AM378_17190 291caacd3abbde4b4bf154f2a50b528d 548 Gene3D G3DSA:1.10.1390.10 511 548 7.1E-20 T 15-10-2018 IPR023096 Phosphoglucose isomerase, C-terminal GO:0004347|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM378_17190 291caacd3abbde4b4bf154f2a50b528d 548 Gene3D G3DSA:3.40.50.10490 103 289 2.7E-91 T 15-10-2018 AM378_17190 291caacd3abbde4b4bf154f2a50b528d 548 Pfam PF00342 Phosphoglucose isomerase 52 541 1.8E-254 T 15-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM378_17190 291caacd3abbde4b4bf154f2a50b528d 548 Hamap MF_00473 Glucose-6-phosphate isomerase [pgi]. 46 524 42.737 T 15-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM378_17190 291caacd3abbde4b4bf154f2a50b528d 548 Gene3D G3DSA:3.40.50.10490 290 510 1.6E-111 T 15-10-2018 AM378_17190 291caacd3abbde4b4bf154f2a50b528d 548 Gene3D G3DSA:3.40.50.10490 1 102 8.6E-35 T 15-10-2018 AM378_17190 291caacd3abbde4b4bf154f2a50b528d 548 PRINTS PR00662 Glucose-6-phosphate isomerase signature 338 359 3.7E-55 T 15-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM378_17190 291caacd3abbde4b4bf154f2a50b528d 548 PRINTS PR00662 Glucose-6-phosphate isomerase signature 497 510 3.7E-55 T 15-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM378_17190 291caacd3abbde4b4bf154f2a50b528d 548 PRINTS PR00662 Glucose-6-phosphate isomerase signature 465 483 3.7E-55 T 15-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM378_17190 291caacd3abbde4b4bf154f2a50b528d 548 PRINTS PR00662 Glucose-6-phosphate isomerase signature 150 169 3.7E-55 T 15-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM378_17190 291caacd3abbde4b4bf154f2a50b528d 548 PRINTS PR00662 Glucose-6-phosphate isomerase signature 261 279 3.7E-55 T 15-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM378_17190 291caacd3abbde4b4bf154f2a50b528d 548 PRINTS PR00662 Glucose-6-phosphate isomerase signature 483 497 3.7E-55 T 15-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM378_17190 291caacd3abbde4b4bf154f2a50b528d 548 ProSitePatterns PS00174 Phosphoglucose isomerase signature 2. 497 514 - T 15-10-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM378_17190 291caacd3abbde4b4bf154f2a50b528d 548 ProSitePatterns PS00765 Phosphoglucose isomerase signature 1. 265 278 - T 15-10-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM378_17190 291caacd3abbde4b4bf154f2a50b528d 548 SUPERFAMILY SSF53697 5 547 2.78E-227 T 15-10-2018 AM378_23165 a52f82d8189b82a3bd83f02b2bceeee9 851 Gene3D G3DSA:1.10.1420.10 269 559 1.7E-106 T 15-10-2018 AM378_23165 a52f82d8189b82a3bd83f02b2bceeee9 851 Hamap MF_00096 DNA mismatch repair protein MutS [mutS]. 10 843 25.453 T 15-10-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 AM378_23165 a52f82d8189b82a3bd83f02b2bceeee9 851 Gene3D G3DSA:3.40.1170.10 2 124 7.3E-53 T 15-10-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 AM378_23165 a52f82d8189b82a3bd83f02b2bceeee9 851 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 688 704 - T 15-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 AM378_23165 a52f82d8189b82a3bd83f02b2bceeee9 851 Pfam PF05192 MutS domain III 272 559 2.7E-40 T 15-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 AM378_23165 a52f82d8189b82a3bd83f02b2bceeee9 851 Gene3D G3DSA:3.40.50.300 570 843 1.1E-102 T 15-10-2018 AM378_23165 a52f82d8189b82a3bd83f02b2bceeee9 851 SUPERFAMILY SSF48334 270 565 1.96E-90 T 15-10-2018 IPR036187 DNA mismatch repair protein MutS, core domain superfamily AM378_23165 a52f82d8189b82a3bd83f02b2bceeee9 851 SUPERFAMILY SSF52540 567 798 1.25E-61 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_23165 a52f82d8189b82a3bd83f02b2bceeee9 851 SMART SM00534 607 794 1.5E-123 T 15-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 AM378_23165 a52f82d8189b82a3bd83f02b2bceeee9 851 Pfam PF05190 MutS family domain IV 428 517 2.3E-28 T 15-10-2018 IPR007861 DNA mismatch repair protein MutS, clamp GO:0005524|GO:0006298|GO:0030983 AM378_23165 a52f82d8189b82a3bd83f02b2bceeee9 851 Pfam PF00488 MutS domain V 610 797 1.3E-88 T 15-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 AM378_23165 a52f82d8189b82a3bd83f02b2bceeee9 851 Gene3D G3DSA:3.30.420.110 130 265 4.0E-39 T 15-10-2018 IPR036678 MutS, connector domain superfamily GO:0005524|GO:0006298|GO:0030983 AM378_23165 a52f82d8189b82a3bd83f02b2bceeee9 851 SUPERFAMILY SSF55271 5 116 5.49E-43 T 15-10-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 AM378_23165 a52f82d8189b82a3bd83f02b2bceeee9 851 Gene3D G3DSA:1.10.1420.10 387 503 1.7E-106 T 15-10-2018 AM378_23165 a52f82d8189b82a3bd83f02b2bceeee9 851 TIGRFAM TIGR01070 mutS1: DNA mismatch repair protein MutS 10 848 0.0 T 15-10-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 AM378_23165 a52f82d8189b82a3bd83f02b2bceeee9 851 Pfam PF01624 MutS domain I 11 122 1.8E-42 T 15-10-2018 IPR007695 DNA mismatch repair protein MutS-like, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 AM378_23165 a52f82d8189b82a3bd83f02b2bceeee9 851 PIRSF PIRSF037677 3 831 1.4E-154 T 15-10-2018 IPR017261 DNA mismatch repair protein MutS/MSH GO:0006298|GO:0030983 AM378_23165 a52f82d8189b82a3bd83f02b2bceeee9 851 SUPERFAMILY SSF53150 117 269 2.75E-43 T 15-10-2018 IPR036678 MutS, connector domain superfamily GO:0005524|GO:0006298|GO:0030983 AM378_23165 a52f82d8189b82a3bd83f02b2bceeee9 851 SMART SM00533 286 591 4.3E-107 T 15-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 AM378_23165 a52f82d8189b82a3bd83f02b2bceeee9 851 Pfam PF05188 MutS domain II 131 256 3.2E-34 T 15-10-2018 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 AM378_17375 d80fbb5d4ea3815620acf83dd1cfa904 429 SUPERFAMILY SSF48013 6 149 4.91E-36 T 15-10-2018 IPR035926 NusB-like superfamily AM378_17375 d80fbb5d4ea3815620acf83dd1cfa904 429 Gene3D G3DSA:3.40.50.150 231 429 2.0E-71 T 15-10-2018 AM378_17375 d80fbb5d4ea3815620acf83dd1cfa904 429 Hamap MF_01856 Ribosomal RNA small subunit methyltransferase B [rsmB]. 1 429 69.797 T 15-10-2018 IPR023541 rRNA small subunit methyltransferase B, enterobacteriaceae GO:0008649 AM378_17375 d80fbb5d4ea3815620acf83dd1cfa904 429 Gene3D G3DSA:1.10.287.730 146 172 3.0E-14 T 15-10-2018 AM378_17375 d80fbb5d4ea3815620acf83dd1cfa904 429 Gene3D G3DSA:1.10.940.10 1 145 2.1E-49 T 15-10-2018 IPR035926 NusB-like superfamily AM378_17375 d80fbb5d4ea3815620acf83dd1cfa904 429 SUPERFAMILY SSF53335 141 428 6.18E-79 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM378_17375 d80fbb5d4ea3815620acf83dd1cfa904 429 Gene3D G3DSA:3.30.70.1170 173 230 2.7E-27 T 15-10-2018 AM378_17375 d80fbb5d4ea3815620acf83dd1cfa904 429 Pfam PF01189 16S rRNA methyltransferase RsmB/F 241 426 4.8E-75 T 15-10-2018 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 AM378_17375 d80fbb5d4ea3815620acf83dd1cfa904 429 ProSitePatterns PS01153 NOL1/NOP2/sun family signature. 316 327 - T 15-10-2018 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site GO:0003723|GO:0008168 AM378_17375 d80fbb5d4ea3815620acf83dd1cfa904 429 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 411 428 2.3E-31 T 15-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase AM378_17375 d80fbb5d4ea3815620acf83dd1cfa904 429 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 222 236 2.3E-31 T 15-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase AM378_17375 d80fbb5d4ea3815620acf83dd1cfa904 429 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 317 329 2.3E-31 T 15-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase AM378_17375 d80fbb5d4ea3815620acf83dd1cfa904 429 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 251 261 2.3E-31 T 15-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase AM378_17375 d80fbb5d4ea3815620acf83dd1cfa904 429 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 367 383 2.3E-31 T 15-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase AM378_17375 d80fbb5d4ea3815620acf83dd1cfa904 429 Pfam PF01029 NusB family 6 127 1.6E-24 T 15-10-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 AM378_17375 d80fbb5d4ea3815620acf83dd1cfa904 429 TIGRFAM TIGR00563 rsmB: 16S rRNA (cytosine(967)-C(5))-methyltransferase 8 428 5.9E-174 T 15-10-2018 IPR004573 rRNA small subunit methyltransferase B GO:0006364|GO:0008649 AM378_03270 2db4233c68ae96103134fb469d3d3e25 243 Gene3D G3DSA:3.40.190.10 26 240 7.3E-86 T 15-10-2018 AM378_03270 2db4233c68ae96103134fb469d3d3e25 243 Gene3D G3DSA:3.40.190.10 108 201 7.3E-86 T 15-10-2018 AM378_03270 2db4233c68ae96103134fb469d3d3e25 243 SMART SM00062 22 241 6.1E-88 T 15-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AM378_03270 2db4233c68ae96103134fb469d3d3e25 243 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 45 58 - T 15-10-2018 IPR018313 Solute-binding protein family 3, conserved site AM378_03270 2db4233c68ae96103134fb469d3d3e25 243 SMART SM00079 22 243 1.7E-4 T 15-10-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 AM378_03270 2db4233c68ae96103134fb469d3d3e25 243 TIGRFAM TIGR01096 3A0103s03R: lysine-arginine-ornithine-binding periplasmic protein 4 241 1.2E-92 T 15-10-2018 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter GO:0030288|GO:0071705 AM378_03270 2db4233c68ae96103134fb469d3d3e25 243 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 23 242 1.8E-73 T 15-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AM378_03270 2db4233c68ae96103134fb469d3d3e25 243 SUPERFAMILY SSF53850 1 242 1.48E-74 T 15-10-2018 AM378_19765 715ce44cda6292e3344831f2b6e5661c 511 Pfam PF07690 Major Facilitator Superfamily 32 427 2.3E-12 T 15-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM378_19765 715ce44cda6292e3344831f2b6e5661c 511 Gene3D G3DSA:1.20.1250.20 20 213 4.9E-10 T 15-10-2018 AM378_19765 715ce44cda6292e3344831f2b6e5661c 511 SUPERFAMILY SSF103473 26 503 1.14E-19 T 15-10-2018 IPR036259 MFS transporter superfamily AM378_00465 c417262b79bfa2ce8937b389f7b83774 421 Gene3D G3DSA:3.90.1700.10 250 418 1.7E-71 T 15-10-2018 AM378_00465 c417262b79bfa2ce8937b389f7b83774 421 Gene3D G3DSA:3.90.1710.10 108 243 1.8E-77 T 15-10-2018 AM378_00465 c417262b79bfa2ce8937b389f7b83774 421 Gene3D G3DSA:1.10.10.660 42 107 1.8E-77 T 15-10-2018 IPR024033 Uncharacterised domain superfamily, YlbE AM378_00465 c417262b79bfa2ce8937b389f7b83774 421 Pfam PF06545 Protein of unknown function (DUF1116) 87 302 2.4E-98 T 15-10-2018 IPR009499 Protein of unknown function DUF1116 AM378_20630 416b9233a7fa4866710c4eb7fce56f5e 1342 Hamap MF_01321 DNA-directed RNA polymerase subunit beta [rpoB]. 13 1342 12.319 T 15-10-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM378_20630 416b9233a7fa4866710c4eb7fce56f5e 1342 Gene3D G3DSA:3.90.1100.10 442 630 1.7E-70 T 15-10-2018 AM378_20630 416b9233a7fa4866710c4eb7fce56f5e 1342 Gene3D G3DSA:3.90.1100.10 19 156 1.7E-48 T 15-10-2018 AM378_20630 416b9233a7fa4866710c4eb7fce56f5e 1342 Gene3D G3DSA:3.90.1800.10 1252 1305 8.2E-11 T 15-10-2018 AM378_20630 416b9233a7fa4866710c4eb7fce56f5e 1342 Gene3D G3DSA:3.90.1100.10 643 713 5.4E-21 T 15-10-2018 AM378_20630 416b9233a7fa4866710c4eb7fce56f5e 1342 Pfam PF04565 RNA polymerase Rpb2, domain 3 513 580 1.5E-30 T 15-10-2018 IPR007645 RNA polymerase Rpb2, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM378_20630 416b9233a7fa4866710c4eb7fce56f5e 1342 SUPERFAMILY SSF64484 11 1341 0.0 T 15-10-2018 AM378_20630 416b9233a7fa4866710c4eb7fce56f5e 1342 Gene3D G3DSA:3.90.1110.10 317 441 1.1E-35 T 15-10-2018 IPR037034 RNA polymerase Rpb2, domain 2 superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM378_20630 416b9233a7fa4866710c4eb7fce56f5e 1342 Pfam PF04560 RNA polymerase Rpb2, domain 7 1266 1340 3.3E-27 T 15-10-2018 IPR007641 RNA polymerase Rpb2, domain 7 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM378_20630 416b9233a7fa4866710c4eb7fce56f5e 1342 Pfam PF04561 RNA polymerase Rpb2, domain 2 151 225 1.9E-7 T 15-10-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM378_20630 416b9233a7fa4866710c4eb7fce56f5e 1342 Pfam PF04561 RNA polymerase Rpb2, domain 2 336 454 5.7E-15 T 15-10-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM378_20630 416b9233a7fa4866710c4eb7fce56f5e 1342 Gene3D G3DSA:2.40.50.100 714 788 3.8E-32 T 15-10-2018 AM378_20630 416b9233a7fa4866710c4eb7fce56f5e 1342 ProSitePatterns PS01166 RNA polymerases beta chain signature. 1063 1075 - T 15-10-2018 IPR007121 RNA polymerase, beta subunit, conserved site GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM378_20630 416b9233a7fa4866710c4eb7fce56f5e 1342 Gene3D G3DSA:3.90.1110.10 157 277 1.3E-28 T 15-10-2018 IPR037034 RNA polymerase Rpb2, domain 2 superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM378_20630 416b9233a7fa4866710c4eb7fce56f5e 1342 Gene3D G3DSA:2.40.270.10 790 832 5.4E-7 T 15-10-2018 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM378_20630 416b9233a7fa4866710c4eb7fce56f5e 1342 Pfam PF04563 RNA polymerase beta subunit 26 500 3.4E-57 T 15-10-2018 IPR007644 RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM378_20630 416b9233a7fa4866710c4eb7fce56f5e 1342 TIGRFAM TIGR02013 rpoB: DNA-directed RNA polymerase, beta subunit 8 1339 0.0 T 15-10-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM378_20630 416b9233a7fa4866710c4eb7fce56f5e 1342 Gene3D G3DSA:2.40.50.150 833 955 3.1E-44 T 15-10-2018 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM378_20630 416b9233a7fa4866710c4eb7fce56f5e 1342 Pfam PF00562 RNA polymerase Rpb2, domain 6 717 1264 2.7E-160 T 15-10-2018 IPR007120 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM378_20630 416b9233a7fa4866710c4eb7fce56f5e 1342 Pfam PF10385 RNA polymerase beta subunit external 1 domain 591 656 4.3E-27 T 15-10-2018 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM378_20630 416b9233a7fa4866710c4eb7fce56f5e 1342 Gene3D G3DSA:2.40.270.10 1034 1242 1.4E-92 T 15-10-2018 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM378_18130 46361fc21f257b62162b6b6cd5e20573 278 SUPERFAMILY SSF53697 117 270 4.85E-28 T 15-10-2018 AM378_18130 46361fc21f257b62162b6b6cd5e20573 278 Pfam PF01380 SIS domain 142 268 1.0E-25 T 15-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 AM378_18130 46361fc21f257b62162b6b6cd5e20573 278 SUPERFAMILY SSF46689 11 85 1.09E-18 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AM378_18130 46361fc21f257b62162b6b6cd5e20573 278 Pfam PF01418 Helix-turn-helix domain, rpiR family 11 80 1.7E-12 T 15-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 AM378_18130 46361fc21f257b62162b6b6cd5e20573 278 Gene3D G3DSA:3.40.50.10490 111 277 8.0E-38 T 15-10-2018 AM378_18130 46361fc21f257b62162b6b6cd5e20573 278 Gene3D G3DSA:1.10.10.10 6 83 7.4E-18 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_18085 c806e52d3efc534c0f243305e6fc026e 331 Gene3D G3DSA:1.10.260.40 1 61 6.1E-16 T 15-10-2018 AM378_18085 c806e52d3efc534c0f243305e6fc026e 331 Gene3D G3DSA:3.40.50.2300 67 308 4.1E-64 T 15-10-2018 AM378_18085 c806e52d3efc534c0f243305e6fc026e 331 SUPERFAMILY SSF47413 5 62 2.25E-13 T 15-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AM378_18085 c806e52d3efc534c0f243305e6fc026e 331 Gene3D G3DSA:3.40.50.2300 161 292 4.1E-64 T 15-10-2018 AM378_18085 c806e52d3efc534c0f243305e6fc026e 331 SUPERFAMILY SSF53822 63 317 2.36E-58 T 15-10-2018 IPR028082 Periplasmic binding protein-like I AM378_18085 c806e52d3efc534c0f243305e6fc026e 331 ProSitePatterns PS00356 LacI-type HTH domain signature. 8 26 - T 15-10-2018 AM378_18085 c806e52d3efc534c0f243305e6fc026e 331 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 64 307 2.0E-29 T 15-10-2018 IPR001761 Periplasmic binding protein/LacI sugar binding domain AM378_18085 c806e52d3efc534c0f243305e6fc026e 331 Pfam PF00356 Bacterial regulatory proteins, lacI family 8 52 1.7E-16 T 15-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM378_18085 c806e52d3efc534c0f243305e6fc026e 331 SMART SM00354 5 75 5.1E-25 T 15-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM378_22510 27740668177aafad265d8b1ecafa65a1 637 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 7 14 - T 15-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 AM378_22510 27740668177aafad265d8b1ecafa65a1 637 Hamap MF_00332 Chaperone protein DnaK [dnaK]. 1 633 36.886 T 15-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 AM378_22510 27740668177aafad265d8b1ecafa65a1 637 Gene3D G3DSA:3.30.420.40 5 379 1.1E-171 T 15-10-2018 AM378_22510 27740668177aafad265d8b1ecafa65a1 637 SUPERFAMILY SSF53067 187 382 9.72E-68 T 15-10-2018 AM378_22510 27740668177aafad265d8b1ecafa65a1 637 PRINTS PR00301 70kDa heat shock protein signature 138 158 4.9E-78 T 15-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AM378_22510 27740668177aafad265d8b1ecafa65a1 637 PRINTS PR00301 70kDa heat shock protein signature 198 208 4.9E-78 T 15-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AM378_22510 27740668177aafad265d8b1ecafa65a1 637 PRINTS PR00301 70kDa heat shock protein signature 469 485 4.9E-78 T 15-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AM378_22510 27740668177aafad265d8b1ecafa65a1 637 PRINTS PR00301 70kDa heat shock protein signature 54 62 4.9E-78 T 15-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AM378_22510 27740668177aafad265d8b1ecafa65a1 637 PRINTS PR00301 70kDa heat shock protein signature 31 43 4.9E-78 T 15-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AM378_22510 27740668177aafad265d8b1ecafa65a1 637 PRINTS PR00301 70kDa heat shock protein signature 334 350 4.9E-78 T 15-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AM378_22510 27740668177aafad265d8b1ecafa65a1 637 PRINTS PR00301 70kDa heat shock protein signature 365 385 4.9E-78 T 15-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AM378_22510 27740668177aafad265d8b1ecafa65a1 637 PRINTS PR00301 70kDa heat shock protein signature 3 16 4.9E-78 T 15-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AM378_22510 27740668177aafad265d8b1ecafa65a1 637 PRINTS PR00301 70kDa heat shock protein signature 388 407 4.9E-78 T 15-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AM378_22510 27740668177aafad265d8b1ecafa65a1 637 SUPERFAMILY SSF100934 507 608 1.29E-16 T 15-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 AM378_22510 27740668177aafad265d8b1ecafa65a1 637 Gene3D G3DSA:3.90.640.10 229 316 1.1E-171 T 15-10-2018 AM378_22510 27740668177aafad265d8b1ecafa65a1 637 SUPERFAMILY SSF100920 384 540 4.32E-60 T 15-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 AM378_22510 27740668177aafad265d8b1ecafa65a1 637 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 192 205 - T 15-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 AM378_22510 27740668177aafad265d8b1ecafa65a1 637 Gene3D G3DSA:3.30.420.40 180 366 1.1E-171 T 15-10-2018 AM378_22510 27740668177aafad265d8b1ecafa65a1 637 Pfam PF00012 Hsp70 protein 4 602 1.2E-265 T 15-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AM378_22510 27740668177aafad265d8b1ecafa65a1 637 Gene3D G3DSA:2.60.34.10 383 523 9.2E-66 T 15-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 AM378_22510 27740668177aafad265d8b1ecafa65a1 637 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 337 351 - T 15-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 AM378_22510 27740668177aafad265d8b1ecafa65a1 637 TIGRFAM TIGR02350 prok_dnaK: chaperone protein DnaK 3 601 2.3E-291 T 15-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 AM378_22510 27740668177aafad265d8b1ecafa65a1 637 Gene3D G3DSA:1.20.1270.10 524 603 1.0E-29 T 15-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 AM378_22510 27740668177aafad265d8b1ecafa65a1 637 SUPERFAMILY SSF53067 4 183 5.94E-66 T 15-10-2018 AM378_24005 8ace07384278bb53374c48335c21a58f 185 SUPERFAMILY SSF53335 15 165 3.41E-13 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM378_24005 8ace07384278bb53374c48335c21a58f 185 Gene3D G3DSA:3.40.50.150 28 174 2.7E-9 T 15-10-2018 AM378_24005 8ace07384278bb53374c48335c21a58f 185 Pfam PF00398 Ribosomal RNA adenine dimethylase 35 172 5.5E-5 T 15-10-2018 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm AM378_01360 49f10fb68fc770ce27751a21884cd8d0 159 Pfam PF01967 MoaC family 15 150 2.4E-54 T 15-10-2018 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AM378_01360 49f10fb68fc770ce27751a21884cd8d0 159 Hamap MF_01224_B Cyclic pyranopterin monophosphate synthase [moaC]. 2 158 36.27 T 15-10-2018 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AM378_01360 49f10fb68fc770ce27751a21884cd8d0 159 Gene3D G3DSA:3.30.70.640 1 159 1.3E-69 T 15-10-2018 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AM378_01360 49f10fb68fc770ce27751a21884cd8d0 159 SUPERFAMILY SSF55040 11 155 5.49E-61 T 15-10-2018 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AM378_01360 49f10fb68fc770ce27751a21884cd8d0 159 TIGRFAM TIGR00581 moaC: molybdenum cofactor biosynthesis protein C 4 152 1.6E-71 T 15-10-2018 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AM378_24150 ea718c997a0fc3c3b5d5cb51d7bfe5a8 438 Pfam PF11808 Domain of unknown function (DUF3329) 6 91 1.8E-29 T 15-10-2018 IPR021766 Phosphate regulon sensor protein PhoR GO:0000155|GO:0000160|GO:0004721 AM378_24150 ea718c997a0fc3c3b5d5cb51d7bfe5a8 438 TIGRFAM TIGR02966 phoR_proteo: phosphate regulon sensor kinase PhoR 96 420 2.9E-136 T 15-10-2018 IPR014310 Signal transduction histidine kinase, phosphate regulon sensor PhoR GO:0000155|GO:0000160|GO:0004673|GO:0016021 AM378_24150 ea718c997a0fc3c3b5d5cb51d7bfe5a8 438 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 98 211 2.5E-8 T 15-10-2018 IPR000014 PAS domain AM378_24150 ea718c997a0fc3c3b5d5cb51d7bfe5a8 438 Pfam PF00989 PAS fold 99 189 1.9E-7 T 15-10-2018 IPR013767 PAS fold GO:0006355 AM378_24150 ea718c997a0fc3c3b5d5cb51d7bfe5a8 438 Gene3D G3DSA:3.30.450.20 84 199 6.5E-8 T 15-10-2018 AM378_24150 ea718c997a0fc3c3b5d5cb51d7bfe5a8 438 SMART SM00388 203 269 3.1E-22 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM378_24150 ea718c997a0fc3c3b5d5cb51d7bfe5a8 438 SUPERFAMILY SSF55785 87 195 1.08E-10 T 15-10-2018 IPR035965 PAS domain superfamily AM378_24150 ea718c997a0fc3c3b5d5cb51d7bfe5a8 438 SMART SM00091 98 164 6.0E-6 T 15-10-2018 IPR000014 PAS domain AM378_24150 ea718c997a0fc3c3b5d5cb51d7bfe5a8 438 SUPERFAMILY SSF47384 190 268 7.26E-20 T 15-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AM378_24150 ea718c997a0fc3c3b5d5cb51d7bfe5a8 438 Pfam PF00512 His Kinase A (phospho-acceptor) domain 203 268 4.7E-19 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM378_24150 ea718c997a0fc3c3b5d5cb51d7bfe5a8 438 SMART SM00387 313 425 1.1E-36 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AM378_24150 ea718c997a0fc3c3b5d5cb51d7bfe5a8 438 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 313 423 5.8E-25 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AM378_24150 ea718c997a0fc3c3b5d5cb51d7bfe5a8 438 SUPERFAMILY SSF55874 259 423 1.15E-41 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AM378_24150 ea718c997a0fc3c3b5d5cb51d7bfe5a8 438 Gene3D G3DSA:3.30.565.10 280 425 3.7E-38 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AM378_24150 ea718c997a0fc3c3b5d5cb51d7bfe5a8 438 PRINTS PR00344 Bacterial sensor protein C-terminal signature 385 403 2.7E-14 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM378_24150 ea718c997a0fc3c3b5d5cb51d7bfe5a8 438 PRINTS PR00344 Bacterial sensor protein C-terminal signature 350 364 2.7E-14 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM378_24150 ea718c997a0fc3c3b5d5cb51d7bfe5a8 438 PRINTS PR00344 Bacterial sensor protein C-terminal signature 409 422 2.7E-14 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM378_24150 ea718c997a0fc3c3b5d5cb51d7bfe5a8 438 PRINTS PR00344 Bacterial sensor protein C-terminal signature 368 378 2.7E-14 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM378_24150 ea718c997a0fc3c3b5d5cb51d7bfe5a8 438 Gene3D G3DSA:1.10.287.130 200 269 8.0E-23 T 15-10-2018 AM378_14755 f9b75d9b2c0448f1c7e66e09271276a7 379 ProSitePatterns PS00557 FMN-dependent alpha-hydroxy acid dehydrogenases active site. 273 279 - T 15-10-2018 IPR008259 FMN-dependent alpha-hydroxy acid dehydrogenase, active site GO:0016491|GO:0055114 Reactome: R-HSA-9033241 AM378_14755 f9b75d9b2c0448f1c7e66e09271276a7 379 Hamap MF_01559 L-lactate dehydrogenase [lldD]. 1 379 74.181 T 15-10-2018 IPR020920 L-lactate dehydrogenase, bacterial GO:0004457|GO:0006089|GO:0010181|GO:0055114 AM378_14755 f9b75d9b2c0448f1c7e66e09271276a7 379 SUPERFAMILY SSF51395 7 372 4.09E-100 T 15-10-2018 AM378_14755 f9b75d9b2c0448f1c7e66e09271276a7 379 PIRSF PIRSF000138 2 379 4.2E-121 T 15-10-2018 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent GO:0010181|GO:0016491|GO:0055114 Reactome: R-HSA-9033241 AM378_14755 f9b75d9b2c0448f1c7e66e09271276a7 379 Pfam PF01070 FMN-dependent dehydrogenase 13 375 6.1E-126 T 15-10-2018 IPR000262 FMN-dependent dehydrogenase GO:0016491 Reactome: R-HSA-9033241 AM378_14755 f9b75d9b2c0448f1c7e66e09271276a7 379 Gene3D G3DSA:3.20.20.70 3 379 9.2E-126 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM378_10260 535fc1ecdcc07d3d2d0ea68558822024 335 SUPERFAMILY SSF50129 11 150 4.87E-42 T 15-10-2018 IPR011032 GroES-like superfamily AM378_10260 535fc1ecdcc07d3d2d0ea68558822024 335 SMART SM00829 20 333 6.2E-58 T 15-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AM378_10260 535fc1ecdcc07d3d2d0ea68558822024 335 Gene3D G3DSA:3.90.180.10 23 333 4.7E-109 T 15-10-2018 AM378_10260 535fc1ecdcc07d3d2d0ea68558822024 335 TIGRFAM TIGR02824 quinone_pig3: putative NAD(P)H quinone oxidoreductase, PIG3 family 11 334 1.1E-152 T 15-10-2018 IPR014189 Quinone oxidoreductase PIG3 Reactome: R-HSA-6803205 AM378_10260 535fc1ecdcc07d3d2d0ea68558822024 335 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 38 115 1.4E-10 T 15-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AM378_10260 535fc1ecdcc07d3d2d0ea68558822024 335 Pfam PF00107 Zinc-binding dehydrogenase 161 280 4.5E-27 T 15-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AM378_10260 535fc1ecdcc07d3d2d0ea68558822024 335 SUPERFAMILY SSF51735 121 297 2.67E-52 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily AM378_10260 535fc1ecdcc07d3d2d0ea68558822024 335 Gene3D G3DSA:3.40.50.720 130 272 4.7E-109 T 15-10-2018 AM378_22200 86f372128526ce135c04865979732fa9 287 SUPERFAMILY SSF51556 2 276 2.13E-64 T 15-10-2018 IPR032466 Metal-dependent hydrolase AM378_22200 86f372128526ce135c04865979732fa9 287 Pfam PF04909 Amidohydrolase 4 276 3.4E-30 T 15-10-2018 IPR006680 Amidohydrolase-related GO:0016787 AM378_22200 86f372128526ce135c04865979732fa9 287 Gene3D G3DSA:3.20.20.140 2 282 3.5E-80 T 15-10-2018 AM378_15610 ce76eb89729fa3025b6a6a96c764d7a6 380 Gene3D G3DSA:3.80.30.20 2 292 1.7E-99 T 15-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe AM378_15610 ce76eb89729fa3025b6a6a96c764d7a6 380 SMART SM00729 6 223 1.8E-52 T 15-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 AM378_15610 ce76eb89729fa3025b6a6a96c764d7a6 380 Pfam PF06969 HemN C-terminal domain 304 364 3.7E-10 T 15-10-2018 IPR010723 HemN, C-terminal AM378_15610 ce76eb89729fa3025b6a6a96c764d7a6 380 TIGRFAM TIGR00539 hemN_rel: putative oxygen-independent coproporphyrinogen III oxidase 7 368 9.5E-143 T 15-10-2018 IPR004559 Oxygen-independent coproporphyrinogen III oxidase-like GO:0004109|GO:0005737|GO:0006779|GO:0055114 AM378_15610 ce76eb89729fa3025b6a6a96c764d7a6 380 Pfam PF04055 Radical SAM superfamily 11 179 8.9E-18 T 15-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AM378_15610 ce76eb89729fa3025b6a6a96c764d7a6 380 SUPERFAMILY SSF102114 5 376 3.4E-110 T 15-10-2018 AM378_17260 4224267b488bbd11702d9ae9a32f2f3d 276 SUPERFAMILY SSF46785 27 100 5.81E-15 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM378_17260 4224267b488bbd11702d9ae9a32f2f3d 276 Pfam PF09339 IclR helix-turn-helix domain 29 79 3.3E-18 T 15-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 AM378_17260 4224267b488bbd11702d9ae9a32f2f3d 276 SMART SM00346 27 117 4.2E-33 T 15-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 AM378_17260 4224267b488bbd11702d9ae9a32f2f3d 276 Gene3D G3DSA:1.10.10.10 11 88 3.8E-19 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_17260 4224267b488bbd11702d9ae9a32f2f3d 276 SUPERFAMILY SSF55781 98 273 5.56E-48 T 15-10-2018 AM378_17260 4224267b488bbd11702d9ae9a32f2f3d 276 Pfam PF01614 Bacterial transcriptional regulator 148 270 2.5E-40 T 15-10-2018 IPR014757 Transcription regulator IclR, C-terminal AM378_17260 4224267b488bbd11702d9ae9a32f2f3d 276 Gene3D G3DSA:3.30.450.40 99 276 1.0E-64 T 15-10-2018 IPR029016 GAF-like domain superfamily AM378_18475 305449af8c1e994588a1632f0693b52e 679 Pfam PF05170 AsmA family 1 570 3.2E-140 T 15-10-2018 IPR007844 AsmA AM378_03285 fd7c2331a0603a14f1a197d3ba9c0b85 107 Pfam PF01906 Putative heavy-metal-binding 1 104 2.8E-40 T 15-10-2018 IPR002765 Uncharacterised protein family UPF0145 AM378_03285 fd7c2331a0603a14f1a197d3ba9c0b85 107 SUPERFAMILY SSF117782 1 105 2.75E-38 T 15-10-2018 IPR035439 UPF0145 domain superfamily AM378_03285 fd7c2331a0603a14f1a197d3ba9c0b85 107 Hamap MF_00338 UPF0145 protein YbjQ [ybjQ]. 1 105 24.638 T 15-10-2018 IPR002765 Uncharacterised protein family UPF0145 AM378_03285 fd7c2331a0603a14f1a197d3ba9c0b85 107 Gene3D G3DSA:3.30.110.70 2 107 7.0E-47 T 15-10-2018 AM378_12500 3ec5afb3b6b0ab8d735133350a54fb73 268 Gene3D G3DSA:3.40.50.300 2 255 2.2E-68 T 15-10-2018 AM378_12500 3ec5afb3b6b0ab8d735133350a54fb73 268 SMART SM00382 29 226 2.3E-14 T 15-10-2018 IPR003593 AAA+ ATPase domain AM378_12500 3ec5afb3b6b0ab8d735133350a54fb73 268 Pfam PF00005 ABC transporter 21 168 1.5E-30 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM378_12500 3ec5afb3b6b0ab8d735133350a54fb73 268 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM378_12500 3ec5afb3b6b0ab8d735133350a54fb73 268 SUPERFAMILY SSF52540 7 230 1.15E-60 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_22440 da09bb615862b990c23f096e42a9e261 289 Pfam PF12833 Helix-turn-helix domain 27 105 5.3E-20 T 15-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM378_22440 da09bb615862b990c23f096e42a9e261 289 Gene3D G3DSA:1.10.10.60 3 55 3.3E-27 T 15-10-2018 AM378_22440 da09bb615862b990c23f096e42a9e261 289 Gene3D G3DSA:1.10.10.60 56 121 7.7E-21 T 15-10-2018 AM378_22440 da09bb615862b990c23f096e42a9e261 289 SUPERFAMILY SSF46689 6 55 7.39E-11 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AM378_22440 da09bb615862b990c23f096e42a9e261 289 Gene3D G3DSA:3.20.80.10 122 289 9.1E-53 T 15-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily AM378_22440 da09bb615862b990c23f096e42a9e261 289 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 73 88 4.3E-5 T 15-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM378_22440 da09bb615862b990c23f096e42a9e261 289 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 88 104 4.3E-5 T 15-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM378_22440 da09bb615862b990c23f096e42a9e261 289 SUPERFAMILY SSF46689 57 107 5.82E-12 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AM378_22440 da09bb615862b990c23f096e42a9e261 289 SMART SM00871 126 288 4.5E-17 T 15-10-2018 IPR010499 Bacterial transcription activator, effector binding AM378_22440 da09bb615862b990c23f096e42a9e261 289 Pfam PF06445 GyrI-like small molecule binding domain 127 288 1.0E-22 T 15-10-2018 IPR029442 GyrI-like small molecule binding domain AM378_22440 da09bb615862b990c23f096e42a9e261 289 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 55 100 - T 15-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AM378_22440 da09bb615862b990c23f096e42a9e261 289 SMART SM00342 21 104 1.0E-31 T 15-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM378_22440 da09bb615862b990c23f096e42a9e261 289 SUPERFAMILY SSF55136 123 288 2.96E-53 T 15-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily AM378_08385 68aea4c06d16e0a6bfe712db25f4beef 641 Pfam PF01751 Toprim domain 3 135 6.2E-18 T 15-10-2018 IPR006171 TOPRIM domain AM378_08385 68aea4c06d16e0a6bfe712db25f4beef 641 Gene3D G3DSA:3.40.50.140 1 156 6.2E-64 T 15-10-2018 AM378_08385 68aea4c06d16e0a6bfe712db25f4beef 641 Gene3D G3DSA:1.10.460.10 162 602 5.0E-176 T 15-10-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 AM378_08385 68aea4c06d16e0a6bfe712db25f4beef 641 Gene3D G3DSA:2.70.20.10 217 488 5.0E-176 T 15-10-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 AM378_08385 68aea4c06d16e0a6bfe712db25f4beef 641 Gene3D G3DSA:1.10.290.10 289 416 5.0E-176 T 15-10-2018 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 AM378_08385 68aea4c06d16e0a6bfe712db25f4beef 641 SMART SM00437 280 558 2.2E-103 T 15-10-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 AM378_08385 68aea4c06d16e0a6bfe712db25f4beef 641 Hamap MF_00953 DNA topoisomerase 3 [topB]. 1 640 66.699 T 15-10-2018 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 AM378_08385 68aea4c06d16e0a6bfe712db25f4beef 641 Pfam PF01131 DNA topoisomerase 158 593 1.0E-110 T 15-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 AM378_08385 68aea4c06d16e0a6bfe712db25f4beef 641 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 323 332 3.8E-25 T 15-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 AM378_08385 68aea4c06d16e0a6bfe712db25f4beef 641 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 193 211 3.8E-25 T 15-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 AM378_08385 68aea4c06d16e0a6bfe712db25f4beef 641 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 98 111 3.8E-25 T 15-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 AM378_08385 68aea4c06d16e0a6bfe712db25f4beef 641 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 521 535 3.8E-25 T 15-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 AM378_08385 68aea4c06d16e0a6bfe712db25f4beef 641 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 402 418 3.8E-25 T 15-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 AM378_08385 68aea4c06d16e0a6bfe712db25f4beef 641 TIGRFAM TIGR01056 topB: DNA topoisomerase III 1 633 1.2E-281 T 15-10-2018 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 AM378_08385 68aea4c06d16e0a6bfe712db25f4beef 641 SUPERFAMILY SSF56712 1 607 1.44E-188 T 15-10-2018 IPR023405 DNA topoisomerase, type IA, core domain AM378_08385 68aea4c06d16e0a6bfe712db25f4beef 641 SMART SM00493 1 124 3.1E-31 T 15-10-2018 IPR006171 TOPRIM domain AM378_08385 68aea4c06d16e0a6bfe712db25f4beef 641 SMART SM00436 128 223 5.9E-37 T 15-10-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 AM378_08385 68aea4c06d16e0a6bfe712db25f4beef 641 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 317 332 - T 15-10-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 AM378_24365 1be853b51c76215a04c98e87cce3f8a9 423 SMART SM01086 317 412 1.1E-35 T 15-10-2018 IPR019489 Clp ATPase, C-terminal AM378_24365 1be853b51c76215a04c98e87cce3f8a9 423 SMART SM00994 12 51 1.0E-24 T 15-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 AM378_24365 1be853b51c76215a04c98e87cce3f8a9 423 Gene3D G3DSA:3.30.50.30 2 52 9.3E-28 T 15-10-2018 IPR038366 Zinc finger, ClpX C4-type superfamily AM378_24365 1be853b51c76215a04c98e87cce3f8a9 423 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 317 393 3.8E-17 T 15-10-2018 IPR019489 Clp ATPase, C-terminal AM378_24365 1be853b51c76215a04c98e87cce3f8a9 423 SUPERFAMILY SSF57716 13 48 5.84E-12 T 15-10-2018 AM378_24365 1be853b51c76215a04c98e87cce3f8a9 423 SUPERFAMILY SSF52540 64 402 7.3E-72 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_24365 1be853b51c76215a04c98e87cce3f8a9 423 Hamap MF_00175 ATP-dependent Clp protease ATP-binding subunit ClpX [clpX]. 4 415 53.391 T 15-10-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 AM378_24365 1be853b51c76215a04c98e87cce3f8a9 423 Pfam PF07724 AAA domain (Cdc48 subfamily) 112 310 3.0E-48 T 15-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AM378_24365 1be853b51c76215a04c98e87cce3f8a9 423 Gene3D G3DSA:3.40.50.300 62 315 3.5E-108 T 15-10-2018 AM378_24365 1be853b51c76215a04c98e87cce3f8a9 423 Pfam PF06689 ClpX C4-type zinc finger 13 50 1.2E-20 T 15-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 AM378_24365 1be853b51c76215a04c98e87cce3f8a9 423 TIGRFAM TIGR00382 clpX: ATP-dependent Clp protease, ATP-binding subunit ClpX 5 412 1.3E-213 T 15-10-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 AM378_24365 1be853b51c76215a04c98e87cce3f8a9 423 SMART SM00382 111 302 5.1E-10 T 15-10-2018 IPR003593 AAA+ ATPase domain AM378_24365 1be853b51c76215a04c98e87cce3f8a9 423 Gene3D G3DSA:1.10.8.60 316 423 1.8E-42 T 15-10-2018 AM378_21580 3605840e8ea35e624b2a0e3d72277f9d 554 TIGRFAM TIGR02403 trehalose_treC: alpha,alpha-phosphotrehalase 7 550 1.5E-252 T 15-10-2018 IPR012769 Trehalose-6-phosphate hydrolase GO:0005737|GO:0005993|GO:0008788 KEGG: 00500+3.2.1.93 AM378_21580 3605840e8ea35e624b2a0e3d72277f9d 554 SUPERFAMILY SSF51011 475 552 3.6E-18 T 15-10-2018 AM378_21580 3605840e8ea35e624b2a0e3d72277f9d 554 Pfam PF00128 Alpha amylase, catalytic domain 30 371 3.2E-126 T 15-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AM378_21580 3605840e8ea35e624b2a0e3d72277f9d 554 SUPERFAMILY SSF51445 5 472 2.41E-154 T 15-10-2018 IPR017853 Glycoside hydrolase superfamily AM378_21580 3605840e8ea35e624b2a0e3d72277f9d 554 Pfam PF11941 Domain of unknown function (DUF3459) 459 550 3.7E-12 T 15-10-2018 IPR022567 Glycosyl hydrolase, C-terminal (DUF3459) AM378_21580 3605840e8ea35e624b2a0e3d72277f9d 554 Gene3D G3DSA:2.60.40.1180 476 550 2.3E-18 T 15-10-2018 IPR013780 Glycosyl hydrolase, all-beta AM378_21580 3605840e8ea35e624b2a0e3d72277f9d 554 SMART SM00642 15 414 1.1E-158 T 15-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AM378_21580 3605840e8ea35e624b2a0e3d72277f9d 554 Gene3D G3DSA:3.90.400.10 107 175 2.8E-190 T 15-10-2018 AM378_21580 3605840e8ea35e624b2a0e3d72277f9d 554 Gene3D G3DSA:3.20.20.80 7 467 2.8E-190 T 15-10-2018 AM378_01155 70e1a18ddff252ebf5e5424af0d6af9f 353 Gene3D G3DSA:3.40.50.10800 31 322 4.9E-94 T 15-10-2018 AM378_01155 70e1a18ddff252ebf5e5424af0d6af9f 353 Gene3D G3DSA:3.40.50.10800 200 295 4.9E-94 T 15-10-2018 AM378_01155 70e1a18ddff252ebf5e5424af0d6af9f 353 Gene3D G3DSA:3.40.50.10800 115 340 4.9E-94 T 15-10-2018 AM378_01155 70e1a18ddff252ebf5e5424af0d6af9f 353 SUPERFAMILY SSF142754 29 341 2.09E-105 T 15-10-2018 IPR036094 Quinolinate synthetase A superfamily GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 AM378_01155 70e1a18ddff252ebf5e5424af0d6af9f 353 Pfam PF02445 Quinolinate synthetase A protein 31 340 7.0E-103 T 15-10-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 AM378_01155 70e1a18ddff252ebf5e5424af0d6af9f 353 TIGRFAM TIGR00550 nadA: quinolinate synthetase complex, A subunit 29 341 1.1E-122 T 15-10-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 AM378_01155 70e1a18ddff252ebf5e5424af0d6af9f 353 Hamap MF_00567 Quinolinate synthase A [nadA]. 1 347 71.031 T 15-10-2018 IPR023513 Quinolinate synthase A, type 1 GO:0016765 MetaCyc: PWY-5316|MetaCyc: PWY-7342 AM378_08555 cd22df84e1c180e20b752e4fed454e50 218 SUPERFAMILY SSF56529 12 212 3.79E-69 T 15-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 AM378_08555 cd22df84e1c180e20b752e4fed454e50 218 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 18 208 8.7E-54 T 15-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 AM378_08555 cd22df84e1c180e20b752e4fed454e50 218 Gene3D G3DSA:3.90.850.10 1 218 7.4E-78 T 15-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 AM378_18685 6d6e29926e47f2ae8a55a28c516dfc7c 811 Pfam PF00696 Amino acid kinase family 13 285 5.4E-43 T 15-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 AM378_18685 6d6e29926e47f2ae8a55a28c516dfc7c 811 Gene3D G3DSA:3.40.1160.10 16 299 9.3E-73 T 15-10-2018 IPR036393 Acetylglutamate kinase-like superfamily AM378_18685 6d6e29926e47f2ae8a55a28c516dfc7c 811 PIRSF PIRSF000727 13 811 1.1E-288 T 15-10-2018 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I GO:0004072|GO:0004412|GO:0009067|GO:0055114 KEGG: 00260+1.1.1.3+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+1.1.1.3+2.7.2.4|KEGG: 00300+1.1.1.3+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 AM378_18685 6d6e29926e47f2ae8a55a28c516dfc7c 811 Gene3D G3DSA:3.30.360.10 620 790 4.5E-104 T 15-10-2018 AM378_18685 6d6e29926e47f2ae8a55a28c516dfc7c 811 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 655 677 - T 15-10-2018 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 AM378_18685 6d6e29926e47f2ae8a55a28c516dfc7c 811 Gene3D G3DSA:1.20.120.1320 52 146 9.3E-73 T 15-10-2018 AM378_18685 6d6e29926e47f2ae8a55a28c516dfc7c 811 SUPERFAMILY SSF53633 13 300 7.85E-58 T 15-10-2018 IPR036393 Acetylglutamate kinase-like superfamily AM378_18685 6d6e29926e47f2ae8a55a28c516dfc7c 811 SUPERFAMILY SSF55347 609 792 4.32E-46 T 15-10-2018 AM378_18685 6d6e29926e47f2ae8a55a28c516dfc7c 811 ProSitePatterns PS00324 Aspartokinase signature. 15 23 - T 15-10-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 AM378_18685 6d6e29926e47f2ae8a55a28c516dfc7c 811 Gene3D G3DSA:3.30.2130.10 309 457 6.5E-6 T 15-10-2018 AM378_18685 6d6e29926e47f2ae8a55a28c516dfc7c 811 Gene3D G3DSA:3.40.50.720 461 807 4.5E-104 T 15-10-2018 AM378_18685 6d6e29926e47f2ae8a55a28c516dfc7c 811 SUPERFAMILY SSF51735 458 631 1.07E-31 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily AM378_18685 6d6e29926e47f2ae8a55a28c516dfc7c 811 Pfam PF00742 Homoserine dehydrogenase 609 804 5.1E-43 T 15-10-2018 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 AM378_18685 6d6e29926e47f2ae8a55a28c516dfc7c 811 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 16 454 1.3E-63 T 15-10-2018 IPR001341 Aspartate kinase GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 AM378_18685 6d6e29926e47f2ae8a55a28c516dfc7c 811 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 466 601 2.7E-21 T 15-10-2018 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 AM378_02165 252322412dc62e32ded1898f8a6a6573 474 Gene3D G3DSA:1.20.1250.20 273 470 3.1E-14 T 15-10-2018 AM378_02165 252322412dc62e32ded1898f8a6a6573 474 SUPERFAMILY SSF103473 9 197 1.83E-42 T 15-10-2018 IPR036259 MFS transporter superfamily AM378_02165 252322412dc62e32ded1898f8a6a6573 474 Gene3D G3DSA:1.20.1720.10 15 224 1.5E-44 T 15-10-2018 AM378_02165 252322412dc62e32ded1898f8a6a6573 474 Pfam PF07690 Major Facilitator Superfamily 18 418 2.5E-40 T 15-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM378_02165 252322412dc62e32ded1898f8a6a6573 474 SUPERFAMILY SSF103473 196 466 3.27E-18 T 15-10-2018 IPR036259 MFS transporter superfamily AM378_13755 e08d88e556145c9b2c1ac5f336cc1c4e 777 Pfam PF03288 Poxvirus D5 protein-like 673 772 3.5E-19 T 15-10-2018 IPR004968 DNA primase/nucleoside triphosphatase, C-terminal AM378_13755 e08d88e556145c9b2c1ac5f336cc1c4e 777 SUPERFAMILY SSF52540 477 630 2.66E-16 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_13755 e08d88e556145c9b2c1ac5f336cc1c4e 777 SMART SM00778 32 68 1.1E-17 T 15-10-2018 IPR013237 Bacteriophage T7, Gp4, DNA primase/helicase, N-terminal GO:0003896|GO:0004386|GO:0008270 AM378_13755 e08d88e556145c9b2c1ac5f336cc1c4e 777 Gene3D G3DSA:3.40.50.300 460 644 3.0E-11 T 15-10-2018 AM378_13755 e08d88e556145c9b2c1ac5f336cc1c4e 777 Pfam PF08706 D5 N terminal like 373 470 5.7E-8 T 15-10-2018 IPR014818 Bacteriophage/plasmid primase, P4, C-terminal AM378_13755 e08d88e556145c9b2c1ac5f336cc1c4e 777 Pfam PF13362 Toprim domain 214 304 1.4E-11 T 15-10-2018 IPR006171 TOPRIM domain AM378_13755 e08d88e556145c9b2c1ac5f336cc1c4e 777 SUPERFAMILY SSF46785 674 772 2.04E-38 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM378_13755 e08d88e556145c9b2c1ac5f336cc1c4e 777 SMART SM00885 339 466 1.7E-20 T 15-10-2018 IPR014818 Bacteriophage/plasmid primase, P4, C-terminal AM378_13755 e08d88e556145c9b2c1ac5f336cc1c4e 777 Pfam PF08273 Zinc-binding domain of primase-helicase 32 68 3.7E-17 T 15-10-2018 IPR013237 Bacteriophage T7, Gp4, DNA primase/helicase, N-terminal GO:0003896|GO:0004386|GO:0008270 AM378_13755 e08d88e556145c9b2c1ac5f336cc1c4e 777 Gene3D G3DSA:1.10.10.10 674 773 1.2E-38 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_13755 e08d88e556145c9b2c1ac5f336cc1c4e 777 SUPERFAMILY SSF57783 30 92 1.62E-7 T 15-10-2018 AM378_21410 6c06f84ee2518cf2cdcff6bc52cb404a 323 SUPERFAMILY SSF111369 38 94 2.35E-7 T 15-10-2018 AM378_21410 6c06f84ee2518cf2cdcff6bc52cb404a 323 Gene3D G3DSA:1.10.287.470 73 95 6.5E-10 T 15-10-2018 AM378_21410 6c06f84ee2518cf2cdcff6bc52cb404a 323 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 131 284 1.9E-10 T 15-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AM378_21410 6c06f84ee2518cf2cdcff6bc52cb404a 323 Gene3D G3DSA:1.10.287.470 102 169 2.1E-12 T 15-10-2018 AM378_21410 6c06f84ee2518cf2cdcff6bc52cb404a 323 Gene3D G3DSA:2.40.50.100 39 72 6.5E-10 T 15-10-2018 AM378_21410 6c06f84ee2518cf2cdcff6bc52cb404a 323 SUPERFAMILY SSF111369 176 253 1.18E-6 T 15-10-2018 AM378_21410 6c06f84ee2518cf2cdcff6bc52cb404a 323 Gene3D G3DSA:2.40.30.170 214 320 1.5E-12 T 15-10-2018 AM378_21410 6c06f84ee2518cf2cdcff6bc52cb404a 323 Pfam PF13533 Biotin-lipoyl like 40 85 4.8E-11 T 15-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain AM378_23885 19cb0e33b24bb8c96161d8da2a870f05 287 PIRSF PIRSF005215 1 287 2.9E-130 T 15-10-2018 IPR014431 Tellurite resistance methyltransferase, TehB type-2 AM378_23885 19cb0e33b24bb8c96161d8da2a870f05 287 Pfam PF09313 Domain of unknown function (DUF1971) 9 89 1.9E-29 T 15-10-2018 IPR015392 Domain of unknown function DUF1971 AM378_23885 19cb0e33b24bb8c96161d8da2a870f05 287 SUPERFAMILY SSF53335 98 269 1.37E-25 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM378_23885 19cb0e33b24bb8c96161d8da2a870f05 287 Pfam PF03848 Tellurite resistance protein TehB 91 283 4.4E-94 T 15-10-2018 IPR015985 Tellurite resistance methyltransferase TehB-like domain AM378_23885 19cb0e33b24bb8c96161d8da2a870f05 287 SUPERFAMILY SSF51197 2 102 8.79E-35 T 15-10-2018 AM378_23885 19cb0e33b24bb8c96161d8da2a870f05 287 Gene3D G3DSA:3.40.50.150 108 287 2.7E-38 T 15-10-2018 AM378_23885 19cb0e33b24bb8c96161d8da2a870f05 287 Gene3D G3DSA:2.60.120.10 1 107 1.7E-38 T 15-10-2018 IPR014710 RmlC-like jelly roll fold AM378_23885 19cb0e33b24bb8c96161d8da2a870f05 287 TIGRFAM TIGR00477 tehB: tellurite resistance protein TehB 49 286 1.4E-102 T 15-10-2018 IPR004537 Tellurite resistance methyltransferase, TehB GO:0005737|GO:0008757|GO:0046690 AM378_17455 c039418685ee9661feed6bbadd31e155 117 Gene3D G3DSA:3.30.420.100 1 117 7.3E-47 T 15-10-2018 AM378_17455 c039418685ee9661feed6bbadd31e155 117 Hamap MF_01337_B 50S ribosomal protein L18 [rplR]. 2 117 26.177 T 15-10-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM378_17455 c039418685ee9661feed6bbadd31e155 117 SUPERFAMILY SSF53137 3 115 1.33E-53 T 15-10-2018 AM378_17455 c039418685ee9661feed6bbadd31e155 117 Pfam PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 1 117 9.2E-44 T 15-10-2018 IPR005484 Ribosomal protein L18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM378_17455 c039418685ee9661feed6bbadd31e155 117 TIGRFAM TIGR00060 L18_bact: ribosomal protein uL18 3 117 4.9E-46 T 15-10-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM378_06005 2abec6b036fe089803da661d4099d64f 209 PIRSF PIRSF006091 1 202 2.2E-73 T 15-10-2018 IPR010209 Ion-translocating oxidoreductase complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 AM378_06005 2abec6b036fe089803da661d4099d64f 209 Hamap MF_00479 Ion-translocating oxidoreductase complex subunit G [rsxG]. 2 194 26.812 T 15-10-2018 IPR010209 Ion-translocating oxidoreductase complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 AM378_06005 2abec6b036fe089803da661d4099d64f 209 TIGRFAM TIGR01947 rnfG: electron transport complex, RnfABCDGE type, G subunit 10 193 3.7E-67 T 15-10-2018 IPR010209 Ion-translocating oxidoreductase complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 AM378_06005 2abec6b036fe089803da661d4099d64f 209 Pfam PF04205 FMN-binding domain 100 187 4.8E-18 T 15-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 AM378_06005 2abec6b036fe089803da661d4099d64f 209 SMART SM00900 100 192 1.9E-34 T 15-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 AM378_00905 fe9eb66118fb5e1e76d7e689979ceaf7 211 SUPERFAMILY SSF46785 54 150 3.55E-22 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM378_00905 fe9eb66118fb5e1e76d7e689979ceaf7 211 Gene3D G3DSA:1.10.10.10 40 154 3.1E-24 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_00905 fe9eb66118fb5e1e76d7e689979ceaf7 211 Pfam PF03551 Transcriptional regulator PadR-like family 59 128 2.5E-18 T 15-10-2018 IPR005149 Transcription regulator PadR, N-terminal AM378_07295 8f46dcd4ba23fe4c65bfe793c9a1b5c5 1034 SUPERFAMILY SSF82693 564 670 2.98E-25 T 15-10-2018 AM378_07295 8f46dcd4ba23fe4c65bfe793c9a1b5c5 1034 Pfam PF00873 AcrB/AcrD/AcrF family 3 1023 0.0 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AM378_07295 8f46dcd4ba23fe4c65bfe793c9a1b5c5 1034 Gene3D G3DSA:3.30.70.1440 668 863 0.0 T 15-10-2018 AM378_07295 8f46dcd4ba23fe4c65bfe793c9a1b5c5 1034 Gene3D G3DSA:3.30.70.1320 134 333 0.0 T 15-10-2018 AM378_07295 8f46dcd4ba23fe4c65bfe793c9a1b5c5 1034 Gene3D G3DSA:1.20.1640.10 9 511 0.0 T 15-10-2018 AM378_07295 8f46dcd4ba23fe4c65bfe793c9a1b5c5 1034 Gene3D G3DSA:3.30.70.1430 39 816 0.0 T 15-10-2018 AM378_07295 8f46dcd4ba23fe4c65bfe793c9a1b5c5 1034 SUPERFAMILY SSF82714 722 805 4.71E-19 T 15-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AM378_07295 8f46dcd4ba23fe4c65bfe793c9a1b5c5 1034 Gene3D G3DSA:3.30.70.1430 566 667 0.0 T 15-10-2018 AM378_07295 8f46dcd4ba23fe4c65bfe793c9a1b5c5 1034 SUPERFAMILY SSF82866 836 1022 5.1E-40 T 15-10-2018 AM378_07295 8f46dcd4ba23fe4c65bfe793c9a1b5c5 1034 PRINTS PR00702 Acriflavin resistance protein family signature 551 568 1.3E-103 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AM378_07295 8f46dcd4ba23fe4c65bfe793c9a1b5c5 1034 PRINTS PR00702 Acriflavin resistance protein family signature 364 385 1.3E-103 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AM378_07295 8f46dcd4ba23fe4c65bfe793c9a1b5c5 1034 PRINTS PR00702 Acriflavin resistance protein family signature 392 416 1.3E-103 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AM378_07295 8f46dcd4ba23fe4c65bfe793c9a1b5c5 1034 PRINTS PR00702 Acriflavin resistance protein family signature 446 469 1.3E-103 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AM378_07295 8f46dcd4ba23fe4c65bfe793c9a1b5c5 1034 PRINTS PR00702 Acriflavin resistance protein family signature 471 494 1.3E-103 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AM378_07295 8f46dcd4ba23fe4c65bfe793c9a1b5c5 1034 PRINTS PR00702 Acriflavin resistance protein family signature 620 634 1.3E-103 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AM378_07295 8f46dcd4ba23fe4c65bfe793c9a1b5c5 1034 PRINTS PR00702 Acriflavin resistance protein family signature 9 33 1.3E-103 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AM378_07295 8f46dcd4ba23fe4c65bfe793c9a1b5c5 1034 PRINTS PR00702 Acriflavin resistance protein family signature 37 55 1.3E-103 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AM378_07295 8f46dcd4ba23fe4c65bfe793c9a1b5c5 1034 PRINTS PR00702 Acriflavin resistance protein family signature 337 360 1.3E-103 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AM378_07295 8f46dcd4ba23fe4c65bfe793c9a1b5c5 1034 Gene3D G3DSA:3.30.2090.10 180 276 0.0 T 15-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AM378_07295 8f46dcd4ba23fe4c65bfe793c9a1b5c5 1034 SUPERFAMILY SSF82866 297 497 1.28E-48 T 15-10-2018 AM378_07295 8f46dcd4ba23fe4c65bfe793c9a1b5c5 1034 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 2 1029 0.0 T 15-10-2018 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0006855|GO:0015562|GO:0016021 AM378_07295 8f46dcd4ba23fe4c65bfe793c9a1b5c5 1034 Gene3D G3DSA:3.30.2090.10 720 808 0.0 T 15-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AM378_07295 8f46dcd4ba23fe4c65bfe793c9a1b5c5 1034 SUPERFAMILY SSF82693 137 331 3.66E-25 T 15-10-2018 AM378_07295 8f46dcd4ba23fe4c65bfe793c9a1b5c5 1034 SUPERFAMILY SSF82693 39 132 3.92E-28 T 15-10-2018 AM378_07295 8f46dcd4ba23fe4c65bfe793c9a1b5c5 1034 SUPERFAMILY SSF82693 671 853 1.1E-19 T 15-10-2018 AM378_07295 8f46dcd4ba23fe4c65bfe793c9a1b5c5 1034 Gene3D G3DSA:1.20.1640.10 512 1020 0.0 T 15-10-2018 AM378_07295 8f46dcd4ba23fe4c65bfe793c9a1b5c5 1034 SUPERFAMILY SSF82714 183 273 1.22E-22 T 15-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AM378_07090 830a21af15d9aa80f76048e875c4ec9e 729 Pfam PF07715 TonB-dependent Receptor Plug Domain 76 179 2.2E-19 T 15-10-2018 IPR012910 TonB-dependent receptor, plug domain AM378_07090 830a21af15d9aa80f76048e875c4ec9e 729 Pfam PF00593 TonB dependent receptor 264 728 4.6E-62 T 15-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel AM378_07090 830a21af15d9aa80f76048e875c4ec9e 729 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 78 728 3.0E-123 T 15-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 AM378_07090 830a21af15d9aa80f76048e875c4ec9e 729 Gene3D G3DSA:2.170.130.10 53 188 7.6E-34 T 15-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily AM378_07090 830a21af15d9aa80f76048e875c4ec9e 729 Gene3D G3DSA:2.40.170.20 189 729 2.3E-136 T 15-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AM378_07090 830a21af15d9aa80f76048e875c4ec9e 729 SUPERFAMILY SSF56935 37 729 1.18E-133 T 15-10-2018 AM378_23545 577f2b08285c2f723e9184eb9f9a1de1 267 Gene3D G3DSA:3.60.20.10 1 258 2.1E-96 T 15-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AM378_23545 577f2b08285c2f723e9184eb9f9a1de1 267 Pfam PF13230 Glutamine amidotransferases class-II 1 254 1.2E-114 T 15-10-2018 IPR026869 Putative glutamine amidotransferase type 2 AM378_23545 577f2b08285c2f723e9184eb9f9a1de1 267 SUPERFAMILY SSF56235 2 253 7.72E-52 T 15-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AM378_13070 f00972044676876e8df4a5d8a1feeda3 317 Pfam PF00248 Aldo/keto reductase family 16 314 2.5E-71 T 15-10-2018 IPR023210 NADP-dependent oxidoreductase domain AM378_13070 f00972044676876e8df4a5d8a1feeda3 317 PRINTS PR00069 Aldo-keto reductase signature 110 128 2.2E-6 T 15-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AM378_13070 f00972044676876e8df4a5d8a1feeda3 317 PRINTS PR00069 Aldo-keto reductase signature 141 158 2.2E-6 T 15-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AM378_13070 f00972044676876e8df4a5d8a1feeda3 317 SUPERFAMILY SSF51430 1 314 5.24E-94 T 15-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily AM378_13070 f00972044676876e8df4a5d8a1feeda3 317 Gene3D G3DSA:3.20.20.100 1 317 3.6E-103 T 15-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily AM378_03070 60d77acff5c195135eb14aeacd571467 254 SMART SM00420 8 57 6.3E-8 T 15-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AM378_03070 60d77acff5c195135eb14aeacd571467 254 Pfam PF00455 DeoR C terminal sensor domain 77 235 2.7E-46 T 15-10-2018 IPR014036 DeoR C-terminal sensor domain AM378_03070 60d77acff5c195135eb14aeacd571467 254 ProSitePatterns PS00894 DeoR-type HTH domain signature. 8 42 - T 15-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 AM378_03070 60d77acff5c195135eb14aeacd571467 254 SUPERFAMILY SSF100950 76 238 5.65E-27 T 15-10-2018 IPR037171 NagB/RpiA transferase-like AM378_03070 60d77acff5c195135eb14aeacd571467 254 SMART SM01134 75 236 7.7E-65 T 15-10-2018 AM378_03070 60d77acff5c195135eb14aeacd571467 254 Pfam PF08220 DeoR-like helix-turn-helix domain 8 53 5.0E-10 T 15-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AM378_17855 961ade1fadb0cb4cbc52f7b83dcc0f14 852 SUPERFAMILY SSF53955 43 257 7.31E-82 T 15-10-2018 IPR023346 Lysozyme-like domain superfamily AM378_17855 961ade1fadb0cb4cbc52f7b83dcc0f14 852 Gene3D G3DSA:3.40.710.10 656 832 1.3E-23 T 15-10-2018 AM378_17855 961ade1fadb0cb4cbc52f7b83dcc0f14 852 Gene3D G3DSA:3.40.710.10 398 655 1.8E-67 T 15-10-2018 AM378_17855 961ade1fadb0cb4cbc52f7b83dcc0f14 852 Pfam PF17092 Penicillin-binding protein OB-like domain 316 425 4.6E-31 T 15-10-2018 IPR031376 Penicillin-binding protein, OB-like domain KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AM378_17855 961ade1fadb0cb4cbc52f7b83dcc0f14 852 SUPERFAMILY SSF56601 211 836 3.76E-113 T 15-10-2018 IPR012338 Beta-lactamase/transpeptidase-like AM378_17855 961ade1fadb0cb4cbc52f7b83dcc0f14 852 Gene3D G3DSA:3.40.710.10 243 366 5.9E-11 T 15-10-2018 AM378_17855 961ade1fadb0cb4cbc52f7b83dcc0f14 852 Pfam PF00905 Penicillin binding protein transpeptidase domain 429 610 1.5E-24 T 15-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 AM378_17855 961ade1fadb0cb4cbc52f7b83dcc0f14 852 Gene3D G3DSA:1.10.3810.10 48 242 1.4E-80 T 15-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AM378_17855 961ade1fadb0cb4cbc52f7b83dcc0f14 852 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 65 786 2.4E-172 T 15-10-2018 AM378_17855 961ade1fadb0cb4cbc52f7b83dcc0f14 852 Pfam PF00912 Transglycosylase 55 229 1.6E-65 T 15-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AM378_04295 f14af77f4e9827fc3e719de69f933832 95 Pfam PF03992 Antibiotic biosynthesis monooxygenase 3 77 1.2E-18 T 15-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain AM378_04295 f14af77f4e9827fc3e719de69f933832 95 SUPERFAMILY SSF54909 3 83 1.53E-26 T 15-10-2018 IPR011008 Dimeric alpha-beta barrel AM378_04295 f14af77f4e9827fc3e719de69f933832 95 Gene3D G3DSA:3.30.70.100 1 95 1.4E-30 T 15-10-2018 AM378_08605 4109ba713a4967b0ec93d77db5a43fa6 638 Gene3D G3DSA:3.40.50.300 18 281 2.5E-47 T 15-10-2018 AM378_08605 4109ba713a4967b0ec93d77db5a43fa6 638 SMART SM00491 474 603 4.6E-54 T 15-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 AM378_08605 4109ba713a4967b0ec93d77db5a43fa6 638 Pfam PF13307 Helicase C-terminal domain 459 616 7.9E-35 T 15-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 AM378_08605 4109ba713a4967b0ec93d77db5a43fa6 638 SUPERFAMILY SSF52540 39 595 2.82E-21 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_08605 4109ba713a4967b0ec93d77db5a43fa6 638 SMART SM00487 16 342 0.0014 T 15-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AM378_08605 4109ba713a4967b0ec93d77db5a43fa6 638 Pfam PF04851 Type III restriction enzyme, res subunit 18 232 6.4E-5 T 15-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 AM378_08605 4109ba713a4967b0ec93d77db5a43fa6 638 SUPERFAMILY SSF52540 13 232 1.89E-26 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_08605 4109ba713a4967b0ec93d77db5a43fa6 638 Gene3D G3DSA:3.40.50.300 442 634 4.8E-37 T 15-10-2018 AM378_11810 e19c7c65364a2e6db3a25be68d71382e 404 Gene3D G3DSA:3.40.640.10 53 294 3.8E-149 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AM378_11810 e19c7c65364a2e6db3a25be68d71382e 404 Pfam PF00155 Aminotransferase class I and II 58 388 1.4E-48 T 15-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AM378_11810 e19c7c65364a2e6db3a25be68d71382e 404 Gene3D G3DSA:3.90.1150.10 21 398 3.8E-149 T 15-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AM378_11810 e19c7c65364a2e6db3a25be68d71382e 404 SUPERFAMILY SSF53383 7 402 8.16E-97 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM378_17440 508232d7eca785fea812e05998841785 144 TIGRFAM TIGR01071 rplO_bact: ribosomal protein uL15 2 143 2.1E-50 T 15-10-2018 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM378_17440 508232d7eca785fea812e05998841785 144 Pfam PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 28 143 1.3E-30 T 15-10-2018 IPR021131 Ribosomal protein L18e/L15P AM378_17440 508232d7eca785fea812e05998841785 144 SUPERFAMILY SSF52080 4 143 3.53E-46 T 15-10-2018 IPR036227 Ribosomal L18e/L15P superfamily AM378_17440 508232d7eca785fea812e05998841785 144 Gene3D G3DSA:3.100.10.10 70 144 1.1E-10 T 15-10-2018 AM378_17440 508232d7eca785fea812e05998841785 144 Hamap MF_01341 50S ribosomal protein L15 [rplO]. 3 144 19.188 T 15-10-2018 IPR030878 Ribosomal protein L15 GO:0003735|GO:0006412|GO:0015934 AM378_17440 508232d7eca785fea812e05998841785 144 ProSitePatterns PS00475 Ribosomal protein L15 signature. 109 139 - T 15-10-2018 IPR001196 Ribosomal protein L15, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM378_13685 482d9f3288dd4aa8cf5bcca6d32a697d 112 Hamap MF_00925 Outer membrane protein assembly factor BamE [bamE]. 4 112 32.992 T 15-10-2018 IPR026592 Outer membrane protein assembly factor BamE AM378_13685 482d9f3288dd4aa8cf5bcca6d32a697d 112 Pfam PF04355 SmpA / OmlA family 35 104 1.7E-27 T 15-10-2018 IPR007450 Lipoprotein SmpA/OmlA GO:0019867 AM378_13685 482d9f3288dd4aa8cf5bcca6d32a697d 112 Gene3D G3DSA:3.30.1450.10 34 112 3.2E-31 T 15-10-2018 IPR037873 BamE-like AM378_06835 56a1a410d6acc877bf0e8dc17fc3e88b 378 SUPERFAMILY SSF102114 11 320 1.44E-74 T 15-10-2018 AM378_06835 56a1a410d6acc877bf0e8dc17fc3e88b 378 Pfam PF13353 4Fe-4S single cluster domain 20 103 1.5E-5 T 15-10-2018 AM378_06835 56a1a410d6acc877bf0e8dc17fc3e88b 378 SMART SM00729 13 220 0.002 T 15-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 AM378_06835 56a1a410d6acc877bf0e8dc17fc3e88b 378 Pfam PF04055 Radical SAM superfamily 19 172 6.0E-21 T 15-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AM378_06835 56a1a410d6acc877bf0e8dc17fc3e88b 378 PIRSF PIRSF037420 2 359 4.7E-128 T 15-10-2018 IPR017200 Coenzyme PQQ synthesis protein E AM378_06835 56a1a410d6acc877bf0e8dc17fc3e88b 378 ProSitePatterns PS01305 moaA / nifB / pqqE family signature. 19 30 - T 15-10-2018 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO:0003824|GO:0046872|GO:0051539 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AM378_06835 56a1a410d6acc877bf0e8dc17fc3e88b 378 Gene3D G3DSA:3.20.20.70 13 292 2.0E-46 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM378_06835 56a1a410d6acc877bf0e8dc17fc3e88b 378 Hamap MF_00660 Coenzyme PQQ synthesis protein E [pqqE]. 1 378 189.34 T 15-10-2018 IPR011843 Coenzyme PQQ biosynthesis protein E, bacteria GO:0018189|GO:0051539 AM378_06835 56a1a410d6acc877bf0e8dc17fc3e88b 378 TIGRFAM TIGR02109 PQQ_syn_pqqE: coenzyme PQQ biosynthesis enzyme PqqE 8 368 4.9E-183 T 15-10-2018 IPR011843 Coenzyme PQQ biosynthesis protein E, bacteria GO:0018189|GO:0051539 AM378_09645 ab9daec794e1b3f25dfcd7e58815811a 138 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 57 127 2.5E-25 T 15-10-2018 IPR001543 Surface presentation of antigen (SpoA) AM378_09645 ab9daec794e1b3f25dfcd7e58815811a 138 TIGRFAM TIGR02480 fliN: flagellar motor switch protein FliN 54 129 1.7E-33 T 15-10-2018 IPR012826 Flagellar motor switch FliN GO:0006935|GO:0009288|GO:0016020|GO:0071973 AM378_09645 ab9daec794e1b3f25dfcd7e58815811a 138 Gene3D G3DSA:2.30.330.10 44 138 3.2E-35 T 15-10-2018 IPR036429 SpoA-like superfamily AM378_09645 ab9daec794e1b3f25dfcd7e58815811a 138 PRINTS PR00956 Flagellar motor switch protein FliN signature 90 103 2.2E-30 T 15-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 AM378_09645 ab9daec794e1b3f25dfcd7e58815811a 138 PRINTS PR00956 Flagellar motor switch protein FliN signature 103 118 2.2E-30 T 15-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 AM378_09645 ab9daec794e1b3f25dfcd7e58815811a 138 PRINTS PR00956 Flagellar motor switch protein FliN signature 57 73 2.2E-30 T 15-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 AM378_09645 ab9daec794e1b3f25dfcd7e58815811a 138 PRINTS PR00956 Flagellar motor switch protein FliN signature 74 90 2.2E-30 T 15-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 AM378_09645 ab9daec794e1b3f25dfcd7e58815811a 138 Pfam PF16973 Flagellar motor switch protein FliN N-terminal 1 50 1.0E-24 T 15-10-2018 IPR031576 Flagellar motor switch protein FliN, N-terminal AM378_09645 ab9daec794e1b3f25dfcd7e58815811a 138 SUPERFAMILY SSF101801 55 136 8.63E-27 T 15-10-2018 IPR036429 SpoA-like superfamily AM378_03095 b7ce51919742dd36c70ae53d0a965751 281 SUPERFAMILY SSF53167 29 278 5.11E-43 T 15-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 AM378_03095 b7ce51919742dd36c70ae53d0a965751 281 Gene3D G3DSA:3.40.50.1580 27 278 2.8E-77 T 15-10-2018 AM378_03095 b7ce51919742dd36c70ae53d0a965751 281 Pfam PF01048 Phosphorylase superfamily 31 271 9.9E-37 T 15-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 AM378_02230 3cda7362cb63df39fabb10a9eeb414c3 247 Gene3D G3DSA:3.40.190.10 34 242 5.1E-86 T 15-10-2018 AM378_02230 3cda7362cb63df39fabb10a9eeb414c3 247 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 26 243 6.3E-70 T 15-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AM378_02230 3cda7362cb63df39fabb10a9eeb414c3 247 SUPERFAMILY SSF53850 8 244 4.3E-74 T 15-10-2018 AM378_02230 3cda7362cb63df39fabb10a9eeb414c3 247 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 47 60 - T 15-10-2018 IPR018313 Solute-binding protein family 3, conserved site AM378_02230 3cda7362cb63df39fabb10a9eeb414c3 247 SMART SM00079 25 244 5.6E-8 T 15-10-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 AM378_02230 3cda7362cb63df39fabb10a9eeb414c3 247 Gene3D G3DSA:3.40.190.10 109 204 5.1E-86 T 15-10-2018 AM378_02230 3cda7362cb63df39fabb10a9eeb414c3 247 SMART SM00062 25 245 1.7E-70 T 15-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AM378_11620 467adb77ca228ae83226ffd273a445a9 880 SMART SM00434 11 499 9.4E-301 T 15-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AM378_11620 467adb77ca228ae83226ffd273a445a9 880 Hamap MF_01897 DNA gyrase subunit A [gyrA]. 1 841 24.671 T 15-10-2018 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AM378_11620 467adb77ca228ae83226ffd273a445a9 880 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 743 789 3.0E-13 T 15-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 AM378_11620 467adb77ca228ae83226ffd273a445a9 880 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 693 737 5.9E-16 T 15-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 AM378_11620 467adb77ca228ae83226ffd273a445a9 880 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 793 839 1.4E-12 T 15-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 AM378_11620 467adb77ca228ae83226ffd273a445a9 880 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 588 637 3.5E-11 T 15-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 AM378_11620 467adb77ca228ae83226ffd273a445a9 880 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 645 688 1.4E-8 T 15-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 AM378_11620 467adb77ca228ae83226ffd273a445a9 880 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 538 584 2.4E-10 T 15-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 AM378_11620 467adb77ca228ae83226ffd273a445a9 880 SUPERFAMILY SSF56719 30 521 9.29E-183 T 15-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 AM378_11620 467adb77ca228ae83226ffd273a445a9 880 Gene3D G3DSA:1.10.268.10 370 493 1.8E-234 T 15-10-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily GO:0003677|GO:0003918|GO:0005524 Reactome: R-HSA-4615885 AM378_11620 467adb77ca228ae83226ffd273a445a9 880 Gene3D G3DSA:2.120.10.90 535 841 1.2E-131 T 15-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal AM378_11620 467adb77ca228ae83226ffd273a445a9 880 SUPERFAMILY SSF101904 533 850 3.01E-114 T 15-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal AM378_11620 467adb77ca228ae83226ffd273a445a9 880 Gene3D G3DSA:3.90.199.10 33 521 1.8E-234 T 15-10-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 AM378_11620 467adb77ca228ae83226ffd273a445a9 880 Gene3D G3DSA:3.30.1360.40 236 333 1.8E-234 T 15-10-2018 AM378_11620 467adb77ca228ae83226ffd273a445a9 880 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 32 506 8.0E-153 T 15-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AM378_11620 467adb77ca228ae83226ffd273a445a9 880 TIGRFAM TIGR01063 gyrA: DNA gyrase, A subunit 8 840 0.0 T 15-10-2018 AM378_22005 0a93d880bbec9b2b063ae55e1ef2ae47 416 SMART SM00155 338 365 4.7E-5 T 15-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 AM378_22005 0a93d880bbec9b2b063ae55e1ef2ae47 416 SMART SM00155 143 170 1.3E-5 T 15-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 AM378_22005 0a93d880bbec9b2b063ae55e1ef2ae47 416 SUPERFAMILY SSF56024 56 217 3.14E-31 T 15-10-2018 AM378_22005 0a93d880bbec9b2b063ae55e1ef2ae47 416 Pfam PF13091 PLD-like domain 66 198 1.2E-21 T 15-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 AM378_22005 0a93d880bbec9b2b063ae55e1ef2ae47 416 Pfam PF13091 PLD-like domain 249 393 3.9E-15 T 15-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 AM378_22005 0a93d880bbec9b2b063ae55e1ef2ae47 416 Gene3D G3DSA:3.30.870.10 39 201 4.2E-29 T 15-10-2018 AM378_22005 0a93d880bbec9b2b063ae55e1ef2ae47 416 SUPERFAMILY SSF56024 239 408 4.04E-28 T 15-10-2018 AM378_22005 0a93d880bbec9b2b063ae55e1ef2ae47 416 Gene3D G3DSA:3.30.870.10 240 397 1.1E-21 T 15-10-2018 AM378_06795 eefd963c40100d7090049dbbfe3e16c7 225 Pfam PF00392 Bacterial regulatory proteins, gntR family 21 75 3.9E-16 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM378_06795 eefd963c40100d7090049dbbfe3e16c7 225 SMART SM00345 20 78 4.8E-17 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM378_06795 eefd963c40100d7090049dbbfe3e16c7 225 Gene3D G3DSA:1.10.10.10 7 79 2.5E-19 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_06795 eefd963c40100d7090049dbbfe3e16c7 225 Gene3D G3DSA:1.20.120.530 82 219 7.1E-19 T 15-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AM378_06795 eefd963c40100d7090049dbbfe3e16c7 225 SUPERFAMILY SSF46785 13 85 2.41E-17 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM378_06795 eefd963c40100d7090049dbbfe3e16c7 225 SMART SM00895 88 212 1.8E-11 T 15-10-2018 IPR011711 GntR, C-terminal AM378_06795 eefd963c40100d7090049dbbfe3e16c7 225 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 52 68 2.3E-6 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM378_06795 eefd963c40100d7090049dbbfe3e16c7 225 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 38 52 2.3E-6 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM378_06795 eefd963c40100d7090049dbbfe3e16c7 225 Pfam PF07729 FCD domain 88 211 6.9E-18 T 15-10-2018 IPR011711 GntR, C-terminal AM378_06795 eefd963c40100d7090049dbbfe3e16c7 225 SUPERFAMILY SSF48008 87 216 2.59E-18 T 15-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AM378_08025 8eadb673e1f86b63f68a0107d3265318 197 TIGRFAM TIGR00505 ribA: GTP cyclohydrolase II 5 194 3.1E-92 T 15-10-2018 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 AM378_08025 8eadb673e1f86b63f68a0107d3265318 197 Gene3D G3DSA:3.40.50.10990 1 174 6.2E-77 T 15-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 AM378_08025 8eadb673e1f86b63f68a0107d3265318 197 Hamap MF_00179 GTP cyclohydrolase-2 [ribA]. 1 196 48.169 T 15-10-2018 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 AM378_08025 8eadb673e1f86b63f68a0107d3265318 197 SUPERFAMILY SSF142695 3 173 2.48E-66 T 15-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 AM378_08025 8eadb673e1f86b63f68a0107d3265318 197 Pfam PF00925 GTP cyclohydrolase II 5 170 1.3E-67 T 15-10-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 AM378_22240 af4fa136bc39a75fda28ae7c343b6045 361 Gene3D G3DSA:3.30.70.270 177 351 2.9E-50 T 15-10-2018 AM378_22240 af4fa136bc39a75fda28ae7c343b6045 361 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 188 349 6.3E-44 T 15-10-2018 IPR000160 GGDEF domain AM378_22240 af4fa136bc39a75fda28ae7c343b6045 361 Pfam PF00990 Diguanylate cyclase, GGDEF domain 191 345 1.2E-45 T 15-10-2018 IPR000160 GGDEF domain AM378_22240 af4fa136bc39a75fda28ae7c343b6045 361 SMART SM00267 179 349 4.9E-56 T 15-10-2018 IPR000160 GGDEF domain AM378_22240 af4fa136bc39a75fda28ae7c343b6045 361 SUPERFAMILY SSF55073 195 348 1.33E-42 T 15-10-2018 IPR029787 Nucleotide cyclase AM378_00385 2e5c55bf0f15d4b3d6fac45baaabe1b1 133 Pfam PF13411 MerR HTH family regulatory protein 1 67 9.3E-19 T 15-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM378_00385 2e5c55bf0f15d4b3d6fac45baaabe1b1 133 Gene3D G3DSA:1.10.1660.10 1 125 5.1E-32 T 15-10-2018 AM378_00385 2e5c55bf0f15d4b3d6fac45baaabe1b1 133 SMART SM00422 1 70 1.2E-28 T 15-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM378_00385 2e5c55bf0f15d4b3d6fac45baaabe1b1 133 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 26 8.3E-7 T 15-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM378_00385 2e5c55bf0f15d4b3d6fac45baaabe1b1 133 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 37 57 8.3E-7 T 15-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM378_00385 2e5c55bf0f15d4b3d6fac45baaabe1b1 133 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 2 13 8.3E-7 T 15-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM378_00385 2e5c55bf0f15d4b3d6fac45baaabe1b1 133 SUPERFAMILY SSF46955 1 126 4.76E-35 T 15-10-2018 IPR009061 Putative DNA-binding domain superfamily AM378_00385 2e5c55bf0f15d4b3d6fac45baaabe1b1 133 TIGRFAM TIGR02044 CueR: Cu(I)-responsive transcriptional regulator 1 126 2.0E-59 T 15-10-2018 IPR011789 Cu(I)-responsive transcriptional regulator GO:0003677|GO:0003700|GO:0005507|GO:0045893 AM378_06490 cc75908796e3228f747e030f8b0f65c5 618 SUPERFAMILY SSF55604 9 79 3.79E-19 T 15-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 AM378_06490 cc75908796e3228f747e030f8b0f65c5 618 Gene3D G3DSA:2.70.70.10 453 612 1.5E-48 T 15-10-2018 IPR011055 Duplicated hybrid motif AM378_06490 cc75908796e3228f747e030f8b0f65c5 618 Pfam PF02378 Phosphotransferase system, EIIC 106 386 3.1E-32 T 15-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 AM378_06490 cc75908796e3228f747e030f8b0f65c5 618 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 467 590 1.2E-44 T 15-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 AM378_06490 cc75908796e3228f747e030f8b0f65c5 618 ProSitePatterns PS00371 PTS EIIA domains phosphorylation site signature 1. 529 541 - T 15-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 AM378_06490 cc75908796e3228f747e030f8b0f65c5 618 TIGRFAM TIGR01995 PTS-II-ABC-beta: PTS system, beta-glucoside-specific IIABC component 3 610 2.3E-208 T 15-10-2018 IPR011297 Phosphotransferase system, beta-glucoside-specific IIABC component GO:0005886|GO:0008982|GO:0009401 AM378_06490 cc75908796e3228f747e030f8b0f65c5 618 TIGRFAM TIGR00830 PTBA: PTS system, glucose subfamily, IIA component 467 587 8.6E-40 T 15-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 AM378_06490 cc75908796e3228f747e030f8b0f65c5 618 Gene3D G3DSA:3.30.1360.60 1 76 1.1E-23 T 15-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 AM378_06490 cc75908796e3228f747e030f8b0f65c5 618 SUPERFAMILY SSF51261 463 610 1.03E-48 T 15-10-2018 IPR011055 Duplicated hybrid motif AM378_06490 cc75908796e3228f747e030f8b0f65c5 618 Pfam PF00367 phosphotransferase system, EIIB 9 41 2.1E-13 T 15-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 AM378_04890 38bc57c26a57aafc08b823cb2c3b4efc 306 SUPERFAMILY SSF53067 1 301 4.32E-57 T 15-10-2018 AM378_04890 38bc57c26a57aafc08b823cb2c3b4efc 306 Pfam PF00480 ROK family 2 299 3.6E-69 T 15-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 AM378_04890 38bc57c26a57aafc08b823cb2c3b4efc 306 Gene3D G3DSA:3.30.420.40 4 297 1.2E-88 T 15-10-2018 AM378_04890 38bc57c26a57aafc08b823cb2c3b4efc 306 Hamap MF_01271 N-acetyl-D-glucosamine kinase [nagK]. 1 304 66.306 T 15-10-2018 IPR023505 N-acetyl-D-glucosamine kinase GO:0045127 KEGG: 00520+2.7.1.59|MetaCyc: PWY-6517|MetaCyc: PWY-6906 AM378_04890 38bc57c26a57aafc08b823cb2c3b4efc 306 ProSitePatterns PS01125 ROK family signature. 130 157 - T 15-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 AM378_04890 38bc57c26a57aafc08b823cb2c3b4efc 306 Gene3D G3DSA:3.30.420.40 119 290 1.2E-88 T 15-10-2018 AM378_21275 33b9cf771cf20a5773846b3415cebdec 390 Gene3D G3DSA:2.70.210.12 1 158 1.2E-63 T 15-10-2018 IPR036726 GTP1/OBG domain superfamily AM378_21275 33b9cf771cf20a5773846b3415cebdec 390 TIGRFAM TIGR02729 Obg_CgtA: Obg family GTPase CgtA 3 332 1.3E-148 T 15-10-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 AM378_21275 33b9cf771cf20a5773846b3415cebdec 390 Pfam PF01926 50S ribosome-binding GTPase 161 284 1.7E-24 T 15-10-2018 IPR006073 GTP binding domain GO:0005525 AM378_21275 33b9cf771cf20a5773846b3415cebdec 390 ProSitePatterns PS00905 GTP1/OBG family signature. 213 226 - T 15-10-2018 IPR006074 GTP1/OBG, conserved site GO:0005525 AM378_21275 33b9cf771cf20a5773846b3415cebdec 390 PIRSF PIRSF002401 1 375 9.4E-142 T 15-10-2018 IPR035101 GTP-binding protein, Obg-type AM378_21275 33b9cf771cf20a5773846b3415cebdec 390 Pfam PF01018 GTP1/OBG 4 156 2.4E-59 T 15-10-2018 IPR006169 GTP1/OBG domain AM378_21275 33b9cf771cf20a5773846b3415cebdec 390 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 228 246 1.2E-34 T 15-10-2018 IPR006073 GTP binding domain GO:0005525 AM378_21275 33b9cf771cf20a5773846b3415cebdec 390 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 183 201 1.2E-34 T 15-10-2018 IPR006073 GTP binding domain GO:0005525 AM378_21275 33b9cf771cf20a5773846b3415cebdec 390 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 162 182 1.2E-34 T 15-10-2018 IPR006073 GTP binding domain GO:0005525 AM378_21275 33b9cf771cf20a5773846b3415cebdec 390 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 211 226 1.2E-34 T 15-10-2018 IPR006073 GTP binding domain GO:0005525 AM378_21275 33b9cf771cf20a5773846b3415cebdec 390 Gene3D G3DSA:3.40.50.300 159 338 1.1E-52 T 15-10-2018 AM378_21275 33b9cf771cf20a5773846b3415cebdec 390 Hamap MF_01454 GTPase Obg [obg]. 2 333 48.279 T 15-10-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 AM378_21275 33b9cf771cf20a5773846b3415cebdec 390 SUPERFAMILY SSF52540 152 336 4.2E-47 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_21275 33b9cf771cf20a5773846b3415cebdec 390 SUPERFAMILY SSF82051 2 157 3.92E-57 T 15-10-2018 IPR036726 GTP1/OBG domain superfamily AM378_13280 d3b3ee6c2acc9f205e4e2766a00bcefe 436 Gene3D G3DSA:1.20.1250.20 230 431 6.6E-27 T 15-10-2018 AM378_13280 d3b3ee6c2acc9f205e4e2766a00bcefe 436 Gene3D G3DSA:1.20.1250.20 14 210 1.2E-45 T 15-10-2018 AM378_13280 d3b3ee6c2acc9f205e4e2766a00bcefe 436 Pfam PF07690 Major Facilitator Superfamily 29 303 3.0E-48 T 15-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM378_13280 d3b3ee6c2acc9f205e4e2766a00bcefe 436 PIRSF PIRSF002808 3 435 1.9E-33 T 15-10-2018 IPR000849 Sugar phosphate transporter GO:0016021|GO:0022857|GO:0055085 AM378_13280 d3b3ee6c2acc9f205e4e2766a00bcefe 436 SUPERFAMILY SSF103473 14 427 4.32E-79 T 15-10-2018 IPR036259 MFS transporter superfamily AM378_15630 8084db175a9f5c2c90cc23c12a3a0336 108 Pfam PF04320 Protein with unknown function (DUF469) 7 107 9.5E-44 T 15-10-2018 IPR007416 Protein of unknown function DUF469 AM378_21940 2f4ea40f5d97789d88f57e1bae2b204f 256 Gene3D G3DSA:3.40.50.720 3 256 1.9E-76 T 15-10-2018 AM378_21940 2f4ea40f5d97789d88f57e1bae2b204f 256 SUPERFAMILY SSF51735 1 255 1.25E-73 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily AM378_21940 2f4ea40f5d97789d88f57e1bae2b204f 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 1.7E-14 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_21940 2f4ea40f5d97789d88f57e1bae2b204f 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 152 171 1.7E-14 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_21940 2f4ea40f5d97789d88f57e1bae2b204f 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 132 140 1.7E-14 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_21940 2f4ea40f5d97789d88f57e1bae2b204f 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 217 237 4.5E-39 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_21940 2f4ea40f5d97789d88f57e1bae2b204f 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 4.5E-39 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_21940 2f4ea40f5d97789d88f57e1bae2b204f 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 4.5E-39 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_21940 2f4ea40f5d97789d88f57e1bae2b204f 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 4.5E-39 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_21940 2f4ea40f5d97789d88f57e1bae2b204f 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 190 4.5E-39 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_21940 2f4ea40f5d97789d88f57e1bae2b204f 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 126 142 4.5E-39 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_21940 2f4ea40f5d97789d88f57e1bae2b204f 256 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 139 167 - T 15-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AM378_21940 2f4ea40f5d97789d88f57e1bae2b204f 256 TIGRFAM TIGR01963 PHB_DH: 3-hydroxybutyrate dehydrogenase 6 256 3.5E-103 T 15-10-2018 IPR011294 3-hydroxybutyrate dehydrogenase GO:0003858|GO:0055114 AM378_21940 2f4ea40f5d97789d88f57e1bae2b204f 256 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 253 4.6E-55 T 15-10-2018 AM378_10890 e63e9627e63b79c4fc53f873a2e51f30 255 SMART SM00382 27 217 1.1E-8 T 15-10-2018 IPR003593 AAA+ ATPase domain AM378_10890 e63e9627e63b79c4fc53f873a2e51f30 255 Gene3D G3DSA:3.40.50.300 1 250 1.7E-54 T 15-10-2018 AM378_10890 e63e9627e63b79c4fc53f873a2e51f30 255 SUPERFAMILY SSF52540 2 209 4.7E-48 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_10890 e63e9627e63b79c4fc53f873a2e51f30 255 Pfam PF00005 ABC transporter 19 159 6.9E-23 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM378_16310 cb974d1965230c14484e006b4b3562a4 194 Pfam PF16452 Bacteriophage CI repressor C-terminal domain 90 190 1.9E-30 T 15-10-2018 IPR032499 Bacteriophage CI repressor, C-terminal GO:0051259 AM378_16310 cb974d1965230c14484e006b4b3562a4 194 Gene3D G3DSA:2.10.109.10 80 194 1.7E-30 T 15-10-2018 AM378_16310 cb974d1965230c14484e006b4b3562a4 194 Pfam PF07022 Bacteriophage CI repressor helix-turn-helix domain 16 76 6.8E-26 T 15-10-2018 IPR010744 Bacteriophage CI repressor GO:0003677|GO:0045892 AM378_16310 cb974d1965230c14484e006b4b3562a4 194 Gene3D G3DSA:1.10.260.40 9 79 2.4E-22 T 15-10-2018 AM378_07750 d3c74c77e06b1c6438954e5bb9df2ac1 75 Pfam PF06667 Phage shock protein B 4 74 8.2E-34 T 15-10-2018 IPR009554 Phage shock protein B GO:0006355|GO:0009271 AM378_07750 d3c74c77e06b1c6438954e5bb9df2ac1 75 TIGRFAM TIGR02976 phageshock_pspB: phage shock protein B 1 74 1.3E-34 T 15-10-2018 IPR009554 Phage shock protein B GO:0006355|GO:0009271 AM378_09020 3729b49507a00ba7284aeb22e0c99b7b 446 TIGRFAM TIGR03241 arg_catab_astB: succinylarginine dihydrolase 3 445 1.8E-248 T 15-10-2018 IPR007079 Succinylarginine dihydrolase GO:0006525|GO:0009015 KEGG: 00330+3.5.3.23 AM378_09020 3729b49507a00ba7284aeb22e0c99b7b 446 Hamap MF_01172 N-succinylarginine dihydrolase [astB]. 1 446 60.151 T 15-10-2018 IPR007079 Succinylarginine dihydrolase GO:0006525|GO:0009015 KEGG: 00330+3.5.3.23 AM378_09020 3729b49507a00ba7284aeb22e0c99b7b 446 SUPERFAMILY SSF55909 4 446 4.71E-208 T 15-10-2018 AM378_09020 3729b49507a00ba7284aeb22e0c99b7b 446 Gene3D G3DSA:3.75.10.20 1 446 2.2E-210 T 15-10-2018 IPR037031 Succinylarginine dihydrolase superfamily GO:0006525|GO:0009015 KEGG: 00330+3.5.3.23 AM378_09020 3729b49507a00ba7284aeb22e0c99b7b 446 Pfam PF04996 Succinylarginine dihydrolase 4 445 1.2E-221 T 15-10-2018 IPR007079 Succinylarginine dihydrolase GO:0006525|GO:0009015 KEGG: 00330+3.5.3.23 AM378_21630 3b1b832ce9d39bfed69addd50dc41d41 339 TIGRFAM TIGR00658 orni_carb_tr: ornithine carbamoyltransferase 10 335 2.3E-136 T 15-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 AM378_21630 3b1b832ce9d39bfed69addd50dc41d41 339 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 55 62 - T 15-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AM378_21630 3b1b832ce9d39bfed69addd50dc41d41 339 Gene3D G3DSA:3.40.50.1370 9 332 2.0E-139 T 15-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 AM378_21630 3b1b832ce9d39bfed69addd50dc41d41 339 Gene3D G3DSA:3.40.50.1370 153 322 2.0E-139 T 15-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 AM378_21630 3b1b832ce9d39bfed69addd50dc41d41 339 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 137 148 2.6E-26 T 15-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AM378_21630 3b1b832ce9d39bfed69addd50dc41d41 339 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 55 74 2.6E-26 T 15-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AM378_21630 3b1b832ce9d39bfed69addd50dc41d41 339 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 300 323 2.6E-26 T 15-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AM378_21630 3b1b832ce9d39bfed69addd50dc41d41 339 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 270 279 2.6E-26 T 15-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AM378_21630 3b1b832ce9d39bfed69addd50dc41d41 339 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 159 333 2.3E-57 T 15-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 AM378_21630 3b1b832ce9d39bfed69addd50dc41d41 339 SUPERFAMILY SSF53671 7 336 3.8E-99 T 15-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 AM378_21630 3b1b832ce9d39bfed69addd50dc41d41 339 Hamap MF_01109 Ornithine carbamoyltransferase, catabolic [argI]. 9 336 84.1 T 15-10-2018 IPR024904 Ornithine carbamoyltransferase GO:0004585|GO:0006591 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 AM378_21630 3b1b832ce9d39bfed69addd50dc41d41 339 PRINTS PR00102 Ornithine carbamoyltransferase signature 53 67 3.3E-32 T 15-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 AM378_21630 3b1b832ce9d39bfed69addd50dc41d41 339 PRINTS PR00102 Ornithine carbamoyltransferase signature 86 99 3.3E-32 T 15-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 AM378_21630 3b1b832ce9d39bfed69addd50dc41d41 339 PRINTS PR00102 Ornithine carbamoyltransferase signature 126 140 3.3E-32 T 15-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 AM378_21630 3b1b832ce9d39bfed69addd50dc41d41 339 PRINTS PR00102 Ornithine carbamoyltransferase signature 232 242 3.3E-32 T 15-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 AM378_21630 3b1b832ce9d39bfed69addd50dc41d41 339 PRINTS PR00102 Ornithine carbamoyltransferase signature 314 325 3.3E-32 T 15-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 AM378_21630 3b1b832ce9d39bfed69addd50dc41d41 339 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 10 150 1.5E-46 T 15-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 AM378_05505 51f5aca1fd3b3337c334cde160fb111c 642 SUPERFAMILY SSF55186 63 241 1.57E-64 T 15-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 AM378_05505 51f5aca1fd3b3337c334cde160fb111c 642 SMART SM00863 170 219 2.6E-19 T 15-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 AM378_05505 51f5aca1fd3b3337c334cde160fb111c 642 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 172 219 3.8E-14 T 15-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 AM378_05505 51f5aca1fd3b3337c334cde160fb111c 642 Pfam PF02824 TGS domain 4 61 6.3E-12 T 15-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 AM378_05505 51f5aca1fd3b3337c334cde160fb111c 642 TIGRFAM TIGR00418 thrS: threonine--tRNA ligase 72 631 4.5E-241 T 15-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 AM378_05505 51f5aca1fd3b3337c334cde160fb111c 642 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 319 529 4.8E-48 T 15-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM378_05505 51f5aca1fd3b3337c334cde160fb111c 642 Gene3D G3DSA:3.30.980.10 69 222 3.9E-62 T 15-10-2018 AM378_05505 51f5aca1fd3b3337c334cde160fb111c 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 362 385 5.9E-54 T 15-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 AM378_05505 51f5aca1fd3b3337c334cde160fb111c 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 464 492 5.9E-54 T 15-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 AM378_05505 51f5aca1fd3b3337c334cde160fb111c 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 507 520 5.9E-54 T 15-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 AM378_05505 51f5aca1fd3b3337c334cde160fb111c 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 329 357 5.9E-54 T 15-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 AM378_05505 51f5aca1fd3b3337c334cde160fb111c 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 534 546 5.9E-54 T 15-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 AM378_05505 51f5aca1fd3b3337c334cde160fb111c 642 Gene3D G3DSA:3.40.50.800 532 642 6.9E-33 T 15-10-2018 IPR036621 Anticodon-binding domain superfamily AM378_05505 51f5aca1fd3b3337c334cde160fb111c 642 Gene3D G3DSA:3.30.54.20 130 187 3.9E-62 T 15-10-2018 AM378_05505 51f5aca1fd3b3337c334cde160fb111c 642 Gene3D G3DSA:3.30.930.10 223 531 2.1E-126 T 15-10-2018 AM378_05505 51f5aca1fd3b3337c334cde160fb111c 642 SUPERFAMILY SSF55681 243 525 3.73E-95 T 15-10-2018 AM378_05505 51f5aca1fd3b3337c334cde160fb111c 642 Hamap MF_00184 Threonine--tRNA ligase [thrS]. 66 634 33.764 T 15-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 AM378_05505 51f5aca1fd3b3337c334cde160fb111c 642 Gene3D G3DSA:3.10.20.30 3 62 2.3E-22 T 15-10-2018 IPR012675 Beta-grasp domain superfamily AM378_05505 51f5aca1fd3b3337c334cde160fb111c 642 Pfam PF03129 Anticodon binding domain 541 630 2.5E-23 T 15-10-2018 IPR004154 Anticodon-binding AM378_05505 51f5aca1fd3b3337c334cde160fb111c 642 SUPERFAMILY SSF52954 529 636 2.27E-33 T 15-10-2018 AM378_05505 51f5aca1fd3b3337c334cde160fb111c 642 SUPERFAMILY SSF81271 3 61 9.81E-17 T 15-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 AM378_17930 bb33fff7462c4368fcb6fd9a0b8a6657 74 Pfam PF04023 FeoA domain 2 64 7.8E-10 T 15-10-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 AM378_17930 bb33fff7462c4368fcb6fd9a0b8a6657 74 SUPERFAMILY SSF50037 2 69 1.8E-15 T 15-10-2018 IPR008988 Transcriptional repressor, C-terminal AM378_17930 bb33fff7462c4368fcb6fd9a0b8a6657 74 SMART SM00899 1 72 1.9E-10 T 15-10-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 AM378_17930 bb33fff7462c4368fcb6fd9a0b8a6657 74 Gene3D G3DSA:2.30.30.90 1 73 8.5E-29 T 15-10-2018 IPR038157 Ferrous iron transporter, core domain AM378_18515 f55719ffef480854ff9f35cd1b10aafb 514 Gene3D G3DSA:3.40.50.1100 25 327 6.5E-131 T 15-10-2018 AM378_18515 f55719ffef480854ff9f35cd1b10aafb 514 Gene3D G3DSA:3.40.1020.10 338 514 1.5E-73 T 15-10-2018 IPR038110 Threonine dehydratase, ACT-like domain superfamily KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 AM378_18515 f55719ffef480854ff9f35cd1b10aafb 514 SUPERFAMILY SSF55021 420 512 1.26E-25 T 15-10-2018 AM378_18515 f55719ffef480854ff9f35cd1b10aafb 514 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 329 419 2.8E-29 T 15-10-2018 IPR001721 Threonine dehydratase, ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 AM378_18515 f55719ffef480854ff9f35cd1b10aafb 514 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 425 512 7.2E-26 T 15-10-2018 IPR001721 Threonine dehydratase, ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 AM378_18515 f55719ffef480854ff9f35cd1b10aafb 514 SUPERFAMILY SSF55021 336 423 2.75E-28 T 15-10-2018 AM378_18515 f55719ffef480854ff9f35cd1b10aafb 514 Gene3D G3DSA:3.40.50.1100 61 157 6.5E-131 T 15-10-2018 AM378_18515 f55719ffef480854ff9f35cd1b10aafb 514 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 29 316 1.5E-78 T 15-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme AM378_18515 f55719ffef480854ff9f35cd1b10aafb 514 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 53 66 - T 15-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 AM378_18515 f55719ffef480854ff9f35cd1b10aafb 514 SUPERFAMILY SSF53686 15 365 2.62E-101 T 15-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme AM378_18515 f55719ffef480854ff9f35cd1b10aafb 514 TIGRFAM TIGR01124 ilvA_2Cterm: threonine ammonia-lyase, biosynthetic 15 512 6.3E-264 T 15-10-2018 IPR005787 Threonine dehydratase, biosynthetic GO:0004794|GO:0009097 KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 AM378_08645 170388fa10dd1a36da7201298f08d45c 293 SMART SM00369 192 214 8.4 T 15-10-2018 IPR003591 Leucine-rich repeat, typical subtype AM378_08645 170388fa10dd1a36da7201298f08d45c 293 SMART SM00369 238 261 0.0096 T 15-10-2018 IPR003591 Leucine-rich repeat, typical subtype AM378_08645 170388fa10dd1a36da7201298f08d45c 293 SMART SM00369 146 169 0.086 T 15-10-2018 IPR003591 Leucine-rich repeat, typical subtype AM378_08645 170388fa10dd1a36da7201298f08d45c 293 SMART SM00369 100 123 1.4 T 15-10-2018 IPR003591 Leucine-rich repeat, typical subtype AM378_08645 170388fa10dd1a36da7201298f08d45c 293 SMART SM00369 55 77 7.6 T 15-10-2018 IPR003591 Leucine-rich repeat, typical subtype AM378_08645 170388fa10dd1a36da7201298f08d45c 293 SMART SM00369 32 54 6.9 T 15-10-2018 IPR003591 Leucine-rich repeat, typical subtype AM378_08645 170388fa10dd1a36da7201298f08d45c 293 SMART SM00369 215 236 1.4 T 15-10-2018 IPR003591 Leucine-rich repeat, typical subtype AM378_08645 170388fa10dd1a36da7201298f08d45c 293 Gene3D G3DSA:3.80.10.10 12 88 4.7E-13 T 15-10-2018 IPR032675 Leucine-rich repeat domain superfamily AM378_08645 170388fa10dd1a36da7201298f08d45c 293 Pfam PF13855 Leucine rich repeat 55 112 6.9E-11 T 15-10-2018 IPR001611 Leucine-rich repeat GO:0005515 AM378_08645 170388fa10dd1a36da7201298f08d45c 293 Pfam PF13855 Leucine rich repeat 171 228 2.2E-10 T 15-10-2018 IPR001611 Leucine-rich repeat GO:0005515 AM378_08645 170388fa10dd1a36da7201298f08d45c 293 SMART SM00364 169 188 60.0 T 15-10-2018 AM378_08645 170388fa10dd1a36da7201298f08d45c 293 SMART SM00364 100 119 80.0 T 15-10-2018 AM378_08645 170388fa10dd1a36da7201298f08d45c 293 SMART SM00364 146 165 40.0 T 15-10-2018 AM378_08645 170388fa10dd1a36da7201298f08d45c 293 SMART SM00364 123 142 8.7 T 15-10-2018 AM378_08645 170388fa10dd1a36da7201298f08d45c 293 SMART SM00364 192 211 57.0 T 15-10-2018 AM378_08645 170388fa10dd1a36da7201298f08d45c 293 SMART SM00364 215 234 1.3 T 15-10-2018 AM378_08645 170388fa10dd1a36da7201298f08d45c 293 SMART SM00364 56 73 270.0 T 15-10-2018 AM378_08645 170388fa10dd1a36da7201298f08d45c 293 SMART SM00364 31 50 260.0 T 15-10-2018 AM378_08645 170388fa10dd1a36da7201298f08d45c 293 SMART SM00364 238 257 30.0 T 15-10-2018 AM378_08645 170388fa10dd1a36da7201298f08d45c 293 Pfam PF13516 Leucine Rich repeat 262 275 0.73 T 15-10-2018 IPR001611 Leucine-rich repeat GO:0005515 AM378_08645 170388fa10dd1a36da7201298f08d45c 293 SUPERFAMILY SSF52058 14 276 4.42E-59 T 15-10-2018 AM378_08645 170388fa10dd1a36da7201298f08d45c 293 Gene3D G3DSA:3.80.10.10 89 180 2.3E-28 T 15-10-2018 IPR032675 Leucine-rich repeat domain superfamily AM378_08645 170388fa10dd1a36da7201298f08d45c 293 Gene3D G3DSA:3.80.10.10 181 286 7.0E-30 T 15-10-2018 IPR032675 Leucine-rich repeat domain superfamily AM378_08020 88c308237a1e3530e93e6ea56d596df2 253 SMART SM00014 76 227 1.2E-31 T 15-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AM378_08020 88c308237a1e3530e93e6ea56d596df2 253 Gene3D G3DSA:1.20.144.10 2 253 7.9E-82 T 15-10-2018 AM378_08020 88c308237a1e3530e93e6ea56d596df2 253 Pfam PF01569 PAP2 superfamily 80 232 8.2E-30 T 15-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AM378_08020 88c308237a1e3530e93e6ea56d596df2 253 SUPERFAMILY SSF48317 17 234 8.63E-32 T 15-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily AM378_05840 90d52fe19b50c38732a4a025a06e1b2f 213 Gene3D G3DSA:3.40.50.720 2 212 1.6E-54 T 15-10-2018 AM378_05840 90d52fe19b50c38732a4a025a06e1b2f 213 Pfam PF13460 NAD(P)H-binding 7 202 7.8E-37 T 15-10-2018 IPR016040 NAD(P)-binding domain AM378_05840 90d52fe19b50c38732a4a025a06e1b2f 213 SUPERFAMILY SSF51735 1 209 2.77E-39 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily AM378_09535 eabb439b534fdc2d5fc46df26a2c47fd 169 TIGRFAM TIGR03823 FliZ: flagellar regulatory protein FliZ 1 167 4.0E-92 T 15-10-2018 IPR022523 Flagellar regulator, FliZ AM378_09535 eabb439b534fdc2d5fc46df26a2c47fd 169 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 91 166 7.4E-7 T 15-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 AM378_17105 08b9a24acb100d8e1957a2273adcbea0 202 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 122 133 6.8E-13 T 15-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 AM378_17105 08b9a24acb100d8e1957a2273adcbea0 202 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 111 121 6.8E-13 T 15-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 AM378_17105 08b9a24acb100d8e1957a2273adcbea0 202 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 150 162 6.8E-13 T 15-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 AM378_17105 08b9a24acb100d8e1957a2273adcbea0 202 SUPERFAMILY SSF46785 3 69 8.68E-20 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM378_17105 08b9a24acb100d8e1957a2273adcbea0 202 Pfam PF00717 Peptidase S24-like 114 179 2.5E-16 T 15-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C AM378_17105 08b9a24acb100d8e1957a2273adcbea0 202 Pfam PF01726 LexA DNA binding domain 1 65 1.5E-29 T 15-10-2018 IPR006199 LexA repressor, DNA-binding domain GO:0004252|GO:0006508 AM378_17105 08b9a24acb100d8e1957a2273adcbea0 202 SUPERFAMILY SSF51306 76 198 6.28E-39 T 15-10-2018 IPR036286 LexA/Signal peptidase-like superfamily AM378_17105 08b9a24acb100d8e1957a2273adcbea0 202 TIGRFAM TIGR00498 lexA: repressor LexA 1 199 1.3E-83 T 15-10-2018 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 AM378_17105 08b9a24acb100d8e1957a2273adcbea0 202 Gene3D G3DSA:2.10.109.10 80 202 9.9E-47 T 15-10-2018 AM378_17105 08b9a24acb100d8e1957a2273adcbea0 202 Gene3D G3DSA:1.10.10.10 1 70 6.6E-30 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_17105 08b9a24acb100d8e1957a2273adcbea0 202 Hamap MF_00015 LexA repressor [lexA]. 3 199 32.463 T 15-10-2018 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 AM378_07665 16c84f112a6ee1c165f4d0f6e828d325 1177 SUPERFAMILY SSF52518 2 254 4.12E-71 T 15-10-2018 IPR029061 Thiamin diphosphate-binding fold AM378_07665 16c84f112a6ee1c165f4d0f6e828d325 1177 Pfam PF10371 Domain of unknown function 627 678 1.5E-23 T 15-10-2018 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain GO:0016903|GO:0055114 AM378_07665 16c84f112a6ee1c165f4d0f6e828d325 1177 Gene3D G3DSA:3.40.50.970 1 254 1.5E-102 T 15-10-2018 AM378_07665 16c84f112a6ee1c165f4d0f6e828d325 1177 PIRSF PIRSF000159 1 1177 0.0 T 15-10-2018 IPR011895 Pyruvate-flavodoxin oxidoreductase GO:0005506|GO:0016903|GO:0022900|GO:0055114 AM378_07665 16c84f112a6ee1c165f4d0f6e828d325 1177 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 949 1069 5.5E-9 T 15-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 AM378_07665 16c84f112a6ee1c165f4d0f6e828d325 1177 Gene3D G3DSA:3.40.50.920 255 414 1.6E-55 T 15-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 AM378_07665 16c84f112a6ee1c165f4d0f6e828d325 1177 SMART SM00890 622 679 1.7E-30 T 15-10-2018 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain GO:0016903|GO:0055114 AM378_07665 16c84f112a6ee1c165f4d0f6e828d325 1177 SUPERFAMILY SSF53323 419 668 5.75E-74 T 15-10-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 AM378_07665 16c84f112a6ee1c165f4d0f6e828d325 1177 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 426 607 4.1E-32 T 15-10-2018 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 AM378_07665 16c84f112a6ee1c165f4d0f6e828d325 1177 SUPERFAMILY SSF54862 665 837 5.02E-22 T 15-10-2018 AM378_07665 16c84f112a6ee1c165f4d0f6e828d325 1177 TIGRFAM TIGR02176 pyruv_ox_red: pyruvate:ferredoxin (flavodoxin) oxidoreductase 1 1168 0.0 T 15-10-2018 IPR011895 Pyruvate-flavodoxin oxidoreductase GO:0005506|GO:0016903|GO:0022900|GO:0055114 AM378_07665 16c84f112a6ee1c165f4d0f6e828d325 1177 Gene3D G3DSA:3.30.70.20 669 791 2.4E-38 T 15-10-2018 AM378_07665 16c84f112a6ee1c165f4d0f6e828d325 1177 Gene3D G3DSA:3.40.920.10 417 622 1.4E-73 T 15-10-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 AM378_07665 16c84f112a6ee1c165f4d0f6e828d325 1177 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 745 756 - T 15-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AM378_07665 16c84f112a6ee1c165f4d0f6e828d325 1177 SUPERFAMILY SSF52922 256 412 2.86E-42 T 15-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 AM378_07665 16c84f112a6ee1c165f4d0f6e828d325 1177 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 689 700 - T 15-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AM378_07665 16c84f112a6ee1c165f4d0f6e828d325 1177 Pfam PF12838 4Fe-4S dicluster domain 689 757 1.0E-9 T 15-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AM378_07665 16c84f112a6ee1c165f4d0f6e828d325 1177 Pfam PF17147 Pyruvate:ferredoxin oxidoreductase core domain II 265 347 2.3E-15 T 15-10-2018 IPR033412 Pyruvate:ferredoxin oxidoreductase, core domain II AM378_07665 16c84f112a6ee1c165f4d0f6e828d325 1177 Gene3D G3DSA:4.10.780.10 633 668 4.1E-7 T 15-10-2018 IPR037112 Pyruvate-flavodoxin oxidoreductase, EKR domain superfamily AM378_07665 16c84f112a6ee1c165f4d0f6e828d325 1177 Pfam PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg 13 242 5.1E-79 T 15-10-2018 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0055114 AM378_07665 16c84f112a6ee1c165f4d0f6e828d325 1177 SUPERFAMILY SSF52518 794 1164 4.65E-119 T 15-10-2018 IPR029061 Thiamin diphosphate-binding fold AM378_07665 16c84f112a6ee1c165f4d0f6e828d325 1177 Gene3D G3DSA:3.40.50.970 794 1171 2.7E-148 T 15-10-2018 AM378_18240 aa6b0ab9b97663a22acb0ad4d8cb22bd 1357 SUPERFAMILY SSF53474 1077 1356 1.45E-49 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold AM378_18240 aa6b0ab9b97663a22acb0ad4d8cb22bd 1357 Gene3D G3DSA:3.30.559.30 231 476 3.2E-108 T 15-10-2018 AM378_18240 aa6b0ab9b97663a22acb0ad4d8cb22bd 1357 SUPERFAMILY SSF52777 50 227 2.59E-35 T 15-10-2018 AM378_18240 aa6b0ab9b97663a22acb0ad4d8cb22bd 1357 SUPERFAMILY SSF56801 469 1022 1.15E-132 T 15-10-2018 AM378_18240 aa6b0ab9b97663a22acb0ad4d8cb22bd 1357 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 531 929 5.9E-113 T 15-10-2018 IPR010071 Amino acid adenylation domain AM378_18240 aa6b0ab9b97663a22acb0ad4d8cb22bd 1357 Pfam PF00550 Phosphopantetheine attachment site 1013 1076 1.7E-14 T 15-10-2018 IPR009081 Phosphopantetheine binding ACP domain AM378_18240 aa6b0ab9b97663a22acb0ad4d8cb22bd 1357 Gene3D G3DSA:3.30.300.30 900 999 2.7E-28 T 15-10-2018 AM378_18240 aa6b0ab9b97663a22acb0ad4d8cb22bd 1357 Pfam PF00668 Condensation domain 44 490 3.0E-91 T 15-10-2018 IPR001242 Condensation domain AM378_18240 aa6b0ab9b97663a22acb0ad4d8cb22bd 1357 Gene3D G3DSA:1.10.1200.10 1000 1083 1.8E-20 T 15-10-2018 IPR036736 ACP-like superfamily AM378_18240 aa6b0ab9b97663a22acb0ad4d8cb22bd 1357 SUPERFAMILY SSF52777 233 479 9.34E-53 T 15-10-2018 AM378_18240 aa6b0ab9b97663a22acb0ad4d8cb22bd 1357 Gene3D G3DSA:3.40.50.12780 498 899 2.3E-111 T 15-10-2018 AM378_18240 aa6b0ab9b97663a22acb0ad4d8cb22bd 1357 Gene3D G3DSA:3.30.559.10 48 420 3.2E-108 T 15-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 AM378_18240 aa6b0ab9b97663a22acb0ad4d8cb22bd 1357 SMART SM00823 Phosphopantetheine attachment site 1011 1080 1.4E-4 T 15-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 AM378_18240 aa6b0ab9b97663a22acb0ad4d8cb22bd 1357 Pfam PF00975 Thioesterase domain 1100 1350 4.8E-28 T 15-10-2018 IPR001031 Thioesterase GO:0009058|GO:0016788 Reactome: R-HSA-75105 AM378_18240 aa6b0ab9b97663a22acb0ad4d8cb22bd 1357 Pfam PF00501 AMP-binding enzyme 509 905 1.5E-79 T 15-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 AM378_18240 aa6b0ab9b97663a22acb0ad4d8cb22bd 1357 Pfam PF13193 AMP-binding enzyme C-terminal domain 913 986 2.3E-7 T 15-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain AM378_18240 aa6b0ab9b97663a22acb0ad4d8cb22bd 1357 SUPERFAMILY SSF47336 1004 1076 1.7E-16 T 15-10-2018 IPR036736 ACP-like superfamily AM378_18240 aa6b0ab9b97663a22acb0ad4d8cb22bd 1357 Gene3D G3DSA:3.40.50.1820 1087 1357 1.9E-50 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold AM378_18240 aa6b0ab9b97663a22acb0ad4d8cb22bd 1357 ProSitePatterns PS00455 Putative AMP-binding domain signature. 