055 Radical SAM superfamily INQ46_19400 PF01026 TatD related DNase INQ46_19405 PF01734 Patatin-like phospholipase INQ46_19410 PF07043 Protein of unknown function (DUF1328) INQ46_19415 PF04972 BON domain INQ46_19420 PF03144 Elongation factor Tu domain 2 INQ46_19420 PF16658 Class II release factor RF3, C-terminal domain INQ46_19420 PF00009 Elongation factor Tu GTP binding domain INQ46_19425 PF13419 Haloacid dehalogenase-like hydrolase INQ46_19430 PF00583 Acetyltransferase (GNAT) family INQ46_19435 PF03603 DNA polymerase III psi subunit INQ46_19440 PF05175 Methyltransferase small domain INQ46_19440 PF08468 Methyltransferase small domain N-terminal INQ46_19460 PF07256 Protein of unknown function (DUF1435) INQ46_19465 PF00990 Diguanylate cyclase, GGDEF domain INQ46_19465 PF05230 MASE2 domain INQ46_19470 PF06276 Ferric iron reductase FhuF-like transporter INQ46_19470 PF11575 FhuF 2Fe-2S C-terminal domain INQ46_19475 PF04073 Aminoacyl-tRNA editing domain INQ46_19480 PF00196 Bacterial regulatory proteins, luxR family INQ46_19485 PF00196 Bacterial regulatory proteins, luxR family INQ46_19490 PF06738 Putative threonine/serine exporter INQ46_19495 PF12821 Threonine/Serine exporter, ThrE INQ46_19500 PF17948 DnaT DNA-binding domain INQ46_19505 PF01695 IstB-like ATP binding protein INQ46_19510 PF10696 Protein of unknown function (DUF2501) INQ46_19515 PF00884 Sulfatase INQ46_19520 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain INQ46_19520 PF02203 Tar ligand binding domain homologue INQ46_19520 PF00672 HAMP domain INQ46_19525 PF13722 5TM C-terminal transporter carbon starvation CstA INQ46_19525 PF02554 Carbon starvation protein CstA INQ46_19530 PF04328 Selenoprotein, putative INQ46_19535 PF07683 Cobalamin synthesis protein cobW C-terminal domain INQ46_19535 PF02492 CobW/HypB/UreG, nucleotide-binding domain INQ46_19550 PF04471 Restriction endonuclease INQ46_19550 PF14338 Mrr N-terminal domain INQ46_19555 PF04851 Type III restriction enzyme, res subunit INQ46_19555 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) INQ46_19555 PF00271 Helicase conserved C-terminal domain INQ46_19555 PF08463 EcoEI R protein C-terminal INQ46_19560 PF02384 N-6 DNA Methylase INQ46_19580 PF08845 Toxin SymE, type I toxin-antitoxin system INQ46_19600 PF00171 Aldehyde dehydrogenase family INQ46_19605 PF04754 Putative transposase, YhgA-like INQ46_19610 PF07690 Major Facilitator Superfamily INQ46_19615 PF04286 Protein of unknown function (DUF445) INQ46_19620 PF06779 Uncharacterised MFS-type transporter YbfB INQ46_19625 PF07670 Nucleoside recognition INQ46_19630 PF07670 Nucleoside recognition INQ46_19635 PF01979 Amidohydrolase family INQ46_19640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ46_19640 PF03466 LysR substrate binding domain INQ46_19645 PF01177 Asp/Glu/Hydantoin racemase INQ46_19655 PF00579 tRNA synthetases class I (W and Y) INQ46_19660 PF07729 FCD domain INQ46_19660 PF00392 Bacterial regulatory proteins, gntR family INQ46_19680 PF02537 CrcB-like protein, Camphor Resistance (CrcB) INQ46_19680 PF03625 Domain of unknown function DUF302 INQ46_19695 PF09857 Putative toxin of bacterial toxin-antitoxin pair INQ46_19700 PF13847 Methyltransferase domain INQ46_19705 PF01709 Transcriptional regulator INQ46_19725 PF00107 Zinc-binding dehydrogenase INQ46_19725 PF08240 Alcohol dehydrogenase GroES-like domain INQ46_19730 PF01202 Shikimate kinase INQ46_19735 PF00107 Zinc-binding dehydrogenase INQ46_19735 PF08240 Alcohol dehydrogenase GroES-like domain INQ46_19740 PF00106 short chain dehydrogenase INQ46_19745 PF02447 GntP family permease INQ46_19750 PF00356 Bacterial regulatory proteins, lacI family INQ46_19755 PF03739 Lipopolysaccharide export system permease LptF/LptG INQ46_19760 PF03739 Lipopolysaccharide export system permease LptF/LptG INQ46_19765 PF00883 Cytosol aminopeptidase family, catalytic domain INQ46_19765 PF02789 Cytosol aminopeptidase family, N-terminal domain INQ46_19770 PF04364 DNA polymerase III chi subunit, HolC INQ46_19775 PF08264 Anticodon-binding domain of tRNA INQ46_19775 PF00133 tRNA synthetases class I (I, L, M and V) INQ46_19775 PF10458 Valyl tRNA synthetase tRNA binding arm INQ46_19780 PF05987 Bacterial protein of unknown function (DUF898) INQ46_19785 PF00583 Acetyltransferase (GNAT) family INQ46_19790 PF12276 Protein of unknown function (DUF3617) INQ46_19795 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) INQ46_19800 PF06877 Regulator of ribonuclease activity B INQ46_19805 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain INQ46_19805 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain INQ46_19810 PF04074 YhcH/YjgK/YiaL INQ46_19820 PF00696 Amino acid kinase family INQ46_19825 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain INQ46_19825 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain INQ46_19830 PF03606 C4-dicarboxylate anaerobic carrier INQ46_19835 PF01316 Arginine repressor, DNA binding domain INQ46_19835 PF02863 Arginine repressor, C-terminal domain INQ46_19845 PF08052 PyrBI operon leader peptide INQ46_19850 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain INQ46_19850 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain INQ46_19855 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain INQ46_19855 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain INQ46_19860 PF01042 Endoribonuclease L-PSP INQ46_19870 PF00690 Cation transporter/ATPase, N-terminus INQ46_19870 PF00689 Cation transporting ATPase, C-terminus INQ46_19875 PF17059 MgtA leader peptide INQ46_19880 PF00356 Bacterial regulatory proteins, lacI family INQ46_19885 PF02378 Phosphotransferase system, EIIC INQ46_19885 PF00367 phosphotransferase system, EIIB INQ46_19890 PF00128 Alpha amylase, catalytic domain INQ46_19890 PF11941 Domain of unknown function (DUF3459) INQ46_19895 PF13597 Anaerobic ribonucleoside-triphosphate reductase INQ46_19895 PF03477 ATP cone domain INQ46_19905 PF05016 ParE toxin of type II toxin-antitoxin system, parDE INQ46_19910 PF04221 RelB antitoxin INQ46_19915 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 INQ46_19915 PF05043 Mga helix-turn-helix domain INQ46_19915 PF08279 HTH domain INQ46_19915 PF00874 PRD domain INQ46_19920 PF07071 KDGP aldolase INQ46_19925 PF03841 L-seryl-tRNA selenium transferase INQ46_19930 PF01979 Amidohydrolase family INQ46_19960 PF07361 Cytochrome b562 INQ46_19965 PF01523 Putative modulator of DNA gyrase INQ46_19970 PF04751 Protein of unknown function (DUF615) INQ46_19975 PF08245 Mur ligase middle domain INQ46_19975 PF02875 Mur ligase family, glutamate ligase domain INQ46_19975 PF01225 Mur ligase family, catalytic domain INQ46_19980 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain INQ46_19985 PF00719 Inorganic pyrophosphatase INQ46_19995 PF07690 Major Facilitator Superfamily INQ46_20000 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like INQ46_20005 PF04357 TamB, inner membrane protein subunit of TAM complex INQ46_20010 PF01103 Surface antigen INQ46_20010 PF07244 Surface antigen variable number repeat INQ46_20010 PF17243 POTRA domain TamA domain 1 INQ46_20015 PF01625 Peptide methionine sulfoxide reductase INQ46_20020 PF01595 Cyclin M transmembrane N-terminal domain INQ46_20020 PF00571 CBS domain INQ46_20020 PF03471 Transporter associated domain INQ46_20025 PF06526 Protein of unknown function (DUF1107) INQ46_20030 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) INQ46_20035 PF00459 Inositol monophosphatase family INQ46_20040 PF02872 5'-nucleotidase, C-terminal domain INQ46_20040 PF00149 Calcineurin-like phosphoesterase INQ46_20045 PF01638 HxlR-like helix-turn-helix INQ46_20050 PF05368 NmrA-like family INQ46_20055 PF00892 EamA-like transporter family INQ46_20060 PF01814 Hemerythrin HHE cation binding domain INQ46_20060 PF04405 Domain of Unknown function (DUF542) INQ46_20075 PF00324 Amino acid permease INQ46_20080 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase INQ46_20080 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase INQ46_20085 PF04225 Opacity-associated protein A LysM-like domain INQ46_20085 PF08525 Opacity-associated protein A N-terminal motif INQ46_20090 PF17938 Tetracyclin repressor-like, C-terminal domain INQ46_20110 PF01144 Coenzyme A transferase INQ46_20115 PF02910 Fumarate reductase flavoprotein C-term INQ46_20115 PF00890 FAD binding domain INQ46_20120 PF07690 Major Facilitator Superfamily INQ46_20130 PF01281 Ribosomal protein L9, N-terminal domain INQ46_20130 PF03948 Ribosomal protein L9, C-terminal domain INQ46_20135 PF01084 Ribosomal protein S18 INQ46_20140 PF00436 Single-strand binding protein family INQ46_20145 PF01250 Ribosomal protein S6 INQ46_20155 PF07338 Protein of unknown function (DUF1471) INQ46_20160 PF00596 Class II Aldolase and Adducin N-terminal domain INQ46_20165 PF01261 Xylose isomerase-like TIM barrel INQ46_20170 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family INQ46_20175 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 INQ46_20180 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit INQ46_20185 PF03611 PTS system sugar-specific permease component INQ46_20195 PF00455 DeoR C terminal sensor domain INQ46_20195 PF08220 DeoR-like helix-turn-helix domain INQ46_20200 PF00326 Prolyl oligopeptidase family INQ46_20205 PF07338 Protein of unknown function (DUF1471) INQ46_20210 PF07338 Protein of unknown function (DUF1471) INQ46_20215 PF00441 Acyl-CoA dehydrogenase, C-terminal domain INQ46_20215 PF02770 Acyl-CoA dehydrogenase, middle domain INQ46_20215 PF18158 Adaptive response protein AidB N-terminal domain INQ46_20220 PF03738 Glutathionylspermidine synthase preATP-grasp INQ46_20225 PF06693 Protein of unknown function (DUF1190) INQ46_20235 PF10679 Protein of unknown function (DUF2491) INQ46_20240 PF04012 PspA/IM30 family INQ46_20245 PF09938 Uncharacterized protein conserved in bacteria (DUF2170) INQ46_20250 PF08032 RNA 2'-O ribose methyltransferase substrate binding INQ46_20250 PF00588 SpoU rRNA Methylase