646 657 - T 15-10-2018 IPR020845 AMP-binding, conserved site AM378_10875 7b4f6b37c1008f5a975e20eb1ed9caab 296 SUPERFAMILY SSF46785 6 115 5.53E-19 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM378_10875 7b4f6b37c1008f5a975e20eb1ed9caab 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 68 1.5E-16 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_10875 7b4f6b37c1008f5a975e20eb1ed9caab 296 Pfam PF03466 LysR substrate binding domain 96 293 5.6E-33 T 15-10-2018 IPR005119 LysR, substrate-binding AM378_10875 7b4f6b37c1008f5a975e20eb1ed9caab 296 SUPERFAMILY SSF53850 96 294 1.28E-35 T 15-10-2018 AM378_10875 7b4f6b37c1008f5a975e20eb1ed9caab 296 Gene3D G3DSA:1.10.10.10 9 95 2.1E-20 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_10875 7b4f6b37c1008f5a975e20eb1ed9caab 296 Gene3D G3DSA:3.40.190.10 104 289 9.3E-51 T 15-10-2018 AM378_10875 7b4f6b37c1008f5a975e20eb1ed9caab 296 Gene3D G3DSA:3.40.190.10 164 263 9.3E-51 T 15-10-2018 AM378_02605 ffbc706668c5387197f6b96cb58fa545 221 Hamap MF_00223 GTP cyclohydrolase 1 [folE]. 34 217 34.161 T 15-10-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 AM378_02605 ffbc706668c5387197f6b96cb58fa545 221 SUPERFAMILY SSF55620 8 219 2.52E-74 T 15-10-2018 AM378_02605 ffbc706668c5387197f6b96cb58fa545 221 Pfam PF01227 GTP cyclohydrolase I 38 216 1.3E-63 T 15-10-2018 IPR020602 GTP cyclohydrolase I domain KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 AM378_02605 ffbc706668c5387197f6b96cb58fa545 221 Gene3D G3DSA:3.30.1130.10 85 220 5.1E-54 T 15-10-2018 AM378_02605 ffbc706668c5387197f6b96cb58fa545 221 TIGRFAM TIGR00063 folE: GTP cyclohydrolase I 38 218 1.3E-85 T 15-10-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 AM378_02605 ffbc706668c5387197f6b96cb58fa545 221 ProSitePatterns PS00860 GTP cyclohydrolase I signature 2. 144 154 - T 15-10-2018 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 AM378_02605 ffbc706668c5387197f6b96cb58fa545 221 Gene3D G3DSA:1.10.286.10 1 84 9.4E-37 T 15-10-2018 AM378_02605 ffbc706668c5387197f6b96cb58fa545 221 ProSitePatterns PS00859 GTP cyclohydrolase I signature 1. 96 112 - T 15-10-2018 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 AM378_16495 87575d03d2f41c4ad1556d2df4af5b1c 191 Pfam PF04972 BON domain 46 113 1.7E-12 T 15-10-2018 IPR007055 BON domain AM378_16495 87575d03d2f41c4ad1556d2df4af5b1c 191 Pfam PF04972 BON domain 124 190 2.3E-17 T 15-10-2018 IPR007055 BON domain AM378_16495 87575d03d2f41c4ad1556d2df4af5b1c 191 SMART SM00749 129 191 5.4E-4 T 15-10-2018 IPR014004 Transport-associated and nodulation domain, bacteria AM378_16495 87575d03d2f41c4ad1556d2df4af5b1c 191 SMART SM00749 51 114 3.4E-12 T 15-10-2018 IPR014004 Transport-associated and nodulation domain, bacteria AM378_02345 15411a8a352d8c3d9ec3d60b232e5ecd 209 SMART SM00421 144 201 3.8E-5 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM378_02345 15411a8a352d8c3d9ec3d60b232e5ecd 209 SUPERFAMILY SSF46894 135 192 1.09E-11 T 15-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AM378_02345 15411a8a352d8c3d9ec3d60b232e5ecd 209 Pfam PF00196 Bacterial regulatory proteins, luxR family 146 191 3.6E-10 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM378_02345 15411a8a352d8c3d9ec3d60b232e5ecd 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 177 189 6.0E-6 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM378_02345 15411a8a352d8c3d9ec3d60b232e5ecd 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 147 161 6.0E-6 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM378_02345 15411a8a352d8c3d9ec3d60b232e5ecd 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 161 177 6.0E-6 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM378_02345 15411a8a352d8c3d9ec3d60b232e5ecd 209 Gene3D G3DSA:3.40.50.12740 10 201 1.0E-12 T 15-10-2018 AM378_13440 efd7be0ebb1d2e627535df637c73583b 396 Pfam PF00042 Globin 7 102 1.1E-13 T 15-10-2018 IPR000971 Globin GO:0020037 AM378_13440 efd7be0ebb1d2e627535df637c73583b 396 Gene3D G3DSA:1.10.490.10 1 142 3.1E-50 T 15-10-2018 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 AM378_13440 efd7be0ebb1d2e627535df637c73583b 396 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 183 193 9.3E-5 T 15-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AM378_13440 efd7be0ebb1d2e627535df637c73583b 396 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 204 211 9.3E-5 T 15-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AM378_13440 efd7be0ebb1d2e627535df637c73583b 396 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 358 366 9.3E-5 T 15-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AM378_13440 efd7be0ebb1d2e627535df637c73583b 396 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 263 282 9.3E-5 T 15-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AM378_13440 efd7be0ebb1d2e627535df637c73583b 396 Gene3D G3DSA:2.40.30.10 149 254 9.5E-33 T 15-10-2018 AM378_13440 efd7be0ebb1d2e627535df637c73583b 396 Pfam PF00175 Oxidoreductase NAD-binding domain 264 371 2.7E-15 T 15-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 AM378_13440 efd7be0ebb1d2e627535df637c73583b 396 Pfam PF00970 Oxidoreductase FAD-binding domain 169 252 3.6E-9 T 15-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 AM378_13440 efd7be0ebb1d2e627535df637c73583b 396 SUPERFAMILY SSF52343 255 394 3.01E-38 T 15-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AM378_13440 efd7be0ebb1d2e627535df637c73583b 396 Gene3D G3DSA:3.40.50.80 256 396 1.6E-34 T 15-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AM378_13440 efd7be0ebb1d2e627535df637c73583b 396 PRINTS PR00410 Phenol hydroxylase reductase family signature 247 256 5.8E-5 T 15-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AM378_13440 efd7be0ebb1d2e627535df637c73583b 396 PRINTS PR00410 Phenol hydroxylase reductase family signature 183 195 5.8E-5 T 15-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AM378_13440 efd7be0ebb1d2e627535df637c73583b 396 PRINTS PR00410 Phenol hydroxylase reductase family signature 358 366 5.8E-5 T 15-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AM378_13440 efd7be0ebb1d2e627535df637c73583b 396 PRINTS PR00410 Phenol hydroxylase reductase family signature 263 282 5.8E-5 T 15-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AM378_13440 efd7be0ebb1d2e627535df637c73583b 396 SUPERFAMILY SSF46458 1 142 4.82E-38 T 15-10-2018 IPR009050 Globin-like superfamily AM378_13440 efd7be0ebb1d2e627535df637c73583b 396 Hamap MF_01252 Flavohemoprotein [hmp]. 1 396 57.667 T 15-10-2018 IPR023950 Flavohemoprotein GO:0008941|GO:0019825|GO:0020037|GO:0051409|GO:0055114|GO:0071949 AM378_13440 efd7be0ebb1d2e627535df637c73583b 396 SUPERFAMILY SSF63380 148 253 1.19E-28 T 15-10-2018 IPR017938 Riboflavin synthase-like beta-barrel AM378_20135 621abe34e175b03055c1ef8ca82cfe8f 303 Gene3D G3DSA:1.10.150.130 9 103 5.2E-17 T 15-10-2018 IPR010998 Integrase/recombinase, N-terminal AM378_20135 621abe34e175b03055c1ef8ca82cfe8f 303 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 10 298 55.795 T 15-10-2018 IPR023009 Tyrosine recombinase XerC/XerD AM378_20135 621abe34e175b03055c1ef8ca82cfe8f 303 Pfam PF00589 Phage integrase family 117 284 2.5E-51 T 15-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AM378_20135 621abe34e175b03055c1ef8ca82cfe8f 303 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 12 95 2.3E-20 T 15-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 AM378_20135 621abe34e175b03055c1ef8ca82cfe8f 303 SUPERFAMILY SSF47823 11 103 1.65E-8 T 15-10-2018 AM378_20135 621abe34e175b03055c1ef8ca82cfe8f 303 Gene3D G3DSA:1.10.443.10 116 292 1.6E-58 T 15-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 AM378_20135 621abe34e175b03055c1ef8ca82cfe8f 303 SUPERFAMILY SSF56349 113 296 1.03E-53 T 15-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AM378_20135 621abe34e175b03055c1ef8ca82cfe8f 303 TIGRFAM TIGR02224 recomb_XerC: tyrosine recombinase XerC 14 300 4.1E-107 T 15-10-2018 IPR011931 Tyrosine recombinase XerC GO:0003677|GO:0006310|GO:0007059|GO:0015074|GO:0051301 AM378_07225 693043266ea8e9b6fb15f3fdeedd1562 480 SUPERFAMILY SSF55073 315 468 2.35E-38 T 15-10-2018 IPR029787 Nucleotide cyclase AM378_07225 693043266ea8e9b6fb15f3fdeedd1562 480 SMART SM00267 299 470 4.5E-49 T 15-10-2018 IPR000160 GGDEF domain AM378_07225 693043266ea8e9b6fb15f3fdeedd1562 480 Gene3D G3DSA:3.30.70.270 300 470 1.5E-47 T 15-10-2018 AM378_07225 693043266ea8e9b6fb15f3fdeedd1562 480 Pfam PF00990 Diguanylate cyclase, GGDEF domain 310 466 1.6E-37 T 15-10-2018 IPR000160 GGDEF domain AM378_07225 693043266ea8e9b6fb15f3fdeedd1562 480 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 306 469 1.6E-42 T 15-10-2018 IPR000160 GGDEF domain AM378_21605 ce2e0333e9679b0b8e0a283e6eb9f2be 995 SMART SM00823 Phosphopantetheine attachment site 508 577 0.0072 T 15-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 AM378_21605 ce2e0333e9679b0b8e0a283e6eb9f2be 995 Pfam PF00501 AMP-binding enzyme 11 399 5.7E-92 T 15-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 AM378_21605 ce2e0333e9679b0b8e0a283e6eb9f2be 995 ProSitePatterns PS00455 Putative AMP-binding domain signature. 149 160 - T 15-10-2018 IPR020845 AMP-binding, conserved site AM378_21605 ce2e0333e9679b0b8e0a283e6eb9f2be 995 Gene3D G3DSA:3.30.300.30 393 497 1.5E-23 T 15-10-2018 AM378_21605 ce2e0333e9679b0b8e0a283e6eb9f2be 995 Pfam PF07993 Male sterility protein 623 866 4.2E-50 T 15-10-2018 IPR013120 Male sterility, NAD-binding Reactome: R-HSA-8848584 AM378_21605 ce2e0333e9679b0b8e0a283e6eb9f2be 995 Gene3D G3DSA:3.40.50.720 596 990 6.9E-81 T 15-10-2018 AM378_21605 ce2e0333e9679b0b8e0a283e6eb9f2be 995 TIGRFAM TIGR01746 Thioester-redct: thioester reductase domain 621 984 7.8E-101 T 15-10-2018 IPR010080 Thioester reductase-like domain AM378_21605 ce2e0333e9679b0b8e0a283e6eb9f2be 995 Pfam PF00550 Phosphopantetheine attachment site 511 572 3.0E-13 T 15-10-2018 IPR009081 Phosphopantetheine binding ACP domain AM378_21605 ce2e0333e9679b0b8e0a283e6eb9f2be 995 Gene3D G3DSA:3.40.50.12780 1 392 3.8E-119 T 15-10-2018 AM378_21605 ce2e0333e9679b0b8e0a283e6eb9f2be 995 SUPERFAMILY SSF56801 4 521 3.92E-130 T 15-10-2018 AM378_21605 ce2e0333e9679b0b8e0a283e6eb9f2be 995 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 30 422 1.3E-115 T 15-10-2018 IPR010071 Amino acid adenylation domain AM378_21605 ce2e0333e9679b0b8e0a283e6eb9f2be 995 SUPERFAMILY SSF47336 501 573 2.09E-15 T 15-10-2018 IPR036736 ACP-like superfamily AM378_21605 ce2e0333e9679b0b8e0a283e6eb9f2be 995 SUPERFAMILY SSF51735 618 963 9.54E-33 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily AM378_21605 ce2e0333e9679b0b8e0a283e6eb9f2be 995 ProSitePatterns PS00012 Phosphopantetheine attachment site. 532 547 - T 15-10-2018 IPR006162 Phosphopantetheine attachment site AM378_21605 ce2e0333e9679b0b8e0a283e6eb9f2be 995 Gene3D G3DSA:1.10.1200.10 498 581 1.8E-20 T 15-10-2018 IPR036736 ACP-like superfamily AM378_15415 9dfe3169720e01baa2837df911d1db35 220 Pfam PF00072 Response regulator receiver domain 3 112 1.4E-23 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM378_15415 9dfe3169720e01baa2837df911d1db35 220 SMART SM00448 1 112 3.2E-37 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM378_15415 9dfe3169720e01baa2837df911d1db35 220 SMART SM00862 145 216 5.3E-23 T 15-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AM378_15415 9dfe3169720e01baa2837df911d1db35 220 Gene3D G3DSA:1.10.10.10 123 219 1.3E-27 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_15415 9dfe3169720e01baa2837df911d1db35 220 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 216 2.1E-20 T 15-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AM378_15415 9dfe3169720e01baa2837df911d1db35 220 Gene3D G3DSA:3.40.50.2300 1 121 2.8E-38 T 15-10-2018 AM378_15415 9dfe3169720e01baa2837df911d1db35 220 SUPERFAMILY SSF52172 1 172 1.04E-36 T 15-10-2018 IPR011006 CheY-like superfamily AM378_10265 d5be39d86c200608ae80419706414368 350 Gene3D G3DSA:3.40.50.720 1 350 9.7E-113 T 15-10-2018 AM378_10265 d5be39d86c200608ae80419706414368 350 SUPERFAMILY SSF51735 7 347 5.8E-31 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily AM378_10265 d5be39d86c200608ae80419706414368 350 Pfam PF01370 NAD dependent epimerase/dehydratase family 7 103 1.5E-8 T 15-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 AM378_14210 8657fc18fb52d98c908b585794d95b0f 712 Gene3D G3DSA:3.90.1150.10 425 594 2.2E-70 T 15-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AM378_14210 8657fc18fb52d98c908b585794d95b0f 712 Pfam PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain 570 700 3.1E-46 T 15-10-2018 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 AM378_14210 8657fc18fb52d98c908b585794d95b0f 712 ProSitePatterns PS00703 Orn/Lys/Arg decarboxylases family 1 pyridoxal-P attachment site. 362 376 - T 15-10-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 AM378_14210 8657fc18fb52d98c908b585794d95b0f 712 Gene3D G3DSA:3.40.640.10 130 424 6.3E-93 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AM378_14210 8657fc18fb52d98c908b585794d95b0f 712 Gene3D G3DSA:3.90.100.10 595 712 6.6E-48 T 15-10-2018 AM378_14210 8657fc18fb52d98c908b585794d95b0f 712 PIRSF PIRSF009393 1 712 4.8E-284 T 15-10-2018 IPR011193 Ornithine/lysine/arginine decarboxylase GO:0005737|GO:0006520|GO:0016831 AM378_14210 8657fc18fb52d98c908b585794d95b0f 712 Gene3D G3DSA:3.40.50.2300 1 129 3.8E-56 T 15-10-2018 AM378_14210 8657fc18fb52d98c908b585794d95b0f 712 SUPERFAMILY SSF55904 567 708 1.27E-44 T 15-10-2018 IPR036633 Orn/Lys/Arg decarboxylase, C-terminal domain superfamily GO:0003824 AM378_14210 8657fc18fb52d98c908b585794d95b0f 712 Pfam PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain 14 124 3.5E-27 T 15-10-2018 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal GO:0016831 AM378_14210 8657fc18fb52d98c908b585794d95b0f 712 SUPERFAMILY SSF53383 130 562 1.6E-105 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM378_14210 8657fc18fb52d98c908b585794d95b0f 712 Pfam PF01276 Orn/Lys/Arg decarboxylase, major domain 130 545 1.2E-196 T 15-10-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 AM378_07250 6cc6f3162125cf7f893117215099b45a 500 Pfam PF00171 Aldehyde dehydrogenase family 33 491 1.3E-167 T 15-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 AM378_07250 6cc6f3162125cf7f893117215099b45a 500 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 267 274 - T 15-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 AM378_07250 6cc6f3162125cf7f893117215099b45a 500 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 296 307 - T 15-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 AM378_07250 6cc6f3162125cf7f893117215099b45a 500 SUPERFAMILY SSF53720 14 495 2.75E-162 T 15-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 AM378_07250 6cc6f3162125cf7f893117215099b45a 500 Gene3D G3DSA:3.40.309.10 271 459 4.3E-173 T 15-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 AM378_07250 6cc6f3162125cf7f893117215099b45a 500 Gene3D G3DSA:3.40.605.10 34 490 4.3E-173 T 15-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 AM378_01575 921cff83839ef4b66ca5716f08be0935 318 Pfam PF01497 Periplasmic binding protein 50 287 5.9E-21 T 15-10-2018 IPR002491 ABC transporter periplasmic binding domain AM378_01575 921cff83839ef4b66ca5716f08be0935 318 Gene3D G3DSA:3.40.50.1980 18 140 1.4E-26 T 15-10-2018 AM378_01575 921cff83839ef4b66ca5716f08be0935 318 Gene3D G3DSA:3.40.50.1980 141 316 3.0E-51 T 15-10-2018 AM378_01575 921cff83839ef4b66ca5716f08be0935 318 SUPERFAMILY SSF53807 39 313 1.45E-45 T 15-10-2018 AM378_18080 f84609447aa391e7fb40240b86641ba4 438 Pfam PF02447 GntP family permease 1 436 2.2E-181 T 15-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 AM378_18080 f84609447aa391e7fb40240b86641ba4 438 TIGRFAM TIGR00791 gntP: transporter, gluconate:H+ symporter (GntP) family 1 438 1.4E-196 T 15-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 AM378_18080 f84609447aa391e7fb40240b86641ba4 438 PIRSF PIRSF002746 1 438 1.3E-159 T 15-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 AM378_10615 6f851a3b7898480a59cae0a9a9220166 789 SUPERFAMILY SSF50998 164 777 1.31E-151 T 15-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily AM378_10615 6f851a3b7898480a59cae0a9a9220166 789 Pfam PF13360 PQQ-like domain 216 376 1.0E-8 T 15-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat AM378_10615 6f851a3b7898480a59cae0a9a9220166 789 Pfam PF13360 PQQ-like domain 664 752 4.1E-5 T 15-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat AM378_10615 6f851a3b7898480a59cae0a9a9220166 789 Gene3D G3DSA:2.140.10.10 159 543 3.4E-121 T 15-10-2018 AM378_10615 6f851a3b7898480a59cae0a9a9220166 789 Pfam PF01011 PQQ enzyme repeat 442 467 6.2E-7 T 15-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat AM378_10615 6f851a3b7898480a59cae0a9a9220166 789 Gene3D G3DSA:2.140.10.10 561 788 1.3E-36 T 15-10-2018 AM378_10615 6f851a3b7898480a59cae0a9a9220166 789 TIGRFAM TIGR03074 PQQ_membr_DH: membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family 18 787 0.0 T 15-10-2018 IPR017511 PQQ-dependent membrane bound dehydrogenase GO:0016021|GO:0016614|GO:0048038|GO:0055114 AM378_10615 6f851a3b7898480a59cae0a9a9220166 789 SMART SM00564 219 250 1.7E-4 T 15-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AM378_10615 6f851a3b7898480a59cae0a9a9220166 789 SMART SM00564 282 313 130.0 T 15-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AM378_10615 6f851a3b7898480a59cae0a9a9220166 789 SMART SM00564 634 681 290.0 T 15-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AM378_10615 6f851a3b7898480a59cae0a9a9220166 789 SMART SM00564 408 457 40.0 T 15-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AM378_10615 6f851a3b7898480a59cae0a9a9220166 789 SMART SM00564 338 379 7.3 T 15-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AM378_10615 6f851a3b7898480a59cae0a9a9220166 789 SMART SM00564 709 742 0.0029 T 15-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AM378_10615 6f851a3b7898480a59cae0a9a9220166 789 ProSitePatterns PS00364 Bacterial quinoprotein dehydrogenases signature 2. 403 424 - T 15-10-2018 IPR001479 Quinoprotein dehydrogenase, conserved site GO:0030288|GO:0055114 AM378_15750 d964a470c77874f45ecfa161334a9dac 229 SMART SM00421 151 208 3.1E-4 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM378_15750 d964a470c77874f45ecfa161334a9dac 229 Pfam PF00196 Bacterial regulatory proteins, luxR family 154 203 2.2E-9 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM378_15750 d964a470c77874f45ecfa161334a9dac 229 SUPERFAMILY SSF46894 145 209 3.4E-13 T 15-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AM378_15750 d964a470c77874f45ecfa161334a9dac 229 Gene3D G3DSA:1.10.10.10 130 214 4.3E-11 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_15750 d964a470c77874f45ecfa161334a9dac 229 Pfam PF08448 PAS fold 20 123 5.9E-5 T 15-10-2018 IPR013656 PAS fold-4 AM378_21725 31286ab7c0b1e45e165a330049465e71 321 SUPERFAMILY SSF51735 2 313 1.2E-47 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily AM378_21725 31286ab7c0b1e45e165a330049465e71 321 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 203 4.3E-21 T 15-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 AM378_21725 31286ab7c0b1e45e165a330049465e71 321 Gene3D G3DSA:3.40.50.720 8 299 1.3E-119 T 15-10-2018 AM378_21725 31286ab7c0b1e45e165a330049465e71 321 Gene3D G3DSA:3.90.25.10 172 309 1.3E-119 T 15-10-2018 AM378_15410 d14ca12355e7e0406f3de7fae4478438 452 Gene3D G3DSA:1.20.5.1040 132 188 4.7E-14 T 15-10-2018 AM378_15410 d14ca12355e7e0406f3de7fae4478438 452 Gene3D G3DSA:1.20.5.1040 1 57 2.4E-13 T 15-10-2018 AM378_15410 d14ca12355e7e0406f3de7fae4478438 452 Pfam PF00512 His Kinase A (phospho-acceptor) domain 241 304 6.2E-11 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM378_15410 d14ca12355e7e0406f3de7fae4478438 452 SMART SM00388 239 305 7.3E-13 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM378_15410 d14ca12355e7e0406f3de7fae4478438 452 SUPERFAMILY SSF47384 222 304 1.88E-14 T 15-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AM378_15410 d14ca12355e7e0406f3de7fae4478438 452 Gene3D G3DSA:3.30.565.10 310 452 2.5E-27 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AM378_15410 d14ca12355e7e0406f3de7fae4478438 452 SUPERFAMILY SSF55874 294 452 4.32E-32 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AM378_15410 d14ca12355e7e0406f3de7fae4478438 452 Pfam PF08521 Two-component sensor kinase N-terminal 19 159 5.7E-6 T 15-10-2018 IPR013727 Two-component sensor kinase, N-terminal AM378_15410 d14ca12355e7e0406f3de7fae4478438 452 PRINTS PR00344 Bacterial sensor protein C-terminal signature 384 398 3.0E-5 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM378_15410 d14ca12355e7e0406f3de7fae4478438 452 PRINTS PR00344 Bacterial sensor protein C-terminal signature 416 434 3.0E-5 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM378_15410 d14ca12355e7e0406f3de7fae4478438 452 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 356 451 2.5E-17 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AM378_15410 d14ca12355e7e0406f3de7fae4478438 452 Gene3D G3DSA:1.10.287.130 189 305 1.3E-19 T 15-10-2018 AM378_15410 d14ca12355e7e0406f3de7fae4478438 452 SMART SM00387 351 452 7.4E-23 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AM378_07125 debad01073e9229d0db63fa1e4fd36a4 1045 SUPERFAMILY SSF82714 721 811 3.79E-18 T 15-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AM378_07125 debad01073e9229d0db63fa1e4fd36a4 1045 Gene3D G3DSA:3.30.2090.10 722 814 0.0 T 15-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AM378_07125 debad01073e9229d0db63fa1e4fd36a4 1045 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 1 1039 0.0 T 15-10-2018 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0006855|GO:0015562|GO:0016021 AM378_07125 debad01073e9229d0db63fa1e4fd36a4 1045 Pfam PF00873 AcrB/AcrD/AcrF family 1 1029 0.0 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AM378_07125 debad01073e9229d0db63fa1e4fd36a4 1045 SUPERFAMILY SSF82866 843 1029 1.7E-39 T 15-10-2018 AM378_07125 debad01073e9229d0db63fa1e4fd36a4 1045 Gene3D G3DSA:3.30.70.1430 38 822 0.0 T 15-10-2018 AM378_07125 debad01073e9229d0db63fa1e4fd36a4 1045 Gene3D G3DSA:3.30.70.1430 568 672 0.0 T 15-10-2018 AM378_07125 debad01073e9229d0db63fa1e4fd36a4 1045 PRINTS PR00702 Acriflavin resistance protein family signature 363 384 2.5E-107 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AM378_07125 debad01073e9229d0db63fa1e4fd36a4 1045 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 2.5E-107 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AM378_07125 debad01073e9229d0db63fa1e4fd36a4 1045 PRINTS PR00702 Acriflavin resistance protein family signature 470 493 2.5E-107 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AM378_07125 debad01073e9229d0db63fa1e4fd36a4 1045 PRINTS PR00702 Acriflavin resistance protein family signature 620 634 2.5E-107 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AM378_07125 debad01073e9229d0db63fa1e4fd36a4 1045 PRINTS PR00702 Acriflavin resistance protein family signature 336 359 2.5E-107 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AM378_07125 debad01073e9229d0db63fa1e4fd36a4 1045 PRINTS PR00702 Acriflavin resistance protein family signature 445 468 2.5E-107 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AM378_07125 debad01073e9229d0db63fa1e4fd36a4 1045 PRINTS PR00702 Acriflavin resistance protein family signature 391 415 2.5E-107 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AM378_07125 debad01073e9229d0db63fa1e4fd36a4 1045 PRINTS PR00702 Acriflavin resistance protein family signature 551 568 2.5E-107 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AM378_07125 debad01073e9229d0db63fa1e4fd36a4 1045 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 2.5E-107 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AM378_07125 debad01073e9229d0db63fa1e4fd36a4 1045 SUPERFAMILY SSF82714 182 272 3.14E-22 T 15-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AM378_07125 debad01073e9229d0db63fa1e4fd36a4 1045 SUPERFAMILY SSF82693 671 859 1.67E-20 T 15-10-2018 AM378_07125 debad01073e9229d0db63fa1e4fd36a4 1045 Gene3D G3DSA:3.30.2090.10 180 277 0.0 T 15-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AM378_07125 debad01073e9229d0db63fa1e4fd36a4 1045 Gene3D G3DSA:1.20.1640.10 514 1026 0.0 T 15-10-2018 AM378_07125 debad01073e9229d0db63fa1e4fd36a4 1045 SUPERFAMILY SSF82693 564 670 2.67E-30 T 15-10-2018 AM378_07125 debad01073e9229d0db63fa1e4fd36a4 1045 Gene3D G3DSA:1.20.1640.10 8 513 0.0 T 15-10-2018 AM378_07125 debad01073e9229d0db63fa1e4fd36a4 1045 SUPERFAMILY SSF82693 135 330 2.67E-24 T 15-10-2018 AM378_07125 debad01073e9229d0db63fa1e4fd36a4 1045 Gene3D G3DSA:3.30.70.1320 133 330 0.0 T 15-10-2018 AM378_07125 debad01073e9229d0db63fa1e4fd36a4 1045 Gene3D G3DSA:3.30.70.1440 673 866 0.0 T 15-10-2018 AM378_07125 debad01073e9229d0db63fa1e4fd36a4 1045 SUPERFAMILY SSF82693 38 131 1.31E-26 T 15-10-2018 AM378_07125 debad01073e9229d0db63fa1e4fd36a4 1045 SUPERFAMILY SSF82866 296 497 4.58E-48 T 15-10-2018 AM378_05380 e87c0c27167ed579aa3bb6db53f95e19 378 SUPERFAMILY SSF52540 28 267 7.92E-81 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_05380 e87c0c27167ed579aa3bb6db53f95e19 378 SUPERFAMILY SSF50331 262 376 9.92E-12 T 15-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal AM378_05380 e87c0c27167ed579aa3bb6db53f95e19 378 ProSitePatterns PS00211 ABC transporters family signature. 158 172 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM378_05380 e87c0c27167ed579aa3bb6db53f95e19 378 Gene3D G3DSA:2.40.50.140 273 305 3.7E-6 T 15-10-2018 AM378_05380 e87c0c27167ed579aa3bb6db53f95e19 378 Gene3D G3DSA:2.40.50.100 306 357 3.7E-6 T 15-10-2018 AM378_05380 e87c0c27167ed579aa3bb6db53f95e19 378 Gene3D G3DSA:3.40.50.300 20 263 5.2E-75 T 15-10-2018 AM378_05380 e87c0c27167ed579aa3bb6db53f95e19 378 Pfam PF00005 ABC transporter 43 185 6.3E-34 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM378_05380 e87c0c27167ed579aa3bb6db53f95e19 378 TIGRFAM TIGR03258 PhnT: 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT 24 377 1.5E-162 T 15-10-2018 IPR017662 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT AM378_05380 e87c0c27167ed579aa3bb6db53f95e19 378 SMART SM00382 52 236 2.4E-19 T 15-10-2018 IPR003593 AAA+ ATPase domain AM378_05380 e87c0c27167ed579aa3bb6db53f95e19 378 Pfam PF08402 TOBE domain 303 375 1.0E-10 T 15-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 AM378_06350 e6a6992c50eb3c68b6783a5022871c60 1190 SUPERFAMILY SSF56003 312 744 1.28E-115 T 15-10-2018 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily GO:0016491|GO:0055114 AM378_06350 e6a6992c50eb3c68b6783a5022871c60 1190 Gene3D G3DSA:3.30.365.10 594 747 1.3E-38 T 15-10-2018 AM378_06350 e6a6992c50eb3c68b6783a5022871c60 1190 Gene3D G3DSA:1.10.760.10 756 916 1.8E-10 T 15-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM378_06350 e6a6992c50eb3c68b6783a5022871c60 1190 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 312 553 6.7E-33 T 15-10-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 AM378_06350 e6a6992c50eb3c68b6783a5022871c60 1190 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 46 201 6.0E-20 T 15-10-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 AM378_06350 e6a6992c50eb3c68b6783a5022871c60 1190 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 586 688 6.0E-13 T 15-10-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 AM378_06350 e6a6992c50eb3c68b6783a5022871c60 1190 Gene3D G3DSA:1.10.760.10 1066 1190 4.1E-18 T 15-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM378_06350 e6a6992c50eb3c68b6783a5022871c60 1190 Gene3D G3DSA:3.90.1170.50 178 232 3.2E-8 T 15-10-2018 AM378_06350 e6a6992c50eb3c68b6783a5022871c60 1190 SUPERFAMILY SSF56003 46 230 3.42E-30 T 15-10-2018 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily GO:0016491|GO:0055114 AM378_06350 e6a6992c50eb3c68b6783a5022871c60 1190 SMART SM01008 205 291 8.1E-19 T 15-10-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead AM378_06350 e6a6992c50eb3c68b6783a5022871c60 1190 Gene3D G3DSA:3.30.365.10 318 550 3.9E-49 T 15-10-2018 AM378_06350 e6a6992c50eb3c68b6783a5022871c60 1190 SUPERFAMILY SSF46626 941 1061 5.93E-14 T 15-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM378_06350 e6a6992c50eb3c68b6783a5022871c60 1190 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 1081 1162 1.2E-10 T 15-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM378_06350 e6a6992c50eb3c68b6783a5022871c60 1190 Gene3D G3DSA:3.30.365.10 342 433 3.9E-49 T 15-10-2018 AM378_06350 e6a6992c50eb3c68b6783a5022871c60 1190 SUPERFAMILY SSF46626 793 928 1.99E-25 T 15-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM378_06350 e6a6992c50eb3c68b6783a5022871c60 1190 Gene3D G3DSA:3.30.365.10 43 177 2.9E-28 T 15-10-2018 AM378_06350 e6a6992c50eb3c68b6783a5022871c60 1190 Gene3D G3DSA:1.10.760.10 942 1055 1.6E-8 T 15-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM378_06350 e6a6992c50eb3c68b6783a5022871c60 1190 SUPERFAMILY SSF54665 206 290 3.71E-8 T 15-10-2018 IPR036856 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead superfamily AM378_06350 e6a6992c50eb3c68b6783a5022871c60 1190 Pfam PF00034 Cytochrome c 806 905 4.9E-9 T 15-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM378_06350 e6a6992c50eb3c68b6783a5022871c60 1190 SUPERFAMILY SSF46626 1067 1178 2.6E-19 T 15-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM378_19970 95ace34fc92ab9b2d779a0a543c54881 674 Pfam PF13361 UvrD-like helicase C-terminal domain 271 613 5.8E-72 T 15-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 AM378_19970 95ace34fc92ab9b2d779a0a543c54881 674 TIGRFAM TIGR01074 rep: ATP-dependent DNA helicase Rep 2 666 0.0 T 15-10-2018 IPR005752 ATP-dependent DNA helicase Rep GO:0003677|GO:0004003|GO:0005524|GO:0006268 AM378_19970 95ace34fc92ab9b2d779a0a543c54881 674 Gene3D G3DSA:3.40.50.300 4 266 1.5E-101 T 15-10-2018 AM378_19970 95ace34fc92ab9b2d779a0a543c54881 674 Hamap MF_01920 ATP-dependent DNA helicase Rep [rep]. 1 668 41.056 T 15-10-2018 IPR005752 ATP-dependent DNA helicase Rep GO:0003677|GO:0004003|GO:0005524|GO:0006268 AM378_19970 95ace34fc92ab9b2d779a0a543c54881 674 Gene3D G3DSA:1.10.10.160 108 181 1.5E-101 T 15-10-2018 IPR013986 DExx box DNA helicase domain superfamily AM378_19970 95ace34fc92ab9b2d779a0a543c54881 674 Gene3D G3DSA:1.10.486.10 377 544 2.9E-135 T 15-10-2018 AM378_19970 95ace34fc92ab9b2d779a0a543c54881 674 Pfam PF00580 UvrD/REP helicase N-terminal domain 3 265 3.6E-75 T 15-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 AM378_19970 95ace34fc92ab9b2d779a0a543c54881 674 SUPERFAMILY SSF52540 2 637 8.68E-165 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_19970 95ace34fc92ab9b2d779a0a543c54881 674 Gene3D G3DSA:3.40.50.300 274 632 2.9E-135 T 15-10-2018 AM378_18860 d15dc7e9c8bc9630c0ae7911f90f9650 514 SUPERFAMILY SSF53649 5 510 2.09E-75 T 15-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 AM378_18860 d15dc7e9c8bc9630c0ae7911f90f9650 514 PIRSF PIRSF001492 1 514 6.6E-202 T 15-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AM378_18860 d15dc7e9c8bc9630c0ae7911f90f9650 514 Pfam PF06415 BPG-independent PGAM N-terminus (iPGM_N) 85 300 4.4E-81 T 15-10-2018 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AM378_18860 d15dc7e9c8bc9630c0ae7911f90f9650 514 TIGRFAM TIGR01307 pgm_bpd_ind: phosphoglycerate mutase (2,3-diphosphoglycerate-independent) 6 511 8.2E-234 T 15-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AM378_18860 d15dc7e9c8bc9630c0ae7911f90f9650 514 SUPERFAMILY SSF64158 79 311 6.02E-84 T 15-10-2018 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily GO:0004619|GO:0005737 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AM378_18860 d15dc7e9c8bc9630c0ae7911f90f9650 514 Gene3D G3DSA:3.40.720.10 7 510 1.4E-213 T 15-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 AM378_18860 d15dc7e9c8bc9630c0ae7911f90f9650 514 Pfam PF01676 Metalloenzyme superfamily 6 500 9.6E-82 T 15-10-2018 IPR006124 Metalloenzyme GO:0003824|GO:0046872 AM378_18860 d15dc7e9c8bc9630c0ae7911f90f9650 514 Gene3D G3DSA:3.40.1450.10 79 313 1.4E-213 T 15-10-2018 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily GO:0004619|GO:0005737 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AM378_18860 d15dc7e9c8bc9630c0ae7911f90f9650 514 Hamap MF_01038 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [gpmI]. 6 512 50.047 T 15-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AM378_17605 683926bd5440fda986f7e7a6a0f3435b 390 SUPERFAMILY SSF53383 1 389 2.89E-100 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM378_17605 683926bd5440fda986f7e7a6a0f3435b 390 TIGRFAM TIGR04350 C_S_lyase_PatB: putative C-S lyase 5 387 7.1E-126 T 15-10-2018 IPR027619 Putative C-S lyase KEGG: 00270+4.4.1.8|KEGG: 00450+4.4.1.8 AM378_17605 683926bd5440fda986f7e7a6a0f3435b 390 Gene3D G3DSA:3.40.640.10 63 287 4.1E-134 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AM378_17605 683926bd5440fda986f7e7a6a0f3435b 390 Pfam PF00155 Aminotransferase class I and II 40 385 6.2E-43 T 15-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AM378_17605 683926bd5440fda986f7e7a6a0f3435b 390 Gene3D G3DSA:3.90.1150.10 30 384 4.1E-134 T 15-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AM378_00590 30b0bfc03cd1483772d2033d88999903 275 SMART SM00382 51 248 1.0E-20 T 15-10-2018 IPR003593 AAA+ ATPase domain AM378_00590 30b0bfc03cd1483772d2033d88999903 275 ProSitePatterns PS00211 ABC transporters family signature. 172 186 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM378_00590 30b0bfc03cd1483772d2033d88999903 275 Pfam PF00005 ABC transporter 42 200 1.3E-35 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM378_00590 30b0bfc03cd1483772d2033d88999903 275 Gene3D G3DSA:3.40.50.300 24 275 2.9E-77 T 15-10-2018 AM378_00590 30b0bfc03cd1483772d2033d88999903 275 PIRSF PIRSF039085 23 275 7.1E-104 T 15-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 AM378_00590 30b0bfc03cd1483772d2033d88999903 275 SUPERFAMILY SSF52540 26 270 7.26E-76 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_08185 80400285dbcd5d7e8035b9eae74d0aed 333 Gene3D G3DSA:1.10.260.40 3 65 1.4E-18 T 15-10-2018 AM378_08185 80400285dbcd5d7e8035b9eae74d0aed 333 SUPERFAMILY SSF47413 8 66 3.94E-14 T 15-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AM378_08185 80400285dbcd5d7e8035b9eae74d0aed 333 SMART SM00354 8 78 4.5E-18 T 15-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM378_08185 80400285dbcd5d7e8035b9eae74d0aed 333 Pfam PF13407 Periplasmic binding protein domain 69 268 3.5E-22 T 15-10-2018 IPR025997 Periplasmic binding protein AM378_08185 80400285dbcd5d7e8035b9eae74d0aed 333 Gene3D G3DSA:3.40.50.2300 165 333 1.3E-26 T 15-10-2018 AM378_08185 80400285dbcd5d7e8035b9eae74d0aed 333 Pfam PF00356 Bacterial regulatory proteins, lacI family 10 55 5.0E-9 T 15-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM378_08185 80400285dbcd5d7e8035b9eae74d0aed 333 Gene3D G3DSA:3.40.50.2300 66 162 1.4E-21 T 15-10-2018 AM378_08185 80400285dbcd5d7e8035b9eae74d0aed 333 SUPERFAMILY SSF53822 66 332 2.94E-47 T 15-10-2018 IPR028082 Periplasmic binding protein-like I AM378_04955 a35ab7314a460011745aeea40fb40917 362 Gene3D G3DSA:1.20.5.460 282 309 7.1E-121 T 15-10-2018 AM378_04955 a35ab7314a460011745aeea40fb40917 362 Gene3D G3DSA:3.30.1370.60 64 281 7.1E-121 T 15-10-2018 AM378_04955 a35ab7314a460011745aeea40fb40917 362 Pfam PF02615 Malate/L-lactate dehydrogenase 10 338 9.6E-111 T 15-10-2018 IPR003767 Malate/L-lactate dehydrogenase-like GO:0016491|GO:0055114 AM378_04955 a35ab7314a460011745aeea40fb40917 362 SUPERFAMILY SSF89733 6 347 4.45E-100 T 15-10-2018 IPR036111 Malate/L-sulfolactate/L-lactate dehydrogenase-like superfamily GO:0016491|GO:0055114 AM378_04955 a35ab7314a460011745aeea40fb40917 362 Gene3D G3DSA:1.10.1530.10 12 346 7.1E-121 T 15-10-2018 AM378_05300 a2c5612e3121d393a508f879f38fa0e5 254 Gene3D G3DSA:2.60.40.10 34 154 3.3E-9 T 15-10-2018 IPR013783 Immunoglobulin-like fold AM378_05300 a2c5612e3121d393a508f879f38fa0e5 254 SUPERFAMILY SSF49354 22 154 4.19E-25 T 15-10-2018 IPR008962 PapD-like superfamily AM378_05300 a2c5612e3121d393a508f879f38fa0e5 254 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 36 153 4.2E-18 T 15-10-2018 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 AM378_09920 9a1222ff76c8ac0683c6d137797481d3 1211 Pfam PF14331 ImcF-related N-terminal domain 210 484 3.9E-99 T 15-10-2018 IPR025743 ImcF-related, N-terminal domain AM378_09920 9a1222ff76c8ac0683c6d137797481d3 1211 Pfam PF06744 Type VI secretion protein IcmF C-terminal 965 1165 4.6E-56 T 15-10-2018 IPR010623 Type VI secretion system IcmF, C-terminal AM378_09920 9a1222ff76c8ac0683c6d137797481d3 1211 SUPERFAMILY SSF52540 138 309 5.68E-10 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_09920 9a1222ff76c8ac0683c6d137797481d3 1211 Pfam PF06761 Intracellular multiplication and human macrophage-killing 536 840 8.7E-86 T 15-10-2018 IPR009612 ImcF-related AM378_09920 9a1222ff76c8ac0683c6d137797481d3 1211 TIGRFAM TIGR03348 VI_IcmF: type VI secretion protein IcmF 15 1209 0.0 T 15-10-2018 IPR017731 Type VI secretion system, IcmF AM378_09175 ff20386d34217b4f13e69d60fa067399 377 Gene3D G3DSA:3.10.560.10 55 342 6.2E-121 T 15-10-2018 AM378_09175 ff20386d34217b4f13e69d60fa067399 377 Gene3D G3DSA:1.20.5.70 345 377 9.9E-16 T 15-10-2018 AM378_09175 ff20386d34217b4f13e69d60fa067399 377 Gene3D G3DSA:3.30.1950.10 88 169 6.2E-121 T 15-10-2018 AM378_09175 ff20386d34217b4f13e69d60fa067399 377 Pfam PF02563 Polysaccharide biosynthesis/export protein 81 165 6.0E-27 T 15-10-2018 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 AM378_09175 ff20386d34217b4f13e69d60fa067399 377 Gene3D G3DSA:3.10.560.10 66 254 6.2E-121 T 15-10-2018 AM378_09175 ff20386d34217b4f13e69d60fa067399 377 Pfam PF10531 SLBB domain 173 218 5.4E-8 T 15-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM378_20305 f1d6f9e15406165d47d6b97dfd5d3384 223 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM378_20305 f1d6f9e15406165d47d6b97dfd5d3384 223 TIGRFAM TIGR02673 FtsE: cell division ATP-binding protein FtsE 1 214 5.3E-94 T 15-10-2018 IPR005286 Cell division protein FtsE, ATP-binding GO:0005524|GO:0051301 AM378_20305 f1d6f9e15406165d47d6b97dfd5d3384 223 Pfam PF00005 ABC transporter 18 165 8.6E-36 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM378_20305 f1d6f9e15406165d47d6b97dfd5d3384 223 SMART SM00382 27 214 2.5E-9 T 15-10-2018 IPR003593 AAA+ ATPase domain AM378_20305 f1d6f9e15406165d47d6b97dfd5d3384 223 Gene3D G3DSA:3.40.50.300 1 222 6.6E-63 T 15-10-2018 AM378_20305 f1d6f9e15406165d47d6b97dfd5d3384 223 SUPERFAMILY SSF52540 1 217 2.6E-66 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_02480 3c761aa2ad1e6dda5e332b2cc2f668d7 227 SMART SM00418 12 91 1.3E-17 T 15-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AM378_02480 3c761aa2ad1e6dda5e332b2cc2f668d7 227 SUPERFAMILY SSF46785 2 91 1.72E-19 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM378_02480 3c761aa2ad1e6dda5e332b2cc2f668d7 227 Gene3D G3DSA:1.10.10.10 5 92 3.5E-18 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_02480 3c761aa2ad1e6dda5e332b2cc2f668d7 227 Pfam PF01022 Bacterial regulatory protein, arsR family 19 64 8.3E-11 T 15-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AM378_00930 13300491ea70591cb97410be3ad6250e 689 SUPERFAMILY SSF56784 299 565 9.41E-38 T 15-10-2018 IPR036412 HAD-like superfamily AM378_00930 13300491ea70591cb97410be3ad6250e 689 SUPERFAMILY SSF81665 30 305 1.7E-11 T 15-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 AM378_00930 13300491ea70591cb97410be3ad6250e 689 SUPERFAMILY SSF81660 322 456 2.49E-37 T 15-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 AM378_00930 13300491ea70591cb97410be3ad6250e 689 Hamap MF_00285 Potassium-transporting ATPase ATP-binding subunit [kdpB]. 8 686 41.378 T 15-10-2018 IPR006391 P-type ATPase, B chain, subfamily IA GO:0005524|GO:0006813|GO:0008556|GO:0016021 AM378_00930 13300491ea70591cb97410be3ad6250e 689 Pfam PF00702 haloacid dehalogenase-like hydrolase 307 536 7.9E-36 T 15-10-2018 AM378_00930 13300491ea70591cb97410be3ad6250e 689 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 469 479 3.9E-24 T 15-10-2018 AM378_00930 13300491ea70591cb97410be3ad6250e 689 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 154 168 3.9E-24 T 15-10-2018 AM378_00930 13300491ea70591cb97410be3ad6250e 689 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 522 541 3.9E-24 T 15-10-2018 AM378_00930 13300491ea70591cb97410be3ad6250e 689 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 311 325 3.9E-24 T 15-10-2018 AM378_00930 13300491ea70591cb97410be3ad6250e 689 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 545 557 3.9E-24 T 15-10-2018 AM378_00930 13300491ea70591cb97410be3ad6250e 689 TIGRFAM TIGR01497 kdpB: K+-transporting ATPase, B subunit 3 682 0.0 T 15-10-2018 IPR006391 P-type ATPase, B chain, subfamily IA GO:0005524|GO:0006813|GO:0008556|GO:0016021 AM378_00930 13300491ea70591cb97410be3ad6250e 689 SUPERFAMILY SSF81653 111 207 1.31E-22 T 15-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 AM378_00930 13300491ea70591cb97410be3ad6250e 689 Gene3D G3DSA:3.40.1110.10 322 457 2.5E-56 T 15-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 AM378_00930 13300491ea70591cb97410be3ad6250e 689 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 313 319 - T 15-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 AM378_00930 13300491ea70591cb97410be3ad6250e 689 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 72 347 4.1E-35 T 15-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 AM378_00930 13300491ea70591cb97410be3ad6250e 689 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 379 610 1.5E-47 T 15-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 AM378_00930 13300491ea70591cb97410be3ad6250e 689 Pfam PF00122 E1-E2 ATPase 113 288 1.9E-33 T 15-10-2018 AM378_00930 13300491ea70591cb97410be3ad6250e 689 Gene3D G3DSA:2.70.150.20 106 212 3.5E-28 T 15-10-2018 AM378_03335 fac6c6a66398ee88f575d534919d3bf6 333 Gene3D G3DSA:2.40.30.10 9 102 4.6E-19 T 15-10-2018 AM378_03335 fac6c6a66398ee88f575d534919d3bf6 333 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 284 292 - T 15-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 AM378_03335 fac6c6a66398ee88f575d534919d3bf6 333 SUPERFAMILY SSF52343 104 238 6.16E-33 T 15-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AM378_03335 fac6c6a66398ee88f575d534919d3bf6 333 Gene3D G3DSA:3.10.20.30 250 333 1.4E-21 T 15-10-2018 IPR012675 Beta-grasp domain superfamily AM378_03335 fac6c6a66398ee88f575d534919d3bf6 333 Gene3D G3DSA:3.40.50.80 106 244 6.7E-30 T 15-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AM378_03335 fac6c6a66398ee88f575d534919d3bf6 333 Pfam PF00970 Oxidoreductase FAD-binding domain 37 104 2.3E-7 T 15-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 AM378_03335 fac6c6a66398ee88f575d534919d3bf6 333 SUPERFAMILY SSF63380 11 104 2.11E-19 T 15-10-2018 IPR017938 Riboflavin synthase-like beta-barrel AM378_03335 fac6c6a66398ee88f575d534919d3bf6 333 Pfam PF00175 Oxidoreductase NAD-binding domain 116 219 3.6E-13 T 15-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 AM378_03335 fac6c6a66398ee88f575d534919d3bf6 333 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 259 325 6.4E-13 T 15-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AM378_03335 fac6c6a66398ee88f575d534919d3bf6 333 PRINTS PR00406 Cytochrome B5 reductase signature 115 134 2.8E-5 T 15-10-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 AM378_03335 fac6c6a66398ee88f575d534919d3bf6 333 PRINTS PR00406 Cytochrome B5 reductase signature 205 213 2.8E-5 T 15-10-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 AM378_03335 fac6c6a66398ee88f575d534919d3bf6 333 PRINTS PR00406 Cytochrome B5 reductase signature 55 62 2.8E-5 T 15-10-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 AM378_03335 fac6c6a66398ee88f575d534919d3bf6 333 SUPERFAMILY SSF54292 227 332 1.84E-24 T 15-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 AM378_11950 047546211f876546fc8dda997f30567c 245 SUPERFAMILY SSF110997 167 240 4.18E-13 T 15-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 AM378_11950 047546211f876546fc8dda997f30567c 245 Pfam PF05036 Sporulation related domain 167 240 9.2E-12 T 15-10-2018 IPR007730 Sporulation-like domain GO:0042834 AM378_11950 047546211f876546fc8dda997f30567c 245 Hamap MF_02022 Cell division protein DedD [dedD]. 14 245 26.43 T 15-10-2018 IPR032898 Cell division protein DedD GO:0030428|GO:0032506 AM378_11950 047546211f876546fc8dda997f30567c 245 PRINTS PR01217 Proline rich extensin signature 96 117 9.6E-10 T 15-10-2018 AM378_11950 047546211f876546fc8dda997f30567c 245 PRINTS PR01217 Proline rich extensin signature 130 146 9.6E-10 T 15-10-2018 AM378_11950 047546211f876546fc8dda997f30567c 245 PRINTS PR01217 Proline rich extensin signature 147 164 9.6E-10 T 15-10-2018 AM378_11950 047546211f876546fc8dda997f30567c 245 PRINTS PR01217 Proline rich extensin signature 55 67 9.6E-10 T 15-10-2018 AM378_11950 047546211f876546fc8dda997f30567c 245 Gene3D G3DSA:3.30.70.1070 163 239 3.0E-7 T 15-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 AM378_20965 ec2a3854f7784fd7f0dc2f0657f906a8 598 SUPERFAMILY SSF51905 3 420 1.26E-72 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AM378_20965 ec2a3854f7784fd7f0dc2f0657f906a8 598 Gene3D G3DSA:3.90.700.10 237 363 7.8E-165 T 15-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 AM378_20965 ec2a3854f7784fd7f0dc2f0657f906a8 598 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 43 52 - T 15-10-2018 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AM378_20965 ec2a3854f7784fd7f0dc2f0657f906a8 598 PIRSF PIRSF000171 1 574 1.4E-41 T 15-10-2018 AM378_20965 ec2a3854f7784fd7f0dc2f0657f906a8 598 Pfam PF02910 Fumarate reductase flavoprotein C-term 453 581 4.7E-38 T 15-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AM378_20965 ec2a3854f7784fd7f0dc2f0657f906a8 598 Pfam PF00890 FAD binding domain 7 397 4.8E-114 T 15-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 AM378_20965 ec2a3854f7784fd7f0dc2f0657f906a8 598 SUPERFAMILY SSF56425 227 358 4.78E-43 T 15-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 AM378_20965 ec2a3854f7784fd7f0dc2f0657f906a8 598 TIGRFAM TIGR01176 fum_red_Fp: fumarate reductase (quinol), flavoprotein subunit 3 582 0.0 T 15-10-2018 IPR005884 Fumarate reductase, flavoprotein subunit GO:0009061|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.4|KEGG: 00620+1.3.5.4|KEGG: 00650+1.3.5.4|KEGG: 00720+1.3.5.4|MetaCyc: PWY-5392|MetaCyc: PWY-5913|MetaCyc: PWY-7384 AM378_20965 ec2a3854f7784fd7f0dc2f0657f906a8 598 Gene3D G3DSA:1.20.58.100 424 538 1.9E-34 T 15-10-2018 AM378_20965 ec2a3854f7784fd7f0dc2f0657f906a8 598 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 3.7E-10 T 15-10-2018 AM378_20965 ec2a3854f7784fd7f0dc2f0657f906a8 598 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 360 382 3.7E-10 T 15-10-2018 AM378_20965 ec2a3854f7784fd7f0dc2f0657f906a8 598 SUPERFAMILY SSF46977 444 590 2.22E-45 T 15-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AM378_20965 ec2a3854f7784fd7f0dc2f0657f906a8 598 Gene3D G3DSA:4.10.80.40 543 577 4.2E-21 T 15-10-2018 AM378_20965 ec2a3854f7784fd7f0dc2f0657f906a8 598 Gene3D G3DSA:3.50.50.60 7 409 7.8E-165 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AM378_20965 ec2a3854f7784fd7f0dc2f0657f906a8 598 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 375 382 2.1E-5 T 15-10-2018 AM378_20965 ec2a3854f7784fd7f0dc2f0657f906a8 598 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 2.1E-5 T 15-10-2018 AM378_20965 ec2a3854f7784fd7f0dc2f0657f906a8 598 TIGRFAM TIGR01812 sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 7 581 3.5E-243 T 15-10-2018 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0016627|GO:0022900|GO:0050660|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AM378_04990 ec31d0ac7cc5d46c11447162d9b5df65 150 Pfam PF00583 Acetyltransferase (GNAT) family 42 140 3.5E-13 T 15-10-2018 IPR000182 GNAT domain AM378_04990 ec31d0ac7cc5d46c11447162d9b5df65 150 Gene3D G3DSA:3.40.630.30 5 150 2.4E-37 T 15-10-2018 AM378_04990 ec31d0ac7cc5d46c11447162d9b5df65 150 SUPERFAMILY SSF55729 8 140 4.56E-29 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase AM378_06505 e5cf8a9bebcddc20dda144e119d6cecb 304 SUPERFAMILY SSF53850 91 301 1.18E-36 T 15-10-2018 AM378_06505 e5cf8a9bebcddc20dda144e119d6cecb 304 Pfam PF03466 LysR substrate binding domain 90 300 7.8E-41 T 15-10-2018 IPR005119 LysR, substrate-binding AM378_06505 e5cf8a9bebcddc20dda144e119d6cecb 304 Gene3D G3DSA:3.40.190.10 95 292 3.9E-63 T 15-10-2018 AM378_06505 e5cf8a9bebcddc20dda144e119d6cecb 304 Gene3D G3DSA:1.10.10.10 4 94 4.0E-27 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_06505 e5cf8a9bebcddc20dda144e119d6cecb 304 Gene3D G3DSA:3.40.190.10 167 275 3.9E-63 T 15-10-2018 AM378_06505 e5cf8a9bebcddc20dda144e119d6cecb 304 SUPERFAMILY SSF46785 3 113 1.81E-21 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM378_06505 e5cf8a9bebcddc20dda144e119d6cecb 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 9.9E-7 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_06505 e5cf8a9bebcddc20dda144e119d6cecb 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 9.9E-7 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_06505 e5cf8a9bebcddc20dda144e119d6cecb 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 9.9E-7 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_06505 e5cf8a9bebcddc20dda144e119d6cecb 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 64 6.8E-20 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_19015 348c491947b5ce9ecdc326d60c564223 394 Pfam PF01773 Na+ dependent nucleoside transporter N-terminus 10 82 1.2E-18 T 15-10-2018 IPR002668 Concentrative nucleoside transporter N-terminal domain Reactome: R-HSA-83936 AM378_19015 348c491947b5ce9ecdc326d60c564223 394 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 193 392 4.8E-59 T 15-10-2018 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: R-HSA-83936 AM378_04395 eac6178f3d23878db07e7612af38c2fa 156 Pfam PF01325 Iron dependent repressor, N-terminal DNA binding domain 39 93 3.2E-11 T 15-10-2018 IPR022687 DTXR-type HTH domain GO:0003677 AM378_04395 eac6178f3d23878db07e7612af38c2fa 156 Gene3D G3DSA:1.10.60.10 96 155 2.9E-21 T 15-10-2018 IPR036421 Iron dependent repressor, metal binding and dimerisation domain superfamily GO:0046914|GO:0046983 AM378_04395 eac6178f3d23878db07e7612af38c2fa 156 SMART SM00529 57 156 7.3E-31 T 15-10-2018 IPR022689 Iron dependent repressor GO:0003700|GO:0006355|GO:0046914 AM378_04395 eac6178f3d23878db07e7612af38c2fa 156 Pfam PF02742 Iron dependent repressor, metal binding and dimerisation domain 96 152 2.8E-12 T 15-10-2018 IPR001367 Iron dependent repressor, metal binding and dimerisation domain GO:0046914|GO:0046983 AM378_04395 eac6178f3d23878db07e7612af38c2fa 156 SUPERFAMILY SSF46785 46 153 1.07E-11 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM378_04395 eac6178f3d23878db07e7612af38c2fa 156 Gene3D G3DSA:1.10.10.10 26 95 2.0E-19 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_08730 73839cd231c416bc370ff70328568b5f 323 Gene3D G3DSA:3.40.50.150 90 323 2.9E-20 T 15-10-2018 AM378_08730 73839cd231c416bc370ff70328568b5f 323 TIGRFAM TIGR00452 TIGR00452: tRNA (mo5U34)-methyltransferase 7 321 8.4E-144 T 15-10-2018 IPR010017 tRNA U34 carboxymethyltransferase GO:0002098|GO:0016765 AM378_08730 73839cd231c416bc370ff70328568b5f 323 Hamap MF_01590 tRNA U34 carboxymethyltransferase [cmoB]. 12 322 53.235 T 15-10-2018 IPR010017 tRNA U34 carboxymethyltransferase GO:0002098|GO:0016765 AM378_08730 73839cd231c416bc370ff70328568b5f 323 Pfam PF08003 Protein of unknown function (DUF1698) 7 322 4.8E-164 T 15-10-2018 IPR027555 tRNA (mo5U34)-methyltransferase-like AM378_08730 73839cd231c416bc370ff70328568b5f 323 SUPERFAMILY SSF53335 89 316 8.44E-31 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM378_00025 a506c50c585f487d27913a46b715a8e4 571 Pfam PF12793 Sugar transport-related sRNA regulator N-term 6 119 1.9E-39 T 15-10-2018 IPR025370 Transcriptional regulator SgrR, N-terminal HTH domain AM378_00025 a506c50c585f487d27913a46b715a8e4 571 SUPERFAMILY SSF53850 122 562 3.62E-56 T 15-10-2018 AM378_00025 a506c50c585f487d27913a46b715a8e4 571 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 164 354 1.5E-17 T 15-10-2018 IPR000914 Solute-binding protein family 5 domain AM378_00025 a506c50c585f487d27913a46b715a8e4 571 Gene3D G3DSA:3.40.190.10 116 310 2.0E-27 T 15-10-2018 AM378_23235 2768a45bc74c8d212c637b184080c8d1 354 Pfam PF00154 recA bacterial DNA recombination protein 9 270 4.4E-142 T 15-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AM378_23235 2768a45bc74c8d212c637b184080c8d1 354 SMART SM00382 59 230 1.1E-8 T 15-10-2018 IPR003593 AAA+ ATPase domain AM378_23235 2768a45bc74c8d212c637b184080c8d1 354 ProSitePatterns PS00321 recA signature. 215 223 - T 15-10-2018 IPR020584 DNA recombination/repair protein RecA, conserved site GO:0003677|GO:0005524|GO:0006259|GO:0008094 AM378_23235 2768a45bc74c8d212c637b184080c8d1 354 Gene3D G3DSA:3.40.50.300 28 269 2.2E-82 T 15-10-2018 AM378_23235 2768a45bc74c8d212c637b184080c8d1 354 Hamap MF_00268 Protein RecA [recA]. 7 331 50.79 T 15-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AM378_23235 2768a45bc74c8d212c637b184080c8d1 354 PRINTS PR00142 RecA protein signature 212 240 3.4E-84 T 15-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AM378_23235 2768a45bc74c8d212c637b184080c8d1 354 PRINTS PR00142 RecA protein signature 299 316 3.4E-84 T 15-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AM378_23235 2768a45bc74c8d212c637b184080c8d1 354 PRINTS PR00142 RecA protein signature 129 158 3.4E-84 T 15-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AM378_23235 2768a45bc74c8d212c637b184080c8d1 354 PRINTS PR00142 RecA protein signature 167 196 3.4E-84 T 15-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AM378_23235 2768a45bc74c8d212c637b184080c8d1 354 PRINTS PR00142 RecA protein signature 245 274 3.4E-84 T 15-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AM378_23235 2768a45bc74c8d212c637b184080c8d1 354 PRINTS PR00142 RecA protein signature 95 124 3.4E-84 T 15-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AM378_23235 2768a45bc74c8d212c637b184080c8d1 354 SUPERFAMILY SSF52540 5 269 2.6E-65 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_23235 2768a45bc74c8d212c637b184080c8d1 354 TIGRFAM TIGR02012 tigrfam_recA: protein RecA 6 326 2.6E-171 T 15-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AM378_23235 2768a45bc74c8d212c637b184080c8d1 354 Gene3D G3DSA:3.30.250.10 272 329 2.8E-25 T 15-10-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal AM378_23235 2768a45bc74c8d212c637b184080c8d1 354 SUPERFAMILY SSF54752 272 326 2.22E-20 T 15-10-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal AM378_08375 be13cd300d2530d2ed172942c95a1d6b 133 Pfam PF00293 NUDIX domain 5 124 4.3E-19 T 15-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 AM378_08375 be13cd300d2530d2ed172942c95a1d6b 133 PRINTS PR00502 NUDIX hydrolase family signature 46 61 3.3E-7 T 15-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 AM378_08375 be13cd300d2530d2ed172942c95a1d6b 133 PRINTS PR00502 NUDIX hydrolase family signature 32 46 3.3E-7 T 15-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 AM378_08375 be13cd300d2530d2ed172942c95a1d6b 133 Gene3D G3DSA:3.90.79.10 1 131 8.0E-38 T 15-10-2018 AM378_08375 be13cd300d2530d2ed172942c95a1d6b 133 SUPERFAMILY SSF55811 1 125 2.3E-33 T 15-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 AM378_08375 be13cd300d2530d2ed172942c95a1d6b 133 ProSitePatterns PS00893 Nudix box signature. 37 58 - T 15-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 AM378_14240 752252bb8529e3950b30146466f7ca00 319 Gene3D G3DSA:3.90.226.10 4 319 3.7E-124 T 15-10-2018 AM378_14240 752252bb8529e3950b30146466f7ca00 319 Pfam PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit 5 150 2.2E-63 T 15-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 AM378_14240 752252bb8529e3950b30146466f7ca00 319 SUPERFAMILY SSF52096 5 318 8.85E-106 T 15-10-2018 IPR029045 ClpP/crotonase-like domain superfamily AM378_14240 752252bb8529e3950b30146466f7ca00 319 TIGRFAM TIGR00513 accA: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit 2 319 5.5E-172 T 15-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 AM378_14240 752252bb8529e3950b30146466f7ca00 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 91 102 2.0E-49 T 15-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 AM378_14240 752252bb8529e3950b30146466f7ca00 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 200 209 2.0E-49 T 15-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 AM378_14240 752252bb8529e3950b30146466f7ca00 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 156 169 2.0E-49 T 15-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 AM378_14240 752252bb8529e3950b30146466f7ca00 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 116 134 2.0E-49 T 15-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 AM378_14240 752252bb8529e3950b30146466f7ca00 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 172 185 2.0E-49 T 15-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 AM378_14240 752252bb8529e3950b30146466f7ca00 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 137 153 2.0E-49 T 15-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 AM378_14240 752252bb8529e3950b30146466f7ca00 319 Hamap MF_00823 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha [accA]. 5 319 50.643 T 15-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 AM378_23120 15f21ece218752929a25208644bba3aa 256 Gene3D G3DSA:3.40.190.10 29 245 1.2E-63 T 15-10-2018 AM378_23120 15f21ece218752929a25208644bba3aa 256 SMART SM00079 26 248 1.8E-5 T 15-10-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 AM378_23120 15f21ece218752929a25208644bba3aa 256 Gene3D G3DSA:3.40.190.10 111 208 1.2E-63 T 15-10-2018 AM378_23120 15f21ece218752929a25208644bba3aa 256 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 28 247 2.5E-60 T 15-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AM378_23120 15f21ece218752929a25208644bba3aa 256 SMART SM00062 26 249 1.9E-58 T 15-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AM378_23120 15f21ece218752929a25208644bba3aa 256 SUPERFAMILY SSF53850 1 249 3.61E-65 T 15-10-2018 AM378_17200 3cee73bd788637407686f673f99ed1fa 455 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 9 455 4.0E-131 T 15-10-2018 IPR001341 Aspartate kinase GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 AM378_17200 3cee73bd788637407686f673f99ed1fa 455 Gene3D G3DSA:3.30.70.260 315 389 5.2E-47 T 15-10-2018 AM378_17200 3cee73bd788637407686f673f99ed1fa 455 SUPERFAMILY SSF53633 10 297 3.14E-74 T 15-10-2018 IPR036393 Acetylglutamate kinase-like superfamily AM378_17200 3cee73bd788637407686f673f99ed1fa 455 Gene3D G3DSA:1.20.120.1320 48 140 3.3E-103 T 15-10-2018 AM378_17200 3cee73bd788637407686f673f99ed1fa 455 TIGRFAM TIGR00656 asp_kin_monofn: aspartate kinase, monofunctional class 9 455 1.1E-141 T 15-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 AM378_17200 3cee73bd788637407686f673f99ed1fa 455 PIRSF PIRSF000726 8 455 3.2E-147 T 15-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 AM378_17200 3cee73bd788637407686f673f99ed1fa 455 Gene3D G3DSA:3.30.70.260 309 453 5.2E-47 T 15-10-2018 AM378_17200 3cee73bd788637407686f673f99ed1fa 455 SUPERFAMILY SSF55021 302 400 5.83E-17 T 15-10-2018 AM378_17200 3cee73bd788637407686f673f99ed1fa 455 Pfam PF00696 Amino acid kinase family 10 283 5.3E-47 T 15-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 AM378_17200 3cee73bd788637407686f673f99ed1fa 455 Gene3D G3DSA:3.40.1160.10 12 295 3.3E-103 T 15-10-2018 IPR036393 Acetylglutamate kinase-like superfamily AM378_17200 3cee73bd788637407686f673f99ed1fa 455 ProSitePatterns PS00324 Aspartokinase signature. 12 20 - T 15-10-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 AM378_17200 3cee73bd788637407686f673f99ed1fa 455 SUPERFAMILY SSF55021 383 454 5.15E-13 T 15-10-2018 AM378_21865 84921256eca40ef26dfa4e5d1c1fe5b0 508 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 15 189 5.7E-13 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AM378_21865 84921256eca40ef26dfa4e5d1c1fe5b0 508 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 323 505 1.0E-18 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AM378_21865 84921256eca40ef26dfa4e5d1c1fe5b0 508 SUPERFAMILY SSF161098 300 488 1.57E-18 T 15-10-2018 IPR035906 MetI-like superfamily AM378_21865 84921256eca40ef26dfa4e5d1c1fe5b0 508 Gene3D G3DSA:1.10.3720.10 1 199 2.0E-22 T 15-10-2018 IPR035906 MetI-like superfamily AM378_21865 84921256eca40ef26dfa4e5d1c1fe5b0 508 Gene3D G3DSA:1.10.3720.10 294 501 9.5E-20 T 15-10-2018 IPR035906 MetI-like superfamily AM378_21865 84921256eca40ef26dfa4e5d1c1fe5b0 508 SUPERFAMILY SSF161098 3 189 4.19E-19 T 15-10-2018 IPR035906 MetI-like superfamily AM378_12685 c37acc5fd186f03609dd6addb29b117f 708 SUPERFAMILY SSF53474 443 681 4.55E-45 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold AM378_12685 c37acc5fd186f03609dd6addb29b117f 708 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 557 577 3.4E-50 T 15-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AM378_12685 c37acc5fd186f03609dd6addb29b117f 708 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 527 546 3.4E-50 T 15-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AM378_12685 c37acc5fd186f03609dd6addb29b117f 708 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 499 523 3.4E-50 T 15-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AM378_12685 c37acc5fd186f03609dd6addb29b117f 708 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 633 655 3.4E-50 T 15-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AM378_12685 c37acc5fd186f03609dd6addb29b117f 708 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 473 491 3.4E-50 T 15-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AM378_12685 c37acc5fd186f03609dd6addb29b117f 708 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 615 630 3.4E-50 T 15-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AM378_12685 c37acc5fd186f03609dd6addb29b117f 708 Pfam PF00326 Prolyl oligopeptidase family 488 700 3.5E-65 T 15-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 AM378_12685 c37acc5fd186f03609dd6addb29b117f 708 SUPERFAMILY SSF50993 29 434 4.45E-86 T 15-10-2018 AM378_12685 c37acc5fd186f03609dd6addb29b117f 708 Gene3D G3DSA:2.130.10.120 102 432 2.1E-245 T 15-10-2018 AM378_12685 c37acc5fd186f03609dd6addb29b117f 708 Gene3D G3DSA:3.40.50.1820 51 700 2.1E-245 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold AM378_12685 c37acc5fd186f03609dd6addb29b117f 708 ProSitePatterns PS00708 Prolyl endopeptidase family serine active site. 534 564 - T 15-10-2018 IPR002471 Peptidase S9, serine active site GO:0004252|GO:0006508 AM378_12685 c37acc5fd186f03609dd6addb29b117f 708 Pfam PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain 33 431 2.2E-93 T 15-10-2018 IPR023302 Peptidase S9A, N-terminal domain GO:0004252|GO:0070008 AM378_00900 b0c518ef3eb2cec3f37f77055e2db40b 547 SUPERFAMILY SSF53738 209 317 2.59E-9 T 15-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AM378_00900 b0c518ef3eb2cec3f37f77055e2db40b 547 TIGRFAM TIGR01132 pgm: phosphoglucomutase, alpha-D-glucose phosphate-specific 1 543 0.0 T 15-10-2018 IPR005852 Phosphoglucomutase, alpha-D-glucose specific GO:0004614|GO:0005975 KEGG: 00010+5.4.2.2|KEGG: 00030+5.4.2.2|KEGG: 00052+5.4.2.2|KEGG: 00230+5.4.2.2|KEGG: 00500+5.4.2.2|KEGG: 00520+5.4.2.2|KEGG: 00521+5.4.2.2|MetaCyc: PWY-2723|MetaCyc: PWY-3801|MetaCyc: PWY-5384|MetaCyc: PWY-5661|MetaCyc: PWY-5940|MetaCyc: PWY-5941|MetaCyc: PWY-622|MetaCyc: PWY-6317|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-6981|MetaCyc: PWY-7238|MetaCyc: PWY-7343|MetaCyc: PWY-7900|MetaCyc: PWY-7902 AM378_00900 b0c518ef3eb2cec3f37f77055e2db40b 547 SUPERFAMILY SSF55957 433 543 8.63E-19 T 15-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AM378_00900 b0c518ef3eb2cec3f37f77055e2db40b 547 Gene3D G3DSA:3.30.310.50 443 546 7.8E-35 T 15-10-2018 AM378_00900 b0c518ef3eb2cec3f37f77055e2db40b 547 SUPERFAMILY SSF53738 305 446 9.71E-32 T 15-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AM378_00900 b0c518ef3eb2cec3f37f77055e2db40b 547 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 483 539 1.2E-7 T 15-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AM378_00900 b0c518ef3eb2cec3f37f77055e2db40b 547 SUPERFAMILY SSF53738 26 235 2.14E-52 T 15-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AM378_00900 b0c518ef3eb2cec3f37f77055e2db40b 547 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 140 149 - T 15-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AM378_00900 b0c518ef3eb2cec3f37f77055e2db40b 547 Gene3D G3DSA:3.40.120.10 319 442 1.1E-35 T 15-10-2018 AM378_00900 b0c518ef3eb2cec3f37f77055e2db40b 547 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 320 440 6.1E-29 T 15-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AM378_00900 b0c518ef3eb2cec3f37f77055e2db40b 547 Gene3D G3DSA:3.40.120.10 221 318 1.3E-45 T 15-10-2018 AM378_00900 b0c518ef3eb2cec3f37f77055e2db40b 547 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 210 317 8.6E-19 T 15-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AM378_00900 b0c518ef3eb2cec3f37f77055e2db40b 547 Gene3D G3DSA:3.40.120.10 12 218 6.2E-78 T 15-10-2018 AM378_00900 b0c518ef3eb2cec3f37f77055e2db40b 547 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 40 180 3.0E-38 T 15-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AM378_02020 f9b2d108c11fe746b20cc883a086334a 309 Gene3D G3DSA:3.40.190.120 132 245 1.6E-97 T 15-10-2018 AM378_02020 f9b2d108c11fe746b20cc883a086334a 309 SUPERFAMILY SSF53850 28 307 3.47E-59 T 15-10-2018 AM378_02020 f9b2d108c11fe746b20cc883a086334a 309 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 28 303 6.1E-57 T 15-10-2018 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0022857|GO:0043190|GO:0055085 AM378_02020 f9b2d108c11fe746b20cc883a086334a 309 Gene3D G3DSA:3.40.190.10 31 305 1.6E-97 T 15-10-2018 AM378_04700 87dba9e88c4655ff9a892c9ba3c5712d 1029 SUPERFAMILY SSF74650 713 999 5.49E-78 T 15-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 AM378_04700 87dba9e88c4655ff9a892c9ba3c5712d 1029 SUPERFAMILY SSF49303 598 699 4.8E-16 T 15-10-2018 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily AM378_04700 87dba9e88c4655ff9a892c9ba3c5712d 1029 PRINTS PR00132 Glycosyl hydrolase family 2 signature 330 344 9.9E-33 T 15-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 AM378_04700 87dba9e88c4655ff9a892c9ba3c5712d 1029 PRINTS PR00132 Glycosyl hydrolase family 2 signature 361 379 9.9E-33 T 15-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 AM378_04700 87dba9e88c4655ff9a892c9ba3c5712d 1029 PRINTS PR00132 Glycosyl hydrolase family 2 signature 507 522 9.9E-33 T 15-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 AM378_04700 87dba9e88c4655ff9a892c9ba3c5712d 1029 PRINTS PR00132 Glycosyl hydrolase family 2 signature 436 451 9.9E-33 T 15-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 AM378_04700 87dba9e88c4655ff9a892c9ba3c5712d 1029 PRINTS PR00132 Glycosyl hydrolase family 2 signature 135 150 9.9E-33 T 15-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 AM378_04700 87dba9e88c4655ff9a892c9ba3c5712d 1029 Gene3D G3DSA:3.20.20.80 320 600 2.7E-102 T 15-10-2018 AM378_04700 87dba9e88c4655ff9a892c9ba3c5712d 1029 Pfam PF02837 Glycosyl hydrolases family 2, sugar binding domain 42 204 9.0E-49 T 15-10-2018 IPR006104 Glycosyl hydrolases family 2, sugar binding domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 AM378_04700 87dba9e88c4655ff9a892c9ba3c5712d 1029 Gene3D G3DSA:2.60.40.10 208 319 1.0E-20 T 15-10-2018 IPR013783 Immunoglobulin-like fold AM378_04700 87dba9e88c4655ff9a892c9ba3c5712d 1029 Pfam PF00703 Glycosyl hydrolases family 2 209 319 5.0E-10 T 15-10-2018 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 AM378_04700 87dba9e88c4655ff9a892c9ba3c5712d 1029 Gene3D G3DSA:2.70.98.10 731 1001 1.9E-71 T 15-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 AM378_04700 87dba9e88c4655ff9a892c9ba3c5712d 1029 Gene3D G3DSA:2.60.120.260 1 207 4.1E-74 T 15-10-2018 IPR008979 Galactose-binding-like domain superfamily AM378_04700 87dba9e88c4655ff9a892c9ba3c5712d 1029 SUPERFAMILY SSF49785 2 205 4.96E-60 T 15-10-2018 IPR008979 Galactose-binding-like domain superfamily AM378_04700 87dba9e88c4655ff9a892c9ba3c5712d 1029 SMART SM01038 727 998 1.2E-105 T 15-10-2018 IPR004199 Beta galactosidase small chain/ domain 5 GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 AM378_04700 87dba9e88c4655ff9a892c9ba3c5712d 1029 SUPERFAMILY SSF49303 209 319 8.99E-20 T 15-10-2018 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily AM378_04700 87dba9e88c4655ff9a892c9ba3c5712d 1029 ProSitePatterns PS00608 Glycosyl hydrolases family 2 acid/base catalyst. 436 450 - T 15-10-2018 IPR023232 Glycoside hydrolase, family 2, active site KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 AM378_04700 87dba9e88c4655ff9a892c9ba3c5712d 1029 SUPERFAMILY SSF51445 321 598 2.0E-84 T 15-10-2018 IPR017853 Glycoside hydrolase superfamily AM378_04700 87dba9e88c4655ff9a892c9ba3c5712d 1029 Pfam PF16353 Domain of unknown function(DUF4981) 615 698 7.2E-12 T 15-10-2018 IPR032312 Beta-galactosidase, domain 4 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 AM378_04700 87dba9e88c4655ff9a892c9ba3c5712d 1029 Pfam PF02929 Beta galactosidase small chain 729 997 1.3E-59 T 15-10-2018 IPR004199 Beta galactosidase small chain/ domain 5 GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 AM378_04700 87dba9e88c4655ff9a892c9ba3c5712d 1029 ProSitePatterns PS00719 Glycosyl hydrolases family 2 signature 1. 371 396 - T 15-10-2018 IPR023230 Glycoside hydrolase, family 2, conserved site KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 AM378_04700 87dba9e88c4655ff9a892c9ba3c5712d 1029 Pfam PF02836 Glycosyl hydrolases family 2, TIM barrel domain 321 603 1.2E-111 T 15-10-2018 IPR006103 Glycoside hydrolase family 2, catalytic domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-6798695 AM378_04700 87dba9e88c4655ff9a892c9ba3c5712d 1029 Gene3D G3DSA:2.60.40.10 602 705 2.3E-14 T 15-10-2018 IPR013783 Immunoglobulin-like fold AM378_17770 d353848c8aeba4dfa706d8f1db0917c9 427 Gene3D G3DSA:3.20.20.140 58 365 3.2E-183 T 15-10-2018 AM378_17770 d353848c8aeba4dfa706d8f1db0917c9 427 SUPERFAMILY SSF51338 7 60 8.64E-6 T 15-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 AM378_17770 d353848c8aeba4dfa706d8f1db0917c9 427 Gene3D G3DSA:2.30.40.10 11 411 3.2E-183 T 15-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 AM378_17770 d353848c8aeba4dfa706d8f1db0917c9 427 Pfam PF07969 Amidohydrolase family 45 405 4.7E-56 T 15-10-2018 IPR013108 Amidohydrolase 3 AM378_17770 d353848c8aeba4dfa706d8f1db0917c9 427 SUPERFAMILY SSF51556 58 376 1.13E-106 T 15-10-2018 IPR032466 Metal-dependent hydrolase AM378_09720 b47d517ab66daeca5fcfa3a4634405a0 225 Gene3D G3DSA:2.60.40.4070 101 191 2.3E-34 T 15-10-2018 AM378_09720 b47d517ab66daeca5fcfa3a4634405a0 225 Pfam PF03963 Flagellar hook capping protein - N-terminal region 5 76 1.3E-22 T 15-10-2018 IPR005648 Flagellar hook capping protein AM378_09720 b47d517ab66daeca5fcfa3a4634405a0 225 Pfam PF13861 FlgD Tudor-like domain 84 222 1.9E-15 T 15-10-2018 IPR025963 FlgD Tudor-like domain AM378_09720 b47d517ab66daeca5fcfa3a4634405a0 225 Pfam PF13860 FlgD Ig-like domain 114 181 7.5E-23 T 15-10-2018 IPR025965 FlgD Ig-like domain AM378_09720 b47d517ab66daeca5fcfa3a4634405a0 225 Gene3D G3DSA:2.30.30.910 85 219 2.3E-34 T 15-10-2018 AM378_05980 ac4185f8448f2fe5d7558e363a7612e9 187 Gene3D G3DSA:2.60.120.10 93 187 5.7E-30 T 15-10-2018 IPR014710 RmlC-like jelly roll fold AM378_05980 ac4185f8448f2fe5d7558e363a7612e9 187 Pfam PF07883 Cupin domain 112 180 8.1E-14 T 15-10-2018 IPR013096 Cupin 2, conserved barrel AM378_05980 ac4185f8448f2fe5d7558e363a7612e9 187 Pfam PF01381 Helix-turn-helix 12 63 2.2E-15 T 15-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM378_05980 ac4185f8448f2fe5d7558e363a7612e9 187 Gene3D G3DSA:1.10.260.40 2 79 4.8E-19 T 15-10-2018 AM378_05980 ac4185f8448f2fe5d7558e363a7612e9 187 SUPERFAMILY SSF47413 7 69 3.22E-17 T 15-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AM378_05980 ac4185f8448f2fe5d7558e363a7612e9 187 SUPERFAMILY SSF51182 51 185 5.71E-28 T 15-10-2018 IPR011051 RmlC-like cupin domain superfamily AM378_05980 ac4185f8448f2fe5d7558e363a7612e9 187 SMART SM00530 11 66 1.6E-14 T 15-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM378_23445 f8c84f0ca58da4cdd323b4a757f6752f 251 SMART SM00849 11 165 2.8E-37 T 15-10-2018 IPR001279 Metallo-beta-lactamase AM378_23445 f8c84f0ca58da4cdd323b4a757f6752f 251 Hamap MF_01374 Hydroxyacylglutathione hydrolase [gloB]. 1 251 45.82 T 15-10-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 AM378_23445 f8c84f0ca58da4cdd323b4a757f6752f 251 Pfam PF00753 Metallo-beta-lactamase superfamily 13 165 3.2E-18 T 15-10-2018 IPR001279 Metallo-beta-lactamase AM378_23445 f8c84f0ca58da4cdd323b4a757f6752f 251 Pfam PF16123 Hydroxyacylglutathione hydrolase C-terminus 166 251 1.6E-24 T 15-10-2018 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 AM378_23445 f8c84f0ca58da4cdd323b4a757f6752f 251 PIRSF PIRSF005457 1 251 1.0E-88 T 15-10-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 AM378_23445 f8c84f0ca58da4cdd323b4a757f6752f 251 SUPERFAMILY SSF56281 1 250 4.32E-69 T 15-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AM378_23445 f8c84f0ca58da4cdd323b4a757f6752f 251 TIGRFAM TIGR03413 GSH_gloB: hydroxyacylglutathione hydrolase 4 251 1.2E-102 T 15-10-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 AM378_23445 f8c84f0ca58da4cdd323b4a757f6752f 251 Gene3D G3DSA:3.60.15.10 1 251 6.0E-96 T 15-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AM378_03810 0bee0ca8a4114dbaae565f148a50048c 203 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 171 183 4.4E-5 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM378_03810 0bee0ca8a4114dbaae565f148a50048c 203 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 141 155 4.4E-5 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM378_03810 0bee0ca8a4114dbaae565f148a50048c 203 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 155 171 4.4E-5 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM378_03810 0bee0ca8a4114dbaae565f148a50048c 203 SMART SM00421 138 195 1.7E-5 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM378_03810 0bee0ca8a4114dbaae565f148a50048c 203 SUPERFAMILY SSF46894 134 190 6.8E-12 T 15-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AM378_03810 0bee0ca8a4114dbaae565f148a50048c 203 Gene3D G3DSA:1.10.10.10 108 196 8.5E-11 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_03810 0bee0ca8a4114dbaae565f148a50048c 203 Pfam PF00196 Bacterial regulatory proteins, luxR family 141 190 2.5E-9 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM378_05035 211aef11811913136afc6aabbf4e65e4 417 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 304 323 - T 15-10-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 AM378_05035 211aef11811913136afc6aabbf4e65e4 417 TIGRFAM TIGR00183 prok_nadp_idh: isocitrate dehydrogenase, NADP-dependent 1 417 1.1E-235 T 15-10-2018 IPR004439 Isocitrate dehydrogenase NADP-dependent, dimeric, prokaryotic GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 AM378_05035 211aef11811913136afc6aabbf4e65e4 417 SUPERFAMILY SSF53659 4 417 6.91E-149 T 15-10-2018 AM378_05035 211aef11811913136afc6aabbf4e65e4 417 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 30 413 1.4E-117 T 15-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 AM378_05035 211aef11811913136afc6aabbf4e65e4 417 Gene3D G3DSA:3.40.718.10 1 417 7.1E-186 T 15-10-2018 AM378_05035 211aef11811913136afc6aabbf4e65e4 417 SMART SM01329 29 413 1.7E-179 T 15-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 AM378_04365 a04b69e8440a413c00a3964bd8a9d327 341 Hamap MF_02065 Endolytic murein transglycosylase [mltG]. 11 333 33.527 T 15-10-2018 IPR003770 Endolytic murein transglycosylase AM378_04365 a04b69e8440a413c00a3964bd8a9d327 341 Gene3D G3DSA:3.30.160.60 72 110 4.2E-23 T 15-10-2018 AM378_04365 a04b69e8440a413c00a3964bd8a9d327 341 Pfam PF02618 YceG-like family 45 329 3.7E-82 T 15-10-2018 IPR003770 Endolytic murein transglycosylase AM378_04365 a04b69e8440a413c00a3964bd8a9d327 341 TIGRFAM TIGR00247 TIGR00247: conserved hypothetical protein, YceG family 2 338 7.2E-120 T 15-10-2018 IPR003770 Endolytic murein transglycosylase AM378_04365 a04b69e8440a413c00a3964bd8a9d327 341 Gene3D G3DSA:3.30.160.60 303 341 9.3E-21 T 15-10-2018 AM378_22380 0eecf85520212bf90df6efbc5a434dc7 303 Gene3D G3DSA:3.40.190.290 94 290 5.8E-62 T 15-10-2018 AM378_22380 0eecf85520212bf90df6efbc5a434dc7 303 SUPERFAMILY SSF53850 90 290 9.77E-45 T 15-10-2018 AM378_22380 0eecf85520212bf90df6efbc5a434dc7 303 Pfam PF03466 LysR substrate binding domain 90 290 7.6E-45 T 15-10-2018 IPR005119 LysR, substrate-binding AM378_22380 0eecf85520212bf90df6efbc5a434dc7 303 SUPERFAMILY SSF46785 6 90 4.58E-22 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM378_22380 0eecf85520212bf90df6efbc5a434dc7 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 6.5E-5 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_22380 0eecf85520212bf90df6efbc5a434dc7 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 6.5E-5 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_22380 0eecf85520212bf90df6efbc5a434dc7 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 6.5E-5 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_22380 0eecf85520212bf90df6efbc5a434dc7 303 Gene3D G3DSA:1.10.10.10 4 93 1.6E-28 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_22380 0eecf85520212bf90df6efbc5a434dc7 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 65 8.5E-20 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_17710 8a6153c061779e91b2320262c7ff36cb 191 PRINTS PR00097 Anthranilate synthase component II signature 119 131 5.5E-37 T 15-10-2018 AM378_17710 8a6153c061779e91b2320262c7ff36cb 191 PRINTS PR00097 Anthranilate synthase component II signature 47 56 5.5E-37 T 15-10-2018 AM378_17710 8a6153c061779e91b2320262c7ff36cb 191 PRINTS PR00097 Anthranilate synthase component II signature 168 181 5.5E-37 T 15-10-2018 AM378_17710 8a6153c061779e91b2320262c7ff36cb 191 PRINTS PR00097 Anthranilate synthase component II signature 2 16 5.5E-37 T 15-10-2018 AM378_17710 8a6153c061779e91b2320262c7ff36cb 191 PRINTS PR00097 Anthranilate synthase component II signature 74 85 5.5E-37 T 15-10-2018 AM378_17710 8a6153c061779e91b2320262c7ff36cb 191 PRINTS PR00097 Anthranilate synthase component II signature 99 107 5.5E-37 T 15-10-2018 AM378_17710 8a6153c061779e91b2320262c7ff36cb 191 PRINTS PR00096 Glutamine amidotransferase superfamily signature 74 85 7.9E-14 T 15-10-2018 AM378_17710 8a6153c061779e91b2320262c7ff36cb 191 PRINTS PR00096 Glutamine amidotransferase superfamily signature 168 181 7.9E-14 T 15-10-2018 AM378_17710 8a6153c061779e91b2320262c7ff36cb 191 PRINTS PR00096 Glutamine amidotransferase superfamily signature 47 56 7.9E-14 T 15-10-2018 AM378_17710 8a6153c061779e91b2320262c7ff36cb 191 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 1 191 7.7E-96 T 15-10-2018 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AM378_17710 8a6153c061779e91b2320262c7ff36cb 191 SUPERFAMILY SSF52317 1 190 3.11E-53 T 15-10-2018 IPR029062 Class I glutamine amidotransferase-like AM378_17710 8a6153c061779e91b2320262c7ff36cb 191 Pfam PF00117 Glutamine amidotransferase class-I 3 189 9.8E-54 T 15-10-2018 IPR017926 Glutamine amidotransferase AM378_17710 8a6153c061779e91b2320262c7ff36cb 191 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 44 58 9.2E-6 T 15-10-2018 AM378_17710 8a6153c061779e91b2320262c7ff36cb 191 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 74 90 9.2E-6 T 15-10-2018 AM378_17710 8a6153c061779e91b2320262c7ff36cb 191 Gene3D G3DSA:3.40.50.880 1 191 1.7E-59 T 15-10-2018 IPR029062 Class I glutamine amidotransferase-like AM378_23505 f48a4ab76916069387a9fabecea26a00 204 TIGRFAM TIGR03328 salvage_mtnB: methylthioribulose-1-phosphate dehydratase 11 199 3.9E-71 T 15-10-2018 IPR017714 Methylthioribulose-1-phosphate dehydratase GO:0005737|GO:0019509|GO:0046872 KEGG: 00270+4.2.1.109|MetaCyc: PWY-4361|Reactome: R-HSA-1237112 AM378_23505 f48a4ab76916069387a9fabecea26a00 204 SUPERFAMILY SSF53639 3 200 5.3E-46 T 15-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily AM378_23505 f48a4ab76916069387a9fabecea26a00 204 Hamap MF_01677 Methylthioribulose-1-phosphate dehydratase [mtnB]. 1 204 121.241 T 15-10-2018 IPR017714 Methylthioribulose-1-phosphate dehydratase GO:0005737|GO:0019509|GO:0046872 KEGG: 00270+4.2.1.109|MetaCyc: PWY-4361|Reactome: R-HSA-1237112 AM378_23505 f48a4ab76916069387a9fabecea26a00 204 Gene3D G3DSA:3.40.225.10 2 199 2.0E-50 T 15-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily AM378_23505 f48a4ab76916069387a9fabecea26a00 204 SMART SM01007 8 196 5.7E-50 T 15-10-2018 IPR001303 Class II aldolase/adducin N-terminal AM378_23505 f48a4ab76916069387a9fabecea26a00 204 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 10 195 1.2E-41 T 15-10-2018 IPR001303 Class II aldolase/adducin N-terminal AM378_13430 426f42b610dd94e67e193c7f1c24cf67 381 Gene3D G3DSA:1.20.1250.20 186 374 1.9E-37 T 15-10-2018 AM378_13430 426f42b610dd94e67e193c7f1c24cf67 381 Pfam PF12832 MFS_1 like family 8 357 6.7E-49 T 15-10-2018 IPR024989 Major facilitator superfamily associated domain AM378_13430 426f42b610dd94e67e193c7f1c24cf67 381 PIRSF PIRSF004925 1 381 4.0E-112 T 15-10-2018 IPR026032 Probable 3-phenylpropionic acid transporter AM378_13430 426f42b610dd94e67e193c7f1c24cf67 381 SUPERFAMILY SSF103473 7 372 1.18E-37 T 15-10-2018 IPR036259 MFS transporter superfamily AM378_13430 426f42b610dd94e67e193c7f1c24cf67 381 Gene3D G3DSA:1.20.1250.20 4 183 2.9E-19 T 15-10-2018 AM378_00840 3e07d8ebae7aa67345c9eb81b309deb3 379 SUPERFAMILY SSF51338 1 53 2.33E-19 T 15-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 AM378_00840 3e07d8ebae7aa67345c9eb81b309deb3 379 TIGRFAM TIGR00221 nagA: N-acetylglucosamine-6-phosphate deacetylase 1 377 4.6E-165 T 15-10-2018 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 AM378_00840 3e07d8ebae7aa67345c9eb81b309deb3 379 Gene3D G3DSA:2.30.40.10 7 376 3.1E-138 T 15-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 AM378_00840 3e07d8ebae7aa67345c9eb81b309deb3 379 Gene3D G3DSA:3.20.20.140 55 344 3.1E-138 T 15-10-2018 AM378_00840 3e07d8ebae7aa67345c9eb81b309deb3 379 Pfam PF01979 Amidohydrolase family 50 379 1.7E-41 T 15-10-2018 IPR006680 Amidohydrolase-related GO:0016787 AM378_00840 3e07d8ebae7aa67345c9eb81b309deb3 379 SUPERFAMILY SSF51556 54 350 2.61E-103 T 15-10-2018 IPR032466 Metal-dependent hydrolase AM378_00840 3e07d8ebae7aa67345c9eb81b309deb3 379 PIRSF PIRSF038994 1 379 3.4E-117 T 15-10-2018 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 AM378_14260 96c6fcfe6eb90169198a82a850d835c4 262 Gene3D G3DSA:2.160.10.10 1 196 2.3E-52 T 15-10-2018 AM378_14260 96c6fcfe6eb90169198a82a850d835c4 262 TIGRFAM TIGR01852 lipid_A_lpxA: acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase 8 260 1.5E-110 T 15-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 AM378_14260 96c6fcfe6eb90169198a82a850d835c4 262 PIRSF PIRSF000456 5 262 1.7E-108 T 15-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 AM378_14260 96c6fcfe6eb90169198a82a850d835c4 262 Hamap MF_00387 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase [lpxA]. 5 262 47.687 T 15-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 AM378_14260 96c6fcfe6eb90169198a82a850d835c4 262 Pfam PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 180 261 4.2E-30 T 15-10-2018 IPR029098 UDP N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00540+2.3.1.129 AM378_14260 96c6fcfe6eb90169198a82a850d835c4 262 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 20 48 - T 15-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 AM378_14260 96c6fcfe6eb90169198a82a850d835c4 262 Gene3D G3DSA:1.20.1180.10 197 262 1.8E-26 T 15-10-2018 IPR037157 UDP-N-acetylglucosamine O-acyltransferase, C-terminal domain superfamily KEGG: 00540+2.3.1.129 AM378_14260 96c6fcfe6eb90169198a82a850d835c4 262 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 153 181 - T 15-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 AM378_14260 96c6fcfe6eb90169198a82a850d835c4 262 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 17 52 9.9E-9 T 15-10-2018 IPR001451 Hexapeptide repeat AM378_14260 96c6fcfe6eb90169198a82a850d835c4 262 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 109 143 1.2E-6 T 15-10-2018 IPR001451 Hexapeptide repeat AM378_14260 96c6fcfe6eb90169198a82a850d835c4 262 SUPERFAMILY SSF51161 2 262 8.07E-79 T 15-10-2018 IPR011004 Trimeric LpxA-like superfamily AM378_13700 be8feb570d2c9df07bf3c391a3bed153 160 SUPERFAMILY SSF74982 8 138 1.57E-50 T 15-10-2018 IPR023620 Small protein B AM378_13700 be8feb570d2c9df07bf3c391a3bed153 160 Pfam PF01668 SmpB protein 14 157 1.8E-57 T 15-10-2018 IPR000037 SsrA-binding protein GO:0003723 AM378_13700 be8feb570d2c9df07bf3c391a3bed153 160 Gene3D G3DSA:2.40.280.10 7 134 2.8E-46 T 15-10-2018 IPR023620 Small protein B AM378_13700 be8feb570d2c9df07bf3c391a3bed153 160 TIGRFAM TIGR00086 smpB: SsrA-binding protein 14 156 1.3E-54 T 15-10-2018 IPR000037 SsrA-binding protein GO:0003723 AM378_13700 be8feb570d2c9df07bf3c391a3bed153 160 ProDom PD004488 SSRA-BINDING RNA-BINDING SMPB SMALL B TMRNA-BINDING SSRA 3D-STRUCTURE HOMOLOG BINDING 14 138 4.0E-55 T 15-10-2018 IPR000037 SsrA-binding protein GO:0003723 AM378_13700 be8feb570d2c9df07bf3c391a3bed153 160 ProSitePatterns PS01317 SsrA-binding protein. 32 44 - T 15-10-2018 IPR020081 SsrA-binding protein, conserved site AM378_13700 be8feb570d2c9df07bf3c391a3bed153 160 Hamap MF_00023 SsrA-binding protein [smpB]. 1 160 72.94 T 15-10-2018 IPR000037 SsrA-binding protein GO:0003723 AM378_18450 a6830cc05815e9dc956d37c6c291f7fd 664 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 233 393 1.9E-36 T 15-10-2018 IPR000160 GGDEF domain AM378_18450 a6830cc05815e9dc956d37c6c291f7fd 664 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 114 232 6.8E-15 T 15-10-2018 IPR000014 PAS domain AM378_18450 a6830cc05815e9dc956d37c6c291f7fd 664 Gene3D G3DSA:3.30.70.270 235 407 1.3E-57 T 15-10-2018 AM378_18450 a6830cc05815e9dc956d37c6c291f7fd 664 SMART SM00052 404 649 5.2E-110 T 15-10-2018 IPR001633 EAL domain AM378_18450 a6830cc05815e9dc956d37c6c291f7fd 664 SUPERFAMILY SSF55073 242 396 1.73E-47 T 15-10-2018 IPR029787 Nucleotide cyclase AM378_18450 a6830cc05815e9dc956d37c6c291f7fd 664 SUPERFAMILY SSF141868 411 658 3.4E-85 T 15-10-2018 IPR035919 EAL domain superfamily AM378_18450 a6830cc05815e9dc956d37c6c291f7fd 664 Pfam PF13426 PAS domain 122 224 4.9E-9 T 15-10-2018 IPR000014 PAS domain AM378_18450 a6830cc05815e9dc956d37c6c291f7fd 664 Pfam PF00563 EAL domain 411 644 4.9E-69 T 15-10-2018 IPR001633 EAL domain AM378_18450 a6830cc05815e9dc956d37c6c291f7fd 664 SUPERFAMILY SSF55785 123 233 2.26E-17 T 15-10-2018 IPR035965 PAS domain superfamily AM378_18450 a6830cc05815e9dc956d37c6c291f7fd 664 Gene3D G3DSA:3.20.20.450 408 661 9.2E-93 T 15-10-2018 IPR035919 EAL domain superfamily AM378_18450 a6830cc05815e9dc956d37c6c291f7fd 664 Pfam PF00990 Diguanylate cyclase, GGDEF domain 236 389 1.9E-45 T 15-10-2018 IPR000160 GGDEF domain AM378_18450 a6830cc05815e9dc956d37c6c291f7fd 664 SMART SM00091 110 176 2.9E-6 T 15-10-2018 IPR000014 PAS domain AM378_18450 a6830cc05815e9dc956d37c6c291f7fd 664 SMART SM00267 225 394 5.4E-65 T 15-10-2018 IPR000160 GGDEF domain AM378_18450 a6830cc05815e9dc956d37c6c291f7fd 664 Gene3D G3DSA:3.30.450.20 109 234 8.1E-17 T 15-10-2018 AM378_02735 a203c76f428f0161ef6540b8134ead7b 229 Pfam PF02348 Cytidylyltransferase 5 139 1.4E-27 T 15-10-2018 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|Reactome: R-HSA-4085001 AM378_02735 a203c76f428f0161ef6540b8134ead7b 229 SUPERFAMILY SSF53448 1 226 2.28E-57 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AM378_02735 a203c76f428f0161ef6540b8134ead7b 229 Gene3D G3DSA:3.90.550.10 3 227 3.4E-72 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AM378_20265 2648d60451e4b685152e423cd008ccf3 772 SUPERFAMILY SSF55008 81 144 1.44E-14 T 15-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 AM378_20265 2648d60451e4b685152e423cd008ccf3 772 Gene3D G3DSA:2.70.150.20 268 373 8.1E-31 T 15-10-2018 AM378_20265 2648d60451e4b685152e423cd008ccf3 772 SUPERFAMILY SSF56784 467 765 1.92E-53 T 15-10-2018 IPR036412 HAD-like superfamily AM378_20265 2648d60451e4b685152e423cd008ccf3 772 Gene3D G3DSA:3.40.50.1000 450 717 8.9E-83 T 15-10-2018 IPR023214 HAD superfamily AM378_20265 2648d60451e4b685152e423cd008ccf3 772 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 665 684 3.3E-29 T 15-10-2018 AM378_20265 2648d60451e4b685152e423cd008ccf3 772 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 592 603 3.3E-29 T 15-10-2018 AM378_20265 2648d60451e4b685152e423cd008ccf3 772 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 318 332 3.3E-29 T 15-10-2018 AM378_20265 2648d60451e4b685152e423cd008ccf3 772 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 614 624 3.3E-29 T 15-10-2018 AM378_20265 2648d60451e4b685152e423cd008ccf3 772 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 469 483 3.3E-29 T 15-10-2018 AM378_20265 2648d60451e4b685152e423cd008ccf3 772 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 688 700 3.3E-29 T 15-10-2018 AM378_20265 2648d60451e4b685152e423cd008ccf3 772 Pfam PF00702 haloacid dehalogenase-like hydrolase 465 677 2.8E-35 T 15-10-2018 AM378_20265 2648d60451e4b685152e423cd008ccf3 772 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 241 743 2.2E-80 T 15-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 AM378_20265 2648d60451e4b685152e423cd008ccf3 772 Gene3D G3DSA:3.40.1110.10 480 599 8.9E-83 T 15-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 AM378_20265 2648d60451e4b685152e423cd008ccf3 772 Pfam PF00122 E1-E2 ATPase 269 448 1.3E-46 T 15-10-2018 AM378_20265 2648d60451e4b685152e423cd008ccf3 772 SUPERFAMILY SSF81653 271 368 3.01E-19 T 15-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 AM378_20265 2648d60451e4b685152e423cd008ccf3 772 Gene3D G3DSA:3.30.70.100 80 147 1.2E-16 T 15-10-2018 AM378_20265 2648d60451e4b685152e423cd008ccf3 772 ProSitePatterns PS01047 Heavy-metal-associated domain. 87 116 - T 15-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 AM378_20265 2648d60451e4b685152e423cd008ccf3 772 TIGRFAM TIGR01512 ATPase-IB2_Cd: cadmium-translocating P-type ATPase 218 527 1.5E-96 T 15-10-2018 AM378_20265 2648d60451e4b685152e423cd008ccf3 772 PRINTS PR00941 Cadmium-transporting ATPase signature 85 94 1.6E-5 T 15-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 AM378_20265 2648d60451e4b685152e423cd008ccf3 772 PRINTS PR00941 Cadmium-transporting ATPase signature 253 273 1.6E-5 T 15-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 AM378_20265 2648d60451e4b685152e423cd008ccf3 772 PRINTS PR00941 Cadmium-transporting ATPase signature 96 117 1.6E-5 T 15-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 AM378_20265 2648d60451e4b685152e423cd008ccf3 772 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 218 767 2.1E-177 T 15-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 AM378_20265 2648d60451e4b685152e423cd008ccf3 772 SUPERFAMILY SSF81665 221 753 1.44E-18 T 15-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 AM378_20265 2648d60451e4b685152e423cd008ccf3 772 Pfam PF00403 Heavy-metal-associated domain 87 142 2.8E-11 T 15-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 AM378_20265 2648d60451e4b685152e423cd008ccf3 772 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 471 477 - T 15-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 AM378_04040 fd4613abc98db0c02b7285a46c5e37e9 610 Hamap MF_00203 UvrABC system protein C [uvrC]. 4 607 30.041 T 15-10-2018 IPR004791 UvrABC system, subunit C GO:0006289|GO:0009380|GO:0009381 AM378_04040 fd4613abc98db0c02b7285a46c5e37e9 610 Pfam PF01541 GIY-YIG catalytic domain 18 93 1.6E-12 T 15-10-2018 IPR000305 GIY-YIG endonuclease AM378_04040 fd4613abc98db0c02b7285a46c5e37e9 610 SUPERFAMILY SSF47781 521 609 7.94E-18 T 15-10-2018 IPR010994 RuvA domain 2-like AM378_04040 fd4613abc98db0c02b7285a46c5e37e9 610 Gene3D G3DSA:1.10.150.20 555 610 3.4E-24 T 15-10-2018 AM378_04040 fd4613abc98db0c02b7285a46c5e37e9 610 SMART SM00278 556 575 15.0 T 15-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 AM378_04040 fd4613abc98db0c02b7285a46c5e37e9 610 SMART SM00278 588 607 0.093 T 15-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 AM378_04040 fd4613abc98db0c02b7285a46c5e37e9 610 SUPERFAMILY SSF82771 17 100 1.83E-24 T 15-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 AM378_04040 fd4613abc98db0c02b7285a46c5e37e9 610 SUPERFAMILY SSF46600 190 243 3.66E-13 T 15-10-2018 IPR036876 UVR domain superfamily AM378_04040 fd4613abc98db0c02b7285a46c5e37e9 610 Gene3D G3DSA:4.10.860.10 188 241 9.7E-6 T 15-10-2018 AM378_04040 fd4613abc98db0c02b7285a46c5e37e9 610 SMART SM00465 17 98 8.1E-23 T 15-10-2018 IPR000305 GIY-YIG endonuclease AM378_04040 fd4613abc98db0c02b7285a46c5e37e9 610 Gene3D G3DSA:3.30.420.340 377 552 1.5E-46 T 15-10-2018 IPR038476 UvrC homology region 2 superfamily AM378_04040 fd4613abc98db0c02b7285a46c5e37e9 610 Pfam PF02151 UvrB/uvrC motif 205 237 1.8E-9 T 15-10-2018 IPR001943 UVR domain GO:0005515 AM378_04040 fd4613abc98db0c02b7285a46c5e37e9 610 Pfam PF08459 UvrC Helix-hairpin-helix N-terminal 385 542 1.8E-45 T 15-10-2018 IPR001162 UvrC family homology region AM378_04040 fd4613abc98db0c02b7285a46c5e37e9 610 Pfam PF14520 Helix-hairpin-helix domain 561 609 1.3E-7 T 15-10-2018 AM378_04040 fd4613abc98db0c02b7285a46c5e37e9 610 Gene3D G3DSA:3.40.1440.10 4 102 5.4E-32 T 15-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 AM378_04040 fd4613abc98db0c02b7285a46c5e37e9 610 TIGRFAM TIGR00194 uvrC: excinuclease ABC subunit C 9 589 9.3E-230 T 15-10-2018 IPR004791 UvrABC system, subunit C GO:0006289|GO:0009380|GO:0009381 AM378_06075 5c9e435b45dee3c25ac37055f6793aa5 393 Gene3D G3DSA:3.90.1150.10 32 379 1.1E-128 T 15-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AM378_06075 5c9e435b45dee3c25ac37055f6793aa5 393 TIGRFAM TIGR04350 C_S_lyase_PatB: putative C-S lyase 4 384 9.2E-116 T 15-10-2018 IPR027619 Putative C-S lyase KEGG: 00270+4.4.1.8|KEGG: 00450+4.4.1.8 AM378_06075 5c9e435b45dee3c25ac37055f6793aa5 393 Gene3D G3DSA:3.40.640.10 42 284 1.1E-128 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AM378_06075 5c9e435b45dee3c25ac37055f6793aa5 393 Pfam PF00155 Aminotransferase class I and II 30 381 1.6E-54 T 15-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AM378_06075 5c9e435b45dee3c25ac37055f6793aa5 393 SUPERFAMILY SSF53383 1 384 5.59E-87 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM378_18115 836a5cd57a428d97b49c41437cbab21b 337 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 138 239 3.3E-8 T 15-10-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 AM378_18115 836a5cd57a428d97b49c41437cbab21b 337 Gene3D G3DSA:3.30.360.10 144 266 8.6E-108 T 15-10-2018 AM378_18115 836a5cd57a428d97b49c41437cbab21b 337 SUPERFAMILY SSF51735 3 154 2.47E-40 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily AM378_18115 836a5cd57a428d97b49c41437cbab21b 337 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 3 125 4.2E-25 T 15-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 AM378_18115 836a5cd57a428d97b49c41437cbab21b 337 SUPERFAMILY SSF55347 133 295 2.09E-16 T 15-10-2018 AM378_18115 836a5cd57a428d97b49c41437cbab21b 337 Gene3D G3DSA:3.40.50.720 4 317 8.6E-108 T 15-10-2018 AM378_18115 836a5cd57a428d97b49c41437cbab21b 337 Hamap MF_01671 Inositol 2-dehydrogenase/D-chiro-inositol 3-dehydrogenase [iolG]. 1 336 51.788 T 15-10-2018 IPR023794 Inositol 2-dehydrogenase/D-chiro-inositol 3-dehydrogenase GO:0019310|GO:0050112|GO:0055114 KEGG: 00521+1.1.1.18|KEGG: 00562+1.1.1.18|MetaCyc: PWY-5940|MetaCyc: PWY-7237|MetaCyc: PWY-7241 AM378_09845 000048e5180b87cdb2679183aa3bd553 139 SUPERFAMILY SSF52402 3 138 1.34E-17 T 15-10-2018 AM378_09845 000048e5180b87cdb2679183aa3bd553 139 Gene3D G3DSA:3.40.50.620 3 139 2.3E-24 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM378_09845 000048e5180b87cdb2679183aa3bd553 139 Pfam PF00582 Universal stress protein family 2 138 7.1E-11 T 15-10-2018 IPR006016 UspA AM378_09845 000048e5180b87cdb2679183aa3bd553 139 PIRSF PIRSF006276 1 139 3.4E-37 T 15-10-2018 IPR006015 Universal stress protein A AM378_10015 e1454cc01ea1b82b497239c1ce1858d8 884 SUPERFAMILY SSF52540 565 861 2.25E-65 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_10015 e1454cc01ea1b82b497239c1ce1858d8 884 SUPERFAMILY SSF81923 17 141 4.12E-17 T 15-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 AM378_10015 e1454cc01ea1b82b497239c1ce1858d8 884 SMART SM01086 788 880 6.1E-13 T 15-10-2018 IPR019489 Clp ATPase, C-terminal AM378_10015 e1454cc01ea1b82b497239c1ce1858d8 884 Gene3D G3DSA:3.40.50.300 173 365 6.6E-64 T 15-10-2018 AM378_10015 e1454cc01ea1b82b497239c1ce1858d8 884 TIGRFAM TIGR03345 VI_ClpV1: type VI secretion ATPase, ClpV1 family 14 872 0.0 T 15-10-2018 IPR017729 Type VI secretion system, ATPase ClpV1 AM378_10015 e1454cc01ea1b82b497239c1ce1858d8 884 Gene3D G3DSA:3.40.50.300 569 786 5.6E-65 T 15-10-2018 AM378_10015 e1454cc01ea1b82b497239c1ce1858d8 884 Gene3D G3DSA:1.10.1780.10 1 161 3.1E-43 T 15-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 AM378_10015 e1454cc01ea1b82b497239c1ce1858d8 884 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 317 329 - T 15-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 AM378_10015 e1454cc01ea1b82b497239c1ce1858d8 884 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 788 863 2.8E-14 T 15-10-2018 IPR019489 Clp ATPase, C-terminal AM378_10015 e1454cc01ea1b82b497239c1ce1858d8 884 SMART SM00382 221 366 6.4E-10 T 15-10-2018 IPR003593 AAA+ ATPase domain AM378_10015 e1454cc01ea1b82b497239c1ce1858d8 884 SMART SM00382 616 759 2.4E-11 T 15-10-2018 IPR003593 AAA+ ATPase domain AM378_10015 e1454cc01ea1b82b497239c1ce1858d8 884 Gene3D G3DSA:1.10.8.60 788 884 2.4E-12 T 15-10-2018 AM378_10015 e1454cc01ea1b82b497239c1ce1858d8 884 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 226 358 1.6E-9 T 15-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AM378_10015 e1454cc01ea1b82b497239c1ce1858d8 884 Gene3D G3DSA:3.40.50.300 367 563 1.2E-44 T 15-10-2018 AM378_10015 e1454cc01ea1b82b497239c1ce1858d8 884 SUPERFAMILY SSF52540 183 516 1.3E-72 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_10015 e1454cc01ea1b82b497239c1ce1858d8 884 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 694 712 2.2E-33 T 15-10-2018 IPR001270 ClpA/B family GO:0005524 AM378_10015 e1454cc01ea1b82b497239c1ce1858d8 884 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 727 741 2.2E-33 T 15-10-2018 IPR001270 ClpA/B family GO:0005524 AM378_10015 e1454cc01ea1b82b497239c1ce1858d8 884 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 665 683 2.2E-33 T 15-10-2018 IPR001270 ClpA/B family GO:0005524 AM378_10015 e1454cc01ea1b82b497239c1ce1858d8 884 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 620 638 2.2E-33 T 15-10-2018 IPR001270 ClpA/B family GO:0005524 AM378_10015 e1454cc01ea1b82b497239c1ce1858d8 884 Pfam PF07724 AAA domain (Cdc48 subfamily) 615 780 9.6E-38 T 15-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AM378_13690 8bcb2de2501648e4f08deabbb4d4f19b 94 Gene3D G3DSA:3.10.20.280 1 88 2.2E-34 T 15-10-2018 IPR037021 RnfH superfamily AM378_13690 8bcb2de2501648e4f08deabbb4d4f19b 94 SUPERFAMILY SSF54285 4 78 4.64E-26 T 15-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp AM378_13690 8bcb2de2501648e4f08deabbb4d4f19b 94 Pfam PF03658 RnfH family Ubiquitin 4 86 1.4E-34 T 15-10-2018 IPR005346 RnfH protein AM378_13690 8bcb2de2501648e4f08deabbb4d4f19b 94 Hamap MF_00460 Protein RnfH [rnfH]. 4 94 26.207 T 15-10-2018 IPR005346 RnfH protein AM378_05150 9a9692b51c89ec72beeec6fb40fe4987 185 SMART SM00530 11 66 1.7E-13 T 15-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM378_05150 9a9692b51c89ec72beeec6fb40fe4987 185 Gene3D G3DSA:1.10.260.40 4 77 1.1E-16 T 15-10-2018 AM378_05150 9a9692b51c89ec72beeec6fb40fe4987 185 SUPERFAMILY SSF51182 51 183 3.24E-29 T 15-10-2018 IPR011051 RmlC-like cupin domain superfamily AM378_05150 9a9692b51c89ec72beeec6fb40fe4987 185 Gene3D G3DSA:2.60.120.10 86 184 9.7E-17 T 15-10-2018 IPR014710 RmlC-like jelly roll fold AM378_05150 9a9692b51c89ec72beeec6fb40fe4987 185 Pfam PF01381 Helix-turn-helix 13 64 6.2E-13 T 15-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM378_05150 9a9692b51c89ec72beeec6fb40fe4987 185 SUPERFAMILY SSF47413 6 72 5.63E-16 T 15-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AM378_05150 9a9692b51c89ec72beeec6fb40fe4987 185 Pfam PF07883 Cupin domain 111 178 9.2E-16 T 15-10-2018 IPR013096 Cupin 2, conserved barrel AM378_13605 e3e6140cadfd4b8dcbcff9a040729e82 599 Gene3D G3DSA:2.40.30.10 186 285 8.8E-35 T 15-10-2018 AM378_13605 e3e6140cadfd4b8dcbcff9a040729e82 599 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 6 170 6.8E-16 T 15-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 AM378_13605 e3e6140cadfd4b8dcbcff9a040729e82 599 Gene3D G3DSA:3.40.50.300 1 185 1.2E-69 T 15-10-2018 AM378_13605 e3e6140cadfd4b8dcbcff9a040729e82 599 Pfam PF00679 Elongation factor G C-terminus 399 482 8.0E-20 T 15-10-2018 IPR000640 Elongation factor EFG, domain V-like AM378_13605 e3e6140cadfd4b8dcbcff9a040729e82 599 PRINTS PR00315 GTP-binding elongation factor signature 90 101 4.0E-14 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM378_13605 e3e6140cadfd4b8dcbcff9a040729e82 599 PRINTS PR00315 GTP-binding elongation factor signature 126 135 4.0E-14 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM378_13605 e3e6140cadfd4b8dcbcff9a040729e82 599 PRINTS PR00315 GTP-binding elongation factor signature 6 19 4.0E-14 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM378_13605 e3e6140cadfd4b8dcbcff9a040729e82 599 PRINTS PR00315 GTP-binding elongation factor signature 74 84 4.0E-14 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM378_13605 e3e6140cadfd4b8dcbcff9a040729e82 599 PRINTS PR00315 GTP-binding elongation factor signature 49 57 4.0E-14 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM378_13605 e3e6140cadfd4b8dcbcff9a040729e82 599 Gene3D G3DSA:3.30.70.3380 368 478 3.4E-40 T 15-10-2018 AM378_13605 e3e6140cadfd4b8dcbcff9a040729e82 599 SUPERFAMILY SSF52540 2 235 1.93E-56 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_13605 e3e6140cadfd4b8dcbcff9a040729e82 599 SUPERFAMILY SSF54980 292 370 3.02E-18 T 15-10-2018 IPR035647 EF-G domain III/V-like AM378_13605 e3e6140cadfd4b8dcbcff9a040729e82 599 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 42 57 - T 15-10-2018 IPR031157 Tr-type G domain, conserved site AM378_13605 e3e6140cadfd4b8dcbcff9a040729e82 599 Pfam PF03144 Elongation factor Tu domain 2 205 275 1.3E-11 T 15-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 AM378_13605 e3e6140cadfd4b8dcbcff9a040729e82 599 Gene3D G3DSA:3.30.70.2570 479 553 4.7E-33 T 15-10-2018 IPR038363 LepA, C-terminal domain superfamily AM378_13605 e3e6140cadfd4b8dcbcff9a040729e82 599 SUPERFAMILY SSF54980 399 493 9.59E-25 T 15-10-2018 IPR035647 EF-G domain III/V-like AM378_13605 e3e6140cadfd4b8dcbcff9a040729e82 599 Gene3D G3DSA:3.30.70.870 286 367 3.3E-35 T 15-10-2018 AM378_13605 e3e6140cadfd4b8dcbcff9a040729e82 599 Hamap MF_00071 Elongation factor 4 [lepA]. 1 597 307.708 T 15-10-2018 IPR006297 Elongation factor 4 GO:0005525 AM378_13605 e3e6140cadfd4b8dcbcff9a040729e82 599 Pfam PF06421 GTP-binding protein LepA C-terminus 487 592 8.6E-49 T 15-10-2018 IPR013842 GTP-binding protein LepA, C-terminal AM378_13605 e3e6140cadfd4b8dcbcff9a040729e82 599 TIGRFAM TIGR01393 lepA: elongation factor 4 2 594 5.2E-301 T 15-10-2018 IPR006297 Elongation factor 4 GO:0005525 AM378_13605 e3e6140cadfd4b8dcbcff9a040729e82 599 Pfam PF00009 Elongation factor Tu GTP binding domain 2 181 2.2E-51 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM378_19320 336776b8c5ee94e55e73ca8ba86bf5a5 609 Gene3D G3DSA:3.40.50.10490 249 608 3.6E-155 T 15-10-2018 AM378_19320 336776b8c5ee94e55e73ca8ba86bf5a5 609 TIGRFAM TIGR01135 glmS: glutamine-fructose-6-phosphate transaminase (isomerizing) 2 609 4.9E-265 T 15-10-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 AM378_19320 336776b8c5ee94e55e73ca8ba86bf5a5 609 Pfam PF01380 SIS domain 289 418 1.0E-32 T 15-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 AM378_19320 336776b8c5ee94e55e73ca8ba86bf5a5 609 Pfam PF01380 SIS domain 462 591 3.3E-29 T 15-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 AM378_19320 336776b8c5ee94e55e73ca8ba86bf5a5 609 SUPERFAMILY SSF53697 245 609 4.64E-114 T 15-10-2018 AM378_19320 336776b8c5ee94e55e73ca8ba86bf5a5 609 Pfam PF13522 Glutamine amidotransferase domain 65 184 7.6E-21 T 15-10-2018 AM378_19320 336776b8c5ee94e55e73ca8ba86bf5a5 609 Hamap MF_00164 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] [glmS]. 1 609 41.145 T 15-10-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 AM378_19320 336776b8c5ee94e55e73ca8ba86bf5a5 609 SUPERFAMILY SSF56235 2 233 1.03E-74 T 15-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AM378_19320 336776b8c5ee94e55e73ca8ba86bf5a5 609 Gene3D G3DSA:3.60.20.10 2 241 4.4E-82 T 15-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AM378_19320 336776b8c5ee94e55e73ca8ba86bf5a5 609 Gene3D G3DSA:3.40.50.10490 447 594 3.6E-155 T 15-10-2018 AM378_09170 43a016e4464ba993f5a73d8589ab9197 726 SUPERFAMILY SSF52540 527 702 7.77E-37 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_09170 43a016e4464ba993f5a73d8589ab9197 726 Pfam PF02706 Chain length determinant protein 21 106 7.2E-14 T 15-10-2018 IPR003856 Polysaccharide chain length determinant N-terminal domain GO:0009103|GO:0016020 AM378_09170 43a016e4464ba993f5a73d8589ab9197 726 Pfam PF13614 AAA domain 540 655 1.5E-11 T 15-10-2018 IPR025669 AAA domain AM378_09170 43a016e4464ba993f5a73d8589ab9197 726 Gene3D G3DSA:3.40.50.300 440 719 1.2E-71 T 15-10-2018 AM378_09170 43a016e4464ba993f5a73d8589ab9197 726 Pfam PF13807 G-rich domain on putative tyrosine kinase 367 448 4.9E-32 T 15-10-2018 IPR032807 Tyrosine kinase, G-rich domain AM378_09170 43a016e4464ba993f5a73d8589ab9197 726 TIGRFAM TIGR01007 eps_fam: capsular exopolysaccharide family 509 712 5.3E-50 T 15-10-2018 IPR005702 Exopolysaccharide synthesis protein GO:0045226 AM378_23735 10ae24bd91c547147465f7f0bd2f4466 848 Gene3D G3DSA:3.10.20.410 37 160 1.3E-22 T 15-10-2018 AM378_23735 10ae24bd91c547147465f7f0bd2f4466 848 SUPERFAMILY SSF141729 37 159 1.1E-32 T 15-10-2018 IPR037224 PapC, N-terminal domain superfamily GO:0005515 AM378_23735 10ae24bd91c547147465f7f0bd2f4466 848 Pfam PF13954 PapC N-terminal domain 39 184 3.5E-40 T 15-10-2018 IPR025885 PapC, N-terminal domain GO:0005515 AM378_23735 10ae24bd91c547147465f7f0bd2f4466 848 Gene3D G3DSA:2.60.40.2610 664 755 1.8E-11 T 15-10-2018 AM378_23735 10ae24bd91c547147465f7f0bd2f4466 848 Gene3D G3DSA:2.60.40.3110 276 364 2.3E-29 T 15-10-2018 AM378_23735 10ae24bd91c547147465f7f0bd2f4466 848 Pfam PF00577 Outer membrane usher protein 201 750 3.0E-191 T 15-10-2018 IPR000015 Outer membrane usher protein GO:0009297|GO:0015473|GO:0016020 AM378_23735 10ae24bd91c547147465f7f0bd2f4466 848 Pfam PF13953 PapC C-terminal domain 762 817 5.0E-14 T 15-10-2018 IPR025949 PapC-like, C-terminal domain AM378_23735 10ae24bd91c547147465f7f0bd2f4466 848 Gene3D G3DSA:2.60.40.2070 759 836 6.6E-29 T 15-10-2018 AM378_23735 10ae24bd91c547147465f7f0bd2f4466 848 ProSitePatterns PS01151 Fimbrial biogenesis outer membrane usher protein signature. 318 328 - T 15-10-2018 IPR018030 Fimbrial membrane usher, conserved site AM378_16250 d49e82b4c5699c69d22fdd84a5a479c8 598 Pfam PF07669 Eco57I restriction-modification methylase 242 339 6.8E-9 T 15-10-2018 IPR011639 Restriction modification methylase Eco57I GO:0003677|GO:0003824|GO:0006304 AM378_16250 d49e82b4c5699c69d22fdd84a5a479c8 598 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 242 254 3.3E-12 T 15-10-2018 AM378_16250 d49e82b4c5699c69d22fdd84a5a479c8 598 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 125 141 3.3E-12 T 15-10-2018 AM378_16250 d49e82b4c5699c69d22fdd84a5a479c8 598 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 153 167 3.3E-12 T 15-10-2018 AM378_16250 d49e82b4c5699c69d22fdd84a5a479c8 598 SUPERFAMILY SSF53335 107 354 2.99E-42 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM378_16250 d49e82b4c5699c69d22fdd84a5a479c8 598 Gene3D G3DSA:3.40.50.150 127 361 9.7E-36 T 15-10-2018 AM378_16250 d49e82b4c5699c69d22fdd84a5a479c8 598 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 245 251 - T 15-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 AM378_05830 c13f9892420d446730968d591c37b938 201 SUPERFAMILY SSF46689 10 80 5.64E-15 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AM378_05830 c13f9892420d446730968d591c37b938 201 Pfam PF16925 Bacterial transcriptional repressor C-terminal 88 189 7.5E-11 T 15-10-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AM378_05830 c13f9892420d446730968d591c37b938 201 Pfam PF00440 Bacterial regulatory proteins, tetR family 25 60 8.6E-9 T 15-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM378_05830 c13f9892420d446730968d591c37b938 201 SUPERFAMILY SSF48498 82 197 3.06E-25 T 15-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AM378_05830 c13f9892420d446730968d591c37b938 201 Gene3D G3DSA:1.10.357.10 2 200 5.4E-62 T 15-10-2018 AM378_03425 056f3282ea66651afba539f07c0db0f5 448 SMART SM00382 50 166 2.8E-17 T 15-10-2018 IPR003593 AAA+ ATPase domain AM378_03425 056f3282ea66651afba539f07c0db0f5 448 Pfam PF16193 AAA C-terminal domain 189 268 3.4E-22 T 15-10-2018 IPR032423 AAA C-terminal domain AM378_03425 056f3282ea66651afba539f07c0db0f5 448 SUPERFAMILY SSF52540 7 239 1.35E-43 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_03425 056f3282ea66651afba539f07c0db0f5 448 Pfam PF12002 MgsA AAA+ ATPase C terminal 269 435 1.9E-65 T 15-10-2018 IPR021886 MgsA AAA+ ATPase C-terminal AM378_03425 056f3282ea66651afba539f07c0db0f5 448 Gene3D G3DSA:1.10.8.60 166 241 3.4E-27 T 15-10-2018 AM378_03425 056f3282ea66651afba539f07c0db0f5 448 Gene3D G3DSA:1.10.3710.10 347 448 2.1E-38 T 15-10-2018 AM378_03425 056f3282ea66651afba539f07c0db0f5 448 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 54 160 4.5E-15 T 15-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AM378_03425 056f3282ea66651afba539f07c0db0f5 448 Gene3D G3DSA:1.20.272.10 242 346 6.5E-43 T 15-10-2018 AM378_03425 056f3282ea66651afba539f07c0db0f5 448 SUPERFAMILY SSF48019 253 435 1.28E-71 T 15-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 AM378_03425 056f3282ea66651afba539f07c0db0f5 448 Gene3D G3DSA:3.40.50.300 2 165 1.1E-48 T 15-10-2018 AM378_20400 5a773294f6a31b1d919cf340976184a6 286 SUPERFAMILY SSF103481 198 276 3.14E-8 T 15-10-2018 AM378_20400 5a773294f6a31b1d919cf340976184a6 286 TIGRFAM TIGR00950 2A78: carboxylate/amino acid/amine transporter 11 273 2.7E-84 T 15-10-2018 IPR004779 Carboxylate/Amino Acid/Amine Transporter GO:0016021 AM378_20400 5a773294f6a31b1d919cf340976184a6 286 Pfam PF00892 EamA-like transporter family 138 274 7.8E-12 T 15-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AM378_20400 5a773294f6a31b1d919cf340976184a6 286 Pfam PF00892 EamA-like transporter family 1 129 6.1E-10 T 15-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AM378_20400 5a773294f6a31b1d919cf340976184a6 286 SUPERFAMILY SSF103481 36 132 7.32E-8 T 15-10-2018 AM378_00425 55eb729541e07b1016efc36ce4b80efc 293 Gene3D G3DSA:3.40.50.720 1 158 2.3E-54 T 15-10-2018 AM378_00425 55eb729541e07b1016efc36ce4b80efc 293 TIGRFAM TIGR01505 tartro_sem_red: 2-hydroxy-3-oxopropionate reductase 2 291 5.0E-131 T 15-10-2018 IPR006398 2-hydroxy-3-oxopropionate reductase GO:0008679|GO:0046487|GO:0055114 KEGG: 00630+1.1.1.60 AM378_00425 55eb729541e07b1016efc36ce4b80efc 293 Gene3D G3DSA:1.10.1040.10 159 292 2.3E-37 T 15-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AM378_00425 55eb729541e07b1016efc36ce4b80efc 293 PIRSF PIRSF000103 1 291 7.1E-76 T 15-10-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 AM378_00425 55eb729541e07b1016efc36ce4b80efc 293 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 163 283 6.5E-37 T 15-10-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 AM378_00425 55eb729541e07b1016efc36ce4b80efc 293 SUPERFAMILY SSF48179 162 289 3.85E-35 T 15-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 AM378_00425 55eb729541e07b1016efc36ce4b80efc 293 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 2 160 2.6E-48 T 15-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 AM378_00425 55eb729541e07b1016efc36ce4b80efc 293 SUPERFAMILY SSF51735 1 160 5.2E-44 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily AM378_22515 9eef45ac86668515f14b2fc416b5b764 374 SUPERFAMILY SSF57938 129 206 2.22E-24 T 15-10-2018 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily AM378_22515 9eef45ac86668515f14b2fc416b5b764 374 SUPERFAMILY SSF49493 110 257 2.75E-21 T 15-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 AM378_22515 9eef45ac86668515f14b2fc416b5b764 374 Hamap MF_01152 Chaperone protein DnaJ [dnaJ]. 2 368 42.89 T 15-10-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 AM378_22515 9eef45ac86668515f14b2fc416b5b764 374 Pfam PF01556 DnaJ C terminal domain 116 328 3.0E-46 T 15-10-2018 IPR002939 Chaperone DnaJ, C-terminal AM378_22515 9eef45ac86668515f14b2fc416b5b764 374 Gene3D G3DSA:2.10.230.10 140 206 8.2E-24 T 15-10-2018 AM378_22515 9eef45ac86668515f14b2fc416b5b764 374 SUPERFAMILY SSF46565 1 104 1.83E-36 T 15-10-2018 IPR036869 Chaperone J-domain superfamily AM378_22515 9eef45ac86668515f14b2fc416b5b764 374 TIGRFAM TIGR02349 DnaJ_bact: chaperone protein DnaJ 5 344 2.5E-143 T 15-10-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 AM378_22515 9eef45ac86668515f14b2fc416b5b764 374 SMART SM00271 4 61 1.1E-29 T 15-10-2018 IPR001623 DnaJ domain AM378_22515 9eef45ac86668515f14b2fc416b5b764 374 PRINTS PR00625 DnaJ domain signature 61 80 6.8E-33 T 15-10-2018 IPR001623 DnaJ domain AM378_22515 9eef45ac86668515f14b2fc416b5b764 374 PRINTS PR00625 DnaJ domain signature 25 40 6.8E-33 T 15-10-2018 IPR001623 DnaJ domain AM378_22515 9eef45ac86668515f14b2fc416b5b764 374 PRINTS PR00625 DnaJ domain signature 7 25 6.8E-33 T 15-10-2018 IPR001623 DnaJ domain AM378_22515 9eef45ac86668515f14b2fc416b5b764 374 PRINTS PR00625 DnaJ domain signature 41 61 6.8E-33 T 15-10-2018 IPR001623 DnaJ domain AM378_22515 9eef45ac86668515f14b2fc416b5b764 374 Gene3D G3DSA:2.60.260.20 251 328 4.9E-29 T 15-10-2018 AM378_22515 9eef45ac86668515f14b2fc416b5b764 374 Pfam PF00684 DnaJ central domain 142 202 3.3E-16 T 15-10-2018 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 AM378_22515 9eef45ac86668515f14b2fc416b5b764 374 ProSitePatterns PS00636 Nt-dnaJ domain signature. 46 65 - T 15-10-2018 IPR018253 DnaJ domain, conserved site AM378_22515 9eef45ac86668515f14b2fc416b5b764 374 Gene3D G3DSA:1.10.287.110 1 110 9.3E-39 T 15-10-2018 IPR036869 Chaperone J-domain superfamily AM378_22515 9eef45ac86668515f14b2fc416b5b764 374 SUPERFAMILY SSF49493 254 339 1.09E-21 T 15-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 AM378_22515 9eef45ac86668515f14b2fc416b5b764 374 Pfam PF00226 DnaJ domain 5 66 1.1E-26 T 15-10-2018 IPR001623 DnaJ domain AM378_16565 eff1a74f7d0a284112fa528736a34518 142 PIRSF PIRSF002181 1 142 5.2E-51 T 15-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 AM378_16565 eff1a74f7d0a284112fa528736a34518 142 ProSitePatterns PS00783 Ribosomal protein L13 signature. 105 127 - T 15-10-2018 IPR023563 Ribosomal protein L13, conserved site GO:0003735|GO:0005840|GO:0006412 AM378_16565 eff1a74f7d0a284112fa528736a34518 142 Pfam PF00572 Ribosomal protein L13 15 138 9.3E-57 T 15-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 AM378_16565 eff1a74f7d0a284112fa528736a34518 142 Gene3D G3DSA:3.90.1180.10 1 142 3.7E-65 T 15-10-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 AM378_16565 eff1a74f7d0a284112fa528736a34518 142 SUPERFAMILY SSF52161 1 140 1.57E-60 T 15-10-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 AM378_16565 eff1a74f7d0a284112fa528736a34518 142 TIGRFAM TIGR01066 rplM_bact: ribosomal protein uL13 4 142 1.2E-67 T 15-10-2018 IPR005823 Ribosomal protein L13, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM378_16565 eff1a74f7d0a284112fa528736a34518 142 Hamap MF_01366 50S ribosomal protein L13 [rplM]. 15 141 28.522 T 15-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 AM378_08965 5c2f3a97e69dd3721a8671ce25bab75a 79 Pfam PF10964 Protein of unknown function (DUF2766) 1 79 2.4E-48 T 15-10-2018 IPR020262 Uncharacterised protein family YecJ AM378_08965 5c2f3a97e69dd3721a8671ce25bab75a 79 ProDom PD060536 YECJ YPO1738 1 79 4.0E-33 T 15-10-2018 IPR020262 Uncharacterised protein family YecJ AM378_01060 7afde437731b3cbbf22d44a69575366c 379 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 7 362 1.6E-108 T 15-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 AM378_01060 7afde437731b3cbbf22d44a69575366c 379 TIGRFAM TIGR00203 cydB: cytochrome d ubiquinol oxidase, subunit II 1 379 2.7E-189 T 15-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 AM378_01060 7afde437731b3cbbf22d44a69575366c 379 PIRSF PIRSF000267 2 378 2.5E-129 T 15-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 AM378_07080 9422e6db9a6b5b925dcb70c7fa84bdc0 74 Pfam PF03621 MbtH-like protein 6 56 1.4E-25 T 15-10-2018 IPR005153 MbtH-like domain AM378_07080 9422e6db9a6b5b925dcb70c7fa84bdc0 74 SMART SM00923 7 57 3.8E-27 T 15-10-2018 IPR005153 MbtH-like domain AM378_07080 9422e6db9a6b5b925dcb70c7fa84bdc0 74 SUPERFAMILY SSF160582 6 70 9.55E-28 T 15-10-2018 IPR038020 MbtH-like domain superfamily AM378_07080 9422e6db9a6b5b925dcb70c7fa84bdc0 74 Gene3D G3DSA:3.90.820.10 2 74 5.0E-32 T 15-10-2018 AM378_19210 04af82a3eaf3404ca14a826ec4e4aee6 295 Gene3D G3DSA:3.40.50.2300 127 262 7.5E-99 T 15-10-2018 AM378_19210 04af82a3eaf3404ca14a826ec4e4aee6 295 SUPERFAMILY SSF53822 26 295 1.01E-86 T 15-10-2018 IPR028082 Periplasmic binding protein-like I AM378_19210 04af82a3eaf3404ca14a826ec4e4aee6 295 Pfam PF13407 Periplasmic binding protein domain 29 281 2.4E-59 T 15-10-2018 IPR025997 Periplasmic binding protein AM378_19210 04af82a3eaf3404ca14a826ec4e4aee6 295 Gene3D G3DSA:3.40.50.2300 31 281 7.5E-99 T 15-10-2018 AM378_13420 80b78a3507d9829f7831d30cb58a56a2 211 PIRSF PIRSF008159 1 211 3.1E-70 T 15-10-2018 IPR016537 Uncharacterised conserved protein UCP008159, AM378_13420 80b78a3507d9829f7831d30cb58a56a2 211 Pfam PF06226 Protein of unknown function (DUF1007) 8 210 4.1E-63 T 15-10-2018 IPR010412 Protein of unknown function DUF1007 AM378_01895 1209ba14dd21ecf36886298919260b76 236 Gene3D G3DSA:1.20.120.530 83 220 3.7E-26 T 15-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AM378_01895 1209ba14dd21ecf36886298919260b76 236 SMART SM00345 19 77 1.1E-11 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM378_01895 1209ba14dd21ecf36886298919260b76 236 Pfam PF00392 Bacterial regulatory proteins, gntR family 15 77 3.1E-15 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM378_01895 1209ba14dd21ecf36886298919260b76 236 SUPERFAMILY SSF46785 11 81 1.3E-17 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM378_01895 1209ba14dd21ecf36886298919260b76 236 Gene3D G3DSA:1.10.10.10 13 78 2.1E-17 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_01895 1209ba14dd21ecf36886298919260b76 236 SUPERFAMILY SSF48008 85 218 1.2E-24 T 15-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AM378_01895 1209ba14dd21ecf36886298919260b76 236 SMART SM00895 87 211 3.4E-16 T 15-10-2018 IPR011711 GntR, C-terminal AM378_01895 1209ba14dd21ecf36886298919260b76 236 Pfam PF07729 FCD domain 87 210 7.2E-19 T 15-10-2018 IPR011711 GntR, C-terminal AM378_19540 4c5fa709515743e6717317ee26bb22bd 158 Pfam PF13673 Acetyltransferase (GNAT) domain 54 137 9.3E-19 T 15-10-2018 IPR000182 GNAT domain AM378_19540 4c5fa709515743e6717317ee26bb22bd 158 SUPERFAMILY SSF55729 8 137 7.09E-27 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase AM378_19540 4c5fa709515743e6717317ee26bb22bd 158 Gene3D G3DSA:3.40.630.30 8 148 4.6E-34 T 15-10-2018 AM378_02655 11a70a75a7c51b3b4c7fbe3e4051c996 135 Pfam PF03788 LrgA family 23 114 2.2E-29 T 15-10-2018 IPR005538 LrgA/CidA family GO:0016021 AM378_02655 11a70a75a7c51b3b4c7fbe3e4051c996 135 Hamap MF_01144 UPF0299 membrane protein YohJ [yohJ]. 4 123 23.3 T 15-10-2018 IPR022957 Uncharacterised protein family UPF0299 AM378_12410 6052609ab0f375e065a94c346aad4d4a 395 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 193 392 4.5E-60 T 15-10-2018 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: R-HSA-83936 AM378_12410 6052609ab0f375e065a94c346aad4d4a 395 Pfam PF07670 Nucleoside recognition 92 190 1.2E-7 T 15-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 AM378_12410 6052609ab0f375e065a94c346aad4d4a 395 Pfam PF01773 Na+ dependent nucleoside transporter N-terminus 9 82 4.2E-18 T 15-10-2018 IPR002668 Concentrative nucleoside transporter N-terminal domain Reactome: R-HSA-83936 AM378_23310 425d8ef1bf03139aa3ba301b758f37b8 82 SUPERFAMILY SSF54565 1 76 1.16E-28 T 15-10-2018 IPR023803 Ribosomal protein S16 domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM378_23310 425d8ef1bf03139aa3ba301b758f37b8 82 Hamap MF_00385 30S ribosomal protein S16 [rpsP]. 1 78 23.881 T 15-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM378_23310 425d8ef1bf03139aa3ba301b758f37b8 82 Pfam PF00886 Ribosomal protein S16 8 68 8.0E-24 T 15-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM378_23310 425d8ef1bf03139aa3ba301b758f37b8 82 TIGRFAM TIGR00002 S16: ribosomal protein bS16 2 79 6.8E-29 T 15-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM378_23310 425d8ef1bf03139aa3ba301b758f37b8 82 ProSitePatterns PS00732 Ribosomal protein S16 signature. 2 11 - T 15-10-2018 IPR020592 Ribosomal protein S16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM378_23310 425d8ef1bf03139aa3ba301b758f37b8 82 Gene3D G3DSA:3.30.1320.10 1 82 7.9E-31 T 15-10-2018 IPR023803 Ribosomal protein S16 domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM378_07340 b4033e8b6c331416a5d493b17316b2a6 322 Pfam PF00892 EamA-like transporter family 3 138 8.9E-17 T 15-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AM378_07340 b4033e8b6c331416a5d493b17316b2a6 322 SUPERFAMILY SSF103481 39 143 1.31E-10 T 15-10-2018 AM378_04915 35ca70933d1cb40afb1b5e16548b0a4e 519 Pfam PF02378 Phosphotransferase system, EIIC 16 350 3.4E-57 T 15-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 AM378_04915 35ca70933d1cb40afb1b5e16548b0a4e 519 Gene3D G3DSA:3.30.1360.60 441 518 1.1E-27 T 15-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 AM378_04915 35ca70933d1cb40afb1b5e16548b0a4e 519 SUPERFAMILY SSF55604 446 516 3.27E-21 T 15-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 AM378_04915 35ca70933d1cb40afb1b5e16548b0a4e 519 Pfam PF00367 phosphotransferase system, EIIB 447 478 5.6E-15 T 15-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 AM378_04915 35ca70933d1cb40afb1b5e16548b0a4e 519 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 411 502 4.4E-22 T 15-10-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 AM378_04915 35ca70933d1cb40afb1b5e16548b0a4e 519 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 456 473 - T 15-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 AM378_21375 316680f90deca390d325c5a79db1f5c9 705 Hamap MF_01595 Polyribonucleotide nucleotidyltransferase [pnp]. 3 693 30.397 T 15-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 AM378_21375 316680f90deca390d325c5a79db1f5c9 705 SUPERFAMILY SSF55666 145 235 1.54E-30 T 15-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 AM378_21375 316680f90deca390d325c5a79db1f5c9 705 Pfam PF00575 S1 RNA binding domain 619 690 1.0E-22 T 15-10-2018 IPR003029 S1 domain GO:0003676 AM378_21375 316680f90deca390d325c5a79db1f5c9 705 SUPERFAMILY SSF54211 291 488 8.6E-47 T 15-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AM378_21375 316680f90deca390d325c5a79db1f5c9 705 SUPERFAMILY SSF54791 554 622 2.4E-17 T 15-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 AM378_21375 316680f90deca390d325c5a79db1f5c9 705 SMART SM00322 552 617 1.9E-11 T 15-10-2018 IPR004087 K Homology domain GO:0003676 AM378_21375 316680f90deca390d325c5a79db1f5c9 705 Pfam PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain 241 320 5.7E-26 T 15-10-2018 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 AM378_21375 316680f90deca390d325c5a79db1f5c9 705 Gene3D G3DSA:3.30.1370.10 550 621 6.7E-19 T 15-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 AM378_21375 316680f90deca390d325c5a79db1f5c9 705 TIGRFAM TIGR03591 polynuc_phos: polyribonucleotide nucleotidyltransferase 10 691 0.0 T 15-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 AM378_21375 316680f90deca390d325c5a79db1f5c9 705 SMART SM00316 620 690 1.5E-27 T 15-10-2018 IPR022967 RNA-binding domain, S1 AM378_21375 316680f90deca390d325c5a79db1f5c9 705 Gene3D G3DSA:3.30.230.70 236 549 6.2E-115 T 15-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 AM378_21375 316680f90deca390d325c5a79db1f5c9 705 SUPERFAMILY SSF55666 450 548 5.47E-28 T 15-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 AM378_21375 316680f90deca390d325c5a79db1f5c9 705 Pfam PF03725 3' exoribonuclease family, domain 2 460 527 2.5E-5 T 15-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 AM378_21375 316680f90deca390d325c5a79db1f5c9 705 Pfam PF03725 3' exoribonuclease family, domain 2 147 210 9.5E-14 T 15-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 AM378_21375 316680f90deca390d325c5a79db1f5c9 705 PIRSF PIRSF005499 2 704 3.4E-301 T 15-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 AM378_21375 316680f90deca390d325c5a79db1f5c9 705 SUPERFAMILY SSF54211 5 144 3.59E-49 T 15-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AM378_21375 316680f90deca390d325c5a79db1f5c9 705 Gene3D G3DSA:2.40.50.140 622 692 5.7E-29 T 15-10-2018 AM378_21375 316680f90deca390d325c5a79db1f5c9 705 Pfam PF01138 3' exoribonuclease family, domain 1 324 456 2.6E-21 T 15-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 AM378_21375 316680f90deca390d325c5a79db1f5c9 705 Pfam PF01138 3' exoribonuclease family, domain 1 16 144 1.3E-18 T 15-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 AM378_21375 316680f90deca390d325c5a79db1f5c9 705 Gene3D G3DSA:3.30.230.70 4 235 1.8E-78 T 15-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 AM378_21375 316680f90deca390d325c5a79db1f5c9 705 SUPERFAMILY SSF50249 608 692 1.34E-22 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold AM378_21375 316680f90deca390d325c5a79db1f5c9 705 Pfam PF00013 KH domain 557 614 2.4E-8 T 15-10-2018 IPR004088 K Homology domain, type 1 GO:0003723 AM378_17155 df8e40e372d99cd47e0d5a5822537cf0 369 SUPERFAMILY SSF50331 236 362 2.67E-31 T 15-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal AM378_17155 df8e40e372d99cd47e0d5a5822537cf0 369 SUPERFAMILY SSF52540 4 243 6.55E-85 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_17155 df8e40e372d99cd47e0d5a5822537cf0 369 Pfam PF00005 ABC transporter 20 161 4.5E-33 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM378_17155 df8e40e372d99cd47e0d5a5822537cf0 369 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM378_17155 df8e40e372d99cd47e0d5a5822537cf0 369 Gene3D G3DSA:2.40.50.140 292 345 2.4E-28 T 15-10-2018 AM378_17155 df8e40e372d99cd47e0d5a5822537cf0 369 SMART SM00382 28 211 1.3E-12 T 15-10-2018 IPR003593 AAA+ ATPase domain AM378_17155 df8e40e372d99cd47e0d5a5822537cf0 369 Gene3D G3DSA:2.40.50.100 239 291 2.4E-18 T 15-10-2018 AM378_17155 df8e40e372d99cd47e0d5a5822537cf0 369 Gene3D G3DSA:3.40.50.300 1 238 1.2E-74 T 15-10-2018 AM378_17155 df8e40e372d99cd47e0d5a5822537cf0 369 Pfam PF08402 TOBE domain 281 353 1.4E-11 T 15-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 AM378_21490 77aa5b2763a8a5d25906fbb10b7e57b4 189 SUPERFAMILY SSF52540 1 180 8.22E-34 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_21490 77aa5b2763a8a5d25906fbb10b7e57b4 189 TIGRFAM TIGR02322 phosphon_PhnN: phosphonate metabolism protein/1,5-bisphosphokinase (PRPP-forming) PhnN 3 177 6.9E-64 T 15-10-2018 IPR012699 Ribose 1,5-bisphosphate phosphokinase PhnN GO:0006015|GO:0033863 KEGG: 00030+2.7.4.23|MetaCyc: PWY-7805|MetaCyc: PWY-7807 AM378_21490 77aa5b2763a8a5d25906fbb10b7e57b4 189 Hamap MF_00836 Ribose 1,5-bisphosphate phosphokinase PhnN [phnN]. 1 178 34.01 T 15-10-2018 IPR012699 Ribose 1,5-bisphosphate phosphokinase PhnN GO:0006015|GO:0033863 KEGG: 00030+2.7.4.23|MetaCyc: PWY-7805|MetaCyc: PWY-7807 AM378_21490 77aa5b2763a8a5d25906fbb10b7e57b4 189 Gene3D G3DSA:3.30.63.10 34 89 6.0E-13 T 15-10-2018 AM378_21490 77aa5b2763a8a5d25906fbb10b7e57b4 189 Gene3D G3DSA:3.40.50.300 7 173 6.0E-13 T 15-10-2018 AM378_21490 77aa5b2763a8a5d25906fbb10b7e57b4 189 SMART SM00072 1 181 4.0E-7 T 15-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit AM378_16860 aaf7f8c7c804d8b8775d3e6da4d4ec78 162 TIGRFAM TIGR03426 shape_MreD: rod shape-determining protein MreD 9 154 3.5E-42 T 15-10-2018 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 AM378_16860 aaf7f8c7c804d8b8775d3e6da4d4ec78 162 Pfam PF04093 rod shape-determining protein MreD 5 154 8.7E-44 T 15-10-2018 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 AM378_16860 aaf7f8c7c804d8b8775d3e6da4d4ec78 162 PIRSF PIRSF018472 1 162 6.5E-57 T 15-10-2018 IPR026034 Cell shape-determining protein MreD, proteobacterial type AM378_01735 6b491741e4c1dfbedd882ca6ad19fe72 301 Pfam PF00892 EamA-like transporter family 7 130 5.4E-16 T 15-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AM378_01735 6b491741e4c1dfbedd882ca6ad19fe72 301 Pfam PF00892 EamA-like transporter family 146 288 1.0E-14 T 15-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AM378_01735 6b491741e4c1dfbedd882ca6ad19fe72 301 SUPERFAMILY SSF103481 208 289 8.5E-10 T 15-10-2018 AM378_01735 6b491741e4c1dfbedd882ca6ad19fe72 301 SUPERFAMILY SSF103481 40 135 8.63E-13 T 15-10-2018 AM378_17530 68a836c4bdd440254b202ac6f989a91c 201 Hamap MF_01328_B 50S ribosomal protein L4 [rplD]. 6 201 33.902 T 15-10-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM378_17530 68a836c4bdd440254b202ac6f989a91c 201 TIGRFAM TIGR03953 rplD_bact: 50S ribosomal protein uL4 13 198 1.6E-74 T 15-10-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM378_17530 68a836c4bdd440254b202ac6f989a91c 201 Pfam PF00573 Ribosomal protein L4/L1 family 13 198 4.6E-64 T 15-10-2018 IPR002136 Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 AM378_17530 68a836c4bdd440254b202ac6f989a91c 201 Gene3D G3DSA:3.40.1370.10 1 201 1.4E-68 T 15-10-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 AM378_17530 68a836c4bdd440254b202ac6f989a91c 201 SUPERFAMILY SSF52166 10 200 1.24E-72 T 15-10-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 AM378_10410 0bdf8466641a09708143eb0ad3143b87 205 Pfam PF00043 Glutathione S-transferase, C-terminal domain 121 191 2.8E-9 T 15-10-2018 IPR004046 Glutathione S-transferase, C-terminal AM378_10410 0bdf8466641a09708143eb0ad3143b87 205 Gene3D G3DSA:1.20.1050.10 85 194 2.4E-26 T 15-10-2018 AM378_10410 0bdf8466641a09708143eb0ad3143b87 205 SUPERFAMILY SSF47616 79 194 4.04E-26 T 15-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily AM378_10410 0bdf8466641a09708143eb0ad3143b87 205 Pfam PF13417 Glutathione S-transferase, N-terminal domain 6 79 2.1E-15 T 15-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AM378_10410 0bdf8466641a09708143eb0ad3143b87 205 Gene3D G3DSA:3.40.30.10 3 83 5.8E-23 T 15-10-2018 AM378_10410 0bdf8466641a09708143eb0ad3143b87 205 SUPERFAMILY SSF52833 1 85 7.48E-21 T 15-10-2018 IPR036249 Thioredoxin-like superfamily AM378_06900 0b7f711ecaaf59f0cfbed6e7a303a840 142 Gene3D G3DSA:3.40.50.620 3 140 5.6E-13 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM378_06900 0b7f711ecaaf59f0cfbed6e7a303a840 142 SUPERFAMILY SSF52402 4 136 1.47E-9 T 15-10-2018 AM378_20025 da81b7a6b315e7a326f252ef955d1464 243 TIGRFAM TIGR02382 wecD_rffC: TDP-D-fucosamine acetyltransferase 44 237 4.1E-85 T 15-10-2018 IPR012752 dTDP-fucosamine acetyltransferase WecD GO:0008080|GO:0009246 MetaCyc: PWY-7315 AM378_20025 da81b7a6b315e7a326f252ef955d1464 243 Pfam PF00583 Acetyltransferase (GNAT) family 141 225 1.1E-11 T 15-10-2018 IPR000182 GNAT domain AM378_20025 da81b7a6b315e7a326f252ef955d1464 243 SUPERFAMILY SSF55729 47 233 2.74E-28 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase AM378_20025 da81b7a6b315e7a326f252ef955d1464 243 Hamap MF_02027 dTDP-fucosamine acetyltransferase [wecD]. 44 237 44.218 T 15-10-2018 IPR012752 dTDP-fucosamine acetyltransferase WecD GO:0008080|GO:0009246 MetaCyc: PWY-7315 AM378_20025 da81b7a6b315e7a326f252ef955d1464 243 Gene3D G3DSA:3.40.630.30 1 237 4.0E-68 T 15-10-2018 AM378_06190 5d935c28d3bbf2b29b7368f5353f09e5 379 SUPERFAMILY SSF54631 255 369 3.54E-16 T 15-10-2018 AM378_06190 5d935c28d3bbf2b29b7368f5353f09e5 379 Gene3D G3DSA:3.40.50.300 1 264 5.3E-70 T 15-10-2018 AM378_06190 5d935c28d3bbf2b29b7368f5353f09e5 379 TIGRFAM TIGR01186 proV: glycine betaine/L-proline transport ATP binding subunit 20 367 1.5E-106 T 15-10-2018 IPR005892 Glycine betaine transport ATP-binding subunit GO:0005524|GO:0016020|GO:0031460 AM378_06190 5d935c28d3bbf2b29b7368f5353f09e5 379 Pfam PF00005 ABC transporter 22 168 6.1E-35 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM378_06190 5d935c28d3bbf2b29b7368f5353f09e5 379 Gene3D G3DSA:3.10.580.10 265 369 5.1E-11 T 15-10-2018 AM378_06190 5d935c28d3bbf2b29b7368f5353f09e5 379 Pfam PF00571 CBS domain 262 305 4.3E-4 T 15-10-2018 IPR000644 CBS domain AM378_06190 5d935c28d3bbf2b29b7368f5353f09e5 379 Pfam PF00571 CBS domain 322 368 3.2E-5 T 15-10-2018 IPR000644 CBS domain AM378_06190 5d935c28d3bbf2b29b7368f5353f09e5 379 SMART SM00382 31 218 8.0E-17 T 15-10-2018 IPR003593 AAA+ ATPase domain AM378_06190 5d935c28d3bbf2b29b7368f5353f09e5 379 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM378_06190 5d935c28d3bbf2b29b7368f5353f09e5 379 SMART SM00116 263 311 0.043 T 15-10-2018 IPR000644 CBS domain AM378_06190 5d935c28d3bbf2b29b7368f5353f09e5 379 SMART SM00116 322 368 23.0 T 15-10-2018 IPR000644 CBS domain AM378_06190 5d935c28d3bbf2b29b7368f5353f09e5 379 SUPERFAMILY SSF52540 1 244 6.84E-73 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_07070 7d8af1c55a6a3f4c6999f912e1817a3d 427 Pfam PF05977 Transmembrane secretion effector 16 411 4.5E-28 T 15-10-2018 IPR010290 Transmembrane secretion effector AM378_07070 7d8af1c55a6a3f4c6999f912e1817a3d 427 Gene3D G3DSA:1.20.1250.20 14 403 2.9E-36 T 15-10-2018 AM378_07070 7d8af1c55a6a3f4c6999f912e1817a3d 427 SUPERFAMILY SSF103473 18 403 8.76E-40 T 15-10-2018 IPR036259 MFS transporter superfamily AM378_11885 05bd060f44ac69bdcc5be9aec42627c8 339 SMART SM00354 12 82 5.2E-29 T 15-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM378_11885 05bd060f44ac69bdcc5be9aec42627c8 339 Gene3D G3DSA:3.40.50.2300 74 317 2.3E-62 T 15-10-2018 AM378_11885 05bd060f44ac69bdcc5be9aec42627c8 339 Pfam PF13377 Periplasmic binding protein-like domain 181 339 3.3E-27 T 15-10-2018 AM378_11885 05bd060f44ac69bdcc5be9aec42627c8 339 SUPERFAMILY SSF53822 72 339 1.99E-51 T 15-10-2018 IPR028082 Periplasmic binding protein-like I AM378_11885 05bd060f44ac69bdcc5be9aec42627c8 339 SUPERFAMILY SSF47413 12 70 1.69E-16 T 15-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AM378_11885 05bd060f44ac69bdcc5be9aec42627c8 339 Gene3D G3DSA:3.40.50.2300 168 301 2.3E-62 T 15-10-2018 AM378_11885 05bd060f44ac69bdcc5be9aec42627c8 339 ProSitePatterns PS00356 LacI-type HTH domain signature. 15 33 - T 15-10-2018 AM378_11885 05bd060f44ac69bdcc5be9aec42627c8 339 Pfam PF00356 Bacterial regulatory proteins, lacI family 14 59 1.2E-18 T 15-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM378_11885 05bd060f44ac69bdcc5be9aec42627c8 339 Gene3D G3DSA:1.10.260.40 4 70 4.1E-23 T 15-10-2018 AM378_09045 c57b57c2a1651842966ac75ecded217c 472 Pfam PF00155 Aminotransferase class I and II 146 446 4.6E-28 T 15-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AM378_09045 c57b57c2a1651842966ac75ecded217c 472 Pfam PF00392 Bacterial regulatory proteins, gntR family 4 66 1.7E-13 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM378_09045 c57b57c2a1651842966ac75ecded217c 472 Gene3D G3DSA:3.90.1150.10 96 465 2.5E-102 T 15-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AM378_09045 c57b57c2a1651842966ac75ecded217c 472 SUPERFAMILY SSF53383 93 466 6.6E-94 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM378_09045 c57b57c2a1651842966ac75ecded217c 472 SMART SM00345 7 66 5.2E-15 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM378_09045 c57b57c2a1651842966ac75ecded217c 472 Gene3D G3DSA:3.40.640.10 141 359 2.5E-102 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AM378_09045 c57b57c2a1651842966ac75ecded217c 472 Gene3D G3DSA:1.10.10.10 1 95 1.2E-18 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_09045 c57b57c2a1651842966ac75ecded217c 472 SUPERFAMILY SSF46785 1 70 2.93E-18 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM378_15240 95f5f27bb1c51d978ec7659baab4e5af 489 Gene3D G3DSA:3.40.605.10 9 474 1.6E-168 T 15-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 AM378_15240 95f5f27bb1c51d978ec7659baab4e5af 489 Pfam PF00171 Aldehyde dehydrogenase family 12 476 2.5E-168 T 15-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 AM378_15240 95f5f27bb1c51d978ec7659baab4e5af 489 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 248 255 - T 15-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 AM378_15240 95f5f27bb1c51d978ec7659baab4e5af 489 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 276 287 - T 15-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 AM378_15240 95f5f27bb1c51d978ec7659baab4e5af 489 SUPERFAMILY SSF53720 3 478 8.12E-159 T 15-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 AM378_15240 95f5f27bb1c51d978ec7659baab4e5af 489 Gene3D G3DSA:3.40.309.10 253 446 1.6E-168 T 15-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 AM378_20270 7b6f0cc38ad5ece6f9f5b53ee95b2217 487 PRINTS PR00313 NodO calcium binding signature 346 357 3.4E-12 T 15-10-2018 AM378_20270 7b6f0cc38ad5ece6f9f5b53ee95b2217 487 PRINTS PR00313 NodO calcium binding signature 367 375 3.4E-12 T 15-10-2018 AM378_20270 7b6f0cc38ad5ece6f9f5b53ee95b2217 487 PRINTS PR00313 NodO calcium binding signature 376 384 3.4E-12 T 15-10-2018 AM378_20270 7b6f0cc38ad5ece6f9f5b53ee95b2217 487 PRINTS PR00313 NodO calcium binding signature 385 394 3.4E-12 T 15-10-2018 AM378_20270 7b6f0cc38ad5ece6f9f5b53ee95b2217 487 Gene3D G3DSA:3.40.390.10 34 268 5.2E-204 T 15-10-2018 IPR024079 Metallopeptidase, catalytic domain superfamily GO:0008237 AM378_20270 7b6f0cc38ad5ece6f9f5b53ee95b2217 487 SMART SM00235 72 248 3.8E-32 T 15-10-2018 IPR006026 Peptidase, metallopeptidase GO:0006508|GO:0008237|GO:0008270 AM378_20270 7b6f0cc38ad5ece6f9f5b53ee95b2217 487 Gene3D G3DSA:2.150.10.10 269 479 5.2E-204 T 15-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal AM378_20270 7b6f0cc38ad5ece6f9f5b53ee95b2217 487 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 372 390 - T 15-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site AM378_20270 7b6f0cc38ad5ece6f9f5b53ee95b2217 487 PIRSF PIRSF001205 2 487 9.1E-232 T 15-10-2018 IPR016294 Peptidase M10B GO:0004222|GO:0005509|GO:0005615|GO:0006508|GO:0008270 AM378_20270 7b6f0cc38ad5ece6f9f5b53ee95b2217 487 Pfam PF08548 Peptidase M10 serralysin C terminal 264 487 3.2E-84 T 15-10-2018 IPR013858 Peptidase M10 serralysin, C-terminal GO:0005509|GO:0005615 AM378_20270 7b6f0cc38ad5ece6f9f5b53ee95b2217 487 SUPERFAMILY SSF55486 20 262 2.01E-84 T 15-10-2018 AM378_20270 7b6f0cc38ad5ece6f9f5b53ee95b2217 487 Pfam PF00413 Matrixin 99 206 6.0E-9 T 15-10-2018 IPR001818 Peptidase M10, metallopeptidase GO:0004222|GO:0006508|GO:0008270|GO:0031012 AM378_20270 7b6f0cc38ad5ece6f9f5b53ee95b2217 487 SUPERFAMILY SSF51120 264 485 5.49E-50 T 15-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal AM378_16055 c98741169e2253da47175d62c6b31b1a 119 TIGRFAM TIGR00525 folB: dihydroneopterin aldolase 4 114 5.4E-27 T 15-10-2018 IPR006156 Dihydroneopterin aldolase GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 AM378_16055 c98741169e2253da47175d62c6b31b1a 119 Gene3D G3DSA:3.30.1130.10 1 117 1.5E-43 T 15-10-2018 AM378_16055 c98741169e2253da47175d62c6b31b1a 119 TIGRFAM TIGR00526 folB_dom: FolB domain 1 116 1.7E-40 T 15-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 AM378_16055 c98741169e2253da47175d62c6b31b1a 119 SUPERFAMILY SSF55620 1 115 4.67E-37 T 15-10-2018 AM378_16055 c98741169e2253da47175d62c6b31b1a 119 Pfam PF02152 Dihydroneopterin aldolase 4 113 2.3E-31 T 15-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 AM378_16055 c98741169e2253da47175d62c6b31b1a 119 SMART SM00905 4 114 7.0E-48 T 15-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 AM378_12285 75845d4c3704395293c294d1d7702172 362 TIGRFAM TIGR02282 MltB: lytic murein transglycosylase B 61 354 5.2E-122 T 15-10-2018 IPR011757 Lytic transglycosylase MltB AM378_12285 75845d4c3704395293c294d1d7702172 362 Gene3D G3DSA:1.10.530.10 98 354 1.3E-117 T 15-10-2018 AM378_12285 75845d4c3704395293c294d1d7702172 362 Gene3D G3DSA:1.10.8.350 60 234 1.3E-117 T 15-10-2018 AM378_12285 75845d4c3704395293c294d1d7702172 362 SUPERFAMILY SSF53955 46 353 1.37E-99 T 15-10-2018 IPR023346 Lysozyme-like domain superfamily AM378_12285 75845d4c3704395293c294d1d7702172 362 Pfam PF13406 Transglycosylase SLT domain 56 351 1.6E-92 T 15-10-2018 IPR031304 Transglycosylase SLT domain 2 AM378_02290 b839f1af4ddb47c8b178183b8da5ac26 210 Gene3D G3DSA:3.40.225.10 4 210 7.4E-59 T 15-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily AM378_02290 b839f1af4ddb47c8b178183b8da5ac26 210 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 11 188 8.3E-42 T 15-10-2018 IPR001303 Class II aldolase/adducin N-terminal AM378_02290 b839f1af4ddb47c8b178183b8da5ac26 210 SUPERFAMILY SSF53639 1 209 7.26E-60 T 15-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily AM378_02290 b839f1af4ddb47c8b178183b8da5ac26 210 SMART SM01007 11 190 7.8E-58 T 15-10-2018 IPR001303 Class II aldolase/adducin N-terminal AM378_15585 780ee8ab6e947a91d3147ac0b98a7983 235 Hamap MF_02087 Pyridoxal phosphate homeostasis protein. 6 229 33.614 T 15-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 AM378_15585 780ee8ab6e947a91d3147ac0b98a7983 235 Gene3D G3DSA:3.20.20.10 1 235 2.1E-84 T 15-10-2018 IPR029066 PLP-binding barrel AM378_15585 780ee8ab6e947a91d3147ac0b98a7983 235 PIRSF PIRSF004848 1 235 2.0E-73 T 15-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 AM378_15585 780ee8ab6e947a91d3147ac0b98a7983 235 Pfam PF01168 Alanine racemase, N-terminal domain 7 230 5.2E-30 T 15-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AM378_15585 780ee8ab6e947a91d3147ac0b98a7983 235 TIGRFAM TIGR00044 TIGR00044: pyridoxal phosphate enzyme, YggS family 1 230 3.8E-92 T 15-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 AM378_15585 780ee8ab6e947a91d3147ac0b98a7983 235 SUPERFAMILY SSF51419 1 228 1.03E-80 T 15-10-2018 IPR029066 PLP-binding barrel AM378_15585 780ee8ab6e947a91d3147ac0b98a7983 235 ProSitePatterns PS01211 Uncharacterized protein family UPF0001 signature. 80 94 - T 15-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 AM378_05855 7d34209b56bf1033438a807e80d7fc1e 298 PRINTS PR00069 Aldo-keto reductase signature 112 130 7.2E-7 T 15-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AM378_05855 7d34209b56bf1033438a807e80d7fc1e 298 PRINTS PR00069 Aldo-keto reductase signature 143 160 7.2E-7 T 15-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AM378_05855 7d34209b56bf1033438a807e80d7fc1e 298 SUPERFAMILY SSF51430 3 295 5.63E-73 T 15-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily AM378_05855 7d34209b56bf1033438a807e80d7fc1e 298 Pfam PF00248 Aldo/keto reductase family 17 291 4.2E-60 T 15-10-2018 IPR023210 NADP-dependent oxidoreductase domain AM378_05855 7d34209b56bf1033438a807e80d7fc1e 298 Gene3D G3DSA:3.20.20.100 1 298 2.4E-110 T 15-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily AM378_17010 ad098b67d39382acd4f788ddc12e745f 176 SUPERFAMILY SSF50249 4 176 3.43E-64 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold AM378_17010 ad098b67d39382acd4f788ddc12e745f 176 Pfam PF00436 Single-strand binding protein family 6 112 9.4E-44 T 15-10-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 AM378_17010 ad098b67d39382acd4f788ddc12e745f 176 PIRSF PIRSF002070 2 171 1.5E-40 T 15-10-2018 AM378_17010 ad098b67d39382acd4f788ddc12e745f 176 Gene3D G3DSA:2.40.50.140 2 165 2.1E-52 T 15-10-2018 AM378_17010 ad098b67d39382acd4f788ddc12e745f 176 Hamap MF_00984 Single-stranded DNA-binding protein. 6 117 40.502 T 15-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 AM378_17010 ad098b67d39382acd4f788ddc12e745f 176 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 3 176 8.1E-65 T 15-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 AM378_00240 4653ee348b84b47239295c74cda6dc6c 178 Pfam PF07445 Primosomal replication protein priC 9 175 1.8E-54 T 15-10-2018 IPR010890 Primosomal replication PriB/PriC AM378_00240 4653ee348b84b47239295c74cda6dc6c 178 Gene3D G3DSA:1.20.1270.340 1 98 9.6E-33 T 15-10-2018 IPR038338 PriB/PriC superfamily AM378_15635 6ba5f7085b9a1ea855048960a775e1bc 239 Hamap MF_01057 tRNA (guanine-N(7)-)-methyltransferase [trmB]. 24 238 30.76 T 15-10-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 AM378_15635 6ba5f7085b9a1ea855048960a775e1bc 239 Gene3D G3DSA:3.40.50.150 30 239 1.6E-72 T 15-10-2018 AM378_15635 6ba5f7085b9a1ea855048960a775e1bc 239 TIGRFAM TIGR00091 TIGR00091: tRNA (guanine-N(7)-)-methyltransferase 49 238 1.2E-69 T 15-10-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 AM378_15635 6ba5f7085b9a1ea855048960a775e1bc 239 SUPERFAMILY SSF53335 17 237 5.16E-44 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM378_15635 6ba5f7085b9a1ea855048960a775e1bc 239 Pfam PF02390 Putative methyltransferase 64 233 4.2E-60 T 15-10-2018 AM378_06280 a4603ba3780568590b2d322c1804a87e 1381 Gene3D G3DSA:3.30.559.10 74 434 1.6E-91 T 15-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 AM378_06280 a4603ba3780568590b2d322c1804a87e 1381 Pfam PF00668 Condensation domain 75 505 1.9E-69 T 15-10-2018 IPR001242 Condensation domain AM378_06280 a4603ba3780568590b2d322c1804a87e 1381 ProSitePatterns PS00455 Putative AMP-binding domain signature. 665 676 - T 15-10-2018 IPR020845 AMP-binding, conserved site AM378_06280 a4603ba3780568590b2d322c1804a87e 1381 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 548 948 8.8E-107 T 15-10-2018 IPR010071 Amino acid adenylation domain AM378_06280 a4603ba3780568590b2d322c1804a87e 1381 Gene3D G3DSA:3.40.50.12780 514 918 6.7E-101 T 15-10-2018 AM378_06280 a4603ba3780568590b2d322c1804a87e 1381 SUPERFAMILY SSF52777 74 227 2.45E-27 T 15-10-2018 AM378_06280 a4603ba3780568590b2d322c1804a87e 1381 SMART SM00823 Phosphopantetheine attachment site 1037 1108 0.0058 T 15-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 AM378_06280 a4603ba3780568590b2d322c1804a87e 1381 Gene3D G3DSA:3.30.300.30 919 1023 7.5E-25 T 15-10-2018 AM378_06280 a4603ba3780568590b2d322c1804a87e 1381 Gene3D G3DSA:3.40.50.1820 1118 1379 1.6E-27 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold AM378_06280 a4603ba3780568590b2d322c1804a87e 1381 Gene3D G3DSA:3.30.559.30 247 491 1.6E-91 T 15-10-2018 AM378_06280 a4603ba3780568590b2d322c1804a87e 1381 SUPERFAMILY SSF47336 1037 1107 2.22E-10 T 15-10-2018 IPR036736 ACP-like superfamily AM378_06280 a4603ba3780568590b2d322c1804a87e 1381 Pfam PF00501 AMP-binding enzyme 528 924 2.5E-77 T 15-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 AM378_06280 a4603ba3780568590b2d322c1804a87e 1381 Gene3D G3DSA:1.10.1200.10 1024 1109 5.9E-11 T 15-10-2018 IPR036736 ACP-like superfamily AM378_06280 a4603ba3780568590b2d322c1804a87e 1381 Pfam PF13193 AMP-binding enzyme C-terminal domain 933 1011 1.4E-8 T 15-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain AM378_06280 a4603ba3780568590b2d322c1804a87e 1381 Pfam PF00550 Phosphopantetheine attachment site 1039 1104 9.3E-10 T 15-10-2018 IPR009081 Phosphopantetheine binding ACP domain AM378_06280 a4603ba3780568590b2d322c1804a87e 1381 SUPERFAMILY SSF52777 250 489 3.56E-50 T 15-10-2018 AM378_06280 a4603ba3780568590b2d322c1804a87e 1381 Pfam PF00975 Thioesterase domain 1126 1367 1.7E-14 T 15-10-2018 IPR001031 Thioesterase GO:0009058|GO:0016788 Reactome: R-HSA-75105 AM378_06280 a4603ba3780568590b2d322c1804a87e 1381 SUPERFAMILY SSF53474 1118 1373 2.34E-24 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold AM378_06280 a4603ba3780568590b2d322c1804a87e 1381 SUPERFAMILY SSF56801 515 1038 7.98E-118 T 15-10-2018 AM378_11340 d5f4aaf2c719ec973be6d84add9b614f 561 TIGRFAM TIGR01427 PTS_IIC_fructo: PTS system, Fru family, IIC component 218 551 1.2E-143 T 15-10-2018 IPR006327 Phosphotransferase system, fructose IIC component GO:0005351|GO:0008982|GO:0009401|GO:0016021 AM378_11340 d5f4aaf2c719ec973be6d84add9b614f 561 SUPERFAMILY SSF52794 104 204 2.62E-35 T 15-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 AM378_11340 d5f4aaf2c719ec973be6d84add9b614f 561 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 107 193 1.8E-18 T 15-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 AM378_11340 d5f4aaf2c719ec973be6d84add9b614f 561 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 106 189 6.1E-40 T 15-10-2018 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 KEGG: 00051+2.7.1.202 AM378_11340 d5f4aaf2c719ec973be6d84add9b614f 561 SUPERFAMILY SSF52794 5 87 3.4E-8 T 15-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 AM378_11340 d5f4aaf2c719ec973be6d84add9b614f 561 Pfam PF02378 Phosphotransferase system, EIIC 232 495 1.3E-14 T 15-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 AM378_11340 d5f4aaf2c719ec973be6d84add9b614f 561 Gene3D G3DSA:3.40.50.2300 94 205 1.1E-38 T 15-10-2018 AM378_21655 93c5e4fc2ee4c7dd89d98e60170147d8 958 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 21 638 6.5E-231 T 15-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM378_21655 93c5e4fc2ee4c7dd89d98e60170147d8 958 Pfam PF10458 Valyl tRNA synthetase tRNA binding arm 891 952 2.2E-18 T 15-10-2018 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 AM378_21655 93c5e4fc2ee4c7dd89d98e60170147d8 958 Gene3D G3DSA:1.10.287.380 884 956 1.2E-18 T 15-10-2018 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 AM378_21655 93c5e4fc2ee4c7dd89d98e60170147d8 958 SUPERFAMILY SSF52374 9 648 1.59E-135 T 15-10-2018 AM378_21655 93c5e4fc2ee4c7dd89d98e60170147d8 958 SUPERFAMILY SSF46589 891 955 1.62E-15 T 15-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 AM378_21655 93c5e4fc2ee4c7dd89d98e60170147d8 958 Gene3D G3DSA:3.40.50.620 10 203 9.0E-66 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM378_21655 93c5e4fc2ee4c7dd89d98e60170147d8 958 Pfam PF08264 Anticodon-binding domain of tRNA 681 832 1.4E-44 T 15-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 AM378_21655 93c5e4fc2ee4c7dd89d98e60170147d8 958 Gene3D G3DSA:1.10.730.10 642 823 2.8E-56 T 15-10-2018 AM378_21655 93c5e4fc2ee4c7dd89d98e60170147d8 958 PRINTS PR00986 Valyl-tRNA synthetase signature 376 389 1.3E-35 T 15-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 AM378_21655 93c5e4fc2ee4c7dd89d98e60170147d8 958 PRINTS PR00986 Valyl-tRNA synthetase signature 507 525 1.3E-35 T 15-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 AM378_21655 93c5e4fc2ee4c7dd89d98e60170147d8 958 PRINTS PR00986 Valyl-tRNA synthetase signature 476 497 1.3E-35 T 15-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 AM378_21655 93c5e4fc2ee4c7dd89d98e60170147d8 958 PRINTS PR00986 Valyl-tRNA synthetase signature 42 53 1.3E-35 T 15-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 AM378_21655 93c5e4fc2ee4c7dd89d98e60170147d8 958 PRINTS PR00986 Valyl-tRNA synthetase signature 243 260 1.3E-35 T 15-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 AM378_21655 93c5e4fc2ee4c7dd89d98e60170147d8 958 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 49 60 - T 15-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM378_21655 93c5e4fc2ee4c7dd89d98e60170147d8 958 Gene3D G3DSA:3.90.740.10 204 363 1.7E-47 T 15-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 AM378_21655 93c5e4fc2ee4c7dd89d98e60170147d8 958 TIGRFAM TIGR00422 valS: valine--tRNA ligase 10 937 0.0 T 15-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 AM378_21655 93c5e4fc2ee4c7dd89d98e60170147d8 958 SUPERFAMILY SSF50677 198 372 7.85E-56 T 15-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 AM378_21655 93c5e4fc2ee4c7dd89d98e60170147d8 958 SUPERFAMILY SSF47323 649 906 5.79E-71 T 15-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM378_21655 93c5e4fc2ee4c7dd89d98e60170147d8 958 Hamap MF_02004 Valine--tRNA ligase [valS]. 8 956 16.163 T 15-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 AM378_02125 5a657443791217a52ecb9e31c4de4dd9 144 SUPERFAMILY SSF54909 66 136 2.15E-15 T 15-10-2018 IPR011008 Dimeric alpha-beta barrel AM378_02125 5a657443791217a52ecb9e31c4de4dd9 144 Pfam PF01037 Lrp/AsnC ligand binding domain 67 131 2.0E-15 T 15-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain AM378_02125 5a657443791217a52ecb9e31c4de4dd9 144 SMART SM00344 1 107 1.3E-33 T 15-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 AM378_02125 5a657443791217a52ecb9e31c4de4dd9 144 Pfam PF13412 Winged helix-turn-helix DNA-binding 1 48 6.1E-15 T 15-10-2018 AM378_02125 5a657443791217a52ecb9e31c4de4dd9 144 Gene3D G3DSA:3.30.70.920 53 137 8.1E-19 T 15-10-2018 AM378_02125 5a657443791217a52ecb9e31c4de4dd9 144 SUPERFAMILY SSF46785 1 61 7.49E-17 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM378_02125 5a657443791217a52ecb9e31c4de4dd9 144 Gene3D G3DSA:1.10.10.10 1 52 2.3E-21 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_02125 5a657443791217a52ecb9e31c4de4dd9 144 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 1 17 4.5E-14 T 15-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 AM378_02125 5a657443791217a52ecb9e31c4de4dd9 144 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 28 47 4.5E-14 T 15-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 AM378_02125 5a657443791217a52ecb9e31c4de4dd9 144 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 17 28 4.5E-14 T 15-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 AM378_06285 819f2749d2c5847a22af6745b7a760bc 1268 Gene3D G3DSA:3.30.300.30 852 948 1.3E-13 T 15-10-2018 AM378_06285 819f2749d2c5847a22af6745b7a760bc 1268 Pfam PF00668 Condensation domain 5 413 9.2E-47 T 15-10-2018 IPR001242 Condensation domain AM378_06285 819f2749d2c5847a22af6745b7a760bc 1268 SUPERFAMILY SSF52777 9 174 9.23E-31 T 15-10-2018 AM378_06285 819f2749d2c5847a22af6745b7a760bc 1268 SUPERFAMILY SSF52777 182 417 1.89E-22 T 15-10-2018 AM378_06285 819f2749d2c5847a22af6745b7a760bc 1268 Gene3D G3DSA:3.30.559.10 6 198 1.9E-41 T 15-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 AM378_06285 819f2749d2c5847a22af6745b7a760bc 1268 Gene3D G3DSA:3.40.50.12780 438 848 8.6E-84 T 15-10-2018 AM378_06285 819f2749d2c5847a22af6745b7a760bc 1268 Gene3D G3DSA:1.10.1200.10 952 1030 3.1E-12 T 15-10-2018 IPR036736 ACP-like superfamily AM378_06285 819f2749d2c5847a22af6745b7a760bc 1268 Pfam PF00550 Phosphopantetheine attachment site 974 1022 8.8E-10 T 15-10-2018 IPR009081 Phosphopantetheine binding ACP domain AM378_06285 819f2749d2c5847a22af6745b7a760bc 1268 Pfam PF00501 AMP-binding enzyme 446 849 5.7E-60 T 15-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 AM378_06285 819f2749d2c5847a22af6745b7a760bc 1268 SUPERFAMILY SSF56801 438 972 1.96E-93 T 15-10-2018 AM378_06285 819f2749d2c5847a22af6745b7a760bc 1268 ProSitePatterns PS00455 Putative AMP-binding domain signature. 598 609 - T 15-10-2018 IPR020845 AMP-binding, conserved site AM378_06285 819f2749d2c5847a22af6745b7a760bc 1268 ProSitePatterns PS00012 Phosphopantetheine attachment site. 981 996 - T 15-10-2018 IPR006162 Phosphopantetheine attachment site AM378_06285 819f2749d2c5847a22af6745b7a760bc 1268 SUPERFAMILY SSF47336 959 1023 5.37E-11 T 15-10-2018 IPR036736 ACP-like superfamily AM378_06285 819f2749d2c5847a22af6745b7a760bc 1268 Gene3D G3DSA:3.30.559.30 212 420 2.0E-27 T 15-10-2018 AM378_06285 819f2749d2c5847a22af6745b7a760bc 1268 SMART SM00823 Phosphopantetheine attachment site 961 1026 5.0E-4 T 15-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 AM378_06775 95ff9bb0f3bc93f6eb135ca3766706b0 697 SUPERFAMILY SSF141868 444 688 1.44E-64 T 15-10-2018 IPR035919 EAL domain superfamily AM378_06775 95ff9bb0f3bc93f6eb135ca3766706b0 697 Pfam PF08447 PAS fold 37 100 1.1E-9 T 15-10-2018 IPR013655 PAS fold-3 GO:0005515 AM378_06775 95ff9bb0f3bc93f6eb135ca3766706b0 697 Pfam PF00563 EAL domain 444 676 4.1E-59 T 15-10-2018 IPR001633 EAL domain AM378_06775 95ff9bb0f3bc93f6eb135ca3766706b0 697 Gene3D G3DSA:3.30.70.270 268 436 1.1E-52 T 15-10-2018 AM378_06775 95ff9bb0f3bc93f6eb135ca3766706b0 697 Pfam PF08448 PAS fold 145 254 4.5E-15 T 15-10-2018 IPR013656 PAS fold-4 AM378_06775 95ff9bb0f3bc93f6eb135ca3766706b0 697 Gene3D G3DSA:3.30.450.20 16 124 7.6E-14 T 15-10-2018 AM378_06775 95ff9bb0f3bc93f6eb135ca3766706b0 697 SUPERFAMILY SSF55785 131 251 4.01E-11 T 15-10-2018 IPR035965 PAS domain superfamily AM378_06775 95ff9bb0f3bc93f6eb135ca3766706b0 697 SUPERFAMILY SSF55073 269 426 1.88E-47 T 15-10-2018 IPR029787 Nucleotide cyclase AM378_06775 95ff9bb0f3bc93f6eb135ca3766706b0 697 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 264 425 2.1E-40 T 15-10-2018 IPR000160 GGDEF domain AM378_06775 95ff9bb0f3bc93f6eb135ca3766706b0 697 Gene3D G3DSA:3.20.20.450 441 693 4.3E-69 T 15-10-2018 IPR035919 EAL domain superfamily AM378_06775 95ff9bb0f3bc93f6eb135ca3766706b0 697 Gene3D G3DSA:3.30.450.20 134 267 6.1E-13 T 15-10-2018 AM378_06775 95ff9bb0f3bc93f6eb135ca3766706b0 697 Pfam PF00990 Diguanylate cyclase, GGDEF domain 265 419 3.7E-48 T 15-10-2018 IPR000160 GGDEF domain AM378_06775 95ff9bb0f3bc93f6eb135ca3766706b0 697 SUPERFAMILY SSF55785 37 125 1.66E-9 T 15-10-2018 IPR035965 PAS domain superfamily AM378_06775 95ff9bb0f3bc93f6eb135ca3766706b0 697 SMART SM00267 253 425 1.7E-60 T 15-10-2018 IPR000160 GGDEF domain AM378_06775 95ff9bb0f3bc93f6eb135ca3766706b0 697 SMART SM00052 435 682 2.9E-60 T 15-10-2018 IPR001633 EAL domain AM378_20565 a99cea9c905e634be605e32512f659d9 182 SUPERFAMILY SSF55729 1 170 3.66E-29 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase AM378_20565 a99cea9c905e634be605e32512f659d9 182 Gene3D G3DSA:3.40.630.30 1 172 2.7E-48 T 15-10-2018 AM378_20565 a99cea9c905e634be605e32512f659d9 182 Pfam PF13673 Acetyltransferase (GNAT) domain 48 148 1.1E-12 T 15-10-2018 IPR000182 GNAT domain AM378_07540 e7ea4f5824d3250988e2398fd2a18c5b 509 TIGRFAM TIGR00561 pntA: NAD(P)(+) transhydrogenase (AB-specific), alpha subunit 2 509 6.6E-292 T 15-10-2018 IPR026255 NAD(P) transhydrogenase, alpha subunit GO:0008746|GO:0055114|GO:1902600 KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 AM378_07540 e7ea4f5824d3250988e2398fd2a18c5b 509 Pfam PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch 426 508 5.3E-36 T 15-10-2018 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 AM378_07540 e7ea4f5824d3250988e2398fd2a18c5b 509 Gene3D G3DSA:3.40.50.720 137 318 1.2E-163 T 15-10-2018 AM378_07540 e7ea4f5824d3250988e2398fd2a18c5b 509 Gene3D G3DSA:3.40.50.720 3 365 1.2E-163 T 15-10-2018 AM378_07540 e7ea4f5824d3250988e2398fd2a18c5b 509 PIRSF PIRSF000203 1 508 3.8E-279 T 15-10-2018 IPR026255 NAD(P) transhydrogenase, alpha subunit GO:0008746|GO:0055114|GO:1902600 KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 AM378_07540 e7ea4f5824d3250988e2398fd2a18c5b 509 ProSitePatterns PS00836 Alanine dehydrogenase & pyridine nucleotide transhydrogenase signature 1. 4 30 - T 15-10-2018 IPR008142 Alanine dehydrogenase/NAD(P) transhydrogenase, conserved site-1 GO:0016491|GO:0055114 Reactome: R-HSA-71403 AM378_07540 e7ea4f5824d3250988e2398fd2a18c5b 509 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 4 137 3.0E-52 T 15-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal AM378_07540 e7ea4f5824d3250988e2398fd2a18c5b 509 SUPERFAMILY SSF51735 137 317 8.95E-38 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily AM378_07540 e7ea4f5824d3250988e2398fd2a18c5b 509 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 141 368 1.3E-75 T 15-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain AM378_07540 e7ea4f5824d3250988e2398fd2a18c5b 509 SMART SM01002 146 311 4.9E-86 T 15-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain AM378_07540 e7ea4f5824d3250988e2398fd2a18c5b 509 SUPERFAMILY SSF52283 1 168 1.62E-57 T 15-10-2018 AM378_07540 e7ea4f5824d3250988e2398fd2a18c5b 509 ProSitePatterns PS00837 Alanine dehydrogenase & pyridine nucleotide transhydrogenase signature 2. 170 195 - T 15-10-2018 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 GO:0016491|GO:0055114 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1|Reactome: R-HSA-71403 AM378_07540 e7ea4f5824d3250988e2398fd2a18c5b 509 SMART SM01003 4 137 1.7E-76 T 15-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal AM378_24020 7fcc44ed1e31977ca68846d000df0ee0 707 Gene3D G3DSA:2.170.130.10 47 171 7.2E-33 T 15-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily AM378_24020 7fcc44ed1e31977ca68846d000df0ee0 707 SUPERFAMILY SSF56935 54 707 1.17E-125 T 15-10-2018 AM378_24020 7fcc44ed1e31977ca68846d000df0ee0 707 Gene3D G3DSA:2.40.170.20 172 707 9.7E-121 T 15-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AM378_24020 7fcc44ed1e31977ca68846d000df0ee0 707 Pfam PF00593 TonB dependent receptor 235 704 7.4E-60 T 15-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel AM378_24020 7fcc44ed1e31977ca68846d000df0ee0 707 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 66 707 8.4E-110 T 15-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 AM378_24020 7fcc44ed1e31977ca68846d000df0ee0 707 Pfam PF07715 TonB-dependent Receptor Plug Domain 65 161 1.9E-17 T 15-10-2018 IPR012910 TonB-dependent receptor, plug domain AM378_15395 299e4b100544525ddc61f29785c0bd06 303 Hamap MF_01428 Glutamyl-Q tRNA(Asp) synthetase [gluQ]. 6 290 41.721 T 15-10-2018 IPR022380 Glutamyl-Q tRNA(Asp) synthetase GO:0000166|GO:0004812|GO:0006400 AM378_15395 299e4b100544525ddc61f29785c0bd06 303 PRINTS PR00987 Glutamyl-tRNA synthetase signature 23 34 2.1E-14 T 15-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 AM378_15395 299e4b100544525ddc61f29785c0bd06 303 PRINTS PR00987 Glutamyl-tRNA synthetase signature 9 21 2.1E-14 T 15-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 AM378_15395 299e4b100544525ddc61f29785c0bd06 303 PRINTS PR00987 Glutamyl-tRNA synthetase signature 186 194 2.1E-14 T 15-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 AM378_15395 299e4b100544525ddc61f29785c0bd06 303 PRINTS PR00987 Glutamyl-tRNA synthetase signature 38 51 2.1E-14 T 15-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 AM378_15395 299e4b100544525ddc61f29785c0bd06 303 PRINTS PR00987 Glutamyl-tRNA synthetase signature 170 180 2.1E-14 T 15-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 AM378_15395 299e4b100544525ddc61f29785c0bd06 303 SUPERFAMILY SSF52374 6 285 6.82E-88 T 15-10-2018 AM378_15395 299e4b100544525ddc61f29785c0bd06 303 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 9 234 4.3E-44 T 15-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 AM378_15395 299e4b100544525ddc61f29785c0bd06 303 Gene3D G3DSA:3.40.50.620 6 284 1.5E-112 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM378_15395 299e4b100544525ddc61f29785c0bd06 303 Gene3D G3DSA:3.40.50.620 81 218 1.5E-112 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM378_15395 299e4b100544525ddc61f29785c0bd06 303 TIGRFAM TIGR03838 queuosine_YadB: glutamyl-queuosine tRNA(Asp) synthetase 6 264 6.2E-111 T 15-10-2018 IPR022380 Glutamyl-Q tRNA(Asp) synthetase GO:0000166|GO:0004812|GO:0006400 AM378_17000 4d86742ba2d07cee69f35090e4c7e3ef 86 Gene3D G3DSA:3.30.1660.10 22 86 8.3E-17 T 15-10-2018 IPR025543 Dodecin-like AM378_17000 4d86742ba2d07cee69f35090e4c7e3ef 86 Pfam PF07338 Protein of unknown function (DUF1471) 35 85 1.6E-16 T 15-10-2018 IPR010854 Domain of unknown function DUF1471 AM378_17000 4d86742ba2d07cee69f35090e4c7e3ef 86 SUPERFAMILY SSF159871 3 86 2.35E-21 T 15-10-2018 IPR036275 YdgH-like superfamily AM378_15150 8de34f23b80fce169b9bb71e581e847d 232 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 63 77 - T 15-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM378_15150 8de34f23b80fce169b9bb71e581e847d 232 Pfam PF00849 RNA pseudouridylate synthase 25 179 5.2E-25 T 15-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM378_15150 8de34f23b80fce169b9bb71e581e847d 232 Gene3D G3DSA:3.30.2350.10 8 230 2.0E-60 T 15-10-2018 AM378_15150 8de34f23b80fce169b9bb71e581e847d 232 SUPERFAMILY SSF55120 17 231 1.15E-55 T 15-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM378_13385 d375bc664ffd31ad678a07d4c4f25a20 107 Pfam PF01521 Iron-sulphur cluster biosynthesis 1 103 5.5E-27 T 15-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 AM378_13385 d375bc664ffd31ad678a07d4c4f25a20 107 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 88 105 - T 15-10-2018 IPR017870 FeS cluster insertion, C-terminal, conserved site Reactome: R-HSA-1362409 AM378_13385 d375bc664ffd31ad678a07d4c4f25a20 107 Hamap MF_01429 Iron-binding protein IscA [iscA]. 1 107 39.316 T 15-10-2018 IPR011302 Iron-binding protein IscA, proteobacteria GO:0005506|GO:0051536|GO:0097428 AM378_13385 d375bc664ffd31ad678a07d4c4f25a20 107 SUPERFAMILY SSF89360 1 95 2.75E-33 T 15-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 AM378_13385 d375bc664ffd31ad678a07d4c4f25a20 107 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 3 107 3.0E-37 T 15-10-2018 IPR016092 FeS cluster insertion protein GO:0005198|GO:0051536|GO:0097428 Reactome: R-HSA-1362409 AM378_13385 d375bc664ffd31ad678a07d4c4f25a20 107 Gene3D G3DSA:2.60.300.12 2 107 1.9E-37 T 15-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 AM378_13385 d375bc664ffd31ad678a07d4c4f25a20 107 TIGRFAM TIGR02011 IscA: iron-sulfur cluster assembly protein IscA 3 107 8.5E-60 T 15-10-2018 IPR011302 Iron-binding protein IscA, proteobacteria GO:0005506|GO:0051536|GO:0097428 AM378_11980 264e33f92c0fd05285c8636486b35b36 373 SUPERFAMILY SSF51735 91 247 5.26E-33 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily AM378_11980 264e33f92c0fd05285c8636486b35b36 373 SUPERFAMILY SSF52283 12 110 3.19E-17 T 15-10-2018 AM378_11980 264e33f92c0fd05285c8636486b35b36 373 Gene3D G3DSA:3.40.50.720 3 277 1.2E-111 T 15-10-2018 AM378_11980 264e33f92c0fd05285c8636486b35b36 373 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 197 213 - T 15-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site AM378_11980 264e33f92c0fd05285c8636486b35b36 373 Gene3D G3DSA:3.40.50.720 92 257 1.2E-111 T 15-10-2018 AM378_11980 264e33f92c0fd05285c8636486b35b36 373 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 119 146 - T 15-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 AM378_11980 264e33f92c0fd05285c8636486b35b36 373 Pfam PF11890 Domain of unknown function (DUF3410) 289 369 1.5E-30 T 15-10-2018 IPR024531 Erythronate-4-phosphate dehydrogenase, dimerisation domain GO:0046983 KEGG: 00750+1.1.1.290 AM378_11980 264e33f92c0fd05285c8636486b35b36 373 Gene3D G3DSA:3.30.1370.170 293 373 4.7E-33 T 15-10-2018 IPR038251 PdxB, dimerisation domain superfamily KEGG: 00750+1.1.1.290 AM378_11980 264e33f92c0fd05285c8636486b35b36 373 Hamap MF_01825 Erythronate-4-phosphate dehydrogenase [pdxB]. 1 357 46.599 T 15-10-2018 IPR020921 Erythronate-4-phosphate dehydrogenase GO:0005737|GO:0008615|GO:0033711|GO:0055114 KEGG: 00750+1.1.1.290 AM378_11980 264e33f92c0fd05285c8636486b35b36 373 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 110 245 4.4E-30 T 15-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 AM378_11980 264e33f92c0fd05285c8636486b35b36 373 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 9 278 1.2E-16 T 15-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 AM378_08670 b36e0e621d77863065b2f9a675a77094 261 SUPERFAMILY SSF81345 3 257 4.18E-40 T 15-10-2018 IPR037294 ABC transporter, BtuC-like AM378_08670 b36e0e621d77863065b2f9a675a77094 261 Pfam PF00950 ABC 3 transport family 1 257 1.4E-84 T 15-10-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 AM378_08670 b36e0e621d77863065b2f9a675a77094 261 Gene3D G3DSA:1.10.3470.10 29 261 8.9E-11 T 15-10-2018 IPR037294 ABC transporter, BtuC-like AM378_09560 c7ed5fdcb2b7d6f8a16e91b1b2427d70 136 Gene3D G3DSA:1.20.120.340 1 128 5.8E-42 T 15-10-2018 AM378_09560 c7ed5fdcb2b7d6f8a16e91b1b2427d70 136 TIGRFAM TIGR00208 fliS: flagellar protein FliS 1 125 2.6E-39 T 15-10-2018 IPR003713 Flagellar protein FliS GO:0044780 AM378_09560 c7ed5fdcb2b7d6f8a16e91b1b2427d70 136 SUPERFAMILY SSF101116 8 130 6.28E-41 T 15-10-2018 IPR036584 Flagellar protein FliS superfamily GO:0044780 AM378_09560 c7ed5fdcb2b7d6f8a16e91b1b2427d70 136 Pfam PF02561 Flagellar protein FliS 8 125 3.1E-40 T 15-10-2018 IPR003713 Flagellar protein FliS GO:0044780 AM378_09560 c7ed5fdcb2b7d6f8a16e91b1b2427d70 136 PIRSF PIRSF039090 1 136 2.9E-45 T 15-10-2018 IPR003713 Flagellar protein FliS GO:0044780 AM378_05695 38eebd1f241fd3ff8274628dc01053ac 123 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 104 121 - T 15-10-2018 IPR017870 FeS cluster insertion, C-terminal, conserved site Reactome: R-HSA-1362409 AM378_05695 38eebd1f241fd3ff8274628dc01053ac 123 SUPERFAMILY SSF89360 19 112 2.35E-27 T 15-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 AM378_05695 38eebd1f241fd3ff8274628dc01053ac 123 Pfam PF01521 Iron-sulphur cluster biosynthesis 19 119 1.8E-18 T 15-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 AM378_05695 38eebd1f241fd3ff8274628dc01053ac 123 TIGRFAM TIGR01997 sufA_proteo: FeS assembly scaffold SufA 18 123 4.3E-42 T 15-10-2018 IPR011298 FeS assembly scaffold SufA GO:0097428 AM378_05695 38eebd1f241fd3ff8274628dc01053ac 123 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 19 122 3.7E-33 T 15-10-2018 IPR016092 FeS cluster insertion protein GO:0005198|GO:0051536|GO:0097428 Reactome: R-HSA-1362409 AM378_05695 38eebd1f241fd3ff8274628dc01053ac 123 Gene3D G3DSA:2.60.300.12 18 123 1.1E-34 T 15-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 AM378_04670 33a42ee39f0a7bc9047c16047feb84a0 271 SUPERFAMILY SSF53850 33 271 1.36E-76 T 15-10-2018 AM378_04670 33a42ee39f0a7bc9047c16047feb84a0 271 TIGRFAM TIGR00363 TIGR00363: lipoprotein, YaeC family 16 271 8.5E-124 T 15-10-2018 IPR004872 Lipoprotein NlpA family AM378_04670 33a42ee39f0a7bc9047c16047feb84a0 271 Pfam PF03180 NLPA lipoprotein 33 271 1.3E-94 T 15-10-2018 IPR004872 Lipoprotein NlpA family AM378_04670 33a42ee39f0a7bc9047c16047feb84a0 271 PIRSF PIRSF002854 1 271 5.1E-98 T 15-10-2018 IPR004872 Lipoprotein NlpA family AM378_04670 33a42ee39f0a7bc9047c16047feb84a0 271 Gene3D G3DSA:3.40.190.10 34 265 5.5E-96 T 15-10-2018 AM378_04670 33a42ee39f0a7bc9047c16047feb84a0 271 Gene3D G3DSA:3.40.190.10 115 221 5.5E-96 T 15-10-2018 AM378_20365 35b5844746590d77e1ff6a36c0c98a2f 439 ProSitePatterns PS01037 Bacterial extracellular solute-binding proteins, family 1 signature. 142 159 - T 15-10-2018 IPR006061 Solute-binding family 1, conserved site GO:0055085 AM378_20365 35b5844746590d77e1ff6a36c0c98a2f 439 Gene3D G3DSA:3.40.190.10 31 385 1.2E-164 T 15-10-2018 AM378_20365 35b5844746590d77e1ff6a36c0c98a2f 439 SUPERFAMILY SSF53850 27 427 3.42E-75 T 15-10-2018 AM378_20365 35b5844746590d77e1ff6a36c0c98a2f 439 Pfam PF13416 Bacterial extracellular solute-binding protein 46 369 5.8E-43 T 15-10-2018 IPR006059 Bacterial extracellular solute-binding protein AM378_20365 35b5844746590d77e1ff6a36c0c98a2f 439 Gene3D G3DSA:3.40.190.10 147 425 1.2E-164 T 15-10-2018 AM378_22945 52c26d689046140d3d9500debd0aa752 429 SUPERFAMILY SSF53383 5 428 3.99E-138 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM378_22945 52c26d689046140d3d9500debd0aa752 429 Gene3D G3DSA:3.40.640.10 72 320 2.9E-180 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AM378_22945 52c26d689046140d3d9500debd0aa752 429 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 237 273 - T 15-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AM378_22945 52c26d689046140d3d9500debd0aa752 429 Pfam PF00202 Aminotransferase class-III 35 399 2.8E-79 T 15-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AM378_22945 52c26d689046140d3d9500debd0aa752 429 Hamap MF_00375 Glutamate-1-semialdehyde 2,1-aminomutase [hemL]. 6 429 107.439 T 15-10-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 AM378_22945 52c26d689046140d3d9500debd0aa752 429 TIGRFAM TIGR00713 hemL: glutamate-1-semialdehyde-2,1-aminomutase 6 428 1.6E-201 T 15-10-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 AM378_22945 52c26d689046140d3d9500debd0aa752 429 Gene3D G3DSA:3.90.1150.10 10 422 2.9E-180 T 15-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AM378_20600 5130c1ece04a65479150b52a49c3c8f2 127 TIGRFAM TIGR00964 secE_bact: preprotein translocase, SecE subunit 69 123 4.1E-17 T 15-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 AM378_20600 5130c1ece04a65479150b52a49c3c8f2 127 Hamap MF_00422 Protein translocase subunit SecE [secE]. 67 121 13.188 T 15-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 AM378_20600 5130c1ece04a65479150b52a49c3c8f2 127 Pfam PF00584 SecE/Sec61-gamma subunits of protein translocation complex 70 122 3.9E-20 T 15-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 AM378_20600 5130c1ece04a65479150b52a49c3c8f2 127 Gene3D G3DSA:1.20.5.1030 66 123 4.9E-16 T 15-10-2018 IPR038379 SecE superfamily AM378_20600 5130c1ece04a65479150b52a49c3c8f2 127 PRINTS PR01650 Bacterial translocase SecE signature 44 65 6.2E-39 T 15-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 AM378_20600 5130c1ece04a65479150b52a49c3c8f2 127 PRINTS PR01650 Bacterial translocase SecE signature 65 85 6.2E-39 T 15-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 AM378_20600 5130c1ece04a65479150b52a49c3c8f2 127 PRINTS PR01650 Bacterial translocase SecE signature 109 125 6.2E-39 T 15-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 AM378_20600 5130c1ece04a65479150b52a49c3c8f2 127 PRINTS PR01650 Bacterial translocase SecE signature 89 109 6.2E-39 T 15-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 AM378_20600 5130c1ece04a65479150b52a49c3c8f2 127 ProSitePatterns PS01067 Protein secE/sec61-gamma signature. 71 99 - T 15-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 AM378_15225 36811959112a0a525e5550720cadfae1 664 ProSitePatterns PS00801 Transketolase signature 1. 12 32 - T 15-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 AM378_15225 36811959112a0a525e5550720cadfae1 664 Gene3D G3DSA:3.40.50.970 327 537 5.3E-85 T 15-10-2018 AM378_15225 36811959112a0a525e5550720cadfae1 664 SMART SM00861 355 526 1.1E-67 T 15-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain AM378_15225 36811959112a0a525e5550720cadfae1 664 Pfam PF02780 Transketolase, C-terminal domain 540 655 5.7E-20 T 15-10-2018 IPR033248 Transketolase, C-terminal domain AM378_15225 36811959112a0a525e5550720cadfae1 664 SUPERFAMILY SSF52922 533 664 9.03E-44 T 15-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 AM378_15225 36811959112a0a525e5550720cadfae1 664 Gene3D G3DSA:3.40.50.970 1 326 1.2E-135 T 15-10-2018 AM378_15225 36811959112a0a525e5550720cadfae1 664 Gene3D G3DSA:3.40.50.920 538 664 3.6E-44 T 15-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 AM378_15225 36811959112a0a525e5550720cadfae1 664 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 4 334 3.2E-170 T 15-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 AM378_15225 36811959112a0a525e5550720cadfae1 664 ProSitePatterns PS00802 Transketolase signature 2. 467 483 - T 15-10-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 AM378_15225 36811959112a0a525e5550720cadfae1 664 Pfam PF02779 Transketolase, pyrimidine binding domain 355 524 2.4E-44 T 15-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain AM378_15225 36811959112a0a525e5550720cadfae1 664 TIGRFAM TIGR00232 tktlase_bact: transketolase 5 663 0.0 T 15-10-2018 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 AM378_15225 36811959112a0a525e5550720cadfae1 664 SUPERFAMILY SSF52518 5 331 2.41E-120 T 15-10-2018 IPR029061 Thiamin diphosphate-binding fold AM378_15225 36811959112a0a525e5550720cadfae1 664 SUPERFAMILY SSF52518 335 526 2.24E-67 T 15-10-2018 IPR029061 Thiamin diphosphate-binding fold AM378_15485 721e36960263c836227d86a9a87218e8 865 Pfam PF11791 Aconitate B N-terminal domain 4 156 1.2E-67 T 15-10-2018 IPR015933 Aconitase B, HEAT-like domain GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 AM378_15485 721e36960263c836227d86a9a87218e8 865 SUPERFAMILY SSF53732 380 859 3.01E-150 T 15-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 AM378_15485 721e36960263c836227d86a9a87218e8 865 Pfam PF00330 Aconitase family (aconitate hydratase) 472 818 1.3E-38 T 15-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AM378_15485 721e36960263c836227d86a9a87218e8 865 Pfam PF06434 Aconitate hydratase 2 N-terminus 168 382 4.2E-98 T 15-10-2018 IPR015929 Aconitase B, swivel GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 AM378_15485 721e36960263c836227d86a9a87218e8 865 TIGRFAM TIGR00117 acnB: aconitate hydratase 2 1 854 0.0 T 15-10-2018 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 AM378_15485 721e36960263c836227d86a9a87218e8 865 ProSitePatterns PS00450 Aconitase family signature 1. 702 719 - T 15-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 AM378_15485 721e36960263c836227d86a9a87218e8 865 Gene3D G3DSA:1.25.40.310 1 161 5.9E-75 T 15-10-2018 IPR036288 Aconitase B, HEAT-like domain superfamily GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 AM378_15485 721e36960263c836227d86a9a87218e8 865 SUPERFAMILY SSF74778 2 160 9.15E-69 T 15-10-2018 IPR036288 Aconitase B, HEAT-like domain superfamily GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 AM378_15485 721e36960263c836227d86a9a87218e8 865 Gene3D G3DSA:3.20.19.10 162 361 6.2E-82 T 15-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 AM378_15485 721e36960263c836227d86a9a87218e8 865 SUPERFAMILY SSF52016 162 370 9.03E-73 T 15-10-2018 AM378_15485 721e36960263c836227d86a9a87218e8 865 ProSitePatterns PS01244 Aconitase family signature 2. 761 774 - T 15-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 AM378_15485 721e36960263c836227d86a9a87218e8 865 PIRSF PIRSF036687 1 859 0.0 T 15-10-2018 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 AM378_15485 721e36960263c836227d86a9a87218e8 865 Gene3D G3DSA:3.30.499.10 402 529 3.3E-154 T 15-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 AM378_15485 721e36960263c836227d86a9a87218e8 865 Gene3D G3DSA:3.30.499.10 683 865 1.5E-75 T 15-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 AM378_15485 721e36960263c836227d86a9a87218e8 865 Gene3D G3DSA:3.40.1060.10 385 681 3.3E-154 T 15-10-2018 IPR015932 Aconitase, domain 2 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3|Reactome: R-HSA-1268020|Reactome: R-HSA-71403 AM378_19040 3a0ff3b9a8920dfdc3cc2689031d3fec 703 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 26 700 3.6E-287 T 15-10-2018 IPR004811 RelA/SpoT family GO:0015969 AM378_19040 3a0ff3b9a8920dfdc3cc2689031d3fec 703 SUPERFAMILY SSF109604 3 190 1.38E-75 T 15-10-2018 AM378_19040 3a0ff3b9a8920dfdc3cc2689031d3fec 703 Gene3D G3DSA:3.30.460.10 193 325 1.4E-48 T 15-10-2018 AM378_19040 3a0ff3b9a8920dfdc3cc2689031d3fec 703 Gene3D G3DSA:1.10.3210.10 3 190 9.4E-81 T 15-10-2018 AM378_19040 3a0ff3b9a8920dfdc3cc2689031d3fec 703 Pfam PF13328 HD domain 26 175 1.2E-54 T 15-10-2018 IPR003607 HD/PDEase domain AM378_19040 3a0ff3b9a8920dfdc3cc2689031d3fec 703 Gene3D G3DSA:3.30.70.260 624 703 5.7E-13 T 15-10-2018 AM378_19040 3a0ff3b9a8920dfdc3cc2689031d3fec 703 SMART SM00471 41 153 5.9E-12 T 15-10-2018 IPR003607 HD/PDEase domain AM378_19040 3a0ff3b9a8920dfdc3cc2689031d3fec 703 SUPERFAMILY SSF55021 630 700 4.4E-5 T 15-10-2018 AM378_19040 3a0ff3b9a8920dfdc3cc2689031d3fec 703 SMART SM00954 235 345 8.0E-63 T 15-10-2018 IPR007685 RelA/SpoT GO:0015969 AM378_19040 3a0ff3b9a8920dfdc3cc2689031d3fec 703 Pfam PF02824 TGS domain 390 449 1.3E-20 T 15-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 AM378_19040 3a0ff3b9a8920dfdc3cc2689031d3fec 703 SUPERFAMILY SSF81301 192 366 1.8E-62 T 15-10-2018 AM378_19040 3a0ff3b9a8920dfdc3cc2689031d3fec 703 Gene3D G3DSA:3.10.20.30 383 457 1.5E-29 T 15-10-2018 IPR012675 Beta-grasp domain superfamily AM378_19040 3a0ff3b9a8920dfdc3cc2689031d3fec 703 Pfam PF04607 Region found in RelA / SpoT proteins 235 345 2.3E-36 T 15-10-2018 IPR007685 RelA/SpoT GO:0015969 AM378_19040 3a0ff3b9a8920dfdc3cc2689031d3fec 703 SUPERFAMILY SSF81271 377 449 8.07E-21 T 15-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 AM378_19040 3a0ff3b9a8920dfdc3cc2689031d3fec 703 Pfam PF13291 ACT domain 623 700 2.4E-15 T 15-10-2018 IPR002912 ACT domain AM378_23140 e39e818931908d6749f453a38cb4ff2a 348 Pfam PF01142 tRNA pseudouridine synthase D (TruD) 190 336 5.6E-18 T 15-10-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM378_23140 e39e818931908d6749f453a38cb4ff2a 348 Pfam PF01142 tRNA pseudouridine synthase D (TruD) 11 166 2.2E-40 T 15-10-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM378_23140 e39e818931908d6749f453a38cb4ff2a 348 ProSitePatterns PS01268 Uncharacterized protein family UPF0024 signature. 76 89 - T 15-10-2018 IPR020119 Pseudouridine synthase TruD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 Reactome: R-HSA-6782315 AM378_23140 e39e818931908d6749f453a38cb4ff2a 348 TIGRFAM TIGR00094 tRNA_TruD_broad: tRNA pseudouridine synthase, TruD family 4 341 1.3E-78 T 15-10-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM378_23140 e39e818931908d6749f453a38cb4ff2a 348 SUPERFAMILY SSF55120 3 339 4.17E-105 T 15-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM378_23140 e39e818931908d6749f453a38cb4ff2a 348 Gene3D G3DSA:3.30.2350.20 16 336 4.4E-121 T 15-10-2018 AM378_23140 e39e818931908d6749f453a38cb4ff2a 348 Gene3D G3DSA:3.30.2340.10 166 300 4.4E-121 T 15-10-2018 AM378_23140 e39e818931908d6749f453a38cb4ff2a 348 Hamap MF_01082 tRNA pseudouridine synthase D [truD]. 4 341 28.74 T 15-10-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM378_00700 3941490b391c61e4d372dce3b359ebbe 344 Gene3D G3DSA:3.40.50.300 1 140 5.8E-50 T 15-10-2018 AM378_00700 3941490b391c61e4d372dce3b359ebbe 344 SUPERFAMILY SSF52540 1 210 3.11E-53 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_00700 3941490b391c61e4d372dce3b359ebbe 344 TIGRFAM TIGR01128 holA: DNA polymerase III, delta subunit 18 332 1.0E-103 T 15-10-2018 IPR005790 DNA polymerase III, delta subunit GO:0003677|GO:0006260 AM378_00700 3941490b391c61e4d372dce3b359ebbe 344 Pfam PF14840 Processivity clamp loader gamma complex DNA pol III C-term 214 337 2.1E-65 T 15-10-2018 IPR032780 DNA polymerase III subunit delta, C-terminal KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM378_00700 3941490b391c61e4d372dce3b359ebbe 344 Pfam PF06144 DNA polymerase III, delta subunit 21 190 2.9E-41 T 15-10-2018 IPR010372 DNA polymerase III delta, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 AM378_00700 3941490b391c61e4d372dce3b359ebbe 344 SUPERFAMILY SSF48019 212 335 2.1E-37 T 15-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 AM378_00700 3941490b391c61e4d372dce3b359ebbe 344 Gene3D G3DSA:1.10.8.60 143 213 4.2E-25 T 15-10-2018 AM378_00700 3941490b391c61e4d372dce3b359ebbe 344 Gene3D G3DSA:1.20.272.10 214 343 8.5E-50 T 15-10-2018 AM378_00745 95eba66f5cd52274049bc8227802c3b0 246 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 24 132 2.2E-15 T 15-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 AM378_00745 95eba66f5cd52274049bc8227802c3b0 246 SUPERFAMILY SSF161098 24 223 8.76E-37 T 15-10-2018 IPR035906 MetI-like superfamily AM378_00745 95eba66f5cd52274049bc8227802c3b0 246 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 46 237 1.8E-24 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AM378_00745 95eba66f5cd52274049bc8227802c3b0 246 Gene3D G3DSA:1.10.3720.10 18 238 3.3E-43 T 15-10-2018 IPR035906 MetI-like superfamily AM378_20515 83c7ac35f84ba2ee1b62a120d4a0bd17 204 Pfam PF09186 Domain of unknown function (DUF1949) 141 196 3.1E-17 T 15-10-2018 IPR015269 Uncharacterised domain UPF0029, Impact, C-terminal AM378_20515 83c7ac35f84ba2ee1b62a120d4a0bd17 204 Pfam PF01205 Uncharacterized protein family UPF0029 18 125 1.4E-28 T 15-10-2018 IPR001498 Impact, N-terminal AM378_20515 83c7ac35f84ba2ee1b62a120d4a0bd17 204 Gene3D G3DSA:3.30.230.30 1 134 3.2E-52 T 15-10-2018 IPR036956 Impact, N-terminal domain superfamily AM378_20515 83c7ac35f84ba2ee1b62a120d4a0bd17 204 SUPERFAMILY SSF54980 138 203 1.04E-16 T 15-10-2018 IPR035647 EF-G domain III/V-like AM378_20515 83c7ac35f84ba2ee1b62a120d4a0bd17 204 SUPERFAMILY SSF54211 3 131 1.14E-42 T 15-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AM378_20515 83c7ac35f84ba2ee1b62a120d4a0bd17 204 TIGRFAM TIGR00257 IMPACT_YIGZ: uncharacterized protein, YigZ family 2 200 1.1E-72 T 15-10-2018 IPR015796 Impact family, bacterial/archaeal AM378_20515 83c7ac35f84ba2ee1b62a120d4a0bd17 204 ProSitePatterns PS00910 Uncharacterized protein family UPF0029 signature. 80 109 - T 15-10-2018 IPR020569 Uncharacterised protein family UPF0029, Impact, conserved site AM378_20515 83c7ac35f84ba2ee1b62a120d4a0bd17 204 Gene3D G3DSA:3.30.70.240 135 204 1.2E-25 T 15-10-2018 AM378_13040 792857e7a3216064d4cef19bd74aa59d 1108 Gene3D G3DSA:2.10.70.100 498 544 2.0E-15 T 15-10-2018 AM378_13040 792857e7a3216064d4cef19bd74aa59d 1108 Pfam PF00990 Diguanylate cyclase, GGDEF domain 681 836 8.9E-40 T 15-10-2018 IPR000160 GGDEF domain AM378_13040 792857e7a3216064d4cef19bd74aa59d 1108 Gene3D G3DSA:3.30.450.20 545 668 1.6E-19 T 15-10-2018 AM378_13040 792857e7a3216064d4cef19bd74aa59d 1108 SUPERFAMILY SSF55785 294 414 9.99E-24 T 15-10-2018 IPR035965 PAS domain superfamily AM378_13040 792857e7a3216064d4cef19bd74aa59d 1108 SMART SM00091 555 620 2.2E-5 T 15-10-2018 IPR000014 PAS domain AM378_13040 792857e7a3216064d4cef19bd74aa59d 1108 SMART SM00091 301 367 2.6E-12 T 15-10-2018 IPR000014 PAS domain AM378_13040 792857e7a3216064d4cef19bd74aa59d 1108 SMART SM00091 428 495 7.8 T 15-10-2018 IPR000014 PAS domain AM378_13040 792857e7a3216064d4cef19bd74aa59d 1108 Gene3D G3DSA:3.20.20.450 856 1101 6.5E-32 T 15-10-2018 IPR035919 EAL domain superfamily AM378_13040 792857e7a3216064d4cef19bd74aa59d 1108 SMART SM00052 853 1098 1.4E-8 T 15-10-2018 IPR001633 EAL domain AM378_13040 792857e7a3216064d4cef19bd74aa59d 1108 Pfam PF00563 EAL domain 891 1089 3.6E-27 T 15-10-2018 IPR001633 EAL domain AM378_13040 792857e7a3216064d4cef19bd74aa59d 1108 SUPERFAMILY SSF55785 539 664 1.26E-17 T 15-10-2018 IPR035965 PAS domain superfamily AM378_13040 792857e7a3216064d4cef19bd74aa59d 1108 Pfam PF08447 PAS fold 451 537 3.0E-17 T 15-10-2018 IPR013655 PAS fold-3 GO:0005515 AM378_13040 792857e7a3216064d4cef19bd74aa59d 1108 Pfam PF08447 PAS fold 325 408 1.2E-11 T 15-10-2018 IPR013655 PAS fold-3 GO:0005515 AM378_13040 792857e7a3216064d4cef19bd74aa59d 1108 SUPERFAMILY SSF141868 890 1090 4.84E-27 T 15-10-2018 IPR035919 EAL domain superfamily AM378_13040 792857e7a3216064d4cef19bd74aa59d 1108 Gene3D G3DSA:3.30.450.20 290 430 6.3E-26 T 15-10-2018 AM378_13040 792857e7a3216064d4cef19bd74aa59d 1108 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 475 550 1.7E-5 T 15-10-2018 IPR000014 PAS domain AM378_13040 792857e7a3216064d4cef19bd74aa59d 1108 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 298 422 7.7E-29 T 15-10-2018 IPR000014 PAS domain AM378_13040 792857e7a3216064d4cef19bd74aa59d 1108 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 552 675 4.9E-10 T 15-10-2018 IPR000014 PAS domain AM378_13040 792857e7a3216064d4cef19bd74aa59d 1108 SUPERFAMILY SSF55073 686 842 5.26E-45 T 15-10-2018 IPR029787 Nucleotide cyclase AM378_13040 792857e7a3216064d4cef19bd74aa59d 1108 SMART SM00267 670 841 1.0E-55 T 15-10-2018 IPR000160 GGDEF domain AM378_13040 792857e7a3216064d4cef19bd74aa59d 1108 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 679 840 4.7E-38 T 15-10-2018 IPR000160 GGDEF domain AM378_13040 792857e7a3216064d4cef19bd74aa59d 1108 Pfam PF05231 MASE1 20 276 6.5E-18 T 15-10-2018 IPR007895 MASE1 AM378_13040 792857e7a3216064d4cef19bd74aa59d 1108 Pfam PF08448 PAS fold 561 671 5.4E-8 T 15-10-2018 IPR013656 PAS fold-4 AM378_13040 792857e7a3216064d4cef19bd74aa59d 1108 Gene3D G3DSA:3.30.450.20 431 495 1.9E-12 T 15-10-2018 AM378_13040 792857e7a3216064d4cef19bd74aa59d 1108 Gene3D G3DSA:3.30.70.270 670 844 6.5E-54 T 15-10-2018 AM378_13040 792857e7a3216064d4cef19bd74aa59d 1108 SUPERFAMILY SSF55785 439 544 2.79E-17 T 15-10-2018 IPR035965 PAS domain superfamily AM378_13040 792857e7a3216064d4cef19bd74aa59d 1108 SMART SM00086 501 543 4.1E-8 T 15-10-2018 IPR001610 PAC motif AM378_13040 792857e7a3216064d4cef19bd74aa59d 1108 SMART SM00086 628 670 0.29 T 15-10-2018 IPR001610 PAC motif AM378_13040 792857e7a3216064d4cef19bd74aa59d 1108 SMART SM00086 374 416 2.6E-9 T 15-10-2018 IPR001610 PAC motif AM378_17250 15d24ef5708414702ab34440f5131102 236 SUPERFAMILY SSF64288 58 234 7.38E-42 T 15-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily AM378_17250 15d24ef5708414702ab34440f5131102 236 Gene3D G3DSA:1.10.10.10 7 75 4.0E-19 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_17250 15d24ef5708414702ab34440f5131102 236 Gene3D G3DSA:3.40.1410.10 79 235 2.1E-33 T 15-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily AM378_17250 15d24ef5708414702ab34440f5131102 236 SMART SM00345 11 70 9.2E-18 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM378_17250 15d24ef5708414702ab34440f5131102 236 Pfam PF00392 Bacterial regulatory proteins, gntR family 9 70 9.4E-18 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM378_17250 15d24ef5708414702ab34440f5131102 236 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 44 60 5.8E-9 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM378_17250 15d24ef5708414702ab34440f5131102 236 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 30 44 5.8E-9 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM378_17250 15d24ef5708414702ab34440f5131102 236 Pfam PF07702 UTRA domain 91 228 4.7E-35 T 15-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 AM378_17250 15d24ef5708414702ab34440f5131102 236 SUPERFAMILY SSF46785 5 84 3.34E-18 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM378_17250 15d24ef5708414702ab34440f5131102 236 SMART SM00866 91 230 5.9E-32 T 15-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 AM378_17695 8cb982b4321991be5f028d131cda8f13 210 ProSitePatterns PS00888 Cyclic nucleotide-binding domain signature 1. 30 46 - T 15-10-2018 IPR018488 Cyclic nucleotide-binding, conserved site AM378_17695 8cb982b4321991be5f028d131cda8f13 210 ProSitePatterns PS00889 Cyclic nucleotide-binding domain signature 2. 71 89 - T 15-10-2018 IPR018488 Cyclic nucleotide-binding, conserved site AM378_17695 8cb982b4321991be5f028d131cda8f13 210 SMART SM00100 2 122 7.6E-27 T 15-10-2018 IPR000595 Cyclic nucleotide-binding domain AM378_17695 8cb982b4321991be5f028d131cda8f13 210 ProSitePatterns PS00042 Crp-type HTH domain signature. 168 191 - T 15-10-2018 IPR018335 Transcription regulator HTH, Crp-type, conserved site GO:0003700|GO:0005622|GO:0006355 AM378_17695 8cb982b4321991be5f028d131cda8f13 210 SMART SM00419 160 208 4.5E-17 T 15-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 AM378_17695 8cb982b4321991be5f028d131cda8f13 210 Gene3D G3DSA:1.10.10.10 139 207 1.3E-35 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_17695 8cb982b4321991be5f028d131cda8f13 210 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 166 182 8.8E-11 T 15-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 AM378_17695 8cb982b4321991be5f028d131cda8f13 210 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 182 197 8.8E-11 T 15-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 AM378_17695 8cb982b4321991be5f028d131cda8f13 210 SUPERFAMILY SSF51206 8 136 2.49E-35 T 15-10-2018 IPR018490 Cyclic nucleotide-binding-like AM378_17695 8cb982b4321991be5f028d131cda8f13 210 Pfam PF00325 Bacterial regulatory proteins, crp family 166 197 1.8E-15 T 15-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 AM378_17695 8cb982b4321991be5f028d131cda8f13 210 Pfam PF00027 Cyclic nucleotide-binding domain 23 109 6.5E-24 T 15-10-2018 IPR000595 Cyclic nucleotide-binding domain AM378_17695 8cb982b4321991be5f028d131cda8f13 210 Gene3D G3DSA:2.60.120.10 10 138 1.2E-44 T 15-10-2018 IPR014710 RmlC-like jelly roll fold AM378_17695 8cb982b4321991be5f028d131cda8f13 210 SUPERFAMILY SSF46785 139 207 3.64E-16 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM378_20525 84219ec65ffc02959883cac3d69f3656 177 SUPERFAMILY SSF52218 1 170 4.07E-33 T 15-10-2018 IPR029039 Flavoprotein-like superfamily AM378_20525 84219ec65ffc02959883cac3d69f3656 177 ProSitePatterns PS00201 Flavodoxin signature. 5 21 - T 15-10-2018 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 AM378_20525 84219ec65ffc02959883cac3d69f3656 177 Pfam PF12724 Flavodoxin domain 4 151 6.7E-57 T 15-10-2018 IPR026816 Flavodoxin domain AM378_20525 84219ec65ffc02959883cac3d69f3656 177 Gene3D G3DSA:3.40.50.360 4 108 4.4E-13 T 15-10-2018 IPR029039 Flavoprotein-like superfamily AM378_08055 475d3f294d1a3c2c7e3775441e55813a 253 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 13 199 0.0016 T 15-10-2018 AM378_08055 475d3f294d1a3c2c7e3775441e55813a 253 Pfam PF00106 short chain dehydrogenase 14 209 1.4E-50 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_08055 475d3f294d1a3c2c7e3775441e55813a 253 Gene3D G3DSA:3.40.50.720 1 247 2.3E-73 T 15-10-2018 AM378_08055 475d3f294d1a3c2c7e3775441e55813a 253 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 152 180 - T 15-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AM378_08055 475d3f294d1a3c2c7e3775441e55813a 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 165 184 5.2E-23 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_08055 475d3f294d1a3c2c7e3775441e55813a 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 211 231 5.2E-23 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_08055 475d3f294d1a3c2c7e3775441e55813a 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 186 203 5.2E-23 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_08055 475d3f294d1a3c2c7e3775441e55813a 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 14 31 5.2E-23 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_08055 475d3f294d1a3c2c7e3775441e55813a 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 91 102 5.2E-23 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_08055 475d3f294d1a3c2c7e3775441e55813a 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 139 155 5.2E-23 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_08055 475d3f294d1a3c2c7e3775441e55813a 253 SUPERFAMILY SSF51735 10 241 1.8E-62 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily AM378_07305 ee4a803d541cec06755a56bb71e77bdd 458 Gene3D G3DSA:3.30.70.1350 204 283 1.0E-9 T 15-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 AM378_07305 ee4a803d541cec06755a56bb71e77bdd 458 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 9 273 4.2E-62 T 15-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 AM378_07305 ee4a803d541cec06755a56bb71e77bdd 458 SUPERFAMILY SSF160240 381 454 6.41E-16 T 15-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 AM378_07305 ee4a803d541cec06755a56bb71e77bdd 458 Pfam PF01545 Cation efflux family 12 203 3.6E-44 T 15-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 AM378_07305 ee4a803d541cec06755a56bb71e77bdd 458 Pfam PF16916 Dimerisation domain of Zinc Transporter 287 361 6.4E-10 T 15-10-2018 IPR027470 Cation efflux protein, cytoplasmic domain AM378_07305 ee4a803d541cec06755a56bb71e77bdd 458 Pfam PF16916 Dimerisation domain of Zinc Transporter 376 453 2.7E-15 T 15-10-2018 IPR027470 Cation efflux protein, cytoplasmic domain AM378_07305 ee4a803d541cec06755a56bb71e77bdd 458 Pfam PF16916 Dimerisation domain of Zinc Transporter 211 277 5.2E-9 T 15-10-2018 IPR027470 Cation efflux protein, cytoplasmic domain AM378_07305 ee4a803d541cec06755a56bb71e77bdd 458 SUPERFAMILY SSF160240 287 361 3.27E-10 T 15-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 AM378_07305 ee4a803d541cec06755a56bb71e77bdd 458 SUPERFAMILY SSF160240 206 279 1.57E-10 T 15-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 AM378_07305 ee4a803d541cec06755a56bb71e77bdd 458 Gene3D G3DSA:3.30.70.1350 284 363 2.8E-11 T 15-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 AM378_07305 ee4a803d541cec06755a56bb71e77bdd 458 Gene3D G3DSA:1.20.1510.10 5 203 8.7E-62 T 15-10-2018 IPR027469 Cation efflux transmembrane domain superfamily AM378_07305 ee4a803d541cec06755a56bb71e77bdd 458 SUPERFAMILY SSF161111 6 204 6.28E-51 T 15-10-2018 IPR027469 Cation efflux transmembrane domain superfamily AM378_07305 ee4a803d541cec06755a56bb71e77bdd 458 Gene3D G3DSA:3.30.70.1350 367 456 2.7E-16 T 15-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 AM378_05210 cab17f735b6212debfa2921818b5750b 267 Gene3D G3DSA:3.40.630.40 4 264 5.2E-72 T 15-10-2018 AM378_05210 cab17f735b6212debfa2921818b5750b 267 TIGRFAM TIGR02017 hutG_amidohyd: N-formylglutamate deformylase 7 264 2.4E-115 T 15-10-2018 IPR010247 N-formylglutamate deformylase AM378_05210 cab17f735b6212debfa2921818b5750b 267 SUPERFAMILY SSF53187 4 261 4.39E-79 T 15-10-2018 AM378_05210 cab17f735b6212debfa2921818b5750b 267 Pfam PF05013 N-formylglutamate amidohydrolase 15 232 1.1E-66 T 15-10-2018 IPR007709 N-formylglutamate amidohydrolase AM378_10960 655fc9eab42d05633b074d348538e75b 536 Gene3D G3DSA:1.20.1250.20 20 404 1.3E-41 T 15-10-2018 AM378_10960 655fc9eab42d05633b074d348538e75b 536 Pfam PF05977 Transmembrane secretion effector 12 527 1.4E-208 T 15-10-2018 IPR010290 Transmembrane secretion effector AM378_10960 655fc9eab42d05633b074d348538e75b 536 SUPERFAMILY SSF103473 21 409 7.72E-51 T 15-10-2018 IPR036259 MFS transporter superfamily AM378_02215 a37228a80552803e27ffe5bd5221ef57 736 Gene3D G3DSA:3.30.70.100 629 714 1.1E-18 T 15-10-2018 AM378_02215 a37228a80552803e27ffe5bd5221ef57 736 SUPERFAMILY SSF50182 559 617 1.34E-9 T 15-10-2018 IPR010920 LSM domain superfamily AM378_02215 a37228a80552803e27ffe5bd5221ef57 736 SUPERFAMILY SSF82861 478 557 1.31E-12 T 15-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 AM378_02215 a37228a80552803e27ffe5bd5221ef57 736 Gene3D G3DSA:2.30.30.60 575 623 1.9E-12 T 15-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily AM378_02215 a37228a80552803e27ffe5bd5221ef57 736 SUPERFAMILY SSF82689 631 722 3.4E-12 T 15-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 AM378_02215 a37228a80552803e27ffe5bd5221ef57 736 Pfam PF00924 Mechanosensitive ion channel 516 715 6.7E-37 T 15-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 AM378_10580 025362d2d86ab95003f8fc2bafd3dee4 447 Pfam PF10397 Adenylosuccinate lyase C-terminus 362 439 8.6E-18 T 15-10-2018 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AM378_10580 025362d2d86ab95003f8fc2bafd3dee4 447 PRINTS PR00145 Argininosuccinate lyase family signature 138 158 3.5E-8 T 15-10-2018 AM378_10580 025362d2d86ab95003f8fc2bafd3dee4 447 PRINTS PR00145 Argininosuccinate lyase family signature 97 119 3.5E-8 T 15-10-2018 AM378_10580 025362d2d86ab95003f8fc2bafd3dee4 447 PRINTS PR00145 Argininosuccinate lyase family signature 228 252 3.5E-8 T 15-10-2018 AM378_10580 025362d2d86ab95003f8fc2bafd3dee4 447 PRINTS PR00145 Argininosuccinate lyase family signature 273 289 3.5E-8 T 15-10-2018 AM378_10580 025362d2d86ab95003f8fc2bafd3dee4 447 TIGRFAM TIGR02426 protocat_pcaB: 3-carboxy-cis,cis-muconate cycloisomerase 3 346 9.4E-120 T 15-10-2018 IPR012789 3-carboxy-cis,cis-muconate cycloisomerase GO:0019619|GO:0047472 KEGG: 00362+5.5.1.2 AM378_10580 025362d2d86ab95003f8fc2bafd3dee4 447 Gene3D G3DSA:1.20.200.10 103 358 3.1E-89 T 15-10-2018 AM378_10580 025362d2d86ab95003f8fc2bafd3dee4 447 PRINTS PR00149 Fumarate lyase superfamily signature 143 161 7.7E-22 T 15-10-2018 IPR000362 Fumarate lyase family AM378_10580 025362d2d86ab95003f8fc2bafd3dee4 447 PRINTS PR00149 Fumarate lyase superfamily signature 273 289 7.7E-22 T 15-10-2018 IPR000362 Fumarate lyase family AM378_10580 025362d2d86ab95003f8fc2bafd3dee4 447 PRINTS PR00149 Fumarate lyase superfamily signature 98 116 7.7E-22 T 15-10-2018 IPR000362 Fumarate lyase family AM378_10580 025362d2d86ab95003f8fc2bafd3dee4 447 PRINTS PR00149 Fumarate lyase superfamily signature 228 255 7.7E-22 T 15-10-2018 IPR000362 Fumarate lyase family AM378_10580 025362d2d86ab95003f8fc2bafd3dee4 447 SMART SM00998 361 440 4.7E-23 T 15-10-2018 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AM378_10580 025362d2d86ab95003f8fc2bafd3dee4 447 Pfam PF00206 Lyase 11 295 1.4E-48 T 15-10-2018 IPR022761 Fumarate lyase, N-terminal AM378_10580 025362d2d86ab95003f8fc2bafd3dee4 447 SUPERFAMILY SSF48557 2 442 4.56E-109 T 15-10-2018 IPR008948 L-Aspartase-like GO:0003824 AM378_10580 025362d2d86ab95003f8fc2bafd3dee4 447 ProSitePatterns PS00163 Fumarate lyases signature. 273 282 - T 15-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 AM378_10580 025362d2d86ab95003f8fc2bafd3dee4 447 Gene3D G3DSA:1.10.40.30 360 446 5.3E-26 T 15-10-2018 AM378_10580 025362d2d86ab95003f8fc2bafd3dee4 447 Gene3D G3DSA:1.10.275.10 1 102 1.3E-31 T 15-10-2018 IPR024083 Fumarase/histidase, N-terminal AM378_07075 eb15f1d7796c9114873a1afbc7069555 2836 Gene3D G3DSA:3.40.50.12780 1981 2391 5.5E-137 T 15-10-2018 AM378_07075 eb15f1d7796c9114873a1afbc7069555 2836 Pfam PF00668 Condensation domain 1097 1509 6.1E-40 T 15-10-2018 IPR001242 Condensation domain AM378_07075 eb15f1d7796c9114873a1afbc7069555 2836 Pfam PF00668 Condensation domain 15 458 2.9E-66 T 15-10-2018 IPR001242 Condensation domain AM378_07075 eb15f1d7796c9114873a1afbc7069555 2836 Pfam PF00668 Condensation domain 1553 1974 9.8E-66 T 15-10-2018 IPR001242 Condensation domain AM378_07075 eb15f1d7796c9114873a1afbc7069555 2836 SUPERFAMILY SSF53474 2587 2829 5.17E-49 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold AM378_07075 eb15f1d7796c9114873a1afbc7069555 2836 Gene3D G3DSA:3.40.50.12780 473 882 2.8E-122 T 15-10-2018 AM378_07075 eb15f1d7796c9114873a1afbc7069555 2836 ProSitePatterns PS00455 Putative AMP-binding domain signature. 628 639 - T 15-10-2018 IPR020845 AMP-binding, conserved site AM378_07075 eb15f1d7796c9114873a1afbc7069555 2836 SUPERFAMILY SSF47336 2506 2578 2.22E-13 T 15-10-2018 IPR036736 ACP-like superfamily AM378_07075 eb15f1d7796c9114873a1afbc7069555 2836 Pfam PF00550 Phosphopantetheine attachment site 2514 2577 2.7E-8 T 15-10-2018 IPR009081 Phosphopantetheine binding ACP domain AM378_07075 eb15f1d7796c9114873a1afbc7069555 2836 Pfam PF00550 Phosphopantetheine attachment site 1003 1064 1.6E-9 T 15-10-2018 IPR009081 Phosphopantetheine binding ACP domain AM378_07075 eb15f1d7796c9114873a1afbc7069555 2836 SUPERFAMILY SSF52777 1255 1515 5.34E-27 T 15-10-2018 AM378_07075 eb15f1d7796c9114873a1afbc7069555 2836 SUPERFAMILY SSF56801 438 1013 2.88E-140 T 15-10-2018 AM378_07075 eb15f1d7796c9114873a1afbc7069555 2836 SUPERFAMILY SSF52777 1550 1744 1.09E-29 T 15-10-2018 AM378_07075 eb15f1d7796c9114873a1afbc7069555 2836 SUPERFAMILY SSF52777 1730 1969 2.33E-46 T 15-10-2018 AM378_07075 eb15f1d7796c9114873a1afbc7069555 2836 SMART SM00824 Thioesterase 2606 2829 2.3E-4 T 15-10-2018 IPR020802 Polyketide synthase, thioesterase domain GO:0009058|GO:0016788 AM378_07075 eb15f1d7796c9114873a1afbc7069555 2836 SMART SM00823 Phosphopantetheine attachment site 1001 1069 0.03 T 15-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 AM378_07075 eb15f1d7796c9114873a1afbc7069555 2836 SMART SM00823 Phosphopantetheine attachment site 2512 2581 0.045 T 15-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 AM378_07075 eb15f1d7796c9114873a1afbc7069555 2836 Gene3D G3DSA:3.40.50.1820 2505 2831 1.2E-104 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold AM378_07075 eb15f1d7796c9114873a1afbc7069555 2836 SUPERFAMILY SSF56801 1935 2524 1.44E-150 T 15-10-2018 AM378_07075 eb15f1d7796c9114873a1afbc7069555 2836 Gene3D G3DSA:3.30.559.10 1071 1241 1.3E-31 T 15-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 AM378_07075 eb15f1d7796c9114873a1afbc7069555 2836 Pfam PF00501 AMP-binding enzyme 480 890 2.5E-86 T 15-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 AM378_07075 eb15f1d7796c9114873a1afbc7069555 2836 Pfam PF00501 AMP-binding enzyme 1996 2397 2.6E-97 T 15-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 AM378_07075 eb15f1d7796c9114873a1afbc7069555 2836 ProSitePatterns PS00455 Putative AMP-binding domain signature. 