family INQ46_20255 PF00575 S1 RNA binding domain INQ46_20255 PF17876 Cold shock domain INQ46_20255 PF00773 RNB domain INQ46_20255 PF08206 Ribonuclease B OB domain INQ46_20255 PF08461 Ribonuclease R winged-helix domain INQ46_20260 PF02082 Transcriptional regulator INQ46_20265 PF00709 Adenylosuccinate synthetase INQ46_20270 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) INQ46_20275 PF01145 SPFH domain / Band 7 family INQ46_20280 PF12221 Bacterial membrane protein N terminal INQ46_20280 PF01145 SPFH domain / Band 7 family INQ46_20285 PF01926 50S ribosome-binding GTPase INQ46_20285 PF13167 GTP-binding GTPase N-terminal INQ46_20285 PF16360 GTP-binding GTPase Middle Region INQ46_20290 PF17209 Hfq protein INQ46_20300 PF08676 MutL C terminal dimerisation domain INQ46_20300 PF01119 DNA mismatch repair protein, C-terminal domain INQ46_20305 PF01520 N-acetylmuramoyl-L-alanine amidase INQ46_20310 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE INQ46_20315 PF01256 Carbohydrate kinase INQ46_20315 PF03853 YjeF-related protein N-terminus INQ46_20320 PF08331 Domain of unknown function (DUF1730) INQ46_20340 PF00497 Bacterial extracellular solute-binding proteins, family 3 INQ46_20345 PF00929 Exonuclease INQ46_20350 PF03193 RsgA GTPase INQ46_20355 PF02666 Phosphatidylserine decarboxylase INQ46_20360 PF12794 Mechanosensitive ion channel inner membrane domain 1 INQ46_20360 PF12795 Mechanosensitive ion channel porin domain INQ46_20360 PF00924 Mechanosensitive ion channel INQ46_20370 PF13520 Amino acid permease INQ46_20375 PF00152 tRNA synthetases class II (D, K and N) INQ46_20380 PF00890 FAD binding domain INQ46_20380 PF02910 Fumarate reductase flavoprotein C-term INQ46_20385 PF13183 4Fe-4S dicluster domain INQ46_20385 PF13085 2Fe-2S iron-sulfur cluster binding domain INQ46_20390 PF02300 Fumarate reductase subunit C INQ46_20395 PF02313 Fumarate reductase subunit D INQ46_20400 PF08212 Lipocalin-like domain INQ46_20405 PF00893 Small Multidrug Resistance protein INQ46_20410 PF00196 Bacterial regulatory proteins, luxR family INQ46_20415 PF08085 Entericidin EcnA/B family INQ46_20420 PF08085 Entericidin EcnA/B family INQ46_20425 PF09285 Elongation factor P, C-terminal INQ46_20425 PF08207 Elongation factor P (EF-P) KOW-like domain INQ46_20425 PF01132 Elongation factor P (EF-P) OB domain INQ46_20430 PF04055 Radical SAM superfamily INQ46_20435 PF15922 YjeJ-like INQ46_20440 PF13698 Domain of unknown function (DUF4156) INQ46_20445 PF00118 TCP-1/cpn60 chaperonin family INQ46_20450 PF00166 Chaperonin 10 Kd subunit INQ46_20455 PF13520 Amino acid permease INQ46_20460 PF04186 FxsA cytoplasmic membrane protein INQ46_20465 PF10415 Fumarase C C-terminus INQ46_20465 PF00206 Lyase INQ46_20470 PF03605 Anaerobic c4-dicarboxylate membrane transporter INQ46_20475 PF03091 CutA1 divalent ion tolerance protein INQ46_20480 PF02683 Cytochrome C biogenesis protein transmembrane region INQ46_20480 PF11412 Disulphide bond corrector protein DsbC INQ46_20500 PF01569 PAP2 superfamily INQ46_20520 PF12833 Helix-turn-helix domain INQ46_20525 PF00072 Response regulator receiver domain INQ46_20525 PF00196 Bacterial regulatory proteins, luxR family INQ46_20535 PF06977 SdiA-regulated INQ46_20545 PF02613 Nitrate reductase delta subunit INQ46_20550 PF04976 DMSO reductase anchor subunit (DmsC) INQ46_20555 PF12800 4Fe-4S binding domain INQ46_20555 PF13247 4Fe-4S dicluster domain INQ46_20560 PF00384 Molybdopterin oxidoreductase INQ46_20560 PF01568 Molydopterin dinucleotide binding domain INQ46_20560 PF04879 Molybdopterin oxidoreductase Fe4S4 domain INQ46_20565 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain INQ46_20565 PF17203 Single cache domain 3 INQ46_20565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase INQ46_20565 PF00989 PAS fold INQ46_20570 PF00072 Response regulator receiver domain INQ46_20580 PF03605 Anaerobic c4-dicarboxylate membrane transporter INQ46_20585 PF05681 Fumarate hydratase (Fumerase) INQ46_20585 PF05683 Fumarase C-terminus INQ46_20600 PF12833 Helix-turn-helix domain INQ46_20605 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain INQ46_20605 PF01276 Orn/Lys/Arg decarboxylase, major domain INQ46_20605 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain INQ46_20610 PF12833 Helix-turn-helix domain INQ46_20615 PF13520 Amino acid permease INQ46_20620 PF00884 Sulfatase INQ46_20620 PF08019 Phosphoethanolamine transferase EptA/EptB INQ46_20625 PF00486 Transcriptional regulatory protein, C terminal INQ46_20625 PF00072 Response regulator receiver domain INQ46_20630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase INQ46_20630 PF00512 His Kinase A (phospho-acceptor) domain INQ46_20640 PF00083 Sugar (and other) transporter INQ46_20640 PF08946 Osmosensory transporter coiled coil INQ46_20645 PF03831 PhnA domain INQ46_20645 PF08274 PhnA Zinc-Ribbon INQ46_20650 PF06983 3-demethylubiquinone-9 3-methyltransferase INQ46_20655 PF00583 Acetyltransferase (GNAT) family INQ46_20670 PF08238 