2134 2145 - T 15-10-2018 IPR020845 AMP-binding, conserved site AM378_07075 eb15f1d7796c9114873a1afbc7069555 2836 SUPERFAMILY SSF47336 994 1064 1.57E-13 T 15-10-2018 IPR036736 ACP-like superfamily AM378_07075 eb15f1d7796c9114873a1afbc7069555 2836 SUPERFAMILY SSF52777 206 442 4.45E-36 T 15-10-2018 AM378_07075 eb15f1d7796c9114873a1afbc7069555 2836 SUPERFAMILY SSF52777 1087 1269 6.78E-26 T 15-10-2018 AM378_07075 eb15f1d7796c9114873a1afbc7069555 2836 Gene3D G3DSA:3.30.300.30 884 990 1.1E-30 T 15-10-2018 AM378_07075 eb15f1d7796c9114873a1afbc7069555 2836 Gene3D G3DSA:3.30.559.10 19 222 1.8E-45 T 15-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 AM378_07075 eb15f1d7796c9114873a1afbc7069555 2836 TIGRFAM TIGR01720 NRPS-para261: non-ribosomal peptide synthase domain TIGR01720 1378 1516 1.5E-24 T 15-10-2018 IPR010060 Non-ribosomal peptide synthase AM378_07075 eb15f1d7796c9114873a1afbc7069555 2836 Gene3D G3DSA:3.30.559.30 1243 1518 2.1E-58 T 15-10-2018 AM378_07075 eb15f1d7796c9114873a1afbc7069555 2836 SUPERFAMILY SSF52777 21 199 1.33E-25 T 15-10-2018 AM378_07075 eb15f1d7796c9114873a1afbc7069555 2836 Gene3D G3DSA:3.30.300.30 2392 2504 7.8E-29 T 15-10-2018 AM378_07075 eb15f1d7796c9114873a1afbc7069555 2836 Gene3D G3DSA:3.30.559.30 1730 1973 1.1E-101 T 15-10-2018 AM378_07075 eb15f1d7796c9114873a1afbc7069555 2836 Gene3D G3DSA:1.10.1200.10 991 1069 2.3E-18 T 15-10-2018 IPR036736 ACP-like superfamily AM378_07075 eb15f1d7796c9114873a1afbc7069555 2836 Pfam PF13193 AMP-binding enzyme C-terminal domain 898 976 1.2E-9 T 15-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain AM378_07075 eb15f1d7796c9114873a1afbc7069555 2836 Pfam PF13193 AMP-binding enzyme C-terminal domain 2405 2488 5.8E-7 T 15-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain AM378_07075 eb15f1d7796c9114873a1afbc7069555 2836 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 2016 2421 2.9E-130 T 15-10-2018 IPR010071 Amino acid adenylation domain AM378_07075 eb15f1d7796c9114873a1afbc7069555 2836 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 501 914 4.1E-112 T 15-10-2018 IPR010071 Amino acid adenylation domain AM378_07075 eb15f1d7796c9114873a1afbc7069555 2836 Gene3D G3DSA:3.30.559.30 223 448 7.6E-47 T 15-10-2018 AM378_07075 eb15f1d7796c9114873a1afbc7069555 2836 Pfam PF00975 Thioesterase domain 2605 2819 1.4E-35 T 15-10-2018 IPR001031 Thioesterase GO:0009058|GO:0016788 Reactome: R-HSA-75105 AM378_07075 eb15f1d7796c9114873a1afbc7069555 2836 Gene3D G3DSA:3.30.559.10 1556 1911 1.1E-101 T 15-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 AM378_07075 eb15f1d7796c9114873a1afbc7069555 2836 ProSitePatterns PS00012 Phosphopantetheine attachment site. 1025 1040 - T 15-10-2018 IPR006162 Phosphopantetheine attachment site AM378_07075 eb15f1d7796c9114873a1afbc7069555 2836 ProSitePatterns PS00012 Phosphopantetheine attachment site. 2536 2551 - T 15-10-2018 IPR006162 Phosphopantetheine attachment site AM378_18670 c02a0ebe5157b023c755085c7745c660 383 Gene3D G3DSA:3.30.70.360 181 296 7.0E-82 T 15-10-2018 AM378_18670 c02a0ebe5157b023c755085c7745c660 383 Gene3D G3DSA:3.40.630.10 30 364 7.0E-82 T 15-10-2018 AM378_18670 c02a0ebe5157b023c755085c7745c660 383 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 110 147 - T 15-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 AM378_18670 c02a0ebe5157b023c755085c7745c660 383 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 75 84 - T 15-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 AM378_18670 c02a0ebe5157b023c755085c7745c660 383 SUPERFAMILY SSF55031 181 296 4.93E-22 T 15-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain AM378_18670 c02a0ebe5157b023c755085c7745c660 383 Pfam PF01546 Peptidase family M20/M25/M40 76 378 2.1E-35 T 15-10-2018 IPR002933 Peptidase M20 GO:0016787 AM378_18670 c02a0ebe5157b023c755085c7745c660 383 Hamap MF_01108 Acetylornithine deacetylase [argE]. 3 382 65.068 T 15-10-2018 IPR010169 Acetylornithine deacetylase ArgE GO:0005737|GO:0006526|GO:0008777 KEGG: 00220+3.5.1.16|MetaCyc: PWY-5154 AM378_18670 c02a0ebe5157b023c755085c7745c660 383 SUPERFAMILY SSF53187 4 381 7.14E-58 T 15-10-2018 AM378_18670 c02a0ebe5157b023c755085c7745c660 383 TIGRFAM TIGR01892 AcOrn-deacetyl: acetylornithine deacetylase (ArgE) 10 377 1.9E-154 T 15-10-2018 IPR010169 Acetylornithine deacetylase ArgE GO:0005737|GO:0006526|GO:0008777 KEGG: 00220+3.5.1.16|MetaCyc: PWY-5154 AM378_18670 c02a0ebe5157b023c755085c7745c660 383 Pfam PF07687 Peptidase dimerisation domain 178 287 8.9E-25 T 15-10-2018 IPR011650 Peptidase M20, dimerisation domain AM378_19405 cc6e81833cecadf8e4ea4025aed8e969 545 PRINTS PR01900 YidC translocation/secretion protein signature 465 480 1.3E-29 T 15-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 AM378_19405 cc6e81833cecadf8e4ea4025aed8e969 545 PRINTS PR01900 YidC translocation/secretion protein signature 336 352 1.3E-29 T 15-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 AM378_19405 cc6e81833cecadf8e4ea4025aed8e969 545 PRINTS PR01900 YidC translocation/secretion protein signature 485 509 1.3E-29 T 15-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 AM378_19405 cc6e81833cecadf8e4ea4025aed8e969 545 TIGRFAM TIGR03593 yidC_nterm: membrane protein insertase, YidC/Oxa1 family, N-terminal domain 3 349 1.3E-118 T 15-10-2018 IPR028053 Membrane insertase YidC, N-terminal AM378_19405 cc6e81833cecadf8e4ea4025aed8e969 545 Hamap MF_01810 Membrane protein insertase YidC [yidC]. 4 532 26.858 T 15-10-2018 IPR019998 Membrane insertase YidC GO:0016021|GO:0032977 AM378_19405 cc6e81833cecadf8e4ea4025aed8e969 545 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 350 530 9.6E-70 T 15-10-2018 IPR028055 Membrane insertase YidC/Oxa1, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM378_19405 cc6e81833cecadf8e4ea4025aed8e969 545 Pfam PF14849 YidC periplasmic domain 61 340 2.1E-86 T 15-10-2018 IPR038210 Membrane insertase YidC, periplasmic domain AM378_19405 cc6e81833cecadf8e4ea4025aed8e969 545 Gene3D G3DSA:2.70.98.90 56 330 2.5E-107 T 15-10-2018 IPR038221 YidC, periplasmic domain superfamily AM378_19405 cc6e81833cecadf8e4ea4025aed8e969 545 PRINTS PR00701 60kDa inner membrane protein signature 459 481 2.2E-95 T 15-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 AM378_19405 cc6e81833cecadf8e4ea4025aed8e969 545 PRINTS PR00701 60kDa inner membrane protein signature 248 263 2.2E-95 T 15-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 AM378_19405 cc6e81833cecadf8e4ea4025aed8e969 545 PRINTS PR00701 60kDa inner membrane protein signature 496 519 2.2E-95 T 15-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 AM378_19405 cc6e81833cecadf8e4ea4025aed8e969 545 PRINTS PR00701 60kDa inner membrane protein signature 66 87 2.2E-95 T 15-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 AM378_19405 cc6e81833cecadf8e4ea4025aed8e969 545 PRINTS PR00701 60kDa inner membrane protein signature 158 178 2.2E-95 T 15-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 AM378_19405 cc6e81833cecadf8e4ea4025aed8e969 545 PRINTS PR00701 60kDa inner membrane protein signature 2 23 2.2E-95 T 15-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 AM378_19405 cc6e81833cecadf8e4ea4025aed8e969 545 PRINTS PR00701 60kDa inner membrane protein signature 321 341 2.2E-95 T 15-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 AM378_19405 cc6e81833cecadf8e4ea4025aed8e969 545 PRINTS PR00701 60kDa inner membrane protein signature 412 435 2.2E-95 T 15-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 AM378_19405 cc6e81833cecadf8e4ea4025aed8e969 545 Pfam PF02096 60Kd inner membrane protein 351 530 4.1E-61 T 15-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 AM378_20730 be16a5bfabdc87e64cffaafce3bbbae3 427 SUPERFAMILY SSF56059 104 322 7.42E-69 T 15-10-2018 AM378_20730 be16a5bfabdc87e64cffaafce3bbbae3 427 Gene3D G3DSA:3.30.470.20 191 329 3.2E-61 T 15-10-2018 AM378_20730 be16a5bfabdc87e64cffaafce3bbbae3 427 Pfam PF02843 Phosphoribosylglycinamide synthetase, C domain 331 421 1.2E-29 T 15-10-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AM378_20730 be16a5bfabdc87e64cffaafce3bbbae3 427 ProSitePatterns PS00184 Phosphoribosylglycinamide synthetase signature. 290 297 - T 15-10-2018 IPR020559 Phosphoribosylglycinamide synthetase, conserved site GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AM378_20730 be16a5bfabdc87e64cffaafce3bbbae3 427 Hamap MF_00138 Phosphoribosylamine--glycine ligase [purD]. 1 423 43.897 T 15-10-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AM378_20730 be16a5bfabdc87e64cffaafce3bbbae3 427 Gene3D G3DSA:3.90.600.10 330 424 2.0E-34 T 15-10-2018 IPR037123 Phosphoribosylglycinamide synthetase, C-domain superfamily GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AM378_20730 be16a5bfabdc87e64cffaafce3bbbae3 427 SMART SM01210 330 423 3.7E-56 T 15-10-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AM378_20730 be16a5bfabdc87e64cffaafce3bbbae3 427 Pfam PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain 103 296 2.0E-83 T 15-10-2018 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AM378_20730 be16a5bfabdc87e64cffaafce3bbbae3 427 SMART SM01209 103 296 2.0E-140 T 15-10-2018 AM378_20730 be16a5bfabdc87e64cffaafce3bbbae3 427 SUPERFAMILY SSF51246 329 424 9.42E-33 T 15-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 AM378_20730 be16a5bfabdc87e64cffaafce3bbbae3 427 Gene3D G3DSA:3.30.1490.20 121 190 9.0E-29 T 15-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 AM378_20730 be16a5bfabdc87e64cffaafce3bbbae3 427 SUPERFAMILY SSF52440 1 103 3.88E-37 T 15-10-2018 IPR016185 Pre-ATP-grasp domain superfamily AM378_20730 be16a5bfabdc87e64cffaafce3bbbae3 427 TIGRFAM TIGR00877 purD: phosphoribosylamine--glycine ligase 1 423 5.8E-185 T 15-10-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AM378_20730 be16a5bfabdc87e64cffaafce3bbbae3 427 Gene3D G3DSA:3.40.50.20 2 95 7.4E-38 T 15-10-2018 AM378_20730 be16a5bfabdc87e64cffaafce3bbbae3 427 Pfam PF02844 Phosphoribosylglycinamide synthetase, N domain 1 102 1.2E-35 T 15-10-2018 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AM378_03390 96b2a9dd2df061cdc5f0c35304cb275d 241 Hamap MF_00688 Leucyl/phenylalanyl-tRNA--protein transferase [aat]. 1 241 98.987 T 15-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 AM378_03390 96b2a9dd2df061cdc5f0c35304cb275d 241 Gene3D G3DSA:2.30.210.20 2 61 1.2E-26 T 15-10-2018 AM378_03390 96b2a9dd2df061cdc5f0c35304cb275d 241 Gene3D G3DSA:3.40.630.70 62 236 7.7E-69 T 15-10-2018 AM378_03390 96b2a9dd2df061cdc5f0c35304cb275d 241 TIGRFAM TIGR00667 aat: leucyl/phenylalanyl-tRNA--protein transferase 39 215 1.4E-75 T 15-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 AM378_03390 96b2a9dd2df061cdc5f0c35304cb275d 241 Pfam PF03588 Leucyl/phenylalanyl-tRNA protein transferase 37 203 8.4E-73 T 15-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 AM378_03390 96b2a9dd2df061cdc5f0c35304cb275d 241 SUPERFAMILY SSF55729 3 228 1.43E-94 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase AM378_10510 0edb011ac5c2876dcf25c144ba6320d8 841 Gene3D G3DSA:2.60.40.3110 274 362 1.0E-29 T 15-10-2018 AM378_10510 0edb011ac5c2876dcf25c144ba6320d8 841 Pfam PF13953 PapC C-terminal domain 761 817 1.4E-14 T 15-10-2018 IPR025949 PapC-like, C-terminal domain AM378_10510 0edb011ac5c2876dcf25c144ba6320d8 841 Pfam PF00577 Outer membrane usher protein 199 749 3.3E-191 T 15-10-2018 IPR000015 Outer membrane usher protein GO:0009297|GO:0015473|GO:0016020 AM378_10510 0edb011ac5c2876dcf25c144ba6320d8 841 Gene3D G3DSA:2.60.40.2610 663 754 3.6E-13 T 15-10-2018 AM378_10510 0edb011ac5c2876dcf25c144ba6320d8 841 Gene3D G3DSA:3.10.20.410 35 158 4.2E-22 T 15-10-2018 AM378_10510 0edb011ac5c2876dcf25c144ba6320d8 841 Pfam PF13954 PapC N-terminal domain 37 182 1.1E-39 T 15-10-2018 IPR025885 PapC, N-terminal domain GO:0005515 AM378_10510 0edb011ac5c2876dcf25c144ba6320d8 841 ProSitePatterns PS01151 Fimbrial biogenesis outer membrane usher protein signature. 316 326 - T 15-10-2018 IPR018030 Fimbrial membrane usher, conserved site AM378_10510 0edb011ac5c2876dcf25c144ba6320d8 841 SUPERFAMILY SSF141729 36 156 5.23E-32 T 15-10-2018 IPR037224 PapC, N-terminal domain superfamily GO:0005515 AM378_10510 0edb011ac5c2876dcf25c144ba6320d8 841 Gene3D G3DSA:2.60.40.2070 758 836 2.3E-28 T 15-10-2018 AM378_17490 64785cfc4ceead4666b66fb658fcd270 84 ProSitePatterns PS00056 Ribosomal protein S17 signature. 56 68 - T 15-10-2018 IPR019979 Ribosomal protein S17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM378_17490 64785cfc4ceead4666b66fb658fcd270 84 TIGRFAM TIGR03635 uS17_bact: ribosomal protein uS17 6 76 1.0E-38 T 15-10-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM378_17490 64785cfc4ceead4666b66fb658fcd270 84 ProDom PD001295 RIBOSOMAL S17 30S RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 40S S11 S17P S11 6 76 2.0E-34 T 15-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM378_17490 64785cfc4ceead4666b66fb658fcd270 84 Gene3D G3DSA:2.40.50.140 1 84 2.0E-39 T 15-10-2018 AM378_17490 64785cfc4ceead4666b66fb658fcd270 84 PRINTS PR00973 Ribosomal protein S17 family signature 56 66 4.5E-14 T 15-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM378_17490 64785cfc4ceead4666b66fb658fcd270 84 PRINTS PR00973 Ribosomal protein S17 family signature 24 47 4.5E-14 T 15-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM378_17490 64785cfc4ceead4666b66fb658fcd270 84 PRINTS PR00973 Ribosomal protein S17 family signature 66 73 4.5E-14 T 15-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM378_17490 64785cfc4ceead4666b66fb658fcd270 84 SUPERFAMILY SSF50249 6 82 1.33E-33 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold AM378_17490 64785cfc4ceead4666b66fb658fcd270 84 Pfam PF00366 Ribosomal protein S17 10 76 6.2E-34 T 15-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM378_17490 64785cfc4ceead4666b66fb658fcd270 84 Hamap MF_01345_B 30S ribosomal protein S17 [rpsQ]. 5 80 25.177 T 15-10-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM378_02040 682778e2a574bf98e75a2fe89ed5d4cc 253 Gene3D G3DSA:3.40.190.10 79 207 1.7E-17 T 15-10-2018 AM378_02040 682778e2a574bf98e75a2fe89ed5d4cc 253 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 75 208 2.2E-18 T 15-10-2018 AM378_02040 682778e2a574bf98e75a2fe89ed5d4cc 253 SUPERFAMILY SSF53850 63 223 4.35E-16 T 15-10-2018 AM378_02040 682778e2a574bf98e75a2fe89ed5d4cc 253 Gene3D G3DSA:3.40.190.10 81 188 1.7E-17 T 15-10-2018 AM378_20830 0069083690ac76e87c5dfe8d671870b1 1314 SUPERFAMILY SSF52777 21 195 1.1E-32 T 15-10-2018 AM378_20830 0069083690ac76e87c5dfe8d671870b1 1314 SMART SM00824 Thioesterase 1086 1306 9.9E-6 T 15-10-2018 IPR020802 Polyketide synthase, thioesterase domain GO:0009058|GO:0016788 AM378_20830 0069083690ac76e87c5dfe8d671870b1 1314 ProSitePatterns PS00012 Phosphopantetheine attachment site. 1016 1031 - T 15-10-2018 IPR006162 Phosphopantetheine attachment site AM378_20830 0069083690ac76e87c5dfe8d671870b1 1314 Gene3D G3DSA:3.40.50.12780 461 871 1.6E-140 T 15-10-2018 AM378_20830 0069083690ac76e87c5dfe8d671870b1 1314 Gene3D G3DSA:3.30.559.10 19 218 6.8E-49 T 15-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 AM378_20830 0069083690ac76e87c5dfe8d671870b1 1314 SUPERFAMILY SSF53474 1065 1311 1.89E-46 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold AM378_20830 0069083690ac76e87c5dfe8d671870b1 1314 SUPERFAMILY SSF52777 202 462 8.23E-34 T 15-10-2018 AM378_20830 0069083690ac76e87c5dfe8d671870b1 1314 Pfam PF00975 Thioesterase domain 1084 1296 3.2E-37 T 15-10-2018 IPR001031 Thioesterase GO:0009058|GO:0016788 Reactome: R-HSA-75105 AM378_20830 0069083690ac76e87c5dfe8d671870b1 1314 Pfam PF00501 AMP-binding enzyme 476 877 8.0E-101 T 15-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 AM378_20830 0069083690ac76e87c5dfe8d671870b1 1314 Gene3D G3DSA:3.30.559.30 227 447 2.7E-44 T 15-10-2018 AM378_20830 0069083690ac76e87c5dfe8d671870b1 1314 SUPERFAMILY SSF56801 447 1003 1.7E-154 T 15-10-2018 AM378_20830 0069083690ac76e87c5dfe8d671870b1 1314 Gene3D G3DSA:3.30.300.30 872 983 2.4E-29 T 15-10-2018 AM378_20830 0069083690ac76e87c5dfe8d671870b1 1314 Pfam PF13193 AMP-binding enzyme C-terminal domain 885 967 4.0E-7 T 15-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain AM378_20830 0069083690ac76e87c5dfe8d671870b1 1314 Gene3D G3DSA:3.40.50.1820 984 1313 2.4E-103 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold AM378_20830 0069083690ac76e87c5dfe8d671870b1 1314 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 496 900 1.2E-134 T 15-10-2018 IPR010071 Amino acid adenylation domain AM378_20830 0069083690ac76e87c5dfe8d671870b1 1314 Pfam PF00668 Condensation domain 15 455 4.0E-68 T 15-10-2018 IPR001242 Condensation domain AM378_20830 0069083690ac76e87c5dfe8d671870b1 1314 Pfam PF00550 Phosphopantetheine attachment site 994 1054 2.2E-9 T 15-10-2018 IPR009081 Phosphopantetheine binding ACP domain AM378_20830 0069083690ac76e87c5dfe8d671870b1 1314 ProSitePatterns PS00455 Putative AMP-binding domain signature. 614 625 - T 15-10-2018 IPR020845 AMP-binding, conserved site AM378_20830 0069083690ac76e87c5dfe8d671870b1 1314 SUPERFAMILY SSF47336 986 1057 1.15E-12 T 15-10-2018 IPR036736 ACP-like superfamily AM378_14670 a520948edb15d8b06c947f46c52c635a 175 Gene3D G3DSA:2.60.40.1090 39 174 2.1E-27 T 15-10-2018 IPR036937 Fimbrial-type adhesion domain superfamily GO:0007155|GO:0009289 AM378_14670 a520948edb15d8b06c947f46c52c635a 175 SUPERFAMILY SSF49401 30 175 4.97E-24 T 15-10-2018 IPR008966 Adhesion domain superfamily AM378_22105 1b3fbe3adf6a755af300fb1594dcacfc 263 Gene3D G3DSA:3.40.50.720 6 258 2.9E-80 T 15-10-2018 AM378_22105 1b3fbe3adf6a755af300fb1594dcacfc 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 14 31 2.0E-40 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_22105 1b3fbe3adf6a755af300fb1594dcacfc 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 183 200 2.0E-40 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_22105 1b3fbe3adf6a755af300fb1594dcacfc 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 88 99 2.0E-40 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_22105 1b3fbe3adf6a755af300fb1594dcacfc 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 135 151 2.0E-40 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_22105 1b3fbe3adf6a755af300fb1594dcacfc 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 217 237 2.0E-40 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_22105 1b3fbe3adf6a755af300fb1594dcacfc 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 162 181 2.0E-40 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_22105 1b3fbe3adf6a755af300fb1594dcacfc 263 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 19 252 8.6E-65 T 15-10-2018 AM378_22105 1b3fbe3adf6a755af300fb1594dcacfc 263 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 141 149 2.0E-6 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_22105 1b3fbe3adf6a755af300fb1594dcacfc 263 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 88 99 2.0E-6 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_22105 1b3fbe3adf6a755af300fb1594dcacfc 263 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 162 181 2.0E-6 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_22105 1b3fbe3adf6a755af300fb1594dcacfc 263 SUPERFAMILY SSF51735 12 254 7.01E-79 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily AM378_22105 1b3fbe3adf6a755af300fb1594dcacfc 263 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 13 198 0.0042 T 15-10-2018 AM378_22105 1b3fbe3adf6a755af300fb1594dcacfc 263 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 149 177 - T 15-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AM378_17765 76c832f8d39dc03b603b2352a4794fe0 394 Hamap MF_01044 Protein TsgA [tsgA]. 1 390 28.705 T 15-10-2018 IPR023528 Major facilitator superfamily transporter, TsgA AM378_17765 76c832f8d39dc03b603b2352a4794fe0 394 Gene3D G3DSA:1.20.1250.20 3 187 1.6E-17 T 15-10-2018 AM378_17765 76c832f8d39dc03b603b2352a4794fe0 394 SUPERFAMILY SSF103473 5 389 5.49E-39 T 15-10-2018 IPR036259 MFS transporter superfamily AM378_17765 76c832f8d39dc03b603b2352a4794fe0 394 Gene3D G3DSA:1.20.1250.20 207 388 1.6E-19 T 15-10-2018 AM378_17765 76c832f8d39dc03b603b2352a4794fe0 394 Pfam PF07690 Major Facilitator Superfamily 14 321 2.0E-21 T 15-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM378_09205 f6a844811177fb0664c2be16e04eebcc 216 SMART SM00421 153 210 1.1E-23 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM378_09205 f6a844811177fb0664c2be16e04eebcc 216 SMART SM00448 7 120 1.3E-34 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM378_09205 f6a844811177fb0664c2be16e04eebcc 216 SUPERFAMILY SSF46894 144 212 4.76E-20 T 15-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AM378_09205 f6a844811177fb0664c2be16e04eebcc 216 Gene3D G3DSA:1.10.10.10 129 214 1.0E-27 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_09205 f6a844811177fb0664c2be16e04eebcc 216 Pfam PF00196 Bacterial regulatory proteins, luxR family 155 209 1.4E-21 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM378_09205 f6a844811177fb0664c2be16e04eebcc 216 Pfam PF00072 Response regulator receiver domain 9 120 3.0E-31 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM378_09205 f6a844811177fb0664c2be16e04eebcc 216 Gene3D G3DSA:3.40.50.2300 3 128 7.0E-34 T 15-10-2018 AM378_09205 f6a844811177fb0664c2be16e04eebcc 216 ProSitePatterns PS00622 LuxR-type HTH domain signature. 170 197 - T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM378_09205 f6a844811177fb0664c2be16e04eebcc 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 156 170 2.3E-13 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM378_09205 f6a844811177fb0664c2be16e04eebcc 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 170 186 2.3E-13 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM378_09205 f6a844811177fb0664c2be16e04eebcc 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 186 198 2.3E-13 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM378_09205 f6a844811177fb0664c2be16e04eebcc 216 SUPERFAMILY SSF52172 8 136 3.27E-34 T 15-10-2018 IPR011006 CheY-like superfamily AM378_14985 b33d5a651af0031952c2324386e9ae69 226 SMART SM00345 25 83 1.3E-9 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM378_14985 b33d5a651af0031952c2324386e9ae69 226 SUPERFAMILY SSF46785 18 87 2.73E-13 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM378_14985 b33d5a651af0031952c2324386e9ae69 226 SUPERFAMILY SSF48008 89 223 1.73E-27 T 15-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AM378_14985 b33d5a651af0031952c2324386e9ae69 226 SMART SM00895 93 217 1.6E-17 T 15-10-2018 IPR011711 GntR, C-terminal AM378_14985 b33d5a651af0031952c2324386e9ae69 226 Gene3D G3DSA:1.20.120.530 87 225 2.3E-28 T 15-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AM378_14985 b33d5a651af0031952c2324386e9ae69 226 Pfam PF07729 FCD domain 93 215 8.4E-30 T 15-10-2018 IPR011711 GntR, C-terminal AM378_14985 b33d5a651af0031952c2324386e9ae69 226 Gene3D G3DSA:1.10.10.10 17 84 3.5E-15 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_14985 b33d5a651af0031952c2324386e9ae69 226 Pfam PF00392 Bacterial regulatory proteins, gntR family 25 83 3.9E-11 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM378_23945 a353fb4c512276927435842379263095 208 Pfam PF00857 Isochorismatase family 14 165 7.2E-23 T 15-10-2018 IPR000868 Isochorismatase-like GO:0003824 AM378_23945 a353fb4c512276927435842379263095 208 SUPERFAMILY SSF52499 5 202 4.06E-53 T 15-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 AM378_23945 a353fb4c512276927435842379263095 208 Gene3D G3DSA:3.40.50.850 1 208 4.3E-61 T 15-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 AM378_03710 c36dffe47fcb4178eb4ba66a24f17e48 359 Gene3D G3DSA:2.40.160.20 22 204 5.9E-69 T 15-10-2018 AM378_03710 c36dffe47fcb4178eb4ba66a24f17e48 359 Pfam PF01389 OmpA-like transmembrane domain 23 206 2.9E-73 T 15-10-2018 IPR000498 Outer membrane protein OmpA-like, transmembrane domain GO:0009279|GO:0016021 AM378_03710 c36dffe47fcb4178eb4ba66a24f17e48 359 SUPERFAMILY SSF56925 22 206 4.45E-40 T 15-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel AM378_03710 c36dffe47fcb4178eb4ba66a24f17e48 359 PRINTS PR01021 OMPA domain signature 281 297 3.2E-23 T 15-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AM378_03710 c36dffe47fcb4178eb4ba66a24f17e48 359 PRINTS PR01021 OMPA domain signature 266 281 3.2E-23 T 15-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AM378_03710 c36dffe47fcb4178eb4ba66a24f17e48 359 PRINTS PR01021 OMPA domain signature 234 256 3.2E-23 T 15-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AM378_03710 c36dffe47fcb4178eb4ba66a24f17e48 359 Pfam PF00691 OmpA family 233 321 1.7E-22 T 15-10-2018 IPR006665 OmpA-like domain AM378_03710 c36dffe47fcb4178eb4ba66a24f17e48 359 ProSitePatterns PS01068 OmpA-like domain. 268 312 - T 15-10-2018 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 AM378_03710 c36dffe47fcb4178eb4ba66a24f17e48 359 SUPERFAMILY SSF103088 220 347 3.4E-34 T 15-10-2018 IPR036737 OmpA-like domain superfamily AM378_03710 c36dffe47fcb4178eb4ba66a24f17e48 359 Gene3D G3DSA:3.30.1330.60 209 356 3.3E-55 T 15-10-2018 IPR036737 OmpA-like domain superfamily AM378_03710 c36dffe47fcb4178eb4ba66a24f17e48 359 PRINTS PR01022 Outer membrane protein A signature 177 191 6.9E-65 T 15-10-2018 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 AM378_03710 c36dffe47fcb4178eb4ba66a24f17e48 359 PRINTS PR01022 Outer membrane protein A signature 191 205 6.9E-65 T 15-10-2018 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 AM378_03710 c36dffe47fcb4178eb4ba66a24f17e48 359 PRINTS PR01022 Outer membrane protein A signature 251 270 6.9E-65 T 15-10-2018 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 AM378_03710 c36dffe47fcb4178eb4ba66a24f17e48 359 PRINTS PR01022 Outer membrane protein A signature 326 339 6.9E-65 T 15-10-2018 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 AM378_03710 c36dffe47fcb4178eb4ba66a24f17e48 359 PRINTS PR01022 Outer membrane protein A signature 114 130 6.9E-65 T 15-10-2018 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 AM378_03710 c36dffe47fcb4178eb4ba66a24f17e48 359 PRINTS PR01022 Outer membrane protein A signature 290 309 6.9E-65 T 15-10-2018 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 AM378_03710 c36dffe47fcb4178eb4ba66a24f17e48 359 PRINTS PR01022 Outer membrane protein A signature 222 237 6.9E-65 T 15-10-2018 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 AM378_06025 e70cb8d9cef37184edb91d2fe7595ce0 190 Pfam PF04060 Putative Fe-S cluster 44 75 3.8E-13 T 15-10-2018 IPR007202 4Fe-4S domain GO:0051536 AM378_06025 e70cb8d9cef37184edb91d2fe7595ce0 190 PIRSF PIRSF005784 3 189 1.9E-85 T 15-10-2018 IPR016463 Electron transport complex, RnfB/RsxB, Proteobacteria GO:0005886|GO:0022900|GO:0051536 AM378_06025 e70cb8d9cef37184edb91d2fe7595ce0 190 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 145 156 - T 15-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AM378_06025 e70cb8d9cef37184edb91d2fe7595ce0 190 Gene3D G3DSA:1.10.15.40 38 84 1.8E-6 T 15-10-2018 AM378_06025 e70cb8d9cef37184edb91d2fe7595ce0 190 Pfam PF14697 4Fe-4S dicluster domain 108 162 3.2E-17 T 15-10-2018 AM378_06025 e70cb8d9cef37184edb91d2fe7595ce0 190 Hamap MF_00463 Ion-translocating oxidoreductase complex subunit B [rsxB]. 4 167 25.724 T 15-10-2018 IPR010207 Ion-translocating oxidoreductase complex, RnfB/RsxB GO:0009055|GO:0051536 AM378_06025 e70cb8d9cef37184edb91d2fe7595ce0 190 SUPERFAMILY SSF54862 39 174 2.93E-29 T 15-10-2018 AM378_06025 e70cb8d9cef37184edb91d2fe7595ce0 190 TIGRFAM TIGR01944 rnfB: electron transport complex, RnfABCDGE type, B subunit 2 189 2.8E-88 T 15-10-2018 IPR010207 Ion-translocating oxidoreductase complex, RnfB/RsxB GO:0009055|GO:0051536 AM378_06025 e70cb8d9cef37184edb91d2fe7595ce0 190 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 115 126 - T 15-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AM378_06025 e70cb8d9cef37184edb91d2fe7595ce0 190 Gene3D G3DSA:3.30.70.20 85 183 1.8E-21 T 15-10-2018 AM378_19135 ee575c9fc21ede97cfb7678ae4abecc0 933 TIGRFAM TIGR00593 pola: DNA polymerase I 9 933 4.4E-283 T 15-10-2018 IPR018320 DNA polymerase 1 GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM378_19135 ee575c9fc21ede97cfb7678ae4abecc0 933 SMART SM00475 7 268 6.5E-140 T 15-10-2018 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 AM378_19135 ee575c9fc21ede97cfb7678ae4abecc0 933 Pfam PF00476 DNA polymerase family A 556 931 3.5E-155 T 15-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM378_19135 ee575c9fc21ede97cfb7678ae4abecc0 933 ProSitePatterns PS00447 DNA polymerase family A signature. 758 777 - T 15-10-2018 IPR019760 DNA-directed DNA polymerase, family A, conserved site GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM378_19135 ee575c9fc21ede97cfb7678ae4abecc0 933 SMART SM00279 173 208 9.6E-14 T 15-10-2018 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 AM378_19135 ee575c9fc21ede97cfb7678ae4abecc0 933 Gene3D G3DSA:1.20.1060.10 547 662 5.4E-40 T 15-10-2018 AM378_19135 ee575c9fc21ede97cfb7678ae4abecc0 933 PRINTS PR00868 DNA-polymerase family A (pol I) signature 704 727 7.6E-80 T 15-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM378_19135 ee575c9fc21ede97cfb7678ae4abecc0 933 PRINTS PR00868 DNA-polymerase family A (pol I) signature 849 865 7.6E-80 T 15-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM378_19135 ee575c9fc21ede97cfb7678ae4abecc0 933 PRINTS PR00868 DNA-polymerase family A (pol I) signature 758 783 7.6E-80 T 15-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM378_19135 ee575c9fc21ede97cfb7678ae4abecc0 933 PRINTS PR00868 DNA-polymerase family A (pol I) signature 817 828 7.6E-80 T 15-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM378_19135 ee575c9fc21ede97cfb7678ae4abecc0 933 PRINTS PR00868 DNA-polymerase family A (pol I) signature 659 681 7.6E-80 T 15-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM378_19135 ee575c9fc21ede97cfb7678ae4abecc0 933 PRINTS PR00868 DNA-polymerase family A (pol I) signature 795 806 7.6E-80 T 15-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM378_19135 ee575c9fc21ede97cfb7678ae4abecc0 933 PRINTS PR00868 DNA-polymerase family A (pol I) signature 734 747 7.6E-80 T 15-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM378_19135 ee575c9fc21ede97cfb7678ae4abecc0 933 PRINTS PR00868 DNA-polymerase family A (pol I) signature 682 697 7.6E-80 T 15-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM378_19135 ee575c9fc21ede97cfb7678ae4abecc0 933 PRINTS PR00868 DNA-polymerase family A (pol I) signature 880 893 7.6E-80 T 15-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM378_19135 ee575c9fc21ede97cfb7678ae4abecc0 933 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 171 271 2.8E-30 T 15-10-2018 IPR020045 DNA polymerase I-like, H3TH domain GO:0003677|GO:0003824 AM378_19135 ee575c9fc21ede97cfb7678ae4abecc0 933 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 9 170 1.6E-54 T 15-10-2018 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 AM378_19135 ee575c9fc21ede97cfb7678ae4abecc0 933 SMART SM00474 334 521 3.1E-47 T 15-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 AM378_19135 ee575c9fc21ede97cfb7678ae4abecc0 933 SUPERFAMILY SSF47807 171 291 2.09E-31 T 15-10-2018 IPR036279 5'-3' exonuclease, C-terminal domain superfamily AM378_19135 ee575c9fc21ede97cfb7678ae4abecc0 933 Pfam PF01612 3'-5' exonuclease 334 520 5.6E-45 T 15-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 AM378_19135 ee575c9fc21ede97cfb7678ae4abecc0 933 SMART SM00482 690 897 5.2E-117 T 15-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM378_19135 ee575c9fc21ede97cfb7678ae4abecc0 933 Gene3D G3DSA:3.30.420.10 331 546 7.3E-72 T 15-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AM378_19135 ee575c9fc21ede97cfb7678ae4abecc0 933 Gene3D G3DSA:3.30.70.370 668 929 1.0E-116 T 15-10-2018 AM378_19135 ee575c9fc21ede97cfb7678ae4abecc0 933 Gene3D G3DSA:1.10.150.20 713 856 1.0E-116 T 15-10-2018 AM378_19135 ee575c9fc21ede97cfb7678ae4abecc0 933 SUPERFAMILY SSF53098 337 522 6.17E-57 T 15-10-2018 IPR012337 Ribonuclease H-like superfamily AM378_19135 ee575c9fc21ede97cfb7678ae4abecc0 933 Gene3D G3DSA:3.40.50.1010 9 284 1.8E-96 T 15-10-2018 AM378_19135 ee575c9fc21ede97cfb7678ae4abecc0 933 SUPERFAMILY SSF56672 526 933 2.67E-159 T 15-10-2018 AM378_19135 ee575c9fc21ede97cfb7678ae4abecc0 933 Gene3D G3DSA:1.10.150.20 174 253 1.8E-96 T 15-10-2018 AM378_19135 ee575c9fc21ede97cfb7678ae4abecc0 933 SUPERFAMILY SSF88723 7 170 1.2E-57 T 15-10-2018 IPR029060 PIN-like domain superfamily AM378_19105 9a2b32d546d518c8955e6afdb1ffd22c 470 Gene3D G3DSA:3.40.50.2300 1 124 7.1E-45 T 15-10-2018 AM378_19105 9a2b32d546d518c8955e6afdb1ffd22c 470 Pfam PF02954 Bacterial regulatory protein, Fis family 428 467 1.7E-15 T 15-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AM378_19105 9a2b32d546d518c8955e6afdb1ffd22c 470 Gene3D G3DSA:3.40.50.300 128 311 5.7E-66 T 15-10-2018 AM378_19105 9a2b32d546d518c8955e6afdb1ffd22c 470 SUPERFAMILY SSF46689 381 470 5.02E-25 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AM378_19105 9a2b32d546d518c8955e6afdb1ffd22c 470 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 227 242 - T 15-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AM378_19105 9a2b32d546d518c8955e6afdb1ffd22c 470 Gene3D G3DSA:1.10.10.60 380 470 4.9E-29 T 15-10-2018 AM378_19105 9a2b32d546d518c8955e6afdb1ffd22c 470 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 433 450 1.4E-10 T 15-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AM378_19105 9a2b32d546d518c8955e6afdb1ffd22c 470 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 450 470 1.4E-10 T 15-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AM378_19105 9a2b32d546d518c8955e6afdb1ffd22c 470 SMART SM00448 4 115 9.0E-36 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM378_19105 9a2b32d546d518c8955e6afdb1ffd22c 470 SMART SM00382 161 312 2.1E-12 T 15-10-2018 IPR003593 AAA+ ATPase domain AM378_19105 9a2b32d546d518c8955e6afdb1ffd22c 470 TIGRFAM TIGR01818 ntrC: nitrogen regulation protein NR(I) 6 467 1.8E-245 T 15-10-2018 IPR010114 DNA-binding transcriptional regulator NtrC GO:0000156|GO:0000160|GO:0003677|GO:0005524|GO:0006808 AM378_19105 9a2b32d546d518c8955e6afdb1ffd22c 470 Gene3D G3DSA:1.10.8.60 312 378 3.0E-20 T 15-10-2018 AM378_19105 9a2b32d546d518c8955e6afdb1ffd22c 470 Pfam PF00158 Sigma-54 interaction domain 141 307 7.9E-70 T 15-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 AM378_19105 9a2b32d546d518c8955e6afdb1ffd22c 470 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 165 178 - T 15-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 AM378_19105 9a2b32d546d518c8955e6afdb1ffd22c 470 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 354 363 - T 15-10-2018 IPR025944 Sigma-54 interaction domain, conserved site AM378_19105 9a2b32d546d518c8955e6afdb1ffd22c 470 Pfam PF00072 Response regulator receiver domain 6 115 2.2E-30 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM378_19105 9a2b32d546d518c8955e6afdb1ffd22c 470 SUPERFAMILY SSF52540 140 383 3.55E-74 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_19105 9a2b32d546d518c8955e6afdb1ffd22c 470 SUPERFAMILY SSF52172 6 186 7.97E-46 T 15-10-2018 IPR011006 CheY-like superfamily AM378_13220 4a7c73640761ee16f27b89e68b8c406e 289 Gene3D G3DSA:3.10.290.10 1 62 1.6E-23 T 15-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 AM378_13220 4a7c73640761ee16f27b89e68b8c406e 289 Gene3D G3DSA:3.30.70.580 70 229 3.7E-58 T 15-10-2018 AM378_13220 4a7c73640761ee16f27b89e68b8c406e 289 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 104 118 - T 15-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 AM378_13220 4a7c73640761ee16f27b89e68b8c406e 289 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 73 226 1.6E-53 T 15-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 AM378_13220 4a7c73640761ee16f27b89e68b8c406e 289 Pfam PF01479 S4 domain 8 52 2.6E-10 T 15-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM378_13220 4a7c73640761ee16f27b89e68b8c406e 289 SUPERFAMILY SSF55120 69 229 1.65E-38 T 15-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM378_13220 4a7c73640761ee16f27b89e68b8c406e 289 Gene3D G3DSA:3.30.70.1560 134 207 3.7E-58 T 15-10-2018 AM378_13220 4a7c73640761ee16f27b89e68b8c406e 289 SUPERFAMILY SSF55174 7 62 2.69E-13 T 15-10-2018 AM378_13220 4a7c73640761ee16f27b89e68b8c406e 289 Pfam PF00849 RNA pseudouridylate synthase 69 195 2.9E-15 T 15-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM378_13220 4a7c73640761ee16f27b89e68b8c406e 289 SMART SM00363 7 63 1.8E-11 T 15-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM378_09785 03166805fc4a0905ea917e50af9a44c9 349 SUPERFAMILY SSF52172 1 108 4.98E-27 T 15-10-2018 IPR011006 CheY-like superfamily AM378_09785 03166805fc4a0905ea917e50af9a44c9 349 Pfam PF01339 CheB methylesterase 159 336 3.1E-63 T 15-10-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 AM378_09785 03166805fc4a0905ea917e50af9a44c9 349 SMART SM00448 4 119 6.7E-22 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM378_09785 03166805fc4a0905ea917e50af9a44c9 349 PIRSF PIRSF000876 1 346 4.7E-138 T 15-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 AM378_09785 03166805fc4a0905ea917e50af9a44c9 349 Gene3D G3DSA:3.40.50.180 148 349 4.4E-84 T 15-10-2018 IPR035909 Methylesterase CheB, C-terminal AM378_09785 03166805fc4a0905ea917e50af9a44c9 349 Gene3D G3DSA:3.40.50.2300 1 133 8.0E-31 T 15-10-2018 AM378_09785 03166805fc4a0905ea917e50af9a44c9 349 SUPERFAMILY SSF52738 156 342 4.58E-75 T 15-10-2018 IPR035909 Methylesterase CheB, C-terminal AM378_09785 03166805fc4a0905ea917e50af9a44c9 349 Hamap MF_00099 Chemotaxis response regulator protein-glutamate methylesterase [cheB]. 4 342 41.465 T 15-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 AM378_09785 03166805fc4a0905ea917e50af9a44c9 349 Pfam PF00072 Response regulator receiver domain 6 109 6.3E-24 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM378_23685 cf2aa1f2e5b0f2a19bcee6cb53e51309 777 SUPERFAMILY SSF57783 31 94 4.76E-8 T 15-10-2018 AM378_23685 cf2aa1f2e5b0f2a19bcee6cb53e51309 777 Gene3D G3DSA:3.40.50.300 460 639 5.5E-12 T 15-10-2018 AM378_23685 cf2aa1f2e5b0f2a19bcee6cb53e51309 777 Pfam PF13362 Toprim domain 214 304 7.1E-11 T 15-10-2018 IPR006171 TOPRIM domain AM378_23685 cf2aa1f2e5b0f2a19bcee6cb53e51309 777 SUPERFAMILY SSF46785 674 772 3.81E-36 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM378_23685 cf2aa1f2e5b0f2a19bcee6cb53e51309 777 SMART SM00778 32 68 1.1E-17 T 15-10-2018 IPR013237 Bacteriophage T7, Gp4, DNA primase/helicase, N-terminal GO:0003896|GO:0004386|GO:0008270 AM378_23685 cf2aa1f2e5b0f2a19bcee6cb53e51309 777 Pfam PF08706 D5 N terminal like 373 470 5.7E-8 T 15-10-2018 IPR014818 Bacteriophage/plasmid primase, P4, C-terminal AM378_23685 cf2aa1f2e5b0f2a19bcee6cb53e51309 777 SUPERFAMILY SSF52540 477 626 1.4E-15 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_23685 cf2aa1f2e5b0f2a19bcee6cb53e51309 777 Pfam PF03288 Poxvirus D5 protein-like 673 772 1.3E-16 T 15-10-2018 IPR004968 DNA primase/nucleoside triphosphatase, C-terminal AM378_23685 cf2aa1f2e5b0f2a19bcee6cb53e51309 777 Gene3D G3DSA:1.10.10.10 674 773 1.1E-36 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_23685 cf2aa1f2e5b0f2a19bcee6cb53e51309 777 SMART SM00885 339 466 1.7E-20 T 15-10-2018 IPR014818 Bacteriophage/plasmid primase, P4, C-terminal AM378_23685 cf2aa1f2e5b0f2a19bcee6cb53e51309 777 Pfam PF08273 Zinc-binding domain of primase-helicase 32 68 3.7E-17 T 15-10-2018 IPR013237 Bacteriophage T7, Gp4, DNA primase/helicase, N-terminal GO:0003896|GO:0004386|GO:0008270 AM378_06675 d0ba6d32604b9ca6803030b972a701b0 291 Pfam PF07859 alpha/beta hydrolase fold 73 160 3.3E-15 T 15-10-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0016787 AM378_06675 d0ba6d32604b9ca6803030b972a701b0 291 Gene3D G3DSA:3.40.50.1820 9 287 7.8E-57 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold AM378_06675 d0ba6d32604b9ca6803030b972a701b0 291 SUPERFAMILY SSF53474 16 280 1.59E-41 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold AM378_12250 f33e24e23bb6b1b36886f8b66daff3cc 498 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 428 442 1.8E-10 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM378_12250 f33e24e23bb6b1b36886f8b66daff3cc 498 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 442 458 1.8E-10 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM378_12250 f33e24e23bb6b1b36886f8b66daff3cc 498 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 458 470 1.8E-10 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM378_12250 f33e24e23bb6b1b36886f8b66daff3cc 498 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 140 262 1.1E-10 T 15-10-2018 IPR000014 PAS domain AM378_12250 f33e24e23bb6b1b36886f8b66daff3cc 498 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 263 387 6.1E-13 T 15-10-2018 IPR000014 PAS domain AM378_12250 f33e24e23bb6b1b36886f8b66daff3cc 498 Pfam PF08448 PAS fold 22 136 1.2E-6 T 15-10-2018 IPR013656 PAS fold-4 AM378_12250 f33e24e23bb6b1b36886f8b66daff3cc 498 Pfam PF13426 PAS domain 279 379 1.1E-7 T 15-10-2018 IPR000014 PAS domain AM378_12250 f33e24e23bb6b1b36886f8b66daff3cc 498 Pfam PF13426 PAS domain 159 251 1.3E-5 T 15-10-2018 IPR000014 PAS domain AM378_12250 f33e24e23bb6b1b36886f8b66daff3cc 498 Pfam PF00196 Bacterial regulatory proteins, luxR family 428 482 1.2E-17 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM378_12250 f33e24e23bb6b1b36886f8b66daff3cc 498 SUPERFAMILY SSF55785 11 126 1.18E-9 T 15-10-2018 IPR035965 PAS domain superfamily AM378_12250 f33e24e23bb6b1b36886f8b66daff3cc 498 SMART SM00086 93 137 68.0 T 15-10-2018 IPR001610 PAC motif AM378_12250 f33e24e23bb6b1b36886f8b66daff3cc 498 SMART SM00086 215 255 45.0 T 15-10-2018 IPR001610 PAC motif AM378_12250 f33e24e23bb6b1b36886f8b66daff3cc 498 SMART SM00086 340 380 5.4 T 15-10-2018 IPR001610 PAC motif AM378_12250 f33e24e23bb6b1b36886f8b66daff3cc 498 Gene3D G3DSA:3.30.450.20 3 138 1.0E-11 T 15-10-2018 AM378_12250 f33e24e23bb6b1b36886f8b66daff3cc 498 SUPERFAMILY SSF55785 136 251 5.15E-14 T 15-10-2018 IPR035965 PAS domain superfamily AM378_12250 f33e24e23bb6b1b36886f8b66daff3cc 498 Gene3D G3DSA:3.30.450.20 254 378 3.7E-19 T 15-10-2018 AM378_12250 f33e24e23bb6b1b36886f8b66daff3cc 498 Gene3D G3DSA:3.30.450.20 139 252 2.7E-12 T 15-10-2018 AM378_12250 f33e24e23bb6b1b36886f8b66daff3cc 498 Gene3D G3DSA:1.10.10.10 379 492 5.2E-28 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_12250 f33e24e23bb6b1b36886f8b66daff3cc 498 SMART SM00421 425 482 8.1E-23 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM378_12250 f33e24e23bb6b1b36886f8b66daff3cc 498 SMART SM00091 267 334 3.1E-6 T 15-10-2018 IPR000014 PAS domain AM378_12250 f33e24e23bb6b1b36886f8b66daff3cc 498 SMART SM00091 13 78 4.5E-4 T 15-10-2018 IPR000014 PAS domain AM378_12250 f33e24e23bb6b1b36886f8b66daff3cc 498 SMART SM00091 142 209 0.0014 T 15-10-2018 IPR000014 PAS domain AM378_12250 f33e24e23bb6b1b36886f8b66daff3cc 498 SUPERFAMILY SSF46894 423 488 3.27E-20 T 15-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AM378_12250 f33e24e23bb6b1b36886f8b66daff3cc 498 SUPERFAMILY SSF55785 255 378 8.86E-19 T 15-10-2018 IPR035965 PAS domain superfamily AM378_13360 f57eb4cc1f6c17d923a291419fbef7a7 426 PRINTS PR00481 Cytosol aminopeptidase signature 245 266 2.6E-46 T 15-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AM378_13360 f57eb4cc1f6c17d923a291419fbef7a7 426 PRINTS PR00481 Cytosol aminopeptidase signature 208 229 2.6E-46 T 15-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AM378_13360 f57eb4cc1f6c17d923a291419fbef7a7 426 PRINTS PR00481 Cytosol aminopeptidase signature 267 287 2.6E-46 T 15-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AM378_13360 f57eb4cc1f6c17d923a291419fbef7a7 426 PRINTS PR00481 Cytosol aminopeptidase signature 295 310 2.6E-46 T 15-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AM378_13360 f57eb4cc1f6c17d923a291419fbef7a7 426 PRINTS PR00481 Cytosol aminopeptidase signature 186 203 2.6E-46 T 15-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AM378_13360 f57eb4cc1f6c17d923a291419fbef7a7 426 Hamap MF_00504 Peptidase B [pepB]. 1 423 66.955 T 15-10-2018 IPR008330 Peptidase M17, peptidase B GO:0004177|GO:0005737|GO:0006508|GO:0008235|GO:0030145 KEGG: 00480+3.4.11.23 AM378_13360 f57eb4cc1f6c17d923a291419fbef7a7 426 SUPERFAMILY SSF53187 103 423 2.35E-105 T 15-10-2018 AM378_13360 f57eb4cc1f6c17d923a291419fbef7a7 426 PIRSF PIRSF036388 1 426 3.8E-235 T 15-10-2018 IPR008330 Peptidase M17, peptidase B GO:0004177|GO:0005737|GO:0006508|GO:0008235|GO:0030145 KEGG: 00480+3.4.11.23 AM378_13360 f57eb4cc1f6c17d923a291419fbef7a7 426 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 105 417 6.1E-106 T 15-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 AM378_13360 f57eb4cc1f6c17d923a291419fbef7a7 426 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 271 278 - T 15-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 AM378_13360 f57eb4cc1f6c17d923a291419fbef7a7 426 Gene3D G3DSA:3.40.630.10 89 426 1.9E-108 T 15-10-2018 AM378_13360 f57eb4cc1f6c17d923a291419fbef7a7 426 Pfam PF12404 Peptidase 1 77 8.7E-37 T 15-10-2018 IPR008330 Peptidase M17, peptidase B GO:0004177|GO:0005737|GO:0006508|GO:0008235|GO:0030145 KEGG: 00480+3.4.11.23 AM378_13500 b49e9d05d7c34cf70c96b0a06bce74df 112 Gene3D G3DSA:3.30.70.120 1 112 1.1E-48 T 15-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal AM378_13500 b49e9d05d7c34cf70c96b0a06bce74df 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 2.3E-44 T 15-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AM378_13500 b49e9d05d7c34cf70c96b0a06bce74df 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 15-10-2018 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 AM378_13500 b49e9d05d7c34cf70c96b0a06bce74df 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 15-10-2018 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 AM378_13500 b49e9d05d7c34cf70c96b0a06bce74df 112 PRINTS PR00340 P-II protein signature 2 17 1.8E-44 T 15-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AM378_13500 b49e9d05d7c34cf70c96b0a06bce74df 112 PRINTS PR00340 P-II protein signature 23 41 1.8E-44 T 15-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AM378_13500 b49e9d05d7c34cf70c96b0a06bce74df 112 PRINTS PR00340 P-II protein signature 52 75 1.8E-44 T 15-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AM378_13500 b49e9d05d7c34cf70c96b0a06bce74df 112 PRINTS PR00340 P-II protein signature 83 103 1.8E-44 T 15-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AM378_13500 b49e9d05d7c34cf70c96b0a06bce74df 112 PIRSF PIRSF039144 1 112 4.0E-58 T 15-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AM378_13500 b49e9d05d7c34cf70c96b0a06bce74df 112 SMART SM00938 4 105 4.3E-68 T 15-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AM378_13500 b49e9d05d7c34cf70c96b0a06bce74df 112 SUPERFAMILY SSF54913 1 112 7.63E-47 T 15-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta AM378_06580 ad851aa7bce8b0a362fd0fc972970a16 289 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 240 282 - T 15-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AM378_06580 ad851aa7bce8b0a362fd0fc972970a16 289 Gene3D G3DSA:1.10.10.60 235 288 8.9E-18 T 15-10-2018 AM378_06580 ad851aa7bce8b0a362fd0fc972970a16 289 Gene3D G3DSA:1.10.10.60 187 234 1.6E-15 T 15-10-2018 AM378_06580 ad851aa7bce8b0a362fd0fc972970a16 289 SUPERFAMILY SSF46689 189 237 1.61E-11 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AM378_06580 ad851aa7bce8b0a362fd0fc972970a16 289 SUPERFAMILY SSF46689 240 288 1.94E-13 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AM378_06580 ad851aa7bce8b0a362fd0fc972970a16 289 SMART SM00342 203 286 1.0E-32 T 15-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM378_06580 ad851aa7bce8b0a362fd0fc972970a16 289 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 270 286 3.1E-6 T 15-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM378_06580 ad851aa7bce8b0a362fd0fc972970a16 289 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 255 270 3.1E-6 T 15-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM378_06580 ad851aa7bce8b0a362fd0fc972970a16 289 Pfam PF12833 Helix-turn-helix domain 209 287 1.1E-23 T 15-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM378_05520 1bd7db0526752a6c736b2c229eee2abc 118 SUPERFAMILY SSF74731 3 117 2.09E-50 T 15-10-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM378_05520 1bd7db0526752a6c736b2c229eee2abc 118 Gene3D G3DSA:1.10.720.90 2 55 2.2E-24 T 15-10-2018 AM378_05520 1bd7db0526752a6c736b2c229eee2abc 118 TIGRFAM TIGR01032 rplT_bact: ribosomal protein bL20 1 114 1.7E-52 T 15-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM378_05520 1bd7db0526752a6c736b2c229eee2abc 118 Pfam PF00453 Ribosomal protein L20 3 109 1.0E-48 T 15-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM378_05520 1bd7db0526752a6c736b2c229eee2abc 118 Gene3D G3DSA:1.10.1900.20 56 118 6.0E-29 T 15-10-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM378_05520 1bd7db0526752a6c736b2c229eee2abc 118 ProDom PD002389 RIBOSOMAL RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN L20 50S L20 CHLOROPLAST BACTERIAL ORGANELLE 21 72 4.0E-14 T 15-10-2018 AM378_05520 1bd7db0526752a6c736b2c229eee2abc 118 Hamap MF_00382 50S ribosomal protein L20 [rplT]. 2 115 30.927 T 15-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM378_05520 1bd7db0526752a6c736b2c229eee2abc 118 PRINTS PR00062 Ribosomal protein L20 signature 75 101 1.2E-42 T 15-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM378_05520 1bd7db0526752a6c736b2c229eee2abc 118 PRINTS PR00062 Ribosomal protein L20 signature 42 71 1.2E-42 T 15-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM378_05520 1bd7db0526752a6c736b2c229eee2abc 118 PRINTS PR00062 Ribosomal protein L20 signature 12 41 1.2E-42 T 15-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM378_05520 1bd7db0526752a6c736b2c229eee2abc 118 ProSitePatterns PS00937 Ribosomal protein L20 signature. 54 70 - T 15-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM378_22320 c104529fd642bdf36f5636d75ef479cf 425 TIGRFAM TIGR00804 nupC: nucleoside transporter, NupC family 5 422 3.8E-154 T 15-10-2018 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial GO:0005337|GO:0016020|GO:1901642 Reactome: R-HSA-83936 AM378_22320 c104529fd642bdf36f5636d75ef479cf 425 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 201 422 1.0E-76 T 15-10-2018 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: R-HSA-83936 AM378_22320 c104529fd642bdf36f5636d75ef479cf 425 Pfam PF07670 Nucleoside recognition 99 195 1.3E-8 T 15-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 AM378_22320 c104529fd642bdf36f5636d75ef479cf 425 Pfam PF01773 Na+ dependent nucleoside transporter N-terminus 8 81 3.5E-23 T 15-10-2018 IPR002668 Concentrative nucleoside transporter N-terminal domain Reactome: R-HSA-83936 AM378_18690 fd7913466c61867d3ae740e892e2d537 386 SUPERFAMILY SSF53383 9 381 1.77E-119 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM378_18690 fd7913466c61867d3ae740e892e2d537 386 TIGRFAM TIGR02080 O_succ_thio_ly: O-succinylhomoserine (thiol)-lyase 3 382 1.0E-205 T 15-10-2018 IPR011821 O-succinylhomoserine (thiol)-lyase KEGG: 00270+2.5.1.48|KEGG: 00450+2.5.1.48|KEGG: 00920+2.5.1.48|MetaCyc: PWY-801 AM378_18690 fd7913466c61867d3ae740e892e2d537 386 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 190 204 - T 15-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 AM378_18690 fd7913466c61867d3ae740e892e2d537 386 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 6 381 1.1E-140 T 15-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 AM378_18690 fd7913466c61867d3ae740e892e2d537 386 Gene3D G3DSA:3.90.1150.10 248 385 4.0E-53 T 15-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AM378_18690 fd7913466c61867d3ae740e892e2d537 386 Gene3D G3DSA:3.40.640.10 1 247 1.6E-87 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AM378_18690 fd7913466c61867d3ae740e892e2d537 386 PIRSF PIRSF001434 1 384 1.1E-134 T 15-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 AM378_21120 3dba1001d3e4400c1f48905b41a603d3 132 SUPERFAMILY SSF54995 1 103 1.44E-37 T 15-10-2018 IPR035980 Ribosomal protein S6 superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM378_21120 3dba1001d3e4400c1f48905b41a603d3 132 Pfam PF01250 Ribosomal protein S6 3 91 6.6E-28 T 15-10-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM378_21120 3dba1001d3e4400c1f48905b41a603d3 132 TIGRFAM TIGR00166 S6: ribosomal protein bS6 1 94 8.4E-38 T 15-10-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM378_21120 3dba1001d3e4400c1f48905b41a603d3 132 ProSitePatterns PS01048 Ribosomal protein S6 signature. 43 52 - T 15-10-2018 IPR020815 Ribosomal protein S6, conserved site GO:0003735|GO:0005840|GO:0006412|GO:0019843 AM378_21120 3dba1001d3e4400c1f48905b41a603d3 132 Hamap MF_00360 30S ribosomal protein S6 [rpsF]. 1 94 21.897 T 15-10-2018 IPR020814 Ribosomal protein S6, plastid/chloroplast GO:0003735|GO:0005840|GO:0006412|GO:0019843 AM378_21120 3dba1001d3e4400c1f48905b41a603d3 132 Gene3D G3DSA:3.30.70.60 1 92 3.0E-33 T 15-10-2018 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 AM378_00300 6ddfb9055f7a71598c9dcb1507f1a772 320 Hamap MF_00323 Ferrochelatase [hemH]. 4 320 36.888 T 15-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 AM378_00300 6ddfb9055f7a71598c9dcb1507f1a772 320 Pfam PF00762 Ferrochelatase 5 319 1.8E-108 T 15-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 AM378_00300 6ddfb9055f7a71598c9dcb1507f1a772 320 Gene3D G3DSA:3.40.50.1400 7 320 1.1E-91 T 15-10-2018 AM378_00300 6ddfb9055f7a71598c9dcb1507f1a772 320 TIGRFAM TIGR00109 hemH: ferrochelatase 1 319 7.5E-110 T 15-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 AM378_00300 6ddfb9055f7a71598c9dcb1507f1a772 320 ProSitePatterns PS00534 Ferrochelatase signature. 189 207 - T 15-10-2018 IPR019772 Ferrochelatase, active site GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 AM378_00300 6ddfb9055f7a71598c9dcb1507f1a772 320 SUPERFAMILY SSF53800 3 320 1.31E-100 T 15-10-2018 AM378_00300 6ddfb9055f7a71598c9dcb1507f1a772 320 Gene3D G3DSA:3.40.50.1400 163 301 1.1E-91 T 15-10-2018 AM378_14625 4e010f307d389ef5b7dd2ba37c4c2272 158 Pfam PF03830 PTS system sorbose subfamily IIB component 4 148 6.2E-52 T 15-10-2018 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 AM378_14625 4e010f307d389ef5b7dd2ba37c4c2272 158 SUPERFAMILY SSF52728 3 153 2.49E-51 T 15-10-2018 IPR036667 Phosphotransferase system, sorbose subfamily IIB component superfamily GO:0005737|GO:0008982|GO:0009401 AM378_14625 4e010f307d389ef5b7dd2ba37c4c2272 158 Gene3D G3DSA:3.40.35.10 1 156 3.7E-55 T 15-10-2018 IPR036667 Phosphotransferase system, sorbose subfamily IIB component superfamily GO:0005737|GO:0008982|GO:0009401 AM378_14625 4e010f307d389ef5b7dd2ba37c4c2272 158 TIGRFAM TIGR00854 pts-sorbose: PTS system, mannose/fructose/sorbose family, IIB component 3 150 5.3E-65 T 15-10-2018 IPR018455 Phosphotransferase system, sorbose subfamily IIB component, subgroup GO:0005737|GO:0008982|GO:0009401 AM378_11360 eb472d8f46c7d9c9fdcaba347cc31522 140 SUPERFAMILY SSF55811 3 133 8.26E-33 T 15-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 AM378_11360 eb472d8f46c7d9c9fdcaba347cc31522 140 PRINTS PR00502 NUDIX hydrolase family signature 45 60 2.1E-8 T 15-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 AM378_11360 eb472d8f46c7d9c9fdcaba347cc31522 140 PRINTS PR00502 NUDIX hydrolase family signature 31 45 2.1E-8 T 15-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 AM378_11360 eb472d8f46c7d9c9fdcaba347cc31522 140 ProSitePatterns PS00893 Nudix box signature. 36 57 - T 15-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 AM378_11360 eb472d8f46c7d9c9fdcaba347cc31522 140 Pfam PF00293 NUDIX domain 5 127 5.4E-26 T 15-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 AM378_11360 eb472d8f46c7d9c9fdcaba347cc31522 140 Gene3D G3DSA:3.90.79.10 2 128 8.5E-37 T 15-10-2018 AM378_21115 3815d13bd6979e80fede31c56d8a45ef 88 Pfam PF07338 Protein of unknown function (DUF1471) 33 88 8.1E-19 T 15-10-2018 IPR010854 Domain of unknown function DUF1471 AM378_21115 3815d13bd6979e80fede31c56d8a45ef 88 SUPERFAMILY SSF159871 2 88 2.88E-23 T 15-10-2018 IPR036275 YdgH-like superfamily AM378_21115 3815d13bd6979e80fede31c56d8a45ef 88 Gene3D G3DSA:3.30.1660.10 19 88 5.1E-22 T 15-10-2018 IPR025543 Dodecin-like AM378_09660 5d0d3eb25cc638c402d33d75b8b923f0 89 TIGRFAM TIGR01402 fliQ: flagellar biosynthetic protein FliQ 1 88 1.1E-33 T 15-10-2018 IPR006305 Flagellar biosynthesis protein FliQ GO:0016021|GO:0044780 AM378_09660 5d0d3eb25cc638c402d33d75b8b923f0 89 PIRSF PIRSF004669 1 89 1.0E-32 T 15-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 AM378_09660 5d0d3eb25cc638c402d33d75b8b923f0 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 39 54 1.5E-23 T 15-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 AM378_09660 5d0d3eb25cc638c402d33d75b8b923f0 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 54 76 1.5E-23 T 15-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 AM378_09660 5d0d3eb25cc638c402d33d75b8b923f0 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 18 39 1.5E-23 T 15-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 AM378_09660 5d0d3eb25cc638c402d33d75b8b923f0 89 Pfam PF01313 Bacterial export proteins, family 3 6 77 2.7E-30 T 15-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 AM378_14360 949da67a0eee3bba72dd3e9f6054bb21 1991 Gene3D G3DSA:1.50.10.20 1497 1763 2.4E-9 T 15-10-2018 AM378_14360 949da67a0eee3bba72dd3e9f6054bb21 1991 Pfam PF11974 Alpha-2-macroglobulin MG1 domain 615 718 5.3E-24 T 15-10-2018 AM378_14360 949da67a0eee3bba72dd3e9f6054bb21 1991 Pfam PF00207 Alpha-2-macroglobulin family 1299 1377 6.2E-11 T 15-10-2018 IPR001599 Alpha-2-macroglobulin GO:0004866 AM378_14360 949da67a0eee3bba72dd3e9f6054bb21 1991 SMART SM01360 1298 1388 5.0E-19 T 15-10-2018 IPR001599 Alpha-2-macroglobulin GO:0004866 AM378_14360 949da67a0eee3bba72dd3e9f6054bb21 1991 Pfam PF01835 MG2 domain 729 822 9.4E-16 T 15-10-2018 IPR002890 Alpha-2-macroglobulin, N-terminal GO:0004866 AM378_14360 949da67a0eee3bba72dd3e9f6054bb21 1991 SUPERFAMILY SSF48239 1501 1760 1.96E-15 T 15-10-2018 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid AM378_14360 949da67a0eee3bba72dd3e9f6054bb21 1991 Pfam PF07703 Alpha-2-macroglobulin family N-terminal region 1093 1231 1.0E-14 T 15-10-2018 IPR011625 Alpha-2-macroglobulin, N-terminal 2 AM378_14360 949da67a0eee3bba72dd3e9f6054bb21 1991 SMART SM01359 1093 1232 2.2E-35 T 15-10-2018 IPR011625 Alpha-2-macroglobulin, N-terminal 2 AM378_16855 2f691a5708cfb0e07da79e9aea0640ff 194 Pfam PF02545 Maf-like protein 4 184 1.1E-57 T 15-10-2018 IPR003697 Maf-like protein GO:0047429 AM378_16855 2f691a5708cfb0e07da79e9aea0640ff 194 Gene3D G3DSA:3.90.950.10 2 190 5.6E-72 T 15-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like AM378_16855 2f691a5708cfb0e07da79e9aea0640ff 194 PIRSF PIRSF006305 1 190 3.1E-51 T 15-10-2018 IPR003697 Maf-like protein GO:0047429 AM378_16855 2f691a5708cfb0e07da79e9aea0640ff 194 TIGRFAM TIGR00172 maf: septum formation protein Maf 2 182 1.1E-62 T 15-10-2018 IPR003697 Maf-like protein GO:0047429 AM378_16855 2f691a5708cfb0e07da79e9aea0640ff 194 Hamap MF_00528 Septum formation protein Maf [maf]. 3 189 31.445 T 15-10-2018 IPR003697 Maf-like protein GO:0047429 AM378_16855 2f691a5708cfb0e07da79e9aea0640ff 194 SUPERFAMILY SSF52972 2 184 9.81E-60 T 15-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like AM378_01680 d267ad09b1cfb21b50e33f62a1be4c5c 174 Gene3D G3DSA:1.10.10.10 9 151 4.4E-27 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_01680 d267ad09b1cfb21b50e33f62a1be4c5c 174 SUPERFAMILY SSF46785 6 144 7.87E-25 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM378_01680 d267ad09b1cfb21b50e33f62a1be4c5c 174 SMART SM00347 28 129 5.6E-13 T 15-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AM378_01680 d267ad09b1cfb21b50e33f62a1be4c5c 174 Pfam PF13463 Winged helix DNA-binding domain 35 102 7.0E-8 T 15-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AM378_22035 fcd3c9512f3d8704d52dec6fb2ee7d1e 375 Pfam PF00465 Iron-containing alcohol dehydrogenase 11 303 1.2E-68 T 15-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 AM378_22035 fcd3c9512f3d8704d52dec6fb2ee7d1e 375 SUPERFAMILY SSF56796 8 345 6.67E-63 T 15-10-2018 AM378_22035 fcd3c9512f3d8704d52dec6fb2ee7d1e 375 Gene3D G3DSA:3.40.50.1970 1 182 1.6E-38 T 15-10-2018 AM378_22035 fcd3c9512f3d8704d52dec6fb2ee7d1e 375 Gene3D G3DSA:1.20.1090.10 183 332 7.3E-25 T 15-10-2018 AM378_21610 96bf0163bb54f22aef87ce2f81e4eaaf 128 Gene3D G3DSA:3.30.1330.40 1 128 6.8E-47 T 15-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 AM378_21610 96bf0163bb54f22aef87ce2f81e4eaaf 128 ProSitePatterns PS01094 Uncharacterized protein family UPF0076 signature. 103 121 - T 15-10-2018 IPR019897 RidA, conserved site Reactome: R-HSA-8849175 AM378_21610 96bf0163bb54f22aef87ce2f81e4eaaf 128 Pfam PF01042 Endoribonuclease L-PSP 8 126 2.6E-43 T 15-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 AM378_21610 96bf0163bb54f22aef87ce2f81e4eaaf 128 SUPERFAMILY SSF55298 5 127 6.75E-42 T 15-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 AM378_21610 96bf0163bb54f22aef87ce2f81e4eaaf 128 TIGRFAM TIGR00004 TIGR00004: reactive intermediate/imine deaminase 3 126 6.8E-52 T 15-10-2018 IPR006056 RidA family Reactome: R-HSA-8849175 AM378_13020 fc26dfd4f97c4a16df30bd6956264cff 687 SUPERFAMILY SSF56024 315 497 1.95E-57 T 15-10-2018 AM378_13020 fc26dfd4f97c4a16df30bd6956264cff 687 Pfam PF13089 Polyphosphate kinase N-terminal domain 7 109 2.7E-31 T 15-10-2018 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 AM378_13020 fc26dfd4f97c4a16df30bd6956264cff 687 Gene3D G3DSA:3.30.1840.10 110 307 6.7E-75 T 15-10-2018 IPR036830 Polyphosphate kinase middle domain superfamily KEGG: 00190+2.7.4.1 AM378_13020 fc26dfd4f97c4a16df30bd6956264cff 687 SUPERFAMILY SSF56024 500 681 4.26E-69 T 15-10-2018 AM378_13020 fc26dfd4f97c4a16df30bd6956264cff 687 Gene3D G3DSA:1.20.58.310 9 109 6.8E-38 T 15-10-2018 AM378_13020 fc26dfd4f97c4a16df30bd6956264cff 687 SUPERFAMILY SSF140356 3 105 9.55E-34 T 15-10-2018 IPR036832 Polyphosphate kinase N-terminal domain superfamily KEGG: 00190+2.7.4.1 AM378_13020 fc26dfd4f97c4a16df30bd6956264cff 687 TIGRFAM TIGR03705 poly_P_kin: polyphosphate kinase 1 7 677 1.7E-259 T 15-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 AM378_13020 fc26dfd4f97c4a16df30bd6956264cff 687 Pfam PF13090 Polyphosphate kinase C-terminal domain 331 676 3.1E-146 T 15-10-2018 IPR025200 Polyphosphate kinase C-terminal domain KEGG: 00190+2.7.4.1 AM378_13020 fc26dfd4f97c4a16df30bd6956264cff 687 SUPERFAMILY SSF143724 107 313 2.55E-59 T 15-10-2018 AM378_13020 fc26dfd4f97c4a16df30bd6956264cff 687 Gene3D G3DSA:3.30.870.10 317 499 1.8E-75 T 15-10-2018 AM378_13020 fc26dfd4f97c4a16df30bd6956264cff 687 Hamap MF_00347 Polyphosphate kinase [ppk]. 4 681 27.408 T 15-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 AM378_13020 fc26dfd4f97c4a16df30bd6956264cff 687 Pfam PF02503 Polyphosphate kinase middle domain 119 319 4.4E-42 T 15-10-2018 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 AM378_13020 fc26dfd4f97c4a16df30bd6956264cff 687 Gene3D G3DSA:3.30.870.10 500 686 1.3E-72 T 15-10-2018 AM378_13020 fc26dfd4f97c4a16df30bd6956264cff 687 PIRSF PIRSF015589 1 686 1.1E-243 T 15-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 AM378_20140 11c4e570f835f8adbc5cc528caa48159 238 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 118 207 1.1E-9 T 15-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AM378_20140 11c4e570f835f8adbc5cc528caa48159 238 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 127 201 2.0E-12 T 15-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AM378_20140 11c4e570f835f8adbc5cc528caa48159 238 Pfam PF00702 haloacid dehalogenase-like hydrolase 12 201 1.8E-16 T 15-10-2018 AM378_20140 11c4e570f835f8adbc5cc528caa48159 238 SUPERFAMILY SSF56784 12 238 4.45E-42 T 15-10-2018 IPR036412 HAD-like superfamily AM378_20140 11c4e570f835f8adbc5cc528caa48159 238 Gene3D G3DSA:1.20.120.1600 24 110 2.1E-62 T 15-10-2018 AM378_20140 11c4e570f835f8adbc5cc528caa48159 238 Gene3D G3DSA:3.40.50.1000 12 231 2.1E-62 T 15-10-2018 IPR023214 HAD superfamily AM378_19770 b59fc48d7b7a593ebcb361705e4ad49e 347 SUPERFAMILY SSF111369 43 114 2.09E-9 T 15-10-2018 AM378_19770 b59fc48d7b7a593ebcb361705e4ad49e 347 Gene3D G3DSA:1.10.287.470 77 110 1.1E-14 T 15-10-2018 AM378_19770 b59fc48d7b7a593ebcb361705e4ad49e 347 Gene3D G3DSA:1.10.287.470 111 179 5.5E-7 T 15-10-2018 AM378_19770 b59fc48d7b7a593ebcb361705e4ad49e 347 Gene3D G3DSA:2.40.50.100 44 76 1.1E-14 T 15-10-2018 AM378_19770 b59fc48d7b7a593ebcb361705e4ad49e 347 SUPERFAMILY SSF111369 160 281 1.57E-15 T 15-10-2018 AM378_19770 b59fc48d7b7a593ebcb361705e4ad49e 347 Gene3D G3DSA:2.40.30.170 224 343 1.3E-34 T 15-10-2018 AM378_19770 b59fc48d7b7a593ebcb361705e4ad49e 347 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 42 286 4.0E-17 T 15-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AM378_19770 b59fc48d7b7a593ebcb361705e4ad49e 347 Pfam PF00529 HlyD membrane-fusion protein of T1SS 16 339 5.3E-7 T 15-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AM378_03615 63eb12b78d5b56e88392104186db2c5b 257 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM378_03615 63eb12b78d5b56e88392104186db2c5b 257 Pfam PF00005 ABC transporter 28 161 3.2E-31 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM378_03615 63eb12b78d5b56e88392104186db2c5b 257 SMART SM00382 37 211 1.7E-17 T 15-10-2018 IPR003593 AAA+ ATPase domain AM378_03615 63eb12b78d5b56e88392104186db2c5b 257 Gene3D G3DSA:3.40.50.300 13 247 3.7E-62 T 15-10-2018 AM378_03615 63eb12b78d5b56e88392104186db2c5b 257 SUPERFAMILY SSF52540 13 214 1.52E-64 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_20605 f19776cbf3ebba07f6161b5479fa2bdd 181 SMART SM00738 6 115 2.0E-50 T 15-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 AM378_20605 f19776cbf3ebba07f6161b5479fa2bdd 181 Gene3D G3DSA:3.30.70.940 1 123 6.5E-48 T 15-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 AM378_20605 f19776cbf3ebba07f6161b5479fa2bdd 181 Pfam PF02357 Transcription termination factor nusG 7 112 2.1E-27 T 15-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 AM378_20605 f19776cbf3ebba07f6161b5479fa2bdd 181 TIGRFAM TIGR00922 nusG: transcription termination/antitermination factor NusG 9 180 5.5E-71 T 15-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 AM378_20605 f19776cbf3ebba07f6161b5479fa2bdd 181 SUPERFAMILY SSF50104 125 180 9.03E-20 T 15-10-2018 IPR008991 Translation protein SH3-like domain superfamily AM378_20605 f19776cbf3ebba07f6161b5479fa2bdd 181 Gene3D G3DSA:2.30.30.30 124 180 1.5E-26 T 15-10-2018 IPR014722 Ribosomal protein L2, domain 2 AM378_20605 f19776cbf3ebba07f6161b5479fa2bdd 181 ProSitePatterns PS01014 Transcription termination factor nusG signature. 164 173 - T 15-10-2018 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site AM378_20605 f19776cbf3ebba07f6161b5479fa2bdd 181 SMART SM00739 127 154 1.6E-6 T 15-10-2018 IPR005824 KOW AM378_20605 f19776cbf3ebba07f6161b5479fa2bdd 181 Hamap MF_00948 Transcription termination/antitermination protein NusG [nusG]. 6 181 24.694 T 15-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 AM378_20605 f19776cbf3ebba07f6161b5479fa2bdd 181 PRINTS PR00338 Transcription termination factor NUSG signature 61 73 1.9E-21 T 15-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 AM378_20605 f19776cbf3ebba07f6161b5479fa2bdd 181 PRINTS PR00338 Transcription termination factor NUSG signature 139 154 1.9E-21 T 15-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 AM378_20605 f19776cbf3ebba07f6161b5479fa2bdd 181 PRINTS PR00338 Transcription termination factor NUSG signature 157 173 1.9E-21 T 15-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 AM378_20605 f19776cbf3ebba07f6161b5479fa2bdd 181 SUPERFAMILY SSF82679 6 116 3.4E-40 T 15-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 AM378_20605 f19776cbf3ebba07f6161b5479fa2bdd 181 Pfam PF00467 KOW motif 130 162 9.7E-8 T 15-10-2018 IPR005824 KOW AM378_00440 345f66e261632ea6ae5abfe7f12cd0c7 261 TIGRFAM TIGR03214 ura-cupin: putative allantoin catabolism protein 3 260 4.5E-107 T 15-10-2018 IPR017627 Conserved hypothetical protein CHP03214, putative allantoin-urate catabolism protein KEGG: 00230+3.5.3.26|MetaCyc: PWY-5692|MetaCyc: PWY-5698 AM378_00440 345f66e261632ea6ae5abfe7f12cd0c7 261 SUPERFAMILY SSF51182 16 259 3.13E-60 T 15-10-2018 IPR011051 RmlC-like cupin domain superfamily AM378_00440 345f66e261632ea6ae5abfe7f12cd0c7 261 Gene3D G3DSA:2.60.120.10 1 260 2.9E-88 T 15-10-2018 IPR014710 RmlC-like jelly roll fold AM378_00440 345f66e261632ea6ae5abfe7f12cd0c7 261 Pfam PF07883 Cupin domain 185 246 1.2E-7 T 15-10-2018 IPR013096 Cupin 2, conserved barrel AM378_12840 254cf1044b4ba56e7cf06354bb211418 350 Gene3D G3DSA:3.30.530.50 101 215 1.4E-45 T 15-10-2018 AM378_12840 254cf1044b4ba56e7cf06354bb211418 350 Gene3D G3DSA:3.30.310.170 228 350 1.7E-51 T 15-10-2018 AM378_12840 254cf1044b4ba56e7cf06354bb211418 350 Pfam PF06804 NlpB/DapX lipoprotein 41 344 1.7E-113 T 15-10-2018 IPR010653 NlpB/DapX lipoprotein AM378_12840 254cf1044b4ba56e7cf06354bb211418 350 Hamap MF_00924 Outer membrane protein assembly factor BamC [bamC]. 9 345 38.307 T 15-10-2018 IPR014524 Outer membrane protein assembly factor BamC AM378_12840 254cf1044b4ba56e7cf06354bb211418 350 PIRSF PIRSF026343 9 347 1.3E-120 T 15-10-2018 IPR014524 Outer membrane protein assembly factor BamC AM378_03860 bfd782b73740ea4df8608b651f703e5a 1026 SUPERFAMILY SSF82866 785 1005 5.36E-44 T 15-10-2018 AM378_03860 bfd782b73740ea4df8608b651f703e5a 1026 SUPERFAMILY SSF82693 137 321 1.02E-17 T 15-10-2018 AM378_03860 bfd782b73740ea4df8608b651f703e5a 1026 Gene3D G3DSA:3.30.70.1430 40 794 1.5E-284 T 15-10-2018 AM378_03860 bfd782b73740ea4df8608b651f703e5a 1026 Gene3D G3DSA:3.30.2090.10 698 786 1.5E-284 T 15-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AM378_03860 bfd782b73740ea4df8608b651f703e5a 1026 SUPERFAMILY SSF82714 183 264 1.7E-18 T 15-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AM378_03860 bfd782b73740ea4df8608b651f703e5a 1026 Pfam PF00873 AcrB/AcrD/AcrF family 4 1003 9.6E-267 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AM378_03860 bfd782b73740ea4df8608b651f703e5a 1026 SUPERFAMILY SSF82714 701 784 9.02E-17 T 15-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AM378_03860 bfd782b73740ea4df8608b651f703e5a 1026 SUPERFAMILY SSF82693 41 130 1.13E-22 T 15-10-2018 AM378_03860 bfd782b73740ea4df8608b651f703e5a 1026 Gene3D G3DSA:3.30.70.1440 648 842 1.5E-284 T 15-10-2018 AM378_03860 bfd782b73740ea4df8608b651f703e5a 1026 Gene3D G3DSA:3.30.2090.10 178 268 1.5E-284 T 15-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AM378_03860 bfd782b73740ea4df8608b651f703e5a 1026 Gene3D G3DSA:3.30.70.1430 555 647 1.5E-284 T 15-10-2018 AM378_03860 bfd782b73740ea4df8608b651f703e5a 1026 SUPERFAMILY SSF82693 553 650 6.8E-16 T 15-10-2018 AM378_03860 bfd782b73740ea4df8608b651f703e5a 1026 Gene3D G3DSA:1.20.1640.10 10 500 1.5E-284 T 15-10-2018 AM378_03860 bfd782b73740ea4df8608b651f703e5a 1026 Gene3D G3DSA:1.20.1640.10 501 1000 1.5E-284 T 15-10-2018 AM378_03860 bfd782b73740ea4df8608b651f703e5a 1026 SUPERFAMILY SSF82866 299 489 4.32E-47 T 15-10-2018 AM378_03860 bfd782b73740ea4df8608b651f703e5a 1026 PRINTS PR00702 Acriflavin resistance protein family signature 329 352 4.3E-72 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AM378_03860 bfd782b73740ea4df8608b651f703e5a 1026 PRINTS PR00702 Acriflavin resistance protein family signature 540 557 4.3E-72 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AM378_03860 bfd782b73740ea4df8608b651f703e5a 1026 PRINTS PR00702 Acriflavin resistance protein family signature 437 460 4.3E-72 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AM378_03860 bfd782b73740ea4df8608b651f703e5a 1026 PRINTS PR00702 Acriflavin resistance protein family signature 356 377 4.3E-72 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AM378_03860 bfd782b73740ea4df8608b651f703e5a 1026 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 4.3E-72 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AM378_03860 bfd782b73740ea4df8608b651f703e5a 1026 PRINTS PR00702 Acriflavin resistance protein family signature 384 408 4.3E-72 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AM378_03860 bfd782b73740ea4df8608b651f703e5a 1026 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 4.3E-72 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AM378_03860 bfd782b73740ea4df8608b651f703e5a 1026 PRINTS PR00702 Acriflavin resistance protein family signature 462 485 4.3E-72 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AM378_03860 bfd782b73740ea4df8608b651f703e5a 1026 Gene3D G3DSA:3.30.70.1320 134 325 1.5E-284 T 15-10-2018 AM378_22740 48c9e14173361218bac64dd983c7af2b 200 Gene3D G3DSA:3.20.19.10 1 180 3.0E-79 T 15-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 AM378_22740 48c9e14173361218bac64dd983c7af2b 200 Hamap MF_01031 3-isopropylmalate dehydratase small subunit [leuD]. 1 199 45.357 T 15-10-2018 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 AM378_22740 48c9e14173361218bac64dd983c7af2b 200 SUPERFAMILY SSF52016 3 194 2.35E-61 T 15-10-2018 AM378_22740 48c9e14173361218bac64dd983c7af2b 200 TIGRFAM TIGR00171 leuD: 3-isopropylmalate dehydratase, small subunit 2 188 9.5E-99 T 15-10-2018 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 AM378_22740 48c9e14173361218bac64dd983c7af2b 200 Pfam PF00694 Aconitase C-terminal domain 2 125 2.9E-40 T 15-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 AM378_12050 a5582da061b015b4de402d779b7bf741 678 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 285 489 1.6E-10 T 15-10-2018 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 AM378_12050 a5582da061b015b4de402d779b7bf741 678 SUPERFAMILY SSF52833 554 669 3.86E-12 T 15-10-2018 IPR036249 Thioredoxin-like superfamily AM378_12050 a5582da061b015b4de402d779b7bf741 678 Pfam PF13899 Thioredoxin-like 563 648 7.9E-13 T 15-10-2018 AM378_12050 a5582da061b015b4de402d779b7bf741 678 Pfam PF11412 Disulphide bond corrector protein DsbC 42 146 1.5E-16 T 15-10-2018 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain AM378_12050 a5582da061b015b4de402d779b7bf741 678 Gene3D G3DSA:3.40.30.10 552 649 1.3E-11 T 15-10-2018 AM378_23460 9d9325acfb35ea659a0f81413feee60a 247 SUPERFAMILY SSF53098 5 183 1.16E-54 T 15-10-2018 IPR012337 Ribonuclease H-like superfamily AM378_23460 9d9325acfb35ea659a0f81413feee60a 247 Pfam PF00929 Exonuclease 9 175 5.9E-41 T 15-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III AM378_23460 9d9325acfb35ea659a0f81413feee60a 247 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 6 225 4.4E-90 T 15-10-2018 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM378_23460 9d9325acfb35ea659a0f81413feee60a 247 TIGRFAM TIGR01406 dnaQ_proteo: DNA polymerase III, epsilon subunit 7 242 1.1E-94 T 15-10-2018 IPR006309 DNA polymerase 3, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM378_23460 9d9325acfb35ea659a0f81413feee60a 247 Gene3D G3DSA:3.30.420.10 2 191 7.0E-61 T 15-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AM378_23460 9d9325acfb35ea659a0f81413feee60a 247 Gene3D G3DSA:3.20.20.140 208 247 4.1E-7 T 15-10-2018 AM378_23460 9d9325acfb35ea659a0f81413feee60a 247 SMART SM00479 7 184 3.7E-52 T 15-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III AM378_06500 953d1ec327ef374fdf37a68ffb7fe700 280 Gene3D G3DSA:1.10.1790.10 169 277 6.5E-32 T 15-10-2018 AM378_06500 953d1ec327ef374fdf37a68ffb7fe700 280 SUPERFAMILY SSF63520 176 274 2.62E-22 T 15-10-2018 IPR036634 PRD domain superfamily GO:0006355 AM378_06500 953d1ec327ef374fdf37a68ffb7fe700 280 Pfam PF00874 PRD domain 182 273 4.8E-14 T 15-10-2018 IPR011608 PRD domain GO:0006355 AM378_06500 953d1ec327ef374fdf37a68ffb7fe700 280 Pfam PF00874 PRD domain 77 161 2.6E-20 T 15-10-2018 IPR011608 PRD domain GO:0006355 AM378_06500 953d1ec327ef374fdf37a68ffb7fe700 280 Pfam PF03123 CAT RNA binding domain 1 54 2.5E-21 T 15-10-2018 IPR004341 CAT RNA-binding domain GO:0003723 AM378_06500 953d1ec327ef374fdf37a68ffb7fe700 280 SMART SM01061 1 60 1.3E-24 T 15-10-2018 IPR004341 CAT RNA-binding domain GO:0003723 AM378_06500 953d1ec327ef374fdf37a68ffb7fe700 280 SUPERFAMILY SSF50151 1 53 4.32E-16 T 15-10-2018 IPR036650 CAT RNA-binding domain superfamily GO:0003723 AM378_06500 953d1ec327ef374fdf37a68ffb7fe700 280 SUPERFAMILY SSF63520 59 164 1.57E-27 T 15-10-2018 IPR036634 PRD domain superfamily GO:0006355 AM378_06500 953d1ec327ef374fdf37a68ffb7fe700 280 Gene3D G3DSA:1.10.1790.10 65 166 5.1E-33 T 15-10-2018 AM378_06500 953d1ec327ef374fdf37a68ffb7fe700 280 Gene3D G3DSA:2.30.24.10 1 54 2.1E-20 T 15-10-2018 IPR036650 CAT RNA-binding domain superfamily GO:0003723 AM378_12825 48b15da76dc7110a6eddc775a911caec 670 Pfam PF13718 GNAT acetyltransferase 2 370 480 5.1E-14 T 15-10-2018 IPR000182 GNAT domain AM378_12825 48b15da76dc7110a6eddc775a911caec 670 SUPERFAMILY SSF55729 366 515 3.67E-14 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase AM378_12825 48b15da76dc7110a6eddc775a911caec 670 Gene3D G3DSA:3.40.630.30 329 532 8.4E-73 T 15-10-2018 AM378_12825 48b15da76dc7110a6eddc775a911caec 670 Hamap MF_01886 tRNA(Met) cytidine acetyltransferase TmcA [tmcA]. 13 654 49.067 T 15-10-2018 IPR024914 tRNA(Met) cytidine acetyltransferase TmcA GO:0000049|GO:0002101|GO:0051391|GO:0051392 AM378_12825 48b15da76dc7110a6eddc775a911caec 670 Gene3D G3DSA:1.20.120.890 533 670 4.5E-50 T 15-10-2018 IPR038321 TmcA, C-terminal domain superfamily AM378_12825 48b15da76dc7110a6eddc775a911caec 670 Pfam PF08351 Domain of unknown function (DUF1726) 63 146 5.0E-6 T 15-10-2018 IPR013562 tRNA(Met) cytidine acetyltransferase TmcA, N-terminal Reactome: R-HSA-6790901 AM378_12825 48b15da76dc7110a6eddc775a911caec 670 Pfam PF17176 tRNA-binding domain 538 657 1.1E-42 T 15-10-2018 IPR033442 tRNA(Met) cytidine acetyltransferase TmcA, tRNA-binding domain AM378_12825 48b15da76dc7110a6eddc775a911caec 670 Gene3D G3DSA:3.40.50.12320 188 328 6.9E-46 T 15-10-2018 AM378_12825 48b15da76dc7110a6eddc775a911caec 670 Pfam PF05127 Helicase 192 338 1.1E-36 T 15-10-2018 IPR007807 Helicase domain Reactome: R-HSA-6790901 AM378_12825 48b15da76dc7110a6eddc775a911caec 670 Gene3D G3DSA:3.40.50.11040 1 186 8.7E-65 T 15-10-2018 AM378_12825 48b15da76dc7110a6eddc775a911caec 670 SUPERFAMILY SSF52540 153 286 1.91E-8 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_20505 ca149afb02c388ee70d3f5c6d5a3eec9 729 Hamap MF_01621 Fatty acid oxidation complex subunit alpha [fadB]. 1 715 53.131 T 15-10-2018 IPR012799 Fatty oxidation complex, alpha subunit FadB GO:0003857|GO:0004165|GO:0004300|GO:0008692|GO:0009062|GO:0036125 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35+5.3.3.8|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5137|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6837|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-7291|MetaCyc: PWY-7292|MetaCyc: PWY-7307|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 AM378_20505 ca149afb02c388ee70d3f5c6d5a3eec9 729 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 627 686 1.7E-4 T 15-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 AM378_20505 ca149afb02c388ee70d3f5c6d5a3eec9 729 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 496 592 3.3E-25 T 15-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 AM378_20505 ca149afb02c388ee70d3f5c6d5a3eec9 729 Gene3D G3DSA:1.10.1040.50 497 709 1.0E-74 T 15-10-2018 AM378_20505 ca149afb02c388ee70d3f5c6d5a3eec9 729 SUPERFAMILY SSF48179 495 638 1.19E-31 T 15-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 AM378_20505 ca149afb02c388ee70d3f5c6d5a3eec9 729 SUPERFAMILY SSF52096 2 303 7.41E-72 T 15-10-2018 IPR029045 ClpP/crotonase-like domain superfamily AM378_20505 ca149afb02c388ee70d3f5c6d5a3eec9 729 ProSitePatterns PS00067 3-hydroxyacyl-CoA dehydrogenase signature. 493 517 - T 15-10-2018 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 AM378_20505 ca149afb02c388ee70d3f5c6d5a3eec9 729 Gene3D G3DSA:3.40.50.720 314 496 6.3E-66 T 15-10-2018 AM378_20505 ca149afb02c388ee70d3f5c6d5a3eec9 729 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 106 126 - T 15-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 AM378_20505 ca149afb02c388ee70d3f5c6d5a3eec9 729 SUPERFAMILY SSF51735 314 495 2.91E-56 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily AM378_20505 ca149afb02c388ee70d3f5c6d5a3eec9 729 TIGRFAM TIGR02437 FadB: fatty oxidation complex, alpha subunit FadB 1 714 0.0 T 15-10-2018 IPR012799 Fatty oxidation complex, alpha subunit FadB GO:0003857|GO:0004165|GO:0004300|GO:0008692|GO:0009062|GO:0036125 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35+5.3.3.8|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5137|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6837|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-7291|MetaCyc: PWY-7292|MetaCyc: PWY-7307|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 AM378_20505 ca149afb02c388ee70d3f5c6d5a3eec9 729 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 316 494 5.4E-60 T 15-10-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 AM378_20505 ca149afb02c388ee70d3f5c6d5a3eec9 729 Pfam PF00378 Enoyl-CoA hydratase/isomerase 15 206 8.9E-43 T 15-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 AM378_20505 ca149afb02c388ee70d3f5c6d5a3eec9 729 SUPERFAMILY SSF48179 622 714 4.68E-23 T 15-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 AM378_20505 ca149afb02c388ee70d3f5c6d5a3eec9 729 Gene3D G3DSA:3.90.226.10 1 312 1.7E-97 T 15-10-2018 AM378_03760 16a2b4e11c3dc0cdb6d629d999cf774b 394 Gene3D G3DSA:3.40.50.150 181 394 8.6E-72 T 15-10-2018 AM378_03760 16a2b4e11c3dc0cdb6d629d999cf774b 394 Gene3D G3DSA:2.30.130.10 1 70 6.9E-31 T 15-10-2018 IPR036974 PUA domain superfamily GO:0003723 AM378_03760 16a2b4e11c3dc0cdb6d629d999cf774b 394 SUPERFAMILY SSF53335 77 390 1.79E-71 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM378_03760 16a2b4e11c3dc0cdb6d629d999cf774b 394 Gene3D G3DSA:3.30.750.80 71 179 4.4E-35 T 15-10-2018 AM378_03760 16a2b4e11c3dc0cdb6d629d999cf774b 394 SUPERFAMILY SSF88697 2 70 6.05E-17 T 15-10-2018 IPR015947 PUA-like superfamily AM378_03760 16a2b4e11c3dc0cdb6d629d999cf774b 394 SMART SM00359 1 86 9.8E-16 T 15-10-2018 IPR002478 PUA domain GO:0003723 AM378_03760 16a2b4e11c3dc0cdb6d629d999cf774b 394 Hamap MF_01857 Ribosomal RNA large subunit methyltransferase I [rlmI]. 1 394 67.595 T 15-10-2018 IPR023542 rRNA large subunit methyltransferase I GO:0008649 AM378_03760 16a2b4e11c3dc0cdb6d629d999cf774b 394 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 178 369 7.8E-29 T 15-10-2018 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 AM378_13970 3b39e4f95d1ae5f074ec6b14e9493ed0 323 TIGRFAM TIGR04171 RNR_1b_NrdF: ribonucleoside-diphosphate reductase, class 1b, beta subunit 11 323 1.2E-145 T 15-10-2018 IPR026494 Ribonucleoside reductase subunit beta, NrdF GO:0005971|GO:0009263 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AM378_13970 3b39e4f95d1ae5f074ec6b14e9493ed0 323 SUPERFAMILY SSF47240 8 323 4.57E-105 T 15-10-2018 IPR009078 Ferritin-like superfamily AM378_13970 3b39e4f95d1ae5f074ec6b14e9493ed0 323 PIRSF PIRSF000355 2 320 3.3E-79 T 15-10-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AM378_13970 3b39e4f95d1ae5f074ec6b14e9493ed0 323 Gene3D G3DSA:1.10.620.20 7 292 4.7E-112 T 15-10-2018 IPR012348 Ribonucleotide reductase-like GO:0016491|GO:0055114 Reactome: R-HSA-499943 AM378_13970 3b39e4f95d1ae5f074ec6b14e9493ed0 323 ProSitePatterns PS00368 Ribonucleotide reductase small subunit signature. 101 117 - T 15-10-2018 IPR030475 Ribonucleotide reductase small subunit, acitve site KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AM378_13970 3b39e4f95d1ae5f074ec6b14e9493ed0 323 Pfam PF00268 Ribonucleotide reductase, small chain 13 282 2.5E-85 T 15-10-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AM378_15205 8e4949cf2b74dbe98ba3ed503af974bf 589 Gene3D G3DSA:1.10.3720.10 343 588 7.0E-29 T 15-10-2018 IPR035906 MetI-like superfamily AM378_15205 8e4949cf2b74dbe98ba3ed503af974bf 589 SUPERFAMILY SSF161098 300 586 7.06E-38 T 15-10-2018 IPR035906 MetI-like superfamily AM378_15205 8e4949cf2b74dbe98ba3ed503af974bf 589 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 381 577 1.7E-11 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AM378_15205 8e4949cf2b74dbe98ba3ed503af974bf 589 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 80 275 6.3E-12 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AM378_15205 8e4949cf2b74dbe98ba3ed503af974bf 589 Gene3D G3DSA:1.10.3720.10 14 283 1.9E-45 T 15-10-2018 IPR035906 MetI-like superfamily AM378_15205 8e4949cf2b74dbe98ba3ed503af974bf 589 SUPERFAMILY SSF161098 5 282 3.4E-47 T 15-10-2018 IPR035906 MetI-like superfamily AM378_22850 9e493932cf282b84fbedddcb319c7f65 306 SUPERFAMILY SSF52440 3 96 4.7E-28 T 15-10-2018 IPR016185 Pre-ATP-grasp domain superfamily AM378_22850 9e493932cf282b84fbedddcb319c7f65 306 Gene3D G3DSA:3.30.1490.20 111 183 2.6E-82 T 15-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 AM378_22850 9e493932cf282b84fbedddcb319c7f65 306 SUPERFAMILY SSF56059 97 302 1.77E-60 T 15-10-2018 AM378_22850 9e493932cf282b84fbedddcb319c7f65 306 Gene3D G3DSA:3.30.470.20 85 301 2.6E-82 T 15-10-2018 AM378_22850 9e493932cf282b84fbedddcb319c7f65 306 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 3 306 36.159 T 15-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 AM378_22850 9e493932cf282b84fbedddcb319c7f65 306 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 63 74 - T 15-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 AM378_22850 9e493932cf282b84fbedddcb319c7f65 306 Pfam PF01820 D-ala D-ala ligase N-terminus 4 86 2.3E-16 T 15-10-2018 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 AM378_22850 9e493932cf282b84fbedddcb319c7f65 306 ProSitePatterns PS00844 D-alanine--D-alanine ligase signature 2. 248 276 - T 15-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 AM378_22850 9e493932cf282b84fbedddcb319c7f65 306 PIRSF PIRSF039102 1 44 1.4E-7 T 15-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 AM378_22850 9e493932cf282b84fbedddcb319c7f65 306 PIRSF PIRSF039102 38 306 2.0E-91 T 15-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 AM378_22850 9e493932cf282b84fbedddcb319c7f65 306 Gene3D G3DSA:3.40.50.20 1 84 5.1E-31 T 15-10-2018 AM378_22850 9e493932cf282b84fbedddcb319c7f65 306 Pfam PF07478 D-ala D-ala ligase C-terminus 103 303 6.1E-66 T 15-10-2018 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 AM378_22850 9e493932cf282b84fbedddcb319c7f65 306 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 4 305 1.2E-107 T 15-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 AM378_22570 a524a3e7819afc404c7870ca59eddc4e 321 Gene3D G3DSA:3.30.60.140 279 317 1.8E-9 T 15-10-2018 AM378_22570 a524a3e7819afc404c7870ca59eddc4e 321 Pfam PF05141 Pyoverdine/dityrosine biosynthesis protein 46 301 1.4E-81 T 15-10-2018 IPR007817 Pyoverdine biosynthesis AM378_22570 a524a3e7819afc404c7870ca59eddc4e 321 PIRSF PIRSF037196 1 321 3.1E-158 T 15-10-2018 IPR017133 Pyoverdine chromophore biosynthesis protein PvcA AM378_07235 fe73b6a9ec614cf126328914b9cf9925 439 Gene3D G3DSA:3.30.9.10 130 355 3.5E-50 T 15-10-2018 AM378_07235 fe73b6a9ec614cf126328914b9cf9925 439 Pfam PF01266 FAD dependent oxidoreductase 37 393 7.2E-38 T 15-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 AM378_07235 fe73b6a9ec614cf126328914b9cf9925 439 Gene3D G3DSA:3.50.50.60 38 394 3.5E-50 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AM378_07235 fe73b6a9ec614cf126328914b9cf9925 439 SUPERFAMILY SSF51905 36 401 2.78E-31 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AM378_11415 5f1bb4b77015f9537049f0fdba9a3bfc 236 SMART SM00014 95 210 1.7E-14 T 15-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AM378_11415 5f1bb4b77015f9537049f0fdba9a3bfc 236 Hamap MF_01945 Lipid A 1-diphosphate synthase [lpxT]. 2 233 42.368 T 15-10-2018 IPR032908 Lipid A 1-diphosphate synthase GO:0005886|GO:0043165|GO:0050380 AM378_11415 5f1bb4b77015f9537049f0fdba9a3bfc 236 Gene3D G3DSA:1.20.144.10 123 226 7.0E-9 T 15-10-2018 AM378_11415 5f1bb4b77015f9537049f0fdba9a3bfc 236 SUPERFAMILY SSF48317 6 213 1.57E-22 T 15-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily AM378_11415 5f1bb4b77015f9537049f0fdba9a3bfc 236 Pfam PF01569 PAP2 superfamily 110 208 4.8E-9 T 15-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AM378_07760 fcc61e7b28e09f5654da89bcd8690da1 335 SMART SM00382 28 171 1.0E-10 T 15-10-2018 IPR003593 AAA+ ATPase domain AM378_07760 fcc61e7b28e09f5654da89bcd8690da1 335 SUPERFAMILY SSF52540 8 243 3.1E-64 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_07760 fcc61e7b28e09f5654da89bcd8690da1 335 Pfam PF02954 Bacterial regulatory protein, Fis family 286 323 1.3E-7 T 15-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AM378_07760 fcc61e7b28e09f5654da89bcd8690da1 335 Pfam PF00158 Sigma-54 interaction domain 9 170 4.7E-61 T 15-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 AM378_07760 fcc61e7b28e09f5654da89bcd8690da1 335 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 222 231 - T 15-10-2018 IPR025944 Sigma-54 interaction domain, conserved site AM378_07760 fcc61e7b28e09f5654da89bcd8690da1 335 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 307 327 7.7E-7 T 15-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AM378_07760 fcc61e7b28e09f5654da89bcd8690da1 335 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 290 307 7.7E-7 T 15-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AM378_07760 fcc61e7b28e09f5654da89bcd8690da1 335 TIGRFAM TIGR02974 phageshock_pspF: psp operon transcriptional activator 8 324 5.2E-161 T 15-10-2018 IPR014317 Transcription activator PspF AM378_07760 fcc61e7b28e09f5654da89bcd8690da1 335 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 94 109 - T 15-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AM378_07760 fcc61e7b28e09f5654da89bcd8690da1 335 Gene3D G3DSA:1.10.8.60 180 263 6.3E-27 T 15-10-2018 AM378_07760 fcc61e7b28e09f5654da89bcd8690da1 335 Gene3D G3DSA:1.10.10.60 275 328 2.5E-7 T 15-10-2018 AM378_07760 fcc61e7b28e09f5654da89bcd8690da1 335 SUPERFAMILY SSF46689 222 325 2.37E-6 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AM378_07760 fcc61e7b28e09f5654da89bcd8690da1 335 Gene3D G3DSA:3.40.50.300 1 179 5.5E-58 T 15-10-2018 AM378_14465 2d43db83ba706fd27379781906fd9ca4 1183 TIGRFAM TIGR00609 recB: exodeoxyribonuclease V, beta subunit 9 1172 0.0 T 15-10-2018 IPR004586 RecBCD enzyme subunit RecB GO:0005524|GO:0006281|GO:0008854 AM378_14465 2d43db83ba706fd27379781906fd9ca4 1183 Pfam PF13361 UvrD-like helicase C-terminal domain 441 808 8.7E-19 T 15-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 AM378_14465 2d43db83ba706fd27379781906fd9ca4 1183 Gene3D G3DSA:1.10.3170.10 156 349 8.9E-166 T 15-10-2018 AM378_14465 2d43db83ba706fd27379781906fd9ca4 1183 Gene3D G3DSA:3.40.50.300 9 436 8.9E-166 T 15-10-2018 AM378_14465 2d43db83ba706fd27379781906fd9ca4 1183 SUPERFAMILY SSF52540 17 819 1.5E-108 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_14465 2d43db83ba706fd27379781906fd9ca4 1183 Gene3D G3DSA:3.90.320.10 889 1179 2.5E-117 T 15-10-2018 IPR011604 Exonuclease, phage-type/RecB, C-terminal AM378_14465 2d43db83ba706fd27379781906fd9ca4 1183 Gene3D G3DSA:1.10.486.10 583 728 7.2E-171 T 15-10-2018 AM378_14465 2d43db83ba706fd27379781906fd9ca4 1183 Gene3D G3DSA:3.40.50.300 445 846 7.2E-171 T 15-10-2018 AM378_14465 2d43db83ba706fd27379781906fd9ca4 1183 Hamap MF_01485 RecBCD enzyme subunit RecB [recB]. 7 1173 23.014 T 15-10-2018 IPR004586 RecBCD enzyme subunit RecB GO:0005524|GO:0006281|GO:0008854 AM378_14465 2d43db83ba706fd27379781906fd9ca4 1183 SUPERFAMILY SSF52980 901 1174 2.14E-95 T 15-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 AM378_14465 2d43db83ba706fd27379781906fd9ca4 1183 Pfam PF00580 UvrD/REP helicase N-terminal domain 10 436 1.7E-60 T 15-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 AM378_21300 655ae5c00d3003bf1ca935ebc0d5d024 97 Pfam PF01985 CRS1 / YhbY (CRM) domain 3 86 6.1E-23 T 15-10-2018 IPR001890 RNA-binding, CRM domain GO:0003723 AM378_21300 655ae5c00d3003bf1ca935ebc0d5d024 97 TIGRFAM TIGR00253 RNA_bind_YhbY: putative RNA-binding protein, YhbY family 3 97 2.6E-41 T 15-10-2018 IPR017924 RNA-binding protein YhbY GO:0003723 AM378_21300 655ae5c00d3003bf1ca935ebc0d5d024 97 SUPERFAMILY SSF75471 1 95 5.89E-32 T 15-10-2018 IPR035920 YhbY-like superfamily AM378_21300 655ae5c00d3003bf1ca935ebc0d5d024 97 SMART SM01103 3 86 2.4E-41 T 15-10-2018 IPR001890 RNA-binding, CRM domain GO:0003723 AM378_21300 655ae5c00d3003bf1ca935ebc0d5d024 97 Gene3D G3DSA:3.30.110.60 1 97 6.1E-39 T 15-10-2018 IPR035920 YhbY-like superfamily AM378_21300 655ae5c00d3003bf1ca935ebc0d5d024 97 ProDom PD010559 RNA-BINDING YHBY UPF0044 PREDICTED RNA RIBOSOMAL CONTAINING KH BINDING DOMAIN 9 97 1.0E-43 T 15-10-2018 IPR001890 RNA-binding, CRM domain GO:0003723 AM378_03835 de45346530ebf8aed270a5bda2f33875 86 SUPERFAMILY SSF159871 4 86 4.19E-18 T 15-10-2018 IPR036275 YdgH-like superfamily AM378_03835 de45346530ebf8aed270a5bda2f33875 86 Pfam PF07338 Protein of unknown function (DUF1471) 34 85 1.2E-12 T 15-10-2018 IPR010854 Domain of unknown function DUF1471 AM378_03835 de45346530ebf8aed270a5bda2f33875 86 Gene3D G3DSA:3.30.1660.10 19 86 3.8E-12 T 15-10-2018 IPR025543 Dodecin-like AM378_10595 fb2e43e6b95feacf937f37c6c604fd35 206 Gene3D G3DSA:2.60.130.10 1 206 2.4E-77 T 15-10-2018 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 AM378_10595 fb2e43e6b95feacf937f37c6c604fd35 206 ProSitePatterns PS00083 Intradiol ring-cleavage dioxygenases signature. 51 79 - T 15-10-2018 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 AM378_10595 fb2e43e6b95feacf937f37c6c604fd35 206 Pfam PF00775 Dioxygenase 40 196 8.8E-19 T 15-10-2018 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 AM378_10595 fb2e43e6b95feacf937f37c6c604fd35 206 SUPERFAMILY SSF49482 4 206 3.66E-64 T 15-10-2018 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 AM378_10595 fb2e43e6b95feacf937f37c6c604fd35 206 TIGRFAM TIGR02423 protocat_alph: protocatechuate 3,4-dioxygenase, alpha subunit 8 206 3.6E-79 T 15-10-2018 IPR012786 Protocatechuate 3,4-dioxygenase, alpha subunit GO:0005506|GO:0018578|GO:0019439|GO:0055114 KEGG: 00362+1.13.11.3|KEGG: 00624+1.13.11.3|MetaCyc: PWY-6041 AM378_00005 50469c4ca6b0573c3e71db795ef00359 267 Gene3D G3DSA:1.10.4030.30 40 207 5.7E-17 T 15-10-2018 AM378_00005 50469c4ca6b0573c3e71db795ef00359 267 SUPERFAMILY SSF109998 40 239 2.49E-37 T 15-10-2018 IPR027304 Trigger factor/SurA domain superfamily AM378_00005 50469c4ca6b0573c3e71db795ef00359 267 Pfam PF13624 SurA N-terminal domain 1 165 1.2E-52 T 15-10-2018 AM378_00035 6693ae42c740c0f174d55659488a397f 346 Gene3D G3DSA:3.40.50.1100 49 155 1.7E-67 T 15-10-2018 AM378_00035 6693ae42c740c0f174d55659488a397f 346 Gene3D G3DSA:3.40.50.1100 22 322 1.7E-67 T 15-10-2018 AM378_00035 6693ae42c740c0f174d55659488a397f 346 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 23 314 3.0E-44 T 15-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme AM378_00035 6693ae42c740c0f174d55659488a397f 346 SUPERFAMILY SSF53686 21 333 1.24E-69 T 15-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme AM378_07525 547ef00d0bef5f51a6b44dae089cfaa0 254 ProSitePatterns PS00042 Crp-type HTH domain signature. 195 218 - T 15-10-2018 IPR018335 Transcription regulator HTH, Crp-type, conserved site GO:0003700|GO:0005622|GO:0006355 AM378_07525 547ef00d0bef5f51a6b44dae089cfaa0 254 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 209 224 2.6E-11 T 15-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 AM378_07525 547ef00d0bef5f51a6b44dae089cfaa0 254 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 193 209 2.6E-11 T 15-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 AM378_07525 547ef00d0bef5f51a6b44dae089cfaa0 254 Gene3D G3DSA:1.10.10.10 165 247 1.0E-24 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_07525 547ef00d0bef5f51a6b44dae089cfaa0 254 Pfam PF00027 Cyclic nucleotide-binding domain 51 132 2.8E-15 T 15-10-2018 IPR000595 Cyclic nucleotide-binding domain AM378_07525 547ef00d0bef5f51a6b44dae089cfaa0 254 SMART SM00100 30 151 3.3E-21 T 15-10-2018 IPR000595 Cyclic nucleotide-binding domain AM378_07525 547ef00d0bef5f51a6b44dae089cfaa0 254 SUPERFAMILY SSF51206 23 162 6.42E-31 T 15-10-2018 IPR018490 Cyclic nucleotide-binding-like AM378_07525 547ef00d0bef5f51a6b44dae089cfaa0 254 SMART SM00419 187 235 7.1E-13 T 15-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 AM378_07525 547ef00d0bef5f51a6b44dae089cfaa0 254 Pfam PF13545 Crp-like helix-turn-helix domain 168 240 4.9E-15 T 15-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 AM378_07525 547ef00d0bef5f51a6b44dae089cfaa0 254 Gene3D G3DSA:2.60.120.10 43 164 1.1E-47 T 15-10-2018 IPR014710 RmlC-like jelly roll fold AM378_07525 547ef00d0bef5f51a6b44dae089cfaa0 254 SUPERFAMILY SSF46785 165 243 4.18E-18 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM378_08065 9efe0f0693846e5ea0ce9edede9f5cd4 301 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 73 233 1.5E-62 T 15-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 AM378_08065 9efe0f0693846e5ea0ce9edede9f5cd4 301 Pfam PF01479 S4 domain 4 43 1.8E-12 T 15-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM378_08065 9efe0f0693846e5ea0ce9edede9f5cd4 301 SMART SM00363 3 74 6.9E-11 T 15-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM378_08065 9efe0f0693846e5ea0ce9edede9f5cd4 301 SUPERFAMILY SSF55120 69 232 4.32E-44 T 15-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM378_08065 9efe0f0693846e5ea0ce9edede9f5cd4 301 SUPERFAMILY SSF55174 5 98 8.68E-13 T 15-10-2018 AM378_08065 9efe0f0693846e5ea0ce9edede9f5cd4 301 Gene3D G3DSA:3.10.290.10 1 61 8.1E-23 T 15-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 AM378_08065 9efe0f0693846e5ea0ce9edede9f5cd4 301 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 107 121 - T 15-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 AM378_08065 9efe0f0693846e5ea0ce9edede9f5cd4 301 Gene3D G3DSA:3.30.2350.10 63 251 9.8E-53 T 15-10-2018 AM378_08065 9efe0f0693846e5ea0ce9edede9f5cd4 301 Pfam PF00849 RNA pseudouridylate synthase 69 199 2.0E-17 T 15-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM378_18735 2941f34e4bfc0c7651f2a1396205909b 161 Hamap MF_00471 Regulator of ribonuclease activity A [rraA]. 1 161 46.723 T 15-10-2018 IPR014339 Regulator of ribonuclease activity A, gammaproteobacteria GO:0008428|GO:0051252 AM378_18735 2941f34e4bfc0c7651f2a1396205909b 161 Pfam PF03737 Aldolase/RraA 5 152 3.3E-35 T 15-10-2018 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein AM378_18735 2941f34e4bfc0c7651f2a1396205909b 161 Gene3D G3DSA:3.50.30.40 1 161 4.2E-61 T 15-10-2018 AM378_18735 2941f34e4bfc0c7651f2a1396205909b 161 SUPERFAMILY SSF89562 2 158 1.57E-43 T 15-10-2018 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily AM378_18735 2941f34e4bfc0c7651f2a1396205909b 161 TIGRFAM TIGR02998 RraA_entero: regulator of ribonuclease activity A 1 161 2.7E-87 T 15-10-2018 IPR014339 Regulator of ribonuclease activity A, gammaproteobacteria GO:0008428|GO:0051252 AM378_18735 2941f34e4bfc0c7651f2a1396205909b 161 TIGRFAM TIGR01935 NOT-MenG: RraA family 5 154 1.9E-61 T 15-10-2018 IPR010203 Regulator of ribonuclease activity A GO:0008428|GO:0051252 AM378_14750 be4a0889e8799264fa46a2326581930d 527 TIGRFAM TIGR00795 lctP: transporter, lactate permease (LctP) family 5 524 4.7E-125 T 15-10-2018 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 AM378_14750 be4a0889e8799264fa46a2326581930d 527 Pfam PF02652 L-lactate permease 5 523 9.7E-135 T 15-10-2018 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 AM378_03535 15ce42cee06b2cec1a2ec4dcd3472419 249 TIGRFAM TIGR00466 kdsB: 3-deoxy-D-manno-octulosonate cytidylyltransferase 1 241 1.4E-123 T 15-10-2018 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269 AM378_03535 15ce42cee06b2cec1a2ec4dcd3472419 249 SUPERFAMILY SSF53448 3 244 8.56E-68 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AM378_03535 15ce42cee06b2cec1a2ec4dcd3472419 249 Pfam PF02348 Cytidylyltransferase 4 221 1.5E-68 T 15-10-2018 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|Reactome: R-HSA-4085001 AM378_03535 15ce42cee06b2cec1a2ec4dcd3472419 249 Hamap MF_00057 8-amino-3,8-dideoxy-manno-octulosonate cytidylyltransferase [kdsB]. 1 248 45.96 T 15-10-2018 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269 AM378_03535 15ce42cee06b2cec1a2ec4dcd3472419 249 Gene3D G3DSA:3.90.550.10 1 247 1.3E-98 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AM378_08295 c04f45e20fcdfbf674c7ee82b62fd4a3 194 Gene3D G3DSA:3.30.60.20 144 189 6.1E-10 T 15-10-2018 AM378_08295 c04f45e20fcdfbf674c7ee82b62fd4a3 194 SUPERFAMILY SSF57716 142 191 1.33E-17 T 15-10-2018 AM378_08295 c04f45e20fcdfbf674c7ee82b62fd4a3 194 Hamap MF_00124 Thymidine kinase [tdk]. 1 189 35.395 T 15-10-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 AM378_08295 c04f45e20fcdfbf674c7ee82b62fd4a3 194 SUPERFAMILY SSF52540 1 141 8.15E-39 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_08295 c04f45e20fcdfbf674c7ee82b62fd4a3 194 PIRSF PIRSF035805 1 193 7.0E-58 T 15-10-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 AM378_08295 c04f45e20fcdfbf674c7ee82b62fd4a3 194 Gene3D G3DSA:3.40.50.300 1 141 1.9E-25 T 15-10-2018 AM378_08295 c04f45e20fcdfbf674c7ee82b62fd4a3 194 ProSitePatterns PS00603 Thymidine kinase cellular-type signature. 173 186 - T 15-10-2018 IPR020633 Thymidine kinase, conserved site GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 AM378_08295 c04f45e20fcdfbf674c7ee82b62fd4a3 194 Pfam PF00265 Thymidine kinase 2 186 8.3E-62 T 15-10-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 AM378_19545 b9e606d42c4788f170a8b712a5ba1ef9 188 Pfam PF03352 Methyladenine glycosylase 8 183 1.2E-81 T 15-10-2018 IPR005019 Methyladenine glycosylase GO:0006284|GO:0008725 AM378_19545 b9e606d42c4788f170a8b712a5ba1ef9 188 Gene3D G3DSA:1.10.340.30 4 188 1.5E-88 T 15-10-2018 AM378_19545 b9e606d42c4788f170a8b712a5ba1ef9 188 TIGRFAM TIGR00624 tag: DNA-3-methyladenine glycosylase I 4 184 1.5E-86 T 15-10-2018 IPR004597 DNA-3-methyladenine glycosylase I GO:0006284|GO:0008725 AM378_19545 b9e606d42c4788f170a8b712a5ba1ef9 188 SUPERFAMILY SSF48150 5 185 3.36E-82 T 15-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 AM378_02520 d8944dbfa5fc5bb9ba326618aaf955ab 299 Pfam PF03466 LysR substrate binding domain 89 290 3.9E-45 T 15-10-2018 IPR005119 LysR, substrate-binding AM378_02520 d8944dbfa5fc5bb9ba326618aaf955ab 299 Gene3D G3DSA:3.40.190.290 90 293 1.6E-58 T 15-10-2018 AM378_02520 d8944dbfa5fc5bb9ba326618aaf955ab 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 4.3E-27 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_02520 d8944dbfa5fc5bb9ba326618aaf955ab 299 SUPERFAMILY SSF53850 90 290 2.58E-42 T 15-10-2018 AM378_02520 d8944dbfa5fc5bb9ba326618aaf955ab 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 3.2E-12 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_02520 d8944dbfa5fc5bb9ba326618aaf955ab 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 3.2E-12 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_02520 d8944dbfa5fc5bb9ba326618aaf955ab 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 3.2E-12 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_02520 d8944dbfa5fc5bb9ba326618aaf955ab 299 SUPERFAMILY SSF46785 3 110 2.72E-27 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM378_02520 d8944dbfa5fc5bb9ba326618aaf955ab 299 Gene3D G3DSA:1.10.10.10 1 86 5.0E-32 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_11940 514fafae56ed88b5746820a04b288246 505 Hamap MF_01931 Amidophosphoribosyltransferase [purF]. 1 466 45.067 T 15-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 AM378_11940 514fafae56ed88b5746820a04b288246 505 PIRSF PIRSF000485 1 483 2.7E-172 T 15-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 AM378_11940 514fafae56ed88b5746820a04b288246 505 Pfam PF00156 Phosphoribosyl transferase domain 285 394 3.9E-8 T 15-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 AM378_11940 514fafae56ed88b5746820a04b288246 505 SUPERFAMILY SSF53271 252 485 5.24E-72 T 15-10-2018 IPR029057 Phosphoribosyltransferase-like AM378_11940 514fafae56ed88b5746820a04b288246 505 Pfam PF13522 Glutamine amidotransferase domain 64 210 1.6E-16 T 15-10-2018 AM378_11940 514fafae56ed88b5746820a04b288246 505 Gene3D G3DSA:3.60.20.10 2 414 6.7E-163 T 15-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AM378_11940 514fafae56ed88b5746820a04b288246 505 SUPERFAMILY SSF56235 2 259 1.29E-75 T 15-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AM378_11940 514fafae56ed88b5746820a04b288246 505 TIGRFAM TIGR01134 purF: amidophosphoribosyltransferase 2 466 8.5E-163 T 15-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 AM378_11940 514fafae56ed88b5746820a04b288246 505 Gene3D G3DSA:3.40.50.2020 279 443 6.7E-163 T 15-10-2018 AM378_17340 55eead51e874157a1815af4969d3ebf4 272 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 119 190 8.7E-11 T 15-10-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase AM378_17340 55eead51e874157a1815af4969d3ebf4 272 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 6 88 8.9E-24 T 15-10-2018 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 AM378_17340 55eead51e874157a1815af4969d3ebf4 272 SUPERFAMILY SSF53223 2 101 3.05E-30 T 15-10-2018 AM378_17340 55eead51e874157a1815af4969d3ebf4 272 TIGRFAM TIGR00507 aroE: shikimate dehydrogenase 4 270 1.8E-96 T 15-10-2018 IPR011342 Shikimate dehydrogenase GO:0004764|GO:0019632|GO:0050661|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 AM378_17340 55eead51e874157a1815af4969d3ebf4 272 Hamap MF_00222 Shikimate dehydrogenase (NADP(+)) [aroE]. 1 269 32.526 T 15-10-2018 IPR022893 Shikimate dehydrogenase family GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 AM378_17340 55eead51e874157a1815af4969d3ebf4 272 Gene3D G3DSA:3.40.50.720 102 244 9.0E-83 T 15-10-2018 AM378_17340 55eead51e874157a1815af4969d3ebf4 272 Gene3D G3DSA:3.40.50.10860 5 254 9.0E-83 T 15-10-2018 AM378_17340 55eead51e874157a1815af4969d3ebf4 272 SUPERFAMILY SSF51735 102 267 1.88E-43 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily AM378_02690 51c8e72c5d889b8558120b8ed91c0266 193 Gene3D G3DSA:2.70.40.10 1 193 1.8E-52 T 15-10-2018 IPR036157 dUTPase-like superfamily AM378_02690 51c8e72c5d889b8558120b8ed91c0266 193 Pfam PF00692 dUTPase 79 185 1.5E-8 T 15-10-2018 IPR029054 dUTPase-like AM378_02690 51c8e72c5d889b8558120b8ed91c0266 193 SUPERFAMILY SSF51283 1 193 1.3E-60 T 15-10-2018 IPR036157 dUTPase-like superfamily AM378_02690 51c8e72c5d889b8558120b8ed91c0266 193 Hamap MF_00146 dCTP deaminase [dcd]. 1 190 34.449 T 15-10-2018 IPR011962 dCTP deaminase GO:0006229|GO:0008829 AM378_02690 51c8e72c5d889b8558120b8ed91c0266 193 TIGRFAM TIGR02274 dCTP_deam: deoxycytidine triphosphate deaminase 2 190 3.2E-69 T 15-10-2018 IPR011962 dCTP deaminase GO:0006229|GO:0008829 AM378_06180 398cbc713622d8fb445a8582f0107260 130 Pfam PF13411 MerR HTH family regulatory protein 7 72 1.2E-10 T 15-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM378_06180 398cbc713622d8fb445a8582f0107260 130 ProSitePatterns PS00552 MerR-type HTH domain signature. 8 30 - T 15-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM378_06180 398cbc713622d8fb445a8582f0107260 130 SMART SM00422 5 73 7.0E-12 T 15-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM378_06180 398cbc713622d8fb445a8582f0107260 130 Gene3D G3DSA:1.10.1660.10 1 122 2.5E-24 T 15-10-2018 AM378_06180 398cbc713622d8fb445a8582f0107260 130 SUPERFAMILY SSF46955 6 123 7.69E-23 T 15-10-2018 IPR009061 Putative DNA-binding domain superfamily AM378_06180 398cbc713622d8fb445a8582f0107260 130 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 6 17 2.6E-6 T 15-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM378_06180 398cbc713622d8fb445a8582f0107260 130 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 40 60 2.6E-6 T 15-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM378_06180 398cbc713622d8fb445a8582f0107260 130 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 17 30 2.6E-6 T 15-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM378_19950 b1172a71c92314d84f3bccdac66d3e10 674 SUPERFAMILY SSF55073 255 411 6.91E-24 T 15-10-2018 IPR029787 Nucleotide cyclase AM378_19950 b1172a71c92314d84f3bccdac66d3e10 674 Gene3D G3DSA:3.20.20.450 424 671 1.8E-83 T 15-10-2018 IPR035919 EAL domain superfamily AM378_19950 b1172a71c92314d84f3bccdac66d3e10 674 SMART SM00267 238 409 1.2E-17 T 15-10-2018 IPR000160 GGDEF domain AM378_19950 b1172a71c92314d84f3bccdac66d3e10 674 SUPERFAMILY SSF141868 424 669 2.88E-76 T 15-10-2018 IPR035919 EAL domain superfamily AM378_19950 b1172a71c92314d84f3bccdac66d3e10 674 Pfam PF00563 EAL domain 426 659 9.5E-62 T 15-10-2018 IPR001633 EAL domain AM378_19950 b1172a71c92314d84f3bccdac66d3e10 674 Pfam PF17154 Gammaproteobacterial periplasmic sensor domain 42 161 1.4E-58 T 15-10-2018 IPR033419 Gammaproteobacterial periplasmic sensor domain GAPES3 AM378_19950 b1172a71c92314d84f3bccdac66d3e10 674 Gene3D G3DSA:3.30.70.270 244 423 2.9E-28 T 15-10-2018 AM378_19950 b1172a71c92314d84f3bccdac66d3e10 674 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 247 407 5.4E-11 T 15-10-2018 IPR000160 GGDEF domain AM378_19950 b1172a71c92314d84f3bccdac66d3e10 674 Pfam PF00990 Diguanylate cyclase, GGDEF domain 253 405 7.2E-20 T 15-10-2018 IPR000160 GGDEF domain AM378_19950 b1172a71c92314d84f3bccdac66d3e10 674 SMART SM00052 419 664 1.9E-94 T 15-10-2018 IPR001633 EAL domain AM378_12300 11fced8e12b145363787c0b921eb07b1 444 SUPERFAMILY SSF53448 59 339 7.67E-62 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AM378_12300 11fced8e12b145363787c0b921eb07b1 444 TIGRFAM TIGR03937 PgaC_IcaA: poly-beta-1,6 N-acetyl-D-glucosamine synthase 30 438 1.2E-191 T 15-10-2018 IPR023853 Poly-beta-1,6 N-acetyl-D-glucosamine synthase PgaC/IcaA GO:0008375|GO:0043708 AM378_12300 11fced8e12b145363787c0b921eb07b1 444 Pfam PF00535 Glycosyl transferase family 2 78 245 1.7E-32 T 15-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 AM378_12300 11fced8e12b145363787c0b921eb07b1 444 Gene3D G3DSA:3.90.550.10 72 287 1.4E-43 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AM378_22910 1b99aa584b34d96d7ffba7c4ffa25f51 347 Hamap MF_00596 GMP reductase [guaC]. 1 345 50.865 T 15-10-2018 IPR005993 GMP reductase GO:0003920|GO:0009117|GO:1902560 KEGG: 00230+1.7.1.7|Reactome: R-HSA-74217 AM378_22910 1b99aa584b34d96d7ffba7c4ffa25f51 347 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 176 188 - T 15-10-2018 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 AM378_22910 1b99aa584b34d96d7ffba7c4ffa25f51 347 SUPERFAMILY SSF51412 6 335 5.89E-99 T 15-10-2018 AM378_22910 1b99aa584b34d96d7ffba7c4ffa25f51 347 TIGRFAM TIGR01305 GMP_reduct_1: guanosine monophosphate reductase 2 344 3.6E-200 T 15-10-2018 IPR005993 GMP reductase GO:0003920|GO:0009117|GO:1902560 KEGG: 00230+1.7.1.7|Reactome: R-HSA-74217 AM378_22910 1b99aa584b34d96d7ffba7c4ffa25f51 347 PIRSF PIRSF000235 1 347 2.2E-200 T 15-10-2018 IPR005993 GMP reductase GO:0003920|GO:0009117|GO:1902560 KEGG: 00230+1.7.1.7|Reactome: R-HSA-74217 AM378_22910 1b99aa584b34d96d7ffba7c4ffa25f51 347 SMART SM01240 7 344 4.2E-138 T 15-10-2018 AM378_22910 1b99aa584b34d96d7ffba7c4ffa25f51 347 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 9 338 3.1E-78 T 15-10-2018 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 AM378_22910 1b99aa584b34d96d7ffba7c4ffa25f51 347 Gene3D G3DSA:3.20.20.70 1 345 5.9E-116 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM378_05680 bcbf4e4cf26431532fa463c7e8de284e 1018 Gene3D G3DSA:3.30.465.40 18 206 1.4E-45 T 15-10-2018 AM378_05680 bcbf4e4cf26431532fa463c7e8de284e 1018 Pfam PF02913 FAD linked oxidases, C-terminal domain 281 539 1.2E-64 T 15-10-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 AM378_05680 bcbf4e4cf26431532fa463c7e8de284e 1018 SUPERFAMILY SSF46548 516 690 3.66E-8 T 15-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 AM378_05680 bcbf4e4cf26431532fa463c7e8de284e 1018 SUPERFAMILY SSF56176 18 282 1.59E-53 T 15-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 AM378_05680 bcbf4e4cf26431532fa463c7e8de284e 1018 Pfam PF13183 4Fe-4S dicluster domain 576 687 2.4E-12 T 15-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AM378_05680 bcbf4e4cf26431532fa463c7e8de284e 1018 Pfam PF01565 FAD binding domain 52 192 8.0E-37 T 15-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 AM378_05680 bcbf4e4cf26431532fa463c7e8de284e 1018 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 673 684 - T 15-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AM378_05680 bcbf4e4cf26431532fa463c7e8de284e 1018 SUPERFAMILY SSF55103 259 541 1.32E-53 T 15-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 AM378_19550 c0191a8efe431ff9f2ffbc52b5ed1f2c 662 SUPERFAMILY SSF103515 360 662 1.83E-42 T 15-10-2018 IPR036709 Autotransporter beta-domain superfamily AM378_19550 c0191a8efe431ff9f2ffbc52b5ed1f2c 662 Gene3D G3DSA:3.40.50.1110 22 228 7.9E-26 T 15-10-2018 IPR036514 SGNH hydrolase superfamily AM378_19550 c0191a8efe431ff9f2ffbc52b5ed1f2c 662 Gene3D G3DSA:3.40.50.1110 229 357 7.4E-25 T 15-10-2018 IPR036514 SGNH hydrolase superfamily AM378_19550 c0191a8efe431ff9f2ffbc52b5ed1f2c 662 Pfam PF00657 GDSL-like Lipase/Acylhydrolase 33 345 3.7E-9 T 15-10-2018 IPR001087 GDSL lipase/esterase GO:0016788 AM378_19550 c0191a8efe431ff9f2ffbc52b5ed1f2c 662 Gene3D G3DSA:2.40.128.130 359 662 2.9E-57 T 15-10-2018 IPR036709 Autotransporter beta-domain superfamily AM378_19550 c0191a8efe431ff9f2ffbc52b5ed1f2c 662 Pfam PF03797 Autotransporter beta-domain 392 640 2.2E-46 T 15-10-2018 IPR005546 Autotransporter beta-domain AM378_19550 c0191a8efe431ff9f2ffbc52b5ed1f2c 662 ProSitePatterns PS01098 Lipolytic enzymes "G-D-S-L" family, serine active site. 32 43 - T 15-10-2018 IPR008265 Lipase, GDSL, active site GO:0006629|GO:0016298 Reactome: R-HSA-1482788|Reactome: R-HSA-975634 AM378_19550 c0191a8efe431ff9f2ffbc52b5ed1f2c 662 SMART SM00869 389 651 8.8E-33 T 15-10-2018 IPR005546 Autotransporter beta-domain AM378_19550 c0191a8efe431ff9f2ffbc52b5ed1f2c 662 PIRSF PIRSF037375 2 662 4.4E-228 T 15-10-2018 IPR017186 Lipase, autotransporter EstA AM378_19550 c0191a8efe431ff9f2ffbc52b5ed1f2c 662 SUPERFAMILY SSF52266 31 349 2.93E-8 T 15-10-2018 AM378_02135 94dd1230963e4d13e4db21d003cb072d 529 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 314 329 - T 15-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AM378_02135 94dd1230963e4d13e4db21d003cb072d 529 Gene3D G3DSA:1.10.8.60 399 468 2.9E-15 T 15-10-2018 AM378_02135 94dd1230963e4d13e4db21d003cb072d 529 SUPERFAMILY SSF159800 10 192 8.89E-49 T 15-10-2018 AM378_02135 94dd1230963e4d13e4db21d003cb072d 529 Gene3D G3DSA:3.40.50.10660 87 174 3.4E-64 T 15-10-2018 AM378_02135 94dd1230963e4d13e4db21d003cb072d 529 Gene3D G3DSA:3.40.50.2300 18 190 3.4E-64 T 15-10-2018 AM378_02135 94dd1230963e4d13e4db21d003cb072d 529 Gene3D G3DSA:3.40.50.300 208 398 1.2E-59 T 15-10-2018 AM378_02135 94dd1230963e4d13e4db21d003cb072d 529 SMART SM00382 239 400 5.5E-11 T 15-10-2018 IPR003593 AAA+ ATPase domain AM378_02135 94dd1230963e4d13e4db21d003cb072d 529 SUPERFAMILY SSF52540 219 464 2.0E-59 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_02135 94dd1230963e4d13e4db21d003cb072d 529 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 511 529 9.4E-7 T 15-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AM378_02135 94dd1230963e4d13e4db21d003cb072d 529 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 494 511 9.4E-7 T 15-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AM378_02135 94dd1230963e4d13e4db21d003cb072d 529 SUPERFAMILY SSF46689 445 527 1.52E-9 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AM378_02135 94dd1230963e4d13e4db21d003cb072d 529 TIGRFAM TIGR02329 propionate_PrpR: propionate catabolism operon regulatory protein PrpR 8 527 5.3E-226 T 15-10-2018 IPR012704 Signal transduction response regulator, propionate catabolism, transcriptional regulator PrpR GO:0000156|GO:0000160|GO:0003677|GO:0005737|GO:0019629 AM378_02135 94dd1230963e4d13e4db21d003cb072d 529 Pfam PF06506 Propionate catabolism activator 35 195 5.3E-46 T 15-10-2018 IPR010524 Signal transduction response regulator, propionate catabolism activator, N-terminal GO:0000156|GO:0000160|GO:0003677|GO:0005524 AM378_02135 94dd1230963e4d13e4db21d003cb072d 529 Gene3D G3DSA:1.10.10.60 497 529 5.5E-10 T 15-10-2018 AM378_02135 94dd1230963e4d13e4db21d003cb072d 529 Pfam PF00158 Sigma-54 interaction domain 220 394 4.2E-61 T 15-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 AM378_02135 94dd1230963e4d13e4db21d003cb072d 529 Pfam PF02954 Bacterial regulatory protein, Fis family 498 527 1.4E-10 T 15-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AM378_02135 94dd1230963e4d13e4db21d003cb072d 529 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 445 454 - T 15-10-2018 IPR025944 Sigma-54 interaction domain, conserved site AM378_18750 8f8ca573a0431f3c59343b99b85ca852 502 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 263 452 1.5E-61 T 15-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 AM378_18750 8f8ca573a0431f3c59343b99b85ca852 502 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 7 254 9.0E-93 T 15-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 AM378_18750 8f8ca573a0431f3c59343b99b85ca852 502 SUPERFAMILY SSF53067 6 257 1.66E-96 T 15-10-2018 AM378_18750 8f8ca573a0431f3c59343b99b85ca852 502 Gene3D G3DSA:3.30.420.40 256 502 1.1E-95 T 15-10-2018 AM378_18750 8f8ca573a0431f3c59343b99b85ca852 502 PIRSF PIRSF000538 5 502 3.4E-180 T 15-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 AM378_18750 8f8ca573a0431f3c59343b99b85ca852 502 Gene3D G3DSA:3.30.420.40 3 255 6.4E-117 T 15-10-2018 AM378_18750 8f8ca573a0431f3c59343b99b85ca852 502 Hamap MF_00186 Glycerol kinase [glpK]. 5 499 59.934 T 15-10-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 AM378_18750 8f8ca573a0431f3c59343b99b85ca852 502 SUPERFAMILY SSF53067 257 498 3.56E-86 T 15-10-2018 AM378_18750 8f8ca573a0431f3c59343b99b85ca852 502 TIGRFAM TIGR01311 glycerol_kin: glycerol kinase 6 498 4.6E-229 T 15-10-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 AM378_18750 8f8ca573a0431f3c59343b99b85ca852 502 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 137 149 - T 15-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 AM378_18750 8f8ca573a0431f3c59343b99b85ca852 502 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 364 384 - T 15-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 AM378_18025 bc9c2702539a5493981541c085d653ca 278 Gene3D G3DSA:1.20.1540.10 92 271 7.5E-60 T 15-10-2018 IPR035952 Rhomboid-like superfamily AM378_18025 bc9c2702539a5493981541c085d653ca 278 Gene3D G3DSA:3.30.70.2350 1 68 1.5E-22 T 15-10-2018 IPR038236 GlpG peptidase, N-terminal domain superfamily AM378_18025 bc9c2702539a5493981541c085d653ca 278 SUPERFAMILY SSF144091 93 271 1.03E-42 T 15-10-2018 AM378_18025 bc9c2702539a5493981541c085d653ca 278 TIGRFAM TIGR04239 rhombo_GlpG: rhomboid family protease GlpG 4 272 8.6E-120 T 15-10-2018 IPR023662 Rhomboid protease GlpG GO:0004252|GO:0006508|GO:0016021 AM378_18025 bc9c2702539a5493981541c085d653ca 278 Pfam PF01694 Rhomboid family 132 271 8.2E-28 T 15-10-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 AM378_18025 bc9c2702539a5493981541c085d653ca 278 Hamap MF_01594 Rhomboid protease GlpG [glpG]. 1 275 47.969 T 15-10-2018 IPR023662 Rhomboid protease GlpG GO:0004252|GO:0006508|GO:0016021 AM378_18025 bc9c2702539a5493981541c085d653ca 278 Pfam PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease 1 84 1.3E-29 T 15-10-2018 IPR022732 Peptidase S54, GlpG peptidase, N-terminal GO:0004252|GO:0016021 AM378_20005 a2a99590e41146a65a6f0a8d004e177a 376 Hamap MF_02028 UDP-N-acetylglucosamine 2-epimerase [wecB]. 16 374 68.297 T 15-10-2018 IPR032892 UDP-N-acetylglucosamine 2-epimerase WecB GO:0008761|GO:0009246 KEGG: 00520+5.1.3.14|MetaCyc: PWY-7335|MetaCyc: PWY-7815|MetaCyc: PWY-7816|MetaCyc: PWY-7819 AM378_20005 a2a99590e41146a65a6f0a8d004e177a 376 TIGRFAM TIGR00236 wecB: UDP-N-acetylglucosamine 2-epimerase 1 372 1.5E-171 T 15-10-2018 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like GO:0008761 AM378_20005 a2a99590e41146a65a6f0a8d004e177a 376 Gene3D G3DSA:3.40.50.2000 2 367 1.2E-155 T 15-10-2018 AM378_20005 a2a99590e41146a65a6f0a8d004e177a 376 Gene3D G3DSA:3.40.50.2000 187 356 1.2E-155 T 15-10-2018 AM378_20005 a2a99590e41146a65a6f0a8d004e177a 376 SUPERFAMILY SSF53756 2 372 8.37E-142 T 15-10-2018 AM378_20005 a2a99590e41146a65a6f0a8d004e177a 376 Pfam PF02350 UDP-N-acetylglucosamine 2-epimerase 22 370 2.3E-127 T 15-10-2018 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 AM378_03485 0dde29ab38c3ac8568bed45cf34e20b5 557 PRINTS PR00681 Ribosomal protein S1 signature 155 175 2.5E-99 T 15-10-2018 AM378_03485 0dde29ab38c3ac8568bed45cf34e20b5 557 PRINTS PR00681 Ribosomal protein S1 signature 21 39 2.5E-99 T 15-10-2018 AM378_03485 0dde29ab38c3ac8568bed45cf34e20b5 557 PRINTS PR00681 Ribosomal protein S1 signature 330 348 2.5E-99 T 15-10-2018 AM378_03485 0dde29ab38c3ac8568bed45cf34e20b5 557 PRINTS PR00681 Ribosomal protein S1 signature 126 143 2.5E-99 T 15-10-2018 AM378_03485 0dde29ab38c3ac8568bed45cf34e20b5 557 PRINTS PR00681 Ribosomal protein S1 signature 212 233 2.5E-99 T 15-10-2018 AM378_03485 0dde29ab38c3ac8568bed45cf34e20b5 557 PRINTS PR00681 Ribosomal protein S1 signature 290 309 2.5E-99 T 15-10-2018 AM378_03485 0dde29ab38c3ac8568bed45cf34e20b5 557 PRINTS PR00681 Ribosomal protein S1 signature 39 53 2.5E-99 T 15-10-2018 AM378_03485 0dde29ab38c3ac8568bed45cf34e20b5 557 PRINTS PR00681 Ribosomal protein S1 signature 108 124 2.5E-99 T 15-10-2018 AM378_03485 0dde29ab38c3ac8568bed45cf34e20b5 557 PRINTS PR00681 Ribosomal protein S1 signature 84 103 2.5E-99 T 15-10-2018 AM378_03485 0dde29ab38c3ac8568bed45cf34e20b5 557 Gene3D G3DSA:2.40.50.140 444 528 9.3E-21 T 15-10-2018 AM378_03485 0dde29ab38c3ac8568bed45cf34e20b5 557 SUPERFAMILY SSF50249 103 185 1.72E-14 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold AM378_03485 0dde29ab38c3ac8568bed45cf34e20b5 557 SUPERFAMILY SSF50249 255 371 1.65E-31 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold AM378_03485 0dde29ab38c3ac8568bed45cf34e20b5 557 Gene3D G3DSA:2.40.50.140 187 268 1.1E-27 T 15-10-2018 AM378_03485 0dde29ab38c3ac8568bed45cf34e20b5 557 TIGRFAM TIGR00717 rpsA: ribosomal protein bS1 3 520 2.7E-240 T 15-10-2018 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 AM378_03485 0dde29ab38c3ac8568bed45cf34e20b5 557 SUPERFAMILY SSF50249 429 536 3.88E-23 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold AM378_03485 0dde29ab38c3ac8568bed45cf34e20b5 557 SUPERFAMILY SSF50249 362 444 1.25E-20 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold AM378_03485 0dde29ab38c3ac8568bed45cf34e20b5 557 SUPERFAMILY SSF50249 1 112 3.51E-19 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold AM378_03485 0dde29ab38c3ac8568bed45cf34e20b5 557 Pfam PF00575 S1 RNA binding domain 275 347 2.7E-20 T 15-10-2018 IPR003029 S1 domain GO:0003676 AM378_03485 0dde29ab38c3ac8568bed45cf34e20b5 557 Pfam PF00575 S1 RNA binding domain 103 171 4.0E-10 T 15-10-2018 IPR003029 S1 domain GO:0003676 AM378_03485 0dde29ab38c3ac8568bed45cf34e20b5 557 Pfam PF00575 S1 RNA binding domain 361 434 9.5E-22 T 15-10-2018 IPR003029 S1 domain GO:0003676 AM378_03485 0dde29ab38c3ac8568bed45cf34e20b5 557 Pfam PF00575 S1 RNA binding domain 190 260 2.4E-21 T 15-10-2018 IPR003029 S1 domain GO:0003676 AM378_03485 0dde29ab38c3ac8568bed45cf34e20b5 557 Pfam PF00575 S1 RNA binding domain 20 78 1.6E-6 T 15-10-2018 IPR003029 S1 domain GO:0003676 AM378_03485 0dde29ab38c3ac8568bed45cf34e20b5 557 Pfam PF00575 S1 RNA binding domain 449 520 7.4E-17 T 15-10-2018 IPR003029 S1 domain GO:0003676 AM378_03485 0dde29ab38c3ac8568bed45cf34e20b5 557 SMART SM00316 449 520 7.2E-22 T 15-10-2018 IPR022967 RNA-binding domain, S1 AM378_03485 0dde29ab38c3ac8568bed45cf34e20b5 557 SMART SM00316 19 87 1.3E-4 T 15-10-2018 IPR022967 RNA-binding domain, S1 AM378_03485 0dde29ab38c3ac8568bed45cf34e20b5 557 SMART SM00316 275 347 2.2E-27 T 15-10-2018 IPR022967 RNA-binding domain, S1 AM378_03485 0dde29ab38c3ac8568bed45cf34e20b5 557 SMART SM00316 362 434 3.4E-21 T 15-10-2018 IPR022967 RNA-binding domain, S1 AM378_03485 0dde29ab38c3ac8568bed45cf34e20b5 557 SMART SM00316 103 171 5.9E-9 T 15-10-2018 IPR022967 RNA-binding domain, S1 AM378_03485 0dde29ab38c3ac8568bed45cf34e20b5 557 SMART SM00316 190 260 2.8E-28 T 15-10-2018 IPR022967 RNA-binding domain, S1 AM378_03485 0dde29ab38c3ac8568bed45cf34e20b5 557 SUPERFAMILY SSF50249 189 277 3.88E-27 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold AM378_03485 0dde29ab38c3ac8568bed45cf34e20b5 557 Gene3D G3DSA:2.40.50.140 6 97 1.8E-17 T 15-10-2018 AM378_03485 0dde29ab38c3ac8568bed45cf34e20b5 557 Gene3D G3DSA:2.40.50.140 269 357 1.1E-31 T 15-10-2018 AM378_03485 0dde29ab38c3ac8568bed45cf34e20b5 557 Gene3D G3DSA:2.40.50.140 98 181 1.3E-7 T 15-10-2018 AM378_03485 0dde29ab38c3ac8568bed45cf34e20b5 557 Gene3D G3DSA:2.40.50.140 358 443 5.9E-24 T 15-10-2018 AM378_03485 0dde29ab38c3ac8568bed45cf34e20b5 557 PIRSF PIRSF002111 1 534 5.4E-221 T 15-10-2018 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 AM378_19300 7994efc9a5831ff283ae016e0d282485 287 Gene3D G3DSA:3.40.1380.10 61 206 3.7E-112 T 15-10-2018 AM378_19300 7994efc9a5831ff283ae016e0d282485 287 PRINTS PR00126 ATP synthase gamma subunit signature 166 183 1.8E-38 T 15-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM378_19300 7994efc9a5831ff283ae016e0d282485 287 PRINTS PR00126 ATP synthase gamma subunit signature 234 253 1.8E-38 T 15-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM378_19300 7994efc9a5831ff283ae016e0d282485 287 PRINTS PR00126 ATP synthase gamma subunit signature 265 286 1.8E-38 T 15-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM378_19300 7994efc9a5831ff283ae016e0d282485 287 PRINTS PR00126 ATP synthase gamma subunit signature 73 92 1.8E-38 T 15-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM378_19300 7994efc9a5831ff283ae016e0d282485 287 Gene3D G3DSA:1.10.287.80 6 283 3.7E-112 T 15-10-2018 AM378_19300 7994efc9a5831ff283ae016e0d282485 287 SUPERFAMILY SSF52943 2 287 6.54E-97 T 15-10-2018 IPR035968 ATP synthase, F1 complex, gamma subunit superfamily GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM378_19300 7994efc9a5831ff283ae016e0d282485 287 TIGRFAM TIGR01146 ATPsyn_F1gamma: ATP synthase F1, gamma subunit 1 287 8.3E-112 T 15-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM378_19300 7994efc9a5831ff283ae016e0d282485 287 Hamap MF_00815 ATP synthase gamma chain [atpG]. 1 287 36.369 T 15-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM378_19300 7994efc9a5831ff283ae016e0d282485 287 Pfam PF00231 ATP synthase 5 286 1.4E-96 T 15-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM378_19300 7994efc9a5831ff283ae016e0d282485 287 ProSitePatterns PS00153 ATP synthase gamma subunit signature. 273 286 - T 15-10-2018 IPR023632 ATP synthase, F1 complex, gamma subunit conserved site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM378_04905 f9601a65ceff6f6589d3aef301821c30 233 SUPERFAMILY SSF53697 95 232 1.23E-18 T 15-10-2018 AM378_04905 f9601a65ceff6f6589d3aef301821c30 233 SUPERFAMILY SSF46689 10 72 3.05E-13 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AM378_04905 f9601a65ceff6f6589d3aef301821c30 233 Gene3D G3DSA:3.40.50.10490 91 232 4.6E-18 T 15-10-2018 AM378_04905 f9601a65ceff6f6589d3aef301821c30 233 Pfam PF01418 Helix-turn-helix domain, rpiR family 9 67 2.5E-12 T 15-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 AM378_04905 f9601a65ceff6f6589d3aef301821c30 233 Pfam PF01380 SIS domain 95 194 1.1E-7 T 15-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 AM378_04905 f9601a65ceff6f6589d3aef301821c30 233 Gene3D G3DSA:1.10.10.10 5 73 1.3E-11 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_09620 b5cf9ab3e1f822d2ac29e74a2b1b4203 453 TIGRFAM TIGR03496 FliI_clade1: flagellar protein export ATPase FliI 29 451 3.6E-197 T 15-10-2018 IPR020005 Flagellar export ATPase FliI, clade 1 GO:0016887|GO:0044780|GO:0071973 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 AM378_09620 b5cf9ab3e1f822d2ac29e74a2b1b4203 453 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 363 372 - T 15-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 AM378_09620 b5cf9ab3e1f822d2ac29e74a2b1b4203 453 TIGRFAM TIGR01026 fliI_yscN: ATPase, FliI/YscN family 7 452 1.0E-190 T 15-10-2018 IPR005714 ATPase, type III secretion system, FliI/YscN GO:0005737|GO:0009058|GO:0016887|GO:0030254|GO:0030257 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 AM378_09620 b5cf9ab3e1f822d2ac29e74a2b1b4203 453 SUPERFAMILY SSF52540 108 378 1.69E-91 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_09620 b5cf9ab3e1f822d2ac29e74a2b1b4203 453 Gene3D G3DSA:3.40.50.12240 19 453 1.6E-168 T 15-10-2018 AM378_09620 b5cf9ab3e1f822d2ac29e74a2b1b4203 453 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 161 372 2.0E-70 T 15-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 AM378_09620 b5cf9ab3e1f822d2ac29e74a2b1b4203 453 SMART SM00382 173 356 6.7E-8 T 15-10-2018 IPR003593 AAA+ ATPase domain AM378_16030 fdbe01d00d71a92d7e9a61fd91146ccd 945 Gene3D G3DSA:1.20.120.330 286 441 1.5E-57 T 15-10-2018 AM378_16030 fdbe01d00d71a92d7e9a61fd91146ccd 945 SUPERFAMILY SSF81301 19 287 7.85E-91 T 15-10-2018 AM378_16030 fdbe01d00d71a92d7e9a61fd91146ccd 945 Gene3D G3DSA:1.10.4050.10 1 111 9.1E-31 T 15-10-2018 AM378_16030 fdbe01d00d71a92d7e9a61fd91146ccd 945 Gene3D G3DSA:1.20.120.330 813 945 6.7E-47 T 15-10-2018 AM378_16030 fdbe01d00d71a92d7e9a61fd91146ccd 945 Gene3D G3DSA:3.30.460.100 563 812 3.0E-99 T 15-10-2018 AM378_16030 fdbe01d00d71a92d7e9a61fd91146ccd 945 Gene3D G3DSA:3.30.460.10 112 285 2.3E-68 T 15-10-2018 AM378_16030 fdbe01d00d71a92d7e9a61fd91146ccd 945 Pfam PF08335 GlnD PII-uridylyltransferase 298 437 2.5E-47 T 15-10-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 AM378_16030 fdbe01d00d71a92d7e9a61fd91146ccd 945 Pfam PF08335 GlnD PII-uridylyltransferase 826 918 3.0E-10 T 15-10-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 AM378_16030 fdbe01d00d71a92d7e9a61fd91146ccd 945 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 554 806 2.2E-99 T 15-10-2018 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 AM378_16030 fdbe01d00d71a92d7e9a61fd91146ccd 945 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 36 277 4.2E-96 T 15-10-2018 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 AM378_16030 fdbe01d00d71a92d7e9a61fd91146ccd 945 SUPERFAMILY SSF81593 816 944 5.81E-34 T 15-10-2018 AM378_16030 fdbe01d00d71a92d7e9a61fd91146ccd 945 SUPERFAMILY SSF81301 526 814 1.7E-88 T 15-10-2018 AM378_16030 fdbe01d00d71a92d7e9a61fd91146ccd 945 Gene3D G3DSA:1.20.120.1510 450 562 5.2E-34 T 15-10-2018 AM378_16030 fdbe01d00d71a92d7e9a61fd91146ccd 945 Hamap MF_00802 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme [glnE]. 28 945 19.694 T 15-10-2018 IPR023057 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme GO:0008882 AM378_16030 fdbe01d00d71a92d7e9a61fd91146ccd 945 SUPERFAMILY SSF81593 288 437 3.22E-45 T 15-10-2018 AM378_24355 50bb3e52744a3846864502d1d4114e25 434 Hamap MF_00303 Trigger factor [tig]. 1 418 22.473 T 15-10-2018 IPR005215 Trigger factor GO:0015031 AM378_24355 50bb3e52744a3846864502d1d4114e25 434 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 156 229 1.1E-14 T 15-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain AM378_24355 50bb3e52744a3846864502d1d4114e25 434 Pfam PF05698 Bacterial trigger factor protein (TF) C-terminus 262 412 1.8E-40 T 15-10-2018 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 AM378_24355 50bb3e52744a3846864502d1d4114e25 434 Pfam PF05697 Bacterial trigger factor protein (TF) 1 143 6.2E-45 T 15-10-2018 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 AM378_24355 50bb3e52744a3846864502d1d4114e25 434 Gene3D G3DSA:3.30.70.1050 1 115 1.6E-43 T 15-10-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 AM378_24355 50bb3e52744a3846864502d1d4114e25 434 PIRSF PIRSF003095 1 434 1.5E-133 T 15-10-2018 IPR005215 Trigger factor GO:0015031 AM378_24355 50bb3e52744a3846864502d1d4114e25 434 SUPERFAMILY SSF102735 1 131 6.54E-42 T 15-10-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 AM378_24355 50bb3e52744a3846864502d1d4114e25 434 Gene3D G3DSA:1.10.3120.10 116 417 8.7E-114 T 15-10-2018 IPR037041 Trigger factor, C-terminal domain superfamily GO:0006457|GO:0015031 AM378_24355 50bb3e52744a3846864502d1d4114e25 434 SUPERFAMILY SSF54534 96 241 3.93E-39 T 15-10-2018 AM378_24355 50bb3e52744a3846864502d1d4114e25 434 TIGRFAM TIGR00115 tig: trigger factor 13 412 6.7E-146 T 15-10-2018 IPR005215 Trigger factor GO:0015031 AM378_24355 50bb3e52744a3846864502d1d4114e25 434 SUPERFAMILY SSF109998 248 429 4.45E-47 T 15-10-2018 IPR027304 Trigger factor/SurA domain superfamily AM378_24355 50bb3e52744a3846864502d1d4114e25 434 Gene3D G3DSA:3.10.50.40 150 246 8.7E-114 T 15-10-2018 AM378_05900 b94c9ae3552013feeec21024be748198 100 Gene3D G3DSA:2.40.128.200 22 100 2.3E-21 T 15-10-2018 IPR036328 C-type lysozyme inhibitor superfamily AM378_05900 b94c9ae3552013feeec21024be748198 100 SUPERFAMILY SSF141488 24 98 2.62E-19 T 15-10-2018 IPR036328 C-type lysozyme inhibitor superfamily AM378_05900 b94c9ae3552013feeec21024be748198 100 Pfam PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme 29 91 5.7E-13 T 15-10-2018 IPR018660 C-type lysozyme inhibitor AM378_04510 58241752d371d8138d7ca1105cf39dd0 313 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 106 278 3.6E-46 T 15-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 AM378_04510 58241752d371d8138d7ca1105cf39dd0 313 SUPERFAMILY SSF51735 97 278 7.3E-48 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily AM378_04510 58241752d371d8138d7ca1105cf39dd0 313 Gene3D G3DSA:3.40.50.720 15 308 3.5E-116 T 15-10-2018 AM378_04510 58241752d371d8138d7ca1105cf39dd0 313 Gene3D G3DSA:3.40.50.720 95 279 3.5E-116 T 15-10-2018 AM378_04510 58241752d371d8138d7ca1105cf39dd0 313 Hamap MF_01666 Glyoxylate/hydroxypyruvate reductase A [ghrA]. 1 313 65.578 T 15-10-2018 IPR023514 Glyoxylate/hydroxypyruvate reductase A GO:0016618|GO:0030267|GO:0055114 KEGG: 00260+1.1.1.81|KEGG: 00620+1.1.1.79|KEGG: 00630+1.1.1.79+1.1.1.81|MetaCyc: PWY-1622 AM378_01695 9983624acb9f7731e14370dd73b68107 747 SUPERFAMILY SSF54665 214 304 2.86E-9 T 15-10-2018 IPR036856 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead superfamily AM378_01695 9983624acb9f7731e14370dd73b68107 747 PIRSF PIRSF036389 1 746 2.4E-189 T 15-10-2018 IPR012368 Oxidoreductase molybdopterin-binding subunit, IorB-related AM378_01695 9983624acb9f7731e14370dd73b68107 747 Gene3D G3DSA:3.30.365.10 44 181 5.3E-13 T 15-10-2018 AM378_01695 9983624acb9f7731e14370dd73b68107 747 Gene3D G3DSA:3.30.365.10 350 568 5.5E-47 T 15-10-2018 AM378_01695 9983624acb9f7731e14370dd73b68107 747 Gene3D G3DSA:3.90.1170.50 184 306 5.9E-8 T 15-10-2018 AM378_01695 9983624acb9f7731e14370dd73b68107 747 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 335 568 2.9E-28 T 15-10-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 AM378_01695 9983624acb9f7731e14370dd73b68107 747 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 619 695 9.7E-13 T 15-10-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 AM378_01695 9983624acb9f7731e14370dd73b68107 747 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 49 182 1.7E-6 T 15-10-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 AM378_01695 9983624acb9f7731e14370dd73b68107 747 Gene3D G3DSA:3.30.365.10 364 455 5.5E-47 T 15-10-2018 AM378_01695 9983624acb9f7731e14370dd73b68107 747 SUPERFAMILY SSF56003 334 741 2.21E-92 T 15-10-2018 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily GO:0016491|GO:0055114 AM378_01695 9983624acb9f7731e14370dd73b68107 747 Gene3D G3DSA:3.30.365.10 607 745 2.0E-31 T 15-10-2018 AM378_01695 9983624acb9f7731e14370dd73b68107 747 SMART SM01008 213 308 8.9E-9 T 15-10-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead AM378_01695 9983624acb9f7731e14370dd73b68107 747 SUPERFAMILY SSF56003 9 241 6.98E-25 T 15-10-2018 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily GO:0016491|GO:0055114 AM378_22635 0016a5d4527ad25d78b4ad2725cf0865 283 PIRSF PIRSF000903 1 274 7.4E-123 T 15-10-2018 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 AM378_22635 0016a5d4527ad25d78b4ad2725cf0865 283 Hamap MF_00199 Bis(5'-nucleosyl)-tetraphosphatase, symmetrical [apaH]. 1 271 51.637 T 15-10-2018 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 AM378_22635 0016a5d4527ad25d78b4ad2725cf0865 283 SUPERFAMILY SSF56300 1 259 1.26E-57 T 15-10-2018 AM378_22635 0016a5d4527ad25d78b4ad2725cf0865 283 Pfam PF00149 Calcineurin-like phosphoesterase 2 127 8.2E-14 T 15-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 AM378_22635 0016a5d4527ad25d78b4ad2725cf0865 283 TIGRFAM TIGR00668 apaH: bis(5'-nucleosyl)-tetraphosphatase (symmetrical) 1 271 1.7E-147 T 15-10-2018 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 AM378_22635 0016a5d4527ad25d78b4ad2725cf0865 283 Gene3D G3DSA:3.60.21.10 1 276 1.1E-82 T 15-10-2018 IPR029052 Metallo-dependent phosphatase-like AM378_03365 cf55c71fad00f18e71f83ef9f6790cfe 648 Gene3D G3DSA:3.40.50.300 1 272 2.4E-71 T 15-10-2018 AM378_03365 cf55c71fad00f18e71f83ef9f6790cfe 648 Pfam PF02687 FtsX-like permease family 553 641 6.2E-11 T 15-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 AM378_03365 cf55c71fad00f18e71f83ef9f6790cfe 648 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM378_03365 cf55c71fad00f18e71f83ef9f6790cfe 648 SUPERFAMILY SSF52540 4 228 1.43E-68 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_03365 cf55c71fad00f18e71f83ef9f6790cfe 648 Pfam PF12704 MacB-like periplasmic core domain 272 491 8.7E-39 T 15-10-2018 IPR025857 MacB-like periplasmic core domain AM378_03365 cf55c71fad00f18e71f83ef9f6790cfe 648 Pfam PF00005 ABC transporter 24 172 2.0E-30 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM378_03365 cf55c71fad00f18e71f83ef9f6790cfe 648 SMART SM00382 33 220 1.1E-15 T 15-10-2018 IPR003593 AAA+ ATPase domain AM378_21060 2eb79b9576f6272ec6b1238ed370737d 66 Pfam PF09838 Uncharacterized protein conserved in bacteria (DUF2065) 5 60 3.8E-22 T 15-10-2018 IPR019201 Protein of unknown function DUF2065 AM378_24160 1537fdebf810404e28226237d23e39fb 438 Pfam PF05525 Branched-chain amino acid transport protein 7 428 1.8E-151 T 15-10-2018 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 AM378_24160 1537fdebf810404e28226237d23e39fb 438 TIGRFAM TIGR00796 livcs: branched-chain amino acid transport system II carrier protein 14 415 4.4E-155 T 15-10-2018 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 AM378_14785 7f078fa59a209e2af0a00f780b2ef194 589 SMART SM00382 371 557 1.4E-14 T 15-10-2018 IPR003593 AAA+ ATPase domain AM378_14785 7f078fa59a209e2af0a00f780b2ef194 589 Pfam PF00664 ABC transporter transmembrane region 27 300 4.1E-35 T 15-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 AM378_14785 7f078fa59a209e2af0a00f780b2ef194 589 SUPERFAMILY SSF90123 5 334 1.26E-58 T 15-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 AM378_14785 7f078fa59a209e2af0a00f780b2ef194 589 Pfam PF00005 ABC transporter 362 511 4.7E-34 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM378_14785 7f078fa59a209e2af0a00f780b2ef194 589 SUPERFAMILY SSF52540 336 582 6.04E-92 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_14785 7f078fa59a209e2af0a00f780b2ef194 589 Gene3D G3DSA:1.20.1560.10 13 335 2.1E-115 T 15-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 AM378_14785 7f078fa59a209e2af0a00f780b2ef194 589 Gene3D G3DSA:3.40.50.300 337 589 5.0E-95 T 15-10-2018 AM378_14785 7f078fa59a209e2af0a00f780b2ef194 589 ProSitePatterns PS00211 ABC transporters family signature. 483 497 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM378_14865 6c60507c4ba8d97605a42b4e5c2b52f6 172 Gene3D G3DSA:3.40.50.360 1 171 3.7E-48 T 15-10-2018 IPR029039 Flavoprotein-like superfamily AM378_14865 6c60507c4ba8d97605a42b4e5c2b52f6 172 SUPERFAMILY SSF52218 1 166 2.48E-46 T 15-10-2018 IPR029039 Flavoprotein-like superfamily AM378_14865 6c60507c4ba8d97605a42b4e5c2b52f6 172 Pfam PF00258 Flavodoxin 5 160 1.0E-26 T 15-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 AM378_14865 6c60507c4ba8d97605a42b4e5c2b52f6 172 ProSitePatterns PS00201 Flavodoxin signature. 5 21 - T 15-10-2018 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 AM378_14865 6c60507c4ba8d97605a42b4e5c2b52f6 172 TIGRFAM TIGR01752 flav_long: flavodoxin 2 168 1.5E-70 T 15-10-2018 IPR010086 Flavodoxin, long chain GO:0010181 AM378_14865 6c60507c4ba8d97605a42b4e5c2b52f6 172 PIRSF PIRSF038996 1 170 3.5E-53 T 15-10-2018 IPR010086 Flavodoxin, long chain GO:0010181 AM378_17820 606d1795295e1bdc62e20c32fd785690 366 SUPERFAMILY SSF56796 4 356 6.28E-117 T 15-10-2018 AM378_17820 606d1795295e1bdc62e20c32fd785690 366 Gene3D G3DSA:1.20.1090.10 173 360 2.2E-65 T 15-10-2018 AM378_17820 606d1795295e1bdc62e20c32fd785690 366 PIRSF PIRSF001455 10 357 3.1E-105 T 15-10-2018 IPR030963 3-dehydroquinate synthase family GO:0009073|GO:0016838 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 AM378_17820 606d1795295e1bdc62e20c32fd785690 366 TIGRFAM TIGR01357 aroB: 3-dehydroquinate synthase 13 349 3.2E-120 T 15-10-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 AM378_17820 606d1795295e1bdc62e20c32fd785690 366 Hamap MF_00110 3-dehydroquinate synthase [aroB]. 1 360 74.542 T 15-10-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 AM378_17820 606d1795295e1bdc62e20c32fd785690 366 Gene3D G3DSA:3.40.50.1970 1 172 7.1E-63 T 15-10-2018 AM378_17820 606d1795295e1bdc62e20c32fd785690 366 Pfam PF01761 3-dehydroquinate synthase 67 325 1.2E-109 T 15-10-2018 IPR030960 3-dehydroquinate synthase domain KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 AM378_16150 5261223c539085ac681ab4b203169a6b 302 Pfam PF04865 Baseplate J-like protein 118 262 3.6E-24 T 15-10-2018 IPR006949 Baseplate protein J-like AM378_16150 5261223c539085ac681ab4b203169a6b 302 PIRSF PIRSF020481 1 302 6.3E-121 T 15-10-2018 IPR014507 Baseplate assembly protein J, predicted AM378_13165 06c1361c02beaaf0c3df708420cb7624 257 SUPERFAMILY SSF46785 4 59 1.8E-11 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM378_13165 06c1361c02beaaf0c3df708420cb7624 257 SUPERFAMILY SSF100950 73 233 5.3E-35 T 15-10-2018 IPR037171 NagB/RpiA transferase-like AM378_13165 06c1361c02beaaf0c3df708420cb7624 257 Pfam PF08220 DeoR-like helix-turn-helix domain 6 58 4.6E-17 T 15-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AM378_13165 06c1361c02beaaf0c3df708420cb7624 257 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 15-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 AM378_13165 06c1361c02beaaf0c3df708420cb7624 257 Pfam PF00455 DeoR C terminal sensor domain 74 232 5.9E-52 T 15-10-2018 IPR014036 DeoR C-terminal sensor domain AM378_13165 06c1361c02beaaf0c3df708420cb7624 257 SMART SM00420 6 58 8.9E-18 T 15-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AM378_13165 06c1361c02beaaf0c3df708420cb7624 257 Gene3D G3DSA:1.10.10.10 1 58 8.6E-7 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_13165 06c1361c02beaaf0c3df708420cb7624 257 SMART SM01134 72 233 1.3E-72 T 15-10-2018 AM378_10950 93657edb34ad3131dd35f742e612ef46 460 Gene3D G3DSA:2.150.10.10 241 452 1.9E-170 T 15-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal AM378_10950 93657edb34ad3131dd35f742e612ef46 460 PIRSF PIRSF001205 1 460 1.9E-175 T 15-10-2018 IPR016294 Peptidase M10B GO:0004222|GO:0005509|GO:0005615|GO:0006508|GO:0008270 AM378_10950 93657edb34ad3131dd35f742e612ef46 460 SUPERFAMILY SSF55486 9 234 1.02E-51 T 15-10-2018 AM378_10950 93657edb34ad3131dd35f742e612ef46 460 Pfam PF00413 Matrixin 55 196 1.4E-10 T 15-10-2018 IPR001818 Peptidase M10, metallopeptidase GO:0004222|GO:0006508|GO:0008270|GO:0031012 AM378_10950 93657edb34ad3131dd35f742e612ef46 460 Gene3D G3DSA:3.40.390.10 18 240 1.9E-170 T 15-10-2018 IPR024079 Metallopeptidase, catalytic domain superfamily GO:0008237 AM378_10950 93657edb34ad3131dd35f742e612ef46 460 Pfam PF08548 Peptidase M10 serralysin C terminal 236 460 1.6E-73 T 15-10-2018 IPR013858 Peptidase M10 serralysin, C-terminal GO:0005509|GO:0005615 AM378_10950 93657edb34ad3131dd35f742e612ef46 460 SUPERFAMILY SSF51120 238 457 3.53E-44 T 15-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal AM378_10950 93657edb34ad3131dd35f742e612ef46 460 SMART SM00235 47 216 2.9E-13 T 15-10-2018 IPR006026 Peptidase, metallopeptidase GO:0006508|GO:0008237|GO:0008270 AM378_10950 93657edb34ad3131dd35f742e612ef46 460 PRINTS PR00313 NodO calcium binding signature 357 366 3.9E-9 T 15-10-2018 AM378_10950 93657edb34ad3131dd35f742e612ef46 460 PRINTS PR00313 NodO calcium binding signature 318 329 3.9E-9 T 15-10-2018 AM378_10950 93657edb34ad3131dd35f742e612ef46 460 PRINTS PR00313 NodO calcium binding signature 339 347 3.9E-9 T 15-10-2018 AM378_10950 93657edb34ad3131dd35f742e612ef46 460 PRINTS PR00313 NodO calcium binding signature 348 356 3.9E-9 T 15-10-2018 AM378_13950 71b4cba66b2738334bdd9a7bb75c5154 143 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 29 77 2.3E-15 T 15-10-2018 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 AM378_13950 71b4cba66b2738334bdd9a7bb75c5154 143 Gene3D G3DSA:1.20.1290.10 2 143 3.8E-48 T 15-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 AM378_13950 71b4cba66b2738334bdd9a7bb75c5154 143 Pfam PF02627 Carboxymuconolactone decarboxylase family 18 94 7.1E-19 T 15-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 AM378_13950 71b4cba66b2738334bdd9a7bb75c5154 143 SUPERFAMILY SSF69118 6 142 1.92E-43 T 15-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 AM378_17685 0564b0b2d9df204cffd3dac0dc5d03df 289 ProSitePatterns PS00567 Phosphoribulokinase signature. 164 177 - T 15-10-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 AM378_17685 0564b0b2d9df204cffd3dac0dc5d03df 289 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 7 214 8.6E-73 T 15-10-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0016301 Reactome: R-HSA-73614 AM378_17685 0564b0b2d9df204cffd3dac0dc5d03df 289 Gene3D G3DSA:3.40.50.300 1 289 6.0E-115 T 15-10-2018 AM378_17685 0564b0b2d9df204cffd3dac0dc5d03df 289 PRINTS PR00478 Phosphoribulokinase family signature 12 29 9.3E-29 T 15-10-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 AM378_17685 0564b0b2d9df204cffd3dac0dc5d03df 289 PRINTS PR00478 Phosphoribulokinase family signature 126 144 9.3E-29 T 15-10-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 AM378_17685 0564b0b2d9df204cffd3dac0dc5d03df 289 PRINTS PR00478 Phosphoribulokinase family signature 164 181 9.3E-29 T 15-10-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 AM378_17685 0564b0b2d9df204cffd3dac0dc5d03df 289 PRINTS PR00478 Phosphoribulokinase family signature 182 205 9.3E-29 T 15-10-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 AM378_17685 0564b0b2d9df204cffd3dac0dc5d03df 289 SUPERFAMILY SSF52540 4 286 4.65E-45 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_22815 78e297393311dcf55d2754838ba51962 495 Pfam PF01225 Mur ligase family, catalytic domain 25 102 2.7E-12 T 15-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 AM378_22815 78e297393311dcf55d2754838ba51962 495 SUPERFAMILY SSF53623 105 337 5.36E-79 T 15-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 AM378_22815 78e297393311dcf55d2754838ba51962 495 Pfam PF02875 Mur ligase family, glutamate ligase domain 339 425 1.6E-25 T 15-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 AM378_22815 78e297393311dcf55d2754838ba51962 495 Gene3D G3DSA:3.40.1390.10 2 104 1.7E-35 T 15-10-2018 AM378_22815 78e297393311dcf55d2754838ba51962 495 Hamap MF_00208 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [murE]. 4 491 34.808 T 15-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 AM378_22815 78e297393311dcf55d2754838ba51962 495 TIGRFAM TIGR01085 murE: UDP-N-acetylmuramyl-tripeptide synthetase 22 491 9.7E-168 T 15-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 AM378_22815 78e297393311dcf55d2754838ba51962 495 Gene3D G3DSA:3.90.190.20 347 494 2.1E-56 T 15-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AM378_22815 78e297393311dcf55d2754838ba51962 495 Gene3D G3DSA:3.40.1190.10 105 342 5.6E-92 T 15-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 AM378_22815 78e297393311dcf55d2754838ba51962 495 Pfam PF08245 Mur ligase middle domain 114 318 1.1E-51 T 15-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 AM378_22815 78e297393311dcf55d2754838ba51962 495 SUPERFAMILY SSF63418 5 103 8.24E-24 T 15-10-2018 IPR035911 MurE/MurF, N-terminal AM378_22815 78e297393311dcf55d2754838ba51962 495 SUPERFAMILY SSF53244 339 491 1.04E-50 T 15-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AM378_22330 ee7b1ec6e092a83e6ac2504c8c0d5f7b 440 Gene3D G3DSA:3.90.1170.30 337 433 1.8E-34 T 15-10-2018 IPR036566 Pyrimidine nucleoside phosphorylase-like, C-terminal domain superfamily GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 AM378_22330 ee7b1ec6e092a83e6ac2504c8c0d5f7b 440 Pfam PF02885 Glycosyl transferase family, helical bundle domain 6 67 2.1E-18 T 15-10-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 AM378_22330 ee7b1ec6e092a83e6ac2504c8c0d5f7b 440 Gene3D G3DSA:3.40.1030.10 70 322 1.7E-130 T 15-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 AM378_22330 ee7b1ec6e092a83e6ac2504c8c0d5f7b 440 ProSitePatterns PS00647 Thymidine and pyrimidine-nucleoside phosphorylases signature. 113 128 - T 15-10-2018 IPR017872 Pyrimidine-nucleoside phosphorylase, conserved site GO:0006206 Reactome: R-HSA-73614|Reactome: R-HSA-73621 AM378_22330 ee7b1ec6e092a83e6ac2504c8c0d5f7b 440 SUPERFAMILY SSF52418 75 334 2.22E-88 T 15-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 AM378_22330 ee7b1ec6e092a83e6ac2504c8c0d5f7b 440 Hamap MF_01628 Thymidine phosphorylase [deoA]. 2 438 47.47 T 15-10-2018 IPR013465 Thymidine phosphorylase GO:0006213|GO:0009032 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181 AM378_22330 ee7b1ec6e092a83e6ac2504c8c0d5f7b 440 SMART SM00941 350 424 2.0E-33 T 15-10-2018 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 AM378_22330 ee7b1ec6e092a83e6ac2504c8c0d5f7b 440 TIGRFAM TIGR02643 T_phosphoryl: thymidine phosphorylase 2 438 6.8E-230 T 15-10-2018 IPR013465 Thymidine phosphorylase GO:0006213|GO:0009032 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181 AM378_22330 ee7b1ec6e092a83e6ac2504c8c0d5f7b 440 TIGRFAM TIGR02644 Y_phosphoryl: pyrimidine-nucleoside phosphorylase 5 423 6.4E-167 T 15-10-2018 IPR018090 Pyrimidine-nucleoside phosphorylase, bacterial/eukaryotic GO:0006213|GO:0016154 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181|Reactome: R-HSA-73614|Reactome: R-HSA-73621 AM378_22330 ee7b1ec6e092a83e6ac2504c8c0d5f7b 440 SUPERFAMILY SSF47648 3 70 5.49E-21 T 15-10-2018 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 AM378_22330 ee7b1ec6e092a83e6ac2504c8c0d5f7b 440 Pfam PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain 350 423 2.9E-25 T 15-10-2018 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 AM378_22330 ee7b1ec6e092a83e6ac2504c8c0d5f7b 440 Pfam PF00591 Glycosyl transferase family, a/b domain 79 309 3.4E-51 T 15-10-2018 IPR000312 Glycosyl transferase, family 3 GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 AM378_22330 ee7b1ec6e092a83e6ac2504c8c0d5f7b 440 PIRSF PIRSF000478 1 439 5.4E-155 T 15-10-2018 IPR000053 Thymidine/pyrimidine-nucleoside phosphorylase GO:0004645|GO:0006206 Reactome: R-HSA-73614|Reactome: R-HSA-73621 AM378_22330 ee7b1ec6e092a83e6ac2504c8c0d5f7b 440 Gene3D G3DSA:1.20.970.10 7 195 1.7E-130 T 15-10-2018 AM378_22330 ee7b1ec6e092a83e6ac2504c8c0d5f7b 440 SUPERFAMILY SSF54680 337 439 1.31E-33 T 15-10-2018 IPR036566 Pyrimidine nucleoside phosphorylase-like, C-terminal domain superfamily GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 AM378_03220 af60ec76feb231b520ff87857f06c26e 377 Pfam PF08402 TOBE domain 295 375 6.2E-19 T 15-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 AM378_03220 af60ec76feb231b520ff87857f06c26e 377 Gene3D G3DSA:2.40.50.940 239 301 4.4E-11 T 15-10-2018 AM378_03220 af60ec76feb231b520ff87857f06c26e 377 TIGRFAM TIGR01187 potA: polyamine ABC transporter, ATP-binding protein 50 375 1.3E-147 T 15-10-2018 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit GO:0015417|GO:0015846|GO:0043190 AM378_03220 af60ec76feb231b520ff87857f06c26e 377 Pfam PF00005 ABC transporter 36 177 5.5E-39 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM378_03220 af60ec76feb231b520ff87857f06c26e 377 Gene3D G3DSA:3.40.50.300 19 238 5.5E-71 T 15-10-2018 AM378_03220 af60ec76feb231b520ff87857f06c26e 377 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM378_03220 af60ec76feb231b520ff87857f06c26e 377 SMART SM00382 44 227 7.4E-20 T 15-10-2018 IPR003593 AAA+ ATPase domain AM378_03220 af60ec76feb231b520ff87857f06c26e 377 SUPERFAMILY SSF52540 19 257 6.39E-89 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_03220 af60ec76feb231b520ff87857f06c26e 377 Gene3D G3DSA:2.40.50.140 302 355 4.4E-11 T 15-10-2018 AM378_03220 af60ec76feb231b520ff87857f06c26e 377 SUPERFAMILY SSF50331 253 375 3.4E-15 T 15-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal AM378_18650 8d71914fd37f843e98b7ed35cf721d35 457 Gene3D G3DSA:1.20.200.10 108 446 1.8E-151 T 15-10-2018 AM378_18650 8d71914fd37f843e98b7ed35cf721d35 457 Pfam PF00206 Lyase 6 301 4.2E-98 T 15-10-2018 IPR022761 Fumarate lyase, N-terminal AM378_18650 8d71914fd37f843e98b7ed35cf721d35 457 Pfam PF14698 Argininosuccinate lyase C-terminal 364 431 2.8E-23 T 15-10-2018 IPR029419 Argininosuccinate lyase, C-terminal KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 AM378_18650 8d71914fd37f843e98b7ed35cf721d35 457 Hamap MF_00006 Argininosuccinate lyase [argH]. 2 454 41.285 T 15-10-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 AM378_18650 8d71914fd37f843e98b7ed35cf721d35 457 SUPERFAMILY SSF48557 3 456 7.23E-144 T 15-10-2018 IPR008948 L-Aspartase-like GO:0003824 AM378_18650 8d71914fd37f843e98b7ed35cf721d35 457 Gene3D G3DSA:1.10.275.10 1 107 1.2E-36 T 15-10-2018 IPR024083 Fumarase/histidase, N-terminal AM378_18650 8d71914fd37f843e98b7ed35cf721d35 457 ProSitePatterns PS00163 Fumarate lyases signature. 276 285 - T 15-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 AM378_18650 8d71914fd37f843e98b7ed35cf721d35 457 Gene3D G3DSA:1.10.40.30 363 433 1.8E-151 T 15-10-2018 AM378_18650 8d71914fd37f843e98b7ed35cf721d35 457 PRINTS PR00145 Argininosuccinate lyase family signature 194 210 1.1E-69 T 15-10-2018 AM378_18650 8d71914fd37f843e98b7ed35cf721d35 457 PRINTS PR00145 Argininosuccinate lyase family signature 143 163 1.1E-69 T 15-10-2018 AM378_18650 8d71914fd37f843e98b7ed35cf721d35 457 PRINTS PR00145 Argininosuccinate lyase family signature 232 256 1.1E-69 T 15-10-2018 AM378_18650 8d71914fd37f843e98b7ed35cf721d35 457 PRINTS PR00145 Argininosuccinate lyase family signature 102 124 1.1E-69 T 15-10-2018 AM378_18650 8d71914fd37f843e98b7ed35cf721d35 457 PRINTS PR00145 Argininosuccinate lyase family signature 311 330 1.1E-69 T 15-10-2018 AM378_18650 8d71914fd37f843e98b7ed35cf721d35 457 PRINTS PR00145 Argininosuccinate lyase family signature 276 292 1.1E-69 T 15-10-2018 AM378_18650 8d71914fd37f843e98b7ed35cf721d35 457 PRINTS PR00149 Fumarate lyase superfamily signature 103 121 5.1E-29 T 15-10-2018 IPR000362 Fumarate lyase family AM378_18650 8d71914fd37f843e98b7ed35cf721d35 457 PRINTS PR00149 Fumarate lyase superfamily signature 148 166 5.1E-29 T 15-10-2018 IPR000362 Fumarate lyase family AM378_18650 8d71914fd37f843e98b7ed35cf721d35 457 PRINTS PR00149 Fumarate lyase superfamily signature 232 259 5.1E-29 T 15-10-2018 IPR000362 Fumarate lyase family AM378_18650 8d71914fd37f843e98b7ed35cf721d35 457 PRINTS PR00149 Fumarate lyase superfamily signature 276 292 5.1E-29 T 15-10-2018 IPR000362 Fumarate lyase family AM378_18650 8d71914fd37f843e98b7ed35cf721d35 457 TIGRFAM TIGR00838 argH: argininosuccinate lyase 3 456 2.3E-212 T 15-10-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 AM378_16680 ac1413be18c8b7c5e5686e595a1d90bc 638 Gene3D G3DSA:3.40.930.10 495 631 3.6E-18 T 15-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 AM378_16680 ac1413be18c8b7c5e5686e595a1d90bc 638 SUPERFAMILY SSF52794 402 479 4.55E-6 T 15-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 AM378_16680 ac1413be18c8b7c5e5686e595a1d90bc 638 Pfam PF08279 HTH domain 17 64 1.1E-7 T 15-10-2018 IPR013196 Helix-turn-helix, type 11 AM378_16680 ac1413be18c8b7c5e5686e595a1d90bc 638 Pfam PF00874 PRD domain 301 387 1.3E-20 T 15-10-2018 IPR011608 PRD domain GO:0006355 AM378_16680 ac1413be18c8b7c5e5686e595a1d90bc 638 Gene3D G3DSA:1.10.10.10 9 152 2.2E-8 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_16680 ac1413be18c8b7c5e5686e595a1d90bc 638 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 496 628 5.5E-17 T 15-10-2018 IPR002178 PTS EIIA type-2 domain AM378_16680 ac1413be18c8b7c5e5686e595a1d90bc 638 Gene3D G3DSA:1.10.1790.10 295 390 7.8E-19 T 15-10-2018 AM378_16680 ac1413be18c8b7c5e5686e595a1d90bc 638 ProSitePatterns PS00894 DeoR-type HTH domain signature. 8 41 - T 15-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 AM378_16680 ac1413be18c8b7c5e5686e595a1d90bc 638 Pfam PF05043 Mga helix-turn-helix domain 83 166 2.7E-13 T 15-10-2018 IPR007737 Mga helix-turn-helix domain AM378_16680 ac1413be18c8b7c5e5686e595a1d90bc 638 SUPERFAMILY SSF63520 293 392 4.45E-23 T 15-10-2018 IPR036634 PRD domain superfamily GO:0006355 AM378_16680 ac1413be18c8b7c5e5686e595a1d90bc 638 SUPERFAMILY SSF55804 491 629 9.94E-25 T 15-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 AM378_00845 7cfff42869ffef571469208a0370935a 266 Gene3D G3DSA:3.40.50.1360 1 266 9.6E-117 T 15-10-2018 AM378_00845 7cfff42869ffef571469208a0370935a 266 TIGRFAM TIGR00502 nagB: glucosamine-6-phosphate deaminase 1 259 2.7E-138 T 15-10-2018 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70171 AM378_00845 7cfff42869ffef571469208a0370935a 266 ProSitePatterns PS01161 Glucosamine/galactosamine-6-phosphate isomerases signature. 125 143 - T 15-10-2018 IPR018321 Glucosamine-6-phosphate isomerase, conserved site GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70171 AM378_00845 7cfff42869ffef571469208a0370935a 266 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 8 230 1.7E-20 T 15-10-2018 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 AM378_00845 7cfff42869ffef571469208a0370935a 266 SUPERFAMILY SSF100950 1 263 5.44E-104 T 15-10-2018 IPR037171 NagB/RpiA transferase-like AM378_00845 7cfff42869ffef571469208a0370935a 266 Hamap MF_01241 Glucosamine-6-phosphate deaminase [nagB]. 1 247 40.845 T 15-10-2018 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70171 AM378_09805 bdbae023b6082a92d8794df733683900 166 Pfam PF01584 CheW-like domain 18 154 1.6E-37 T 15-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 AM378_09805 bdbae023b6082a92d8794df733683900 166 Gene3D G3DSA:2.40.50.180 37 146 1.8E-40 T 15-10-2018 AM378_09805 bdbae023b6082a92d8794df733683900 166 Gene3D G3DSA:2.30.30.40 20 145 1.8E-40 T 15-10-2018 AM378_09805 bdbae023b6082a92d8794df733683900 166 SUPERFAMILY SSF50341 17 157 6.93E-40 T 15-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 AM378_09805 bdbae023b6082a92d8794df733683900 166 SMART SM00260 14 151 4.8E-45 T 15-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 AM378_17980 aace2d56b7b6435f5ed02818773ad9b0 228 SMART SM01007 6 194 3.9E-66 T 15-10-2018 IPR001303 Class II aldolase/adducin N-terminal AM378_17980 aace2d56b7b6435f5ed02818773ad9b0 228 Gene3D G3DSA:3.40.225.10 1 227 1.7E-59 T 15-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily AM378_17980 aace2d56b7b6435f5ed02818773ad9b0 228 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 7 193 2.6E-48 T 15-10-2018 IPR001303 Class II aldolase/adducin N-terminal AM378_17980 aace2d56b7b6435f5ed02818773ad9b0 228 SUPERFAMILY SSF53639 2 219 7.65E-67 T 15-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily AM378_23455 e5738af3afaa26443f37d12946714573 155 Pfam PF00075 RNase H 3 141 1.1E-52 T 15-10-2018 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 AM378_23455 e5738af3afaa26443f37d12946714573 155 SUPERFAMILY SSF53098 4 146 3.54E-57 T 15-10-2018 IPR012337 Ribonuclease H-like superfamily AM378_23455 e5738af3afaa26443f37d12946714573 155 Gene3D G3DSA:3.30.420.10 1 155 4.7E-60 T 15-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AM378_23455 e5738af3afaa26443f37d12946714573 155 Hamap MF_00042 Ribonuclease H [rnhA]. 2 150 37.105 T 15-10-2018 IPR022892 Ribonuclease HI GO:0004523 AM378_07715 e3dadeecd80e46a4fef2cdcfede98e2c 324 Gene3D G3DSA:3.20.20.120 116 320 1.6E-59 T 15-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily AM378_07715 e3dadeecd80e46a4fef2cdcfede98e2c 324 Gene3D G3DSA:3.30.390.10 1 104 1.7E-31 T 15-10-2018 IPR029017 Enolase-like, N-terminal AM378_07715 e3dadeecd80e46a4fef2cdcfede98e2c 324 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 3 109 1.0E-19 T 15-10-2018 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain AM378_07715 e3dadeecd80e46a4fef2cdcfede98e2c 324 SUPERFAMILY SSF51604 118 317 9.04E-54 T 15-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily AM378_07715 e3dadeecd80e46a4fef2cdcfede98e2c 324 ProSitePatterns PS00909 Mandelate racemase / muconate lactonizing enzyme family signature 2. 173 204 - T 15-10-2018 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 AM378_07715 e3dadeecd80e46a4fef2cdcfede98e2c 324 Pfam PF13378 Enolase C-terminal domain-like 134 295 1.0E-27 T 15-10-2018 IPR029065 Enolase C-terminal domain-like AM378_07715 e3dadeecd80e46a4fef2cdcfede98e2c 324 SUPERFAMILY SSF54826 2 112 1.55E-31 T 15-10-2018 AM378_07715 e3dadeecd80e46a4fef2cdcfede98e2c 324 SMART SM00922 130 223 2.0E-21 T 15-10-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal AM378_02670 83799a47a7989e555cbe9ab00fbe139a 675 SUPERFAMILY SSF47323 390 547 4.11E-46 T 15-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM378_02670 83799a47a7989e555cbe9ab00fbe139a 675 SUPERFAMILY SSF52374 6 387 4.1E-105 T 15-10-2018 AM378_02670 83799a47a7989e555cbe9ab00fbe139a 675 Pfam PF01588 Putative tRNA binding domain 579 672 2.5E-21 T 15-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 AM378_02670 83799a47a7989e555cbe9ab00fbe139a 675 Gene3D G3DSA:1.10.730.10 389 526 2.5E-34 T 15-10-2018 AM378_02670 83799a47a7989e555cbe9ab00fbe139a 675 Gene3D G3DSA:3.40.50.620 9 384 3.7E-163 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM378_02670 83799a47a7989e555cbe9ab00fbe139a 675 SUPERFAMILY SSF57770 142 176 8.11E-13 T 15-10-2018 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 AM378_02670 83799a47a7989e555cbe9ab00fbe139a 675 SUPERFAMILY SSF50249 568 674 4.9E-28 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold AM378_02670 83799a47a7989e555cbe9ab00fbe139a 675 Gene3D G3DSA:2.20.28.20 142 176 3.7E-163 T 15-10-2018 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 AM378_02670 83799a47a7989e555cbe9ab00fbe139a 675 Gene3D G3DSA:2.40.50.140 566 675 9.1E-30 T 15-10-2018 AM378_02670 83799a47a7989e555cbe9ab00fbe139a 675 PRINTS PR01041 Methionyl-tRNA synthetase signature 90 101 4.8E-26 T 15-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 AM378_02670 83799a47a7989e555cbe9ab00fbe139a 675 PRINTS PR01041 Methionyl-tRNA synthetase signature 42 56 4.8E-26 T 15-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 AM378_02670 83799a47a7989e555cbe9ab00fbe139a 675 PRINTS PR01041 Methionyl-tRNA synthetase signature 10 23 4.8E-26 T 15-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 AM378_02670 83799a47a7989e555cbe9ab00fbe139a 675 PRINTS PR01041 Methionyl-tRNA synthetase signature 251 262 4.8E-26 T 15-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 AM378_02670 83799a47a7989e555cbe9ab00fbe139a 675 PRINTS PR01041 Methionyl-tRNA synthetase signature 384 395 4.8E-26 T 15-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 AM378_02670 83799a47a7989e555cbe9ab00fbe139a 675 PRINTS PR01041 Methionyl-tRNA synthetase signature 291 306 4.8E-26 T 15-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 AM378_02670 83799a47a7989e555cbe9ab00fbe139a 675 Hamap MF_00098 Methionine--tRNA ligase [metG]. 6 545 41.845 T 15-10-2018 IPR023458 Methionine-tRNA ligase, type 1 GO:0004825 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 AM378_02670 83799a47a7989e555cbe9ab00fbe139a 675 TIGRFAM TIGR00399 metG_C_term: methionine--tRNA ligase, beta subunit 540 675 6.2E-46 T 15-10-2018 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 AM378_02670 83799a47a7989e555cbe9ab00fbe139a 675 TIGRFAM TIGR00398 metG: methionine--tRNA ligase 9 535 3.2E-202 T 15-10-2018 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 AM378_02670 83799a47a7989e555cbe9ab00fbe139a 675 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 15 26 - T 15-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM378_02670 83799a47a7989e555cbe9ab00fbe139a 675 Pfam PF09334 tRNA synthetases class I (M) 9 396 7.8E-165 T 15-10-2018 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM378_08390 bea091e1bc4cae577c330e04ede1077f 369 Gene3D G3DSA:3.40.250.10 12 134 3.3E-32 T 15-10-2018 IPR036873 Rhodanese-like domain superfamily AM378_08390 bea091e1bc4cae577c330e04ede1077f 369 SMART SM00450 4 134 2.9E-10 T 15-10-2018 IPR001763 Rhodanese-like domain AM378_08390 bea091e1bc4cae577c330e04ede1077f 369 TIGRFAM TIGR03167 tRNA_sel_U_synt: tRNA 2-selenouridine synthase 18 348 3.5E-102 T 15-10-2018 IPR017582 tRNA 2-selenouridine/geranyl-2-thiouridine synthase GO:0016785|GO:0043828|GO:0070329 AM378_08390 bea091e1bc4cae577c330e04ede1077f 369 SUPERFAMILY SSF52821 16 146 2.06E-19 T 15-10-2018 IPR036873 Rhodanese-like domain superfamily AM378_08390 bea091e1bc4cae577c330e04ede1077f 369 SUPERFAMILY SSF52540 144 280 4.57E-6 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_08390 bea091e1bc4cae577c330e04ede1077f 369 Hamap MF_01622 tRNA 2-selenouridine synthase [selU]. 3 363 51.003 T 15-10-2018 IPR017582 tRNA 2-selenouridine/geranyl-2-thiouridine synthase GO:0016785|GO:0043828|GO:0070329 AM378_19530 cc18e98c100970070b187dcb2a69e379 344 Pfam PF00356 Bacterial regulatory proteins, lacI family 14 60 2.7E-10 T 15-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM378_19530 cc18e98c100970070b187dcb2a69e379 344 SMART SM00354 12 83 3.1E-25 T 15-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM378_19530 cc18e98c100970070b187dcb2a69e379 344 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 73 320 4.4E-21 T 15-10-2018 IPR001761 Periplasmic binding protein/LacI sugar binding domain AM378_19530 cc18e98c100970070b187dcb2a69e379 344 SUPERFAMILY SSF47413 12 71 3.09E-12 T 15-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AM378_19530 cc18e98c100970070b187dcb2a69e379 344 Gene3D G3DSA:3.40.50.2300 170 303 6.9E-65 T 15-10-2018 AM378_19530 cc18e98c100970070b187dcb2a69e379 344 Gene3D G3DSA:1.10.260.40 14 71 1.7E-15 T 15-10-2018 AM378_19530 cc18e98c100970070b187dcb2a69e379 344 Gene3D G3DSA:3.40.50.2300 75 322 6.9E-65 T 15-10-2018 AM378_19530 cc18e98c100970070b187dcb2a69e379 344 SUPERFAMILY SSF53822 70 326 6.67E-57 T 15-10-2018 IPR028082 Periplasmic binding protein-like I AM378_19485 af6678e31d61a54c9fafe9d27d647549 552 Pfam PF06826 Predicted Permease Membrane Region 11 179 4.6E-44 T 15-10-2018 IPR006512 YidE/YbjL duplication AM378_19485 af6678e31d61a54c9fafe9d27d647549 552 Pfam PF06826 Predicted Permease Membrane Region 374 546 1.4E-45 T 15-10-2018 IPR006512 YidE/YbjL duplication AM378_19485 af6678e31d61a54c9fafe9d27d647549 552 Hamap MF_01016 Putative transport protein YidE [yidE]. 1 552 54.739 T 15-10-2018 IPR023018 Transport protein YidE, putative AM378_19485 af6678e31d61a54c9fafe9d27d647549 552 Pfam PF02080 TrkA-C domain 293 359 4.3E-11 T 15-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AM378_19485 af6678e31d61a54c9fafe9d27d647549 552 SUPERFAMILY SSF116726 207 271 2.75E-8 T 15-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 AM378_19485 af6678e31d61a54c9fafe9d27d647549 552 Gene3D G3DSA:3.30.70.1450 288 364 5.3E-11 T 15-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 AM378_19485 af6678e31d61a54c9fafe9d27d647549 552 TIGRFAM TIGR01625 YidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain 16 166 8.0E-40 T 15-10-2018 IPR006512 YidE/YbjL duplication AM378_19485 af6678e31d61a54c9fafe9d27d647549 552 TIGRFAM TIGR01625 YidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain 379 533 1.1E-48 T 15-10-2018 IPR006512 YidE/YbjL duplication AM378_19485 af6678e31d61a54c9fafe9d27d647549 552 Gene3D G3DSA:3.30.70.1450 197 274 1.1E-8 T 15-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 AM378_19485 af6678e31d61a54c9fafe9d27d647549 552 SUPERFAMILY SSF116726 287 360 5.49E-13 T 15-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 AM378_00050 9f9f1cab658c842f0c12d5925ecfc27c 592 Gene3D G3DSA:1.20.1560.10 1 328 1.5E-72 T 15-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 AM378_00050 9f9f1cab658c842f0c12d5925ecfc27c 592 Pfam PF00005 ABC transporter 357 505 3.3E-29 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM378_00050 9f9f1cab658c842f0c12d5925ecfc27c 592 SUPERFAMILY SSF52540 336 576 5.79E-78 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_00050 9f9f1cab658c842f0c12d5925ecfc27c 592 Gene3D G3DSA:3.40.50.300 335 590 3.2E-82 T 15-10-2018 AM378_00050 9f9f1cab658c842f0c12d5925ecfc27c 592 SUPERFAMILY SSF90123 9 324 1.44E-67 T 15-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 AM378_00050 9f9f1cab658c842f0c12d5925ecfc27c 592 ProSitePatterns PS00211 ABC transporters family signature. 477 491 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM378_00050 9f9f1cab658c842f0c12d5925ecfc27c 592 SMART SM00382 366 557 1.4E-13 T 15-10-2018 IPR003593 AAA+ ATPase domain AM378_00050 9f9f1cab658c842f0c12d5925ecfc27c 592 Pfam PF00664 ABC transporter transmembrane region 26 295 6.0E-40 T 15-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 AM378_11790 b9ccb61b89b2f02eba7b4748544d167a 598 ProDom PD001581 OXIDOREDUCTASE SUBUNIT NADH DEHYDROGENASE CHAIN C NAD DEHYDROGENASE UBIQUINONE F420H2 103 158 2.0E-25 T 15-10-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM378_11790 b9ccb61b89b2f02eba7b4748544d167a 598 Gene3D G3DSA:3.30.460.80 8 155 1.2E-35 T 15-10-2018 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM378_11790 b9ccb61b89b2f02eba7b4748544d167a 598 SUPERFAMILY SSF143243 23 227 1.83E-60 T 15-10-2018 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM378_11790 b9ccb61b89b2f02eba7b4748544d167a 598 SUPERFAMILY SSF56762 223 598 2.62E-119 T 15-10-2018 IPR029014 [NiFe]-hydrogenase, large subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM378_11790 b9ccb61b89b2f02eba7b4748544d167a 598 Hamap MF_01359 NADH-quinone oxidoreductase subunit C/D [nuoC]. 14 598 72.779 T 15-10-2018 IPR023062 NADH dehydrogenase, subunit CD GO:0030964|GO:0050136|GO:0055114 KEGG: 00190+1.6.5.11 AM378_11790 b9ccb61b89b2f02eba7b4748544d167a 598 Hamap MF_01357 NAD(P)H-quinone oxidoreductase subunit J, chloroplastic [ndhJ]. 23 183 25.474 T 15-10-2018 IPR010218 NADH dehydrogenase, subunit C GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM378_11790 b9ccb61b89b2f02eba7b4748544d167a 598 Hamap MF_01358 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic [ndhH]. 209 598 42.075 T 15-10-2018 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM378_11790 b9ccb61b89b2f02eba7b4748544d167a 598 Pfam PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit 48 175 1.3E-42 T 15-10-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM378_11790 b9ccb61b89b2f02eba7b4748544d167a 598 TIGRFAM TIGR01962 NuoD: NADH dehydrogenase (quinone), D subunit 213 598 1.7E-175 T 15-10-2018 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM378_11790 b9ccb61b89b2f02eba7b4748544d167a 598 ProSitePatterns PS00535 Respiratory chain NADH dehydrogenase 49 Kd subunit signature. 250 261 - T 15-10-2018 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM378_11790 b9ccb61b89b2f02eba7b4748544d167a 598 Gene3D G3DSA:1.10.645.20 212 598 2.7E-142 T 15-10-2018 IPR038290 NADH-quinone oxidoreductase, subunit D superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM378_11790 b9ccb61b89b2f02eba7b4748544d167a 598 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 327 598 2.0E-102 T 15-10-2018 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM378_11790 b9ccb61b89b2f02eba7b4748544d167a 598 TIGRFAM TIGR01961 NuoC_fam: NADH (or F420H2) dehydrogenase, subunit C 47 174 1.0E-45 T 15-10-2018 IPR010218 NADH dehydrogenase, subunit C GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM378_14650 1b0b64f4711c5870f91672b680b0c6d9 550 Gene3D G3DSA:3.40.50.300 319 548 3.6E-39 T 15-10-2018 AM378_14650 1b0b64f4711c5870f91672b680b0c6d9 550 Pfam PF00005 ABC transporter 345 480 3.0E-24 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM378_14650 1b0b64f4711c5870f91672b680b0c6d9 550 SMART SM00382 351 536 1.9E-13 T 15-10-2018 IPR003593 AAA+ ATPase domain AM378_14650 1b0b64f4711c5870f91672b680b0c6d9 550 ProSitePatterns PS00211 ABC transporters family signature. 453 467 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM378_14650 1b0b64f4711c5870f91672b680b0c6d9 550 SUPERFAMILY SSF90123 4 299 2.49E-26 T 15-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 AM378_14650 1b0b64f4711c5870f91672b680b0c6d9 550 SUPERFAMILY SSF52540 318 535 2.76E-41 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_14650 1b0b64f4711c5870f91672b680b0c6d9 550 Gene3D G3DSA:1.20.1560.10 2 306 6.7E-22 T 15-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 AM378_14650 1b0b64f4711c5870f91672b680b0c6d9 550 TIGRFAM TIGR01194 cyc_pep_trnsptr: cyclic peptide transporter 2 529 5.4E-112 T 15-10-2018 IPR005898 Cyclic peptide transporter GO:0005524|GO:0015833|GO:0016021|GO:1904680 AM378_05910 cdf523a16ca27251b54e298862749b26 424 Pfam PF01479 S4 domain 359 402 3.5E-6 T 15-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM378_05910 cdf523a16ca27251b54e298862749b26 424 Gene3D G3DSA:3.40.50.620 1 227 2.0E-93 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM378_05910 cdf523a16ca27251b54e298862749b26 424 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 188 210 1.3E-31 T 15-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 AM378_05910 cdf523a16ca27251b54e298862749b26 424 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 46 68 1.3E-31 T 15-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 AM378_05910 cdf523a16ca27251b54e298862749b26 424 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 167 182 1.3E-31 T 15-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 AM378_05910 cdf523a16ca27251b54e298862749b26 424 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 221 233 1.3E-31 T 15-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 AM378_05910 cdf523a16ca27251b54e298862749b26 424 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 52 - T 15-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM378_05910 cdf523a16ca27251b54e298862749b26 424 SUPERFAMILY SSF52374 4 328 7.36E-107 T 15-10-2018 AM378_05910 cdf523a16ca27251b54e298862749b26 424 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 2 423 2.2E-141 T 15-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 AM378_05910 cdf523a16ca27251b54e298862749b26 424 Gene3D G3DSA:3.10.290.10 330 424 7.0E-28 T 15-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 AM378_05910 cdf523a16ca27251b54e298862749b26 424 Hamap MF_02006 Tyrosine--tRNA ligase [tyrS]. 4 423 45.643 T 15-10-2018 IPR024107 Tyrosine-tRNA ligase, bacterial-type, type 1 GO:0004831 KEGG: 00970+6.1.1.1 AM378_05910 cdf523a16ca27251b54e298862749b26 424 SUPERFAMILY SSF55174 327 423 7.98E-20 T 15-10-2018 AM378_05910 cdf523a16ca27251b54e298862749b26 424 SMART SM00363 357 419 8.8E-5 T 15-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM378_05910 cdf523a16ca27251b54e298862749b26 424 Gene3D G3DSA:1.10.240.10 228 329 2.7E-35 T 15-10-2018 AM378_05910 cdf523a16ca27251b54e298862749b26 424 Pfam PF00579 tRNA synthetases class I (W and Y) 31 328 9.9E-89 T 15-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM378_14675 9d601ed2a9365c1fa6f94f402e9d07d1 353 Gene3D G3DSA:2.60.40.1090 218 352 1.5E-15 T 15-10-2018 IPR036937 Fimbrial-type adhesion domain superfamily GO:0007155|GO:0009289 AM378_14675 9d601ed2a9365c1fa6f94f402e9d07d1 353 SUPERFAMILY SSF49401 215 350 2.04E-14 T 15-10-2018 IPR008966 Adhesion domain superfamily AM378_14675 9d601ed2a9365c1fa6f94f402e9d07d1 353 Pfam PF00419 Fimbrial protein 207 353 4.1E-19 T 15-10-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM378_19275 cc18928ed3415c544d28002abbf65bc7 259 TIGRFAM TIGR01131 ATP_synt_6_or_A: ATP synthase F0, A subunit 18 254 4.6E-43 T 15-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM378_19275 cc18928ed3415c544d28002abbf65bc7 259 PRINTS PR00123 ATP synthase A subunit signature 92 108 4.2E-15 T 15-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM378_19275 cc18928ed3415c544d28002abbf65bc7 259 PRINTS PR00123 ATP synthase A subunit signature 191 213 4.2E-15 T 15-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM378_19275 cc18928ed3415c544d28002abbf65bc7 259 PRINTS PR00123 ATP synthase A subunit signature 239 254 4.2E-15 T 15-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM378_19275 cc18928ed3415c544d28002abbf65bc7 259 Gene3D G3DSA:1.20.120.220 83 259 2.6E-70 T 15-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM378_19275 cc18928ed3415c544d28002abbf65bc7 259 Hamap MF_01393 ATP synthase subunit a [atpB]. 13 259 16.285 T 15-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM378_19275 cc18928ed3415c544d28002abbf65bc7 259 Pfam PF00119 ATP synthase A chain 34 253 2.0E-56 T 15-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM378_19275 cc18928ed3415c544d28002abbf65bc7 259 SUPERFAMILY SSF81336 83 253 1.44E-49 T 15-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM378_19275 cc18928ed3415c544d28002abbf65bc7 259 ProSitePatterns PS00449 ATP synthase a subunit signature. 194 203 - T 15-10-2018 IPR023011 ATP synthase, F0 complex, subunit A, active site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM378_06250 4205d5ccaec369023bd94aaa2bc07eba 174 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 11 163 2.5E-20 T 15-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 AM378_06250 4205d5ccaec369023bd94aaa2bc07eba 174 Gene3D G3DSA:1.10.10.10 94 164 2.2E-10 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_06250 4205d5ccaec369023bd94aaa2bc07eba 174 Gene3D G3DSA:1.10.1740.10 1 77 2.0E-9 T 15-10-2018 AM378_06250 4205d5ccaec369023bd94aaa2bc07eba 174 SUPERFAMILY SSF88946 9 100 6.28E-14 T 15-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 AM378_06250 4205d5ccaec369023bd94aaa2bc07eba 174 Pfam PF08281 Sigma-70, region 4 110 163 5.6E-15 T 15-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM378_06250 4205d5ccaec369023bd94aaa2bc07eba 174 SUPERFAMILY SSF88659 107 163 3.92E-12 T 15-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like AM378_06250 4205d5ccaec369023bd94aaa2bc07eba 174 Pfam PF04542 Sigma-70 region 2 15 80 7.7E-13 T 15-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 AM378_15515 c8c77ea7207ac4029a313fc73ec4d318 411 PRINTS PR00605 Class IC cytochrome C signature 368 390 5.9E-6 T 15-10-2018 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 AM378_15515 c8c77ea7207ac4029a313fc73ec4d318 411 PRINTS PR00605 Class IC cytochrome C signature 315 326 5.9E-6 T 15-10-2018 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 AM378_15515 c8c77ea7207ac4029a313fc73ec4d318 411 Gene3D G3DSA:1.10.760.10 295 411 2.1E-24 T 15-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM378_15515 c8c77ea7207ac4029a313fc73ec4d318 411 SUPERFAMILY SSF46626 308 410 1.45E-17 T 15-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM378_15515 c8c77ea7207ac4029a313fc73ec4d318 411 PIRSF PIRSF000018 10 411 9.1E-124 T 15-10-2018 IPR014353 Membrane-bound alcohol dehydrogenase, cytochrome c subunit GO:0005506|GO:0016020|GO:0016614|GO:0020037 AM378_15515 c8c77ea7207ac4029a313fc73ec4d318 411 Gene3D G3DSA:1.10.760.10 160 294 9.1E-6 T 15-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM378_15515 c8c77ea7207ac4029a313fc73ec4d318 411 Gene3D G3DSA:1.10.760.10 1 146 1.1E-18 T 15-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM378_15515 c8c77ea7207ac4029a313fc73ec4d318 411 SUPERFAMILY SSF46626 32 163 8.02E-27 T 15-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM378_15515 c8c77ea7207ac4029a313fc73ec4d318 411 Pfam PF00034 Cytochrome c 43 142 1.1E-8 T 15-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM378_15515 c8c77ea7207ac4029a313fc73ec4d318 411 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 307 390 1.8E-8 T 15-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM378_15515 c8c77ea7207ac4029a313fc73ec4d318 411 SUPERFAMILY SSF46626 189 300 1.93E-11 T 15-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM378_17870 ae4fda5ffe329ced38a5e43a842cefc3 226 Gene3D G3DSA:3.40.50.1000 9 204 2.3E-26 T 15-10-2018 IPR023214 HAD superfamily AM378_17870 ae4fda5ffe329ced38a5e43a842cefc3 226 SUPERFAMILY SSF56784 6 213 1.05E-42 T 15-10-2018 IPR036412 HAD-like superfamily AM378_17870 ae4fda5ffe329ced38a5e43a842cefc3 226 Pfam PF13419 Haloacid dehalogenase-like hydrolase 13 190 2.0E-10 T 15-10-2018 AM378_17870 ae4fda5ffe329ced38a5e43a842cefc3 226 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 154 174 1.8E-7 T 15-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AM378_17870 ae4fda5ffe329ced38a5e43a842cefc3 226 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 10 21 1.8E-7 T 15-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AM378_17870 ae4fda5ffe329ced38a5e43a842cefc3 226 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 181 194 1.8E-7 T 15-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AM378_17870 ae4fda5ffe329ced38a5e43a842cefc3 226 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 105 118 1.8E-7 T 15-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AM378_17870 ae4fda5ffe329ced38a5e43a842cefc3 226 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 13 191 7.8E-17 T 15-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AM378_05735 66942d3ff199e09a141e9eaa468eeadd 470 Gene3D G3DSA:3.20.20.60 4 332 1.0E-145 T 15-10-2018 AM378_05735 66942d3ff199e09a141e9eaa468eeadd 470 SUPERFAMILY SSF50800 70 167 2.97E-29 T 15-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily AM378_05735 66942d3ff199e09a141e9eaa468eeadd 470 SUPERFAMILY SSF51621 1 338 7.33E-101 T 15-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 AM378_05735 66942d3ff199e09a141e9eaa468eeadd 470 PRINTS PR01050 Pyruvate kinase family signature 186 200 2.0E-77 T 15-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AM378_05735 66942d3ff199e09a141e9eaa468eeadd 470 PRINTS PR01050 Pyruvate kinase family signature 313 329 2.0E-77 T 15-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AM378_05735 66942d3ff199e09a141e9eaa468eeadd 470 PRINTS PR01050 Pyruvate kinase family signature 294 312 2.0E-77 T 15-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AM378_05735 66942d3ff199e09a141e9eaa468eeadd 470 PRINTS PR01050 Pyruvate kinase family signature 244 268 2.0E-77 T 15-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AM378_05735 66942d3ff199e09a141e9eaa468eeadd 470 PRINTS PR01050 Pyruvate kinase family signature 217 243 2.0E-77 T 15-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AM378_05735 66942d3ff199e09a141e9eaa468eeadd 470 PRINTS PR01050 Pyruvate kinase family signature 59 75 2.0E-77 T 15-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AM378_05735 66942d3ff199e09a141e9eaa468eeadd 470 PRINTS PR01050 Pyruvate kinase family signature 269 293 2.0E-77 T 15-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AM378_05735 66942d3ff199e09a141e9eaa468eeadd 470 Gene3D G3DSA:2.40.33.10 71 167 1.0E-145 T 15-10-2018 IPR015806 Pyruvate kinase, insert domain superfamily GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AM378_05735 66942d3ff199e09a141e9eaa468eeadd 470 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 2 469 2.1E-187 T 15-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AM378_05735 66942d3ff199e09a141e9eaa468eeadd 470 SUPERFAMILY SSF52935 323 469 2.35E-35 T 15-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AM378_05735 66942d3ff199e09a141e9eaa468eeadd 470 Pfam PF02887 Pyruvate kinase, alpha/beta domain 356 468 3.3E-28 T 15-10-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AM378_05735 66942d3ff199e09a141e9eaa468eeadd 470 Gene3D G3DSA:3.40.1380.20 336 467 1.5E-45 T 15-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AM378_05735 66942d3ff199e09a141e9eaa468eeadd 470 ProSitePatterns PS00110 Pyruvate kinase active site signature. 215 227 - T 15-10-2018 IPR018209 Pyruvate kinase, active site GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AM378_05735 66942d3ff199e09a141e9eaa468eeadd 470 Pfam PF00224 Pyruvate kinase, barrel domain 1 341 4.4E-152 T 15-10-2018 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AM378_02780 b8eae5312739a7b7a42fb6e5f8a25882 475 TIGRFAM TIGR01479 GMP_PMI: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 8 472 2.3E-232 T 15-10-2018 IPR006375 Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase GO:0000271|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882 AM378_02780 b8eae5312739a7b7a42fb6e5f8a25882 475 Gene3D G3DSA:3.90.550.10 7 356 1.2E-122 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AM378_02780 b8eae5312739a7b7a42fb6e5f8a25882 475 Pfam PF00483 Nucleotidyl transferase 10 292 4.3E-74 T 15-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 AM378_02780 b8eae5312739a7b7a42fb6e5f8a25882 475 SUPERFAMILY SSF53448 8 287 1.67E-76 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AM378_02780 b8eae5312739a7b7a42fb6e5f8a25882 475 Pfam PF01050 Mannose-6-phosphate isomerase 320 470 1.1E-71 T 15-10-2018 IPR001538 Mannose-6-phosphate isomerase, type II, C-terminal GO:0005976|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882 AM378_02780 b8eae5312739a7b7a42fb6e5f8a25882 475 SUPERFAMILY SSF51182 190 470 1.71E-85 T 15-10-2018 IPR011051 RmlC-like cupin domain superfamily AM378_02780 b8eae5312739a7b7a42fb6e5f8a25882 475 Gene3D G3DSA:2.60.120.10 358 471 2.0E-20 T 15-10-2018 IPR014710 RmlC-like jelly roll fold AM378_19900 975208d22aaea2289e69a767e5ef7e09 329 SMART SM00382 42 234 4.6E-12 T 15-10-2018 IPR003593 AAA+ ATPase domain AM378_19900 975208d22aaea2289e69a767e5ef7e09 329 Pfam PF00005 ABC transporter 33 184 3.9E-31 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM378_19900 975208d22aaea2289e69a767e5ef7e09 329 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 235 319 1.5E-25 T 15-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AM378_19900 975208d22aaea2289e69a767e5ef7e09 329 Gene3D G3DSA:3.40.50.300 6 327 6.4E-95 T 15-10-2018 AM378_19900 975208d22aaea2289e69a767e5ef7e09 329 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 236 301 2.0E-18 T 15-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AM378_19900 975208d22aaea2289e69a767e5ef7e09 329 SUPERFAMILY SSF52540 8 256 1.39E-71 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_19900 975208d22aaea2289e69a767e5ef7e09 329 ProSitePatterns PS00211 ABC transporters family signature. 157 171 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM378_06260 1491200048e1ad7b92b1ca363018fa21 428 Gene3D G3DSA:1.10.287.470 102 177 4.7E-10 T 15-10-2018 AM378_06260 1491200048e1ad7b92b1ca363018fa21 428 Pfam PF13437 HlyD family secretion protein 263 392 3.8E-13 T 15-10-2018 AM378_06260 1491200048e1ad7b92b1ca363018fa21 428 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 274 295 1.6E-9 T 15-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AM378_06260 1491200048e1ad7b92b1ca363018fa21 428 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 79 99 1.6E-9 T 15-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AM378_06260 1491200048e1ad7b92b1ca363018fa21 428 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 390 405 1.6E-9 T 15-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AM378_06260 1491200048e1ad7b92b1ca363018fa21 428 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 405 425 1.6E-9 T 15-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AM378_06260 1491200048e1ad7b92b1ca363018fa21 428 ProSitePatterns PS00543 HlyD family secretion proteins signature. 390 412 - T 15-10-2018 IPR006144 Secretion protein HlyD, conserved site GO:0008565|GO:0009306|GO:0016020 AM378_06260 1491200048e1ad7b92b1ca363018fa21 428 Gene3D G3DSA:2.40.30.170 55 67 4.7E-10 T 15-10-2018 AM378_06260 1491200048e1ad7b92b1ca363018fa21 428 Gene3D G3DSA:2.40.30.170 300 401 3.9E-5 T 15-10-2018 AM378_06260 1491200048e1ad7b92b1ca363018fa21 428 Gene3D G3DSA:2.40.50.100 68 101 4.7E-10 T 15-10-2018 AM378_06260 1491200048e1ad7b92b1ca363018fa21 428 Gene3D G3DSA:2.40.50.100 249 292 3.1E-5 T 15-10-2018 AM378_06260 1491200048e1ad7b92b1ca363018fa21 428 Pfam PF13533 Biotin-lipoyl like 68 104 9.7E-6 T 15-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain AM378_20620 e93a15e2131d5232ad572574b6c21f6d 165 SUPERFAMILY SSF160369 4 161 6.93E-49 T 15-10-2018 AM378_20620 e93a15e2131d5232ad572574b6c21f6d 165 Hamap MF_00362 50S ribosomal protein L10 [rplJ]. 3 162 26.782 T 15-10-2018 IPR022973 Ribosomal protein L10 AM378_20620 e93a15e2131d5232ad572574b6c21f6d 165 ProSitePatterns PS01109 Ribosomal protein L10 signature. 8 42 - T 15-10-2018 IPR002363 Ribosomal protein L10, eubacterial, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM378_20620 e93a15e2131d5232ad572574b6c21f6d 165 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 78 155 5.0E-4 T 15-10-2018 AM378_20620 e93a15e2131d5232ad572574b6c21f6d 165 Pfam PF00466 Ribosomal protein L10 5 101 1.4E-26 T 15-10-2018 IPR001790 Ribosomal protein L10P GO:0005622|GO:0042254 AM378_20620 e93a15e2131d5232ad572574b6c21f6d 165 Gene3D G3DSA:3.30.70.1730 1 126 1.4E-35 T 15-10-2018 AM378_09025 1d9a1ed68c110a917f7ffe761c0fb160 490 SUPERFAMILY SSF53720 5 458 2.62E-122 T 15-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 AM378_09025 1d9a1ed68c110a917f7ffe761c0fb160 490 Hamap MF_01174 N-succinylglutamate 5-semialdehyde dehydrogenase [astD]. 4 489 58.036 T 15-10-2018 IPR017649 Succinylglutamate-semialdehyde dehydrogenase GO:0006527|GO:0043824|GO:0055114 KEGG: 00330+1.2.1.71 AM378_09025 1d9a1ed68c110a917f7ffe761c0fb160 490 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 245 252 - T 15-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 AM378_09025 1d9a1ed68c110a917f7ffe761c0fb160 490 Pfam PF00171 Aldehyde dehydrogenase family 12 461 9.4E-116 T 15-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 AM378_09025 1d9a1ed68c110a917f7ffe761c0fb160 490 TIGRFAM TIGR03240 arg_catab_astD: succinylglutamate-semialdehyde dehydrogenase 7 488 1.1E-252 T 15-10-2018 IPR017649 Succinylglutamate-semialdehyde dehydrogenase GO:0006527|GO:0043824|GO:0055114 KEGG: 00330+1.2.1.71 AM378_09025 1d9a1ed68c110a917f7ffe761c0fb160 490 Gene3D G3DSA:3.40.605.10 10 452 2.5E-140 T 15-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 AM378_09025 1d9a1ed68c110a917f7ffe761c0fb160 490 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 273 284 - T 15-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 AM378_09025 1d9a1ed68c110a917f7ffe761c0fb160 490 Gene3D G3DSA:3.40.309.10 250 440 2.5E-140 T 15-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 AM378_19565 c88449f905021b46447c7da1ee506c3c 239 Pfam PF11254 Protein of unknown function (DUF3053) 17 235 2.8E-98 T 15-10-2018 IPR021413 Protein of unknown function DUF3053 AM378_20910 eadc9bcc5cbd9d7274b538f81fc9f34f 548 Pfam PF00118 TCP-1/cpn60 chaperonin family 23 523 5.5E-93 T 15-10-2018 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 AM378_20910 eadc9bcc5cbd9d7274b538f81fc9f34f 548 SUPERFAMILY SSF54849 137 203 9.39E-25 T 15-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily AM378_20910 eadc9bcc5cbd9d7274b538f81fc9f34f 548 Gene3D G3DSA:3.30.260.10 136 410 5.6E-239 T 15-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily AM378_20910 eadc9bcc5cbd9d7274b538f81fc9f34f 548 TIGRFAM TIGR02348 GroEL: chaperonin GroL 3 526 4.1E-255 T 15-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 AM378_20910 eadc9bcc5cbd9d7274b538f81fc9f34f 548 Hamap MF_00600 60 kDa chaperonin [groL]. 2 547 41.494 T 15-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 AM378_20910 eadc9bcc5cbd9d7274b538f81fc9f34f 548 Gene3D G3DSA:3.50.7.10 192 372 5.6E-239 T 15-10-2018 IPR027409 GroEL-like apical domain superfamily AM378_20910 eadc9bcc5cbd9d7274b538f81fc9f34f 548 Gene3D G3DSA:1.10.560.10 8 521 5.6E-239 T 15-10-2018 IPR027413 GroEL-like equatorial domain superfamily AM378_20910 eadc9bcc5cbd9d7274b538f81fc9f34f 548 SUPERFAMILY SSF52029 185 376 4.19E-82 T 15-10-2018 IPR027409 GroEL-like apical domain superfamily AM378_20910 eadc9bcc5cbd9d7274b538f81fc9f34f 548 PRINTS PR00298 60kDa chaperonin signature 83 110 2.5E-74 T 15-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 AM378_20910 eadc9bcc5cbd9d7274b538f81fc9f34f 548 PRINTS PR00298 60kDa chaperonin signature 350 375 2.5E-74 T 15-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 AM378_20910 eadc9bcc5cbd9d7274b538f81fc9f34f 548 PRINTS PR00298 60kDa chaperonin signature 27 53 2.5E-74 T 15-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 AM378_20910 eadc9bcc5cbd9d7274b538f81fc9f34f 548 PRINTS PR00298 60kDa chaperonin signature 398 419 2.5E-74 T 15-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 AM378_20910 eadc9bcc5cbd9d7274b538f81fc9f34f 548 PRINTS PR00298 60kDa chaperonin signature 268 291 2.5E-74 T 15-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 AM378_20910 eadc9bcc5cbd9d7274b538f81fc9f34f 548 ProSitePatterns PS00296 Chaperonins cpn60 signature. 405 416 - T 15-10-2018 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 AM378_20910 eadc9bcc5cbd9d7274b538f81fc9f34f 548 SUPERFAMILY SSF48592 7 521 9.16E-77 T 15-10-2018 IPR027413 GroEL-like equatorial domain superfamily AM378_18420 441eb6486f346dfd6aa8c3db33474110 283 SUPERFAMILY SSF52172 159 282 2.13E-12 T 15-10-2018 IPR011006 CheY-like superfamily AM378_18420 441eb6486f346dfd6aa8c3db33474110 283 Pfam PF00072 Response regulator receiver domain 162 249 1.4E-4 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM378_18420 441eb6486f346dfd6aa8c3db33474110 283 Gene3D G3DSA:3.40.50.2300 155 283 1.4E-11 T 15-10-2018 AM378_18420 441eb6486f346dfd6aa8c3db33474110 283 Pfam PF08667 BetR domain 12 152 8.7E-33 T 15-10-2018 IPR013975 Transcription regulator BetR, N-terminal AM378_02675 534c687293d7b9ac89494177571f4f9c 370 Hamap MF_02040 Iron-sulfur cluster carrier protein. 102 351 37.127 T 15-10-2018 IPR019591 Mrp/NBP35 ATP-binding protein AM378_02675 534c687293d7b9ac89494177571f4f9c 370 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 107 350 1.1E-98 T 15-10-2018 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 AM378_02675 534c687293d7b9ac89494177571f4f9c 370 SUPERFAMILY SSF52540 109 356 5.21E-56 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_02675 534c687293d7b9ac89494177571f4f9c 370 ProSitePatterns PS01215 Mrp family signature. 214 230 - T 15-10-2018 IPR000808 Mrp, conserved site GO:0005524 AM378_02675 534c687293d7b9ac89494177571f4f9c 370 Gene3D G3DSA:3.40.50.300 94 349 1.9E-79 T 15-10-2018 AM378_03370 5071773ef0eee7c87b9971f2bde6bbfa 73 SUPERFAMILY SSF50249 1 66 5.78E-23 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold AM378_03370 5071773ef0eee7c87b9971f2bde6bbfa 73 Pfam PF00313 'Cold-shock' DNA-binding domain 3 65 3.4E-28 T 15-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AM378_03370 5071773ef0eee7c87b9971f2bde6bbfa 73 PRINTS PR00050 Cold shock protein signature 4 19 3.6E-16 T 15-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AM378_03370 5071773ef0eee7c87b9971f2bde6bbfa 73 PRINTS PR00050 Cold shock protein signature 40 58 3.6E-16 T 15-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AM378_03370 5071773ef0eee7c87b9971f2bde6bbfa 73 PRINTS PR00050 Cold shock protein signature 25 34 3.6E-16 T 15-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AM378_03370 5071773ef0eee7c87b9971f2bde6bbfa 73 Gene3D G3DSA:2.40.50.140 2 65 1.4E-26 T 15-10-2018 AM378_03370 5071773ef0eee7c87b9971f2bde6bbfa 73 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 34 - T 15-10-2018 IPR019844 Cold-shock conserved site AM378_03370 5071773ef0eee7c87b9971f2bde6bbfa 73 TIGRFAM TIGR02381 cspD: cold shock domain protein CspD 1 68 7.7E-42 T 15-10-2018 IPR012751 CspD, cold shock GO:0003676|GO:0005737|GO:0006355 AM378_03370 5071773ef0eee7c87b9971f2bde6bbfa 73 PIRSF PIRSF002599 1 73 1.1E-22 T 15-10-2018 IPR012156 Cold shock, CspA GO:0003676 AM378_03370 5071773ef0eee7c87b9971f2bde6bbfa 73 SMART SM00357 3 67 5.3E-28 T 15-10-2018 IPR011129 Cold shock domain GO:0003676 AM378_04305 8e88559b98370b2f98e195b68da0051c 49 Pfam PF10848 Protein of unknown function (DUF2655) 14 47 1.1E-11 T 15-10-2018 IPR020371 Uncharacterised protein family YceQ AM378_04305 8e88559b98370b2f98e195b68da0051c 49 ProDom PD078424 YCEQ 15 47 2.0E-6 T 15-10-2018 IPR020371 Uncharacterised protein family YceQ AM378_11545 67dc8c772e2406c5a941ed67c67dd580 583 Gene3D G3DSA:3.40.190.10 104 226 3.5E-17 T 15-10-2018 AM378_11545 67dc8c772e2406c5a941ed67c67dd580 583 SMART SM00388 349 418 6.0E-5 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM378_11545 67dc8c772e2406c5a941ed67c67dd580 583 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 469 569 8.8E-13 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AM378_11545 67dc8c772e2406c5a941ed67c67dd580 583 Gene3D G3DSA:3.30.565.10 426 579 2.7E-21 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AM378_11545 67dc8c772e2406c5a941ed67c67dd580 583 PRINTS PR00344 Bacterial sensor protein C-terminal signature 517 527 9.5E-6 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM378_11545 67dc8c772e2406c5a941ed67c67dd580 583 PRINTS PR00344 Bacterial sensor protein C-terminal signature 499 513 9.5E-6 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM378_11545 67dc8c772e2406c5a941ed67c67dd580 583 PRINTS PR00344 Bacterial sensor protein C-terminal signature 528 546 9.5E-6 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM378_11545 67dc8c772e2406c5a941ed67c67dd580 583 SUPERFAMILY SSF47384 341 414 1.75E-8 T 15-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AM378_11545 67dc8c772e2406c5a941ed67c67dd580 583 SUPERFAMILY SSF55874 423 567 8.12E-24 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AM378_11545 67dc8c772e2406c5a941ed67c67dd580 583 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 21 273 1.3E-34 T 15-10-2018 AM378_11545 67dc8c772e2406c5a941ed67c67dd580 583 Gene3D G3DSA:3.40.190.10 22 251 3.5E-17 T 15-10-2018 AM378_11545 67dc8c772e2406c5a941ed67c67dd580 583 SUPERFAMILY SSF53850 58 249 1.67E-13 T 15-10-2018 AM378_11545 67dc8c772e2406c5a941ed67c67dd580 583 Gene3D G3DSA:1.10.287.130 354 414 3.6E-15 T 15-10-2018 AM378_11545 67dc8c772e2406c5a941ed67c67dd580 583 SMART SM00387 464 572 4.7E-17 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AM378_11930 42ba15b6211e6200de0bddb0db6d7f00 260 Gene3D G3DSA:3.40.190.10 113 213 1.4E-85 T 15-10-2018 AM378_11930 42ba15b6211e6200de0bddb0db6d7f00 260 SUPERFAMILY SSF53850 8 257 5.68E-67 T 15-10-2018 AM378_11930 42ba15b6211e6200de0bddb0db6d7f00 260 SMART SM00062 27 256 6.8E-78 T 15-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AM378_11930 42ba15b6211e6200de0bddb0db6d7f00 260 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 28 254 1.0E-62 T 15-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AM378_11930 42ba15b6211e6200de0bddb0db6d7f00 260 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 50 63 - T 15-10-2018 IPR018313 Solute-binding protein family 3, conserved site AM378_11930 42ba15b6211e6200de0bddb0db6d7f00 260 Gene3D G3DSA:3.40.190.10 29 252 1.4E-85 T 15-10-2018 AM378_11930 42ba15b6211e6200de0bddb0db6d7f00 260 TIGRFAM TIGR01096 3A0103s03R: lysine-arginine-ornithine-binding periplasmic protein 7 253 1.7E-93 T 15-10-2018 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter GO:0030288|GO:0071705 AM378_11970 ee887a0f2c5f52699e71e1b1844680dc 273 Gene3D G3DSA:3.30.70.660 116 253 7.0E-50 T 15-10-2018 IPR020095 Pseudouridine synthase I, TruA, C-terminal GO:0003723|GO:0009982 AM378_11970 ee887a0f2c5f52699e71e1b1844680dc 273 Gene3D G3DSA:3.30.70.580 9 115 1.4E-40 T 15-10-2018 AM378_11970 ee887a0f2c5f52699e71e1b1844680dc 273 Pfam PF01416 tRNA pseudouridine synthase 19 113 3.4E-8 T 15-10-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM378_11970 ee887a0f2c5f52699e71e1b1844680dc 273 Pfam PF01416 tRNA pseudouridine synthase 153 255 1.4E-27 T 15-10-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM378_11970 ee887a0f2c5f52699e71e1b1844680dc 273 SUPERFAMILY SSF55120 11 267 1.09E-91 T 15-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM378_11970 ee887a0f2c5f52699e71e1b1844680dc 273 TIGRFAM TIGR00071 hisT_truA: tRNA pseudouridine(38-40) synthase 13 249 8.9E-77 T 15-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM378_11970 ee887a0f2c5f52699e71e1b1844680dc 273 Hamap MF_00171 tRNA pseudouridine synthase A [truA]. 12 254 35.201 T 15-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM378_11970 ee887a0f2c5f52699e71e1b1844680dc 273 PIRSF PIRSF001430 11 262 9.8E-77 T 15-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM378_13365 170ace544eb5355d1fffc9aaa3a52d65 66 TIGRFAM TIGR03412 iscX_yfhJ: FeS assembly protein IscX 4 66 4.8E-33 T 15-10-2018 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 AM378_13365 170ace544eb5355d1fffc9aaa3a52d65 66 Gene3D G3DSA:1.10.10.600 1 66 1.4E-32 T 15-10-2018 IPR036762 IscX-like superfamily AM378_13365 170ace544eb5355d1fffc9aaa3a52d65 66 Pfam PF04384 Iron-sulphur cluster assembly 3 66 1.3E-32 T 15-10-2018 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 AM378_13365 170ace544eb5355d1fffc9aaa3a52d65 66 PIRSF PIRSF039003 3 66 2.9E-33 T 15-10-2018 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 AM378_13365 170ace544eb5355d1fffc9aaa3a52d65 66 SUPERFAMILY SSF140319 3 64 5.62E-27 T 15-10-2018 IPR036762 IscX-like superfamily AM378_22055 58f2bb2f0bbab4c6ab48253d65186317 268 SUPERFAMILY SSF53474 7 265 9.57E-45 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold AM378_22055 58f2bb2f0bbab4c6ab48253d65186317 268 Gene3D G3DSA:3.40.50.1820 2 267 1.4E-58 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold AM378_22055 58f2bb2f0bbab4c6ab48253d65186317 268 Pfam PF12146 Serine aminopeptidase, S33 25 251 7.2E-57 T 15-10-2018 IPR022742 Serine aminopeptidase, S33 AM378_22055 58f2bb2f0bbab4c6ab48253d65186317 268 PRINTS PR00111 Alpha/beta hydrolase fold signature 103 116 6.2E-9 T 15-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AM378_22055 58f2bb2f0bbab4c6ab48253d65186317 268 PRINTS PR00111 Alpha/beta hydrolase fold signature 206 220 6.2E-9 T 15-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AM378_22055 58f2bb2f0bbab4c6ab48253d65186317 268 PRINTS PR00111 Alpha/beta hydrolase fold signature 54 69 6.2E-9 T 15-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AM378_21645 ce17096615b0cc52467d7ac4d930d498 535 ProSitePatterns PS00623 GMC oxidoreductases signature 1. 81 104 - T 15-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 AM378_21645 ce17096615b0cc52467d7ac4d930d498 535 SUPERFAMILY SSF51905 2 533 2.02E-88 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AM378_21645 ce17096615b0cc52467d7ac4d930d498 535 Gene3D G3DSA:3.50.50.60 6 529 2.0E-170 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AM378_21645 ce17096615b0cc52467d7ac4d930d498 535 Gene3D G3DSA:1.10.1220.110 96 150 2.0E-170 T 15-10-2018 AM378_21645 ce17096615b0cc52467d7ac4d930d498 535 Pfam PF05199 GMC oxidoreductase 388 526 1.5E-36 T 15-10-2018 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 Reactome: R-HSA-6798163 AM378_21645 ce17096615b0cc52467d7ac4d930d498 535 ProSitePatterns PS00624 GMC oxidoreductases signature 2. 255 269 - T 15-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 AM378_21645 ce17096615b0cc52467d7ac4d930d498 535 Pfam PF00732 GMC oxidoreductase 6 295 2.5E-86 T 15-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 AM378_21645 ce17096615b0cc52467d7ac4d930d498 535 Gene3D G3DSA:3.30.410.40 151 472 2.0E-170 T 15-10-2018 AM378_21645 ce17096615b0cc52467d7ac4d930d498 535 SUPERFAMILY SSF54373 290 475 5.49E-40 T 15-10-2018 AM378_21645 ce17096615b0cc52467d7ac4d930d498 535 Gene3D G3DSA:4.10.450.10 39 196 2.0E-170 T 15-10-2018 IPR027424 Glucose Oxidase, domain 2 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494|Reactome: R-HSA-6798163 AM378_21645 ce17096615b0cc52467d7ac4d930d498 535 PIRSF PIRSF000137 1 535 4.3E-146 T 15-10-2018 IPR012132 Glucose-methanol-choline oxidoreductase GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 AM378_24370 ffd9c9b4ed3b25e64a4f93074a6c8be2 784 ProSitePatterns PS01046 ATP-dependent serine proteases, lon family, serine active site. 676 684 - T 15-10-2018 IPR008268 Peptidase S16, active site GO:0004176|GO:0004252|GO:0006508 AM378_24370 ffd9c9b4ed3b25e64a4f93074a6c8be2 784 Hamap MF_01973 Lon protease [lon]. 