Sel1 repeat INQ46_20675 PF00375 Sodium:dicarboxylate symporter family INQ46_20685 PF01578 Cytochrome C assembly protein INQ46_20685 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal INQ46_20690 PF03916 Polysulphide reductase, NrfD INQ46_20695 PF13247 4Fe-4S dicluster domain INQ46_20695 PF00037 4Fe-4S binding domain INQ46_20700 PF09699 Doubled CXXCH motif (Paired_CXXCH_1) INQ46_20700 PF13435 Cytochrome c554 and c-prime INQ46_20705 PF02335 Cytochrome c552 INQ46_20710 PF00501 AMP-binding enzyme INQ46_20710 PF13193 AMP-binding enzyme C-terminal domain INQ46_20710 PF16177 Acetyl-coenzyme A synthetase N-terminus INQ46_20715 PF04341 Protein of unknown function, DUF485 INQ46_20720 PF00474 Sodium:solute symporter family INQ46_20725 PF04172 LrgB-like family INQ46_20730 PF03788 LrgA family INQ46_20735 PF03466 LysR substrate binding domain INQ46_20735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ46_20740 PF00999 Sodium/hydrogen exchanger family INQ46_20745 PF00860 Permease family INQ46_20755 PF09278 MerR, DNA binding INQ46_20755 PF00376 MerR family regulatory protein INQ46_20760 PF12833 Helix-turn-helix domain INQ46_20765 PF00563 EAL domain INQ46_20765 PF12792 CSS motif domain associated with EAL INQ46_20770 PF15940 Family of unknown function INQ46_20775 PF00005 ABC transporter INQ46_20775 PF00664 ABC transporter transmembrane region INQ46_20805 PF00436 Single-strand binding protein family INQ46_20810 PF17760 UvrA interaction domain INQ46_20810 PF17755 UvrA DNA-binding domain INQ46_20810 PF00005 ABC transporter INQ46_20825 PF04237 YjbR INQ46_20830 PF01894 Uncharacterised protein family UPF0047 INQ46_20835 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) INQ46_20840 PF00155 Aminotransferase class I and II INQ46_20845 PF01168 Alanine racemase, N-terminal domain INQ46_20845 PF00842 Alanine racemase, C-terminal domain INQ46_20850 PF03796 DnaB-like helicase C terminal domain INQ46_20850 PF00772 DnaB-like helicase N terminal domain INQ46_20855 PF00107 Zinc-binding dehydrogenase INQ46_20855 PF08240 Alcohol dehydrogenase GroES-like domain INQ46_20860 PF09583 Phage shock protein G (Phageshock_PspG) INQ46_20865 PF01207 Dihydrouridine synthase (Dus) INQ46_20875 PF01475 Ferric uptake regulator family INQ46_20880 PF05532 CsbD-like INQ46_20890 PF01554 MatE INQ46_20895 PF01726 LexA DNA binding domain INQ46_20895 PF00717 Peptidase S24-like INQ46_20900 PF01219 Prokaryotic diacylglycerol kinase INQ46_20905 PF01553 Acyltransferase INQ46_20910 PF01040 UbiA prenyltransferase family INQ46_20915 PF04345 Chorismate lyase INQ46_20920 PF07148 Maltose operon periplasmic protein precursor (MalM) INQ46_20925 PF02264 LamB porin INQ46_20930 PF00005 ABC transporter INQ46_20930 PF17912 MalK OB fold domain INQ46_20935 PF01547 Bacterial extracellular solute-binding protein INQ46_20940 PF14785 Maltose transport system permease protein MalF P2 domain INQ46_20940 PF00528 Binding-protein-dependent transport system inner membrane component INQ46_20945 PF00528 Binding-protein-dependent transport system inner membrane component INQ46_20950 PF06146 Phosphate-starvation-inducible E INQ46_20955 PF06082 Exopolysaccharide biosynthesis protein YbjH INQ46_20960 PF06251 Capsule biosynthesis GfcC INQ46_20965 PF11102 Group 4 capsule polysaccharide lipoprotein gfcB, YjbF INQ46_20975 PF00342 Phosphoglucose isomerase INQ46_20980 PF00696 Amino acid kinase family INQ46_20980 PF01842 ACT domain INQ46_21000 PF08220 DeoR-like helix-turn-helix domain INQ46_21000 PF00455 DeoR C terminal sensor domain INQ46_21005 PF11656 YjbD family (DUF3811) INQ46_21010 PF00849 RNA pseudouridylate synthase INQ46_21010 PF01479 S4 domain INQ46_21015 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) INQ46_21025 PF03575 Peptidase family S51 INQ46_21030 PF02690 Na+/Pi-cotransporter INQ46_21035 PF02574 Homocysteine S-methyltransferase INQ46_21035 PF00809 Pterin binding enzyme INQ46_21035 PF02965 Vitamin B12 dependent methionine synthase, activation domain INQ46_21035 PF02607 B12 binding domain INQ46_21035 PF02310 B12 binding domain INQ46_21040 PF01614 Bacterial transcriptional regulator INQ46_21040 PF09339 IclR helix-turn-helix domain INQ46_21045 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) INQ46_21050 PF00463 Isocitrate lyase family INQ46_21055 PF01274 Malate synthase INQ46_21060 PF04204 Homoserine O-succinyltransferase INQ46_21065 PF13673 Acetyltransferase (GNAT) domain INQ46_21090 PF02142 MGS-like domain INQ46_21090 PF01808 AICARFT/IMPCHase bienzyme INQ46_21095 PF02843 Phosphoribosylglycinamide synthetase, C domain INQ46_21095 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain INQ46_21095 PF02844 Phosphoribosylglycinamide synthetase, N domain INQ46_21100 PF00158 Sigma-54 interaction domain INQ46_21100 PF00072 Response regulator receiver domain INQ46_21100 PF02954 Bacterial regulatory protein, Fis family INQ46_21105 PF00512 His Kinase A (phospho-acceptor) domain INQ46_21105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase INQ46_21110 PF13801 Heavy-metal resistance INQ46_21115 PF07356 Protein of unknown function (DUF1481) INQ46_21120 PF00216 Bacterial DNA-binding protein INQ46_21125 PF04222 Protein of unknown function (DUF416) INQ46_21130 PF04493 Endonuclease V INQ46_21135 PF01208 Uroporphyrinogen decarboxylase (URO-D) INQ46_21140 PF00293 NUDIX domain INQ46_21140 PF09297 NADH pyrophosphatase zinc ribbon domain INQ46_21145 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ INQ46_21150 PF01964 Radical SAM ThiC family INQ46_21150 PF13667 ThiC-associated domain INQ46_21155 PF02581 Thiamine monophosphate synthase INQ46_21160 PF00899 ThiF family INQ46_21165 PF02597 ThiS family INQ46_21170 PF05690 Thiazole biosynthesis protein ThiG INQ46_21175 PF04055 Radical SAM superfamily INQ46_21175 PF06968 Biotin and Thiamin Synthesis associated domain INQ46_21200 PF04998 RNA polymerase Rpb1, domain 5 INQ46_21200 PF05000 RNA polymerase Rpb1, domain 4 INQ46_21200 PF04997 RNA polymerase Rpb1, domain 1 INQ46_21200 PF04983 RNA polymerase Rpb1, domain 3 INQ46_21200 PF00623 RNA polymerase Rpb1, domain 2 INQ46_21205 PF04565 RNA polymerase Rpb2, domain 3 INQ46_21205 PF10385 RNA polymerase beta subunit external 1 domain INQ46_21205 PF04563 RNA polymerase beta subunit INQ46_21205 PF00562 RNA polymerase Rpb2, domain 6 INQ46_21205 PF04560 RNA polymerase Rpb2, domain 7 INQ46_21205 PF04561 RNA polymerase Rpb2, domain 2 INQ46_21210 PF16320 Ribosomal protein L7/L12 dimerisation domain INQ46_21210 PF00542 Ribosomal protein L7/L12 C-terminal domain INQ46_21215 PF00466 Ribosomal protein L10 INQ46_21220 PF00687 Ribosomal protein L1p/L10e family INQ46_21225 PF00298 Ribosomal protein L11, RNA binding domain INQ46_21225 PF03946 Ribosomal protein L11, N-terminal domain INQ46_21230 PF00467 KOW motif INQ46_21230 PF02357 Transcription termination factor nusG INQ46_21235 PF00584 SecE/Sec61-gamma subunits of protein translocation complex INQ46_21240 PF00009 Elongation factor Tu GTP binding domain INQ46_21240 PF03144 Elongation factor Tu domain 2 INQ46_21240 PF03143 Elongation factor Tu C-terminal domain INQ46_21270 PF00485 Phosphoribulokinase / Uridine kinase family INQ46_21275 PF02237 Biotin protein ligase C terminal domain INQ46_21275 PF08279 HTH domain INQ46_21275 PF03099 Biotin/lipoate A/B protein ligase family INQ46_21280 PF01565 FAD binding domain INQ46_21280 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain INQ46_21285 PF00701 Dihydrodipicolinate synthetase family INQ46_21290 PF03812 2-keto-3-deoxygluconate permease INQ46_21295 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus INQ46_21295 PF08666 SAF domain INQ46_21325 PF09339 IclR helix-turn-helix domain INQ46_21325 PF01614 Bacterial transcriptional regulator INQ46_21355 PF01177 Asp/Glu/Hydantoin racemase INQ46_21360 PF00593 TonB dependent receptor INQ46_21360 PF07715 TonB-dependent Receptor Plug Domain INQ46_21365 PF05958 tRNA (Uracil-5-)-methyltransferase INQ46_21370 PF07226 Protein of unknown function (DUF1422) INQ46_21375 PF00440 Bacterial regulatory proteins, tetR family INQ46_21380 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain INQ46_21380 PF07992 Pyridine nucleotide-disulphide oxidoreductase INQ46_21385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ46_21385 PF03466 LysR substrate binding domain INQ46_21390 PF00206 Lyase INQ46_21390 PF14698 Argininosuccinate lyase C-terminal INQ46_21395 PF00696 Amino acid kinase family INQ46_21400 PF01118 Semialdehyde dehydrogenase, NAD binding domain INQ46_21400 PF02774 Semialdehyde dehydrogenase, dimerisation domain INQ46_21405 PF01546 Peptidase family M20/M25/M40 INQ46_21405 PF07687 Peptidase dimerisation domain INQ46_21410 PF00311 Phosphoenolpyruvate carboxylase INQ46_21415 PF00884 Sulfatase INQ46_21420 PF12833 Helix-turn-helix domain INQ46_21425 PF00923 Transaldolase/Fructose-6-phosphate aldolase INQ46_21430 PF00465 Iron-containing alcohol dehydrogenase INQ46_21435 PF00141 Peroxidase INQ46_21440 PF02219 Methylenetetrahydrofolate reductase INQ46_21445 PF00149 Calcineurin-like phosphoesterase INQ46_21445 PF17936 Bacterial Ig domain INQ46_21445 PF02872 5'-nucleotidase, C-terminal domain INQ46_21460 PF00742 Homoserine dehydrogenase INQ46_21460 PF00696 Amino acid kinase family INQ46_21460 PF03447 Homoserine dehydrogenase, NAD binding domain INQ46_21465 PF01053 Cys/Met metabolism PLP-dependent enzyme INQ46_21470 PF01340 Met Apo-repressor, MetJ INQ46_21475 PF05935 Arylsulfotransferase (ASST) INQ46_21475 PF17425 Arylsulfotransferase Ig-like domain INQ46_21485 PF01197 Ribosomal protein L31 INQ46_21490 PF00270 DEAD/DEAH box helicase INQ46_21490 PF17764 3′ DNA-binding domain (3′BD) INQ46_21490 PF18074 Primosomal protein N C-terminal domain INQ46_21490 PF18319 PriA DNA helicase Cys-rich region (CRR) domain INQ46_21490 PF00271 Helicase conserved C-terminal domain INQ46_21495 PF00356 Bacterial regulatory proteins, lacI family INQ46_21500 PF05036 Sporulation related domain INQ46_21505 PF00227 Proteasome subunit