11 772 72.064 T 15-10-2018 IPR027543 Lon protease, bacterial GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0043565 AM378_24370 ffd9c9b4ed3b25e64a4f93074a6c8be2 784 PIRSF PIRSF001174 1 775 0.0 T 15-10-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 AM378_24370 ffd9c9b4ed3b25e64a4f93074a6c8be2 784 SMART SM00464 10 202 9.0E-85 T 15-10-2018 IPR003111 Lon, substrate-binding domain AM378_24370 ffd9c9b4ed3b25e64a4f93074a6c8be2 784 Gene3D G3DSA:2.30.130.40 1 118 4.2E-38 T 15-10-2018 AM378_24370 ffd9c9b4ed3b25e64a4f93074a6c8be2 784 SUPERFAMILY SSF88697 10 201 7.7E-52 T 15-10-2018 IPR015947 PUA-like superfamily AM378_24370 ffd9c9b4ed3b25e64a4f93074a6c8be2 784 SUPERFAMILY SSF54211 595 771 1.4E-59 T 15-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AM378_24370 ffd9c9b4ed3b25e64a4f93074a6c8be2 784 TIGRFAM TIGR00763 lon: endopeptidase La 12 771 0.0 T 15-10-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 AM378_24370 ffd9c9b4ed3b25e64a4f93074a6c8be2 784 Gene3D G3DSA:3.40.50.300 313 490 2.7E-61 T 15-10-2018 AM378_24370 ffd9c9b4ed3b25e64a4f93074a6c8be2 784 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 352 489 1.7E-17 T 15-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AM378_24370 ffd9c9b4ed3b25e64a4f93074a6c8be2 784 SUPERFAMILY SSF52540 314 586 6.5E-50 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_24370 ffd9c9b4ed3b25e64a4f93074a6c8be2 784 Gene3D G3DSA:1.20.58.1480 120 245 2.0E-47 T 15-10-2018 AM378_24370 ffd9c9b4ed3b25e64a4f93074a6c8be2 784 Gene3D G3DSA:1.10.8.60 491 584 2.4E-32 T 15-10-2018 AM378_24370 ffd9c9b4ed3b25e64a4f93074a6c8be2 784 SMART SM00382 348 492 9.4E-11 T 15-10-2018 IPR003593 AAA+ ATPase domain AM378_24370 ffd9c9b4ed3b25e64a4f93074a6c8be2 784 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 10 201 1.2E-43 T 15-10-2018 IPR003111 Lon, substrate-binding domain AM378_24370 ffd9c9b4ed3b25e64a4f93074a6c8be2 784 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 356 375 6.0E-57 T 15-10-2018 AM378_24370 ffd9c9b4ed3b25e64a4f93074a6c8be2 784 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 595 611 6.0E-57 T 15-10-2018 AM378_24370 ffd9c9b4ed3b25e64a4f93074a6c8be2 784 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 726 744 6.0E-57 T 15-10-2018 AM378_24370 ffd9c9b4ed3b25e64a4f93074a6c8be2 784 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 673 692 6.0E-57 T 15-10-2018 AM378_24370 ffd9c9b4ed3b25e64a4f93074a6c8be2 784 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 703 722 6.0E-57 T 15-10-2018 AM378_24370 ffd9c9b4ed3b25e64a4f93074a6c8be2 784 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 570 772 3.3E-97 T 15-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 AM378_24370 ffd9c9b4ed3b25e64a4f93074a6c8be2 784 Gene3D G3DSA:3.30.230.10 585 772 7.7E-88 T 15-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AM378_00920 37462170f5299d67e06792670fbb7682 898 Pfam PF13493 Domain of unknown function (DUF4118) 405 509 1.7E-30 T 15-10-2018 IPR025201 Sensor protein KdpD, transmembrane domain AM378_00920 37462170f5299d67e06792670fbb7682 898 SUPERFAMILY SSF52402 253 363 1.59E-8 T 15-10-2018 AM378_00920 37462170f5299d67e06792670fbb7682 898 SUPERFAMILY SSF55874 722 889 2.36E-42 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AM378_00920 37462170f5299d67e06792670fbb7682 898 PRINTS PR00344 Bacterial sensor protein C-terminal signature 814 828 3.6E-12 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM378_00920 37462170f5299d67e06792670fbb7682 898 PRINTS PR00344 Bacterial sensor protein C-terminal signature 832 842 3.6E-12 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM378_00920 37462170f5299d67e06792670fbb7682 898 PRINTS PR00344 Bacterial sensor protein C-terminal signature 871 884 3.6E-12 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM378_00920 37462170f5299d67e06792670fbb7682 898 PRINTS PR00344 Bacterial sensor protein C-terminal signature 847 865 3.6E-12 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM378_00920 37462170f5299d67e06792670fbb7682 898 Gene3D G3DSA:3.40.50.620 236 366 4.1E-7 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM378_00920 37462170f5299d67e06792670fbb7682 898 Pfam PF13492 GAF domain 532 647 1.0E-11 T 15-10-2018 IPR003018 GAF domain GO:0005515 AM378_00920 37462170f5299d67e06792670fbb7682 898 SMART SM00387 777 887 1.5E-34 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AM378_00920 37462170f5299d67e06792670fbb7682 898 Gene3D G3DSA:1.10.287.130 657 735 4.3E-14 T 15-10-2018 AM378_00920 37462170f5299d67e06792670fbb7682 898 Pfam PF02702 Osmosensitive K+ channel His kinase sensor domain 23 231 3.2E-99 T 15-10-2018 IPR003852 Signal transduction histidine kinase, osmosensitive K+ channel sensor, N-terminal GO:0000155|GO:0000160|GO:0004673|GO:0016020 AM378_00920 37462170f5299d67e06792670fbb7682 898 Gene3D G3DSA:3.30.450.40 513 656 1.4E-35 T 15-10-2018 IPR029016 GAF-like domain superfamily AM378_00920 37462170f5299d67e06792670fbb7682 898 SMART SM00388 666 733 2.1E-13 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM378_00920 37462170f5299d67e06792670fbb7682 898 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 779 887 2.1E-23 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AM378_00920 37462170f5299d67e06792670fbb7682 898 Gene3D G3DSA:3.30.565.10 741 890 3.0E-36 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AM378_00920 37462170f5299d67e06792670fbb7682 898 SUPERFAMILY SSF55781 511 659 8.34E-6 T 15-10-2018 AM378_00920 37462170f5299d67e06792670fbb7682 898 SUPERFAMILY SSF47384 662 734 4.9E-14 T 15-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AM378_00920 37462170f5299d67e06792670fbb7682 898 Gene3D G3DSA:3.40.50.300 20 230 1.7E-102 T 15-10-2018 AM378_00920 37462170f5299d67e06792670fbb7682 898 Gene3D G3DSA:1.20.120.620 398 504 8.4E-40 T 15-10-2018 IPR038318 KdpD, transmembrane domain superfamily AM378_00920 37462170f5299d67e06792670fbb7682 898 Pfam PF00512 His Kinase A (phospho-acceptor) domain 667 733 7.7E-11 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM378_05250 1e57e31f8f06d3845367a9a27a7f950c 434 Pfam PF07690 Major Facilitator Superfamily 253 428 1.0E-11 T 15-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM378_05250 1e57e31f8f06d3845367a9a27a7f950c 434 Gene3D G3DSA:1.20.1250.20 12 433 8.4E-66 T 15-10-2018 AM378_05250 1e57e31f8f06d3845367a9a27a7f950c 434 ProSitePatterns PS00216 Sugar transport proteins signature 1. 296 312 - T 15-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AM378_05250 1e57e31f8f06d3845367a9a27a7f950c 434 ProSitePatterns PS00217 Sugar transport proteins signature 2. 126 151 - T 15-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AM378_05250 1e57e31f8f06d3845367a9a27a7f950c 434 SUPERFAMILY SSF103473 9 432 1.57E-66 T 15-10-2018 IPR036259 MFS transporter superfamily AM378_05250 1e57e31f8f06d3845367a9a27a7f950c 434 Pfam PF00083 Sugar (and other) transporter 19 228 1.3E-29 T 15-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 AM378_06125 7feebf988d91391b2d6cf23a4ff14aed 465 Gene3D G3DSA:1.20.200.10 139 407 3.2E-121 T 15-10-2018 AM378_06125 7feebf988d91391b2d6cf23a4ff14aed 465 Gene3D G3DSA:1.10.40.30 408 465 2.7E-31 T 15-10-2018 AM378_06125 7feebf988d91391b2d6cf23a4ff14aed 465 Hamap MF_00743 Fumarate hydratase class II [fumC]. 4 462 91.989 T 15-10-2018 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 AM378_06125 7feebf988d91391b2d6cf23a4ff14aed 465 PRINTS PR00149 Fumarate lyase superfamily signature 134 152 9.8E-34 T 15-10-2018 IPR000362 Fumarate lyase family AM378_06125 7feebf988d91391b2d6cf23a4ff14aed 465 PRINTS PR00149 Fumarate lyase superfamily signature 317 333 9.8E-34 T 15-10-2018 IPR000362 Fumarate lyase family AM378_06125 7feebf988d91391b2d6cf23a4ff14aed 465 PRINTS PR00149 Fumarate lyase superfamily signature 180 198 9.8E-34 T 15-10-2018 IPR000362 Fumarate lyase family AM378_06125 7feebf988d91391b2d6cf23a4ff14aed 465 PRINTS PR00149 Fumarate lyase superfamily signature 271 298 9.8E-34 T 15-10-2018 IPR000362 Fumarate lyase family AM378_06125 7feebf988d91391b2d6cf23a4ff14aed 465 Pfam PF00206 Lyase 12 342 1.3E-121 T 15-10-2018 IPR022761 Fumarate lyase, N-terminal AM378_06125 7feebf988d91391b2d6cf23a4ff14aed 465 PRINTS PR00145 Argininosuccinate lyase family signature 175 195 1.1E-5 T 15-10-2018 AM378_06125 7feebf988d91391b2d6cf23a4ff14aed 465 PRINTS PR00145 Argininosuccinate lyase family signature 317 333 1.1E-5 T 15-10-2018 AM378_06125 7feebf988d91391b2d6cf23a4ff14aed 465 TIGRFAM TIGR00979 fumC_II: fumarate hydratase, class II 4 461 3.3E-245 T 15-10-2018 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 AM378_06125 7feebf988d91391b2d6cf23a4ff14aed 465 SUPERFAMILY SSF48557 4 459 3.46E-161 T 15-10-2018 IPR008948 L-Aspartase-like GO:0003824 AM378_06125 7feebf988d91391b2d6cf23a4ff14aed 465 Gene3D G3DSA:1.10.275.10 5 138 4.2E-56 T 15-10-2018 IPR024083 Fumarase/histidase, N-terminal AM378_06125 7feebf988d91391b2d6cf23a4ff14aed 465 ProSitePatterns PS00163 Fumarate lyases signature. 317 326 - T 15-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 AM378_06125 7feebf988d91391b2d6cf23a4ff14aed 465 Pfam PF10415 Fumarase C C-terminus 408 461 3.5E-26 T 15-10-2018 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 AM378_07770 a3c668ea6c43cd5e888f27f04e4cd1f8 186 Gene3D G3DSA:2.160.10.10 1 182 1.6E-45 T 15-10-2018 AM378_07770 a3c668ea6c43cd5e888f27f04e4cd1f8 186 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 18 44 0.003 T 15-10-2018 IPR001451 Hexapeptide repeat AM378_07770 a3c668ea6c43cd5e888f27f04e4cd1f8 186 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 79 111 1.8E-4 T 15-10-2018 IPR001451 Hexapeptide repeat AM378_07770 a3c668ea6c43cd5e888f27f04e4cd1f8 186 SUPERFAMILY SSF51161 8 137 1.94E-30 T 15-10-2018 IPR011004 Trimeric LpxA-like superfamily AM378_20555 f6a59dfca35ba3a18df99c67f5f4e487 320 TIGRFAM TIGR00122 birA_repr_reg: biotin operon repressor 6 73 3.3E-26 T 15-10-2018 IPR004409 Biotin operon repressor, helix-turn-helix domain GO:0006355 KEGG: 00780+6.3.4.15 AM378_20555 f6a59dfca35ba3a18df99c67f5f4e487 320 Gene3D G3DSA:1.10.10.10 1 63 2.1E-20 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_20555 f6a59dfca35ba3a18df99c67f5f4e487 320 SUPERFAMILY SSF50037 271 317 1.83E-11 T 15-10-2018 IPR008988 Transcriptional repressor, C-terminal AM378_20555 f6a59dfca35ba3a18df99c67f5f4e487 320 Pfam PF03099 Biotin/lipoate A/B protein ligase family 84 208 1.4E-25 T 15-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 AM378_20555 f6a59dfca35ba3a18df99c67f5f4e487 320 TIGRFAM TIGR00121 birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase 81 317 1.7E-78 T 15-10-2018 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 AM378_20555 f6a59dfca35ba3a18df99c67f5f4e487 320 Hamap MF_00978 Bifunctional ligase/repressor BirA [birA]. 7 317 33.648 T 15-10-2018 IPR030855 Bifunctional ligase/repressor BirA GO:0004077|GO:0006355 KEGG: 00780+6.3.4.15 AM378_20555 f6a59dfca35ba3a18df99c67f5f4e487 320 Pfam PF02237 Biotin protein ligase C terminal domain 272 317 2.2E-12 T 15-10-2018 IPR003142 Biotin protein ligase, C-terminal GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 AM378_20555 f6a59dfca35ba3a18df99c67f5f4e487 320 SUPERFAMILY SSF46785 3 60 8.17E-12 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM378_20555 f6a59dfca35ba3a18df99c67f5f4e487 320 Gene3D G3DSA:3.30.930.10 65 270 2.2E-75 T 15-10-2018 AM378_20555 f6a59dfca35ba3a18df99c67f5f4e487 320 Pfam PF08279 HTH domain 9 58 3.8E-11 T 15-10-2018 IPR013196 Helix-turn-helix, type 11 AM378_20555 f6a59dfca35ba3a18df99c67f5f4e487 320 Gene3D G3DSA:2.30.30.100 271 313 6.9E-23 T 15-10-2018 AM378_20555 f6a59dfca35ba3a18df99c67f5f4e487 320 SUPERFAMILY SSF55681 72 268 3.91E-60 T 15-10-2018 AM378_16955 7e07f0c24dfa3941aefa6d18754f932c 5950 Gene3D G3DSA:3.30.559.10 28 224 1.4E-40 T 15-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 AM378_16955 7e07f0c24dfa3941aefa6d18754f932c 5950 SUPERFAMILY SSF56801 3985 4540 7.33E-161 T 15-10-2018 AM378_16955 7e07f0c24dfa3941aefa6d18754f932c 5950 Gene3D G3DSA:3.40.50.12780 4014 4408 1.6E-143 T 15-10-2018 AM378_16955 7e07f0c24dfa3941aefa6d18754f932c 5950 Gene3D G3DSA:3.40.50.12780 5083 5476 9.5E-140 T 15-10-2018 AM378_16955 7e07f0c24dfa3941aefa6d18754f932c 5950 Gene3D G3DSA:3.40.50.12780 833 1236 1.8E-142 T 15-10-2018 AM378_16955 7e07f0c24dfa3941aefa6d18754f932c 5950 SUPERFAMILY SSF47336 1348 1420 2.36E-17 T 15-10-2018 IPR036736 ACP-like superfamily AM378_16955 7e07f0c24dfa3941aefa6d18754f932c 5950 SUPERFAMILY SSF52777 2701 2960 5.34E-43 T 15-10-2018 AM378_16955 7e07f0c24dfa3941aefa6d18754f932c 5950 ProSitePatterns PS00012 Phosphopantetheine attachment site. 5619 5634 - T 15-10-2018 IPR006162 Phosphopantetheine attachment site AM378_16955 7e07f0c24dfa3941aefa6d18754f932c 5950 ProSitePatterns PS00012 Phosphopantetheine attachment site. 1380 1395 - T 15-10-2018 IPR006162 Phosphopantetheine attachment site AM378_16955 7e07f0c24dfa3941aefa6d18754f932c 5950 Pfam PF00550 Phosphopantetheine attachment site 2409 2469 7.5E-11 T 15-10-2018 IPR009081 Phosphopantetheine binding ACP domain AM378_16955 7e07f0c24dfa3941aefa6d18754f932c 5950 Pfam PF00550 Phosphopantetheine attachment site 4530 4590 2.4E-10 T 15-10-2018 IPR009081 Phosphopantetheine binding ACP domain AM378_16955 7e07f0c24dfa3941aefa6d18754f932c 5950 Pfam PF00550 Phosphopantetheine attachment site 5598 5659 1.1E-11 T 15-10-2018 IPR009081 Phosphopantetheine binding ACP domain AM378_16955 7e07f0c24dfa3941aefa6d18754f932c 5950 Pfam PF00550 Phosphopantetheine attachment site 1358 1419 2.3E-9 T 15-10-2018 IPR009081 Phosphopantetheine binding ACP domain AM378_16955 7e07f0c24dfa3941aefa6d18754f932c 5950 Pfam PF00550 Phosphopantetheine attachment site 3483 3543 6.6E-12 T 15-10-2018 IPR009081 Phosphopantetheine binding ACP domain AM378_16955 7e07f0c24dfa3941aefa6d18754f932c 5950 SUPERFAMILY SSF56801 804 1369 3.01E-161 T 15-10-2018 AM378_16955 7e07f0c24dfa3941aefa6d18754f932c 5950 SMART SM00823 Phosphopantetheine attachment site 1356 1424 0.075 T 15-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 AM378_16955 7e07f0c24dfa3941aefa6d18754f932c 5950 SMART SM00823 Phosphopantetheine attachment site 2406 2474 0.041 T 15-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 AM378_16955 7e07f0c24dfa3941aefa6d18754f932c 5950 SMART SM00823 Phosphopantetheine attachment site 4527 4595 0.0059 T 15-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 AM378_16955 7e07f0c24dfa3941aefa6d18754f932c 5950 SMART SM00823 Phosphopantetheine attachment site 5595 5663 1.6E-6 T 15-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 AM378_16955 7e07f0c24dfa3941aefa6d18754f932c 5950 SMART SM00823 Phosphopantetheine attachment site 3480 3548 0.0046 T 15-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 AM378_16955 7e07f0c24dfa3941aefa6d18754f932c 5950 SUPERFAMILY SSF56801 5053 5608 7.46E-159 T 15-10-2018 AM378_16955 7e07f0c24dfa3941aefa6d18754f932c 5950 Pfam PF00668 Condensation domain 2519 2953 2.2E-42 T 15-10-2018 IPR001242 Condensation domain AM378_16955 7e07f0c24dfa3941aefa6d18754f932c 5950 Pfam PF00668 Condensation domain 4640 5071 5.3E-46 T 15-10-2018 IPR001242 Condensation domain AM378_16955 7e07f0c24dfa3941aefa6d18754f932c 5950 Pfam PF00668 Condensation domain 3563 4005 1.6E-105 T 15-10-2018 IPR001242 Condensation domain AM378_16955 7e07f0c24dfa3941aefa6d18754f932c 5950 Pfam PF00668 Condensation domain 1438 1879 7.0E-101 T 15-10-2018 IPR001242 Condensation domain AM378_16955 7e07f0c24dfa3941aefa6d18754f932c 5950 Pfam PF00668 Condensation domain 28 362 2.3E-39 T 15-10-2018 IPR001242 Condensation domain AM378_16955 7e07f0c24dfa3941aefa6d18754f932c 5950 SUPERFAMILY SSF50486 469 571 1.14E-8 T 15-10-2018 IPR011034 Formyl transferase-like, C-terminal domain superfamily GO:0003824 AM378_16955 7e07f0c24dfa3941aefa6d18754f932c 5950 SUPERFAMILY SSF56801 1861 2419 9.68E-177 T 15-10-2018 AM378_16955 7e07f0c24dfa3941aefa6d18754f932c 5950 ProSitePatterns PS00455 Putative AMP-binding domain signature. 5228 5239 - T 15-10-2018 IPR020845 AMP-binding, conserved site AM378_16955 7e07f0c24dfa3941aefa6d18754f932c 5950 SUPERFAMILY SSF47336 2398 2469 1.57E-18 T 15-10-2018 IPR036736 ACP-like superfamily AM378_16955 7e07f0c24dfa3941aefa6d18754f932c 5950 Gene3D G3DSA:3.10.25.10 467 572 1.0E-5 T 15-10-2018 IPR037022 Formyl transferase, C-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AM378_16955 7e07f0c24dfa3941aefa6d18754f932c 5950 SUPERFAMILY SSF52777 2518 2713 2.33E-29 T 15-10-2018 AM378_16955 7e07f0c24dfa3941aefa6d18754f932c 5950 SUPERFAMILY SSF52777 590 827 1.33E-10 T 15-10-2018 AM378_16955 7e07f0c24dfa3941aefa6d18754f932c 5950 Gene3D G3DSA:1.10.1200.10 3469 3550 6.8E-26 T 15-10-2018 IPR036736 ACP-like superfamily AM378_16955 7e07f0c24dfa3941aefa6d18754f932c 5950 Gene3D G3DSA:1.10.1200.10 1345 1425 2.7E-23 T 15-10-2018 IPR036736 ACP-like superfamily AM378_16955 7e07f0c24dfa3941aefa6d18754f932c 5950 SMART SM00824 Thioesterase 5684 5856 4.8E-5 T 15-10-2018 IPR020802 Polyketide synthase, thioesterase domain GO:0009058|GO:0016788 AM378_16955 7e07f0c24dfa3941aefa6d18754f932c 5950 Gene3D G3DSA:3.30.559.30 232 445 2.2E-31 T 15-10-2018 AM378_16955 7e07f0c24dfa3941aefa6d18754f932c 5950 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 864 1268 1.2E-133 T 15-10-2018 IPR010071 Amino acid adenylation domain AM378_16955 7e07f0c24dfa3941aefa6d18754f932c 5950 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 1920 2320 9.0E-145 T 15-10-2018 IPR010071 Amino acid adenylation domain AM378_16955 7e07f0c24dfa3941aefa6d18754f932c 5950 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 2994 3394 4.8E-144 T 15-10-2018 IPR010071 Amino acid adenylation domain AM378_16955 7e07f0c24dfa3941aefa6d18754f932c 5950 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 4046 4440 3.6E-134 T 15-10-2018 IPR010071 Amino acid adenylation domain AM378_16955 7e07f0c24dfa3941aefa6d18754f932c 5950 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 5115 5508 2.4E-127 T 15-10-2018 IPR010071 Amino acid adenylation domain AM378_16955 7e07f0c24dfa3941aefa6d18754f932c 5950 SUPERFAMILY SSF52777 3746 4011 5.45E-59 T 15-10-2018 AM378_16955 7e07f0c24dfa3941aefa6d18754f932c 5950 Gene3D G3DSA:3.40.50.1820 2397 2523 9.1E-25 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold AM378_16955 7e07f0c24dfa3941aefa6d18754f932c 5950 Gene3D G3DSA:3.40.50.1820 4517 4642 1.8E-24 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold AM378_16955 7e07f0c24dfa3941aefa6d18754f932c 5950 Gene3D G3DSA:3.30.559.30 3744 3988 1.4E-148 T 15-10-2018 AM378_16955 7e07f0c24dfa3941aefa6d18754f932c 5950 Pfam PF00975 Thioesterase domain 5682 5929 2.1E-24 T 15-10-2018 IPR001031 Thioesterase GO:0009058|GO:0016788 Reactome: R-HSA-75105 AM378_16955 7e07f0c24dfa3941aefa6d18754f932c 5950 Pfam PF13193 AMP-binding enzyme C-terminal domain 4424 4500 1.7E-12 T 15-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain AM378_16955 7e07f0c24dfa3941aefa6d18754f932c 5950 Pfam PF13193 AMP-binding enzyme C-terminal domain 5492 5568 3.5E-10 T 15-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain AM378_16955 7e07f0c24dfa3941aefa6d18754f932c 5950 Pfam PF13193 AMP-binding enzyme C-terminal domain 2304 2380 6.0E-13 T 15-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain AM378_16955 7e07f0c24dfa3941aefa6d18754f932c 5950 Pfam PF13193 AMP-binding enzyme C-terminal domain 3378 3454 3.3E-14 T 15-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain AM378_16955 7e07f0c24dfa3941aefa6d18754f932c 5950 Pfam PF13193 AMP-binding enzyme C-terminal domain 1252 1329 6.9E-13 T 15-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain AM378_16955 7e07f0c24dfa3941aefa6d18754f932c 5950 SUPERFAMILY SSF47336 3472 3545 2.62E-19 T 15-10-2018 IPR036736 ACP-like superfamily AM378_16955 7e07f0c24dfa3941aefa6d18754f932c 5950 Gene3D G3DSA:3.30.559.10 1441 1805 7.9E-147 T 15-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 AM378_16955 7e07f0c24dfa3941aefa6d18754f932c 5950 Pfam PF00501 AMP-binding enzyme 1899 2296 4.7E-110 T 15-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 AM378_16955 7e07f0c24dfa3941aefa6d18754f932c 5950 Pfam PF00501 AMP-binding enzyme 843 1244 1.9E-95 T 15-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 AM378_16955 7e07f0c24dfa3941aefa6d18754f932c 5950 Pfam PF00501 AMP-binding enzyme 5094 5484 1.1E-96 T 15-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 AM378_16955 7e07f0c24dfa3941aefa6d18754f932c 5950 Pfam PF00501 AMP-binding enzyme 4025 4416 3.6E-100 T 15-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 AM378_16955 7e07f0c24dfa3941aefa6d18754f932c 5950 Pfam PF00501 AMP-binding enzyme 2973 3370 2.8E-108 T 15-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 AM378_16955 7e07f0c24dfa3941aefa6d18754f932c 5950 SUPERFAMILY SSF52777 4639 4834 6.45E-31 T 15-10-2018 AM378_16955 7e07f0c24dfa3941aefa6d18754f932c 5950 ProSitePatterns PS00455 Putative AMP-binding domain signature. 2039 2050 - T 15-10-2018 IPR020845 AMP-binding, conserved site AM378_16955 7e07f0c24dfa3941aefa6d18754f932c 5950 SUPERFAMILY SSF52777 207 437 1.45E-23 T 15-10-2018 AM378_16955 7e07f0c24dfa3941aefa6d18754f932c 5950 Gene3D G3DSA:3.30.300.30 2291 2396 8.2E-36 T 15-10-2018 AM378_16955 7e07f0c24dfa3941aefa6d18754f932c 5950 Gene3D G3DSA:3.30.300.30 3365 3468 7.1E-37 T 15-10-2018 AM378_16955 7e07f0c24dfa3941aefa6d18754f932c 5950 Gene3D G3DSA:3.30.300.30 5478 5583 2.4E-34 T 15-10-2018 AM378_16955 7e07f0c24dfa3941aefa6d18754f932c 5950 Gene3D G3DSA:3.30.300.30 4410 4516 3.2E-34 T 15-10-2018 AM378_16955 7e07f0c24dfa3941aefa6d18754f932c 5950 Gene3D G3DSA:3.30.300.30 1238 1344 9.3E-35 T 15-10-2018 AM378_16955 7e07f0c24dfa3941aefa6d18754f932c 5950 Gene3D G3DSA:3.40.50.1820 5671 5948 2.1E-47 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold AM378_16955 7e07f0c24dfa3941aefa6d18754f932c 5950 SUPERFAMILY SSF52777 3565 3740 4.56E-53 T 15-10-2018 AM378_16955 7e07f0c24dfa3941aefa6d18754f932c 5950 ProSitePatterns PS00455 Putative AMP-binding domain signature. 3113 3124 - T 15-10-2018 IPR020845 AMP-binding, conserved site AM378_16955 7e07f0c24dfa3941aefa6d18754f932c 5950 SUPERFAMILY SSF52777 1620 1886 1.33E-56 T 15-10-2018 AM378_16955 7e07f0c24dfa3941aefa6d18754f932c 5950 Gene3D G3DSA:3.30.559.10 2525 2883 2.2E-79 T 15-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 AM378_16955 7e07f0c24dfa3941aefa6d18754f932c 5950 SUPERFAMILY SSF47336 4519 4591 1.57E-18 T 15-10-2018 IPR036736 ACP-like superfamily AM378_16955 7e07f0c24dfa3941aefa6d18754f932c 5950 Gene3D G3DSA:3.30.559.30 590 829 3.1E-14 T 15-10-2018 AM378_16955 7e07f0c24dfa3941aefa6d18754f932c 5950 Gene3D G3DSA:3.40.50.12780 2959 3364 2.0E-153 T 15-10-2018 AM378_16955 7e07f0c24dfa3941aefa6d18754f932c 5950 Gene3D G3DSA:3.40.50.12780 1885 2290 1.7E-154 T 15-10-2018 AM378_16955 7e07f0c24dfa3941aefa6d18754f932c 5950 Gene3D G3DSA:3.30.559.30 1618 1859 7.9E-147 T 15-10-2018 AM378_16955 7e07f0c24dfa3941aefa6d18754f932c 5950 Gene3D G3DSA:3.30.559.30 4820 5069 2.0E-84 T 15-10-2018 AM378_16955 7e07f0c24dfa3941aefa6d18754f932c 5950 Gene3D G3DSA:3.30.559.30 2699 2949 2.2E-79 T 15-10-2018 AM378_16955 7e07f0c24dfa3941aefa6d18754f932c 5950 Gene3D G3DSA:1.10.1200.10 5584 5665 6.0E-26 T 15-10-2018 IPR036736 ACP-like superfamily AM378_16955 7e07f0c24dfa3941aefa6d18754f932c 5950 SUPERFAMILY SSF56801 2932 3493 1.1E-175 T 15-10-2018 AM378_16955 7e07f0c24dfa3941aefa6d18754f932c 5950 SUPERFAMILY SSF47336 5587 5660 6.81E-20 T 15-10-2018 IPR036736 ACP-like superfamily AM378_16955 7e07f0c24dfa3941aefa6d18754f932c 5950 ProSitePatterns PS00012 Phosphopantetheine attachment site. 3504 3519 - T 15-10-2018 IPR006162 Phosphopantetheine attachment site AM378_16955 7e07f0c24dfa3941aefa6d18754f932c 5950 Gene3D G3DSA:3.30.559.10 3564 3931 1.4E-148 T 15-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 AM378_16955 7e07f0c24dfa3941aefa6d18754f932c 5950 SUPERFAMILY SSF53474 5662 5930 1.59E-45 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold AM378_16955 7e07f0c24dfa3941aefa6d18754f932c 5950 ProSitePatterns PS00455 Putative AMP-binding domain signature. 4162 4173 - T 15-10-2018 IPR020845 AMP-binding, conserved site AM378_16955 7e07f0c24dfa3941aefa6d18754f932c 5950 SUPERFAMILY SSF52777 4822 5057 5.34E-44 T 15-10-2018 AM378_16955 7e07f0c24dfa3941aefa6d18754f932c 5950 SUPERFAMILY SSF52777 1442 1614 3.56E-50 T 15-10-2018 AM378_16955 7e07f0c24dfa3941aefa6d18754f932c 5950 ProSitePatterns PS00455 Putative AMP-binding domain signature. 982 993 - T 15-10-2018 IPR020845 AMP-binding, conserved site AM378_16955 7e07f0c24dfa3941aefa6d18754f932c 5950 SUPERFAMILY SSF52777 28 187 6.11E-28 T 15-10-2018 AM378_16955 7e07f0c24dfa3941aefa6d18754f932c 5950 Gene3D G3DSA:3.30.559.10 4646 5004 2.0E-84 T 15-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 AM378_21825 a87d4f3de6a5aae3963c3e29a9756575 320 Gene3D G3DSA:3.30.1220.10 206 319 5.6E-31 T 15-10-2018 IPR036627 CobW-like, C-terminal domain superfamily AM378_21825 a87d4f3de6a5aae3963c3e29a9756575 320 Gene3D G3DSA:3.40.50.300 1 202 1.7E-68 T 15-10-2018 AM378_21825 a87d4f3de6a5aae3963c3e29a9756575 320 SMART SM00833 226 320 1.7E-11 T 15-10-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal AM378_21825 a87d4f3de6a5aae3963c3e29a9756575 320 SUPERFAMILY SSF52540 2 202 1.55E-42 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_21825 a87d4f3de6a5aae3963c3e29a9756575 320 Pfam PF07683 Cobalamin synthesis protein cobW C-terminal domain 226 314 6.9E-17 T 15-10-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal AM378_21825 a87d4f3de6a5aae3963c3e29a9756575 320 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 6 183 3.3E-48 T 15-10-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain AM378_21825 a87d4f3de6a5aae3963c3e29a9756575 320 SUPERFAMILY SSF90002 226 316 1.96E-23 T 15-10-2018 AM378_00955 897f195bc6d9a07c9fe3e4b0034fc573 476 Pfam PF00875 DNA photolyase 5 174 1.5E-41 T 15-10-2018 IPR006050 DNA photolyase, N-terminal Reactome: R-HSA-400253 AM378_00955 897f195bc6d9a07c9fe3e4b0034fc573 476 Gene3D G3DSA:3.40.50.620 5 204 2.9E-75 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM378_00955 897f195bc6d9a07c9fe3e4b0034fc573 476 SUPERFAMILY SSF48173 202 472 3.4E-108 T 15-10-2018 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily Reactome: R-HSA-400253 AM378_00955 897f195bc6d9a07c9fe3e4b0034fc573 476 Gene3D G3DSA:1.10.579.10 293 475 1.1E-84 T 15-10-2018 AM378_00955 897f195bc6d9a07c9fe3e4b0034fc573 476 ProSitePatterns PS00394 DNA photolyases class 1 signature 1. 325 337 - T 15-10-2018 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal AM378_00955 897f195bc6d9a07c9fe3e4b0034fc573 476 Gene3D G3DSA:1.25.40.80 133 289 2.9E-75 T 15-10-2018 AM378_00955 897f195bc6d9a07c9fe3e4b0034fc573 476 PRINTS PR00147 DNA photolyase signature 384 398 1.2E-30 T 15-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 AM378_00955 897f195bc6d9a07c9fe3e4b0034fc573 476 PRINTS PR00147 DNA photolyase signature 325 341 1.2E-30 T 15-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 AM378_00955 897f195bc6d9a07c9fe3e4b0034fc573 476 PRINTS PR00147 DNA photolyase signature 144 160 1.2E-30 T 15-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 AM378_00955 897f195bc6d9a07c9fe3e4b0034fc573 476 PRINTS PR00147 DNA photolyase signature 345 363 1.2E-30 T 15-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 AM378_00955 897f195bc6d9a07c9fe3e4b0034fc573 476 ProSitePatterns PS00691 DNA photolyases class 1 signature 2. 345 364 - T 15-10-2018 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal AM378_00955 897f195bc6d9a07c9fe3e4b0034fc573 476 SUPERFAMILY SSF52425 3 186 1.57E-51 T 15-10-2018 IPR036155 Cryptochrome/photolyase, N-terminal domain superfamily Reactome: R-HSA-400253 AM378_00955 897f195bc6d9a07c9fe3e4b0034fc573 476 Pfam PF03441 FAD binding domain of DNA photolyase 275 469 1.6E-82 T 15-10-2018 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain Reactome: R-HSA-400253 AM378_02460 59605eb89058aa4466a7eedbf52b13f9 152 Gene3D G3DSA:1.10.10.60 56 117 4.1E-20 T 15-10-2018 AM378_02460 59605eb89058aa4466a7eedbf52b13f9 152 SUPERFAMILY SSF46689 5 55 1.08E-9 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AM378_02460 59605eb89058aa4466a7eedbf52b13f9 152 SMART SM00342 21 104 9.6E-32 T 15-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM378_02460 59605eb89058aa4466a7eedbf52b13f9 152 Gene3D G3DSA:1.10.10.60 3 55 7.2E-27 T 15-10-2018 AM378_02460 59605eb89058aa4466a7eedbf52b13f9 152 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 73 88 2.2E-6 T 15-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM378_02460 59605eb89058aa4466a7eedbf52b13f9 152 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 88 104 2.2E-6 T 15-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM378_02460 59605eb89058aa4466a7eedbf52b13f9 152 SUPERFAMILY SSF46689 57 111 2.51E-14 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AM378_02460 59605eb89058aa4466a7eedbf52b13f9 152 Pfam PF12833 Helix-turn-helix domain 27 105 2.9E-22 T 15-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM378_01995 3fff1f85a0f51fe4f55ef65e48aa8340 181 SUPERFAMILY SSF54909 2 95 1.44E-19 T 15-10-2018 IPR011008 Dimeric alpha-beta barrel AM378_01995 3fff1f85a0f51fe4f55ef65e48aa8340 181 Pfam PF03992 Antibiotic biosynthesis monooxygenase 7 81 7.6E-6 T 15-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain AM378_16465 33c6fa0cb07b15be341960cfe61f1dd8 233 PIRSF PIRSF006232 1 230 8.2E-29 T 15-10-2018 IPR012093 Pirin Reactome: R-HSA-8935690 AM378_16465 33c6fa0cb07b15be341960cfe61f1dd8 233 SUPERFAMILY SSF51182 1 231 1.98E-43 T 15-10-2018 IPR011051 RmlC-like cupin domain superfamily AM378_16465 33c6fa0cb07b15be341960cfe61f1dd8 233 Gene3D G3DSA:2.60.120.10 12 133 3.2E-36 T 15-10-2018 IPR014710 RmlC-like jelly roll fold AM378_16465 33c6fa0cb07b15be341960cfe61f1dd8 233 Gene3D G3DSA:2.60.120.10 134 233 2.2E-36 T 15-10-2018 IPR014710 RmlC-like jelly roll fold AM378_16465 33c6fa0cb07b15be341960cfe61f1dd8 233 Pfam PF02678 Pirin 5 119 1.3E-19 T 15-10-2018 IPR003829 Pirin, N-terminal domain Reactome: R-HSA-8935690 AM378_11095 1a456c4999626d7083a9533572c50459 241 Gene3D G3DSA:3.40.50.300 15 237 1.1E-21 T 15-10-2018 AM378_11095 1a456c4999626d7083a9533572c50459 241 SUPERFAMILY SSF52540 14 187 2.2E-11 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_03400 8384795230567e34ece742cef2914dd0 588 Gene3D G3DSA:1.20.1560.10 1 335 1.6E-50 T 15-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 AM378_03400 8384795230567e34ece742cef2914dd0 588 Pfam PF00664 ABC transporter transmembrane region 26 291 3.3E-42 T 15-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 AM378_03400 8384795230567e34ece742cef2914dd0 588 ProSitePatterns PS00211 ABC transporters family signature. 486 500 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM378_03400 8384795230567e34ece742cef2914dd0 588 SMART SM00382 375 560 2.0E-13 T 15-10-2018 IPR003593 AAA+ ATPase domain AM378_03400 8384795230567e34ece742cef2914dd0 588 TIGRFAM TIGR02857 CydD: thiol reductant ABC exporter, CydD subunit 21 556 3.3E-196 T 15-10-2018 IPR014216 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD GO:0005524|GO:0016020|GO:0042883 AM378_03400 8384795230567e34ece742cef2914dd0 588 SUPERFAMILY SSF52540 362 582 2.93E-63 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_03400 8384795230567e34ece742cef2914dd0 588 Pfam PF00005 ABC transporter 369 513 1.7E-26 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM378_03400 8384795230567e34ece742cef2914dd0 588 Gene3D G3DSA:3.40.50.300 349 587 1.2E-69 T 15-10-2018 AM378_03400 8384795230567e34ece742cef2914dd0 588 SUPERFAMILY SSF90123 11 331 2.22E-54 T 15-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 AM378_22195 77adc12dfd9d2a845c63114197bc9f85 425 ProSitePatterns PS00909 Mandelate racemase / muconate lactonizing enzyme family signature 2. 244 275 - T 15-10-2018 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 AM378_22195 77adc12dfd9d2a845c63114197bc9f85 425 SUPERFAMILY SSF51604 183 424 4.59E-70 T 15-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily AM378_22195 77adc12dfd9d2a845c63114197bc9f85 425 Gene3D G3DSA:3.20.20.120 131 425 8.5E-113 T 15-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily AM378_22195 77adc12dfd9d2a845c63114197bc9f85 425 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 34 135 2.4E-5 T 15-10-2018 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain AM378_22195 77adc12dfd9d2a845c63114197bc9f85 425 SUPERFAMILY SSF54826 3 138 3.54E-38 T 15-10-2018 AM378_22195 77adc12dfd9d2a845c63114197bc9f85 425 SMART SM00922 198 294 1.5E-24 T 15-10-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal AM378_22195 77adc12dfd9d2a845c63114197bc9f85 425 Pfam PF13378 Enolase C-terminal domain-like 201 414 9.1E-58 T 15-10-2018 IPR029065 Enolase C-terminal domain-like AM378_22195 77adc12dfd9d2a845c63114197bc9f85 425 Gene3D G3DSA:3.30.390.10 1 130 1.5E-57 T 15-10-2018 IPR029017 Enolase-like, N-terminal AM378_14080 a42631ed4a53d47a7270071f0a0de975 139 TIGRFAM TIGR01068 thioredoxin: thioredoxin 45 137 2.6E-36 T 15-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 AM378_14080 a42631ed4a53d47a7270071f0a0de975 139 Gene3D G3DSA:3.40.30.10 35 139 1.1E-34 T 15-10-2018 AM378_14080 a42631ed4a53d47a7270071f0a0de975 139 Gene3D G3DSA:2.20.28.140 1 34 2.9E-19 T 15-10-2018 AM378_14080 a42631ed4a53d47a7270071f0a0de975 139 ProSitePatterns PS00194 Thioredoxin family active site. 56 74 - T 15-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 AM378_14080 a42631ed4a53d47a7270071f0a0de975 139 Pfam PF00085 Thioredoxin 37 137 3.1E-27 T 15-10-2018 IPR013766 Thioredoxin domain GO:0045454 AM378_14080 a42631ed4a53d47a7270071f0a0de975 139 PIRSF PIRSF000077 35 139 3.8E-33 T 15-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 AM378_14080 a42631ed4a53d47a7270071f0a0de975 139 PRINTS PR00421 Thioredoxin family signature 103 114 1.3E-8 T 15-10-2018 AM378_14080 a42631ed4a53d47a7270071f0a0de975 139 PRINTS PR00421 Thioredoxin family signature 55 63 1.3E-8 T 15-10-2018 AM378_14080 a42631ed4a53d47a7270071f0a0de975 139 PRINTS PR00421 Thioredoxin family signature 63 72 1.3E-8 T 15-10-2018 AM378_14080 a42631ed4a53d47a7270071f0a0de975 139 SUPERFAMILY SSF52833 24 138 6.37E-39 T 15-10-2018 IPR036249 Thioredoxin-like superfamily AM378_05555 96f16bcd7d0912be0c94a525b5b8dbcd 251 Hamap MF_01005 Vitamin B12 import ATP-binding protein BtuD [btuD]. 1 249 44.851 T 15-10-2018 IPR023693 ABC transporter, vitamin B12, BtuD GO:0005524|GO:0015889|GO:0016887 AM378_05555 96f16bcd7d0912be0c94a525b5b8dbcd 251 SMART SM00382 22 227 2.8E-6 T 15-10-2018 IPR003593 AAA+ ATPase domain AM378_05555 96f16bcd7d0912be0c94a525b5b8dbcd 251 SUPERFAMILY SSF52540 15 227 2.61E-45 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_05555 96f16bcd7d0912be0c94a525b5b8dbcd 251 ProSitePatterns PS00211 ABC transporters family signature. 128 142 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM378_05555 96f16bcd7d0912be0c94a525b5b8dbcd 251 Pfam PF00005 ABC transporter 16 163 2.1E-18 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM378_05555 96f16bcd7d0912be0c94a525b5b8dbcd 251 Gene3D G3DSA:3.40.50.300 10 249 9.8E-56 T 15-10-2018 AM378_00255 3b279f5c31ecb07f2b83038d7b0f6d22 652 Pfam PF12169 DNA polymerase III subunits gamma and tau domain III 232 361 6.7E-33 T 15-10-2018 IPR022754 DNA polymerase III, gamma subunit, domain III GO:0003887 AM378_00255 3b279f5c31ecb07f2b83038d7b0f6d22 652 SUPERFAMILY SSF48019 243 366 4.59E-36 T 15-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 AM378_00255 3b279f5c31ecb07f2b83038d7b0f6d22 652 Gene3D G3DSA:3.30.300.150 506 634 9.8E-48 T 15-10-2018 IPR038249 DNA polymerase III, tau subunit, C-terminal domain superfamily KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM378_00255 3b279f5c31ecb07f2b83038d7b0f6d22 652 Gene3D G3DSA:3.40.50.300 13 177 3.6E-105 T 15-10-2018 AM378_00255 3b279f5c31ecb07f2b83038d7b0f6d22 652 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 41 59 2.8E-5 T 15-10-2018 IPR001270 ClpA/B family GO:0005524 AM378_00255 3b279f5c31ecb07f2b83038d7b0f6d22 652 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 124 142 2.8E-5 T 15-10-2018 IPR001270 ClpA/B family GO:0005524 AM378_00255 3b279f5c31ecb07f2b83038d7b0f6d22 652 Pfam PF12170 DNA polymerase III tau subunit V interacting with alpha 508 649 1.8E-61 T 15-10-2018 IPR021029 DNA polymerase III, tau subunit, domain V GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM378_00255 3b279f5c31ecb07f2b83038d7b0f6d22 652 Pfam PF13177 DNA polymerase III, delta subunit 20 178 1.7E-42 T 15-10-2018 AM378_00255 3b279f5c31ecb07f2b83038d7b0f6d22 652 TIGRFAM TIGR02397 dnaX_nterm: DNA polymerase III, subunit gamma and tau 3 356 4.7E-136 T 15-10-2018 IPR012763 DNA polymerase III, subunit gamma/ tau GO:0003887|GO:0005524|GO:0006260|GO:0009360 AM378_00255 3b279f5c31ecb07f2b83038d7b0f6d22 652 SMART SM00382 37 178 9.9E-9 T 15-10-2018 IPR003593 AAA+ ATPase domain AM378_00255 3b279f5c31ecb07f2b83038d7b0f6d22 652 Gene3D G3DSA:1.10.8.60 8 240 3.6E-105 T 15-10-2018 AM378_00255 3b279f5c31ecb07f2b83038d7b0f6d22 652 Gene3D G3DSA:1.20.272.10 242 363 2.1E-44 T 15-10-2018 AM378_00255 3b279f5c31ecb07f2b83038d7b0f6d22 652 Pfam PF12168 DNA polymerase III subunits tau domain IV DnaB-binding 426 506 3.0E-21 T 15-10-2018 IPR022001 DNA polymerase III subunit tau, DnaB-binding domain IV KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM378_00255 3b279f5c31ecb07f2b83038d7b0f6d22 652 SUPERFAMILY SSF52540 35 222 3.07E-57 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_07680 023b2e67c56650a69f7fca08a7d70270 327 Gene3D G3DSA:3.30.460.20 1 139 4.8E-45 T 15-10-2018 AM378_07680 023b2e67c56650a69f7fca08a7d70270 327 Gene3D G3DSA:1.20.58.340 270 327 7.4E-11 T 15-10-2018 AM378_07680 023b2e67c56650a69f7fca08a7d70270 327 SUPERFAMILY SSF143865 11 258 1.83E-52 T 15-10-2018 AM378_07680 023b2e67c56650a69f7fca08a7d70270 327 Hamap MF_01565 Zinc transport protein ZntB [zntB]. 1 327 69.516 T 15-10-2018 IPR023714 Zinc transport protein ZntB GO:0005385|GO:0005886|GO:0071577 AM378_07680 023b2e67c56650a69f7fca08a7d70270 327 Pfam PF01544 CorA-like Mg2+ transporter protein 41 323 2.4E-64 T 15-10-2018 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 AM378_07680 023b2e67c56650a69f7fca08a7d70270 327 SUPERFAMILY SSF144083 263 324 2.48E-13 T 15-10-2018 AM378_07680 023b2e67c56650a69f7fca08a7d70270 327 Gene3D G3DSA:1.20.58.340 140 262 3.3E-41 T 15-10-2018 AM378_10930 eceb918d29e3e31426dcae121c5dd691 467 SUPERFAMILY SSF53720 3 443 2.49E-113 T 15-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 AM378_10930 eceb918d29e3e31426dcae121c5dd691 467 PIRSF PIRSF036492 1 467 8.3E-149 T 15-10-2018 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent GO:0006081|GO:0055114 AM378_10930 eceb918d29e3e31426dcae121c5dd691 467 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 209 216 - T 15-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 AM378_10930 eceb918d29e3e31426dcae121c5dd691 467 Gene3D G3DSA:3.40.309.10 213 416 6.2E-145 T 15-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 AM378_10930 eceb918d29e3e31426dcae121c5dd691 467 Gene3D G3DSA:3.40.605.10 11 436 6.2E-145 T 15-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 AM378_10930 eceb918d29e3e31426dcae121c5dd691 467 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 237 248 - T 15-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 AM378_10930 eceb918d29e3e31426dcae121c5dd691 467 Pfam PF00171 Aldehyde dehydrogenase family 10 434 1.5E-87 T 15-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 AM378_20495 0e89c91311955c5e1c16265cfd8cc072 233 SUPERFAMILY SSF63380 3 97 3.94E-22 T 15-10-2018 IPR017938 Riboflavin synthase-like beta-barrel AM378_20495 0e89c91311955c5e1c16265cfd8cc072 233 Pfam PF00970 Oxidoreductase FAD-binding domain 6 95 3.4E-5 T 15-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 AM378_20495 0e89c91311955c5e1c16265cfd8cc072 233 Gene3D G3DSA:2.40.30.10 2 98 1.5E-25 T 15-10-2018 AM378_20495 0e89c91311955c5e1c16265cfd8cc072 233 Pfam PF00175 Oxidoreductase NAD-binding domain 108 211 2.5E-21 T 15-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 AM378_20495 0e89c91311955c5e1c16265cfd8cc072 233 Gene3D G3DSA:3.40.50.80 99 233 1.8E-28 T 15-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AM378_20495 0e89c91311955c5e1c16265cfd8cc072 233 SUPERFAMILY SSF52343 100 231 1.31E-34 T 15-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AM378_20495 0e89c91311955c5e1c16265cfd8cc072 233 PRINTS PR00410 Phenol hydroxylase reductase family signature 31 43 2.4E-13 T 15-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AM378_20495 0e89c91311955c5e1c16265cfd8cc072 233 PRINTS PR00410 Phenol hydroxylase reductase family signature 47 54 2.4E-13 T 15-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AM378_20495 0e89c91311955c5e1c16265cfd8cc072 233 PRINTS PR00410 Phenol hydroxylase reductase family signature 91 100 2.4E-13 T 15-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AM378_20495 0e89c91311955c5e1c16265cfd8cc072 233 PRINTS PR00410 Phenol hydroxylase reductase family signature 132 141 2.4E-13 T 15-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AM378_20495 0e89c91311955c5e1c16265cfd8cc072 233 PRINTS PR00410 Phenol hydroxylase reductase family signature 107 126 2.4E-13 T 15-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AM378_04330 c3710adeed058484d485025f37de5a99 344 Gene3D G3DSA:3.40.718.10 3 343 2.2E-118 T 15-10-2018 AM378_04330 c3710adeed058484d485025f37de5a99 344 PIRSF PIRSF002465 2 344 3.0E-119 T 15-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 AM378_04330 c3710adeed058484d485025f37de5a99 344 SUPERFAMILY SSF53659 4 340 2.01E-98 T 15-10-2018 AM378_04330 c3710adeed058484d485025f37de5a99 344 TIGRFAM TIGR00182 plsX: fatty acid/phospholipid synthesis protein PlsX 6 342 1.2E-128 T 15-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 AM378_04330 c3710adeed058484d485025f37de5a99 344 Pfam PF02504 Fatty acid synthesis protein 5 331 1.2E-113 T 15-10-2018 IPR003664 Fatty acid synthesis PlsX protein GO:0003824|GO:0006633|GO:0016747 AM378_04330 c3710adeed058484d485025f37de5a99 344 Hamap MF_00019 Phosphate acyltransferase [plsX]. 1 344 138.392 T 15-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 AM378_20895 06f5c59071caeb98fc16a513bfa3e311 478 SUPERFAMILY SSF48557 2 458 4.27E-144 T 15-10-2018 IPR008948 L-Aspartase-like GO:0003824 AM378_20895 06f5c59071caeb98fc16a513bfa3e311 478 PRINTS PR00145 Argininosuccinate lyase family signature 320 336 1.2E-5 T 15-10-2018 AM378_20895 06f5c59071caeb98fc16a513bfa3e311 478 PRINTS PR00145 Argininosuccinate lyase family signature 137 159 1.2E-5 T 15-10-2018 AM378_20895 06f5c59071caeb98fc16a513bfa3e311 478 PRINTS PR00145 Argininosuccinate lyase family signature 178 198 1.2E-5 T 15-10-2018 AM378_20895 06f5c59071caeb98fc16a513bfa3e311 478 Gene3D G3DSA:1.10.275.10 6 142 2.9E-59 T 15-10-2018 IPR024083 Fumarase/histidase, N-terminal AM378_20895 06f5c59071caeb98fc16a513bfa3e311 478 ProSitePatterns PS00163 Fumarate lyases signature. 320 329 - T 15-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 AM378_20895 06f5c59071caeb98fc16a513bfa3e311 478 Gene3D G3DSA:1.10.40.30 411 460 4.7E-30 T 15-10-2018 AM378_20895 06f5c59071caeb98fc16a513bfa3e311 478 Pfam PF00206 Lyase 13 345 2.1E-109 T 15-10-2018 IPR022761 Fumarate lyase, N-terminal AM378_20895 06f5c59071caeb98fc16a513bfa3e311 478 Pfam PF10415 Fumarase C C-terminus 411 464 1.6E-17 T 15-10-2018 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 AM378_20895 06f5c59071caeb98fc16a513bfa3e311 478 Gene3D G3DSA:1.20.200.10 143 410 2.6E-115 T 15-10-2018 AM378_20895 06f5c59071caeb98fc16a513bfa3e311 478 TIGRFAM TIGR00839 aspA: aspartate ammonia-lyase 6 474 1.1E-266 T 15-10-2018 IPR004708 Aspartate ammonia-lyase GO:0006531|GO:0008797 KEGG: 00250+4.3.1.1 AM378_20895 06f5c59071caeb98fc16a513bfa3e311 478 PRINTS PR00149 Fumarate lyase superfamily signature 320 336 1.7E-27 T 15-10-2018 IPR000362 Fumarate lyase family AM378_20895 06f5c59071caeb98fc16a513bfa3e311 478 PRINTS PR00149 Fumarate lyase superfamily signature 138 156 1.7E-27 T 15-10-2018 IPR000362 Fumarate lyase family AM378_20895 06f5c59071caeb98fc16a513bfa3e311 478 PRINTS PR00149 Fumarate lyase superfamily signature 183 201 1.7E-27 T 15-10-2018 IPR000362 Fumarate lyase family AM378_20895 06f5c59071caeb98fc16a513bfa3e311 478 PRINTS PR00149 Fumarate lyase superfamily signature 274 301 1.7E-27 T 15-10-2018 IPR000362 Fumarate lyase family AM378_15905 37d67502992de68406fc7f96e486111e 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 15 74 2.9E-23 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_15905 37d67502992de68406fc7f96e486111e 303 Gene3D G3DSA:3.40.190.10 176 279 5.7E-49 T 15-10-2018 AM378_15905 37d67502992de68406fc7f96e486111e 303 SUPERFAMILY SSF46785 14 98 9.47E-26 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM378_15905 37d67502992de68406fc7f96e486111e 303 Gene3D G3DSA:3.40.190.10 103 298 5.7E-49 T 15-10-2018 AM378_15905 37d67502992de68406fc7f96e486111e 303 Gene3D G3DSA:1.10.10.10 13 102 5.8E-29 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_15905 37d67502992de68406fc7f96e486111e 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 41 7.8E-11 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_15905 37d67502992de68406fc7f96e486111e 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 51 62 7.8E-11 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_15905 37d67502992de68406fc7f96e486111e 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 51 7.8E-11 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_15905 37d67502992de68406fc7f96e486111e 303 Pfam PF03466 LysR substrate binding domain 99 302 1.5E-39 T 15-10-2018 IPR005119 LysR, substrate-binding AM378_15905 37d67502992de68406fc7f96e486111e 303 SUPERFAMILY SSF53850 100 302 4.75E-35 T 15-10-2018 AM378_06045 6b48858838b525cea82d0923f99c5a59 334 Gene3D G3DSA:1.20.1530.20 7 327 5.6E-33 T 15-10-2018 IPR038770 Sodium/solute symporter superfamily AM378_06045 6b48858838b525cea82d0923f99c5a59 334 PIRSF PIRSF026166 1 334 1.8E-133 T 15-10-2018 IPR016833 Putative sodium bile acid cotransporter AM378_06045 6b48858838b525cea82d0923f99c5a59 334 Pfam PF13593 SBF-like CPA transporter family (DUF4137) 10 319 1.1E-103 T 15-10-2018 IPR016833 Putative sodium bile acid cotransporter AM378_20470 d2b7a48a19c9afbe67ffa58a00a73801 260 Hamap MF_00901 3'-5' ssDNA/RNA exonuclease TatD [tatD]. 1 260 64.253 T 15-10-2018 IPR024918 3'-5' ssDNA/RNA exonuclease TatD GO:0008408 AM378_20470 d2b7a48a19c9afbe67ffa58a00a73801 260 PIRSF PIRSF005902 1 260 5.1E-75 T 15-10-2018 IPR001130 TatD family GO:0016788 AM378_20470 d2b7a48a19c9afbe67ffa58a00a73801 260 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 190 206 - T 15-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 AM378_20470 d2b7a48a19c9afbe67ffa58a00a73801 260 Gene3D G3DSA:3.20.20.140 1 260 1.1E-97 T 15-10-2018 AM378_20470 d2b7a48a19c9afbe67ffa58a00a73801 260 SUPERFAMILY SSF51556 1 259 2.77E-82 T 15-10-2018 IPR032466 Metal-dependent hydrolase AM378_20470 d2b7a48a19c9afbe67ffa58a00a73801 260 Pfam PF01026 TatD related DNase 2 257 5.8E-68 T 15-10-2018 IPR001130 TatD family GO:0016788 AM378_02005 16dcdf4bd043ddb46dff513f574513bd 303 Gene3D G3DSA:1.10.10.10 2 90 2.6E-17 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_02005 16dcdf4bd043ddb46dff513f574513bd 303 Gene3D G3DSA:3.40.190.290 94 276 4.7E-12 T 15-10-2018 AM378_02005 16dcdf4bd043ddb46dff513f574513bd 303 SUPERFAMILY SSF46785 3 89 1.42E-16 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM378_02005 16dcdf4bd043ddb46dff513f574513bd 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 1.3E-15 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_02005 16dcdf4bd043ddb46dff513f574513bd 303 Pfam PF03466 LysR substrate binding domain 90 292 9.0E-24 T 15-10-2018 IPR005119 LysR, substrate-binding AM378_02005 16dcdf4bd043ddb46dff513f574513bd 303 SUPERFAMILY SSF53850 90 295 4.89E-27 T 15-10-2018 AM378_05290 7a1e53cfe4cce834da999d171287e5fc 311 SUPERFAMILY SSF49401 198 311 8.45E-5 T 15-10-2018 IPR008966 Adhesion domain superfamily AM378_05290 7a1e53cfe4cce834da999d171287e5fc 311 SMART SM00972 253 308 6.2E-11 T 15-10-2018 IPR007893 Spore coat protein U AM378_05290 7a1e53cfe4cce834da999d171287e5fc 311 SMART SM00972 93 156 2.8E-11 T 15-10-2018 IPR007893 Spore coat protein U AM378_05290 7a1e53cfe4cce834da999d171287e5fc 311 Pfam PF05229 Spore Coat Protein U domain 22 154 1.1E-15 T 15-10-2018 IPR007893 Spore coat protein U AM378_05290 7a1e53cfe4cce834da999d171287e5fc 311 Pfam PF05229 Spore Coat Protein U domain 180 306 1.9E-26 T 15-10-2018 IPR007893 Spore coat protein U AM378_24335 5270022e4dcf1c479528f8c62b947ab8 316 SUPERFAMILY SSF81464 18 116 4.91E-24 T 15-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM378_24335 5270022e4dcf1c479528f8c62b947ab8 316 Gene3D G3DSA:2.60.40.420 113 282 7.9E-60 T 15-10-2018 IPR008972 Cupredoxin AM378_24335 5270022e4dcf1c479528f8c62b947ab8 316 SUPERFAMILY SSF49503 122 281 2.07E-51 T 15-10-2018 IPR008972 Cupredoxin AM378_24335 5270022e4dcf1c479528f8c62b947ab8 316 TIGRFAM TIGR01433 CyoA: ubiquinol oxidase, subunit II 13 239 1.6E-115 T 15-10-2018 IPR006333 Cytochrome o ubiquinol oxidase subunit II GO:0016020|GO:0016682|GO:0055114 AM378_24335 5270022e4dcf1c479528f8c62b947ab8 316 Gene3D G3DSA:1.10.287.90 28 112 3.1E-33 T 15-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM378_24335 5270022e4dcf1c479528f8c62b947ab8 316 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 149 219 4.6E-5 T 15-10-2018 IPR002429 Cytochrome c oxidase subunit II-like C-terminal GO:0004129|GO:0005507|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM378_24335 5270022e4dcf1c479528f8c62b947ab8 316 PIRSF PIRSF000292 1 312 9.4E-134 T 15-10-2018 IPR006333 Cytochrome o ubiquinol oxidase subunit II GO:0016020|GO:0016682|GO:0055114 AM378_24335 5270022e4dcf1c479528f8c62b947ab8 316 Pfam PF06481 COX Aromatic Rich Motif 239 285 5.1E-20 T 15-10-2018 IPR010514 COX aromatic rich motif GO:0008827|GO:0016021|GO:0022900|GO:0055114 AM378_11045 21bc448d17b06d76622d5f8bbcff017f 431 TIGRFAM TIGR00883 2A0106: MFS transporter, metabolite:H+ symporter (MHS) family protein 23 413 1.8E-141 T 15-10-2018 IPR004736 MFS transporter, metabolite:H symporter GO:0016021|GO:0022857|GO:0055085 AM378_11045 21bc448d17b06d76622d5f8bbcff017f 431 ProSitePatterns PS00216 Sugar transport proteins signature 1. 294 311 - T 15-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AM378_11045 21bc448d17b06d76622d5f8bbcff017f 431 Gene3D G3DSA:1.20.1250.20 16 428 2.1E-59 T 15-10-2018 AM378_11045 21bc448d17b06d76622d5f8bbcff017f 431 SUPERFAMILY SSF103473 16 423 1.96E-65 T 15-10-2018 IPR036259 MFS transporter superfamily AM378_11045 21bc448d17b06d76622d5f8bbcff017f 431 ProSitePatterns PS00217 Sugar transport proteins signature 2. 126 151 - T 15-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AM378_11045 21bc448d17b06d76622d5f8bbcff017f 431 ProSitePatterns PS00216 Sugar transport proteins signature 1. 76 92 - T 15-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AM378_11045 21bc448d17b06d76622d5f8bbcff017f 431 Pfam PF00083 Sugar (and other) transporter 230 421 1.6E-10 T 15-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 AM378_11045 21bc448d17b06d76622d5f8bbcff017f 431 Pfam PF00083 Sugar (and other) transporter 21 222 1.9E-23 T 15-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 AM378_12670 dc3487b4b2d82a13c0dffeb15153ea2d 306 ProSitePatterns PS01021 Coproporphyrinogen III oxidase signature. 166 190 - T 15-10-2018 IPR018375 Coproporphyrinogen III oxidase, conserved site GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AM378_12670 dc3487b4b2d82a13c0dffeb15153ea2d 306 PIRSF PIRSF000166 3 303 1.5E-128 T 15-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AM378_12670 dc3487b4b2d82a13c0dffeb15153ea2d 306 Hamap MF_00333 Oxygen-dependent coproporphyrinogen-III oxidase [hemF]. 3 277 57.529 T 15-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AM378_12670 dc3487b4b2d82a13c0dffeb15153ea2d 306 Pfam PF01218 Coproporphyrinogen III oxidase 9 302 1.6E-132 T 15-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AM378_12670 dc3487b4b2d82a13c0dffeb15153ea2d 306 Gene3D G3DSA:3.40.1500.10 2 302 1.6E-135 T 15-10-2018 IPR036406 Oxygen-dependent coproporphyrinogen III oxidase superfamily GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AM378_12670 dc3487b4b2d82a13c0dffeb15153ea2d 306 SUPERFAMILY SSF102886 6 302 2.88E-139 T 15-10-2018 IPR036406 Oxygen-dependent coproporphyrinogen III oxidase superfamily GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AM378_12670 dc3487b4b2d82a13c0dffeb15153ea2d 306 PRINTS PR00073 Coprogen oxidase signature 125 147 1.3E-85 T 15-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AM378_12670 dc3487b4b2d82a13c0dffeb15153ea2d 306 PRINTS PR00073 Coprogen oxidase signature 90 114 1.3E-85 T 15-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AM378_12670 dc3487b4b2d82a13c0dffeb15153ea2d 306 PRINTS PR00073 Coprogen oxidase signature 31 47 1.3E-85 T 15-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AM378_12670 dc3487b4b2d82a13c0dffeb15153ea2d 306 PRINTS PR00073 Coprogen oxidase signature 48 69 1.3E-85 T 15-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AM378_12670 dc3487b4b2d82a13c0dffeb15153ea2d 306 PRINTS PR00073 Coprogen oxidase signature 262 288 1.3E-85 T 15-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AM378_12670 dc3487b4b2d82a13c0dffeb15153ea2d 306 PRINTS PR00073 Coprogen oxidase signature 162 191 1.3E-85 T 15-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AM378_12670 dc3487b4b2d82a13c0dffeb15153ea2d 306 PRINTS PR00073 Coprogen oxidase signature 234 261 1.3E-85 T 15-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AM378_23495 208da69260e1b5ac72a1e29f095c3171 257 Pfam PF00795 Carbon-nitrogen hydrolase 6 241 5.8E-32 T 15-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 AM378_23495 208da69260e1b5ac72a1e29f095c3171 257 SUPERFAMILY SSF56317 1 249 1.16E-61 T 15-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily AM378_23495 208da69260e1b5ac72a1e29f095c3171 257 Gene3D G3DSA:3.60.110.10 1 256 4.7E-82 T 15-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily AM378_23495 208da69260e1b5ac72a1e29f095c3171 257 ProSitePatterns PS01227 Uncharacterized protein family UPF0012 signature. 137 157 - T 15-10-2018 IPR001110 Uncharacterised protein family UPF0012, conserved site AM378_02900 7bdf05401f4bf146c92c84d0fb5ae781 196 Hamap MF_00278 Imidazole glycerol phosphate synthase subunit HisH [hisH]. 2 196 33.956 T 15-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 AM378_02900 7bdf05401f4bf146c92c84d0fb5ae781 196 TIGRFAM TIGR01855 IMP_synth_hisH: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 3 196 4.0E-72 T 15-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 AM378_02900 7bdf05401f4bf146c92c84d0fb5ae781 196 Pfam PF00117 Glutamine amidotransferase class-I 5 194 3.4E-19 T 15-10-2018 IPR017926 Glutamine amidotransferase AM378_02900 7bdf05401f4bf146c92c84d0fb5ae781 196 SUPERFAMILY SSF52317 3 195 5.47E-55 T 15-10-2018 IPR029062 Class I glutamine amidotransferase-like AM378_02900 7bdf05401f4bf146c92c84d0fb5ae781 196 PIRSF PIRSF000495 1 196 1.8E-65 T 15-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 AM378_02900 7bdf05401f4bf146c92c84d0fb5ae781 196 PRINTS PR00096 Glutamine amidotransferase superfamily signature 72 83 9.7E-5 T 15-10-2018 AM378_02900 7bdf05401f4bf146c92c84d0fb5ae781 196 PRINTS PR00096 Glutamine amidotransferase superfamily signature 174 187 9.7E-5 T 15-10-2018 AM378_02900 7bdf05401f4bf146c92c84d0fb5ae781 196 Gene3D G3DSA:3.40.50.880 1 196 5.9E-70 T 15-10-2018 IPR029062 Class I glutamine amidotransferase-like AM378_09265 b7fdd62d2f942d0fd6e2a043d1c5ee73 272 Pfam PF04954 Siderophore-interacting protein 137 253 1.8E-33 T 15-10-2018 IPR007037 Siderophore-interacting protein, C-terminal domain AM378_09265 b7fdd62d2f942d0fd6e2a043d1c5ee73 272 Gene3D G3DSA:3.40.50.80 133 271 3.3E-38 T 15-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AM378_09265 b7fdd62d2f942d0fd6e2a043d1c5ee73 272 SUPERFAMILY SSF63380 7 135 1.38E-12 T 15-10-2018 IPR017938 Riboflavin synthase-like beta-barrel AM378_09265 b7fdd62d2f942d0fd6e2a043d1c5ee73 272 Gene3D G3DSA:2.40.30.10 3 130 1.1E-33 T 15-10-2018 AM378_09265 b7fdd62d2f942d0fd6e2a043d1c5ee73 272 Pfam PF08021 Siderophore-interacting FAD-binding domain 16 130 9.7E-36 T 15-10-2018 IPR013113 FAD-binding 9, siderophore-interacting AM378_09130 893974cd0038fe2ec1fa279192e826f0 1253 Gene3D G3DSA:4.10.1200.10 1 28 1.7E-13 T 15-10-2018 AM378_09130 893974cd0038fe2ec1fa279192e826f0 1253 SUPERFAMILY SSF53706 4 1072 0.0 T 15-10-2018 AM378_09130 893974cd0038fe2ec1fa279192e826f0 1253 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 48 66 - T 15-10-2018 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 AM378_09130 893974cd0038fe2ec1fa279192e826f0 1253 Pfam PF00384 Molybdopterin oxidoreductase 108 835 1.5E-172 T 15-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM378_09130 893974cd0038fe2ec1fa279192e826f0 1253 TIGRFAM TIGR01580 narG: nitrate reductase, alpha subunit 2 1237 0.0 T 15-10-2018 IPR006468 Nitrate reductase, alpha subunit GO:0008940|GO:0009325|GO:0042126|GO:0055114 KEGG: 00910+1.7.5.1|MetaCyc: PWY-6748 AM378_09130 893974cd0038fe2ec1fa279192e826f0 1253 SMART SM00926 43 105 3.9E-8 T 15-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM378_09130 893974cd0038fe2ec1fa279192e826f0 1253 Pfam PF14710 Respiratory nitrate reductase alpha N-terminal 3 40 4.4E-15 T 15-10-2018 IPR028189 Nitrate reductase, alpha subunit, N-terminal KEGG: 00910+1.7.5.1|MetaCyc: PWY-6748 AM378_09130 893974cd0038fe2ec1fa279192e826f0 1253 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 779 796 - T 15-10-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 AM378_09130 893974cd0038fe2ec1fa279192e826f0 1253 SUPERFAMILY SSF50692 1082 1238 5.2E-47 T 15-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily AM378_09130 893974cd0038fe2ec1fa279192e826f0 1253 Gene3D G3DSA:3.40.50.12440 44 1247 0.0 T 15-10-2018 AM378_09130 893974cd0038fe2ec1fa279192e826f0 1253 Pfam PF01568 Molydopterin dinucleotide binding domain 1090 1204 6.9E-20 T 15-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 AM378_04405 edc355f127b7e97f8fa75e7a2e514d68 249 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 7 181 6.3E-5 T 15-10-2018 AM378_04405 edc355f127b7e97f8fa75e7a2e514d68 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 3.3E-29 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_04405 edc355f127b7e97f8fa75e7a2e514d68 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 150 169 3.3E-29 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_04405 edc355f127b7e97f8fa75e7a2e514d68 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 171 188 3.3E-29 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_04405 edc355f127b7e97f8fa75e7a2e514d68 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 210 230 3.3E-29 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_04405 edc355f127b7e97f8fa75e7a2e514d68 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 3.3E-29 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_04405 edc355f127b7e97f8fa75e7a2e514d68 249 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 15 246 2.4E-52 T 15-10-2018 AM378_04405 edc355f127b7e97f8fa75e7a2e514d68 249 SUPERFAMILY SSF51735 1 246 4.21E-69 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily AM378_04405 edc355f127b7e97f8fa75e7a2e514d68 249 Gene3D G3DSA:3.40.50.720 1 247 2.9E-71 T 15-10-2018 AM378_04405 edc355f127b7e97f8fa75e7a2e514d68 249 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 137 165 - T 15-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AM378_12530 0e02e809ab9af48fa6188860d72a65bd 300 SUPERFAMILY SSF46785 8 114 5.21E-23 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM378_12530 0e02e809ab9af48fa6188860d72a65bd 300 SUPERFAMILY SSF53850 93 296 1.03E-38 T 15-10-2018 AM378_12530 0e02e809ab9af48fa6188860d72a65bd 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 66 3.9E-19 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_12530 0e02e809ab9af48fa6188860d72a65bd 300 Gene3D G3DSA:3.40.190.290 94 292 1.6E-53 T 15-10-2018 AM378_12530 0e02e809ab9af48fa6188860d72a65bd 300 Pfam PF03466 LysR substrate binding domain 91 293 4.6E-40 T 15-10-2018 IPR005119 LysR, substrate-binding AM378_12530 0e02e809ab9af48fa6188860d72a65bd 300 Gene3D G3DSA:1.10.10.10 5 89 1.5E-21 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_05810 a68b467ce2c2941c71c0b4af79f519ac 115 TIGRFAM TIGR00365 TIGR00365: monothiol glutaredoxin, Grx4 family 5 101 3.3E-47 T 15-10-2018 IPR004480 Monothiol glutaredoxin-related AM378_05810 a68b467ce2c2941c71c0b4af79f519ac 115 Gene3D G3DSA:3.40.30.10 1 108 8.0E-33 T 15-10-2018 AM378_05810 a68b467ce2c2941c71c0b4af79f519ac 115 PIRSF PIRSF005894 1 108 2.1E-52 T 15-10-2018 IPR014434 Monothiol glutaredoxin GO:0015036 Reactome: R-HSA-1362409 AM378_05810 a68b467ce2c2941c71c0b4af79f519ac 115 SUPERFAMILY SSF52833 2 102 3.13E-35 T 15-10-2018 IPR036249 Thioredoxin-like superfamily AM378_05810 a68b467ce2c2941c71c0b4af79f519ac 115 Pfam PF00462 Glutaredoxin 17 81 1.1E-18 T 15-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 AM378_20210 5bb96066f5a99150e2ee38cd5d4924af 451 SUPERFAMILY SSF103473 14 441 9.68E-84 T 15-10-2018 IPR036259 MFS transporter superfamily AM378_20210 5bb96066f5a99150e2ee38cd5d4924af 451 Pfam PF07690 Major Facilitator Superfamily 34 400 1.7E-44 T 15-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM378_20210 5bb96066f5a99150e2ee38cd5d4924af 451 ProSitePatterns PS00942 glpT family of transporters signature. 153 169 - T 15-10-2018 IPR021159 Glycerate/sugar phosphate transporter, conserved site Reactome: R-HSA-3229133|Reactome: R-HSA-70263 AM378_20210 5bb96066f5a99150e2ee38cd5d4924af 451 TIGRFAM TIGR00712 glpT: glycerol-3-phosphate transporter 1 440 3.9E-262 T 15-10-2018 IPR005267 Glycerol-3-phosphate transporter GO:0015169|GO:0015794|GO:0016021 AM378_20210 5bb96066f5a99150e2ee38cd5d4924af 451 Gene3D G3DSA:1.20.1250.20 19 226 1.5E-57 T 15-10-2018 AM378_20210 5bb96066f5a99150e2ee38cd5d4924af 451 TIGRFAM TIGR00881 2A0104: phosphoglycerate transporter family protein 35 417 1.5E-167 T 15-10-2018 AM378_20210 5bb96066f5a99150e2ee38cd5d4924af 451 PIRSF PIRSF002808 5 450 9.1E-171 T 15-10-2018 IPR000849 Sugar phosphate transporter GO:0016021|GO:0022857|GO:0055085 AM378_20210 5bb96066f5a99150e2ee38cd5d4924af 451 Gene3D G3DSA:1.20.1250.20 240 447 2.3E-61 T 15-10-2018 AM378_21910 fc637183269bf332b43e4a85b2aa796b 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 1.7E-20 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_21910 fc637183269bf332b43e4a85b2aa796b 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 8.6E-8 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_21910 fc637183269bf332b43e4a85b2aa796b 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 8.6E-8 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_21910 fc637183269bf332b43e4a85b2aa796b 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 8.6E-8 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_21910 fc637183269bf332b43e4a85b2aa796b 305 Pfam PF03466 LysR substrate binding domain 93 294 1.9E-41 T 15-10-2018 IPR005119 LysR, substrate-binding AM378_21910 fc637183269bf332b43e4a85b2aa796b 305 Gene3D G3DSA:1.10.10.10 1 86 5.1E-27 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_21910 fc637183269bf332b43e4a85b2aa796b 305 Gene3D G3DSA:3.40.190.290 93 300 1.8E-48 T 15-10-2018 AM378_21910 fc637183269bf332b43e4a85b2aa796b 305 SUPERFAMILY SSF53850 93 297 5.57E-42 T 15-10-2018 AM378_21910 fc637183269bf332b43e4a85b2aa796b 305 SUPERFAMILY SSF46785 3 86 4.45E-24 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM378_03555 25eb4484333096471721c2339f2decba 440 Gene3D G3DSA:1.20.58.590 119 311 6.4E-87 T 15-10-2018 IPR036141 MukF, middle domain superfamily AM378_03555 25eb4484333096471721c2339f2decba 440 SUPERFAMILY SSF140570 119 281 2.09E-76 T 15-10-2018 IPR036141 MukF, middle domain superfamily AM378_03555 25eb4484333096471721c2339f2decba 440 Gene3D G3DSA:1.10.225.40 353 440 1.1E-43 T 15-10-2018 IPR038198 MukF, C-terminal domain superfamily AM378_03555 25eb4484333096471721c2339f2decba 440 Pfam PF17193 MukF C-terminal domain 283 440 3.1E-80 T 15-10-2018 IPR033441 Chromosome partition protein MukF, C-terminal domain AM378_03555 25eb4484333096471721c2339f2decba 440 PIRSF PIRSF018282 1 440 7.1E-248 T 15-10-2018 IPR005582 Chromosome partition protein MukF GO:0005509|GO:0006260|GO:0007059 AM378_03555 25eb4484333096471721c2339f2decba 440 Pfam PF17192 MukF middle domain 121 281 1.1E-84 T 15-10-2018 IPR033440 Chromosome partition protein MukF, middle domain AM378_03555 25eb4484333096471721c2339f2decba 440 SUPERFAMILY SSF46785 8 118 3.9E-50 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM378_03555 25eb4484333096471721c2339f2decba 440 Pfam PF03882 MukF winged-helix domain 3 117 8.9E-59 T 15-10-2018 IPR033439 Chromosome partition protein MukF, winged-helix domain AM378_03555 25eb4484333096471721c2339f2decba 440 Hamap MF_01803 Chromosome partition protein MukF [mukF]. 1 440 55.986 T 15-10-2018 IPR005582 Chromosome partition protein MukF GO:0005509|GO:0006260|GO:0007059 AM378_03555 25eb4484333096471721c2339f2decba 440 Gene3D G3DSA:1.10.10.10 24 118 1.8E-53 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_00880 0b822ea8b0e27ea7639e5a523cbad514 179 Pfam PF00258 Flavodoxin 6 164 1.1E-32 T 15-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 AM378_00880 0b822ea8b0e27ea7639e5a523cbad514 179 ProSitePatterns PS00201 Flavodoxin signature. 6 22 - T 15-10-2018 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 AM378_00880 0b822ea8b0e27ea7639e5a523cbad514 179 PIRSF PIRSF038996 1 176 1.7E-68 T 15-10-2018 IPR010086 Flavodoxin, long chain GO:0010181 AM378_00880 0b822ea8b0e27ea7639e5a523cbad514 179 TIGRFAM TIGR01752 flav_long: flavodoxin 4 172 1.3E-73 T 15-10-2018 IPR010086 Flavodoxin, long chain GO:0010181 AM378_00880 0b822ea8b0e27ea7639e5a523cbad514 179 Gene3D G3DSA:3.40.50.360 2 179 6.6E-56 T 15-10-2018 IPR029039 Flavoprotein-like superfamily AM378_00880 0b822ea8b0e27ea7639e5a523cbad514 179 SUPERFAMILY SSF52218 4 173 1.4E-51 T 15-10-2018 IPR029039 Flavoprotein-like superfamily AM378_10805 01e96c23787e0066eb6f37fc332caa94 409 ProSitePatterns PS00778 Histidine acid phosphatases active site signature. 302 318 - T 15-10-2018 IPR033379 Histidine acid phosphatase active site AM378_10805 01e96c23787e0066eb6f37fc332caa94 409 ProSitePatterns PS00616 Histidine acid phosphatases phosphohistidine signature. 27 41 - T 15-10-2018 IPR033379 Histidine acid phosphatase active site AM378_10805 01e96c23787e0066eb6f37fc332caa94 409 SUPERFAMILY SSF53254 24 408 2.62E-80 T 15-10-2018 IPR029033 Histidine phosphatase superfamily AM378_10805 01e96c23787e0066eb6f37fc332caa94 409 Pfam PF00328 Histidine phosphatase superfamily (branch 2) 26 357 3.2E-18 T 15-10-2018 IPR000560 Histidine phosphatase superfamily, clade-2 AM378_10805 01e96c23787e0066eb6f37fc332caa94 409 Gene3D G3DSA:3.40.50.1240 40 270 3.3E-152 T 15-10-2018 IPR029033 Histidine phosphatase superfamily AM378_10805 01e96c23787e0066eb6f37fc332caa94 409 Gene3D G3DSA:3.40.50.1240 25 401 3.3E-152 T 15-10-2018 IPR029033 Histidine phosphatase superfamily AM378_07360 00fc80628b604cc16f5c77fd99fe762f 298 PRINTS PR00412 Epoxide hydrolase signature 62 77 5.3E-13 T 15-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AM378_07360 00fc80628b604cc16f5c77fd99fe762f 298 PRINTS PR00412 Epoxide hydrolase signature 42 60 5.3E-13 T 15-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AM378_07360 00fc80628b604cc16f5c77fd99fe762f 298 PRINTS PR00412 Epoxide hydrolase signature 106 119 5.3E-13 T 15-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AM378_07360 00fc80628b604cc16f5c77fd99fe762f 298 PRINTS PR00412 Epoxide hydrolase signature 267 289 5.3E-13 T 15-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AM378_07360 00fc80628b604cc16f5c77fd99fe762f 298 PRINTS PR00111 Alpha/beta hydrolase fold signature 106 119 1.5E-5 T 15-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AM378_07360 00fc80628b604cc16f5c77fd99fe762f 298 PRINTS PR00111 Alpha/beta hydrolase fold signature 120 133 1.5E-5 T 15-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AM378_07360 00fc80628b604cc16f5c77fd99fe762f 298 PRINTS PR00111 Alpha/beta hydrolase fold signature 62 77 1.5E-5 T 15-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AM378_07360 00fc80628b604cc16f5c77fd99fe762f 298 SUPERFAMILY SSF53474 15 291 1.17E-67 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold AM378_07360 00fc80628b604cc16f5c77fd99fe762f 298 Gene3D G3DSA:3.40.50.1820 15 291 6.3E-82 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold AM378_07360 00fc80628b604cc16f5c77fd99fe762f 298 Pfam PF00561 alpha/beta hydrolase fold 37 165 1.2E-18 T 15-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AM378_17755 0ae65507132685525045672d5fe1bb17 435 Pfam PF02056 Family 4 glycosyl hydrolase 5 186 1.4E-54 T 15-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 AM378_17755 0ae65507132685525045672d5fe1bb17 435 SUPERFAMILY SSF51735 4 169 1.73E-49 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily AM378_17755 0ae65507132685525045672d5fe1bb17 435 Gene3D G3DSA:3.90.110.10 170 435 8.2E-101 T 15-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 AM378_17755 0ae65507132685525045672d5fe1bb17 435 SUPERFAMILY SSF56327 172 434 1.77E-91 T 15-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 AM378_17755 0ae65507132685525045672d5fe1bb17 435 PRINTS PR00732 Glycosyl hydrolase family 4 signature 77 93 1.5E-43 T 15-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 AM378_17755 0ae65507132685525045672d5fe1bb17 435 PRINTS PR00732 Glycosyl hydrolase family 4 signature 5 20 1.5E-43 T 15-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 AM378_17755 0ae65507132685525045672d5fe1bb17 435 PRINTS PR00732 Glycosyl hydrolase family 4 signature 192 204 1.5E-43 T 15-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 AM378_17755 0ae65507132685525045672d5fe1bb17 435 PRINTS PR00732 Glycosyl hydrolase family 4 signature 141 158 1.5E-43 T 15-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 AM378_17755 0ae65507132685525045672d5fe1bb17 435 PRINTS PR00732 Glycosyl hydrolase family 4 signature 98 111 1.5E-43 T 15-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 AM378_17755 0ae65507132685525045672d5fe1bb17 435 PRINTS PR00732 Glycosyl hydrolase family 4 signature 112 132 1.5E-43 T 15-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 AM378_17755 0ae65507132685525045672d5fe1bb17 435 PRINTS PR00732 Glycosyl hydrolase family 4 signature 166 177 1.5E-43 T 15-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 AM378_17755 0ae65507132685525045672d5fe1bb17 435 ProSitePatterns PS01324 Glycosyl hydrolases family 4 signature. 141 171 - T 15-10-2018 IPR019802 Glycoside hydrolase, family 4, conserved site GO:0004553|GO:0005975 AM378_17755 0ae65507132685525045672d5fe1bb17 435 Pfam PF11975 Family 4 glycosyl hydrolase C-terminal domain 196 410 1.8E-53 T 15-10-2018 IPR022616 Glycosyl hydrolase, family 4, C-terminal GO:0004553 AM378_17755 0ae65507132685525045672d5fe1bb17 435 Gene3D G3DSA:3.40.50.720 1 169 4.3E-60 T 15-10-2018 AM378_20225 0a1382fdd5ff9cf53a1119580326c215 422 PIRSF PIRSF000141 1 422 7.0E-168 T 15-10-2018 IPR009158 Glycerol-3-phosphate dehydrogenase, GlpB subunit GO:0004368|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 AM378_20225 0a1382fdd5ff9cf53a1119580326c215 422 Gene3D G3DSA:3.50.50.60 1 45 7.0E-9 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AM378_20225 0a1382fdd5ff9cf53a1119580326c215 422 TIGRFAM TIGR03378 glycerol3P_GlpB: glycerol-3-phosphate dehydrogenase, anaerobic, B subunit 3 416 1.4E-170 T 15-10-2018 IPR009158 Glycerol-3-phosphate dehydrogenase, GlpB subunit GO:0004368|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 AM378_20225 0a1382fdd5ff9cf53a1119580326c215 422 Gene3D G3DSA:3.50.50.60 246 422 1.0E-5 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AM378_20225 0a1382fdd5ff9cf53a1119580326c215 422 Hamap MF_00753 Anaerobic glycerol-3-phosphate dehydrogenase subunit B [glpB]. 1 420 49.116 T 15-10-2018 IPR009158 Glycerol-3-phosphate dehydrogenase, GlpB subunit GO:0004368|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 AM378_20225 0a1382fdd5ff9cf53a1119580326c215 422 SUPERFAMILY SSF51905 1 419 3.52E-30 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AM378_20225 0a1382fdd5ff9cf53a1119580326c215 422 Pfam PF00890 FAD binding domain 4 404 2.6E-65 T 15-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 AM378_08735 15f7c8575f270d442bdea7ae8ab1c3e3 567 Gene3D G3DSA:1.10.287.460 349 457 3.3E-21 T 15-10-2018 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily GO:0006457 AM378_08735 15f7c8575f270d442bdea7ae8ab1c3e3 567 SUPERFAMILY SSF54534 366 564 1.77E-19 T 15-10-2018 AM378_08735 15f7c8575f270d442bdea7ae8ab1c3e3 567 Gene3D G3DSA:3.10.50.40 458 567 8.8E-16 T 15-10-2018 AM378_08735 15f7c8575f270d442bdea7ae8ab1c3e3 567 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 473 561 2.2E-7 T 15-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain AM378_08735 15f7c8575f270d442bdea7ae8ab1c3e3 567 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 357 468 9.4E-19 T 15-10-2018 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 AM378_14590 50ec83a38bb189ecf9556d74eed4bf78 294 SMART SM00849 41 227 9.0E-21 T 15-10-2018 IPR001279 Metallo-beta-lactamase AM378_14590 50ec83a38bb189ecf9556d74eed4bf78 294 SUPERFAMILY SSF56281 26 248 1.54E-41 T 15-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AM378_14590 50ec83a38bb189ecf9556d74eed4bf78 294 Pfam PF00753 Metallo-beta-lactamase superfamily 40 227 5.2E-9 T 15-10-2018 IPR001279 Metallo-beta-lactamase AM378_14590 50ec83a38bb189ecf9556d74eed4bf78 294 Gene3D G3DSA:3.60.15.10 22 262 1.2E-30 T 15-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AM378_14175 10494f1dfd3e3c626a6a3e14be6c82e8 137 Gene3D G3DSA:3.30.160.20 1 137 4.7E-40 T 15-10-2018 AM378_14175 10494f1dfd3e3c626a6a3e14be6c82e8 137 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 21 37 - T 15-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 AM378_14175 10494f1dfd3e3c626a6a3e14be6c82e8 137 SUPERFAMILY SSF75620 6 113 9.02E-15 T 15-10-2018 AM378_14175 10494f1dfd3e3c626a6a3e14be6c82e8 137 Pfam PF00472 RF-1 domain 7 129 8.4E-24 T 15-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 AM378_16815 44729090ae8278cc41f9353a53ad9f43 91 Pfam PF12773 Double zinc ribbon 41 87 6.4E-11 T 15-10-2018 IPR025874 Double zinc ribbon AM378_08030 8bc4845211f0c10cc044b38e38f1e2f9 890 Gene3D G3DSA:3.30.499.20 6 372 4.1E-158 T 15-10-2018 AM378_08030 8bc4845211f0c10cc044b38e38f1e2f9 890 Pfam PF00330 Aconitase family (aconitate hydratase) 74 562 1.2E-181 T 15-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AM378_08030 8bc4845211f0c10cc044b38e38f1e2f9 890 TIGRFAM TIGR01341 aconitase_1: aconitate hydratase 1 19 890 0.0 T 15-10-2018 IPR006249 Aconitase/Iron-responsive element-binding protein 2 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3|Reactome: R-HSA-917937 AM378_08030 8bc4845211f0c10cc044b38e38f1e2f9 890 SUPERFAMILY SSF52016 630 890 1.79E-90 T 15-10-2018 AM378_08030 8bc4845211f0c10cc044b38e38f1e2f9 890 Gene3D G3DSA:1.10.1440.20 592 651 1.1E-17 T 15-10-2018 AM378_08030 8bc4845211f0c10cc044b38e38f1e2f9 890 PRINTS PR00415 Aconitase family signature 431 442 4.2E-42 T 15-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AM378_08030 8bc4845211f0c10cc044b38e38f1e2f9 890 PRINTS PR00415 Aconitase family signature 493 506 4.2E-42 T 15-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AM378_08030 8bc4845211f0c10cc044b38e38f1e2f9 890 PRINTS PR00415 Aconitase family signature 279 292 4.2E-42 T 15-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AM378_08030 8bc4845211f0c10cc044b38e38f1e2f9 890 PRINTS PR00415 Aconitase family signature 170 178 4.2E-42 T 15-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AM378_08030 8bc4845211f0c10cc044b38e38f1e2f9 890 PRINTS PR00415 Aconitase family signature 217 232 4.2E-42 T 15-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AM378_08030 8bc4845211f0c10cc044b38e38f1e2f9 890 PRINTS PR00415 Aconitase family signature 293 306 4.2E-42 T 15-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AM378_08030 8bc4845211f0c10cc044b38e38f1e2f9 890 PRINTS PR00415 Aconitase family signature 203 216 4.2E-42 T 15-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AM378_08030 8bc4845211f0c10cc044b38e38f1e2f9 890 PRINTS PR00415 Aconitase family signature 372 386 4.2E-42 T 15-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AM378_08030 8bc4845211f0c10cc044b38e38f1e2f9 890 PRINTS PR00415 Aconitase family signature 146 159 4.2E-42 T 15-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AM378_08030 8bc4845211f0c10cc044b38e38f1e2f9 890 Gene3D G3DSA:3.20.19.10 653 890 1.3E-108 T 15-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 AM378_08030 8bc4845211f0c10cc044b38e38f1e2f9 890 Pfam PF00694 Aconitase C-terminal domain 691 818 4.2E-50 T 15-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 AM378_08030 8bc4845211f0c10cc044b38e38f1e2f9 890 ProSitePatterns PS01244 Aconitase family signature 2. 493 506 - T 15-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 AM378_08030 8bc4845211f0c10cc044b38e38f1e2f9 890 SUPERFAMILY SSF53732 10 626 1.96E-221 T 15-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 AM378_08030 8bc4845211f0c10cc044b38e38f1e2f9 890 ProSitePatterns PS00450 Aconitase family signature 1. 427 443 - T 15-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 AM378_08030 8bc4845211f0c10cc044b38e38f1e2f9 890 Gene3D G3DSA:3.30.499.10 373 590 8.9E-103 T 15-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 AM378_05225 63cda384f5271834bd23342063235d46 456 Gene3D G3DSA:2.30.40.10 9 433 2.5E-185 T 15-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 AM378_05225 63cda384f5271834bd23342063235d46 456 SUPERFAMILY SSF51556 50 374 4.68E-70 T 15-10-2018 IPR032466 Metal-dependent hydrolase AM378_05225 63cda384f5271834bd23342063235d46 456 Gene3D G3DSA:3.20.20.140 52 445 2.5E-185 T 15-10-2018 AM378_05225 63cda384f5271834bd23342063235d46 456 Pfam PF01979 Amidohydrolase family 49 429 5.2E-30 T 15-10-2018 IPR006680 Amidohydrolase-related GO:0016787 AM378_05225 63cda384f5271834bd23342063235d46 456 TIGRFAM TIGR02022 hutF: formiminoglutamate deiminase 2 453 4.8E-216 T 15-10-2018 IPR010252 Formiminoglutamate deiminase AM378_05225 63cda384f5271834bd23342063235d46 456 SUPERFAMILY SSF51338 365 434 1.85E-8 T 15-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 AM378_17905 8d74fe995ca49599e0d24df6a5a0e460 239 Pfam PF00486 Transcriptional regulatory protein, C terminal 157 232 2.2E-22 T 15-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AM378_17905 8d74fe995ca49599e0d24df6a5a0e460 239 SUPERFAMILY SSF52172 3 126 1.15E-41 T 15-10-2018 IPR011006 CheY-like superfamily AM378_17905 8d74fe995ca49599e0d24df6a5a0e460 239 SUPERFAMILY SSF46894 132 234 2.07E-26 T 15-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AM378_17905 8d74fe995ca49599e0d24df6a5a0e460 239 SMART SM00862 156 232 1.7E-23 T 15-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AM378_17905 8d74fe995ca49599e0d24df6a5a0e460 239 Gene3D G3DSA:3.40.50.2300 1 126 3.2E-40 T 15-10-2018 AM378_17905 8d74fe995ca49599e0d24df6a5a0e460 239 SMART SM00448 5 116 1.2E-44 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM378_17905 8d74fe995ca49599e0d24df6a5a0e460 239 Pfam PF00072 Response regulator receiver domain 7 117 1.3E-29 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM378_17905 8d74fe995ca49599e0d24df6a5a0e460 239 Gene3D G3DSA:1.10.10.10 130 239 1.2E-39 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_19235 a30ba70d70fb8d79ad1247f2fd91ab9d 502 Gene3D G3DSA:1.20.58.1510 287 494 2.9E-83 T 15-10-2018 AM378_19235 a30ba70d70fb8d79ad1247f2fd91ab9d 502 SMART SM00382 38 187 9.6E-6 T 15-10-2018 IPR003593 AAA+ ATPase domain AM378_19235 a30ba70d70fb8d79ad1247f2fd91ab9d 502 Gene3D G3DSA:1.10.8.300 222 285 4.9E-27 T 15-10-2018 AM378_19235 a30ba70d70fb8d79ad1247f2fd91ab9d 502 SUPERFAMILY SSF52540 14 285 3.02E-18 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_19235 a30ba70d70fb8d79ad1247f2fd91ab9d 502 Gene3D G3DSA:3.40.50.300 2 221 1.4E-62 T 15-10-2018 AM378_19235 a30ba70d70fb8d79ad1247f2fd91ab9d 502 Pfam PF12592 Protein of unknown function (DUF3763) 443 495 1.5E-18 T 15-10-2018 IPR022547 ATPase, RavA, C-terminal GO:0042626 AM378_19235 a30ba70d70fb8d79ad1247f2fd91ab9d 502 Gene3D G3DSA:2.40.128.430 331 441 2.9E-83 T 15-10-2018 AM378_19235 a30ba70d70fb8d79ad1247f2fd91ab9d 502 Pfam PF07728 AAA domain (dynein-related subfamily) 41 171 2.0E-25 T 15-10-2018 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 AM378_17290 60aac5c1b03bbdd595014ee168ce9257 435 PIRSF PIRSF001362 1 435 2.5E-223 T 15-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 AM378_17290 60aac5c1b03bbdd595014ee168ce9257 435 ProSitePatterns PS00161 Isocitrate lyase signature. 194 199 - T 15-10-2018 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site GO:0003824 AM378_17290 60aac5c1b03bbdd595014ee168ce9257 435 Gene3D G3DSA:3.20.20.60 1 418 1.6E-185 T 15-10-2018 AM378_17290 60aac5c1b03bbdd595014ee168ce9257 435 TIGRFAM TIGR01346 isocit_lyase: isocitrate lyase 9 256 9.6E-114 T 15-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 AM378_17290 60aac5c1b03bbdd595014ee168ce9257 435 TIGRFAM TIGR01346 isocit_lyase: isocitrate lyase 257 435 4.1E-89 T 15-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 AM378_17290 60aac5c1b03bbdd595014ee168ce9257 435 Pfam PF00463 Isocitrate lyase family 258 435 2.8E-48 T 15-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 AM378_17290 60aac5c1b03bbdd595014ee168ce9257 435 Pfam PF00463 Isocitrate lyase family 9 256 4.4E-61 T 15-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 AM378_17290 60aac5c1b03bbdd595014ee168ce9257 435 SUPERFAMILY SSF51621 6 418 3.77E-152 T 15-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 AM378_21285 00440496eda50ff70efee816bbeecc3c 220 Gene3D G3DSA:3.40.50.2300 1 122 5.4E-38 T 15-10-2018 AM378_21285 00440496eda50ff70efee816bbeecc3c 220 SMART SM00862 145 216 3.4E-22 T 15-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AM378_21285 00440496eda50ff70efee816bbeecc3c 220 Gene3D G3DSA:1.10.10.10 123 218 8.5E-29 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_21285 00440496eda50ff70efee816bbeecc3c 220 SMART SM00448 1 112 2.5E-35 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM378_21285 00440496eda50ff70efee816bbeecc3c 220 SUPERFAMILY SSF52172 1 175 8.64E-39 T 15-10-2018 IPR011006 CheY-like superfamily AM378_21285 00440496eda50ff70efee816bbeecc3c 220 Pfam PF00072 Response regulator receiver domain 4 112 2.1E-24 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM378_21285 00440496eda50ff70efee816bbeecc3c 220 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 216 1.5E-20 T 15-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AM378_19955 7ec208106a862d853e938ad9ffd40098 428 Gene3D G3DSA:1.10.3860.10 1 419 4.0E-122 T 15-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 AM378_19955 7ec208106a862d853e938ad9ffd40098 428 Pfam PF00375 Sodium:dicarboxylate symporter family 9 401 9.9E-112 T 15-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AM378_19955 7ec208106a862d853e938ad9ffd40098 428 Hamap MF_01300 C4-dicarboxylate transport protein [dctA]. 2 428 38.761 T 15-10-2018 IPR023954 C4-dicarboxylate transport protein GO:0006835|GO:0015293|GO:0016021 AM378_19955 7ec208106a862d853e938ad9ffd40098 428 ProSitePatterns PS00713 Sodium:dicarboxylate symporter family signature 1. 36 51 - T 15-10-2018 IPR018107 Sodium:dicarboxylate symporter, conserved site AM378_19955 7ec208106a862d853e938ad9ffd40098 428 ProSitePatterns PS00714 Sodium:dicarboxylate symporter family signature 2. 295 318 - T 15-10-2018 IPR018107 Sodium:dicarboxylate symporter, conserved site AM378_19955 7ec208106a862d853e938ad9ffd40098 428 SUPERFAMILY SSF118215 9 401 7.06E-121 T 15-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 AM378_19955 7ec208106a862d853e938ad9ffd40098 428 PRINTS PR00173 Glutamate-aspartate symporter signature 292 318 4.5E-37 T 15-10-2018 AM378_19955 7ec208106a862d853e938ad9ffd40098 428 PRINTS PR00173 Glutamate-aspartate symporter signature 327 346 4.5E-37 T 15-10-2018 AM378_19955 7ec208106a862d853e938ad9ffd40098 428 PRINTS PR00173 Glutamate-aspartate symporter signature 145 167 4.5E-37 T 15-10-2018 AM378_19955 7ec208106a862d853e938ad9ffd40098 428 PRINTS PR00173 Glutamate-aspartate symporter signature 44 64 4.5E-37 T 15-10-2018 AM378_19955 7ec208106a862d853e938ad9ffd40098 428 PRINTS PR00173 Glutamate-aspartate symporter signature 74 99 4.5E-37 T 15-10-2018 AM378_19955 7ec208106a862d853e938ad9ffd40098 428 PRINTS PR00173 Glutamate-aspartate symporter signature 3 23 4.5E-37 T 15-10-2018 AM378_19955 7ec208106a862d853e938ad9ffd40098 428 PRINTS PR00173 Glutamate-aspartate symporter signature 192 211 4.5E-37 T 15-10-2018 AM378_05455 31d1a24001b3591d8d02810e53907f6d 99 Pfam PF11080 Endoribonuclease GhoS 1 93 4.0E-36 T 15-10-2018 IPR022597 Endoribonuclease antitoxin GhoS GO:0004521 AM378_05455 31d1a24001b3591d8d02810e53907f6d 99 Gene3D G3DSA:3.30.70.2360 8 97 7.8E-17 T 15-10-2018 IPR038241 Endoribonuclease antitoxin GhoS superfamily GO:0004521 AM378_05455 31d1a24001b3591d8d02810e53907f6d 99 ProDom PD066031 YDIZ CYTOPLASMIC STY1786 9 91 7.0E-14 T 15-10-2018 IPR020499 Uncharacterised protein family YdiZ AM378_09955 1e001e6b6dc2acbeccc8c15e42104526 160 Gene3D G3DSA:2.30.110.20 1 160 2.6E-58 T 15-10-2018 IPR036624 Hcp1-like superfamily AM378_09955 1e001e6b6dc2acbeccc8c15e42104526 160 Pfam PF05638 Type VI secretion system effector, Hcp 6 131 5.5E-38 T 15-10-2018 IPR008514 Type VI secretion system effector, Hcp AM378_09955 1e001e6b6dc2acbeccc8c15e42104526 160 SUPERFAMILY SSF141452 2 158 4.32E-50 T 15-10-2018 IPR036624 Hcp1-like superfamily AM378_11845 700cb4324a1d25904e181960430188b3 718 SUPERFAMILY SSF75138 229 353 7.85E-26 T 15-10-2018 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily AM378_11845 700cb4324a1d25904e181960430188b3 718 Gene3D G3DSA:3.40.50.10950 398 708 2.7E-135 T 15-10-2018 AM378_11845 700cb4324a1d25904e181960430188b3 718 Gene3D G3DSA:3.40.50.300 1 205 1.3E-11 T 15-10-2018 AM378_11845 700cb4324a1d25904e181960430188b3 718 Gene3D G3DSA:3.40.50.10750 529 682 2.7E-135 T 15-10-2018 AM378_11845 700cb4324a1d25904e181960430188b3 718 Pfam PF07085 DRTGG domain 233 344 6.7E-29 T 15-10-2018 IPR010766 DRTGG KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 AM378_11845 700cb4324a1d25904e181960430188b3 718 Gene3D G3DSA:3.40.1390.20 225 366 1.2E-14 T 15-10-2018 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily AM378_11845 700cb4324a1d25904e181960430188b3 718 SUPERFAMILY SSF52540 3 240 1.22E-27 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_11845 700cb4324a1d25904e181960430188b3 718 SUPERFAMILY SSF53659 392 709 7.4E-94 T 15-10-2018 AM378_11845 700cb4324a1d25904e181960430188b3 718 TIGRFAM TIGR00651 pta: phosphate acetyltransferase 406 706 3.8E-136 T 15-10-2018 IPR004614 Phosphate acetyltransferase GO:0016407 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 AM378_11845 700cb4324a1d25904e181960430188b3 718 Pfam PF01515 Phosphate acetyl/butaryl transferase 391 706 5.0E-127 T 15-10-2018 IPR002505 Phosphate acetyl/butaryl transferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 AM378_11845 700cb4324a1d25904e181960430188b3 718 PIRSF PIRSF006107 1 714 0.0 T 15-10-2018 IPR016475 Phosphate acetyltransferase, bacteria GO:0008959 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 AM378_11845 700cb4324a1d25904e181960430188b3 718 Pfam PF13500 AAA domain 3 229 2.0E-51 T 15-10-2018 AM378_07020 036e1951c798c8423cb8616699c63a1d 127 Gene3D G3DSA:3.30.460.10 13 127 1.2E-16 T 15-10-2018 AM378_07020 036e1951c798c8423cb8616699c63a1d 127 SUPERFAMILY SSF81301 16 125 4.58E-16 T 15-10-2018 AM378_07020 036e1951c798c8423cb8616699c63a1d 127 Pfam PF04229 GrpB protein 16 123 9.3E-15 T 15-10-2018 IPR007344 GrpB/Dephospho-CoA kinase AM378_05790 806836d0fd6694964097b7eea76dc45a 341 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 3.2E-6 T 15-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM378_05790 806836d0fd6694964097b7eea76dc45a 341 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 3.2E-6 T 15-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM378_05790 806836d0fd6694964097b7eea76dc45a 341 Gene3D G3DSA:1.10.260.40 3 59 5.8E-26 T 15-10-2018 AM378_05790 806836d0fd6694964097b7eea76dc45a 341 SUPERFAMILY SSF53822 60 337 3.34E-95 T 15-10-2018 IPR028082 Periplasmic binding protein-like I AM378_05790 806836d0fd6694964097b7eea76dc45a 341 Hamap MF_01277 HTH-type transcriptional repressor PurR [purR]. 1 335 62.701 T 15-10-2018 IPR023588 Transcription regulator HTH, PurR GO:0006355 AM378_05790 806836d0fd6694964097b7eea76dc45a 341 Gene3D G3DSA:3.40.50.2300 162 324 2.9E-100 T 15-10-2018 AM378_05790 806836d0fd6694964097b7eea76dc45a 341 Pfam PF13377 Periplasmic binding protein-like domain 171 331 2.4E-39 T 15-10-2018 AM378_05790 806836d0fd6694964097b7eea76dc45a 341 Gene3D G3DSA:3.40.50.2300 69 323 2.9E-100 T 15-10-2018 AM378_05790 806836d0fd6694964097b7eea76dc45a 341 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 15-10-2018 AM378_05790 806836d0fd6694964097b7eea76dc45a 341 SUPERFAMILY SSF47413 1 59 7.31E-17 T 15-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AM378_05790 806836d0fd6694964097b7eea76dc45a 341 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 3.0E-19 T 15-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM378_05790 806836d0fd6694964097b7eea76dc45a 341 SMART SM00354 1 71 3.4E-37 T 15-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM378_11745 b8c5a052f16ee41d08691bd94c861944 509 Pfam PF00361 Proton-conducting membrane transporter 134 430 3.9E-71 T 15-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM378_11745 b8c5a052f16ee41d08691bd94c861944 509 TIGRFAM TIGR01972 NDH_I_M: proton-translocating NADH-quinone oxidoreductase, chain M 3 495 2.7E-182 T 15-10-2018 IPR010227 NADH-quinone oxidoreductase, chain M/4 GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM378_11745 b8c5a052f16ee41d08691bd94c861944 509 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 174 198 2.2E-36 T 15-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM378_11745 b8c5a052f16ee41d08691bd94c861944 509 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 389 415 2.2E-36 T 15-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM378_11745 b8c5a052f16ee41d08691bd94c861944 509 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 249 273 2.2E-36 T 15-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM378_11745 b8c5a052f16ee41d08691bd94c861944 509 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 139 158 2.2E-36 T 15-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM378_11745 b8c5a052f16ee41d08691bd94c861944 509 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 337 356 2.2E-36 T 15-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM378_05945 970406f7d9afd822127958baa7fe071a 130 Gene3D G3DSA:3.10.450.50 1 130 1.5E-35 T 15-10-2018 AM378_05945 970406f7d9afd822127958baa7fe071a 130 Pfam PF12680 SnoaL-like domain 8 114 5.2E-14 T 15-10-2018 IPR037401 SnoaL-like domain AM378_05945 970406f7d9afd822127958baa7fe071a 130 SUPERFAMILY SSF54427 1 128 1.53E-36 T 15-10-2018 IPR032710 NTF2-like domain superfamily AM378_01410 e91d87234abf6858a40eb8c405f557e7 319 Gene3D G3DSA:3.40.50.720 107 304 3.7E-120 T 15-10-2018 AM378_01410 e91d87234abf6858a40eb8c405f557e7 319 SUPERFAMILY SSF51735 109 289 7.47E-50 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily AM378_01410 e91d87234abf6858a40eb8c405f557e7 319 SUPERFAMILY SSF52283 1 127 8.72E-25 T 15-10-2018 AM378_01410 e91d87234abf6858a40eb8c405f557e7 319 Gene3D G3DSA:3.40.50.720 4 312 3.7E-120 T 15-10-2018 AM378_01410 e91d87234abf6858a40eb8c405f557e7 319 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 24 315 2.5E-12 T 15-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 AM378_01410 e91d87234abf6858a40eb8c405f557e7 319 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 114 288 3.7E-53 T 15-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 AM378_13805 1d9ed6d4adbe1d244002fc3a2af876ca 501 Gene3D G3DSA:1.20.1250.20 260 496 2.1E-15 T 15-10-2018 AM378_13805 1d9ed6d4adbe1d244002fc3a2af876ca 501 Gene3D G3DSA:1.20.1720.10 6 251 5.7E-36 T 15-10-2018 AM378_13805 1d9ed6d4adbe1d244002fc3a2af876ca 501 Pfam PF07690 Major Facilitator Superfamily 12 277 1.3E-30 T 15-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM378_13805 1d9ed6d4adbe1d244002fc3a2af876ca 501 SUPERFAMILY SSF103473 3 494 9.94E-59 T 15-10-2018 IPR036259 MFS transporter superfamily AM378_13805 1d9ed6d4adbe1d244002fc3a2af876ca 501 PRINTS PR01036 Tetracycline resistance protein TetB signature 394 413 2.7E-9 T 15-10-2018 AM378_13805 1d9ed6d4adbe1d244002fc3a2af876ca 501 PRINTS PR01036 Tetracycline resistance protein TetB signature 70 92 2.7E-9 T 15-10-2018 AM378_13805 1d9ed6d4adbe1d244002fc3a2af876ca 501 PRINTS PR01036 Tetracycline resistance protein TetB signature 132 156 2.7E-9 T 15-10-2018 AM378_13805 1d9ed6d4adbe1d244002fc3a2af876ca 501 PRINTS PR01036 Tetracycline resistance protein TetB signature 157 181 2.7E-9 T 15-10-2018 AM378_12040 4efe87eff7dfeed7405b91d8b869b985 166 Pfam PF08534 Redoxin 38 149 1.8E-14 T 15-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 AM378_12040 4efe87eff7dfeed7405b91d8b869b985 166 SUPERFAMILY SSF52833 11 155 1.31E-27 T 15-10-2018 IPR036249 Thioredoxin-like superfamily AM378_12040 4efe87eff7dfeed7405b91d8b869b985 166 Gene3D G3DSA:3.40.30.10 25 158 2.8E-25 T 15-10-2018 AM378_07155 a45eb49f7a36902a677c62747c56bb26 641 Pfam PF01841 Transglutaminase-like superfamily 271 344 3.8E-8 T 15-10-2018 IPR002931 Transglutaminase-like AM378_07155 a45eb49f7a36902a677c62747c56bb26 641 Gene3D G3DSA:2.60.40.3140 38 246 4.9E-39 T 15-10-2018 AM378_07155 a45eb49f7a36902a677c62747c56bb26 641 SUPERFAMILY SSF54001 265 371 5.89E-9 T 15-10-2018 IPR038765 Papain-like cysteine peptidase superfamily AM378_07155 a45eb49f7a36902a677c62747c56bb26 641 Gene3D G3DSA:3.10.620.30 252 391 1.8E-32 T 15-10-2018 AM378_07155 a45eb49f7a36902a677c62747c56bb26 641 Pfam PF12969 Domain of Unknown Function with PDB structure (DUF3857) 58 224 1.3E-34 T 15-10-2018 IPR024618 Domain of unknown function DUF3857 AM378_16610 80b766136ade6313041d701c1388579b 182 Pfam PF02470 MlaD protein 39 116 1.1E-20 T 15-10-2018 IPR003399 Mce/MlaD AM378_16610 80b766136ade6313041d701c1388579b 182 TIGRFAM TIGR04430 OM_asym_MlaD: outer membrane lipid asymmetry maintenance protein MlaD 3 152 1.1E-55 T 15-10-2018 IPR030970 Probable phospholipid ABC transporter-binding protein MlaD GO:0015914 AM378_19335 e1d7e5537b5891452ab6c0fc6e60bd70 296 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 28 294 6.0E-85 T 15-10-2018 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 AM378_19335 e1d7e5537b5891452ab6c0fc6e60bd70 296 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 101 289 1.2E-29 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AM378_19335 e1d7e5537b5891452ab6c0fc6e60bd70 296 Gene3D G3DSA:1.10.3720.10 74 293 1.3E-27 T 15-10-2018 IPR035906 MetI-like superfamily AM378_19335 e1d7e5537b5891452ab6c0fc6e60bd70 296 SUPERFAMILY SSF161098 35 285 2.62E-32 T 15-10-2018 IPR035906 MetI-like superfamily AM378_01035 d9cb95cd54a6faa6b3d23b1882f3bf16 405 Gene3D G3DSA:2.40.50.100 2 80 2.6E-22 T 15-10-2018 AM378_01035 d9cb95cd54a6faa6b3d23b1882f3bf16 405 Gene3D G3DSA:3.30.559.10 173 405 1.7E-98 T 15-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 AM378_01035 d9cb95cd54a6faa6b3d23b1882f3bf16 405 Pfam PF00364 Biotin-requiring enzyme 5 77 7.4E-18 T 15-10-2018 IPR000089 Biotin/lipoyl attachment AM378_01035 d9cb95cd54a6faa6b3d23b1882f3bf16 405 SUPERFAMILY SSF47005 107 152 1.57E-11 T 15-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 AM378_01035 d9cb95cd54a6faa6b3d23b1882f3bf16 405 Gene3D G3DSA:4.10.320.10 103 153 6.8E-24 T 15-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 AM378_01035 d9cb95cd54a6faa6b3d23b1882f3bf16 405 SUPERFAMILY SSF51230 2 95 3.14E-24 T 15-10-2018 IPR011053 Single hybrid motif AM378_01035 d9cb95cd54a6faa6b3d23b1882f3bf16 405 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 175 403 3.4E-83 T 15-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 AM378_01035 d9cb95cd54a6faa6b3d23b1882f3bf16 405 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 28 57 - T 15-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 AM378_01035 d9cb95cd54a6faa6b3d23b1882f3bf16 405 TIGRFAM TIGR01347 sucB: dihydrolipoyllysine-residue succinyltransferase, E2 component of oxoglutarate dehydrogenase (succinyl-transferring) complex 4 405 7.0E-191 T 15-10-2018 IPR006255 Dihydrolipoamide succinyltransferase GO:0004149|GO:0006099|GO:0045252 KEGG: 00020+2.3.1.61|KEGG: 00310+2.3.1.61|MetaCyc: PWY-5084|Reactome: R-HSA-389661|Reactome: R-HSA-71064|Reactome: R-HSA-71403 AM378_01035 d9cb95cd54a6faa6b3d23b1882f3bf16 405 SUPERFAMILY SSF52777 175 404 6.23E-90 T 15-10-2018 AM378_01035 d9cb95cd54a6faa6b3d23b1882f3bf16 405 Pfam PF02817 e3 binding domain 114 147 7.5E-12 T 15-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 AM378_16440 8eb39824c46abdaf44d765115edc4d97 133 Pfam PF07332 Putative Actinobacterial Holin-X, holin superfamily III 21 129 1.7E-18 T 15-10-2018 IPR009937 Putative Actinobacterial Holin-X, holin superfamily III AM378_10245 9e155a325bb4310be26b2bc59bfe56c1 70 PRINTS PR00050 Cold shock protein signature 7 22 2.4E-17 T 15-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AM378_10245 9e155a325bb4310be26b2bc59bfe56c1 70 PRINTS PR00050 Cold shock protein signature 43 61 2.4E-17 T 15-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AM378_10245 9e155a325bb4310be26b2bc59bfe56c1 70 PRINTS PR00050 Cold shock protein signature 28 37 2.4E-17 T 15-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AM378_10245 9e155a325bb4310be26b2bc59bfe56c1 70 Gene3D G3DSA:2.40.50.140 2 70 1.0E-30 T 15-10-2018 AM378_10245 9e155a325bb4310be26b2bc59bfe56c1 70 PIRSF PIRSF002599 1 70 1.4E-26 T 15-10-2018 IPR012156 Cold shock, CspA GO:0003676 AM378_10245 9e155a325bb4310be26b2bc59bfe56c1 70 ProSitePatterns PS00352 'Cold-shock' domain signature. 18 37 - T 15-10-2018 IPR019844 Cold-shock conserved site AM378_10245 9e155a325bb4310be26b2bc59bfe56c1 70 Pfam PF00313 'Cold-shock' DNA-binding domain 6 69 9.9E-33 T 15-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AM378_10245 9e155a325bb4310be26b2bc59bfe56c1 70 SUPERFAMILY SSF50249 2 69 2.1E-25 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold AM378_10245 9e155a325bb4310be26b2bc59bfe56c1 70 SMART SM00357 6 70 1.9E-30 T 15-10-2018 IPR011129 Cold shock domain GO:0003676 AM378_13695 14670cd6e19beac89d7037bd8742d6f1 162 Gene3D G3DSA:3.30.530.20 21 161 2.4E-40 T 15-10-2018 IPR023393 START-like domain superfamily AM378_13695 14670cd6e19beac89d7037bd8742d6f1 162 SUPERFAMILY SSF55961 19 160 4.08E-35 T 15-10-2018 AM378_13695 14670cd6e19beac89d7037bd8742d6f1 162 Pfam PF03364 Polyketide cyclase / dehydrase and lipid transport 28 153 2.9E-32 T 15-10-2018 IPR005031 Coenzyme Q-binding protein COQ10, START domain Reactome: R-HSA-611105 AM378_11780 e316dde9eb54e7fc296b782631a8e386 448 ProSitePatterns PS00644 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 1. 175 190 - T 15-10-2018 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM378_11780 e316dde9eb54e7fc296b782631a8e386 448 Gene3D G3DSA:3.10.20.600 242 334 5.7E-26 T 15-10-2018 AM378_11780 e316dde9eb54e7fc296b782631a8e386 448 Gene3D G3DSA:3.40.50.11540 60 239 3.0E-78 T 15-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM378_11780 e316dde9eb54e7fc296b782631a8e386 448 Pfam PF10531 SLBB domain 254 296 2.2E-7 T 15-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM378_11780 e316dde9eb54e7fc296b782631a8e386 448 SMART SM00928 337 382 2.7E-21 T 15-10-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM378_11780 e316dde9eb54e7fc296b782631a8e386 448 SUPERFAMILY SSF142019 17 247 3.4E-85 T 15-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM378_11780 e316dde9eb54e7fc296b782631a8e386 448 Pfam PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region 340 422 1.3E-26 T 15-10-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM378_11780 e316dde9eb54e7fc296b782631a8e386 448 SUPERFAMILY SSF140490 335 424 1.01E-30 T 15-10-2018 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM378_11780 e316dde9eb54e7fc296b782631a8e386 448 ProSitePatterns PS00645 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 2. 350 361 - T 15-10-2018 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM378_11780 e316dde9eb54e7fc296b782631a8e386 448 Gene3D G3DSA:1.20.1440.230 335 435 1.3E-27 T 15-10-2018 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM378_11780 e316dde9eb54e7fc296b782631a8e386 448 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 55 227 1.8E-50 T 15-10-2018 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM378_11780 e316dde9eb54e7fc296b782631a8e386 448 SUPERFAMILY SSF142984 249 331 3.66E-20 T 15-10-2018 AM378_11780 e316dde9eb54e7fc296b782631a8e386 448 TIGRFAM TIGR01959 nuoF_fam: NADH oxidoreductase (quinone), F subunit 14 424 1.7E-200 T 15-10-2018 IPR011537 NADH ubiquinone oxidoreductase, F subunit GO:0010181|GO:0016651|GO:0051287|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM378_15130 761ea345f9e9066d35567e57dd1d8592 496 PIRSF PIRSF000538 1 494 1.5E-97 T 15-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 AM378_15130 761ea345f9e9066d35567e57dd1d8592 496 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 3 249 2.2E-78 T 15-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 AM378_15130 761ea345f9e9066d35567e57dd1d8592 496 Gene3D G3DSA:3.30.420.40 1 240 4.5E-69 T 15-10-2018 AM378_15130 761ea345f9e9066d35567e57dd1d8592 496 SUPERFAMILY SSF53067 3 251 2.04E-61 T 15-10-2018 AM378_15130 761ea345f9e9066d35567e57dd1d8592 496 SUPERFAMILY SSF53067 252 488 1.01E-52 T 15-10-2018 AM378_15130 761ea345f9e9066d35567e57dd1d8592 496 Gene3D G3DSA:3.30.420.40 242 494 1.0E-52 T 15-10-2018 AM378_15130 761ea345f9e9066d35567e57dd1d8592 496 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 259 439 1.4E-22 T 15-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 AM378_15130 761ea345f9e9066d35567e57dd1d8592 496 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 353 373 - T 15-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 AM378_11935 ca6738fa2ee508f3dffee39f2e1f173a 190 Hamap MF_01984 Flavin prenyltransferase UbiX [ubiX]. 2 188 36.83 T 15-10-2018 IPR004507 Flavin prenyltransferase UbiX-like AM378_11935 ca6738fa2ee508f3dffee39f2e1f173a 190 TIGRFAM TIGR00421 ubiX_pad: polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases 3 186 1.6E-70 T 15-10-2018 IPR004507 Flavin prenyltransferase UbiX-like AM378_11935 ca6738fa2ee508f3dffee39f2e1f173a 190 Gene3D G3DSA:3.40.50.1950 2 190 5.6E-77 T 15-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 AM378_11935 ca6738fa2ee508f3dffee39f2e1f173a 190 Pfam PF02441 Flavoprotein 2 165 1.2E-22 T 15-10-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 AM378_11935 ca6738fa2ee508f3dffee39f2e1f173a 190 SUPERFAMILY SSF52507 2 187 2.09E-58 T 15-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 AM378_02970 85e35003595f8a6d83787f84c2a1729b 206 Pfam PF13410 Glutathione S-transferase, C-terminal domain 128 189 4.1E-7 T 15-10-2018 AM378_02970 85e35003595f8a6d83787f84c2a1729b 206 Gene3D G3DSA:1.20.1050.10 84 200 2.9E-41 T 15-10-2018 AM378_02970 85e35003595f8a6d83787f84c2a1729b 206 SUPERFAMILY SSF47616 72 199 2.37E-29 T 15-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily AM378_02970 85e35003595f8a6d83787f84c2a1729b 206 Gene3D G3DSA:3.40.30.10 1 83 1.5E-32 T 15-10-2018 AM378_02970 85e35003595f8a6d83787f84c2a1729b 206 Pfam PF13417 Glutathione S-transferase, N-terminal domain 8 79 4.3E-15 T 15-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AM378_02970 85e35003595f8a6d83787f84c2a1729b 206 SUPERFAMILY SSF52833 1 85 3.19E-23 T 15-10-2018 IPR036249 Thioredoxin-like superfamily AM378_13085 d4051d3235fe502f09bfe046864aad0b 1026 Gene3D G3DSA:1.20.1640.10 503 1005 4.8E-293 T 15-10-2018 AM378_13085 d4051d3235fe502f09bfe046864aad0b 1026 SUPERFAMILY SSF82693 40 135 6.02E-23 T 15-10-2018 AM378_13085 d4051d3235fe502f09bfe046864aad0b 1026 Gene3D G3DSA:3.30.70.1430 557 649 4.8E-293 T 15-10-2018 AM378_13085 d4051d3235fe502f09bfe046864aad0b 1026 Gene3D G3DSA:3.30.70.1320 135 326 4.8E-293 T 15-10-2018 AM378_13085 d4051d3235fe502f09bfe046864aad0b 1026 Hamap MF_01424 Multidrug resistance protein MdtC [mdtC]. 1 1024 27.297 T 15-10-2018 IPR023931 Multidrug resistance protein MdtC AM378_13085 d4051d3235fe502f09bfe046864aad0b 1026 Gene3D G3DSA:3.30.70.1430 40 797 4.8E-293 T 15-10-2018 AM378_13085 d4051d3235fe502f09bfe046864aad0b 1026 PRINTS PR00702 Acriflavin resistance protein family signature 330 353 4.5E-82 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AM378_13085 d4051d3235fe502f09bfe046864aad0b 1026 PRINTS PR00702 Acriflavin resistance protein family signature 357 378 4.5E-82 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AM378_13085 d4051d3235fe502f09bfe046864aad0b 1026 PRINTS PR00702 Acriflavin resistance protein family signature 438 461 4.5E-82 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AM378_13085 d4051d3235fe502f09bfe046864aad0b 1026 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 4.5E-82 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AM378_13085 d4051d3235fe502f09bfe046864aad0b 1026 PRINTS PR00702 Acriflavin resistance protein family signature 385 409 4.5E-82 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AM378_13085 d4051d3235fe502f09bfe046864aad0b 1026 PRINTS PR00702 Acriflavin resistance protein family signature 463 486 4.5E-82 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AM378_13085 d4051d3235fe502f09bfe046864aad0b 1026 PRINTS PR00702 Acriflavin resistance protein family signature 605 619 4.5E-82 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AM378_13085 d4051d3235fe502f09bfe046864aad0b 1026 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 4.5E-82 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AM378_13085 d4051d3235fe502f09bfe046864aad0b 1026 PRINTS PR00702 Acriflavin resistance protein family signature 542 559 4.5E-82 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AM378_13085 d4051d3235fe502f09bfe046864aad0b 1026 SUPERFAMILY SSF82866 290 491 2.75E-47 T 15-10-2018 AM378_13085 d4051d3235fe502f09bfe046864aad0b 1026 SUPERFAMILY SSF82693 665 833 8.37E-6 T 15-10-2018 AM378_13085 d4051d3235fe502f09bfe046864aad0b 1026 Gene3D G3DSA:3.30.2090.10 701 789 4.8E-293 T 15-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AM378_13085 d4051d3235fe502f09bfe046864aad0b 1026 SUPERFAMILY SSF82693 136 324 1.91E-22 T 15-10-2018 AM378_13085 d4051d3235fe502f09bfe046864aad0b 1026 Gene3D G3DSA:3.30.2090.10 179 269 4.8E-293 T 15-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AM378_13085 d4051d3235fe502f09bfe046864aad0b 1026 SUPERFAMILY SSF82714 703 785 2.22E-16 T 15-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AM378_13085 d4051d3235fe502f09bfe046864aad0b 1026 Gene3D G3DSA:1.20.1640.10 10 502 4.8E-293 T 15-10-2018 AM378_13085 d4051d3235fe502f09bfe046864aad0b 1026 Gene3D G3DSA:3.30.70.1440 650 847 4.8E-293 T 15-10-2018 AM378_13085 d4051d3235fe502f09bfe046864aad0b 1026 SUPERFAMILY SSF82866 812 1010 4.58E-42 T 15-10-2018 AM378_13085 d4051d3235fe502f09bfe046864aad0b 1026 Pfam PF00873 AcrB/AcrD/AcrF family 4 1008 0.0 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AM378_13085 d4051d3235fe502f09bfe046864aad0b 1026 SUPERFAMILY SSF82693 555 650 1.05E-16 T 15-10-2018 AM378_13085 d4051d3235fe502f09bfe046864aad0b 1026 SUPERFAMILY SSF82714 183 265 6.28E-16 T 15-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AM378_18380 b6180d682fdeecad0f22dc16b2964366 153 PRINTS PR00332 Histidine triad family signature 4 20 1.1E-7 T 15-10-2018 IPR001310 Histidine triad (HIT) protein AM378_18380 b6180d682fdeecad0f22dc16b2964366 153 PRINTS PR00332 Histidine triad family signature 25 43 1.1E-7 T 15-10-2018 IPR001310 Histidine triad (HIT) protein AM378_18380 b6180d682fdeecad0f22dc16b2964366 153 PRINTS PR00332 Histidine triad family signature 89 99 1.1E-7 T 15-10-2018 IPR001310 Histidine triad (HIT) protein AM378_18380 b6180d682fdeecad0f22dc16b2964366 153 Pfam PF01230 HIT domain 12 99 5.4E-10 T 15-10-2018 IPR001310 Histidine triad (HIT) protein AM378_18380 b6180d682fdeecad0f22dc16b2964366 153 SUPERFAMILY SSF54197 1 149 2.01E-27 T 15-10-2018 IPR036265 HIT-like superfamily AM378_18380 b6180d682fdeecad0f22dc16b2964366 153 Gene3D G3DSA:3.30.428.10 1 152 4.0E-28 T 15-10-2018 IPR036265 HIT-like superfamily AM378_15715 6ae67f2617bda768d1873fd358cb98fe 258 SMART SM00862 22 101 9.4E-11 T 15-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AM378_15715 6ae67f2617bda768d1873fd358cb98fe 258 SUPERFAMILY SSF46894 24 103 4.54E-12 T 15-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AM378_15715 6ae67f2617bda768d1873fd358cb98fe 258 Gene3D G3DSA:1.10.10.10 7 112 2.3E-14 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_15715 6ae67f2617bda768d1873fd358cb98fe 258 Pfam PF00486 Transcriptional regulatory protein, C terminal 30 101 5.8E-12 T 15-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AM378_00265 0675aa3f16d9d44a04b6eb7bfc4d9266 201 Pfam PF13662 Toprim domain 82 172 1.5E-22 T 15-10-2018 IPR006171 TOPRIM domain AM378_00265 0675aa3f16d9d44a04b6eb7bfc4d9266 201 Gene3D G3DSA:3.40.1360.10 77 199 1.0E-39 T 15-10-2018 AM378_00265 0675aa3f16d9d44a04b6eb7bfc4d9266 201 Hamap MF_00017 Recombination protein RecR [recR]. 1 199 103.425 T 15-10-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 AM378_00265 0675aa3f16d9d44a04b6eb7bfc4d9266 201 TIGRFAM TIGR00615 recR: recombination protein RecR 2 197 9.7E-82 T 15-10-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 AM378_00265 0675aa3f16d9d44a04b6eb7bfc4d9266 201 Gene3D G3DSA:1.10.8.420 1 53 6.7E-19 T 15-10-2018 AM378_00265 0675aa3f16d9d44a04b6eb7bfc4d9266 201 Pfam PF02132 RecR protein 41 77 2.3E-15 T 15-10-2018 IPR023628 Recombination protein RecR, C4-type zinc finger AM378_00265 0675aa3f16d9d44a04b6eb7bfc4d9266 201 SUPERFAMILY SSF111304 2 199 4.32E-71 T 15-10-2018 IPR023627 Recombination protein RecR AM378_00265 0675aa3f16d9d44a04b6eb7bfc4d9266 201 SMART SM00493 81 166 1.5E-19 T 15-10-2018 IPR006171 TOPRIM domain AM378_00265 0675aa3f16d9d44a04b6eb7bfc4d9266 201 ProSitePatterns PS01300 RecR protein signature. 57 78 - T 15-10-2018 IPR015967 Recombination protein RecR, conserved site GO:0006281|GO:0006310 AM378_08870 062c19a699da3d9152a3ca57c80b386a 514 SUPERFAMILY SSF56176 423 505 1.23E-16 T 15-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 AM378_08870 062c19a699da3d9152a3ca57c80b386a 514 Pfam PF00571 CBS domain 363 414 2.3E-6 T 15-10-2018 IPR000644 CBS domain AM378_08870 062c19a699da3d9152a3ca57c80b386a 514 SMART SM00116 366 414 0.019 T 15-10-2018 IPR000644 CBS domain AM378_08870 062c19a699da3d9152a3ca57c80b386a 514 SMART SM00116 304 353 43.0 T 15-10-2018 IPR000644 CBS domain AM378_08870 062c19a699da3d9152a3ca57c80b386a 514 Pfam PF03741 Integral membrane protein TerC family 14 203 4.1E-48 T 15-10-2018 IPR005496 Integral membrane protein TerC GO:0016021 AM378_08870 062c19a699da3d9152a3ca57c80b386a 514 Gene3D G3DSA:3.30.465.10 432 506 1.8E-16 T 15-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 AM378_08870 062c19a699da3d9152a3ca57c80b386a 514 SMART SM01091 426 507 1.9E-21 T 15-10-2018 IPR005170 Transporter-associated domain AM378_08870 062c19a699da3d9152a3ca57c80b386a 514 SUPERFAMILY SSF54631 285 422 2.02E-25 T 15-10-2018 AM378_08870 062c19a699da3d9152a3ca57c80b386a 514 Pfam PF03471 Transporter associated domain 429 506 7.0E-17 T 15-10-2018 IPR005170 Transporter-associated domain AM378_08870 062c19a699da3d9152a3ca57c80b386a 514 Gene3D G3DSA:3.10.580.10 276 431 2.5E-45 T 15-10-2018 AM378_07465 3e78b96fa44950f5bb171044301c67a1 328 TIGRFAM TIGR03558 oxido_grp_1: luciferase family oxidoreductase, group 1 5 322 7.4E-102 T 15-10-2018 IPR019949 Luciferase family oxidoreductase, group 1 AM378_07465 3e78b96fa44950f5bb171044301c67a1 328 Pfam PF00296 Luciferase-like monooxygenase 18 294 1.1E-24 T 15-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 AM378_07465 3e78b96fa44950f5bb171044301c67a1 328 SUPERFAMILY SSF51679 5 323 3.53E-62 T 15-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 AM378_07465 3e78b96fa44950f5bb171044301c67a1 328 Gene3D G3DSA:3.20.20.30 2 326 3.7E-80 T 15-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 AM378_00760 170c8529e77ef8977c947d59f2db431d 292 Gene3D G3DSA:3.10.580.10 51 197 1.0E-55 T 15-10-2018 AM378_00760 170c8529e77ef8977c947d59f2db431d 292 SUPERFAMILY SSF54631 66 202 3.79E-32 T 15-10-2018 AM378_00760 170c8529e77ef8977c947d59f2db431d 292 Gene3D G3DSA:3.30.465.10 198 292 5.0E-34 T 15-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 AM378_00760 170c8529e77ef8977c947d59f2db431d 292 SMART SM00116 78 127 1.4 T 15-10-2018 IPR000644 CBS domain AM378_00760 170c8529e77ef8977c947d59f2db431d 292 SMART SM00116 141 189 3.7 T 15-10-2018 IPR000644 CBS domain AM378_00760 170c8529e77ef8977c947d59f2db431d 292 Pfam PF00571 CBS domain 143 189 1.1E-4 T 15-10-2018 IPR000644 CBS domain AM378_00760 170c8529e77ef8977c947d59f2db431d 292 Pfam PF00571 CBS domain 69 123 1.7E-8 T 15-10-2018 IPR000644 CBS domain AM378_00760 170c8529e77ef8977c947d59f2db431d 292 Pfam PF03471 Transporter associated domain 206 281 4.9E-22 T 15-10-2018 IPR005170 Transporter-associated domain AM378_00760 170c8529e77ef8977c947d59f2db431d 292 SMART SM01091 205 283 2.8E-30 T 15-10-2018 IPR005170 Transporter-associated domain AM378_00760 170c8529e77ef8977c947d59f2db431d 292 SUPERFAMILY SSF56176 203 289 3.54E-24 T 15-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 AM378_24290 1dea30639337815f8eaf5e478ac56a7b 538 PIRSF PIRSF029745 1 538 6.0E-115 T 15-10-2018 IPR027282 Two partner secretion pathway transporter GO:0015031 AM378_24290 1dea30639337815f8eaf5e478ac56a7b 538 Pfam PF08479 POTRA domain, ShlB-type 84 146 2.4E-14 T 15-10-2018 IPR013686 Polypeptide-transport-associated, ShlB-type AM378_24290 1dea30639337815f8eaf5e478ac56a7b 538 Gene3D G3DSA:2.40.160.50 180 538 2.4E-73 T 15-10-2018 AM378_24290 1dea30639337815f8eaf5e478ac56a7b 538 Pfam PF17287 POTRA domain 158 201 3.2E-10 T 15-10-2018 IPR035251 ShlB, POTRA domain AM378_24290 1dea30639337815f8eaf5e478ac56a7b 538 Gene3D G3DSA:3.10.20.310 76 148 6.5E-6 T 15-10-2018 AM378_24290 1dea30639337815f8eaf5e478ac56a7b 538 Pfam PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB 206 501 6.4E-81 T 15-10-2018 IPR005565 Haemolysin activator HlyB, C-terminal AM378_15495 0c546e1d5eafb5696e31e6533158a625 627 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 25 54 - T 15-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 AM378_15495 0c546e1d5eafb5696e31e6533158a625 627 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 227 256 - T 15-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 AM378_15495 0c546e1d5eafb5696e31e6533158a625 627 TIGRFAM TIGR01348 PDHac_trf_long: dihydrolipoyllysine-residue acetyltransferase 195 627 1.3E-226 T 15-10-2018 IPR006256 Dihydrolipoamide acetyltransferase pyruvate dehydrogenase complex GO:0004742|GO:0006096|GO:0045254 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00620+2.3.1.12 AM378_15495 0c546e1d5eafb5696e31e6533158a625 627 Gene3D G3DSA:2.40.50.100 104 182 5.6E-21 T 15-10-2018 AM378_15495 0c546e1d5eafb5696e31e6533158a625 627 Gene3D G3DSA:2.40.50.100 1 80 7.4E-22 T 15-10-2018 AM378_15495 0c546e1d5eafb5696e31e6533158a625 627 Gene3D G3DSA:2.40.50.100 204 282 3.7E-20 T 15-10-2018 AM378_15495 0c546e1d5eafb5696e31e6533158a625 627 Pfam PF00364 Biotin-requiring enzyme 206 275 2.0E-21 T 15-10-2018 IPR000089 Biotin/lipoyl attachment AM378_15495 0c546e1d5eafb5696e31e6533158a625 627 Pfam PF00364 Biotin-requiring enzyme 106 175 1.0E-21 T 15-10-2018 IPR000089 Biotin/lipoyl attachment AM378_15495 0c546e1d5eafb5696e31e6533158a625 627 Pfam PF00364 Biotin-requiring enzyme 4 73 1.3E-21 T 15-10-2018 IPR000089 Biotin/lipoyl attachment AM378_15495 0c546e1d5eafb5696e31e6533158a625 627 Gene3D G3DSA:4.10.320.10 324 369 4.5E-22 T 15-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 AM378_15495 0c546e1d5eafb5696e31e6533158a625 627 SUPERFAMILY SSF51230 204 296 3.01E-23 T 15-10-2018 IPR011053 Single hybrid motif AM378_15495 0c546e1d5eafb5696e31e6533158a625 627 SUPERFAMILY SSF52777 385 626 1.02E-80 T 15-10-2018 AM378_15495 0c546e1d5eafb5696e31e6533158a625 627 Pfam PF02817 e3 binding domain 324 359 5.3E-15 T 15-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 AM378_15495 0c546e1d5eafb5696e31e6533158a625 627 SUPERFAMILY SSF51230 104 196 2.49E-23 T 15-10-2018 IPR011053 Single hybrid motif AM378_15495 0c546e1d5eafb5696e31e6533158a625 627 SUPERFAMILY SSF51230 1 93 7.98E-23 T 15-10-2018 IPR011053 Single hybrid motif AM378_15495 0c546e1d5eafb5696e31e6533158a625 627 Gene3D G3DSA:3.30.559.10 379 627 1.8E-100 T 15-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 AM378_15495 0c546e1d5eafb5696e31e6533158a625 627 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 127 156 - T 15-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 AM378_15495 0c546e1d5eafb5696e31e6533158a625 627 SUPERFAMILY SSF47005 319 363 5.89E-13 T 15-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 AM378_15495 0c546e1d5eafb5696e31e6533158a625 627 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 396 626 6.0E-80 T 15-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 AM378_18220 1c8c5cc6563631b6c73da80fff42f052 321 SUPERFAMILY SSF111369 164 248 9.81E-15 T 15-10-2018 AM378_18220 1c8c5cc6563631b6c73da80fff42f052 321 Gene3D G3DSA:2.40.30.170 209 321 2.6E-35 T 15-10-2018 AM378_18220 1c8c5cc6563631b6c73da80fff42f052 321 SUPERFAMILY SSF111369 98 156 4.84E-6 T 15-10-2018 AM378_18220 1c8c5cc6563631b6c73da80fff42f052 321 Gene3D G3DSA:2.40.50.100 29 61 1.3E-11 T 15-10-2018 AM378_18220 1c8c5cc6563631b6c73da80fff42f052 321 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 25 271 1.7E-17 T 15-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AM378_18220 1c8c5cc6563631b6c73da80fff42f052 321 SUPERFAMILY SSF111369 27 94 1.7E-7 T 15-10-2018 AM378_18220 1c8c5cc6563631b6c73da80fff42f052 321 Pfam PF00529 HlyD membrane-fusion protein of T1SS 5 318 1.9E-8 T 15-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AM378_18220 1c8c5cc6563631b6c73da80fff42f052 321 Gene3D G3DSA:1.10.287.470 62 95 1.3E-11 T 15-10-2018 AM378_18220 1c8c5cc6563631b6c73da80fff42f052 321 Gene3D G3DSA:1.10.287.470 96 162 5.2E-10 T 15-10-2018 AM378_08760 680e319d7266fac1b3396984c9243f9c 576 SMART SM00836 460 576 2.6E-38 T 15-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 AM378_08760 680e319d7266fac1b3396984c9243f9c 576 SMART SM01016 5 87 1.5E-28 T 15-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 AM378_08760 680e319d7266fac1b3396984c9243f9c 576 SUPERFAMILY SSF55190 2 100 1.26E-21 T 15-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 AM378_08760 680e319d7266fac1b3396984c9243f9c 576 Gene3D G3DSA:3.30.1360.70 1 106 3.9E-34 T 15-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 AM378_08760 680e319d7266fac1b3396984c9243f9c 576 Gene3D G3DSA:1.10.730.10 454 576 4.3E-32 T 15-10-2018 AM378_08760 680e319d7266fac1b3396984c9243f9c 576 Hamap MF_00123 Arginine--tRNA ligase [argS]. 5 576 28.749 T 15-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 AM378_08760 680e319d7266fac1b3396984c9243f9c 576 SUPERFAMILY SSF52374 108 454 8.61E-97 T 15-10-2018 AM378_08760 680e319d7266fac1b3396984c9243f9c 576 Pfam PF05746 DALR anticodon binding domain 460 576 6.3E-35 T 15-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 AM378_08760 680e319d7266fac1b3396984c9243f9c 576 SUPERFAMILY SSF47323 454 576 7.85E-35 T 15-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM378_08760 680e319d7266fac1b3396984c9243f9c 576 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 122 133 - T 15-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM378_08760 680e319d7266fac1b3396984c9243f9c 576 Pfam PF03485 Arginyl tRNA synthetase N terminal domain 7 87 5.6E-21 T 15-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 AM378_08760 680e319d7266fac1b3396984c9243f9c 576 TIGRFAM TIGR00456 argS: arginine--tRNA ligase 4 576 4.5E-204 T 15-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 AM378_08760 680e319d7266fac1b3396984c9243f9c 576 PRINTS PR01038 Arginyl-tRNA synthetase signature 114 129 2.4E-26 T 15-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 AM378_08760 680e319d7266fac1b3396984c9243f9c 576 PRINTS PR01038 Arginyl-tRNA synthetase signature 303 324 2.4E-26 T 15-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 AM378_08760 680e319d7266fac1b3396984c9243f9c 576 PRINTS PR01038 Arginyl-tRNA synthetase signature 153 166 2.4E-26 T 15-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 AM378_08760 680e319d7266fac1b3396984c9243f9c 576 PRINTS PR01038 Arginyl-tRNA synthetase signature 129 145 2.4E-26 T 15-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 AM378_08760 680e319d7266fac1b3396984c9243f9c 576 Gene3D G3DSA:3.40.50.620 108 453 1.9E-110 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM378_08760 680e319d7266fac1b3396984c9243f9c 576 Pfam PF00750 tRNA synthetases class I (R) 101 446 1.2E-164 T 15-10-2018 IPR035684 Arginyl-tRNA synthetase, catalytic core domain KEGG: 00970+6.1.1.19 AM378_20090 d2317685c2c2bc58de926503608b27a0 398 Gene3D G3DSA:1.25.40.10 154 394 6.0E-12 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AM378_20090 d2317685c2c2bc58de926503608b27a0 398 TIGRFAM TIGR00540 TPR_hemY_coli: heme biosynthesis-associated TPR protein 3 386 4.0E-126 T 15-10-2018 IPR005254 Heme biosynthesis-associated TPR protein GO:0016020|GO:0042168 AM378_20090 d2317685c2c2bc58de926503608b27a0 398 Pfam PF07219 HemY protein N-terminus 26 132 4.6E-35 T 15-10-2018 IPR010817 HemY, N-terminal AM378_20090 d2317685c2c2bc58de926503608b27a0 398 SUPERFAMILY SSF48452 109 388 3.35E-10 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AM378_07350 0db8342c7cc2b01b7d475dc377e95d92 477 Gene3D G3DSA:3.40.605.10 9 470 6.5E-162 T 15-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 AM378_07350 0db8342c7cc2b01b7d475dc377e95d92 477 SUPERFAMILY SSF53720 2 474 1.31E-157 T 15-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 AM378_07350 0db8342c7cc2b01b7d475dc377e95d92 477 Pfam PF00171 Aldehyde dehydrogenase family 16 472 1.9E-155 T 15-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 AM378_07350 0db8342c7cc2b01b7d475dc377e95d92 477 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 276 287 - T 15-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 AM378_07350 0db8342c7cc2b01b7d475dc377e95d92 477 Gene3D G3DSA:3.40.309.10 253 442 6.5E-162 T 15-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 AM378_03590 d6badc3b02a49c2550e50051d1d8002e 374 SUPERFAMILY SSF56935 22 374 5.49E-87 T 15-10-2018 AM378_03590 d6badc3b02a49c2550e50051d1d8002e 374 Pfam PF00267 Gram-negative porin 27 374 2.1E-150 T 15-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 AM378_03590 d6badc3b02a49c2550e50051d1d8002e 374 PRINTS PR00183 E.coli/Salmonella-type porin signature 236 253 3.4E-72 T 15-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 AM378_03590 d6badc3b02a49c2550e50051d1d8002e 374 PRINTS PR00183 E.coli/Salmonella-type porin signature 22 38 3.4E-72 T 15-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 AM378_03590 d6badc3b02a49c2550e50051d1d8002e 374 PRINTS PR00183 E.coli/Salmonella-type porin signature 279 298 3.4E-72 T 15-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 AM378_03590 d6badc3b02a49c2550e50051d1d8002e 374 PRINTS PR00183 E.coli/Salmonella-type porin signature 151 173 3.4E-72 T 15-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 AM378_03590 d6badc3b02a49c2550e50051d1d8002e 374 PRINTS PR00183 E.coli/Salmonella-type porin signature 51 69 3.4E-72 T 15-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 AM378_03590 d6badc3b02a49c2550e50051d1d8002e 374 PRINTS PR00183 E.coli/Salmonella-type porin signature 96 118 3.4E-72 T 15-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 AM378_03590 d6badc3b02a49c2550e50051d1d8002e 374 ProSitePatterns PS00576 General diffusion Gram-negative porins signature. 326 342 - T 15-10-2018 IPR013793 Porin, Gram-negative type, conserved site AM378_03590 d6badc3b02a49c2550e50051d1d8002e 374 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 96 106 3.2E-16 T 15-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 AM378_03590 d6badc3b02a49c2550e50051d1d8002e 374 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 153 164 3.2E-16 T 15-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 AM378_03590 d6badc3b02a49c2550e50051d1d8002e 374 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 326 343 3.2E-16 T 15-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 AM378_03590 d6badc3b02a49c2550e50051d1d8002e 374 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 52 63 3.2E-16 T 15-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 AM378_03590 d6badc3b02a49c2550e50051d1d8002e 374 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 230 242 3.2E-16 T 15-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 AM378_03590 d6badc3b02a49c2550e50051d1d8002e 374 Gene3D G3DSA:2.40.160.10 22 374 2.3E-157 T 15-10-2018 IPR023614 Porin domain superfamily AM378_08755 8fa2a5969ef8a569a67aca8b17f18720 188 Gene3D G3DSA:3.10.180.10 1 188 1.8E-76 T 15-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AM378_08755 8fa2a5969ef8a569a67aca8b17f18720 188 Pfam PF06185 YecM protein 11 186 2.2E-74 T 15-10-2018 IPR010393 Protein of unknown function DUF991 AM378_08755 8fa2a5969ef8a569a67aca8b17f18720 188 SUPERFAMILY SSF54593 5 187 1.18E-69 T 15-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AM378_18850 831d1da30060750b10dc3f02b4af26e8 82 PRINTS PR00160 Glutaredoxin signature 46 59 6.8E-18 T 15-10-2018 IPR014025 Glutaredoxin subgroup AM378_18850 831d1da30060750b10dc3f02b4af26e8 82 PRINTS PR00160 Glutaredoxin signature 60 73 6.8E-18 T 15-10-2018 IPR014025 Glutaredoxin subgroup AM378_18850 831d1da30060750b10dc3f02b4af26e8 82 PRINTS PR00160 Glutaredoxin signature 4 22 6.8E-18 T 15-10-2018 IPR014025 Glutaredoxin subgroup AM378_18850 831d1da30060750b10dc3f02b4af26e8 82 Gene3D G3DSA:3.40.30.10 1 82 2.8E-27 T 15-10-2018 AM378_18850 831d1da30060750b10dc3f02b4af26e8 82 SUPERFAMILY SSF52833 2 82 2.05E-28 T 15-10-2018 IPR036249 Thioredoxin-like superfamily AM378_18850 831d1da30060750b10dc3f02b4af26e8 82 Pfam PF00462 Glutaredoxin 6 63 4.4E-23 T 15-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 AM378_18850 831d1da30060750b10dc3f02b4af26e8 82 TIGRFAM TIGR02181 GRX_bact: glutaredoxin 3 4 82 1.1E-35 T 15-10-2018 IPR011900 Glutaredoxin, GrxC GO:0045454 AM378_18850 831d1da30060750b10dc3f02b4af26e8 82 ProSitePatterns PS00195 Glutaredoxin active site. 6 22 - T 15-10-2018 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 Reactome: R-HSA-499943 AM378_19350 82eacff7b1637d640cf20080b2d6100b 279 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 59 72 - T 15-10-2018 IPR018313 Solute-binding protein family 3, conserved site AM378_19350 82eacff7b1637d640cf20080b2d6100b 279 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 36 256 6.0E-58 T 15-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AM378_19350 82eacff7b1637d640cf20080b2d6100b 279 SUPERFAMILY SSF53850 1 257 1.36E-66 T 15-10-2018 AM378_19350 82eacff7b1637d640cf20080b2d6100b 279 SMART SM00062 35 258 1.4E-64 T 15-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AM378_19350 82eacff7b1637d640cf20080b2d6100b 279 Gene3D G3DSA:3.40.190.10 123 216 4.2E-63 T 15-10-2018 AM378_19350 82eacff7b1637d640cf20080b2d6100b 279 Gene3D G3DSA:3.40.190.10 27 251 4.2E-63 T 15-10-2018 AM378_12860 99272d728a6a6fe1f09366070cc1d5aa 358 Pfam PF01594 AI-2E family transporter 20 345 1.7E-78 T 15-10-2018 IPR002549 Transmembrane protein TqsA-like AM378_16125 e3fe4632533efa1fca4f9d494891033f 169 Pfam PF04985 Phage tail tube protein FII 4 168 3.5E-68 T 15-10-2018 IPR006498 Tail tube protein AM378_16125 e3fe4632533efa1fca4f9d494891033f 169 TIGRFAM TIGR01611 tail_tube: phage major tail tube protein 3 169 2.7E-54 T 15-10-2018 IPR006498 Tail tube protein AM378_02195 257efe4a1130beea5d2e6cbc920b8178 209 SMART SM00903 26 178 2.7E-15 T 15-10-2018 IPR002563 Flavin reductase like domain GO:0010181 AM378_02195 257efe4a1130beea5d2e6cbc920b8178 209 Pfam PF01613 Flavin reductase like domain 28 176 3.0E-16 T 15-10-2018 IPR002563 Flavin reductase like domain GO:0010181 AM378_02195 257efe4a1130beea5d2e6cbc920b8178 209 SUPERFAMILY SSF50475 5 193 4.12E-49 T 15-10-2018 AM378_02195 257efe4a1130beea5d2e6cbc920b8178 209 Gene3D G3DSA:2.30.110.10 17 209 5.7E-58 T 15-10-2018 IPR012349 FMN-binding split barrel GO:0048037 AM378_06450 4e910458894c80737554d6b36c85d752 249 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 142 170 - T 15-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AM378_06450 4e910458894c80737554d6b36c85d752 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 3.5E-14 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_06450 4e910458894c80737554d6b36c85d752 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 3.5E-14 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_06450 4e910458894c80737554d6b36c85d752 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 3.5E-14 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_06450 4e910458894c80737554d6b36c85d752 249 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 249 1.3E-64 T 15-10-2018 AM378_06450 4e910458894c80737554d6b36c85d752 249 Gene3D G3DSA:3.40.50.720 1 249 9.9E-81 T 15-10-2018 AM378_06450 4e910458894c80737554d6b36c85d752 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 7.0E-47 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_06450 4e910458894c80737554d6b36c85d752 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 7.0E-47 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_06450 4e910458894c80737554d6b36c85d752 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 7.0E-47 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_06450 4e910458894c80737554d6b36c85d752 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 7.0E-47 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_06450 4e910458894c80737554d6b36c85d752 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 212 232 7.0E-47 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_06450 4e910458894c80737554d6b36c85d752 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 7.0E-47 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_06450 4e910458894c80737554d6b36c85d752 249 SUPERFAMILY SSF51735 5 249 1.59E-82 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily AM378_17520 932ab6a0c8856c7aab5f4364f66e334a 274 Pfam PF03947 Ribosomal Proteins L2, C-terminal domain 125 249 7.2E-55 T 15-10-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 AM378_17520 932ab6a0c8856c7aab5f4364f66e334a 274 Gene3D G3DSA:4.10.950.10 196 273 4.1E-36 T 15-10-2018 IPR014726 Ribosomal protein L2, domain 3 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM378_17520 932ab6a0c8856c7aab5f4364f66e334a 274 Gene3D G3DSA:2.30.30.30 115 195 2.0E-33 T 15-10-2018 IPR014722 Ribosomal protein L2, domain 2 AM378_17520 932ab6a0c8856c7aab5f4364f66e334a 274 SUPERFAMILY SSF50104 127 269 2.71E-59 T 15-10-2018 IPR008991 Translation protein SH3-like domain superfamily AM378_17520 932ab6a0c8856c7aab5f4364f66e334a 274 SMART SM01382 124 251 9.7E-89 T 15-10-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 AM378_17520 932ab6a0c8856c7aab5f4364f66e334a 274 SUPERFAMILY SSF50249 2 125 1.1E-50 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold AM378_17520 932ab6a0c8856c7aab5f4364f66e334a 274 PIRSF PIRSF002158 12 274 2.3E-99 T 15-10-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM378_17520 932ab6a0c8856c7aab5f4364f66e334a 274 Pfam PF00181 Ribosomal Proteins L2, RNA binding domain 42 117 3.9E-34 T 15-10-2018 IPR022666 Ribosomal Proteins L2, RNA binding domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM378_17520 932ab6a0c8856c7aab5f4364f66e334a 274 Hamap MF_01320_B 50S ribosomal protein L2 [rplB]. 1 272 47.181 T 15-10-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 AM378_17520 932ab6a0c8856c7aab5f4364f66e334a 274 ProSitePatterns PS00467 Ribosomal protein L2 signature. 218 229 - T 15-10-2018 IPR022671 Ribosomal protein L2, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM378_17520 932ab6a0c8856c7aab5f4364f66e334a 274 TIGRFAM TIGR01171 rplB_bact: ribosomal protein uL2 3 272 2.8E-131 T 15-10-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 AM378_17520 932ab6a0c8856c7aab5f4364f66e334a 274 Gene3D G3DSA:2.40.50.140 1 114 4.6E-51 T 15-10-2018 AM378_17520 932ab6a0c8856c7aab5f4364f66e334a 274 SMART SM01383 42 118 3.6E-48 T 15-10-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM378_13235 6e3a4f2eb1fb3eeb3acf990f621968a0 210 ProSitePatterns PS00622 LuxR-type HTH domain signature. 162 189 - T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM378_13235 6e3a4f2eb1fb3eeb3acf990f621968a0 210 SMART SM00421 145 202 3.1E-19 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM378_13235 6e3a4f2eb1fb3eeb3acf990f621968a0 210 SMART SM00448 4 118 8.9E-6 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM378_13235 6e3a4f2eb1fb3eeb3acf990f621968a0 210 SUPERFAMILY SSF52172 7 130 9.82E-17 T 15-10-2018 IPR011006 CheY-like superfamily AM378_13235 6e3a4f2eb1fb3eeb3acf990f621968a0 210 Pfam PF00072 Response regulator receiver domain 7 115 1.8E-14 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM378_13235 6e3a4f2eb1fb3eeb3acf990f621968a0 210 Gene3D G3DSA:3.40.50.12740 6 205 4.8E-40 T 15-10-2018 AM378_13235 6e3a4f2eb1fb3eeb3acf990f621968a0 210 SUPERFAMILY SSF46894 145 203 6.12E-19 T 15-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AM378_13235 6e3a4f2eb1fb3eeb3acf990f621968a0 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 162 178 9.0E-13 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM378_13235 6e3a4f2eb1fb3eeb3acf990f621968a0 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 148 162 9.0E-13 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM378_13235 6e3a4f2eb1fb3eeb3acf990f621968a0 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 178 190 9.0E-13 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM378_13235 6e3a4f2eb1fb3eeb3acf990f621968a0 210 Pfam PF00196 Bacterial regulatory proteins, luxR family 147 201 1.1E-19 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM378_04270 508d569e57a06d960a06f35b2e897159 371 Gene3D G3DSA:3.30.9.10 59 313 2.3E-130 T 15-10-2018 AM378_04270 508d569e57a06d960a06f35b2e897159 371 Hamap MF_00515 N-methyl-L-tryptophan oxidase [solA]. 1 371 76.928 T 15-10-2018 IPR023493 N-methyl-L-tryptophan oxidase MTOX GO:0050131|GO:0050660|GO:0055114 AM378_04270 508d569e57a06d960a06f35b2e897159 371 Pfam PF01266 FAD dependent oxidoreductase 4 350 5.2E-46 T 15-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 AM378_04270 508d569e57a06d960a06f35b2e897159 371 SUPERFAMILY SSF51905 2 370 3.56E-44 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AM378_04270 508d569e57a06d960a06f35b2e897159 371 Gene3D G3DSA:3.50.50.60 4 366 2.3E-130 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AM378_04270 508d569e57a06d960a06f35b2e897159 371 SUPERFAMILY SSF54373 214 313 8.24E-20 T 15-10-2018 AM378_17565 6387e21530a73366bd1a731484a1d79b 156 Gene3D G3DSA:1.10.455.10 2 155 2.4E-64 T 15-10-2018 IPR036823 Ribosomal protein S7 domain superfamily AM378_17565 6387e21530a73366bd1a731484a1d79b 156 Hamap MF_00480_B 30S ribosomal protein S7 [rpsG]. 1 156 35.203 T 15-10-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 AM378_17565 6387e21530a73366bd1a731484a1d79b 156 ProSitePatterns PS00052 Ribosomal protein S7 signature. 20 46 - T 15-10-2018 IPR020606 Ribosomal protein S7, conserved site GO:0003723|GO:0003735|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM378_17565 6387e21530a73366bd1a731484a1d79b 156 SUPERFAMILY SSF47973 6 149 3.27E-60 T 15-10-2018 IPR036823 Ribosomal protein S7 domain superfamily AM378_17565 6387e21530a73366bd1a731484a1d79b 156 TIGRFAM TIGR01029 rpsG_bact: ribosomal protein uS7 3 156 5.1E-71 T 15-10-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 AM378_17565 6387e21530a73366bd1a731484a1d79b 156 PIRSF PIRSF002122 3 156 1.7E-63 T 15-10-2018 IPR000235 Ribosomal protein S5/S7 GO:0006412 AM378_17565 6387e21530a73366bd1a731484a1d79b 156 Pfam PF00177 Ribosomal protein S7p/S5e 1 149 1.9E-65 T 15-10-2018 IPR023798 Ribosomal protein S7 domain AM378_15505 889e24f9b290bf222130442f5a0100be 254 Pfam PF07729 FCD domain 99 226 2.7E-18 T 15-10-2018 IPR011711 GntR, C-terminal AM378_15505 889e24f9b290bf222130442f5a0100be 254 SMART SM00895 99 227 7.4E-19 T 15-10-2018 IPR011711 GntR, C-terminal AM378_15505 889e24f9b290bf222130442f5a0100be 254 Pfam PF00392 Bacterial regulatory proteins, gntR family 12 74 2.5E-25 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM378_15505 889e24f9b290bf222130442f5a0100be 254 SUPERFAMILY SSF46785 6 76 1.92E-22 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM378_15505 889e24f9b290bf222130442f5a0100be 254 SMART SM00345 15 74 2.3E-29 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM378_15505 889e24f9b290bf222130442f5a0100be 254 SUPERFAMILY SSF48008 95 235 2.25E-21 T 15-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AM378_15505 889e24f9b290bf222130442f5a0100be 254 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 34 48 2.9E-11 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM378_15505 889e24f9b290bf222130442f5a0100be 254 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 48 64 2.9E-11 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM378_15505 889e24f9b290bf222130442f5a0100be 254 Gene3D G3DSA:1.20.120.530 97 236 5.0E-29 T 15-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AM378_15505 889e24f9b290bf222130442f5a0100be 254 Gene3D G3DSA:1.10.10.10 1 75 2.5E-28 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_03505 b44156a3ebd1477c331fe924a37c0758 326 Pfam PF02606 Tetraacyldisaccharide-1-P 4'-kinase 14 319 1.2E-116 T 15-10-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 AM378_03505 b44156a3ebd1477c331fe924a37c0758 326 Hamap MF_00409 Tetraacyldisaccharide 4'-kinase [lpxK]. 1 325 41.177 T 15-10-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 AM378_03505 b44156a3ebd1477c331fe924a37c0758 326 TIGRFAM TIGR00682 lpxK: tetraacyldisaccharide 4'-kinase 19 322 2.5E-105 T 15-10-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 AM378_03505 b44156a3ebd1477c331fe924a37c0758 326 SUPERFAMILY SSF52540 46 178 4.38E-13 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_18050 778e753267bac2b07cb1a4d13826384e 425 Hamap MF_00624 Glucose-1-phosphate adenylyltransferase [glgC]. 17 423 53.21 T 15-10-2018 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 AM378_18050 778e753267bac2b07cb1a4d13826384e 425 ProSitePatterns PS00808 ADP-glucose pyrophosphorylase signature 1. 26 45 - T 15-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 AM378_18050 778e753267bac2b07cb1a4d13826384e 425 TIGRFAM TIGR02091 glgC: glucose-1-phosphate adenylyltransferase 21 397 1.2E-157 T 15-10-2018 IPR011831 Glucose-1-phosphate adenylyltransferase GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 AM378_18050 778e753267bac2b07cb1a4d13826384e 425 Pfam PF00483 Nucleotidyl transferase 22 291 7.1E-69 T 15-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 AM378_18050 778e753267bac2b07cb1a4d13826384e 425 SUPERFAMILY SSF51161 313 415 1.77E-19 T 15-10-2018 IPR011004 Trimeric LpxA-like superfamily AM378_18050 778e753267bac2b07cb1a4d13826384e 425 Gene3D G3DSA:2.160.10.10 301 425 4.4E-41 T 15-10-2018 AM378_18050 778e753267bac2b07cb1a4d13826384e 425 SUPERFAMILY SSF53448 20 392 1.49E-77 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AM378_18050 778e753267bac2b07cb1a4d13826384e 425 ProSitePatterns PS00809 ADP-glucose pyrophosphorylase signature 2. 113 121 - T 15-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 AM378_18050 778e753267bac2b07cb1a4d13826384e 425 Gene3D G3DSA:3.90.550.10 1 300 3.1E-94 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AM378_06245 1eff99df3e555189baa899e9437079b5 318 Pfam PF16220 Domain of unknown function (DUF4880) 16 56 5.5E-9 T 15-10-2018 IPR032623 FecR, N-terminal AM378_06245 1eff99df3e555189baa899e9437079b5 318 Gene3D G3DSA:2.60.120.1440 104 239 1.3E-13 T 15-10-2018 AM378_06245 1eff99df3e555189baa899e9437079b5 318 Pfam PF04773 FecR protein 114 205 2.9E-15 T 15-10-2018 IPR006860 FecR protein AM378_06245 1eff99df3e555189baa899e9437079b5 318 PIRSF PIRSF018266 4 318 1.3E-84 T 15-10-2018 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component AM378_06380 27e4252bfe1c0f6d3761511add9b1183 425 SUPERFAMILY SSF53448 16 424 3.0E-41 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AM378_06380 27e4252bfe1c0f6d3761511add9b1183 425 Pfam PF12919 TcdA/TcdB catalytic glycosyltransferase domain 21 71 2.5E-9 T 15-10-2018 IPR024770 TcdA/TcdB toxin, catalytic glycosyltransferase domain GO:0016757 AM378_06380 27e4252bfe1c0f6d3761511add9b1183 425 Pfam PF12919 TcdA/TcdB catalytic glycosyltransferase domain 155 330 1.1E-17 T 15-10-2018 IPR024770 TcdA/TcdB toxin, catalytic glycosyltransferase domain GO:0016757 AM378_10355 ac6bf7e17728a2725bff6de9a1f30aec 509 ProSitePatterns PS00067 3-hydroxyacyl-CoA dehydrogenase signature. 187 212 - T 15-10-2018 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 AM378_10355 ac6bf7e17728a2725bff6de9a1f30aec 509 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 190 287 1.5E-28 T 15-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 AM378_10355 ac6bf7e17728a2725bff6de9a1f30aec 509 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 421 500 2.2E-11 T 15-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 AM378_10355 ac6bf7e17728a2725bff6de9a1f30aec 509 Gene3D G3DSA:1.10.1040.50 193 497 2.7E-98 T 15-10-2018 AM378_10355 ac6bf7e17728a2725bff6de9a1f30aec 509 SUPERFAMILY SSF48179 189 291 2.04E-29 T 15-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 AM378_10355 ac6bf7e17728a2725bff6de9a1f30aec 509 SUPERFAMILY SSF48179 418 499 7.99E-15 T 15-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 AM378_10355 ac6bf7e17728a2725bff6de9a1f30aec 509 SUPERFAMILY SSF51735 9 189 2.81E-54 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily AM378_10355 ac6bf7e17728a2725bff6de9a1f30aec 509 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 9 186 4.1E-61 T 15-10-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 AM378_10355 ac6bf7e17728a2725bff6de9a1f30aec 509 Gene3D G3DSA:3.40.50.720 7 192 1.9E-67 T 15-10-2018 AM378_10355 ac6bf7e17728a2725bff6de9a1f30aec 509 Gene3D G3DSA:3.30.750.190 293 416 2.7E-98 T 15-10-2018 AM378_03825 cd1994b02e7073a9fa69c8487210abda 830 Gene3D G3DSA:2.60.40.2610 667 754 8.9E-21 T 15-10-2018 AM378_03825 cd1994b02e7073a9fa69c8487210abda 830 Gene3D G3DSA:2.60.40.2070 761 828 5.2E-7 T 15-10-2018 AM378_03825 cd1994b02e7073a9fa69c8487210abda 830 Pfam PF13953 PapC C-terminal domain 760 815 2.4E-13 T 15-10-2018 IPR025949 PapC-like, C-terminal domain AM378_03825 cd1994b02e7073a9fa69c8487210abda 830 SUPERFAMILY SSF141729 24 137 2.62E-18 T 15-10-2018 IPR037224 PapC, N-terminal domain superfamily GO:0005515 AM378_03825 cd1994b02e7073a9fa69c8487210abda 830 Gene3D G3DSA:2.60.40.3110 252 341 1.9E-33 T 15-10-2018 AM378_03825 cd1994b02e7073a9fa69c8487210abda 830 Pfam PF13954 PapC N-terminal domain 26 164 1.7E-29 T 15-10-2018 IPR025885 PapC, N-terminal domain GO:0005515 AM378_03825 cd1994b02e7073a9fa69c8487210abda 830 Pfam PF00577 Outer membrane usher protein 183 750 5.4E-164 T 15-10-2018 IPR000015 Outer membrane usher protein GO:0009297|GO:0015473|GO:0016020 AM378_03825 cd1994b02e7073a9fa69c8487210abda 830 Gene3D G3DSA:3.10.20.410 24 140 2.5E-16 T 15-10-2018 AM378_24330 8d88e1e4ee80b42e2d08b97fede25b54 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 124 148 2.2E-95 T 15-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM378_24330 8d88e1e4ee80b42e2d08b97fede25b54 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 461 482 2.2E-95 T 15-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM378_24330 8d88e1e4ee80b42e2d08b97fede25b54 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 198 216 2.2E-95 T 15-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM378_24330 8d88e1e4ee80b42e2d08b97fede25b54 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 97 120 2.2E-95 T 15-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM378_24330 8d88e1e4ee80b42e2d08b97fede25b54 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 278 299 2.2E-95 T 15-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM378_24330 8d88e1e4ee80b42e2d08b97fede25b54 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 383 401 2.2E-95 T 15-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM378_24330 8d88e1e4ee80b42e2d08b97fede25b54 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 411 430 2.2E-95 T 15-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM378_24330 8d88e1e4ee80b42e2d08b97fede25b54 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 227 246 2.2E-95 T 15-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM378_24330 8d88e1e4ee80b42e2d08b97fede25b54 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 47 72 2.2E-95 T 15-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM378_24330 8d88e1e4ee80b42e2d08b97fede25b54 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 166 178 2.2E-95 T 15-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM378_24330 8d88e1e4ee80b42e2d08b97fede25b54 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 324 339 2.2E-95 T 15-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM378_24330 8d88e1e4ee80b42e2d08b97fede25b54 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 348 369 2.2E-95 T 15-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM378_24330 8d88e1e4ee80b42e2d08b97fede25b54 663 SUPERFAMILY SSF81442 43 560 4.19E-179 T 15-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM378_24330 8d88e1e4ee80b42e2d08b97fede25b54 663 Gene3D G3DSA:1.20.210.10 30 566 2.9E-189 T 15-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM378_24330 8d88e1e4ee80b42e2d08b97fede25b54 663 TIGRFAM TIGR02843 CyoB: cytochrome o ubiquinol oxidase, subunit I 2 647 0.0 T 15-10-2018 IPR014207 Cytochrome o ubiquinol oxidase, subunit I GO:0016682|GO:0055114 MetaCyc: PWY-7544 AM378_24330 8d88e1e4ee80b42e2d08b97fede25b54 663 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 280 334 - T 15-10-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM378_24330 8d88e1e4ee80b42e2d08b97fede25b54 663 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 56 503 1.3E-134 T 15-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM378_16750 6fdb7a59e45b91b13ff5bf7090a24c59 260 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 206 249 - T 15-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AM378_16750 6fdb7a59e45b91b13ff5bf7090a24c59 260 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 222 237 5.4E-6 T 15-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM378_16750 6fdb7a59e45b91b13ff5bf7090a24c59 260 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 237 253 5.4E-6 T 15-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM378_16750 6fdb7a59e45b91b13ff5bf7090a24c59 260 Gene3D G3DSA:2.60.120.10 11 113 2.4E-7 T 15-10-2018 IPR014710 RmlC-like jelly roll fold AM378_16750 6fdb7a59e45b91b13ff5bf7090a24c59 260 Pfam PF02311 AraC-like ligand binding domain 21 136 5.8E-9 T 15-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 AM378_16750 6fdb7a59e45b91b13ff5bf7090a24c59 260 Gene3D G3DSA:1.10.10.60 155 257 2.1E-18 T 15-10-2018 AM378_16750 6fdb7a59e45b91b13ff5bf7090a24c59 260 SUPERFAMILY SSF51182 12 201 1.96E-16 T 15-10-2018 IPR011051 RmlC-like cupin domain superfamily AM378_16750 6fdb7a59e45b91b13ff5bf7090a24c59 260 SUPERFAMILY SSF46689 211 253 5.02E-8 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AM378_16750 6fdb7a59e45b91b13ff5bf7090a24c59 260 Pfam PF12833 Helix-turn-helix domain 177 253 4.0E-19 T 15-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM378_16750 6fdb7a59e45b91b13ff5bf7090a24c59 260 SMART SM00342 171 253 4.3E-17 T 15-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM378_17020 09b5586a83f70cf1b658a6e1df2c7cec 942 Hamap MF_00205 UvrABC system protein A [uvrA]. 1 940 23.023 T 15-10-2018 IPR004602 UvrABC system subunit A GO:0003677|GO:0006289|GO:0009380|GO:0016887 AM378_17020 09b5586a83f70cf1b658a6e1df2c7cec 942 Gene3D G3DSA:1.10.8.280 287 403 1.3E-246 T 15-10-2018 AM378_17020 09b5586a83f70cf1b658a6e1df2c7cec 942 Gene3D G3DSA:3.40.50.300 6 595 1.3E-246 T 15-10-2018 AM378_17020 09b5586a83f70cf1b658a6e1df2c7cec 942 SUPERFAMILY SSF52540 613 911 2.55E-53 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_17020 09b5586a83f70cf1b658a6e1df2c7cec 942 SUPERFAMILY SSF52540 1 569 3.28E-45 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_17020 09b5586a83f70cf1b658a6e1df2c7cec 942 Gene3D G3DSA:3.40.50.300 613 936 5.2E-140 T 15-10-2018 AM378_17020 09b5586a83f70cf1b658a6e1df2c7cec 942 ProSitePatterns PS00211 ABC transporters family signature. 830 844 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM378_17020 09b5586a83f70cf1b658a6e1df2c7cec 942 Pfam PF00005 ABC transporter 806 860 1.3E-5 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM378_17020 09b5586a83f70cf1b658a6e1df2c7cec 942 Gene3D G3DSA:1.20.1580.10 90 492 1.3E-246 T 15-10-2018 AM378_17020 09b5586a83f70cf1b658a6e1df2c7cec 942 ProSitePatterns PS00211 ABC transporters family signature. 487 501 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM378_17020 09b5586a83f70cf1b658a6e1df2c7cec 942 Gene3D G3DSA:3.30.190.20 130 239 1.3E-246 T 15-10-2018 AM378_17020 09b5586a83f70cf1b658a6e1df2c7cec 942 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 4 925 0.0 T 15-10-2018 IPR004602 UvrABC system subunit A GO:0003677|GO:0006289|GO:0009380|GO:0016887 AM378_17020 09b5586a83f70cf1b658a6e1df2c7cec 942 Gene3D G3DSA:1.20.1580.10 693 830 5.2E-140 T 15-10-2018 AM378_03705 0f35136981e21af91d6a27d4af3bc52e 152 Pfam PF17414 MatP C-terminal ribbon-helix-helix domain 88 147 5.1E-31 T 15-10-2018 IPR035375 MatP, C-terminal ribbon-helix-helix domain AM378_03705 0f35136981e21af91d6a27d4af3bc52e 152 Gene3D G3DSA:1.10.1220.10 98 150 1.1E-33 T 15-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 AM378_03705 0f35136981e21af91d6a27d4af3bc52e 152 Gene3D G3DSA:1.20.1270.380 1 89 1.0E-48 T 15-10-2018 IPR038339 MatP, N-terminal domain superfamily AM378_03705 0f35136981e21af91d6a27d4af3bc52e 152 ProDom PD033720 UPF0268 YCBG DEHYDROGENASE PM0482 PBPRA1775 PLU1774 YPO1433/Y2737/YP0877 VV1664 HI1323 HD0178 1 131 6.0E-62 T 15-10-2018 IPR009390 Macrodomain Ter protein, MatP GO:0043565 AM378_03705 0f35136981e21af91d6a27d4af3bc52e 152 Hamap MF_01073 Macrodomain Ter protein [matP]. 1 148 30.798 T 15-10-2018 IPR009390 Macrodomain Ter protein, MatP GO:0043565 AM378_03705 0f35136981e21af91d6a27d4af3bc52e 152 Pfam PF06303 MatP N-terminal domain 2 85 3.1E-45 T 15-10-2018 IPR035087 MatP, N-terminal AM378_10195 a4e73e1f7318f7e0ca24dc061419a305 899 Gene3D G3DSA:3.40.50.1000 547 676 3.8E-75 T 15-10-2018 IPR023214 HAD superfamily AM378_10195 a4e73e1f7318f7e0ca24dc061419a305 899 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 605 728 2.2E-28 T 15-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 AM378_10195 a4e73e1f7318f7e0ca24dc061419a305 899 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 264 407 8.4E-20 T 15-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 AM378_10195 a4e73e1f7318f7e0ca24dc061419a305 899 Gene3D G3DSA:3.40.1110.10 435 546 3.8E-75 T 15-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 AM378_10195 a4e73e1f7318f7e0ca24dc061419a305 899 SUPERFAMILY SSF56784 367 738 2.12E-36 T 15-10-2018 IPR036412 HAD-like superfamily AM378_10195 a4e73e1f7318f7e0ca24dc061419a305 899 Pfam PF00690 Cation transporter/ATPase, N-terminus 25 90 6.4E-16 T 15-10-2018 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 AM378_10195 a4e73e1f7318f7e0ca24dc061419a305 899 Gene3D G3DSA:3.40.50.1000 366 378 2.1E-84 T 15-10-2018 IPR023214 HAD superfamily AM378_10195 a4e73e1f7318f7e0ca24dc061419a305 899 Gene3D G3DSA:1.20.1110.10 677 813 3.8E-75 T 15-10-2018 AM378_10195 a4e73e1f7318f7e0ca24dc061419a305 899 SMART SM00831 22 95 2.9E-21 T 15-10-2018 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 AM378_10195 a4e73e1f7318f7e0ca24dc061419a305 899 Pfam PF00122 E1-E2 ATPase 142 349 5.8E-39 T 15-10-2018 AM378_10195 a4e73e1f7318f7e0ca24dc061419a305 899 TIGRFAM TIGR01524 ATPase-IIIB_Mg: magnesium-translocating P-type ATPase 23 898 0.0 T 15-10-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 AM378_10195 a4e73e1f7318f7e0ca24dc061419a305 899 PRINTS PR01836 Magnesium-transporting ATPase signature 747 760 2.1E-89 T 15-10-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 AM378_10195 a4e73e1f7318f7e0ca24dc061419a305 899 PRINTS PR01836 Magnesium-transporting ATPase signature 697 712 2.1E-89 T 15-10-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 AM378_10195 a4e73e1f7318f7e0ca24dc061419a305 899 PRINTS PR01836 Magnesium-transporting ATPase signature 802 823 2.1E-89 T 15-10-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 AM378_10195 a4e73e1f7318f7e0ca24dc061419a305 899 PRINTS PR01836 Magnesium-transporting ATPase signature 403 416 2.1E-89 T 15-10-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 AM378_10195 a4e73e1f7318f7e0ca24dc061419a305 899 PRINTS PR01836 Magnesium-transporting ATPase signature 282 298 2.1E-89 T 15-10-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 AM378_10195 a4e73e1f7318f7e0ca24dc061419a305 899 PRINTS PR01836 Magnesium-transporting ATPase signature 299 318 2.1E-89 T 15-10-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 AM378_10195 a4e73e1f7318f7e0ca24dc061419a305 899 PRINTS PR01836 Magnesium-transporting ATPase signature 767 783 2.1E-89 T 15-10-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 AM378_10195 a4e73e1f7318f7e0ca24dc061419a305 899 PRINTS PR01836 Magnesium-transporting ATPase signature 715 726 2.1E-89 T 15-10-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 AM378_10195 a4e73e1f7318f7e0ca24dc061419a305 899 PRINTS PR01836 Magnesium-transporting ATPase signature 852 873 2.1E-89 T 15-10-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 AM378_10195 a4e73e1f7318f7e0ca24dc061419a305 899 Gene3D G3DSA:3.40.1110.10 379 389 2.1E-84 T 15-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 AM378_10195 a4e73e1f7318f7e0ca24dc061419a305 899 SUPERFAMILY SSF81665 24 896 1.31E-102 T 15-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 AM378_10195 a4e73e1f7318f7e0ca24dc061419a305 899 Gene3D G3DSA:1.20.1110.10 73 365 2.1E-84 T 15-10-2018 AM378_10195 a4e73e1f7318f7e0ca24dc061419a305 899 SUPERFAMILY SSF81653 160 269 4.84E-24 T 15-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 AM378_10195 a4e73e1f7318f7e0ca24dc061419a305 899 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 371 377 - T 15-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 AM378_10195 a4e73e1f7318f7e0ca24dc061419a305 899 Gene3D G3DSA:2.70.150.10 39 272 2.1E-84 T 15-10-2018 AM378_10195 a4e73e1f7318f7e0ca24dc061419a305 899 Pfam PF00702 haloacid dehalogenase-like hydrolase 365 653 3.1E-19 T 15-10-2018 AM378_10195 a4e73e1f7318f7e0ca24dc061419a305 899 Pfam PF00689 Cation transporting ATPase, C-terminus 722 890 1.8E-17 T 15-10-2018 IPR006068 Cation-transporting P-type ATPase, C-terminal Reactome: R-HSA-936837 AM378_11675 c546a9c0cebb641501c7b5d2a66e2dfd 478 ProSitePatterns PS00437 Catalase proximal heme-ligand signature. 333 341 - T 15-10-2018 IPR002226 Catalase haem-binding site GO:0020037 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 AM378_11675 c546a9c0cebb641501c7b5d2a66e2dfd 478 SUPERFAMILY SSF56634 4 477 1.31E-210 T 15-10-2018 IPR020835 Catalase superfamily GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 AM378_11675 c546a9c0cebb641501c7b5d2a66e2dfd 478 PIRSF PIRSF038928 1 478 2.7E-220 T 15-10-2018 IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 AM378_11675 c546a9c0cebb641501c7b5d2a66e2dfd 478 PRINTS PR00067 Catalase signature 123 141 4.9E-71 T 15-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 AM378_11675 c546a9c0cebb641501c7b5d2a66e2dfd 478 PRINTS PR00067 Catalase signature 320 346 4.9E-71 T 15-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 AM378_11675 c546a9c0cebb641501c7b5d2a66e2dfd 478 PRINTS PR00067 Catalase signature 288 315 4.9E-71 T 15-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 AM378_11675 c546a9c0cebb641501c7b5d2a66e2dfd 478 PRINTS PR00067 Catalase signature 20 43 4.9E-71 T 15-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 AM378_11675 c546a9c0cebb641501c7b5d2a66e2dfd 478 PRINTS PR00067 Catalase signature 83 101 4.9E-71 T 15-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 AM378_11675 c546a9c0cebb641501c7b5d2a66e2dfd 478 PRINTS PR00067 Catalase signature 104 121 4.9E-71 T 15-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 AM378_11675 c546a9c0cebb641501c7b5d2a66e2dfd 478 Pfam PF00199 Catalase 7 387 1.0E-186 T 15-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 AM378_11675 c546a9c0cebb641501c7b5d2a66e2dfd 478 ProSitePatterns PS00438 Catalase proximal active site signature. 43 59 - T 15-10-2018 IPR024708 Catalase active site GO:0004096 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 AM378_11675 c546a9c0cebb641501c7b5d2a66e2dfd 478 Gene3D G3DSA:2.40.180.10 1 478 5.9E-233 T 15-10-2018 IPR037060 Catalase core domain superfamily GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 AM378_11675 c546a9c0cebb641501c7b5d2a66e2dfd 478 SMART SM01060 7 391 1.6E-280 T 15-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 AM378_11675 c546a9c0cebb641501c7b5d2a66e2dfd 478 Pfam PF06628 Catalase-related immune-responsive 414 475 2.3E-22 T 15-10-2018 IPR010582 Catalase immune-responsive domain KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 AM378_14585 7cba4d03e1b181c08a0bf3ce3e8a887f 302 Pfam PF03466 LysR substrate binding domain 88 291 4.1E-43 T 15-10-2018 IPR005119 LysR, substrate-binding AM378_14585 7cba4d03e1b181c08a0bf3ce3e8a887f 302 Gene3D G3DSA:3.40.190.10 163 262 3.4E-63 T 15-10-2018 AM378_14585 7cba4d03e1b181c08a0bf3ce3e8a887f 302 Gene3D G3DSA:1.10.10.10 3 91 8.0E-23 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_14585 7cba4d03e1b181c08a0bf3ce3e8a887f 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 63 9.5E-16 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_14585 7cba4d03e1b181c08a0bf3ce3e8a887f 302 SUPERFAMILY SSF46785 5 111 3.64E-19 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM378_14585 7cba4d03e1b181c08a0bf3ce3e8a887f 302 SUPERFAMILY SSF53850 88 295 1.12E-45 T 15-10-2018 AM378_14585 7cba4d03e1b181c08a0bf3ce3e8a887f 302 Gene3D G3DSA:3.40.190.10 92 289 3.4E-63 T 15-10-2018 AM378_05530 e0a9aa0ee164d4b36ab9d4f14a96d19c 795 SMART SM00873 212 385 7.2E-97 T 15-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 AM378_05530 e0a9aa0ee164d4b36ab9d4f14a96d19c 795 Pfam PF03483 B3/4 domain 212 385 8.0E-69 T 15-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 AM378_05530 e0a9aa0ee164d4b36ab9d4f14a96d19c 795 SMART SM00896 701 794 3.9E-44 T 15-10-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 AM378_05530 e0a9aa0ee164d4b36ab9d4f14a96d19c 795 SUPERFAMILY SSF46955 404 475 5.95E-21 T 15-10-2018 IPR009061 Putative DNA-binding domain superfamily AM378_05530 e0a9aa0ee164d4b36ab9d4f14a96d19c 795 Pfam PF03147 Ferredoxin-fold anticodon binding domain 701 794 1.1E-28 T 15-10-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 AM378_05530 e0a9aa0ee164d4b36ab9d4f14a96d19c 795 Pfam PF03484 tRNA synthetase B5 domain 406 471 3.6E-21 T 15-10-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 AM378_05530 e0a9aa0ee164d4b36ab9d4f14a96d19c 795 Gene3D G3DSA:3.30.56.10 401 475 1.1E-28 T 15-10-2018 AM378_05530 e0a9aa0ee164d4b36ab9d4f14a96d19c 795 TIGRFAM TIGR00472 pheT_bact: phenylalanine--tRNA ligase, beta subunit 1 794 4.5E-288 T 15-10-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 AM378_05530 e0a9aa0ee164d4b36ab9d4f14a96d19c 795 SMART SM00874 403 471 4.7E-31 T 15-10-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 AM378_05530 e0a9aa0ee164d4b36ab9d4f14a96d19c 795 SUPERFAMILY SSF50249 35 197 1.59E-50 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold AM378_05530 e0a9aa0ee164d4b36ab9d4f14a96d19c 795 Gene3D G3DSA:3.30.70.380 702 795 7.0E-32 T 15-10-2018 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily KEGG: 00970+6.1.1.20 AM378_05530 e0a9aa0ee164d4b36ab9d4f14a96d19c 795 Gene3D G3DSA:3.50.40.10 197 395 6.0E-82 T 15-10-2018 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 KEGG: 00970+6.1.1.20 AM378_05530 e0a9aa0ee164d4b36ab9d4f14a96d19c 795 Gene3D G3DSA:2.40.50.140 39 154 2.8E-74 T 15-10-2018 AM378_05530 e0a9aa0ee164d4b36ab9d4f14a96d19c 795 Gene3D G3DSA:3.30.56.10 7 179 2.8E-74 T 15-10-2018 AM378_05530 e0a9aa0ee164d4b36ab9d4f14a96d19c 795 SUPERFAMILY SSF55681 467 690 2.14E-55 T 15-10-2018 AM378_05530 e0a9aa0ee164d4b36ab9d4f14a96d19c 795 Gene3D G3DSA:3.30.930.10 485 692 7.9E-64 T 15-10-2018 AM378_05530 e0a9aa0ee164d4b36ab9d4f14a96d19c 795 Pfam PF01588 Putative tRNA binding domain 45 145 6.1E-27 T 15-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 AM378_05530 e0a9aa0ee164d4b36ab9d4f14a96d19c 795 Hamap MF_00283 Phenylalanine--tRNA ligase beta subunit [pheT]. 1 788 48.259 T 15-10-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 AM378_05530 e0a9aa0ee164d4b36ab9d4f14a96d19c 795 SUPERFAMILY SSF54991 696 794 3.4E-30 T 15-10-2018 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily KEGG: 00970+6.1.1.20 AM378_05530 e0a9aa0ee164d4b36ab9d4f14a96d19c 795 SUPERFAMILY SSF56037 195 394 2.28E-75 T 15-10-2018 AM378_15845 95ae89f44a75e6be3895cb1571c5c8ab 403 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 202 216 - T 15-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 AM378_15845 95ae89f44a75e6be3895cb1571c5c8ab 403 Gene3D G3DSA:3.40.640.10 1 258 2.1E-67 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AM378_15845 95ae89f44a75e6be3895cb1571c5c8ab 403 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 7 391 6.3E-110 T 15-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 AM378_15845 95ae89f44a75e6be3895cb1571c5c8ab 403 Gene3D G3DSA:3.90.1150.10 259 395 2.3E-42 T 15-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AM378_15845 95ae89f44a75e6be3895cb1571c5c8ab 403 SUPERFAMILY SSF53383 21 393 3.93E-88 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM378_15845 95ae89f44a75e6be3895cb1571c5c8ab 403 PIRSF PIRSF001434 1 395 3.4E-111 T 15-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 AM378_15845 95ae89f44a75e6be3895cb1571c5c8ab 403 TIGRFAM TIGR01324 cysta_beta_ly_B: cystathionine beta-lyase 8 394 2.1E-172 T 15-10-2018 IPR006233 Cystathionine beta-lyase, bacterial GO:0004121|GO:0005737|GO:0006520 KEGG: 00270+4.4.1.8|KEGG: 00450+4.4.1.8 AM378_11310 4c5c43dc4f251cc69ef5dfd8d4fc793b 366 SMART SM00267 201 365 3.1E-7 T 15-10-2018 IPR000160 GGDEF domain AM378_11310 4c5c43dc4f251cc69ef5dfd8d4fc793b 366 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 210 363 2.3E-14 T 15-10-2018 IPR000160 GGDEF domain AM378_11310 4c5c43dc4f251cc69ef5dfd8d4fc793b 366 Pfam PF00990 Diguanylate cyclase, GGDEF domain 213 363 9.2E-19 T 15-10-2018 IPR000160 GGDEF domain AM378_11310 4c5c43dc4f251cc69ef5dfd8d4fc793b 366 SUPERFAMILY SSF55073 217 364 7.85E-19 T 15-10-2018 IPR029787 Nucleotide cyclase AM378_11310 4c5c43dc4f251cc69ef5dfd8d4fc793b 366 Gene3D G3DSA:3.30.70.270 207 366 1.2E-21 T 15-10-2018 AM378_05605 5b17773753e27618e4ef80b7070def1d 243 Pfam PF00563 EAL domain 13 223 7.3E-23 T 15-10-2018 IPR001633 EAL domain AM378_05605 5b17773753e27618e4ef80b7070def1d 243 SMART SM00052 1 229 7.0E-7 T 15-10-2018 IPR001633 EAL domain AM378_05605 5b17773753e27618e4ef80b7070def1d 243 SUPERFAMILY SSF141868 13 223 8.76E-24 T 15-10-2018 IPR035919 EAL domain superfamily AM378_05605 5b17773753e27618e4ef80b7070def1d 243 Gene3D G3DSA:3.20.20.450 1 237 3.7E-47 T 15-10-2018 IPR035919 EAL domain superfamily AM378_03495 bcf97d82523d250f31d17f78fdb113da 756 Pfam PF00753 Metallo-beta-lactamase superfamily 508 688 1.4E-16 T 15-10-2018 IPR001279 Metallo-beta-lactamase AM378_03495 bcf97d82523d250f31d17f78fdb113da 756 TIGRFAM TIGR00361 ComEC_Rec2: DNA internalization-related competence protein ComEC/Rec2 122 720 6.7E-181 T 15-10-2018 IPR004797 Competence protein ComEC/Rec2 GO:0016021|GO:0030420 AM378_03495 bcf97d82523d250f31d17f78fdb113da 756 Gene3D G3DSA:3.60.15.10 499 733 5.7E-49 T 15-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AM378_03495 bcf97d82523d250f31d17f78fdb113da 756 Pfam PF03772 Competence protein 205 474 3.9E-52 T 15-10-2018 IPR004477 ComEC/Rec2-related protein AM378_03495 bcf97d82523d250f31d17f78fdb113da 756 SUPERFAMILY SSF56281 500 744 2.23E-44 T 15-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AM378_03495 bcf97d82523d250f31d17f78fdb113da 756 TIGRFAM TIGR00360 ComEC_N-term: ComEC/Rec2-related protein 226 409 2.2E-39 T 15-10-2018 IPR004477 ComEC/Rec2-related protein AM378_03495 bcf97d82523d250f31d17f78fdb113da 756 Pfam PF13567 Domain of unknown function (DUF4131) 23 172 1.8E-9 T 15-10-2018 IPR025405 Domain of unknown function DUF4131 AM378_03495 bcf97d82523d250f31d17f78fdb113da 756 SMART SM00849 510 691 3.5E-15 T 15-10-2018 IPR001279 Metallo-beta-lactamase AM378_13635 a27b9b032f6dcb12bad46c091ff80e0c 545 Pfam PF00890 FAD binding domain 22 404 7.9E-102 T 15-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 AM378_13635 a27b9b032f6dcb12bad46c091ff80e0c 545 TIGRFAM TIGR00551 nadB: L-aspartate oxidase 21 532 1.5E-223 T 15-10-2018 IPR005288 L-aspartate oxidase GO:0005737|GO:0008734|GO:0009435|GO:0055114 KEGG: 00250+1.4.3.16|KEGG: 00760+1.4.3.16|MetaCyc: PWY-5316|MetaCyc: PWY-7342 AM378_13635 a27b9b032f6dcb12bad46c091ff80e0c 545 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 22 44 7.3E-5 T 15-10-2018 AM378_13635 a27b9b032f6dcb12bad46c091ff80e0c 545 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 382 389 7.3E-5 T 15-10-2018 AM378_13635 a27b9b032f6dcb12bad46c091ff80e0c 545 Gene3D G3DSA:1.20.58.100 437 545 4.4E-45 T 15-10-2018 AM378_13635 a27b9b032f6dcb12bad46c091ff80e0c 545 Pfam PF02910 Fumarate reductase flavoprotein C-term 453 533 1.1E-14 T 15-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AM378_13635 a27b9b032f6dcb12bad46c091ff80e0c 545 SUPERFAMILY SSF56425 250 365 4.04E-41 T 15-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 AM378_13635 a27b9b032f6dcb12bad46c091ff80e0c 545 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 23 42 2.8E-10 T 15-10-2018 AM378_13635 a27b9b032f6dcb12bad46c091ff80e0c 545 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 367 389 2.8E-10 T 15-10-2018 AM378_13635 a27b9b032f6dcb12bad46c091ff80e0c 545 SUPERFAMILY SSF51905 12 459 3.4E-73 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AM378_13635 a27b9b032f6dcb12bad46c091ff80e0c 545 SUPERFAMILY SSF46977 437 539 7.98E-32 T 15-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AM378_13635 a27b9b032f6dcb12bad46c091ff80e0c 545 PIRSF PIRSF000171 352 542 3.8E-13 T 15-10-2018 AM378_13635 a27b9b032f6dcb12bad46c091ff80e0c 545 PIRSF PIRSF000171 12 262 5.7E-20 T 15-10-2018 AM378_13635 a27b9b032f6dcb12bad46c091ff80e0c 545 Gene3D G3DSA:3.50.50.60 22 416 6.4E-153 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AM378_13635 a27b9b032f6dcb12bad46c091ff80e0c 545 Gene3D G3DSA:3.90.700.10 260 370 6.4E-153 T 15-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 AM378_01050 f9bf5e0ba2ee374ef670949a64ca4271 632 PRINTS PR01607 Apyrase family signature 226 249 2.3E-10 T 15-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AM378_01050 f9bf5e0ba2ee374ef670949a64ca4271 632 PRINTS PR01607 Apyrase family signature 199 216 2.3E-10 T 15-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AM378_01050 f9bf5e0ba2ee374ef670949a64ca4271 632 PRINTS PR01607 Apyrase family signature 253 273 2.3E-10 T 15-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AM378_01050 f9bf5e0ba2ee374ef670949a64ca4271 632 PRINTS PR01607 Apyrase family signature 22 40 2.3E-10 T 15-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AM378_01050 f9bf5e0ba2ee374ef670949a64ca4271 632 Gene3D G3DSA:3.60.21.10 16 322 3.4E-77 T 15-10-2018 IPR029052 Metallo-dependent phosphatase-like AM378_01050 f9bf5e0ba2ee374ef670949a64ca4271 632 Pfam PF00149 Calcineurin-like phosphoesterase 25 243 1.1E-12 T 15-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 AM378_01050 f9bf5e0ba2ee374ef670949a64ca4271 632 Gene3D G3DSA:3.90.780.10 329 531 1.2E-28 T 15-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AM378_01050 f9bf5e0ba2ee374ef670949a64ca4271 632 SUPERFAMILY SSF56300 18 315 2.93E-75 T 15-10-2018 AM378_01050 f9bf5e0ba2ee374ef670949a64ca4271 632 Pfam PF02872 5'-nucleotidase, C-terminal domain 338 488 9.9E-21 T 15-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AM378_01050 f9bf5e0ba2ee374ef670949a64ca4271 632 ProSitePatterns PS00786 5'-nucleotidase signature 2. 103 114 - T 15-10-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AM378_01050 f9bf5e0ba2ee374ef670949a64ca4271 632 SUPERFAMILY SSF55816 333 546 1.83E-23 T 15-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AM378_06215 13a5014d8fcefb0d25fa2b411b0b66f4 99 ProDom PD336997 PRECURSOR SIGNAL MEMBRANE OUTER YNFD ESCHERICHIA EXPORTED PP0087 COLI PP0090 3 76 5.0E-25 T 15-10-2018 IPR010595 Protein of unknown function DUF1161 AM378_06215 13a5014d8fcefb0d25fa2b411b0b66f4 99 Pfam PF06649 Protein of unknown function (DUF1161) 23 76 3.1E-27 T 15-10-2018 IPR010595 Protein of unknown function DUF1161 AM378_22855 4c178123084457a876c63997735ac6b1 283 Gene3D G3DSA:3.10.20.310 57 125 3.0E-33 T 15-10-2018 AM378_22855 4c178123084457a876c63997735ac6b1 283 Pfam PF08478 POTRA domain, FtsQ-type 56 125 5.4E-22 T 15-10-2018 IPR013685 POTRA domain, FtsQ-type AM378_22855 4c178123084457a876c63997735ac6b1 283 Hamap MF_00911 Cell division protein FtsQ [ftsQ]. 25 254 25.294 T 15-10-2018 IPR026579 Cell division protein FtsQ GO:0090529 AM378_22855 4c178123084457a876c63997735ac6b1 283 Gene3D G3DSA:3.40.50.11690 126 261 3.5E-45 T 15-10-2018 AM378_22855 4c178123084457a876c63997735ac6b1 283 Pfam PF03799 Cell division protein FtsQ 129 246 9.0E-25 T 15-10-2018 IPR005548 Cell division protein FtsQ/DivIB AM378_20550 0809bf68fa3e5c68726662a2594a5b49 345 Pfam PF01565 FAD binding domain 24 149 1.8E-19 T 15-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 AM378_20550 0809bf68fa3e5c68726662a2594a5b49 345 SUPERFAMILY SSF56194 205 341 1.19E-54 T 15-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 AM378_20550 0809bf68fa3e5c68726662a2594a5b49 345 Gene3D G3DSA:3.90.78.10 222 345 4.1E-49 T 15-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 AM378_20550 0809bf68fa3e5c68726662a2594a5b49 345 Gene3D G3DSA:3.30.465.10 72 221 1.9E-54 T 15-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 AM378_20550 0809bf68fa3e5c68726662a2594a5b49 345 Hamap MF_00037 UDP-N-acetylenolpyruvoylglucosamine reductase [murB]. 1 345 88.118 T 15-10-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 AM378_20550 0809bf68fa3e5c68726662a2594a5b49 345 TIGRFAM TIGR00179 murB: UDP-N-acetylenolpyruvoylglucosamine reductase 8 333 1.8E-108 T 15-10-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 AM378_20550 0809bf68fa3e5c68726662a2594a5b49 345 Pfam PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain 208 332 1.2E-36 T 15-10-2018 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 AM378_20550 0809bf68fa3e5c68726662a2594a5b49 345 SUPERFAMILY SSF56176 7 199 2.45E-40 T 15-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 AM378_20550 0809bf68fa3e5c68726662a2594a5b49 345 Gene3D G3DSA:3.30.43.10 6 71 6.6E-18 T 15-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 AM378_21730 6b38b940d1db2fffc4f0cbfafb46900c 255 Pfam PF08220 DeoR-like helix-turn-helix domain 6 59 2.7E-11 T 15-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AM378_21730 6b38b940d1db2fffc4f0cbfafb46900c 255 SMART SM00420 6 58 3.7E-14 T 15-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AM378_21730 6b38b940d1db2fffc4f0cbfafb46900c 255 Gene3D G3DSA:1.10.10.10 4 60 8.2E-6 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_21730 6b38b940d1db2fffc4f0cbfafb46900c 255 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 9.8E-5 T 15-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AM378_21730 6b38b940d1db2fffc4f0cbfafb46900c 255 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 9.8E-5 T 15-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AM378_21730 6b38b940d1db2fffc4f0cbfafb46900c 255 SUPERFAMILY SSF46785 4 59 2.57E-11 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM378_21730 6b38b940d1db2fffc4f0cbfafb46900c 255 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 15-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 AM378_21730 6b38b940d1db2fffc4f0cbfafb46900c 255 SMART SM01134 73 234 2.0E-73 T 15-10-2018 AM378_21730 6b38b940d1db2fffc4f0cbfafb46900c 255 SUPERFAMILY SSF100950 74 234 4.02E-32 T 15-10-2018 IPR037171 NagB/RpiA transferase-like AM378_21730 6b38b940d1db2fffc4f0cbfafb46900c 255 Pfam PF00455 DeoR C terminal sensor domain 75 232 1.1E-53 T 15-10-2018 IPR014036 DeoR C-terminal sensor domain AM378_11720 eca97961f0c80773b0c054bd0845fda5 327 SMART SM00354 5 72 6.9E-17 T 15-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM378_11720 eca97961f0c80773b0c054bd0845fda5 327 Pfam PF13377 Periplasmic binding protein-like domain 170 326 1.3E-26 T 15-10-2018 AM378_11720 eca97961f0c80773b0c054bd0845fda5 327 Gene3D G3DSA:3.40.50.2300 158 290 2.5E-62 T 15-10-2018 AM378_11720 eca97961f0c80773b0c054bd0845fda5 327 Pfam PF00356 Bacterial regulatory proteins, lacI family 7 48 4.6E-17 T 15-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM378_11720 eca97961f0c80773b0c054bd0845fda5 327 SUPERFAMILY SSF47413 5 49 8.84E-11 T 15-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AM378_11720 eca97961f0c80773b0c054bd0845fda5 327 ProSitePatterns PS00356 LacI-type HTH domain signature. 8 26 - T 15-10-2018 AM378_11720 eca97961f0c80773b0c054bd0845fda5 327 SUPERFAMILY SSF53822 62 321 1.7E-53 T 15-10-2018 IPR028082 Periplasmic binding protein-like I AM378_11720 eca97961f0c80773b0c054bd0845fda5 327 Gene3D G3DSA:1.10.260.40 1 48 5.6E-15 T 15-10-2018 AM378_11720 eca97961f0c80773b0c054bd0845fda5 327 Gene3D G3DSA:3.40.50.2300 64 306 2.5E-62 T 15-10-2018 AM378_06185 3dcc3d473c34d2275faa1cd23765d6e1 433 PRINTS PR00762 Chloride channel signature 116 135 8.7E-25 T 15-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 AM378_06185 3dcc3d473c34d2275faa1cd23765d6e1 433 PRINTS PR00762 Chloride channel signature 383 402 8.7E-25 T 15-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 AM378_06185 3dcc3d473c34d2275faa1cd23765d6e1 433 PRINTS PR00762 Chloride channel signature 330 350 8.7E-25 T 15-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 AM378_06185 3dcc3d473c34d2275faa1cd23765d6e1 433 PRINTS PR00762 Chloride channel signature 365 381 8.7E-25 T 15-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 AM378_06185 3dcc3d473c34d2275faa1cd23765d6e1 433 PRINTS PR00762 Chloride channel signature 166 185 8.7E-25 T 15-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 AM378_06185 3dcc3d473c34d2275faa1cd23765d6e1 433 SUPERFAMILY SSF81340 3 425 6.54E-87 T 15-10-2018 IPR014743 Chloride channel, core Reactome: R-HSA-2672351 AM378_06185 3dcc3d473c34d2275faa1cd23765d6e1 433 Pfam PF00654 Voltage gated chloride channel 78 415 5.9E-75 T 15-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 AM378_06185 3dcc3d473c34d2275faa1cd23765d6e1 433 Gene3D G3DSA:1.10.3080.10 3 429 6.0E-76 T 15-10-2018 IPR014743 Chloride channel, core Reactome: R-HSA-2672351 AM378_18990 e2bbe2f0e57cb951bb546ecdde1a099f 198 ProSitePatterns PS01081 TetR-type HTH domain signature. 28 58 - T 15-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site AM378_18990 e2bbe2f0e57cb951bb546ecdde1a099f 198 Hamap MF_01839 Nucleoid occlusion factor SlmA [slmA]. 1 198 41.411 T 15-10-2018 IPR023769 Nucleoid occlusion factor SlmA GO:0010974 AM378_18990 e2bbe2f0e57cb951bb546ecdde1a099f 198 Gene3D G3DSA:1.10.357.10 9 198 7.3E-75 T 15-10-2018 AM378_18990 e2bbe2f0e57cb951bb546ecdde1a099f 198 SUPERFAMILY SSF48498 86 193 1.42E-6 T 15-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AM378_18990 e2bbe2f0e57cb951bb546ecdde1a099f 198 Pfam PF00440 Bacterial regulatory proteins, tetR family 26 61 2.1E-8 T 15-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM378_18990 e2bbe2f0e57cb951bb546ecdde1a099f 198 SUPERFAMILY SSF46689 7 75 1.05E-11 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AM378_03520 136484c42c8754e4a849a5c50d9563f0 73 SMART SM00357 9 73 9.8E-12 T 15-10-2018 IPR011129 Cold shock domain GO:0003676 AM378_03520 136484c42c8754e4a849a5c50d9563f0 73 Pfam PF00313 'Cold-shock' DNA-binding domain 10 71 3.3E-19 T 15-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AM378_03520 136484c42c8754e4a849a5c50d9563f0 73 PRINTS PR00050 Cold shock protein signature 46 64 1.7E-12 T 15-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AM378_03520 136484c42c8754e4a849a5c50d9563f0 73 PRINTS PR00050 Cold shock protein signature 31 40 1.7E-12 T 15-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AM378_03520 136484c42c8754e4a849a5c50d9563f0 73 PRINTS PR00050 Cold shock protein signature 10 25 1.7E-12 T 15-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AM378_03520 136484c42c8754e4a849a5c50d9563f0 73 PIRSF PIRSF002599 3 73 3.9E-18 T 15-10-2018 IPR012156 Cold shock, CspA GO:0003676 AM378_03520 136484c42c8754e4a849a5c50d9563f0 73 Gene3D G3DSA:2.40.50.140 9 72 5.2E-20 T 15-10-2018 AM378_03520 136484c42c8754e4a849a5c50d9563f0 73 SUPERFAMILY SSF50249 5 71 8.78E-19 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold AM378_10335 dc44ff4c1f2e32db25eb30e68902a3e8 165 Pfam PF01883 Iron-sulfur cluster assembly protein 13 74 2.4E-11 T 15-10-2018 IPR002744 MIP18 family-like AM378_10335 dc44ff4c1f2e32db25eb30e68902a3e8 165 SUPERFAMILY SSF117916 12 104 1.57E-23 T 15-10-2018 IPR034904 Fe-S cluster assembly domain superfamily AM378_10335 dc44ff4c1f2e32db25eb30e68902a3e8 165 TIGRFAM TIGR02159 PA_CoA_Oxy4: phenylacetate-CoA oxygenase, PaaJ subunit 21 165 6.8E-63 T 15-10-2018 IPR011883 Phenylacetate-CoA oxygenase, PaaJ subunit AM378_10335 dc44ff4c1f2e32db25eb30e68902a3e8 165 Gene3D G3DSA:3.30.300.130 9 104 3.0E-24 T 15-10-2018 IPR034904 Fe-S cluster assembly domain superfamily AM378_12855 d4df5d7b18c5c70dfa515b310bcdf8fc 154 SUPERFAMILY SSF52833 1 153 2.48E-49 T 15-10-2018 IPR036249 Thioredoxin-like superfamily AM378_12855 d4df5d7b18c5c70dfa515b310bcdf8fc 154 Gene3D G3DSA:3.40.30.10 4 154 2.1E-49 T 15-10-2018 AM378_12855 d4df5d7b18c5c70dfa515b310bcdf8fc 154 PIRSF PIRSF000239 1 153 2.1E-17 T 15-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 AM378_12855 d4df5d7b18c5c70dfa515b310bcdf8fc 154 Pfam PF00578 AhpC/TSA family 7 134 4.6E-39 T 15-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 AM378_17580 12a7a28a6e233bd3e8499ddb5e6aa314 119 Pfam PF02635 DsrE/DsrF-like family 2 119 1.4E-24 T 15-10-2018 IPR003787 Sulphur relay, DsrE/F-like protein AM378_17580 12a7a28a6e233bd3e8499ddb5e6aa314 119 Gene3D G3DSA:3.40.1260.10 1 119 1.3E-38 T 15-10-2018 IPR027396 DsrEFH-like AM378_17580 12a7a28a6e233bd3e8499ddb5e6aa314 119 Hamap MF_00389 Protein TusC [tusC]. 1 119 37.004 T 15-10-2018 IPR037450 Sulphur relay, TusC AM378_17580 12a7a28a6e233bd3e8499ddb5e6aa314 119 SUPERFAMILY SSF75169 1 119 2.09E-37 T 15-10-2018 IPR027396 DsrEFH-like AM378_17580 12a7a28a6e233bd3e8499ddb5e6aa314 119 TIGRFAM TIGR03010 sulf_tusC_dsrF: sulfur relay protein TusC/DsrF 4 119 3.5E-46 T 15-10-2018 IPR017462 Sulphur relay, TusC/DsrF AM378_08630 9568244b0fa54c8e4eb6ce040404ea6f 491 Gene3D G3DSA:3.40.50.720 12 437 1.7E-168 T 15-10-2018 AM378_08630 9568244b0fa54c8e4eb6ce040404ea6f 491 Gene3D G3DSA:3.30.360.10 176 476 1.7E-168 T 15-10-2018 AM378_08630 9568244b0fa54c8e4eb6ce040404ea6f 491 Hamap MF_00966 Glucose-6-phosphate 1-dehydrogenase [zwf]. 9 489 90.775 T 15-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 AM378_08630 9568244b0fa54c8e4eb6ce040404ea6f 491 SUPERFAMILY SSF55347 176 488 3.6E-113 T 15-10-2018 AM378_08630 9568244b0fa54c8e4eb6ce040404ea6f 491 Pfam PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain 13 186 2.4E-59 T 15-10-2018 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 AM378_08630 9568244b0fa54c8e4eb6ce040404ea6f 491 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 236 252 5.9E-47 T 15-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 AM378_08630 9568244b0fa54c8e4eb6ce040404ea6f 491 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 166 194 5.9E-47 T 15-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 AM378_08630 9568244b0fa54c8e4eb6ce040404ea6f 491 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 218 235 5.9E-47 T 15-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 AM378_08630 9568244b0fa54c8e4eb6ce040404ea6f 491 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 327 353 5.9E-47 T 15-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 AM378_08630 9568244b0fa54c8e4eb6ce040404ea6f 491 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 142 155 5.9E-47 T 15-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 AM378_08630 9568244b0fa54c8e4eb6ce040404ea6f 491 ProSitePatterns PS00069 Glucose-6-phosphate dehydrogenase active site. 176 182 - T 15-10-2018 IPR019796 Glucose-6-phosphate dehydrogenase, active site GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 AM378_08630 9568244b0fa54c8e4eb6ce040404ea6f 491 TIGRFAM TIGR00871 zwf: glucose-6-phosphate dehydrogenase 9 489 5.2E-200 T 15-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 AM378_08630 9568244b0fa54c8e4eb6ce040404ea6f 491 PIRSF PIRSF000110 1 491 3.5E-183 T 15-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 AM378_08630 9568244b0fa54c8e4eb6ce040404ea6f 491 Pfam PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain 188 488 7.4E-116 T 15-10-2018 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 AM378_08630 9568244b0fa54c8e4eb6ce040404ea6f 491 SUPERFAMILY SSF51735 5 189 2.17E-57 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily AM378_07845 b0adad48873f47c23e7598fbeb183ab1 644 Gene3D G3DSA:2.40.50.140 558 644 3.2E-36 T 15-10-2018 AM378_07845 b0adad48873f47c23e7598fbeb183ab1 644 SUPERFAMILY SSF50249 182 556 1.43E-111 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold AM378_07845 b0adad48873f47c23e7598fbeb183ab1 644 ProSitePatterns PS01175 Ribonuclease II family signature. 484 508 - T 15-10-2018 IPR022966 Ribonuclease II/R, conserved site AM378_07845 b0adad48873f47c23e7598fbeb183ab1 644 Pfam PF00773 RNB domain 189 516 1.2E-83 T 15-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 AM378_07845 b0adad48873f47c23e7598fbeb183ab1 644 Pfam PF08206 Ribonuclease B OB domain 24 80 7.5E-18 T 15-10-2018 IPR013223 Ribonuclease B, N-terminal OB domain AM378_07845 b0adad48873f47c23e7598fbeb183ab1 644 SUPERFAMILY SSF50249 560 642 3.47E-20 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold AM378_07845 b0adad48873f47c23e7598fbeb183ab1 644 SUPERFAMILY SSF50249 83 171 4.28E-30 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold AM378_07845 b0adad48873f47c23e7598fbeb183ab1 644 Hamap MF_01036 Exoribonuclease 2 [rnb]. 1 643 44.78 T 15-10-2018 IPR011804 Ribonuclease II GO:0003723|GO:0006401|GO:0008859 AM378_07845 b0adad48873f47c23e7598fbeb183ab1 644 Gene3D G3DSA:2.40.50.640 83 155 2.7E-30 T 15-10-2018 AM378_07845 b0adad48873f47c23e7598fbeb183ab1 644 Gene3D G3DSA:2.40.50.140 1 82 2.7E-30 T 15-10-2018 AM378_07845 b0adad48873f47c23e7598fbeb183ab1 644 SMART SM00955 189 517 3.9E-119 T 15-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 AM378_07845 b0adad48873f47c23e7598fbeb183ab1 644 SMART SM00357 23 79 1.8E-11 T 15-10-2018 IPR011129 Cold shock domain GO:0003676 AM378_07845 b0adad48873f47c23e7598fbeb183ab1 644 TIGRFAM TIGR02062 RNase_B: exoribonuclease II 1 642 0.0 T 15-10-2018 IPR011804 Ribonuclease II GO:0003723|GO:0006401|GO:0008859 AM378_07845 b0adad48873f47c23e7598fbeb183ab1 644 SUPERFAMILY SSF50249 8 80 6.0E-15 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold AM378_07845 b0adad48873f47c23e7598fbeb183ab1 644 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 6 641 1.2E-223 T 15-10-2018 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 AM378_07845 b0adad48873f47c23e7598fbeb183ab1 644 Pfam PF00575 S1 RNA binding domain 559 639 1.3E-9 T 15-10-2018 IPR003029 S1 domain GO:0003676 AM378_06960 8dc91851ce554ace24996c31869279c2 645 Pfam PF04632 Fusaric acid resistance protein family 7 634 1.8E-106 T 15-10-2018 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein GO:0005886|GO:0022857|GO:0055085 AM378_19190 8e46f1fb9fc99b886bf5030f03b2e175 229 Gene3D G3DSA:1.20.120.530 101 227 4.2E-26 T 15-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AM378_19190 8e46f1fb9fc99b886bf5030f03b2e175 229 Pfam PF07729 FCD domain 110 221 5.4E-25 T 15-10-2018 IPR011711 GntR, C-terminal AM378_19190 8e46f1fb9fc99b886bf5030f03b2e175 229 SMART SM00895 106 227 2.5E-21 T 15-10-2018 IPR011711 GntR, C-terminal AM378_19190 8e46f1fb9fc99b886bf5030f03b2e175 229 SUPERFAMILY SSF48008 107 221 3.14E-24 T 15-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AM378_19190 8e46f1fb9fc99b886bf5030f03b2e175 229 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 37 51 6.2E-10 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM378_19190 8e46f1fb9fc99b886bf5030f03b2e175 229 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 51 67 6.2E-10 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM378_19190 8e46f1fb9fc99b886bf5030f03b2e175 229 Pfam PF00392 Bacterial regulatory proteins, gntR family 19 77 1.1E-18 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM378_19190 8e46f1fb9fc99b886bf5030f03b2e175 229 Gene3D G3DSA:1.10.10.10 2 79 4.0E-19 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_19190 8e46f1fb9fc99b886bf5030f03b2e175 229 SMART SM00345 18 77 2.6E-19 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM378_19190 8e46f1fb9fc99b886bf5030f03b2e175 229 SUPERFAMILY SSF46785 10 81 7.37E-20 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM378_15865 0a08640f2b4c79b9c73c31d83c930e96 274 Gene3D G3DSA:3.20.20.100 2 274 1.0E-115 T 15-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily AM378_15865 0a08640f2b4c79b9c73c31d83c930e96 274 ProSitePatterns PS00063 Aldo/keto reductase family putative active site signature. 230 245 - T 15-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 AM378_15865 0a08640f2b4c79b9c73c31d83c930e96 274 SUPERFAMILY SSF51430 3 267 1.02E-85 T 15-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily AM378_15865 0a08640f2b4c79b9c73c31d83c930e96 274 Pfam PF00248 Aldo/keto reductase family 19 261 9.4E-44 T 15-10-2018 IPR023210 NADP-dependent oxidoreductase domain AM378_15865 0a08640f2b4c79b9c73c31d83c930e96 274 ProSitePatterns PS00062 Aldo/keto reductase family signature 2. 124 141 - T 15-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 AM378_15865 0a08640f2b4c79b9c73c31d83c930e96 274 PIRSF PIRSF000097 1 269 2.0E-92 T 15-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AM378_15865 0a08640f2b4c79b9c73c31d83c930e96 274 PRINTS PR00069 Aldo-keto reductase signature 92 110 7.9E-47 T 15-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AM378_15865 0a08640f2b4c79b9c73c31d83c930e96 274 PRINTS PR00069 Aldo-keto reductase signature 197 221 7.9E-47 T 15-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AM378_15865 0a08640f2b4c79b9c73c31d83c930e96 274 PRINTS PR00069 Aldo-keto reductase signature 38 62 7.9E-47 T 15-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AM378_15865 0a08640f2b4c79b9c73c31d83c930e96 274 PRINTS PR00069 Aldo-keto reductase signature 158 187 7.9E-47 T 15-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AM378_15865 0a08640f2b4c79b9c73c31d83c930e96 274 PRINTS PR00069 Aldo-keto reductase signature 124 141 7.9E-47 T 15-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AM378_15865 0a08640f2b4c79b9c73c31d83c930e96 274 ProSitePatterns PS00798 Aldo/keto reductase family signature 1. 42 59 - T 15-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 AM378_19795 0880c4d90c4dafb1050e71ec9c16abae 388 SUPERFAMILY SSF103473 6 378 1.27E-52 T 15-10-2018 IPR036259 MFS transporter superfamily AM378_19795 0880c4d90c4dafb1050e71ec9c16abae 388 Pfam PF07690 Major Facilitator Superfamily 11 324 6.0E-32 T 15-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM378_19795 0880c4d90c4dafb1050e71ec9c16abae 388 Gene3D G3DSA:1.20.1250.20 4 379 1.3E-42 T 15-10-2018 AM378_13375 3f4f1999558bb645ab98c5e8244cd309 616 Gene3D G3DSA:3.30.420.40 23 374 3.2E-113 T 15-10-2018 AM378_13375 3f4f1999558bb645ab98c5e8244cd309 616 SUPERFAMILY SSF53067 20 196 4.53E-52 T 15-10-2018 AM378_13375 3f4f1999558bb645ab98c5e8244cd309 616 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 24 31 - T 15-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 AM378_13375 3f4f1999558bb645ab98c5e8244cd309 616 Gene3D G3DSA:1.20.1270.10 520 615 4.3E-29 T 15-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 AM378_13375 3f4f1999558bb645ab98c5e8244cd309 616 TIGRFAM TIGR01991 HscA: Fe-S protein assembly chaperone HscA 21 615 7.8E-271 T 15-10-2018 IPR010236 ISC system FeS cluster assembly, HscA chaperone GO:0005524|GO:0006457|GO:0016226|GO:0016887|GO:0051082 AM378_13375 3f4f1999558bb645ab98c5e8244cd309 616 SUPERFAMILY SSF100920 384 535 7.19E-50 T 15-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 AM378_13375 3f4f1999558bb645ab98c5e8244cd309 616 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 205 218 - T 15-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 AM378_13375 3f4f1999558bb645ab98c5e8244cd309 616 Pfam PF00012 Hsp70 protein 22 600 1.1E-197 T 15-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AM378_13375 3f4f1999558bb645ab98c5e8244cd309 616 SUPERFAMILY SSF100934 504 615 9.02E-36 T 15-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 AM378_13375 3f4f1999558bb645ab98c5e8244cd309 616 SUPERFAMILY SSF53067 200 377 9.36E-50 T 15-10-2018 AM378_13375 3f4f1999558bb645ab98c5e8244cd309 616 Gene3D G3DSA:3.90.640.10 238 311 3.2E-113 T 15-10-2018 AM378_13375 3f4f1999558bb645ab98c5e8244cd309 616 PRINTS PR00301 70kDa heat shock protein signature 20 33 2.1E-56 T 15-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AM378_13375 3f4f1999558bb645ab98c5e8244cd309 616 PRINTS PR00301 70kDa heat shock protein signature 360 380 2.1E-56 T 15-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AM378_13375 3f4f1999558bb645ab98c5e8244cd309 616 PRINTS PR00301 70kDa heat shock protein signature 466 482 2.1E-56 T 15-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AM378_13375 3f4f1999558bb645ab98c5e8244cd309 616 PRINTS PR00301 70kDa heat shock protein signature 152 172 2.1E-56 T 15-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AM378_13375 3f4f1999558bb645ab98c5e8244cd309 616 PRINTS PR00301 70kDa heat shock protein signature 211 221 2.1E-56 T 15-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AM378_13375 3f4f1999558bb645ab98c5e8244cd309 616 PRINTS PR00301 70kDa heat shock protein signature 329 345 2.1E-56 T 15-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AM378_13375 3f4f1999558bb645ab98c5e8244cd309 616 PRINTS PR00301 70kDa heat shock protein signature 48 60 2.1E-56 T 15-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AM378_13375 3f4f1999558bb645ab98c5e8244cd309 616 PRINTS PR00301 70kDa heat shock protein signature 70 78 2.1E-56 T 15-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AM378_13375 3f4f1999558bb645ab98c5e8244cd309 616 PRINTS PR00301 70kDa heat shock protein signature 385 404 2.1E-56 T 15-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AM378_13375 3f4f1999558bb645ab98c5e8244cd309 616 Gene3D G3DSA:2.60.34.10 389 518 1.2E-49 T 15-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 AM378_13375 3f4f1999558bb645ab98c5e8244cd309 616 Hamap MF_00679 Chaperone protein HscA [hscA]. 1 616 45.736 T 15-10-2018 IPR010236 ISC system FeS cluster assembly, HscA chaperone GO:0005524|GO:0006457|GO:0016226|GO:0016887|GO:0051082 AM378_13375 3f4f1999558bb645ab98c5e8244cd309 616 Gene3D G3DSA:3.30.420.40 194 361 3.2E-113 T 15-10-2018 AM378_08905 9e8bc878fa1a1480e7f2259d9cd9d58c 238 TIGRFAM TIGR00726 TIGR00726: YfiH family protein 39 212 3.3E-42 T 15-10-2018 IPR003730 Multi-copper polyphenol oxidoreductase AM378_08905 9e8bc878fa1a1480e7f2259d9cd9d58c 238 Gene3D G3DSA:3.60.140.10 21 218 9.7E-50 T 15-10-2018 IPR038371 Multi-copper polyphenol oxidoreductase superfamily AM378_08905 9e8bc878fa1a1480e7f2259d9cd9d58c 238 Pfam PF02578 Multi-copper polyphenol oxidoreductase laccase 40 194 5.8E-43 T 15-10-2018 IPR003730 Multi-copper polyphenol oxidoreductase AM378_08905 9e8bc878fa1a1480e7f2259d9cd9d58c 238 SUPERFAMILY SSF64438 32 213 4.94E-47 T 15-10-2018 IPR011324 Cytotoxic necrotizing factor-like, catalytic AM378_13480 234f4ce1b3886704edd30c3253c5f154 487 Gene3D G3DSA:3.40.309.10 258 448 2.5E-169 T 15-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 AM378_13480 234f4ce1b3886704edd30c3253c5f154 487 Gene3D G3DSA:3.40.605.10 30 473 2.5E-169 T 15-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 AM378_13480 234f4ce1b3886704edd30c3253c5f154 487 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 254 261 - T 15-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 AM378_13480 234f4ce1b3886704edd30c3253c5f154 487 Pfam PF00171 Aldehyde dehydrogenase family 29 479 6.9E-156 T 15-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 AM378_13480 234f4ce1b3886704edd30c3253c5f154 487 SUPERFAMILY SSF53720 11 482 5.11E-150 T 15-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 AM378_09470 bd6c19c8337ebf5bf00753bf0b11f497 91 Gene3D G3DSA:1.10.1660.70 1 90 4.0E-38 T 15-10-2018 IPR038147 Cox superfamily AM378_09470 bd6c19c8337ebf5bf00753bf0b11f497 91 Pfam PF10743 Regulatory phage protein cox 4 86 2.1E-34 T 15-10-2018 IPR019679 Regulatory phage protein Cox AM378_24305 f9397b289c935665f5889e45ebcfac57 163 Hamap MF_00632 UPF0234 protein YajQ [yajQ]. 1 163 29.772 T 15-10-2018 IPR007551 Protein of unknown function DUF520 AM378_24305 f9397b289c935665f5889e45ebcfac57 163 SUPERFAMILY SSF89963 2 89 7.19E-31 T 15-10-2018 IPR036183 YajQ-like superfamily AM378_24305 f9397b289c935665f5889e45ebcfac57 163 SUPERFAMILY SSF89963 91 163 1.44E-30 T 15-10-2018 IPR036183 YajQ-like superfamily AM378_24305 f9397b289c935665f5889e45ebcfac57 163 Gene3D G3DSA:3.30.70.860 98 163 9.0E-33 T 15-10-2018 IPR035571 UPF0234-like, C-terminal AM378_24305 f9397b289c935665f5889e45ebcfac57 163 Pfam PF04461 Protein of unknown function (DUF520) 2 162 1.1E-66 T 15-10-2018 IPR007551 Protein of unknown function DUF520 AM378_24305 f9397b289c935665f5889e45ebcfac57 163 Gene3D G3DSA:3.30.70.990 9 97 3.0E-32 T 15-10-2018 IPR035570 UPF0234, N-terminal AM378_18365 f1707e0f576eb34cb835d2b8ba72bd46 199 Gene3D G3DSA:3.40.50.10490 2 197 7.5E-50 T 15-10-2018 AM378_18365 f1707e0f576eb34cb835d2b8ba72bd46 199 Pfam PF01380 SIS domain 38 167 2.4E-21 T 15-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 AM378_18365 f1707e0f576eb34cb835d2b8ba72bd46 199 SUPERFAMILY SSF53697 12 188 1.59E-35 T 15-10-2018 AM378_10575 f1c51339561b8d0c2752d9213a47b014 400 Pfam PF00108 Thiolase, N-terminal domain 5 267 9.6E-73 T 15-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 AM378_10575 f1c51339561b8d0c2752d9213a47b014 400 Gene3D G3DSA:3.40.47.10 6 281 9.2E-151 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 AM378_10575 f1c51339561b8d0c2752d9213a47b014 400 Gene3D G3DSA:3.40.47.10 141 397 9.2E-151 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 AM378_10575 f1c51339561b8d0c2752d9213a47b014 400 ProSitePatterns PS00099 Thiolases active site. 381 394 - T 15-10-2018 IPR020610 Thiolase, active site GO:0016747 AM378_10575 f1c51339561b8d0c2752d9213a47b014 400 SUPERFAMILY SSF53901 4 275 6.81E-75 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 AM378_10575 f1c51339561b8d0c2752d9213a47b014 400 TIGRFAM TIGR02430 pcaF: 3-oxoadipyl-CoA thiolase 3 400 1.5E-211 T 15-10-2018 IPR012793 Beta-ketoadipyl CoA thiolase GO:0016747|GO:0019619 KEGG: 00360+2.3.1.174|KEGG: 00362+2.3.1.174|MetaCyc: PWY-1361|MetaCyc: PWY-2361|MetaCyc: PWY-6185 AM378_10575 f1c51339561b8d0c2752d9213a47b014 400 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 86 104 - T 15-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 AM378_10575 f1c51339561b8d0c2752d9213a47b014 400 Pfam PF02803 Thiolase, C-terminal domain 276 399 9.1E-44 T 15-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 AM378_10575 f1c51339561b8d0c2752d9213a47b014 400 SUPERFAMILY SSF53901 277 399 1.61E-43 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 AM378_10575 f1c51339561b8d0c2752d9213a47b014 400 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 398 4.1E-133 T 15-10-2018 IPR002155 Thiolase GO:0016747 AM378_10575 f1c51339561b8d0c2752d9213a47b014 400 ProSitePatterns PS00737 Thiolases signature 2. 346 362 - T 15-10-2018 IPR020613 Thiolase, conserved site GO:0016747 AM378_10575 f1c51339561b8d0c2752d9213a47b014 400 PIRSF PIRSF000429 1 400 3.4E-125 T 15-10-2018 IPR002155 Thiolase GO:0016747 AM378_22885 6e145335cb812b704a07890a1611fca0 902 PRINTS PR00906 SecA protein signature 117 127 8.0E-74 T 15-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 AM378_22885 6e145335cb812b704a07890a1611fca0 902 PRINTS PR00906 SecA protein signature 63 87 8.0E-74 T 15-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 AM378_22885 6e145335cb812b704a07890a1611fca0 902 PRINTS PR00906 SecA protein signature 101 115 8.0E-74 T 15-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 AM378_22885 6e145335cb812b704a07890a1611fca0 902 PRINTS PR00906 SecA protein signature 413 426 8.0E-74 T 15-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 AM378_22885 6e145335cb812b704a07890a1611fca0 902 PRINTS PR00906 SecA protein signature 170 190 8.0E-74 T 15-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 AM378_22885 6e145335cb812b704a07890a1611fca0 902 PRINTS PR00906 SecA protein signature 339 361 8.0E-74 T 15-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 AM378_22885 6e145335cb812b704a07890a1611fca0 902 PRINTS PR00906 SecA protein signature 376 393 8.0E-74 T 15-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 AM378_22885 6e145335cb812b704a07890a1611fca0 902 SMART SM00958 228 358 4.1E-83 T 15-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 AM378_22885 6e145335cb812b704a07890a1611fca0 902 Hamap MF_01382 Protein translocase subunit SecA [secA]. 5 832 20.01 T 15-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 AM378_22885 6e145335cb812b704a07890a1611fca0 902 Gene3D G3DSA:1.10.3060.10 621 833 2.3E-83 T 15-10-2018 AM378_22885 6e145335cb812b704a07890a1611fca0 902 SUPERFAMILY SSF81886 620 890 9.68E-86 T 15-10-2018 IPR036266 SecA, Wing/Scaffold superfamily AM378_22885 6e145335cb812b704a07890a1611fca0 902 SUPERFAMILY SSF81767 227 368 1.44E-44 T 15-10-2018 IPR036670 SecA, preprotein cross-linking domain superfamily GO:0016020|GO:0017038 AM378_22885 6e145335cb812b704a07890a1611fca0 902 SUPERFAMILY SSF52540 416 618 4.89E-58 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_22885 6e145335cb812b704a07890a1611fca0 902 SMART SM00957 6 402 0.0 T 15-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 AM378_22885 6e145335cb812b704a07890a1611fca0 902 SUPERFAMILY SSF52540 5 415 1.29E-83 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_22885 6e145335cb812b704a07890a1611fca0 902 TIGRFAM TIGR00963 secA: preprotein translocase, SecA subunit 28 817 0.0 T 15-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 AM378_22885 6e145335cb812b704a07890a1611fca0 902 Pfam PF02810 SEC-C motif 882 900 1.1E-10 T 15-10-2018 IPR004027 SEC-C motif AM378_22885 6e145335cb812b704a07890a1611fca0 902 Gene3D G3DSA:3.40.50.300 417 620 6.6E-89 T 15-10-2018 AM378_22885 6e145335cb812b704a07890a1611fca0 902 Pfam PF07516 SecA Wing and Scaffold domain 617 830 7.5E-70 T 15-10-2018 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 AM378_22885 6e145335cb812b704a07890a1611fca0 902 ProSitePatterns PS01312 SecA family signature. 500 515 - T 15-10-2018 IPR020937 SecA conserved site GO:0006605|GO:0006886|GO:0016020 AM378_22885 6e145335cb812b704a07890a1611fca0 902 Gene3D G3DSA:3.40.50.300 22 415 3.8E-176 T 15-10-2018 AM378_22885 6e145335cb812b704a07890a1611fca0 902 Pfam PF07517 SecA DEAD-like domain 7 402 4.6E-132 T 15-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 AM378_22885 6e145335cb812b704a07890a1611fca0 902 Gene3D G3DSA:3.90.1440.10 229 368 3.8E-176 T 15-10-2018 AM378_22885 6e145335cb812b704a07890a1611fca0 902 Pfam PF01043 SecA preprotein cross-linking domain 232 358 2.5E-39 T 15-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 AM378_01425 30e2334ba1663c195d7a9dd388dfa1c1 348 SUPERFAMILY SSF50331 240 344 2.92E-14 T 15-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal AM378_01425 30e2334ba1663c195d7a9dd388dfa1c1 348 SMART SM00382 31 214 2.8E-17 T 15-10-2018 IPR003593 AAA+ ATPase domain AM378_01425 30e2334ba1663c195d7a9dd388dfa1c1 348 Pfam PF08402 TOBE domain 273 342 6.4E-10 T 15-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 AM378_01425 30e2334ba1663c195d7a9dd388dfa1c1 348 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM378_01425 30e2334ba1663c195d7a9dd388dfa1c1 348 Gene3D G3DSA:2.40.50.140 280 336 5.3E-10 T 15-10-2018 AM378_01425 30e2334ba1663c195d7a9dd388dfa1c1 348 Gene3D G3DSA:3.40.50.300 6 224 4.4E-69 T 15-10-2018 AM378_01425 30e2334ba1663c195d7a9dd388dfa1c1 348 Gene3D G3DSA:2.40.50.940 225 338 5.3E-10 T 15-10-2018 AM378_01425 30e2334ba1663c195d7a9dd388dfa1c1 348 Pfam PF00005 ABC transporter 23 164 4.4E-36 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM378_01425 30e2334ba1663c195d7a9dd388dfa1c1 348 SUPERFAMILY SSF52540 7 244 3.86E-85 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_02330 e5c87a758705141afaefcce334090c6b 223 SMART SM00448 1 111 2.6E-37 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM378_02330 e5c87a758705141afaefcce334090c6b 223 SUPERFAMILY SSF52172 1 173 2.72E-38 T 15-10-2018 IPR011006 CheY-like superfamily AM378_02330 e5c87a758705141afaefcce334090c6b 223 Gene3D G3DSA:1.10.10.10 124 223 1.4E-28 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_02330 e5c87a758705141afaefcce334090c6b 223 Pfam PF00072 Response regulator receiver domain 3 111 2.0E-22 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM378_02330 e5c87a758705141afaefcce334090c6b 223 Gene3D G3DSA:3.40.50.2300 1 120 6.9E-36 T 15-10-2018 AM378_02330 e5c87a758705141afaefcce334090c6b 223 TIGRFAM TIGR01387 cztR_silR_copR: heavy metal response regulator 3 218 8.0E-100 T 15-10-2018 IPR006291 Transcriptional regulatory protein PcoR, heavy metal response GO:0003677|GO:0006355 AM378_02330 e5c87a758705141afaefcce334090c6b 223 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 218 4.4E-25 T 15-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AM378_02330 e5c87a758705141afaefcce334090c6b 223 SMART SM00862 144 219 7.4E-23 T 15-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AM378_16725 4dd38f98e3c80f33781946ca3c167888 108 SUPERFAMILY SSF63520 28 106 5.89E-7 T 15-10-2018 IPR036634 PRD domain superfamily GO:0006355 AM378_16725 4dd38f98e3c80f33781946ca3c167888 108 TIGRFAM TIGR03582 EF_0829: PRD domain protein, EF_0829/AHA_3910 family 6 106 2.4E-39 T 15-10-2018 IPR020044 PRD domain protein, EF0829/AHA3910 AM378_16725 4dd38f98e3c80f33781946ca3c167888 108 Gene3D G3DSA:1.10.1790.10 1 107 4.0E-35 T 15-10-2018 AM378_17150 1c20df215ba9b83ca8bc0b930c542c9b 429 ProDom PD008788 PORIN MEMBRANE PRECURSOR SIGNAL MALTOPORIN OUTER ION TRANSMEMBRANE RECEPTOR LAMB 31 424 0.0 T 15-10-2018 IPR003192 Porin, LamB-type GO:0015288|GO:0016020|GO:0034219 AM378_17150 1c20df215ba9b83ca8bc0b930c542c9b 429 Pfam PF02264 LamB porin 27 429 2.0E-145 T 15-10-2018 IPR003192 Porin, LamB-type GO:0015288|GO:0016020|GO:0034219 AM378_17150 1c20df215ba9b83ca8bc0b930c542c9b 429 Gene3D G3DSA:2.40.170.10 25 429 2.4E-169 T 15-10-2018 IPR036998 Porin, LamB-type superfamily GO:0015288|GO:0016020|GO:0034219 AM378_17150 1c20df215ba9b83ca8bc0b930c542c9b 429 Hamap MF_01301 Maltoporin [lamB]. 3 429 42.524 T 15-10-2018 IPR023738 Maltoporin GO:0009279|GO:0015481|GO:0015768|GO:0042956|GO:0042958 AM378_17150 1c20df215ba9b83ca8bc0b930c542c9b 429 SUPERFAMILY SSF56935 25 429 4.58E-147 T 15-10-2018 AM378_08835 feb48c8660e68b1ca6be3bd0a7087cae 392 Gene3D G3DSA:3.30.1490.20 123 196 4.4E-34 T 15-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 AM378_08835 feb48c8660e68b1ca6be3bd0a7087cae 392 TIGRFAM TIGR01142 purT: phosphoribosylglycinamide formyltransferase 2 14 390 6.5E-191 T 15-10-2018 IPR005862 Formate-dependent phosphoribosylglycinamide formyltransferase GO:0000287|GO:0004644|GO:0005524|GO:0009152|GO:0016742 AM378_08835 feb48c8660e68b1ca6be3bd0a7087cae 392 Pfam PF01370 NAD dependent epimerase/dehydratase family 19 81 1.3E-4 T 15-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 AM378_08835 feb48c8660e68b1ca6be3bd0a7087cae 392 Gene3D G3DSA:3.40.50.20 2 122 1.6E-54 T 15-10-2018 AM378_08835 feb48c8660e68b1ca6be3bd0a7087cae 392 Hamap MF_01643 Formate-dependent phosphoribosylglycinamide formyltransferase [purT]. 