INQ46_21510 PF00004 ATPase family associated with various cellular activities (AAA) INQ46_21510 PF07724 AAA domain (Cdc48 subfamily) INQ46_21510 PF10431 C-terminal, D2-small domain, of ClpB protein INQ46_21515 PF01040 UbiA prenyltransferase family INQ46_21520 PF03737 Aldolase/RraA INQ46_21525 PF06005 Cell division protein ZapB INQ46_21530 PF00230 Major intrinsic protein INQ46_21535 PF00370 FGGY family of carbohydrate kinases, N-terminal domain INQ46_21535 PF02782 FGGY family of carbohydrate kinases, C-terminal domain INQ46_21540 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded INQ46_21545 PF00175 Oxidoreductase NAD-binding domain INQ46_21545 PF00970 Oxidoreductase FAD-binding domain INQ46_21550 PF05656 Protein of unknown function (DUF805) INQ46_21555 PF07305 Protein of unknown function (DUF1454) INQ46_21560 PF00121 Triosephosphate isomerase INQ46_21565 PF00834 Ribulose-phosphate 3 epimerase family INQ46_21570 PF03992 Antibiotic biosynthesis monooxygenase INQ46_21575 PF01791 DeoC/LacD family aldolase INQ46_21580 PF13407 Periplasmic binding protein domain INQ46_21585 PF02653 Branched-chain amino acid transport system / permease component INQ46_21590 PF02653 Branched-chain amino acid transport system / permease component INQ46_21595 PF00005 ABC transporter INQ46_21600 PF04198 Putative sugar-binding domain INQ46_21605 PF00370 FGGY family of carbohydrate kinases, N-terminal domain INQ46_21605 PF02782 FGGY family of carbohydrate kinases, C-terminal domain INQ46_21625 PF00392 Bacterial regulatory proteins, gntR family INQ46_21625 PF00155 Aminotransferase class I and II INQ46_21635 PF00294 pfkB family carbohydrate kinase INQ46_21645 PF02611 CDP-diacylglycerol pyrophosphatase INQ46_21655 PF00365 Phosphofructokinase INQ46_21660 PF01545 Cation efflux family INQ46_21660 PF16916 Dimerisation domain of Zinc Transporter INQ46_21665 PF07813 LTXXQ motif family protein INQ46_21670 PF00072 Response regulator receiver domain INQ46_21670 PF00486 Transcriptional regulatory protein, C terminal INQ46_21675 PF00672 HAMP domain INQ46_21675 PF16527 Two-component sensor protein CpxA, periplasmic domain INQ46_21675 PF00512 His Kinase A (phospho-acceptor) domain INQ46_21675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase INQ46_21685 PF03475 3-alpha domain INQ46_21685 PF03473 MOSC domain INQ46_21690 PF02777 Iron/manganese superoxide dismutases, C-terminal domain INQ46_21690 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain INQ46_21695 PF03480 Bacterial extracellular solute-binding protein, family 7 INQ46_21700 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component INQ46_21705 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component INQ46_21710 PF06178 Oligogalacturonate-specific porin protein (KdgM) INQ46_21715 PF06379 L-rhamnose-proton symport protein (RhaT) INQ46_21720 PF02311 AraC-like ligand binding domain INQ46_21720 PF12833 Helix-turn-helix domain INQ46_21725 PF12833 Helix-turn-helix domain INQ46_21725 PF02311 AraC-like ligand binding domain INQ46_21730 PF00370 FGGY family of carbohydrate kinases, N-terminal domain INQ46_21730 PF02782 FGGY family of carbohydrate kinases, C-terminal domain INQ46_21735 PF06134 L-rhamnose isomerase (RhaA) INQ46_21740 PF00596 Class II Aldolase and Adducin N-terminal domain INQ46_21745 PF00465 Iron-containing alcohol dehydrogenase INQ46_21750 PF05336 L-rhamnose mutarotase INQ46_21760 PF03591 AzlC protein INQ46_21770 PF12889 Protein of unknown function (DUF3829) INQ46_21775 PF02634 FdhD/NarQ family INQ46_21785 PF13247 4Fe-4S dicluster domain INQ46_21785 PF09163 Formate dehydrogenase N, transmembrane INQ46_21790 PF01292 Prokaryotic cytochrome b561 INQ46_21795 PF04216 Protein involved in formate dehydrogenase formation INQ46_21805 PF06296 RelE toxin of RelE / RelB toxin-antitoxin system INQ46_21810 PF07859 alpha/beta hydrolase fold INQ46_21815 PF09500 Putative thioesterase (yiiD_Cterm) INQ46_21815 PF00583 Acetyltransferase (GNAT) family INQ46_21820 PF02580 D-Tyr-tRNA(Tyr) deacylase INQ46_21825 PF03631 Virulence factor BrkB INQ46_21830 PF13419 Haloacid dehalogenase-like hydrolase INQ46_21835 PF00455 DeoR C terminal sensor domain INQ46_21835 PF08220 DeoR-like helix-turn-helix domain INQ46_21845 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase INQ46_21845 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase INQ46_21850 PF01791 DeoC/LacD family aldolase INQ46_21860 PF01263 Aldose 1-epimerase INQ46_21865 PF01055 Glycosyl hydrolases family 31 INQ46_21895 PF06178 Oligogalacturonate-specific porin protein (KdgM) INQ46_21915 PF04055 Radical SAM superfamily INQ46_21930 PF00009 Elongation factor Tu GTP binding domain INQ46_21930 PF00679 Elongation factor G C-terminus INQ46_21930 PF03144 Elongation factor Tu domain 2 INQ46_21935 PF00120 Glutamine synthetase, catalytic domain INQ46_21935 PF03951 Glutamine synthetase, beta-Grasp domain INQ46_21940 PF00512 His Kinase A (phospho-acceptor) domain INQ46_21940 PF00989 PAS fold INQ46_21940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase INQ46_21945 PF00158 Sigma-54 interaction domain INQ46_21945 PF00072 Response regulator receiver domain INQ46_21945 PF02954 Bacterial regulatory protein, Fis family INQ46_21955 PF04055 Radical SAM superfamily INQ46_21955 PF06969 HemN C-terminal domain INQ46_21960 PF04220 Der GTPase activator (YihI) INQ46_21970 PF01926 50S ribosome-binding GTPase INQ46_21975 PF01367 5'-3' exonuclease, C-terminal SAM fold INQ46_21975 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain INQ46_21975 PF00476 DNA polymerase family A INQ46_21975 PF01612 3'-5' exonuclease INQ46_21985 PF01323 DSBA-like thioredoxin domain INQ46_21990 PF01636 Phosphotransferase enzyme family INQ46_21995 PF06288 Protein of unknown function (DUF1040) INQ46_22000 PF12804 MobA-like NTP transferase domain INQ46_22005 PF03205 Molybdopterin guanine dinucleotide synthesis protein B INQ46_22035 PF12724 Flavodoxin domain INQ46_22040 PF02386 Cation transport protein INQ46_22045 PF01205 Uncharacterized protein family UPF0029 INQ46_22045 PF09186 Domain of unknown function (DUF1949) INQ46_22050 PF00557 Metallopeptidase family M24 INQ46_22055 PF00378 Enoyl-CoA hydratase/isomerase INQ46_22055 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain INQ46_22055 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain INQ46_22060 PF02803 Thiolase, C-terminal domain INQ46_22060 PF00108 Thiolase, N-terminal domain INQ46_22065 PF17425 Arylsulfotransferase Ig-like domain INQ46_22065 PF05935 Arylsulfotransferase (ASST) INQ46_22070 PF00175 Oxidoreductase NAD-binding domain INQ46_22070 PF00970 Oxidoreductase FAD-binding domain INQ46_22075 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase INQ46_22080 PF02357 Transcription termination factor nusG INQ46_22085 PF01026 TatD related DNase INQ46_22090 PF00902 Sec-independent protein translocase protein (TatC) INQ46_22100 PF02416 mttA/Hcf106 family INQ46_22105 PF03109 ABC1 family INQ46_22110 PF02036 SCP-2 sterol transfer family INQ46_22115 PF01209 ubiE/COQ5 methyltransferase family INQ46_22120 PF02646 RmuC family INQ46_22125 PF01048 Phosphorylase superfamily INQ46_22130 PF01738 Dienelactone hydrolase family INQ46_22140 PF01717 Cobalamin-independent synthase, Catalytic domain INQ46_22140 PF08267 Cobalamin-independent synthase, N-terminal domain INQ46_22145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ46_22145 PF03466 LysR substrate binding domain INQ46_22150 PF00892 EamA-like transporter family INQ46_22160 PF12146 Serine aminopeptidase, S33 INQ46_22165 PF01810 LysE type translocator INQ46_22170 PF01810 LysE type translocator INQ46_22175 PF16124 RecQ zinc-binding INQ46_22175 PF00271 Helicase conserved C-terminal domain INQ46_22175 PF09382 RQC domain INQ46_22175 PF00270 DEAD/DEAH box helicase INQ46_22175 PF00570 HRDC domain INQ46_22180 PF02253 Phospholipase A1 INQ46_22185 PF03061 Thioesterase superfamily INQ46_22190 PF00892 EamA-like transporter family INQ46_22210 PF01544 CorA-like Mg2+ transporter protein INQ46_22215 PF13361 UvrD-like helicase C-terminal domain INQ46_22215 PF00580 UvrD/REP helicase N-terminal domain INQ46_22220 PF13419 Haloacid dehalogenase-like hydrolase INQ46_22225 PF02899 Phage integrase, N-terminal SAM-like domain INQ46_22225 PF00589 Phage integrase family INQ46_22230 PF04340 Protein of unknown function, DUF484 INQ46_22235 PF01678 Diaminopimelate epimerase INQ46_22240 PF13627 Prokaryotic lipoprotein-attachment site INQ46_22260 PF01491 Frataxin-like domain INQ46_22265 PF01295 Adenylate cyclase, class-I INQ46_22265 PF12633 Adenylate cyclase NT domain INQ46_22270 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain INQ46_22270 PF03900 Porphobilinogen deaminase, C-terminal domain INQ46_22275 PF02602 Uroporphyrinogen-III synthase HemD INQ46_22280 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase INQ46_22285 PF07219 HemY protein N-terminus INQ46_22285 PF07719 Tetratricopeptide repeat INQ46_22310 PF00324 Amino acid permease INQ46_22315 PF03808 Glycosyl transferase WecB/TagA/CpsF family INQ46_22320 PF06899 WzyE protein, O-antigen assembly polymerase INQ46_22325 PF07429 4-alpha-L-fucosyltransferase glycosyl transferase group 56 INQ46_22330 PF01943 Polysaccharide biosynthesis protein INQ46_22335 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family INQ46_22345 PF00483 Nucleotidyl transferase INQ46_22350 PF16363 GDP-mannose 4,6 dehydratase INQ46_22355 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain INQ46_22355 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain INQ46_22355 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain INQ46_22360 PF02350 UDP-N-acetylglucosamine 2-epimerase INQ46_22365 PF02706 Chain length determinant protein INQ46_22370 PF00953 Glycosyl transferase family 4 INQ46_22375 PF07497 Rho termination factor, RNA-binding domain INQ46_22375 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain INQ46_22375 PF07498 Rho termination factor, N-terminal domain INQ46_22385 PF00085 Thioredoxin INQ46_22390 PF00271 Helicase conserved C-terminal domain INQ46_22390 PF00270 DEAD/DEAH box helicase INQ46_22395 PF02541 Ppx/GppA phosphatase family INQ46_22400 PF00580 UvrD/REP helicase N-terminal domain INQ46_22400 PF13361 UvrD-like helicase C-terminal domain INQ46_22405 PF04973 Nicotinamide mononucleotide transporter INQ46_22410 PF01048 Phosphorylase superfamily INQ46_22425 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain INQ46_22425 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain INQ46_22430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ46_22430 PF03466 LysR substrate binding domain INQ46_22445 PF00291 Pyridoxal-phosphate dependent enzyme INQ46_22445 PF00585 C-terminal regulatory domain of Threonine dehydratase INQ46_22450 PF00920 Dehydratase family INQ46_22455 PF01063 Amino-transferase class IV INQ46_22465 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain INQ46_22465 PF00205 Thiamine pyrophosphate enzyme, central domain INQ46_22465 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain INQ46_22475 PF08046 IlvGEDA operon leader peptide INQ46_22480 PF01078 Magnesium chelatase, subunit ChlI INQ46_22480 PF13335 Magnesium chelatase, subunit ChlI C-terminal INQ46_22485 PF04219 Protein of unknown function, DUF INQ46_22490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ46_22490 PF03466 LysR substrate binding domain INQ46_22525 PF00392 Bacterial regulatory proteins, gntR family INQ46_22525 PF07729 FCD domain INQ46_22530 PF07690 Major Facilitator Superfamily INQ46_22535 PF00356 Bacterial regulatory proteins, lacI family INQ46_22540 PF00294 pfkB family carbohydrate kinase INQ46_22545 PF13407 Periplasmic binding protein domain INQ46_22550 PF02653 Branched-chain amino acid transport system / permease component INQ46_22555 PF00005 ABC transporter INQ46_22560 PF05025 RbsD / FucU transport protein family INQ46_22565 PF02705 K+ potassium transporter INQ46_22570 PF07728 AAA domain (dynein-related subfamily) INQ46_22570 PF12592 Protein of unknown function (DUF3763) INQ46_22570 PF17868 AAA lid domain INQ46_22575 PF05762 VWA domain containing CoxE-like protein INQ46_22580 PF03590 Aspartate-ammonia ligase INQ46_22585 PF01037 Lrp/AsnC ligand binding domain INQ46_22590 PF00258 Flavodoxin INQ46_22595 PF01134 Glucose inhibited division protein A INQ46_22595 PF13932 GidA associated domain INQ46_22600 PF02527 rRNA small subunit methyltransferase G INQ46_22605 PF03899 ATP synthase I chain INQ46_22610 PF00119 ATP synthase A chain INQ46_22615 PF00137 ATP synthase subunit C INQ46_22620 PF00430 ATP synthase B/B' CF(0) INQ46_22625 PF00213 ATP synthase delta (OSCP) subunit INQ46_22630 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain INQ46_22630 PF00306 ATP synthase alpha/beta chain, C terminal domain INQ46_22630 PF02874 ATP synthase alpha/beta family, beta-barrel domain INQ46_22635 PF00231 ATP synthase INQ46_22640 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain INQ46_22640 PF02874 ATP synthase alpha/beta family, beta-barrel domain INQ46_22645 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain INQ46_22645 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain INQ46_22655 PF12804 MobA-like NTP transferase domain INQ46_22655 PF00132 Bacterial transferase hexapeptide (six repeats) INQ46_22660 PF01380 SIS domain INQ46_22665 PF00419 Fimbrial protein INQ46_22670 PF02753 Pili assembly chaperone PapD, C-terminal domain INQ46_22670 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain INQ46_22685 PF13953 PapC C-terminal domain INQ46_22685 PF13954 PapC N-terminal domain INQ46_22685 PF00577 Outer membrane usher protein INQ46_22690 PF00419 Fimbrial protein INQ46_22695 PF12793 Sugar transport-related sRNA regulator N-term INQ46_22695 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle INQ46_22700 PF08501 Shikimate dehydrogenase substrate binding domain INQ46_22705 PF02378 Phosphotransferase system, EIIC INQ46_22705 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit INQ46_22710 PF12849 PBP superfamily domain INQ46_22715 PF00528 Binding-protein-dependent transport system inner membrane component INQ46_22720 PF00528 Binding-protein-dependent transport system inner membrane component INQ46_22725 PF00005 ABC transporter INQ46_22730 PF01895 PhoU domain INQ46_22735 PF13419 Haloacid dehalogenase-like hydrolase INQ46_22740 PF00860 Permease family INQ46_22745 PF03358 NADPH-dependent FMN reductase INQ46_22755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ46_22755 PF03466 LysR substrate binding domain INQ46_22760 PF07690 Major Facilitator Superfamily INQ46_22765 PF10396 GTP-binding protein TrmE N-terminus INQ46_22765 PF01926 50S ribosome-binding GTPase INQ46_22765 PF12631 MnmE helical domain INQ46_22770 PF14849 YidC periplasmic domain INQ46_22770 PF02096 60Kd inner membrane protein INQ46_22775 PF01809 Putative membrane protein insertion efficiency factor INQ46_22780 PF00825 Ribonuclease P INQ46_22785 PF00468 Ribosomal protein L34