8 391 52.077 T 15-10-2018 IPR005862 Formate-dependent phosphoribosylglycinamide formyltransferase GO:0000287|GO:0004644|GO:0005524|GO:0009152|GO:0016742 AM378_08835 feb48c8660e68b1ca6be3bd0a7087cae 392 SUPERFAMILY SSF56059 113 314 1.54E-57 T 15-10-2018 AM378_08835 feb48c8660e68b1ca6be3bd0a7087cae 392 Gene3D G3DSA:3.30.470.20 197 390 2.7E-60 T 15-10-2018 AM378_08835 feb48c8660e68b1ca6be3bd0a7087cae 392 Pfam PF02222 ATP-grasp domain 123 295 1.8E-56 T 15-10-2018 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type AM378_08835 feb48c8660e68b1ca6be3bd0a7087cae 392 SUPERFAMILY SSF52440 3 112 1.37E-36 T 15-10-2018 IPR016185 Pre-ATP-grasp domain superfamily AM378_08835 feb48c8660e68b1ca6be3bd0a7087cae 392 SUPERFAMILY SSF51246 319 391 4.08E-18 T 15-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 AM378_11275 f84cd3bcc5456d82aaf0090325e3e866 185 Gene3D G3DSA:2.60.120.10 74 184 6.4E-17 T 15-10-2018 IPR014710 RmlC-like jelly roll fold AM378_11275 f84cd3bcc5456d82aaf0090325e3e866 185 Gene3D G3DSA:1.10.260.40 4 73 1.7E-17 T 15-10-2018 AM378_11275 f84cd3bcc5456d82aaf0090325e3e866 185 SMART SM00530 11 66 4.4E-15 T 15-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM378_11275 f84cd3bcc5456d82aaf0090325e3e866 185 Pfam PF07883 Cupin domain 111 178 6.6E-16 T 15-10-2018 IPR013096 Cupin 2, conserved barrel AM378_11275 f84cd3bcc5456d82aaf0090325e3e866 185 Pfam PF01381 Helix-turn-helix 13 66 1.8E-14 T 15-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM378_11275 f84cd3bcc5456d82aaf0090325e3e866 185 SUPERFAMILY SSF51182 51 183 1.02E-29 T 15-10-2018 IPR011051 RmlC-like cupin domain superfamily AM378_11275 f84cd3bcc5456d82aaf0090325e3e866 185 SUPERFAMILY SSF47413 7 71 2.03E-16 T 15-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AM378_01890 f13f5a99f2c7cb2f1713f233a20790cd 1206 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 152 166 - T 15-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AM378_01890 f13f5a99f2c7cb2f1713f233a20790cd 1206 SMART SM00796 808 1041 5.9E-102 T 15-10-2018 IPR003833 Carboxyltransferase domain, subdomain C and D AM378_01890 f13f5a99f2c7cb2f1713f233a20790cd 1206 SUPERFAMILY SSF50891 632 757 1.29E-32 T 15-10-2018 IPR029000 Cyclophilin-like domain superfamily AM378_01890 f13f5a99f2c7cb2f1713f233a20790cd 1206 Gene3D G3DSA:3.30.470.130 1 445 2.9E-183 T 15-10-2018 AM378_01890 f13f5a99f2c7cb2f1713f233a20790cd 1206 Pfam PF02785 Biotin carboxylase C-terminal domain 336 440 5.2E-36 T 15-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 AM378_01890 f13f5a99f2c7cb2f1713f233a20790cd 1206 SMART SM00878 336 440 2.2E-58 T 15-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 AM378_01890 f13f5a99f2c7cb2f1713f233a20790cd 1206 SUPERFAMILY SSF160467 810 902 1.18E-17 T 15-10-2018 AM378_01890 f13f5a99f2c7cb2f1713f233a20790cd 1206 SUPERFAMILY SSF52440 1 112 3.81E-45 T 15-10-2018 IPR016185 Pre-ATP-grasp domain superfamily AM378_01890 f13f5a99f2c7cb2f1713f233a20790cd 1206 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 1.3E-42 T 15-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 AM378_01890 f13f5a99f2c7cb2f1713f233a20790cd 1206 TIGRFAM TIGR02712 urea_carbox: urea carboxylase 2 1203 0.0 T 15-10-2018 IPR014084 Urea carboxylase KEGG: 00220+3.5.1.54+6.3.4.6|KEGG: 00791+3.5.1.54+6.3.4.6|MetaCyc: PWY-5169|MetaCyc: PWY-5703 AM378_01890 f13f5a99f2c7cb2f1713f233a20790cd 1206 Gene3D G3DSA:3.30.1360.40 793 886 1.5E-28 T 15-10-2018 AM378_01890 f13f5a99f2c7cb2f1713f233a20790cd 1206 TIGRFAM TIGR00724 urea_amlyse_rel: biotin-dependent carboxylase uncharacterized domain 449 775 1.0E-99 T 15-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B AM378_01890 f13f5a99f2c7cb2f1713f233a20790cd 1206 Pfam PF02626 Carboxyltransferase domain, subdomain A and B 472 751 5.3E-89 T 15-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B AM378_01890 f13f5a99f2c7cb2f1713f233a20790cd 1206 SUPERFAMILY SSF56059 83 352 5.83E-68 T 15-10-2018 AM378_01890 f13f5a99f2c7cb2f1713f233a20790cd 1206 Pfam PF00364 Biotin-requiring enzyme 1143 1200 1.5E-15 T 15-10-2018 IPR000089 Biotin/lipoyl attachment AM378_01890 f13f5a99f2c7cb2f1713f233a20790cd 1206 Gene3D G3DSA:2.40.100.10 891 1114 1.0E-94 T 15-10-2018 IPR029000 Cyclophilin-like domain superfamily AM378_01890 f13f5a99f2c7cb2f1713f233a20790cd 1206 SMART SM00797 471 766 2.8E-167 T 15-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B AM378_01890 f13f5a99f2c7cb2f1713f233a20790cd 1206 SUPERFAMILY SSF51246 330 443 3.45E-38 T 15-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 AM378_01890 f13f5a99f2c7cb2f1713f233a20790cd 1206 Pfam PF02682 Carboxyltransferase domain, subdomain C and D 809 1031 3.9E-46 T 15-10-2018 IPR003833 Carboxyltransferase domain, subdomain C and D AM378_01890 f13f5a99f2c7cb2f1713f233a20790cd 1206 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 116 322 6.7E-62 T 15-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AM378_01890 f13f5a99f2c7cb2f1713f233a20790cd 1206 Gene3D G3DSA:2.40.100.10 631 782 8.5E-60 T 15-10-2018 IPR029000 Cyclophilin-like domain superfamily AM378_01890 f13f5a99f2c7cb2f1713f233a20790cd 1206 SUPERFAMILY SSF51230 1132 1203 2.75E-19 T 15-10-2018 IPR011053 Single hybrid motif AM378_01890 f13f5a99f2c7cb2f1713f233a20790cd 1206 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 286 293 - T 15-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AM378_01890 f13f5a99f2c7cb2f1713f233a20790cd 1206 Gene3D G3DSA:2.40.50.100 1137 1205 1.7E-21 T 15-10-2018 AM378_01890 f13f5a99f2c7cb2f1713f233a20790cd 1206 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 1159 1176 - T 15-10-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 AM378_01890 f13f5a99f2c7cb2f1713f233a20790cd 1206 SUPERFAMILY SSF50891 925 1057 9.48E-26 T 15-10-2018 IPR029000 Cyclophilin-like domain superfamily AM378_02175 7ccb83565450b9a676dfc8f22ddc841d 319 Pfam PF00591 Glycosyl transferase family, a/b domain 94 318 2.8E-8 T 15-10-2018 IPR000312 Glycosyl transferase, family 3 GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 AM378_02175 7ccb83565450b9a676dfc8f22ddc841d 319 Pfam PF02885 Glycosyl transferase family, helical bundle domain 5 68 9.5E-10 T 15-10-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 AM378_02175 7ccb83565450b9a676dfc8f22ddc841d 319 Gene3D G3DSA:1.20.970.10 1 71 1.3E-31 T 15-10-2018 AM378_02175 7ccb83565450b9a676dfc8f22ddc841d 319 SUPERFAMILY SSF52418 75 318 4.71E-47 T 15-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 AM378_02175 7ccb83565450b9a676dfc8f22ddc841d 319 Gene3D G3DSA:3.40.1030.10 73 319 5.0E-98 T 15-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 AM378_02175 7ccb83565450b9a676dfc8f22ddc841d 319 SUPERFAMILY SSF47648 7 72 3.27E-14 T 15-10-2018 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 AM378_16070 e0f63aa874b218a4c9d359851efe3e90 71 PRINTS PR00976 Ribosomal protein S21 family signature 13 22 2.8E-17 T 15-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM378_16070 e0f63aa874b218a4c9d359851efe3e90 71 PRINTS PR00976 Ribosomal protein S21 family signature 25 35 2.8E-17 T 15-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM378_16070 e0f63aa874b218a4c9d359851efe3e90 71 PRINTS PR00976 Ribosomal protein S21 family signature 37 47 2.8E-17 T 15-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM378_16070 e0f63aa874b218a4c9d359851efe3e90 71 PRINTS PR00976 Ribosomal protein S21 family signature 5 13 2.8E-17 T 15-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM378_16070 e0f63aa874b218a4c9d359851efe3e90 71 ProSitePatterns PS01181 Ribosomal protein S21 signature. 13 25 - T 15-10-2018 IPR018278 Ribosomal protein S21, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM378_16070 e0f63aa874b218a4c9d359851efe3e90 71 Pfam PF01165 Ribosomal protein S21 4 56 6.3E-22 T 15-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM378_16070 e0f63aa874b218a4c9d359851efe3e90 71 Gene3D G3DSA:1.20.5.1150 16 54 2.1E-21 T 15-10-2018 IPR038380 Ribosomal protein S21 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM378_16070 e0f63aa874b218a4c9d359851efe3e90 71 ProDom PD005521 RIBOSOMAL S21 RIBONUCLEOPROTEIN 30S S21P A SSU SUBUNIT SEQUENCING DIRECT 15 56 1.0E-15 T 15-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM378_16070 e0f63aa874b218a4c9d359851efe3e90 71 TIGRFAM TIGR00030 S21p: ribosomal protein bS21 2 59 4.1E-24 T 15-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM378_16070 e0f63aa874b218a4c9d359851efe3e90 71 Hamap MF_00358 30S ribosomal protein S21 [rpsU]. 1 57 21.283 T 15-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM378_04485 bbf3bcb9a222e2db291ee64af3e90411 118 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 73 88 2.9E-7 T 15-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM378_04485 bbf3bcb9a222e2db291ee64af3e90411 118 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 88 104 2.9E-7 T 15-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM378_04485 bbf3bcb9a222e2db291ee64af3e90411 118 Gene3D G3DSA:1.10.10.60 4 55 4.4E-24 T 15-10-2018 AM378_04485 bbf3bcb9a222e2db291ee64af3e90411 118 SUPERFAMILY SSF46689 58 107 2.37E-12 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AM378_04485 bbf3bcb9a222e2db291ee64af3e90411 118 Pfam PF12833 Helix-turn-helix domain 27 105 1.5E-22 T 15-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM378_04485 bbf3bcb9a222e2db291ee64af3e90411 118 SMART SM00342 21 104 4.2E-29 T 15-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM378_04485 bbf3bcb9a222e2db291ee64af3e90411 118 SUPERFAMILY SSF46689 6 55 4.87E-11 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AM378_04485 bbf3bcb9a222e2db291ee64af3e90411 118 Gene3D G3DSA:1.10.10.60 59 113 1.6E-15 T 15-10-2018 AM378_04485 bbf3bcb9a222e2db291ee64af3e90411 118 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 55 100 - T 15-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AM378_06905 3727706fc0d482db62b83587cb07c5ab 321 Pfam PF01368 DHH family 23 165 4.0E-15 T 15-10-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 AM378_06905 3727706fc0d482db62b83587cb07c5ab 321 Pfam PF02833 DHHA2 domain 203 313 4.8E-13 T 15-10-2018 IPR004097 DHHA2 domain GO:0005737|GO:0016462 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 AM378_06905 3727706fc0d482db62b83587cb07c5ab 321 Gene3D G3DSA:3.90.1640.10 21 208 2.4E-57 T 15-10-2018 AM378_06905 3727706fc0d482db62b83587cb07c5ab 321 SMART SM01131 200 316 1.0E-21 T 15-10-2018 IPR004097 DHHA2 domain GO:0005737|GO:0016462 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 AM378_06905 3727706fc0d482db62b83587cb07c5ab 321 Gene3D G3DSA:3.10.310.20 209 317 5.9E-18 T 15-10-2018 IPR038222 DHHA2 domain superfamily KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 AM378_06905 3727706fc0d482db62b83587cb07c5ab 321 SUPERFAMILY SSF64182 23 312 1.26E-55 T 15-10-2018 IPR038763 DHH phosphoesterase superfamily AM378_13505 9b6a5bbd2c286e9972cc1c938db2aa4f 540 PIRSF PIRSF006630 246 539 1.7E-121 T 15-10-2018 IPR014445 Glutamine-dependent NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.5.1|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 AM378_13505 9b6a5bbd2c286e9972cc1c938db2aa4f 540 PIRSF PIRSF006630 2 252 2.5E-79 T 15-10-2018 IPR014445 Glutamine-dependent NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.5.1|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 AM378_13505 9b6a5bbd2c286e9972cc1c938db2aa4f 540 TIGRFAM TIGR00552 nadE: NAD+ synthetase 265 511 1.1E-58 T 15-10-2018 IPR003694 NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.1.5|Reactome: R-HSA-196807 AM378_13505 9b6a5bbd2c286e9972cc1c938db2aa4f 540 Hamap MF_02090 Glutamine-dependent NAD(+) synthetase [nadE]. 5 537 28.298 T 15-10-2018 IPR014445 Glutamine-dependent NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.5.1|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 AM378_13505 9b6a5bbd2c286e9972cc1c938db2aa4f 540 Pfam PF02540 NAD synthase 264 512 3.3E-71 T 15-10-2018 IPR022310 NAD/GMP synthase AM378_13505 9b6a5bbd2c286e9972cc1c938db2aa4f 540 Pfam PF00795 Carbon-nitrogen hydrolase 7 237 9.9E-26 T 15-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 AM378_13505 9b6a5bbd2c286e9972cc1c938db2aa4f 540 SUPERFAMILY SSF52402 259 520 7.22E-78 T 15-10-2018 AM378_13505 9b6a5bbd2c286e9972cc1c938db2aa4f 540 Gene3D G3DSA:3.40.50.620 261 539 1.2E-112 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM378_13505 9b6a5bbd2c286e9972cc1c938db2aa4f 540 Gene3D G3DSA:3.60.110.10 1 255 1.9E-88 T 15-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily AM378_13505 9b6a5bbd2c286e9972cc1c938db2aa4f 540 SUPERFAMILY SSF56317 4 242 9.55E-63 T 15-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily AM378_13505 9b6a5bbd2c286e9972cc1c938db2aa4f 540 ProSitePatterns PS00920 Nitrilases / cyanide hydratase signature 1. 37 52 - T 15-10-2018 IPR000132 Nitrilase/cyanide hydratase, conserved site GO:0016810 AM378_04760 76c372f4eee231f81c47e06763a6dcbe 198 Pfam PF00196 Bacterial regulatory proteins, luxR family 142 194 3.9E-7 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM378_04760 76c372f4eee231f81c47e06763a6dcbe 198 Gene3D G3DSA:1.10.10.10 105 197 2.3E-10 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_04760 76c372f4eee231f81c47e06763a6dcbe 198 SMART SM00421 138 195 9.2E-6 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM378_04760 76c372f4eee231f81c47e06763a6dcbe 198 SUPERFAMILY SSF46894 133 194 4.42E-10 T 15-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AM378_12905 d2fe33f8cd6e61c5fba6256f745982a8 489 Gene3D G3DSA:1.25.40.10 190 488 8.9E-14 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AM378_12905 d2fe33f8cd6e61c5fba6256f745982a8 489 SUPERFAMILY SSF48452 310 458 3.35E-11 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AM378_12905 d2fe33f8cd6e61c5fba6256f745982a8 489 Gene3D G3DSA:3.30.2010.10 75 152 3.0E-6 T 15-10-2018 AM378_12905 d2fe33f8cd6e61c5fba6256f745982a8 489 Pfam PF01435 Peptidase family M48 74 260 4.9E-28 T 15-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 AM378_12905 d2fe33f8cd6e61c5fba6256f745982a8 489 Pfam PF14559 Tetratricopeptide repeat 355 420 1.2E-10 T 15-10-2018 AM378_12905 d2fe33f8cd6e61c5fba6256f745982a8 489 Hamap MF_00997 Beta-barrel assembly-enhancing protease [bepA]. 5 486 40.38 T 15-10-2018 IPR030873 Beta-barrel assembly-enhancing protease GO:0006508|GO:0008237|GO:0016020|GO:0061077 AM378_02835 97e37f6c8fbd3a5c58a82642e480ee04 177 Pfam PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase 6 174 6.1E-72 T 15-10-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 AM378_02835 97e37f6c8fbd3a5c58a82642e480ee04 177 TIGRFAM TIGR01221 rmlC: dTDP-4-dehydrorhamnose 3,5-epimerase 2 175 1.1E-74 T 15-10-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 AM378_02835 97e37f6c8fbd3a5c58a82642e480ee04 177 ProDom PD001462 35-EPIMERASE DTDP-4-DEHYDRORHAMNOSE ISOMERASE RMLC EPIMERASE RELATED DTDP-6-DEOXY-D-GLUCOSE-35-EPIMERASE DTDP-4-KETO-6-DEOXY-D-GLUCOSE DTDP-4-KETO-6-DEOXYGLUCOSE-35-EPIMERASE DTDP-L-RHAMNOSE 1 175 6.0E-76 T 15-10-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 AM378_02835 97e37f6c8fbd3a5c58a82642e480ee04 177 SUPERFAMILY SSF51182 1 176 2.59E-74 T 15-10-2018 IPR011051 RmlC-like cupin domain superfamily AM378_02835 97e37f6c8fbd3a5c58a82642e480ee04 177 Gene3D G3DSA:2.60.120.10 1 177 1.2E-74 T 15-10-2018 IPR014710 RmlC-like jelly roll fold AM378_02490 3b93b85e837df22ffd067cd432500e8f 243 Gene3D G3DSA:3.40.50.850 33 238 3.4E-39 T 15-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 AM378_02490 3b93b85e837df22ffd067cd432500e8f 243 SUPERFAMILY SSF52499 38 219 5.23E-37 T 15-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 AM378_02490 3b93b85e837df22ffd067cd432500e8f 243 Pfam PF00857 Isochorismatase family 44 194 3.3E-21 T 15-10-2018 IPR000868 Isochorismatase-like GO:0003824 AM378_19325 a1457bf24a9d05c433a9d4459d901fe3 346 SUPERFAMILY SSF53850 29 335 8.8E-96 T 15-10-2018 AM378_19325 a1457bf24a9d05c433a9d4459d901fe3 346 Gene3D G3DSA:3.40.190.10 29 326 2.3E-128 T 15-10-2018 AM378_19325 a1457bf24a9d05c433a9d4459d901fe3 346 Gene3D G3DSA:3.40.190.10 103 278 2.3E-128 T 15-10-2018 AM378_19325 a1457bf24a9d05c433a9d4459d901fe3 346 PIRSF PIRSF002756 2 338 1.4E-105 T 15-10-2018 IPR005673 Phosphate ABC transporter, substrate-binding protein PstS GO:0035435|GO:0042301|GO:0043190 AM378_19325 a1457bf24a9d05c433a9d4459d901fe3 346 Pfam PF12849 PBP superfamily domain 22 307 5.0E-61 T 15-10-2018 IPR024370 PBP domain AM378_19325 a1457bf24a9d05c433a9d4459d901fe3 346 TIGRFAM TIGR00975 3a0107s03: phosphate ABC transporter, phosphate-binding protein PstS 29 335 5.0E-129 T 15-10-2018 IPR005673 Phosphate ABC transporter, substrate-binding protein PstS GO:0035435|GO:0042301|GO:0043190 AM378_07645 daa9d1709a113f0c36e1aef3d9471ae6 330 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 110 297 5.5E-54 T 15-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 AM378_07645 daa9d1709a113f0c36e1aef3d9471ae6 330 SUPERFAMILY SSF51735 102 298 2.61E-55 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily AM378_07645 daa9d1709a113f0c36e1aef3d9471ae6 330 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 147 174 - T 15-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 AM378_07645 daa9d1709a113f0c36e1aef3d9471ae6 330 Gene3D G3DSA:3.40.50.720 102 297 1.7E-139 T 15-10-2018 AM378_07645 daa9d1709a113f0c36e1aef3d9471ae6 330 Gene3D G3DSA:3.40.50.720 2 317 1.7E-139 T 15-10-2018 AM378_07645 daa9d1709a113f0c36e1aef3d9471ae6 330 SUPERFAMILY SSF52283 2 135 4.16E-44 T 15-10-2018 AM378_07645 daa9d1709a113f0c36e1aef3d9471ae6 330 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 223 239 - T 15-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site AM378_07645 daa9d1709a113f0c36e1aef3d9471ae6 330 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 194 216 - T 15-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site AM378_07645 daa9d1709a113f0c36e1aef3d9471ae6 330 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 6 329 7.4E-34 T 15-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 AM378_14020 0ee204b28253c3bfc2fbb7f649af861a 400 SUPERFAMILY SSF54631 275 393 1.01E-13 T 15-10-2018 AM378_14020 0ee204b28253c3bfc2fbb7f649af861a 400 TIGRFAM TIGR01186 proV: glycine betaine/L-proline transport ATP binding subunit 36 394 1.6E-179 T 15-10-2018 IPR005892 Glycine betaine transport ATP-binding subunit GO:0005524|GO:0016020|GO:0031460 AM378_14020 0ee204b28253c3bfc2fbb7f649af861a 400 Gene3D G3DSA:3.10.580.10 285 391 9.2E-9 T 15-10-2018 AM378_14020 0ee204b28253c3bfc2fbb7f649af861a 400 Gene3D G3DSA:3.40.50.300 34 284 4.2E-77 T 15-10-2018 AM378_14020 0ee204b28253c3bfc2fbb7f649af861a 400 Pfam PF00571 CBS domain 347 393 1.0E-4 T 15-10-2018 IPR000644 CBS domain AM378_14020 0ee204b28253c3bfc2fbb7f649af861a 400 ProSitePatterns PS00211 ABC transporters family signature. 165 179 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM378_14020 0ee204b28253c3bfc2fbb7f649af861a 400 SUPERFAMILY SSF52540 43 271 1.08E-74 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_14020 0ee204b28253c3bfc2fbb7f649af861a 400 Pfam PF00005 ABC transporter 45 192 8.2E-34 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM378_14020 0ee204b28253c3bfc2fbb7f649af861a 400 SMART SM00382 53 242 7.0E-20 T 15-10-2018 IPR003593 AAA+ ATPase domain AM378_13485 dc90531247d38005d7cf6344d442662c 307 Pfam PF03466 LysR substrate binding domain 88 295 1.3E-43 T 15-10-2018 IPR005119 LysR, substrate-binding AM378_13485 dc90531247d38005d7cf6344d442662c 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 1.6E-5 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_13485 dc90531247d38005d7cf6344d442662c 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 1.6E-5 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_13485 dc90531247d38005d7cf6344d442662c 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 1.6E-5 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_13485 dc90531247d38005d7cf6344d442662c 307 SUPERFAMILY SSF46785 1 112 2.28E-23 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM378_13485 dc90531247d38005d7cf6344d442662c 307 Gene3D G3DSA:1.10.10.10 1 86 6.9E-25 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_13485 dc90531247d38005d7cf6344d442662c 307 Gene3D G3DSA:3.40.190.10 92 289 1.3E-46 T 15-10-2018 AM378_13485 dc90531247d38005d7cf6344d442662c 307 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 1.0E-19 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_13485 dc90531247d38005d7cf6344d442662c 307 SUPERFAMILY SSF53850 87 299 7.67E-39 T 15-10-2018 AM378_13485 dc90531247d38005d7cf6344d442662c 307 Gene3D G3DSA:3.40.190.10 164 269 1.3E-46 T 15-10-2018 AM378_20615 79be670807ebb66ebbf60f15ba6a820c 234 ProSitePatterns PS01199 Ribosomal protein L1 signature. 121 139 - T 15-10-2018 IPR023673 Ribosomal protein L1, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM378_20615 79be670807ebb66ebbf60f15ba6a820c 234 Gene3D G3DSA:3.40.50.790 68 159 6.9E-81 T 15-10-2018 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich AM378_20615 79be670807ebb66ebbf60f15ba6a820c 234 Hamap MF_01318_B 50S ribosomal protein L1 [rplA]. 2 229 43.367 T 15-10-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 AM378_20615 79be670807ebb66ebbf60f15ba6a820c 234 PIRSF PIRSF002155 1 227 1.1E-77 T 15-10-2018 IPR002143 Ribosomal protein L1 GO:0003723|GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM378_20615 79be670807ebb66ebbf60f15ba6a820c 234 TIGRFAM TIGR01169 rplA_bact: ribosomal protein uL1 3 227 2.1E-107 T 15-10-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 AM378_20615 79be670807ebb66ebbf60f15ba6a820c 234 Gene3D G3DSA:3.30.190.20 25 222 6.9E-81 T 15-10-2018 AM378_20615 79be670807ebb66ebbf60f15ba6a820c 234 Pfam PF00687 Ribosomal protein L1p/L10e family 30 219 1.0E-51 T 15-10-2018 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein AM378_20615 79be670807ebb66ebbf60f15ba6a820c 234 SUPERFAMILY SSF56808 6 225 3.01E-83 T 15-10-2018 IPR023674 Ribosomal protein L1-like AM378_17475 819dbc63ba2530364d745f0f724fd73a 179 SUPERFAMILY SSF55282 4 179 3.77E-79 T 15-10-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM378_17475 819dbc63ba2530364d745f0f724fd73a 179 ProSitePatterns PS00358 Ribosomal protein L5 signature. 57 73 - T 15-10-2018 IPR020929 Ribosomal protein L5, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM378_17475 819dbc63ba2530364d745f0f724fd73a 179 Hamap MF_01333_B 50S ribosomal protein L5 [rplE]. 1 179 45.041 T 15-10-2018 IPR020930 Ribosomal protein L5, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM378_17475 819dbc63ba2530364d745f0f724fd73a 179 Gene3D G3DSA:3.30.1440.10 1 179 1.5E-81 T 15-10-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM378_17475 819dbc63ba2530364d745f0f724fd73a 179 Pfam PF00281 Ribosomal protein L5 24 80 1.1E-28 T 15-10-2018 IPR031310 Ribosomal protein L5, N-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM378_17475 819dbc63ba2530364d745f0f724fd73a 179 Pfam PF00673 ribosomal L5P family C-terminus 84 177 1.9E-41 T 15-10-2018 IPR031309 Ribosomal protein L5, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM378_17475 819dbc63ba2530364d745f0f724fd73a 179 PIRSF PIRSF002161 1 179 2.6E-67 T 15-10-2018 IPR002132 Ribosomal protein L5 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM378_22425 343e077e6483a4c63995ce4ec46186da 109 Pfam PF01371 Trp repressor protein 17 103 1.0E-30 T 15-10-2018 IPR000831 Trp repressor GO:0003700|GO:0005622|GO:0006355 AM378_22425 343e077e6483a4c63995ce4ec46186da 109 TIGRFAM TIGR01321 TrpR: trp operon repressor 12 104 2.1E-37 T 15-10-2018 IPR013335 Trp repressor, bacterial GO:0006355 AM378_22425 343e077e6483a4c63995ce4ec46186da 109 SUPERFAMILY SSF48295 5 105 1.36E-30 T 15-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 AM378_22425 343e077e6483a4c63995ce4ec46186da 109 Hamap MF_00475 Trp operon repressor [trpR]. 15 108 24.317 T 15-10-2018 IPR013335 Trp repressor, bacterial GO:0006355 AM378_22425 343e077e6483a4c63995ce4ec46186da 109 Gene3D G3DSA:1.10.1270.10 8 108 2.0E-39 T 15-10-2018 IPR038116 TrpR-like superfamily AM378_22425 343e077e6483a4c63995ce4ec46186da 109 ProDom PD012582 REPRESSOR TRANSCRIPTION TRP OPERON DNA-BINDING REGULATION HOMOLOG AROH FOR TRYPTOPHAN 10 101 4.0E-33 T 15-10-2018 IPR013335 Trp repressor, bacterial GO:0006355 AM378_22425 343e077e6483a4c63995ce4ec46186da 109 PIRSF PIRSF003196 10 108 3.0E-41 T 15-10-2018 IPR013335 Trp repressor, bacterial GO:0006355 AM378_09430 624c24b5c3e0b5fd6df675cf6a4a1e21 549 Pfam PF13304 AAA domain, putative AbiEii toxin, Type IV TA system 266 331 6.0E-10 T 15-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AM378_09430 624c24b5c3e0b5fd6df675cf6a4a1e21 549 Pfam PF13476 AAA domain 6 236 8.3E-16 T 15-10-2018 IPR038729 Rad50/SbcC-type AAA domain AM378_09430 624c24b5c3e0b5fd6df675cf6a4a1e21 549 SUPERFAMILY SSF52540 1 336 6.24E-27 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_12125 c92b9f04e3d6fbdd61648f436493863c 275 PIRSF PIRSF018455 2 275 6.6E-118 T 15-10-2018 IPR005073 Peptidase M74, penicillin-insensitive murein endopeptidase GO:0004252|GO:0006508|GO:0030288 AM378_12125 c92b9f04e3d6fbdd61648f436493863c 275 Pfam PF03411 Penicillin-insensitive murein endopeptidase 36 269 5.0E-96 T 15-10-2018 IPR005073 Peptidase M74, penicillin-insensitive murein endopeptidase GO:0004252|GO:0006508|GO:0030288 AM378_12125 c92b9f04e3d6fbdd61648f436493863c 275 SUPERFAMILY SSF55166 21 271 7.53E-99 T 15-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 AM378_12125 c92b9f04e3d6fbdd61648f436493863c 275 Gene3D G3DSA:3.30.1380.10 20 273 2.2E-100 T 15-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 AM378_14455 e4ff14039205a1746fe7f9f1226138b9 441 Hamap MF_01105 Amino-acid acetyltransferase [argA]. 1 441 239.15 T 15-10-2018 IPR010167 Amino-acid N-acetyltransferase GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154 AM378_14455 e4ff14039205a1746fe7f9f1226138b9 441 Gene3D G3DSA:3.40.1160.10 7 292 1.4E-83 T 15-10-2018 IPR036393 Acetylglutamate kinase-like superfamily AM378_14455 e4ff14039205a1746fe7f9f1226138b9 441 PIRSF PIRSF000423 1 441 4.2E-209 T 15-10-2018 IPR010167 Amino-acid N-acetyltransferase GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154 AM378_14455 e4ff14039205a1746fe7f9f1226138b9 441 SUPERFAMILY SSF53633 4 290 7.4E-69 T 15-10-2018 IPR036393 Acetylglutamate kinase-like superfamily AM378_14455 e4ff14039205a1746fe7f9f1226138b9 441 TIGRFAM TIGR01890 N-Ac-Glu-synth: amino-acid N-acetyltransferase 8 440 7.7E-198 T 15-10-2018 IPR010167 Amino-acid N-acetyltransferase GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154 AM378_14455 e4ff14039205a1746fe7f9f1226138b9 441 Pfam PF00583 Acetyltransferase (GNAT) family 336 412 5.3E-7 T 15-10-2018 IPR000182 GNAT domain AM378_14455 e4ff14039205a1746fe7f9f1226138b9 441 Gene3D G3DSA:3.40.630.30 293 441 4.8E-39 T 15-10-2018 AM378_14455 e4ff14039205a1746fe7f9f1226138b9 441 SUPERFAMILY SSF55729 296 419 5.15E-19 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase AM378_14455 e4ff14039205a1746fe7f9f1226138b9 441 Pfam PF00696 Amino acid kinase family 25 267 7.1E-30 T 15-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 AM378_18155 cbd5517204f1f8dbbda71333b9d7634f 480 TIGRFAM TIGR00879 SP: MFS transporter, sugar porter (SP) family 4 453 2.0E-106 T 15-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 AM378_18155 cbd5517204f1f8dbbda71333b9d7634f 480 PRINTS PR00171 Sugar transporter signature 106 125 9.5E-23 T 15-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 AM378_18155 cbd5517204f1f8dbbda71333b9d7634f 480 PRINTS PR00171 Sugar transporter signature 353 374 9.5E-23 T 15-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 AM378_18155 cbd5517204f1f8dbbda71333b9d7634f 480 PRINTS PR00171 Sugar transporter signature 376 388 9.5E-23 T 15-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 AM378_18155 cbd5517204f1f8dbbda71333b9d7634f 480 PRINTS PR00171 Sugar transporter signature 268 278 9.5E-23 T 15-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 AM378_18155 cbd5517204f1f8dbbda71333b9d7634f 480 PRINTS PR00171 Sugar transporter signature 23 33 9.5E-23 T 15-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 AM378_18155 cbd5517204f1f8dbbda71333b9d7634f 480 Gene3D G3DSA:1.20.1250.20 5 458 2.0E-128 T 15-10-2018 AM378_18155 cbd5517204f1f8dbbda71333b9d7634f 480 SUPERFAMILY SSF103473 6 455 3.27E-74 T 15-10-2018 IPR036259 MFS transporter superfamily AM378_18155 cbd5517204f1f8dbbda71333b9d7634f 480 Pfam PF00083 Sugar (and other) transporter 16 457 3.5E-104 T 15-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 AM378_18155 cbd5517204f1f8dbbda71333b9d7634f 480 ProSitePatterns PS00217 Sugar transport proteins signature 2. 111 136 - T 15-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AM378_18820 8748f54acea815c0f9613868bd2f449a 157 SUPERFAMILY SSF75217 1 152 2.49E-45 T 15-10-2018 IPR029028 Alpha/beta knot methyltransferases AM378_18820 8748f54acea815c0f9613868bd2f449a 157 PIRSF PIRSF029256 1 154 5.8E-71 T 15-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 AM378_18820 8748f54acea815c0f9613868bd2f449a 157 TIGRFAM TIGR00185 tRNA_yibK_trmL: tRNA (cytidine(34)-2'-O)-methyltransferase 1 152 9.3E-73 T 15-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 AM378_18820 8748f54acea815c0f9613868bd2f449a 157 Pfam PF00588 SpoU rRNA Methylase family 2 142 7.5E-34 T 15-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 AM378_18820 8748f54acea815c0f9613868bd2f449a 157 Hamap MF_01885 tRNA (cytidine(34)-2'-O)-methyltransferase [trmL]. 2 151 34.422 T 15-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 AM378_18820 8748f54acea815c0f9613868bd2f449a 157 Gene3D G3DSA:3.40.1280.10 1 157 8.9E-73 T 15-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AM378_04655 2bd44201b82dc822a36a03b9086a9c2a 239 SMART SM00345 14 73 3.9E-18 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM378_04655 2bd44201b82dc822a36a03b9086a9c2a 239 Gene3D G3DSA:1.10.10.10 1 73 3.5E-21 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_04655 2bd44201b82dc822a36a03b9086a9c2a 239 Pfam PF07729 FCD domain 98 223 2.6E-24 T 15-10-2018 IPR011711 GntR, C-terminal AM378_04655 2bd44201b82dc822a36a03b9086a9c2a 239 Gene3D G3DSA:1.20.120.530 85 237 3.3E-29 T 15-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AM378_04655 2bd44201b82dc822a36a03b9086a9c2a 239 SUPERFAMILY SSF46785 1 92 6.99E-21 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM378_04655 2bd44201b82dc822a36a03b9086a9c2a 239 SMART SM00895 97 224 7.2E-21 T 15-10-2018 IPR011711 GntR, C-terminal AM378_04655 2bd44201b82dc822a36a03b9086a9c2a 239 Pfam PF00392 Bacterial regulatory proteins, gntR family 12 73 1.3E-18 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM378_04655 2bd44201b82dc822a36a03b9086a9c2a 239 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 47 63 6.0E-9 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM378_04655 2bd44201b82dc822a36a03b9086a9c2a 239 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 33 47 6.0E-9 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM378_04655 2bd44201b82dc822a36a03b9086a9c2a 239 SUPERFAMILY SSF48008 94 231 1.14E-24 T 15-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AM378_23360 9a5886e5f25a4bda608841c9d377008e 385 SUPERFAMILY SSF53850 104 290 7.49E-57 T 15-10-2018 AM378_23360 9a5886e5f25a4bda608841c9d377008e 385 Gene3D G3DSA:3.40.190.10 188 273 1.3E-56 T 15-10-2018 AM378_23360 9a5886e5f25a4bda608841c9d377008e 385 SUPERFAMILY SSF55021 279 376 1.28E-22 T 15-10-2018 AM378_23360 9a5886e5f25a4bda608841c9d377008e 385 ProSitePatterns PS00858 Prephenate dehydratase signature 2. 324 331 - T 15-10-2018 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 AM378_23360 9a5886e5f25a4bda608841c9d377008e 385 ProSitePatterns PS00857 Prephenate dehydratase signature 1. 260 282 - T 15-10-2018 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 AM378_23360 9a5886e5f25a4bda608841c9d377008e 385 Gene3D G3DSA:3.30.70.260 290 378 4.3E-23 T 15-10-2018 AM378_23360 9a5886e5f25a4bda608841c9d377008e 385 PIRSF PIRSF001500 1 379 7.5E-139 T 15-10-2018 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase GO:0004106|GO:0004664|GO:0005737|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 AM378_23360 9a5886e5f25a4bda608841c9d377008e 385 Gene3D G3DSA:1.20.59.10 1 106 2.0E-33 T 15-10-2018 IPR036979 Chorismate mutase domain superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 AM378_23360 9a5886e5f25a4bda608841c9d377008e 385 Gene3D G3DSA:3.40.190.10 107 280 1.3E-56 T 15-10-2018 AM378_23360 9a5886e5f25a4bda608841c9d377008e 385 SUPERFAMILY SSF48600 5 91 1.83E-21 T 15-10-2018 IPR036263 Chorismate mutase type II superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 AM378_23360 9a5886e5f25a4bda608841c9d377008e 385 TIGRFAM TIGR01797 CM_P_1: chorismate mutase 6 88 1.2E-33 T 15-10-2018 IPR010952 Chorismate mutase, gammaproteobacteria GO:0004106|GO:0005737|GO:0009094 KEGG: 00400+5.4.99.5+4.2.1.51|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7432|MetaCyc: PWY-7626 AM378_23360 9a5886e5f25a4bda608841c9d377008e 385 Pfam PF00800 Prephenate dehydratase 105 285 4.8E-61 T 15-10-2018 IPR001086 Prephenate dehydratase GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 AM378_23360 9a5886e5f25a4bda608841c9d377008e 385 SMART SM00830 10 90 2.6E-23 T 15-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 AM378_23360 9a5886e5f25a4bda608841c9d377008e 385 Pfam PF01817 Chorismate mutase type II 10 88 1.0E-15 T 15-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 AM378_16885 fbe4d8d6174a9c7b0a8a15f4244c4861 333 Pfam PF00174 Oxidoreductase molybdopterin binding domain 107 266 2.6E-28 T 15-10-2018 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 AM378_16885 fbe4d8d6174a9c7b0a8a15f4244c4861 333 Hamap MF_01206 Protein-methionine-sulfoxide reductase catalytic subunit MsrP [msrP]. 5 333 55.549 T 15-10-2018 IPR022867 Protein-methionine-sulfoxide reductase subunit MsrP GO:0016667|GO:0030091|GO:0043546|GO:0055114 AM378_16885 fbe4d8d6174a9c7b0a8a15f4244c4861 333 Gene3D G3DSA:3.90.420.10 63 333 5.7E-124 T 15-10-2018 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily GO:0042128 Reactome: R-HSA-1614517 AM378_16885 fbe4d8d6174a9c7b0a8a15f4244c4861 333 SUPERFAMILY SSF56524 75 329 7.98E-93 T 15-10-2018 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily GO:0042128 Reactome: R-HSA-1614517 AM378_19025 090e380388cc23d566ce4dca1b205778 205 Pfam PF03458 UPF0126 domain 5 78 3.3E-19 T 15-10-2018 IPR005115 Uncharacterised domain UPF0126 AM378_19025 090e380388cc23d566ce4dca1b205778 205 Pfam PF03458 UPF0126 domain 91 164 3.7E-21 T 15-10-2018 IPR005115 Uncharacterised domain UPF0126 AM378_14335 dacd727bd79c0878cda411fb29aa6b56 274 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 134 162 - T 15-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 AM378_14335 dacd727bd79c0878cda411fb29aa6b56 274 Gene3D G3DSA:1.10.166.10 1 70 1.8E-34 T 15-10-2018 IPR037133 Tetrahydrodipicolinate-N-succinyltransferase, N-terminal domain superfamily KEGG: 00300+2.3.1.117 AM378_14335 dacd727bd79c0878cda411fb29aa6b56 274 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 175 209 8.7E-13 T 15-10-2018 IPR001451 Hexapeptide repeat AM378_14335 dacd727bd79c0878cda411fb29aa6b56 274 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 133 166 0.0018 T 15-10-2018 IPR001451 Hexapeptide repeat AM378_14335 dacd727bd79c0878cda411fb29aa6b56 274 SUPERFAMILY SSF51161 1 256 1.52E-79 T 15-10-2018 IPR011004 Trimeric LpxA-like superfamily AM378_14335 dacd727bd79c0878cda411fb29aa6b56 274 Pfam PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal 3 69 5.6E-25 T 15-10-2018 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 KEGG: 00300+2.3.1.117 AM378_14335 dacd727bd79c0878cda411fb29aa6b56 274 TIGRFAM TIGR00965 dapD: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase 3 273 2.1E-162 T 15-10-2018 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117 AM378_14335 dacd727bd79c0878cda411fb29aa6b56 274 Hamap MF_00811 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [dapD]. 1 272 58.725 T 15-10-2018 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117 AM378_14335 dacd727bd79c0878cda411fb29aa6b56 274 Gene3D G3DSA:2.160.10.10 87 257 3.0E-58 T 15-10-2018 AM378_12780 c1d7b9de02d78ee36ff499ddd262cbfe 1045 Gene3D G3DSA:3.30.70.1440 670 866 0.0 T 15-10-2018 AM378_12780 c1d7b9de02d78ee36ff499ddd262cbfe 1045 SUPERFAMILY SSF82714 182 271 3.4E-23 T 15-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AM378_12780 c1d7b9de02d78ee36ff499ddd262cbfe 1045 Pfam PF00873 AcrB/AcrD/AcrF family 1 1027 0.0 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AM378_12780 c1d7b9de02d78ee36ff499ddd262cbfe 1045 Gene3D G3DSA:3.30.2090.10 722 810 0.0 T 15-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AM378_12780 c1d7b9de02d78ee36ff499ddd262cbfe 1045 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 1 1039 0.0 T 15-10-2018 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0006855|GO:0015562|GO:0016021 AM378_12780 c1d7b9de02d78ee36ff499ddd262cbfe 1045 SUPERFAMILY SSF82866 299 497 1.14E-48 T 15-10-2018 AM378_12780 c1d7b9de02d78ee36ff499ddd262cbfe 1045 Gene3D G3DSA:3.30.70.1320 133 332 0.0 T 15-10-2018 AM378_12780 c1d7b9de02d78ee36ff499ddd262cbfe 1045 SUPERFAMILY SSF82714 723 810 4.84E-24 T 15-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AM378_12780 c1d7b9de02d78ee36ff499ddd262cbfe 1045 Gene3D G3DSA:3.30.70.1430 38 818 0.0 T 15-10-2018 AM378_12780 c1d7b9de02d78ee36ff499ddd262cbfe 1045 SUPERFAMILY SSF82693 137 330 3.92E-23 T 15-10-2018 AM378_12780 c1d7b9de02d78ee36ff499ddd262cbfe 1045 SUPERFAMILY SSF82693 566 672 1.31E-27 T 15-10-2018 AM378_12780 c1d7b9de02d78ee36ff499ddd262cbfe 1045 SUPERFAMILY SSF82693 39 132 1.74E-27 T 15-10-2018 AM378_12780 c1d7b9de02d78ee36ff499ddd262cbfe 1045 PRINTS PR00702 Acriflavin resistance protein family signature 363 384 2.7E-109 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AM378_12780 c1d7b9de02d78ee36ff499ddd262cbfe 1045 PRINTS PR00702 Acriflavin resistance protein family signature 622 636 2.7E-109 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AM378_12780 c1d7b9de02d78ee36ff499ddd262cbfe 1045 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 2.7E-109 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AM378_12780 c1d7b9de02d78ee36ff499ddd262cbfe 1045 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 2.7E-109 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AM378_12780 c1d7b9de02d78ee36ff499ddd262cbfe 1045 PRINTS PR00702 Acriflavin resistance protein family signature 336 359 2.7E-109 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AM378_12780 c1d7b9de02d78ee36ff499ddd262cbfe 1045 PRINTS PR00702 Acriflavin resistance protein family signature 391 415 2.7E-109 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AM378_12780 c1d7b9de02d78ee36ff499ddd262cbfe 1045 PRINTS PR00702 Acriflavin resistance protein family signature 445 468 2.7E-109 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AM378_12780 c1d7b9de02d78ee36ff499ddd262cbfe 1045 PRINTS PR00702 Acriflavin resistance protein family signature 553 570 2.7E-109 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AM378_12780 c1d7b9de02d78ee36ff499ddd262cbfe 1045 PRINTS PR00702 Acriflavin resistance protein family signature 470 493 2.7E-109 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AM378_12780 c1d7b9de02d78ee36ff499ddd262cbfe 1045 Gene3D G3DSA:1.20.1640.10 8 513 0.0 T 15-10-2018 AM378_12780 c1d7b9de02d78ee36ff499ddd262cbfe 1045 Gene3D G3DSA:3.30.2090.10 179 275 0.0 T 15-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AM378_12780 c1d7b9de02d78ee36ff499ddd262cbfe 1045 Gene3D G3DSA:1.20.1640.10 514 1023 0.0 T 15-10-2018 AM378_12780 c1d7b9de02d78ee36ff499ddd262cbfe 1045 SUPERFAMILY SSF82866 807 1031 4.45E-44 T 15-10-2018 AM378_12780 c1d7b9de02d78ee36ff499ddd262cbfe 1045 Gene3D G3DSA:3.30.70.1430 568 669 0.0 T 15-10-2018 AM378_21570 10c56d189ff442efc60a85769082ae2f 304 SUPERFAMILY SSF53850 94 301 3.57E-48 T 15-10-2018 AM378_21570 10c56d189ff442efc60a85769082ae2f 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 8.6E-6 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_21570 10c56d189ff442efc60a85769082ae2f 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 8.6E-6 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_21570 10c56d189ff442efc60a85769082ae2f 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 8.6E-6 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_21570 10c56d189ff442efc60a85769082ae2f 304 Gene3D G3DSA:3.40.190.290 95 298 1.5E-63 T 15-10-2018 AM378_21570 10c56d189ff442efc60a85769082ae2f 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 67 7.9E-18 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_21570 10c56d189ff442efc60a85769082ae2f 304 Gene3D G3DSA:1.10.10.10 8 87 1.1E-20 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_21570 10c56d189ff442efc60a85769082ae2f 304 SUPERFAMILY SSF46785 9 116 1.42E-19 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM378_21570 10c56d189ff442efc60a85769082ae2f 304 Pfam PF03466 LysR substrate binding domain 92 297 5.5E-48 T 15-10-2018 IPR005119 LysR, substrate-binding AM378_06440 370c05dab00fc5d90a451515cd540f4d 265 SUPERFAMILY SSF46689 215 263 2.46E-11 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AM378_06440 370c05dab00fc5d90a451515cd540f4d 265 SMART SM00342 179 261 1.3E-29 T 15-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM378_06440 370c05dab00fc5d90a451515cd540f4d 265 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 216 257 - T 15-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AM378_06440 370c05dab00fc5d90a451515cd540f4d 265 Gene3D G3DSA:1.10.10.60 222 265 1.0E-13 T 15-10-2018 AM378_06440 370c05dab00fc5d90a451515cd540f4d 265 SUPERFAMILY SSF51215 17 89 1.44E-10 T 15-10-2018 IPR037923 Transcription regulator HTH-like AM378_06440 370c05dab00fc5d90a451515cd540f4d 265 SUPERFAMILY SSF46689 165 214 6.17E-12 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AM378_06440 370c05dab00fc5d90a451515cd540f4d 265 Pfam PF12833 Helix-turn-helix domain 185 263 5.4E-24 T 15-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM378_06440 370c05dab00fc5d90a451515cd540f4d 265 Pfam PF02311 AraC-like ligand binding domain 9 100 9.7E-13 T 15-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 AM378_06440 370c05dab00fc5d90a451515cd540f4d 265 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 245 261 3.9E-5 T 15-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM378_06440 370c05dab00fc5d90a451515cd540f4d 265 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 230 245 3.9E-5 T 15-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM378_06440 370c05dab00fc5d90a451515cd540f4d 265 Gene3D G3DSA:1.10.10.60 164 221 1.1E-15 T 15-10-2018 AM378_03305 1bf17ac7566574efac20ef0175c2b9d8 115 PIRSF PIRSF002599 15 114 3.8E-18 T 15-10-2018 IPR012156 Cold shock, CspA GO:0003676 AM378_03305 1bf17ac7566574efac20ef0175c2b9d8 115 Pfam PF06961 Protein of unknown function (DUF1294) 33 87 2.1E-24 T 15-10-2018 IPR010718 Protein of unknown function DUF1294 AM378_23275 7de21724343b903c2e74fff0ede5fde0 188 Gene3D G3DSA:1.10.150.240 19 84 6.9E-48 T 15-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 AM378_23275 7de21724343b903c2e74fff0ede5fde0 188 SUPERFAMILY SSF56784 4 186 1.3E-47 T 15-10-2018 IPR036412 HAD-like superfamily AM378_23275 7de21724343b903c2e74fff0ede5fde0 188 Pfam PF13419 Haloacid dehalogenase-like hydrolase 8 183 2.5E-29 T 15-10-2018 AM378_23275 7de21724343b903c2e74fff0ede5fde0 188 Gene3D G3DSA:3.40.50.1000 8 185 6.9E-48 T 15-10-2018 IPR023214 HAD superfamily AM378_23275 7de21724343b903c2e74fff0ede5fde0 188 TIGRFAM TIGR02009 PGMB-YQAB-SF: beta-phosphoglucomutase family hydrolase 5 185 1.3E-60 T 15-10-2018 IPR010976 Beta-phosphoglucomutase hydrolase AM378_23275 7de21724343b903c2e74fff0ede5fde0 188 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 122 183 7.2E-15 T 15-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AM378_00785 928009344e8b08073d2449dd1a62d99b 393 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 9 392 6.5E-129 T 15-10-2018 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 AM378_00785 928009344e8b08073d2449dd1a62d99b 393 Gene3D G3DSA:3.50.50.60 9 340 2.1E-106 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AM378_00785 928009344e8b08073d2449dd1a62d99b 393 Gene3D G3DSA:3.30.9.50 84 271 2.1E-106 T 15-10-2018 AM378_00785 928009344e8b08073d2449dd1a62d99b 393 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 297 313 7.7E-17 T 15-10-2018 AM378_00785 928009344e8b08073d2449dd1a62d99b 393 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 159 174 7.7E-17 T 15-10-2018 AM378_00785 928009344e8b08073d2449dd1a62d99b 393 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 282 297 7.7E-17 T 15-10-2018 AM378_00785 928009344e8b08073d2449dd1a62d99b 393 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 9 31 7.7E-17 T 15-10-2018 AM378_00785 928009344e8b08073d2449dd1a62d99b 393 SUPERFAMILY SSF51905 8 384 1.08E-58 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AM378_00785 928009344e8b08073d2449dd1a62d99b 393 Pfam PF01494 FAD binding domain 8 341 5.8E-26 T 15-10-2018 IPR002938 FAD-binding domain GO:0071949 AM378_12900 47c876d25cd1f750ebcefbf62cc2ce3a 179 SUPERFAMILY SSF46785 4 144 9.49E-32 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM378_12900 47c876d25cd1f750ebcefbf62cc2ce3a 179 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 4 139 3.0E-28 T 15-10-2018 IPR000944 Transcription regulator Rrf2-type AM378_12900 47c876d25cd1f750ebcefbf62cc2ce3a 179 Pfam PF02082 Transcriptional regulator 4 83 2.1E-24 T 15-10-2018 IPR000944 Transcription regulator Rrf2-type AM378_12900 47c876d25cd1f750ebcefbf62cc2ce3a 179 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 49 67 - T 15-10-2018 IPR030489 Transcription regulator Rrf2-type, conserved site AM378_12900 47c876d25cd1f750ebcefbf62cc2ce3a 179 Gene3D G3DSA:1.10.10.10 2 150 1.0E-30 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_09515 86b85a2d8c5a18cabb33e592766769fa 250 Gene3D G3DSA:3.40.50.300 1 249 9.1E-85 T 15-10-2018 AM378_09515 86b85a2d8c5a18cabb33e592766769fa 250 SMART SM00382 28 221 6.7E-21 T 15-10-2018 IPR003593 AAA+ ATPase domain AM378_09515 86b85a2d8c5a18cabb33e592766769fa 250 PIRSF PIRSF039085 1 249 1.2E-114 T 15-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 AM378_09515 86b85a2d8c5a18cabb33e592766769fa 250 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM378_09515 86b85a2d8c5a18cabb33e592766769fa 250 Pfam PF00005 ABC transporter 19 173 5.9E-35 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM378_09515 86b85a2d8c5a18cabb33e592766769fa 250 SUPERFAMILY SSF52540 4 243 4.58E-80 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_18335 eb001b20ddb58b1206a88504a42d1af7 447 Pfam PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 57 184 2.9E-50 T 15-10-2018 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 AM378_18335 eb001b20ddb58b1206a88504a42d1af7 447 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 114 128 3.1E-32 T 15-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 AM378_18335 eb001b20ddb58b1206a88504a42d1af7 447 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 372 383 3.1E-32 T 15-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 AM378_18335 eb001b20ddb58b1206a88504a42d1af7 447 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 193 215 3.1E-32 T 15-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 AM378_18335 eb001b20ddb58b1206a88504a42d1af7 447 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 235 255 3.1E-32 T 15-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 AM378_18335 eb001b20ddb58b1206a88504a42d1af7 447 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 202 445 7.4E-86 T 15-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 AM378_18335 eb001b20ddb58b1206a88504a42d1af7 447 SUPERFAMILY SSF53223 7 196 2.37E-74 T 15-10-2018 AM378_18335 eb001b20ddb58b1206a88504a42d1af7 447 Gene3D G3DSA:1.10.285.10 14 374 3.5E-176 T 15-10-2018 AM378_18335 eb001b20ddb58b1206a88504a42d1af7 447 SUPERFAMILY SSF51735 202 446 1.17E-73 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily AM378_18335 eb001b20ddb58b1206a88504a42d1af7 447 Gene3D G3DSA:1.10.285.10 401 447 1.6E-10 T 15-10-2018 AM378_18335 eb001b20ddb58b1206a88504a42d1af7 447 Gene3D G3DSA:3.40.50.10860 55 190 3.5E-176 T 15-10-2018 AM378_18335 eb001b20ddb58b1206a88504a42d1af7 447 SMART SM00839 204 445 1.9E-92 T 15-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 AM378_18335 eb001b20ddb58b1206a88504a42d1af7 447 PIRSF PIRSF000185 23 447 7.3E-115 T 15-10-2018 IPR014362 Glutamate dehydrogenase GO:0016639|GO:0055114 AM378_18335 eb001b20ddb58b1206a88504a42d1af7 447 ProSitePatterns PS00074 Glu / Leu / Phe / Val dehydrogenases active site. 122 135 - T 15-10-2018 IPR033524 Leu/Phe/Val dehydrogenases active site Reactome: R-HSA-2151201|Reactome: R-HSA-70614 AM378_18335 eb001b20ddb58b1206a88504a42d1af7 447 Gene3D G3DSA:3.40.50.720 209 373 3.5E-176 T 15-10-2018 AM378_19535 6bcff836a414d3d25f13a62534950e11 220 SUPERFAMILY SSF103088 103 218 5.36E-38 T 15-10-2018 IPR036737 OmpA-like domain superfamily AM378_19535 6bcff836a414d3d25f13a62534950e11 220 PRINTS PR01021 OMPA domain signature 116 138 4.4E-13 T 15-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AM378_19535 6bcff836a414d3d25f13a62534950e11 220 PRINTS PR01021 OMPA domain signature 161 177 4.4E-13 T 15-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AM378_19535 6bcff836a414d3d25f13a62534950e11 220 PRINTS PR01021 OMPA domain signature 146 161 4.4E-13 T 15-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AM378_19535 6bcff836a414d3d25f13a62534950e11 220 ProSitePatterns PS01068 OmpA-like domain. 148 192 - T 15-10-2018 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 AM378_19535 6bcff836a414d3d25f13a62534950e11 220 Pfam PF13488 Glycine zipper 37 85 3.9E-11 T 15-10-2018 IPR039567 Glycine zipper domain AM378_19535 6bcff836a414d3d25f13a62534950e11 220 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 199 219 7.4E-5 T 15-10-2018 AM378_19535 6bcff836a414d3d25f13a62534950e11 220 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 179 198 7.4E-5 T 15-10-2018 AM378_19535 6bcff836a414d3d25f13a62534950e11 220 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 161 178 7.4E-5 T 15-10-2018 AM378_19535 6bcff836a414d3d25f13a62534950e11 220 Pfam PF00691 OmpA family 115 210 7.5E-22 T 15-10-2018 IPR006665 OmpA-like domain AM378_19535 6bcff836a414d3d25f13a62534950e11 220 Gene3D G3DSA:3.30.1330.60 79 220 6.5E-54 T 15-10-2018 IPR036737 OmpA-like domain superfamily AM378_06755 1580b934243b001e43cd009007cc33c0 506 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 261 268 - T 15-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 AM378_06755 1580b934243b001e43cd009007cc33c0 506 Gene3D G3DSA:3.40.309.10 265 463 9.3E-160 T 15-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 AM378_06755 1580b934243b001e43cd009007cc33c0 506 Pfam PF00171 Aldehyde dehydrogenase family 28 493 1.6E-158 T 15-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 AM378_06755 1580b934243b001e43cd009007cc33c0 506 Gene3D G3DSA:3.40.605.10 36 491 9.3E-160 T 15-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 AM378_06755 1580b934243b001e43cd009007cc33c0 506 SUPERFAMILY SSF53720 12 497 1.06E-159 T 15-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 AM378_06755 1580b934243b001e43cd009007cc33c0 506 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 294 305 - T 15-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 AM378_23510 c8f9fbeeffd2d417ef036d65826c172c 229 Gene3D G3DSA:3.40.50.1000 5 208 2.2E-75 T 15-10-2018 IPR023214 HAD superfamily AM378_23510 c8f9fbeeffd2d417ef036d65826c172c 229 Gene3D G3DSA:1.10.720.60 16 99 2.2E-75 T 15-10-2018 AM378_23510 c8f9fbeeffd2d417ef036d65826c172c 229 Pfam PF00702 haloacid dehalogenase-like hydrolase 2 196 7.3E-6 T 15-10-2018 AM378_23510 c8f9fbeeffd2d417ef036d65826c172c 229 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 191 204 1.5E-7 T 15-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AM378_23510 c8f9fbeeffd2d417ef036d65826c172c 229 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 114 127 1.5E-7 T 15-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AM378_23510 c8f9fbeeffd2d417ef036d65826c172c 229 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 2 13 1.5E-7 T 15-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AM378_23510 c8f9fbeeffd2d417ef036d65826c172c 229 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 164 184 1.5E-7 T 15-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AM378_23510 c8f9fbeeffd2d417ef036d65826c172c 229 Hamap MF_01681 Enolase-phosphatase E1 [mtnC]. 1 222 42.207 T 15-10-2018 IPR023943 Enolase-phosphatase E1 GO:0000287|GO:0019509|GO:0043874 KEGG: 00270+3.1.3.77|Reactome: R-HSA-1237112 AM378_23510 c8f9fbeeffd2d417ef036d65826c172c 229 TIGRFAM TIGR01691 enolase-ppase: 2,3-diketo-5-methylthio-1-phosphopentane phosphatase 2 221 1.7E-88 T 15-10-2018 IPR023943 Enolase-phosphatase E1 GO:0000287|GO:0019509|GO:0043874 KEGG: 00270+3.1.3.77|Reactome: R-HSA-1237112 AM378_23510 c8f9fbeeffd2d417ef036d65826c172c 229 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 116 196 1.2E-6 T 15-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AM378_23510 c8f9fbeeffd2d417ef036d65826c172c 229 SUPERFAMILY SSF56784 1 218 2.03E-60 T 15-10-2018 IPR036412 HAD-like superfamily AM378_01960 6ca1d54357f65ec7aafbebd155520b62 281 ProSitePatterns PS00380 Rhodanese signature 1. 43 54 - T 15-10-2018 IPR001307 Thiosulphate sulfurtransferase, conserved site GO:0004792 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350|MetaCyc: PWY-7927|Reactome: R-HSA-1614558 AM378_01960 6ca1d54357f65ec7aafbebd155520b62 281 SUPERFAMILY SSF52821 1 154 3.8E-41 T 15-10-2018 IPR036873 Rhodanese-like domain superfamily AM378_01960 6ca1d54357f65ec7aafbebd155520b62 281 Gene3D G3DSA:3.40.250.10 2 150 1.1E-46 T 15-10-2018 IPR036873 Rhodanese-like domain superfamily AM378_01960 6ca1d54357f65ec7aafbebd155520b62 281 Gene3D G3DSA:3.40.250.10 151 276 3.9E-36 T 15-10-2018 IPR036873 Rhodanese-like domain superfamily AM378_01960 6ca1d54357f65ec7aafbebd155520b62 281 ProSitePatterns PS00683 Rhodanese C-terminal signature. 259 269 - T 15-10-2018 IPR001307 Thiosulphate sulfurtransferase, conserved site GO:0004792 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350|MetaCyc: PWY-7927|Reactome: R-HSA-1614558 AM378_01960 6ca1d54357f65ec7aafbebd155520b62 281 SUPERFAMILY SSF52821 168 273 3.8E-31 T 15-10-2018 IPR036873 Rhodanese-like domain superfamily AM378_01960 6ca1d54357f65ec7aafbebd155520b62 281 SMART SM00450 7 133 1.2E-23 T 15-10-2018 IPR001763 Rhodanese-like domain AM378_01960 6ca1d54357f65ec7aafbebd155520b62 281 SMART SM00450 156 275 1.4E-15 T 15-10-2018 IPR001763 Rhodanese-like domain AM378_01960 6ca1d54357f65ec7aafbebd155520b62 281 Pfam PF00581 Rhodanese-like domain 160 270 4.9E-13 T 15-10-2018 IPR001763 Rhodanese-like domain AM378_01960 6ca1d54357f65ec7aafbebd155520b62 281 Pfam PF00581 Rhodanese-like domain 8 129 2.4E-18 T 15-10-2018 IPR001763 Rhodanese-like domain AM378_21515 5fc368c4b1b6d28d99b7938618c902de 361 Pfam PF05861 Bacterial phosphonate metabolism protein (PhnI) 1 351 1.3E-156 T 15-10-2018 IPR008773 Phosphonate metabolism protein PhnI GO:0019634 AM378_21515 5fc368c4b1b6d28d99b7938618c902de 361 PIRSF PIRSF007313 1 361 9.5E-166 T 15-10-2018 IPR008773 Phosphonate metabolism protein PhnI GO:0019634 AM378_13980 f588f4de8d338e4c7cdb84ad67e72720 95 Pfam PF01402 Ribbon-helix-helix protein, copG family 4 37 1.7E-4 T 15-10-2018 IPR002145 Ribbon-helix-helix protein, CopG GO:0006355 AM378_13980 f588f4de8d338e4c7cdb84ad67e72720 95 SUPERFAMILY SSF47598 1 56 4.73E-10 T 15-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 AM378_13980 f588f4de8d338e4c7cdb84ad67e72720 95 Gene3D G3DSA:1.10.1220.10 4 54 1.5E-5 T 15-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 AM378_17675 274b76741aaee0ca1464f0ba6ad98e3c 326 PIRSF PIRSF005211 1 324 5.4E-102 T 15-10-2018 IPR012020 AB hydrolase 4 family AM378_17675 274b76741aaee0ca1464f0ba6ad98e3c 326 Gene3D G3DSA:3.40.50.1820 41 300 4.2E-25 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold AM378_17675 274b76741aaee0ca1464f0ba6ad98e3c 326 SUPERFAMILY SSF53474 31 299 5.12E-39 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold AM378_17675 274b76741aaee0ca1464f0ba6ad98e3c 326 ProSitePatterns PS01133 Uncharacterized protein family UPF0017 signature. 226 267 - T 15-10-2018 IPR000952 AB hydrolase 4, conserved site AM378_17675 274b76741aaee0ca1464f0ba6ad98e3c 326 Pfam PF00561 alpha/beta hydrolase fold 63 298 1.2E-17 T 15-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AM378_11015 228fbaa9d2d9fcbc1947715283f20227 304 Pfam PF02653 Branched-chain amino acid transport system / permease component 9 288 2.6E-52 T 15-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 AM378_16455 273633cbddf82b05715b5d77a262c366 328 PIRSF PIRSF015753 5 324 1.8E-132 T 15-10-2018 IPR016639 Glutathione S-transferase Omega/GSH GO:0004364 AM378_16455 273633cbddf82b05715b5d77a262c366 328 Gene3D G3DSA:3.40.30.130 1 175 2.8E-78 T 15-10-2018 AM378_16455 273633cbddf82b05715b5d77a262c366 328 Pfam PF13410 Glutathione S-transferase, C-terminal domain 203 257 1.3E-12 T 15-10-2018 AM378_16455 273633cbddf82b05715b5d77a262c366 328 SUPERFAMILY SSF47616 176 324 2.78E-34 T 15-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily AM378_16455 273633cbddf82b05715b5d77a262c366 328 SUPERFAMILY SSF52833 43 163 5.7E-14 T 15-10-2018 IPR036249 Thioredoxin-like superfamily AM378_16455 273633cbddf82b05715b5d77a262c366 328 Pfam PF13409 Glutathione S-transferase, N-terminal domain 62 158 3.9E-24 T 15-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AM378_16455 273633cbddf82b05715b5d77a262c366 328 Gene3D G3DSA:1.20.1050.10 179 328 2.8E-66 T 15-10-2018 AM378_12570 58d624eda9daa3f8125a45c75b58dc76 673 SMART SM00278 446 465 15.0 T 15-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 AM378_12570 58d624eda9daa3f8125a45c75b58dc76 673 SMART SM00278 480 499 3.4 T 15-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 AM378_12570 58d624eda9daa3f8125a45c75b58dc76 673 SMART SM00278 544 563 310.0 T 15-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 AM378_12570 58d624eda9daa3f8125a45c75b58dc76 673 SMART SM00278 512 531 200.0 T 15-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 AM378_12570 58d624eda9daa3f8125a45c75b58dc76 673 Gene3D G3DSA:2.20.70.80 391 431 7.6E-21 T 15-10-2018 AM378_12570 58d624eda9daa3f8125a45c75b58dc76 673 ProSitePatterns PS01055 NAD-dependent DNA ligase signature 1. 115 144 - T 15-10-2018 IPR018239 NAD-dependent DNA ligase, active site AM378_12570 58d624eda9daa3f8125a45c75b58dc76 673 Pfam PF14520 Helix-hairpin-helix domain 446 502 8.1E-5 T 15-10-2018 AM378_12570 58d624eda9daa3f8125a45c75b58dc76 673 Gene3D G3DSA:1.10.150.20 506 588 1.9E-26 T 15-10-2018 AM378_12570 58d624eda9daa3f8125a45c75b58dc76 673 Pfam PF12826 Helix-hairpin-helix motif 510 573 2.0E-20 T 15-10-2018 AM378_12570 58d624eda9daa3f8125a45c75b58dc76 673 Gene3D G3DSA:3.30.1490.70 78 316 4.9E-101 T 15-10-2018 AM378_12570 58d624eda9daa3f8125a45c75b58dc76 673 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 322 398 6.1E-36 T 15-10-2018 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 AM378_12570 58d624eda9daa3f8125a45c75b58dc76 673 SUPERFAMILY SSF47781 403 580 4.08E-60 T 15-10-2018 IPR010994 RuvA domain 2-like AM378_12570 58d624eda9daa3f8125a45c75b58dc76 673 SUPERFAMILY SSF50249 318 400 7.71E-29 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold AM378_12570 58d624eda9daa3f8125a45c75b58dc76 673 TIGRFAM TIGR00575 dnlj: DNA ligase, NAD-dependent 11 667 1.1E-267 T 15-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 AM378_12570 58d624eda9daa3f8125a45c75b58dc76 673 Gene3D G3DSA:1.10.150.20 432 505 8.7E-30 T 15-10-2018 AM378_12570 58d624eda9daa3f8125a45c75b58dc76 673 Gene3D G3DSA:3.30.470.30 70 253 4.9E-101 T 15-10-2018 AM378_12570 58d624eda9daa3f8125a45c75b58dc76 673 Hamap MF_01588 DNA ligase [ligA]. 2 671 54.696 T 15-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 AM378_12570 58d624eda9daa3f8125a45c75b58dc76 673 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 4 318 1.9E-137 T 15-10-2018 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 AM378_12570 58d624eda9daa3f8125a45c75b58dc76 673 SMART SM00292 597 672 1.1E-13 T 15-10-2018 IPR001357 BRCT domain AM378_12570 58d624eda9daa3f8125a45c75b58dc76 673 SUPERFAMILY SSF56091 2 316 2.56E-122 T 15-10-2018 AM378_12570 58d624eda9daa3f8125a45c75b58dc76 673 SMART SM00532 3 448 6.0E-283 T 15-10-2018 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 AM378_12570 58d624eda9daa3f8125a45c75b58dc76 673 Gene3D G3DSA:1.10.287.610 1 69 2.5E-31 T 15-10-2018 AM378_12570 58d624eda9daa3f8125a45c75b58dc76 673 Gene3D G3DSA:3.40.50.10190 591 672 1.8E-26 T 15-10-2018 IPR036420 BRCT domain superfamily AM378_12570 58d624eda9daa3f8125a45c75b58dc76 673 PIRSF PIRSF001604 1 673 2.9E-253 T 15-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 AM378_12570 58d624eda9daa3f8125a45c75b58dc76 673 Gene3D G3DSA:2.40.50.140 317 390 2.5E-34 T 15-10-2018 AM378_12570 58d624eda9daa3f8125a45c75b58dc76 673 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 598 670 3.3E-13 T 15-10-2018 IPR001357 BRCT domain AM378_12570 58d624eda9daa3f8125a45c75b58dc76 673 ProSitePatterns PS01056 NAD-dependent DNA ligase signature 2. 331 346 - T 15-10-2018 IPR033136 NAD-dependent DNA ligase, conserved site AM378_12570 58d624eda9daa3f8125a45c75b58dc76 673 SUPERFAMILY SSF52113 598 670 4.09E-19 T 15-10-2018 IPR036420 BRCT domain superfamily AM378_12570 58d624eda9daa3f8125a45c75b58dc76 673 Pfam PF03119 NAD-dependent DNA ligase C4 zinc finger domain 407 434 4.3E-11 T 15-10-2018 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type GO:0003911|GO:0006260|GO:0006281 AM378_17660 a0cf62da6718734327cd4882742acc50 331 Gene3D G3DSA:1.10.8.450 236 279 2.6E-51 T 15-10-2018 AM378_17660 a0cf62da6718734327cd4882742acc50 331 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 27 235 3.7E-22 T 15-10-2018 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0022857|GO:0043190|GO:0055085 AM378_17660 a0cf62da6718734327cd4882742acc50 331 Gene3D G3DSA:3.40.190.10 105 200 2.6E-51 T 15-10-2018 AM378_17660 a0cf62da6718734327cd4882742acc50 331 SMART SM00062 27 242 7.9E-25 T 15-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AM378_17660 a0cf62da6718734327cd4882742acc50 331 SUPERFAMILY SSF53850 37 309 2.29E-46 T 15-10-2018 AM378_17660 a0cf62da6718734327cd4882742acc50 331 TIGRFAM TIGR01729 taurine_ABC_bnd: taurine ABC transporter, periplasmic binding protein 28 323 4.7E-136 T 15-10-2018 IPR010068 Taurine ABC transporter, substrate-binding protein TauA GO:0015734|GO:0042597 AM378_17660 a0cf62da6718734327cd4882742acc50 331 Gene3D G3DSA:3.40.190.10 29 308 2.6E-51 T 15-10-2018 AM378_19675 5cd3fd84a08551c25f5d7d5c4840dba0 613 Pfam PF09107 Elongation factor SelB, winged helix 560 605 3.7E-19 T 15-10-2018 IPR015191 Translation elongation factor SelB, winged helix, type 3 GO:0001514|GO:0003723|GO:0003746|GO:0005525|GO:0005737 AM378_19675 5cd3fd84a08551c25f5d7d5c4840dba0 613 Gene3D G3DSA:3.40.50.300 1 166 1.2E-44 T 15-10-2018 AM378_19675 5cd3fd84a08551c25f5d7d5c4840dba0 613 SUPERFAMILY SSF50447 175 293 1.61E-22 T 15-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily AM378_19675 5cd3fd84a08551c25f5d7d5c4840dba0 613 SUPERFAMILY SSF52540 2 162 1.47E-40 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_19675 5cd3fd84a08551c25f5d7d5c4840dba0 613 Gene3D G3DSA:1.10.10.10 487 546 4.6E-26 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_19675 5cd3fd84a08551c25f5d7d5c4840dba0 613 SUPERFAMILY SSF46785 415 483 6.91E-13 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM378_19675 5cd3fd84a08551c25f5d7d5c4840dba0 613 Gene3D G3DSA:2.40.30.10 171 283 8.8E-24 T 15-10-2018 AM378_19675 5cd3fd84a08551c25f5d7d5c4840dba0 613 Pfam PF00009 Elongation factor Tu GTP binding domain 2 159 1.7E-30 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM378_19675 5cd3fd84a08551c25f5d7d5c4840dba0 613 Pfam PF09106 Elongation factor SelB, winged helix 424 480 2.6E-16 T 15-10-2018 IPR015190 Translation elongation factor SelB, winged helix, type 2 GO:0001514|GO:0003723|GO:0003746|GO:0005525|GO:0005737 AM378_19675 5cd3fd84a08551c25f5d7d5c4840dba0 613 SUPERFAMILY SSF46785 488 545 1.29E-5 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM378_19675 5cd3fd84a08551c25f5d7d5c4840dba0 613 Gene3D G3DSA:1.10.10.10 547 607 6.7E-27 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_19675 5cd3fd84a08551c25f5d7d5c4840dba0 613 SUPERFAMILY SSF46785 552 607 4.28E-14 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM378_19675 5cd3fd84a08551c25f5d7d5c4840dba0 613 PRINTS PR00315 GTP-binding elongation factor signature 54 64 1.3E-7 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM378_19675 5cd3fd84a08551c25f5d7d5c4840dba0 613 PRINTS PR00315 GTP-binding elongation factor signature 70 81 1.3E-7 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM378_19675 5cd3fd84a08551c25f5d7d5c4840dba0 613 PRINTS PR00315 GTP-binding elongation factor signature 2 15 1.3E-7 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM378_19675 5cd3fd84a08551c25f5d7d5c4840dba0 613 PRINTS PR00315 GTP-binding elongation factor signature 107 116 1.3E-7 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM378_19675 5cd3fd84a08551c25f5d7d5c4840dba0 613 TIGRFAM TIGR00475 selB: selenocysteine-specific translation elongation factor 1 607 3.1E-213 T 15-10-2018 IPR004535 Translation elongation factor, selenocysteine-specific GO:0001514|GO:0003723|GO:0003746|GO:0005525|GO:0005737 AM378_19675 5cd3fd84a08551c25f5d7d5c4840dba0 613 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 26 41 - T 15-10-2018 IPR031157 Tr-type G domain, conserved site AM378_19675 5cd3fd84a08551c25f5d7d5c4840dba0 613 SUPERFAMILY SSF50465 273 350 8.63E-9 T 15-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal AM378_13150 1523afbdc9ece2cff65574da9f97bfad 120 ProDom PD015842 PTS IIA COMPONENT GLUCITOL/SORBITOL-SPECIFIC SYSTEM ENZYME TRANSFERASE SYSTEM PHOSPHOTRANSFERASE EIIA 6 118 4.0E-37 T 15-10-2018 IPR004716 Phosphotransferase system, glucitol/sorbitol-specific IIA component GO:0005737|GO:0008982|GO:0009401 AM378_13150 1523afbdc9ece2cff65574da9f97bfad 120 Gene3D G3DSA:2.40.33.40 2 120 2.2E-28 T 15-10-2018 IPR036665 Phosphotransferase system, glucitol/sorbitol-specific IIA component superfamily GO:0005737|GO:0008982|GO:0009401 AM378_13150 1523afbdc9ece2cff65574da9f97bfad 120 Pfam PF03829 PTS system glucitol/sorbitol-specific IIA component 4 115 8.6E-38 T 15-10-2018 IPR004716 Phosphotransferase system, glucitol/sorbitol-specific IIA component GO:0005737|GO:0008982|GO:0009401 AM378_13150 1523afbdc9ece2cff65574da9f97bfad 120 SUPERFAMILY SSF141530 4 119 7.72E-37 T 15-10-2018 IPR036665 Phosphotransferase system, glucitol/sorbitol-specific IIA component superfamily GO:0005737|GO:0008982|GO:0009401 AM378_03980 0c0cb05245291427dc246214a2a33c26 538 Gene3D G3DSA:3.40.605.10 51 525 1.1E-194 T 15-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 AM378_03980 0c0cb05245291427dc246214a2a33c26 538 Pfam PF00171 Aldehyde dehydrogenase family 40 464 1.6E-46 T 15-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 AM378_03980 0c0cb05245291427dc246214a2a33c26 538 SUPERFAMILY SSF53720 33 525 2.88E-94 T 15-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 AM378_03980 0c0cb05245291427dc246214a2a33c26 538 Gene3D G3DSA:3.40.309.10 272 460 1.1E-194 T 15-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 AM378_14745 de835f4b95432b69ed1810e4ae9bcc6d 306 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 67 3.0E-18 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_14745 de835f4b95432b69ed1810e4ae9bcc6d 306 Gene3D G3DSA:3.40.190.290 95 299 5.2E-60 T 15-10-2018 AM378_14745 de835f4b95432b69ed1810e4ae9bcc6d 306 SUPERFAMILY SSF46785 9 114 4.23E-21 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM378_14745 de835f4b95432b69ed1810e4ae9bcc6d 306 Gene3D G3DSA:1.10.10.10 7 94 1.4E-24 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_14745 de835f4b95432b69ed1810e4ae9bcc6d 306 Pfam PF03466 LysR substrate binding domain 92 296 6.5E-43 T 15-10-2018 IPR005119 LysR, substrate-binding AM378_14745 de835f4b95432b69ed1810e4ae9bcc6d 306 SUPERFAMILY SSF53850 93 302 1.3E-45 T 15-10-2018 AM378_01535 28fa19ba6b4a925914305c1980725d11 179 Pfam PF13420 Acetyltransferase (GNAT) domain 12 166 1.1E-19 T 15-10-2018 AM378_01535 28fa19ba6b4a925914305c1980725d11 179 Gene3D G3DSA:3.40.630.30 5 175 3.9E-49 T 15-10-2018 AM378_01535 28fa19ba6b4a925914305c1980725d11 179 SUPERFAMILY SSF55729 12 172 1.32E-27 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase AM378_16035 2518f646065607b7c9c9f5d265045be4 435 SUPERFAMILY SSF55154 1 218 1.8E-52 T 15-10-2018 IPR033469 CYTH-like domain superfamily Reactome: R-HSA-196819 AM378_16035 2518f646065607b7c9c9f5d265045be4 435 Gene3D G3DSA:2.40.320.10 1 200 5.6E-36 T 15-10-2018 AM378_16035 2518f646065607b7c9c9f5d265045be4 435 Pfam PF01928 CYTH domain 4 196 5.3E-32 T 15-10-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 AM378_16035 2518f646065607b7c9c9f5d265045be4 435 SMART SM01118 2 202 1.2E-38 T 15-10-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 AM378_11990 4f830623e71c2fabf830333ed8ea2816 306 SUPERFAMILY SSF103481 36 139 1.57E-10 T 15-10-2018 AM378_11990 4f830623e71c2fabf830333ed8ea2816 306 Pfam PF00892 EamA-like transporter family 150 280 1.0E-20 T 15-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AM378_11990 4f830623e71c2fabf830333ed8ea2816 306 Pfam PF00892 EamA-like transporter family 4 135 1.5E-19 T 15-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AM378_11990 4f830623e71c2fabf830333ed8ea2816 306 SUPERFAMILY SSF103481 186 283 1.44E-12 T 15-10-2018 AM378_23490 795497f4a4d513ca3a8da73ddd71bf37 417 Pfam PF01546 Peptidase family M20/M25/M40 80 408 1.4E-25 T 15-10-2018 IPR002933 Peptidase M20 GO:0016787 AM378_23490 795497f4a4d513ca3a8da73ddd71bf37 417 SUPERFAMILY SSF55031 216 331 8.02E-28 T 15-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain AM378_23490 795497f4a4d513ca3a8da73ddd71bf37 417 SUPERFAMILY SSF53187 10 411 1.4E-78 T 15-10-2018 AM378_23490 795497f4a4d513ca3a8da73ddd71bf37 417 Pfam PF07687 Peptidase dimerisation domain 215 313 1.6E-5 T 15-10-2018 IPR011650 Peptidase M20, dimerisation domain AM378_23490 795497f4a4d513ca3a8da73ddd71bf37 417 Gene3D G3DSA:3.40.630.10 27 403 2.3E-137 T 15-10-2018 AM378_23490 795497f4a4d513ca3a8da73ddd71bf37 417 Gene3D G3DSA:3.30.70.360 216 330 2.3E-137 T 15-10-2018 AM378_23490 795497f4a4d513ca3a8da73ddd71bf37 417 PIRSF PIRSF001235 6 415 9.2E-132 T 15-10-2018 IPR010158 Amidase, carbamoylase-type GO:0016813 AM378_23490 795497f4a4d513ca3a8da73ddd71bf37 417 TIGRFAM TIGR01879 hydantase: amidase, hydantoinase/carbamoylase family 17 403 1.6E-116 T 15-10-2018 IPR010158 Amidase, carbamoylase-type GO:0016813 AM378_23490 795497f4a4d513ca3a8da73ddd71bf37 417 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 79 88 - T 15-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 AM378_21265 81cfd86d6437533cd5f5bf9958a84a7d 85 ProSitePatterns PS00831 Ribosomal protein L27 signature. 34 48 - T 15-10-2018 IPR018261 Ribosomal protein L27, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM378_21265 81cfd86d6437533cd5f5bf9958a84a7d 85 ProDom PD003114 RIBOSOMAL L27 50S RIBONUCLEOPROTEIN CHLOROPLAST MITOCHONDRIAL PEPTIDE 60S TRANSIT PRECURSOR 28 71 1.0E-17 T 15-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM378_21265 81cfd86d6437533cd5f5bf9958a84a7d 85 PRINTS PR00063 Ribosomal protein L27 signature 29 53 1.1E-38 T 15-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM378_21265 81cfd86d6437533cd5f5bf9958a84a7d 85 PRINTS PR00063 Ribosomal protein L27 signature 54 78 1.1E-38 T 15-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM378_21265 81cfd86d6437533cd5f5bf9958a84a7d 85 PRINTS PR00063 Ribosomal protein L27 signature 4 28 1.1E-38 T 15-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM378_21265 81cfd86d6437533cd5f5bf9958a84a7d 85 Gene3D G3DSA:2.40.50.100 21 85 4.2E-31 T 15-10-2018 AM378_21265 81cfd86d6437533cd5f5bf9958a84a7d 85 SUPERFAMILY SSF110324 2 79 3.49E-34 T 15-10-2018 AM378_21265 81cfd86d6437533cd5f5bf9958a84a7d 85 Hamap MF_00539 50S ribosomal protein L27 [rpmA]. 1 85 29.053 T 15-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM378_21265 81cfd86d6437533cd5f5bf9958a84a7d 85 Pfam PF01016 Ribosomal L27 protein 2 82 4.8E-39 T 15-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM378_21265 81cfd86d6437533cd5f5bf9958a84a7d 85 TIGRFAM TIGR00062 L27: ribosomal protein bL27 1 82 2.6E-43 T 15-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM378_16075 83b8934aab5b0f573171797dcec85b58 582 Pfam PF01807 CHC2 zinc finger 7 100 1.4E-40 T 15-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 AM378_16075 83b8934aab5b0f573171797dcec85b58 582 SUPERFAMILY SSF57783 4 100 2.38E-35 T 15-10-2018 AM378_16075 83b8934aab5b0f573171797dcec85b58 582 Hamap MF_00974 DNA primase [dnaG]. 4 579 30.472 T 15-10-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 AM378_16075 83b8934aab5b0f573171797dcec85b58 582 Gene3D G3DSA:3.90.580.10 1 101 1.1E-37 T 15-10-2018 IPR036977 DNA Primase, CHC2-type zinc finger GO:0003677|GO:0006260|GO:0008270 AM378_16075 83b8934aab5b0f573171797dcec85b58 582 Gene3D G3DSA:1.20.50.20 368 426 2.4E-28 T 15-10-2018 AM378_16075 83b8934aab5b0f573171797dcec85b58 582 Pfam PF08278 DNA primase DnaG DnaB-binding 451 574 6.9E-35 T 15-10-2018 IPR013173 DNA primase DnaG, DnaB-binding domain GO:0003896|GO:0006269 AM378_16075 83b8934aab5b0f573171797dcec85b58 582 Gene3D G3DSA:3.90.980.10 115 240 2.5E-47 T 15-10-2018 IPR037068 DNA primase, catalytic core, N-terminal domain superfamily AM378_16075 83b8934aab5b0f573171797dcec85b58 582 SMART SM00400 36 90 2.2E-36 T 15-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 AM378_16075 83b8934aab5b0f573171797dcec85b58 582 Pfam PF13155 Toprim-like 263 348 1.6E-14 T 15-10-2018 AM378_16075 83b8934aab5b0f573171797dcec85b58 582 Pfam PF08275 DNA primase catalytic core, N-terminal domain 126 251 3.9E-43 T 15-10-2018 IPR013264 DNA primase, catalytic core, N-terminal AM378_16075 83b8934aab5b0f573171797dcec85b58 582 SUPERFAMILY SSF56731 115 427 9.59E-115 T 15-10-2018 AM378_16075 83b8934aab5b0f573171797dcec85b58 582 SMART SM00493 259 330 3.0E-22 T 15-10-2018 IPR006171 TOPRIM domain AM378_16075 83b8934aab5b0f573171797dcec85b58 582 TIGRFAM TIGR01391 dnaG: DNA primase 4 419 6.3E-151 T 15-10-2018 IPR006295 DNA primase, DnaG GO:0003896|GO:0006269 AM378_16075 83b8934aab5b0f573171797dcec85b58 582 SUPERFAMILY SSF117023 447 578 9.42E-44 T 15-10-2018 AM378_16075 83b8934aab5b0f573171797dcec85b58 582 SMART SM00766 450 575 3.5E-51 T 15-10-2018 IPR013173 DNA primase DnaG, DnaB-binding domain GO:0003896|GO:0006269 AM378_16075 83b8934aab5b0f573171797dcec85b58 582 Gene3D G3DSA:3.40.1360.10 241 367 4.2E-45 T 15-10-2018 AM378_16075 83b8934aab5b0f573171797dcec85b58 582 Pfam PF10410 DnaB-helicase binding domain of primase 370 424 2.1E-12 T 15-10-2018 IPR019475 DNA primase, DnaB-helicase binding domain GO:0016779 AM378_16075 83b8934aab5b0f573171797dcec85b58 582 Gene3D G3DSA:1.10.860.10 434 581 1.8E-52 T 15-10-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal AM378_16075 83b8934aab5b0f573171797dcec85b58 582 PIRSF PIRSF002811 2 582 3.9E-147 T 15-10-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 AM378_15640 1aa805f1f54d0be68b9d3f342166b02b 381 SMART SM00525 207 227 2.9E-4 T 15-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 AM378_15640 1aa805f1f54d0be68b9d3f342166b02b 381 SUPERFAMILY SSF55811 236 361 3.24E-23 T 15-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 AM378_15640 1aa805f1f54d0be68b9d3f342166b02b 381 SUPERFAMILY SSF48150 18 241 5.81E-78 T 15-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 AM378_15640 1aa805f1f54d0be68b9d3f342166b02b 381 Gene3D G3DSA:3.90.79.10 239 365 1.1E-11 T 15-10-2018 AM378_15640 1aa805f1f54d0be68b9d3f342166b02b 381 Gene3D G3DSA:1.10.340.30 37 148 3.7E-89 T 15-10-2018 AM378_15640 1aa805f1f54d0be68b9d3f342166b02b 381 Pfam PF14815 NUDIX domain 249 359 1.0E-22 T 15-10-2018 IPR029119 MutY, C-terminal Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 AM378_15640 1aa805f1f54d0be68b9d3f342166b02b 381 Pfam PF00633 Helix-hairpin-helix motif 116 143 9.5E-8 T 15-10-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 AM378_15640 1aa805f1f54d0be68b9d3f342166b02b 381 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 208 224 - T 15-10-2018 IPR004035 Endonuclease III, iron-sulphur binding site Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 AM378_15640 1aa805f1f54d0be68b9d3f342166b02b 381 SMART SM00478 55 206 1.8E-52 T 15-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 AM378_15640 1aa805f1f54d0be68b9d3f342166b02b 381 Pfam PF10576 Iron-sulfur binding domain of endonuclease III 208 224 4.7E-4 T 15-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 AM378_15640 1aa805f1f54d0be68b9d3f342166b02b 381 Gene3D G3DSA:1.10.1670.10 26 226 3.7E-89 T 15-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 AM378_15640 1aa805f1f54d0be68b9d3f342166b02b 381 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 52 184 4.5E-22 T 15-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 AM378_15640 1aa805f1f54d0be68b9d3f342166b02b 381 TIGRFAM TIGR01084 mutY: A/G-specific adenine glycosylase 21 292 1.0E-124 T 15-10-2018 IPR005760 A/G-specific adenine glycosylase MutY GO:0006284|GO:0019104 AM378_15640 1aa805f1f54d0be68b9d3f342166b02b 381 ProSitePatterns PS01155 Endonuclease III family signature. 118 147 - T 15-10-2018 IPR004036 Endonuclease III-like, conserved site-2 Reactome: R-HSA-110357 AM378_22595 c54427ff5987103d0f4c01168e646f33 1074 SUPERFAMILY SSF56059 128 401 3.18E-109 T 15-10-2018 AM378_22595 c54427ff5987103d0f4c01168e646f33 1074 Gene3D G3DSA:3.40.50.20 554 663 1.9E-50 T 15-10-2018 AM378_22595 c54427ff5987103d0f4c01168e646f33 1074 SUPERFAMILY SSF52335 938 1071 1.7E-34 T 15-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily AM378_22595 c54427ff5987103d0f4c01168e646f33 1074 Hamap MF_01210_B Carbamoyl-phosphate synthase large chain [carB]. 1 1063 13.192 T 15-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AM378_22595 c54427ff5987103d0f4c01168e646f33 1074 Gene3D G3DSA:1.10.1030.10 404 553 3.2E-53 T 15-10-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AM378_22595 c54427ff5987103d0f4c01168e646f33 1074 SMART SM00851 956 1042 4.9E-30 T 15-10-2018 IPR011607 Methylglyoxal synthase-like domain AM378_22595 c54427ff5987103d0f4c01168e646f33 1074 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 839 846 - T 15-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AM378_22595 c54427ff5987103d0f4c01168e646f33 1074 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 674 876 2.2E-37 T 15-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AM378_22595 c54427ff5987103d0f4c01168e646f33 1074 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 128 334 1.1E-76 T 15-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AM378_22595 c54427ff5987103d0f4c01168e646f33 1074 Gene3D G3DSA:3.40.50.20 1 116 1.1E-50 T 15-10-2018 AM378_22595 c54427ff5987103d0f4c01168e646f33 1074 TIGRFAM TIGR01369 CPSaseII_lrg: carbamoyl-phosphate synthase, large subunit 2 1053 0.0 T 15-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AM378_22595 c54427ff5987103d0f4c01168e646f33 1074 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 710 724 - T 15-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AM378_22595 c54427ff5987103d0f4c01168e646f33 1074 SUPERFAMILY SSF52440 557 676 6.33E-50 T 15-10-2018 IPR016185 Pre-ATP-grasp domain superfamily AM378_22595 c54427ff5987103d0f4c01168e646f33 1074 Pfam PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain 427 547 1.2E-39 T 15-10-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AM378_22595 c54427ff5987103d0f4c01168e646f33 1074 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 164 178 - T 15-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AM378_22595 c54427ff5987103d0f4c01168e646f33 1074 Gene3D G3DSA:3.30.470.20 119 403 3.0E-132 T 15-10-2018 AM378_22595 c54427ff5987103d0f4c01168e646f33 1074 Gene3D G3DSA:3.40.50.1380 937 1073 7.0E-35 T 15-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily AM378_22595 c54427ff5987103d0f4c01168e646f33 1074 Gene3D G3DSA:3.30.470.20 666 936 1.4E-126 T 15-10-2018 AM378_22595 c54427ff5987103d0f4c01168e646f33 1074 SUPERFAMILY SSF56059 674 934 1.77E-104 T 15-10-2018 AM378_22595 c54427ff5987103d0f4c01168e646f33 1074 SUPERFAMILY SSF48108 396 554 2.48E-52 T 15-10-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AM378_22595 c54427ff5987103d0f4c01168e646f33 1074 Pfam PF02142 MGS-like domain 957 1041 1.1E-17 T 15-10-2018 IPR011607 Methylglyoxal synthase-like domain AM378_22595 c54427ff5987103d0f4c01168e646f33 1074 Hamap MF_01210_A Carbamoyl-phosphate synthase large chain [carB]. 5 1068 13.364 T 15-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AM378_22595 c54427ff5987103d0f4c01168e646f33 1074 SUPERFAMILY SSF52440 1 127 5.61E-50 T 15-10-2018 IPR016185 Pre-ATP-grasp domain superfamily AM378_22595 c54427ff5987103d0f4c01168e646f33 1074 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 297 304 - T 15-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AM378_22595 c54427ff5987103d0f4c01168e646f33 1074 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 380 398 6.4E-64 T 15-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AM378_22595 c54427ff5987103d0f4c01168e646f33 1074 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 297 326 6.4E-64 T 15-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AM378_22595 c54427ff5987103d0f4c01168e646f33 1074 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 19 33 6.4E-64 T 15-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AM378_22595 c54427ff5987103d0f4c01168e646f33 1074 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 48 58 6.4E-64 T 15-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AM378_22595 c54427ff5987103d0f4c01168e646f33 1074 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 204 223 6.4E-64 T 15-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AM378_22595 c54427ff5987103d0f4c01168e646f33 1074 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 239 256 6.4E-64 T 15-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AM378_22595 c54427ff5987103d0f4c01168e646f33 1074 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 168 180 6.4E-64 T 15-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AM378_22595 c54427ff5987103d0f4c01168e646f33 1074 SMART SM01096 424 547 1.4E-74 T 15-10-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AM378_21700 c9823f93ca6344e5a85319a5882ac911 443 Gene3D G3DSA:1.20.1250.20 30 246 9.4E-57 T 15-10-2018 AM378_21700 c9823f93ca6344e5a85319a5882ac911 443 Gene3D G3DSA:1.20.1250.20 250 442 5.2E-48 T 15-10-2018 AM378_21700 c9823f93ca6344e5a85319a5882ac911 443 SUPERFAMILY SSF103473 22 440 1.12E-38 T 15-10-2018 IPR036259 MFS transporter superfamily AM378_21700 c9823f93ca6344e5a85319a5882ac911 443 TIGRFAM TIGR00885 fucP: L-fucose:H+ symporter permease 34 436 1.6E-107 T 15-10-2018 IPR005275 L-fucose permease FucP GO:0015150|GO:0015756 AM378_21700 c9823f93ca6344e5a85319a5882ac911 443 Pfam PF07690 Major Facilitator Superfamily 37 403 2.3E-20 T 15-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM378_00460 cb3cb0327c0a48d7e2f03d19c8eeee63 555 Gene3D G3DSA:3.40.50.720 106 554 6.5E-186 T 15-10-2018 AM378_00460 cb3cb0327c0a48d7e2f03d19c8eeee63 555 Gene3D G3DSA:3.40.50.261 332 496 6.5E-186 T 15-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AM378_00460 cb3cb0327c0a48d7e2f03d19c8eeee63 555 Gene3D G3DSA:3.40.50.261 192 331 6.5E-186 T 15-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AM378_00460 cb3cb0327c0a48d7e2f03d19c8eeee63 555 Pfam PF00549 CoA-ligase 336 491 1.8E-47 T 15-10-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AM378_00460 cb3cb0327c0a48d7e2f03d19c8eeee63 555 SUPERFAMILY SSF52210 187 316 1.83E-16 T 15-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AM378_00460 cb3cb0327c0a48d7e2f03d19c8eeee63 555 SUPERFAMILY SSF52210 327 492 1.57E-7 T 15-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AM378_00460 cb3cb0327c0a48d7e2f03d19c8eeee63 555 Pfam PF02629 CoA binding domain 194 287 1.6E-9 T 15-10-2018 IPR003781 CoA-binding GO:0048037 AM378_00755 96ad822b6c7eda9d9acfe046a535ea8a 509 SUPERFAMILY SSF56317 216 488 2.35E-41 T 15-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily AM378_00755 96ad822b6c7eda9d9acfe046a535ea8a 509 Gene3D G3DSA:3.60.110.10 212 477 2.4E-12 T 15-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily AM378_00755 96ad822b6c7eda9d9acfe046a535ea8a 509 TIGRFAM TIGR00546 lnt: apolipoprotein N-acyltransferase 63 456 1.5E-106 T 15-10-2018 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 AM378_00755 96ad822b6c7eda9d9acfe046a535ea8a 509 Hamap MF_01148 Apolipoprotein N-acyltransferase [lnt]. 10 494 24.014 T 15-10-2018 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 AM378_00755 96ad822b6c7eda9d9acfe046a535ea8a 509 Pfam PF00795 Carbon-nitrogen hydrolase 224 475 7.5E-40 T 15-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 AM378_23925 7a0b939834e1d09347a51c54933fa300 260 Pfam PF08220 DeoR-like helix-turn-helix domain 9 63 1.2E-15 T 15-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AM378_23925 7a0b939834e1d09347a51c54933fa300 260 SUPERFAMILY SSF46785 7 62 4.5E-10 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM378_23925 7a0b939834e1d09347a51c54933fa300 260 SMART SM01134 74 235 3.2E-51 T 15-10-2018 AM378_23925 7a0b939834e1d09347a51c54933fa300 260 SMART SM00420 9 61 2.1E-13 T 15-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AM378_23925 7a0b939834e1d09347a51c54933fa300 260 Pfam PF00455 DeoR C terminal sensor domain 78 232 1.3E-38 T 15-10-2018 IPR014036 DeoR C-terminal sensor domain AM378_23925 7a0b939834e1d09347a51c54933fa300 260 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 41 59 2.1E-7 T 15-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AM378_23925 7a0b939834e1d09347a51c54933fa300 260 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 27 41 2.1E-7 T 15-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AM378_23925 7a0b939834e1d09347a51c54933fa300 260 Gene3D G3DSA:1.10.10.10 1 57 3.9E-6 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_23925 7a0b939834e1d09347a51c54933fa300 260 ProSitePatterns PS00894 DeoR-type HTH domain signature. 9 43 - T 15-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 AM378_23925 7a0b939834e1d09347a51c54933fa300 260 SUPERFAMILY SSF100950 78 233 1.59E-23 T 15-10-2018 IPR037171 NagB/RpiA transferase-like AM378_06485 133a5dd489f2e2b4ef74bbf4ab1d22b1 389 Gene3D G3DSA:2.60.120.10 54 370 3.0E-136 T 15-10-2018 IPR014710 RmlC-like jelly roll fold AM378_06485 133a5dd489f2e2b4ef74bbf4ab1d22b1 389 Pfam PF00190 Cupin 66 189 5.7E-20 T 15-10-2018 IPR006045 Cupin 1 GO:0045735 AM378_06485 133a5dd489f2e2b4ef74bbf4ab1d22b1 389 Pfam PF00190 Cupin 234 367 1.0E-23 T 15-10-2018 IPR006045 Cupin 1 GO:0045735 AM378_06485 133a5dd489f2e2b4ef74bbf4ab1d22b1 389 SMART SM00835 233 375 1.1E-24 T 15-10-2018 IPR006045 Cupin 1 GO:0045735 AM378_06485 133a5dd489f2e2b4ef74bbf4ab1d22b1 389 SMART SM00835 54 197 4.7E-21 T 15-10-2018 IPR006045 Cupin 1 GO:0045735 AM378_06485 133a5dd489f2e2b4ef74bbf4ab1d22b1 389 Gene3D G3DSA:2.60.120.10 60 234 3.0E-136 T 15-10-2018 IPR014710 RmlC-like jelly roll fold AM378_06485 133a5dd489f2e2b4ef74bbf4ab1d22b1 389 TIGRFAM TIGR03404 bicupin_oxalic: bicupin, oxalate decarboxylase family 30 382 7.0E-122 T 15-10-2018 IPR017774 Bicupin, oxalate decarboxylase/oxidase GO:0033609 KEGG: 00630+4.1.1.2|MetaCyc: PWY-6698 AM378_06485 133a5dd489f2e2b4ef74bbf4ab1d22b1 389 SUPERFAMILY SSF51182 43 380 2.43E-87 T 15-10-2018 IPR011051 RmlC-like cupin domain superfamily AM378_06485 133a5dd489f2e2b4ef74bbf4ab1d22b1 389 Pfam PF10518 TAT (twin-arginine translocation) pathway signal sequence 1 20 4.0E-5 T 15-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal AM378_17510 f8dac1c557d023b0b5dfdfbd193dce1b 110 SUPERFAMILY SSF54843 1 109 1.57E-42 T 15-10-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 AM378_17510 f8dac1c557d023b0b5dfdfbd193dce1b 110 Hamap MF_01331_B 50S ribosomal protein L22 [rplV]. 1 110 28.807 T 15-10-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM378_17510 f8dac1c557d023b0b5dfdfbd193dce1b 110 ProSitePatterns PS00464 Ribosomal protein L22 signature. 83 107 - T 15-10-2018 IPR018260 Ribosomal protein L22/L17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM378_17510 f8dac1c557d023b0b5dfdfbd193dce1b 110 TIGRFAM TIGR01044 rplV_bact: ribosomal protein uL22 5 107 1.5E-50 T 15-10-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM378_17510 f8dac1c557d023b0b5dfdfbd193dce1b 110 Pfam PF00237 Ribosomal protein L22p/L17e 5 107 8.3E-38 T 15-10-2018 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 AM378_17510 f8dac1c557d023b0b5dfdfbd193dce1b 110 Gene3D G3DSA:3.90.470.10 1 110 2.4E-46 T 15-10-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 AM378_06895 067cc3bb3b2e5abbf0dc4b027d233487 427 SUPERFAMILY SSF51604 140 425 1.03E-113 T 15-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily AM378_06895 067cc3bb3b2e5abbf0dc4b027d233487 427 SUPERFAMILY SSF54826 5 137 9.72E-50 T 15-10-2018 AM378_06895 067cc3bb3b2e5abbf0dc4b027d233487 427 Hamap MF_00318 Enolase [eno]. 3 412 41.429 T 15-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AM378_06895 067cc3bb3b2e5abbf0dc4b027d233487 427 SMART SM01192 139 426 1.3E-191 T 15-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AM378_06895 067cc3bb3b2e5abbf0dc4b027d233487 427 SMART SM01193 5 134 6.0E-78 T 15-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AM378_06895 067cc3bb3b2e5abbf0dc4b027d233487 427 Gene3D G3DSA:3.20.20.120 129 427 9.3E-122 T 15-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily AM378_06895 067cc3bb3b2e5abbf0dc4b027d233487 427 Pfam PF00113 Enolase, C-terminal TIM barrel domain 141 425 9.2E-114 T 15-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AM378_06895 067cc3bb3b2e5abbf0dc4b027d233487 427 PRINTS PR00148 Enolase signature 312 323 1.3E-40 T 15-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AM378_06895 067cc3bb3b2e5abbf0dc4b027d233487 427 PRINTS PR00148 Enolase signature 335 349 1.3E-40 T 15-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AM378_06895 067cc3bb3b2e5abbf0dc4b027d233487 427 PRINTS PR00148 Enolase signature 364 381 1.3E-40 T 15-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AM378_06895 067cc3bb3b2e5abbf0dc4b027d233487 427 PRINTS PR00148 Enolase signature 107 123 1.3E-40 T 15-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AM378_06895 067cc3bb3b2e5abbf0dc4b027d233487 427 PRINTS PR00148 Enolase signature 37 51 1.3E-40 T 15-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AM378_06895 067cc3bb3b2e5abbf0dc4b027d233487 427 PRINTS PR00148 Enolase signature 162 175 1.3E-40 T 15-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AM378_06895 067cc3bb3b2e5abbf0dc4b027d233487 427 Pfam PF03952 Enolase, N-terminal domain 5 134 1.5E-53 T 15-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AM378_06895 067cc3bb3b2e5abbf0dc4b027d233487 427 TIGRFAM TIGR01060 eno: phosphopyruvate hydratase 5 426 1.8E-181 T 15-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AM378_06895 067cc3bb3b2e5abbf0dc4b027d233487 427 Gene3D G3DSA:3.30.390.10 3 126 2.9E-49 T 15-10-2018 IPR029017 Enolase-like, N-terminal AM378_06895 067cc3bb3b2e5abbf0dc4b027d233487 427 PIRSF PIRSF001400 1 426 2.0E-174 T 15-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AM378_03680 377ff4882a80d599065e7852e92cb1a9 56 Gene3D G3DSA:1.10.10.620 1 56 2.3E-28 T 15-10-2018 IPR023200 Ribosome modulation factor domain superfamily AM378_03680 377ff4882a80d599065e7852e92cb1a9 56 Hamap MF_00919 Ribosome modulation factor [rmf]. 1 56 30.087 T 15-10-2018 IPR007040 Ribosome modulation factor AM378_03680 377ff4882a80d599065e7852e92cb1a9 56 ProDom PD051650 RIBOSOME MODULATION FACTOR E FACTOR-RELATED DIMERIZATION BIOGENESIS RIBOSOMES INVOLVED 70S 1 56 2.0E-20 T 15-10-2018 IPR007040 Ribosome modulation factor AM378_03680 377ff4882a80d599065e7852e92cb1a9 56 Pfam PF04957 Ribosome modulation factor 1 53 2.0E-30 T 15-10-2018 IPR007040 Ribosome modulation factor AM378_00220 8b8ba87c308c284a8ba738817fdac083 395 SUPERFAMILY SSF111369 54 302 1.57E-89 T 15-10-2018 AM378_00220 8b8ba87c308c284a8ba738817fdac083 395 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 42 378 1.9E-83 T 15-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AM378_00220 8b8ba87c308c284a8ba738817fdac083 395 Gene3D G3DSA:2.40.50.100 66 210 2.0E-113 T 15-10-2018 AM378_00220 8b8ba87c308c284a8ba738817fdac083 395 Gene3D G3DSA:1.10.287.470 101 174 2.0E-113 T 15-10-2018 AM378_00220 8b8ba87c308c284a8ba738817fdac083 395 Pfam PF00529 HlyD membrane-fusion protein of T1SS 296 362 1.9E-12 T 15-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AM378_00220 8b8ba87c308c284a8ba738817fdac083 395 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 65 295 1.5E-12 T 15-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AM378_00220 8b8ba87c308c284a8ba738817fdac083 395 Gene3D G3DSA:2.40.420.20 306 375 2.0E-113 T 15-10-2018 AM378_00220 8b8ba87c308c284a8ba738817fdac083 395 Gene3D G3DSA:2.40.30.170 54 305 2.0E-113 T 15-10-2018 AM378_22025 9e681020267e2c23d305c50360fa1171 446 Gene3D G3DSA:3.90.1150.10 31 437 3.1E-149 T 15-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AM378_22025 9e681020267e2c23d305c50360fa1171 446 SUPERFAMILY SSF53383 27 443 6.66E-114 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM378_22025 9e681020267e2c23d305c50360fa1171 446 Pfam PF00202 Aminotransferase class-III 32 442 5.0E-86 T 15-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AM378_22025 9e681020267e2c23d305c50360fa1171 446 PIRSF PIRSF000521 196 445 6.2E-17 T 15-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AM378_22025 9e681020267e2c23d305c50360fa1171 446 PIRSF PIRSF000521 34 151 4.2E-4 T 15-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AM378_22025 9e681020267e2c23d305c50360fa1171 446 Gene3D G3DSA:3.40.640.10 68 348 3.1E-149 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AM378_22025 9e681020267e2c23d305c50360fa1171 446 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 254 291 - T 15-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AM378_20105 382767145bb30fb4437ae6a17ddfe99b 313 Gene3D G3DSA:3.40.190.10 6 216 2.7E-84 T 15-10-2018 AM378_20105 382767145bb30fb4437ae6a17ddfe99b 313 Gene3D G3DSA:3.30.160.40 221 306 4.6E-31 T 15-10-2018 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AM378_20105 382767145bb30fb4437ae6a17ddfe99b 313 Gene3D G3DSA:3.40.190.10 100 199 2.7E-84 T 15-10-2018 AM378_20105 382767145bb30fb4437ae6a17ddfe99b 313 PIRSF PIRSF001438 1 311 1.0E-122 T 15-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AM378_20105 382767145bb30fb4437ae6a17ddfe99b 313 Pfam PF03900 Porphobilinogen deaminase, C-terminal domain 227 295 2.2E-22 T 15-10-2018 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AM378_20105 382767145bb30fb4437ae6a17ddfe99b 313 PRINTS PR00151 Porphobilinogen deaminase signature 76 95 3.1E-49 T 15-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AM378_20105 382767145bb30fb4437ae6a17ddfe99b 313 PRINTS PR00151 Porphobilinogen deaminase signature 45 65 3.1E-49 T 15-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AM378_20105 382767145bb30fb4437ae6a17ddfe99b 313 PRINTS PR00151 Porphobilinogen deaminase signature 230 247 3.1E-49 T 15-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AM378_20105 382767145bb30fb4437ae6a17ddfe99b 313 PRINTS PR00151 Porphobilinogen deaminase signature 124 141 3.1E-49 T 15-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AM378_20105 382767145bb30fb4437ae6a17ddfe99b 313 PRINTS PR00151 Porphobilinogen deaminase signature 143 160 3.1E-49 T 15-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AM378_20105 382767145bb30fb4437ae6a17ddfe99b 313 SUPERFAMILY SSF54782 220 309 1.22E-28 T 15-10-2018 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AM378_20105 382767145bb30fb4437ae6a17ddfe99b 313 ProSitePatterns PS00533 Porphobilinogen deaminase cofactor-binding site. 231 247 - T 15-10-2018 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site GO:0004418|GO:0018160|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AM378_20105 382767145bb30fb4437ae6a17ddfe99b 313 Hamap MF_00260 Porphobilinogen deaminase [hemC]. 5 297 39.605 T 15-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AM378_20105 382767145bb30fb4437ae6a17ddfe99b 313 TIGRFAM TIGR00212 hemC: hydroxymethylbilane synthase 6 297 1.7E-112 T 15-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AM378_20105 382767145bb30fb4437ae6a17ddfe99b 313 SUPERFAMILY SSF53850 5 218 8.58E-85 T 15-10-2018 AM378_20105 382767145bb30fb4437ae6a17ddfe99b 313 Pfam PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain 6 211 2.0E-78 T 15-10-2018 IPR022417 Porphobilinogen deaminase, N-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AM378_15655 432b69b7b8ef3ab2614743a972c1a613 721 SUPERFAMILY SSF55904 572 720 7.45E-47 T 15-10-2018 IPR036633 Orn/Lys/Arg decarboxylase, C-terminal domain superfamily GO:0003824 AM378_15655 432b69b7b8ef3ab2614743a972c1a613 721 Pfam PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain 4 104 2.0E-19 T 15-10-2018 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal GO:0016831 AM378_15655 432b69b7b8ef3ab2614743a972c1a613 721 ProSitePatterns PS00703 Orn/Lys/Arg decarboxylases family 1 pyridoxal-P attachment site. 351 365 - T 15-10-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 AM378_15655 432b69b7b8ef3ab2614743a972c1a613 721 Pfam PF01276 Orn/Lys/Arg decarboxylase, major domain 110 550 7.7E-194 T 15-10-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 AM378_15655 432b69b7b8ef3ab2614743a972c1a613 721 Gene3D G3DSA:3.90.1150.10 422 601 5.0E-72 T 15-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AM378_15655 432b69b7b8ef3ab2614743a972c1a613 721 TIGRFAM TIGR04301 ODC_inducible: ornithine decarboxylase SpeF 1 720 0.0 T 15-10-2018 IPR027568 Ornithine decarboxylase SpeF GO:0004586 KEGG: 00330+4.1.1.17|KEGG: 00480+4.1.1.17|MetaCyc: PWY-46|MetaCyc: PWY-6305 AM378_15655 432b69b7b8ef3ab2614743a972c1a613 721 PIRSF PIRSF009393 1 721 5.2E-290 T 15-10-2018 IPR011193 Ornithine/lysine/arginine decarboxylase GO:0005737|GO:0006520|GO:0016831 AM378_15655 432b69b7b8ef3ab2614743a972c1a613 721 Gene3D G3DSA:3.90.100.10 602 721 6.0E-42 T 15-10-2018 AM378_15655 432b69b7b8ef3ab2614743a972c1a613 721 SUPERFAMILY SSF53383 110 565 1.21E-119 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM378_15655 432b69b7b8ef3ab2614743a972c1a613 721 Gene3D G3DSA:3.40.50.220 1 109 9.8E-21 T 15-10-2018 IPR027464 Ornithine decarboxylase, N-terminal KEGG: 00330+4.1.1.17|KEGG: 00480+4.1.1.17|MetaCyc: PWY-46|MetaCyc: PWY-6305 AM378_15655 432b69b7b8ef3ab2614743a972c1a613 721 SUPERFAMILY SSF52172 1 109 3.83E-31 T 15-10-2018 IPR011006 CheY-like superfamily AM378_15655 432b69b7b8ef3ab2614743a972c1a613 721 Pfam PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain 577 706 2.5E-47 T 15-10-2018 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 AM378_15655 432b69b7b8ef3ab2614743a972c1a613 721 Gene3D G3DSA:3.40.640.10 110 420 2.7E-85 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AM378_07470 09c5ff4f31c96fbd71825b761649f738 434 SMART SM00345 14 73 2.6E-17 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM378_07470 09c5ff4f31c96fbd71825b761649f738 434 SUPERFAMILY SSF53383 86 428 7.47E-51 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM378_07470 09c5ff4f31c96fbd71825b761649f738 434 Pfam PF00392 Bacterial regulatory proteins, gntR family 12 73 1.1E-16 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM378_07470 09c5ff4f31c96fbd71825b761649f738 434 SUPERFAMILY SSF46785 4 84 8.52E-19 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM378_07470 09c5ff4f31c96fbd71825b761649f738 434 Gene3D G3DSA:3.40.640.10 92 421 8.3E-42 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AM378_07470 09c5ff4f31c96fbd71825b761649f738 434 Gene3D G3DSA:1.10.10.10 12 84 8.1E-20 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_07470 09c5ff4f31c96fbd71825b761649f738 434 Pfam PF00155 Aminotransferase class I and II 152 421 3.7E-18 T 15-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AM378_04130 1489b9f1b080967bc8f7cfb2bc03625c 167 Pfam PF10777 Inner membrane protein YlaC 1 153 1.2E-67 T 15-10-2018 IPR019713 Inner membrane protein YlaC AM378_15220 e81822e2c0099b94dba381036c92be90 440 Pfam PF05525 Branched-chain amino acid transport protein 8 429 2.8E-143 T 15-10-2018 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 AM378_15220 e81822e2c0099b94dba381036c92be90 440 TIGRFAM TIGR00796 livcs: branched-chain amino acid transport system II carrier protein 14 416 7.7E-143 T 15-10-2018 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 AM378_06240 793357dd1fbcb0d4c9246b2a66eb8efa 785 Gene3D G3DSA:2.170.130.10 139 264 1.5E-30 T 15-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily AM378_06240 793357dd1fbcb0d4c9246b2a66eb8efa 785 SUPERFAMILY SSF56935 126 785 7.02E-121 T 15-10-2018 AM378_06240 793357dd1fbcb0d4c9246b2a66eb8efa 785 Pfam PF00593 TonB dependent receptor 339 783 2.2E-49 T 15-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel AM378_06240 793357dd1fbcb0d4c9246b2a66eb8efa 785 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 143 785 3.9E-136 T 15-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 AM378_06240 793357dd1fbcb0d4c9246b2a66eb8efa 785 SMART SM00965 64 115 6.3E-13 T 15-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 AM378_06240 793357dd1fbcb0d4c9246b2a66eb8efa 785 Gene3D G3DSA:2.40.170.20 267 785 5.9E-145 T 15-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AM378_06240 793357dd1fbcb0d4c9246b2a66eb8efa 785 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 768 785 - T 15-10-2018 IPR010917 TonB-dependent receptor, conserved site AM378_06240 793357dd1fbcb0d4c9246b2a66eb8efa 785 Gene3D G3DSA:3.55.50.30 42 113 9.0E-27 T 15-10-2018 AM378_06240 793357dd1fbcb0d4c9246b2a66eb8efa 785 Pfam PF07715 TonB-dependent Receptor Plug Domain 142 255 7.0E-19 T 15-10-2018 IPR012910 TonB-dependent receptor, plug domain AM378_06240 793357dd1fbcb0d4c9246b2a66eb8efa 785 Pfam PF07660 Secretin and TonB N terminus short domain 70 114 3.0E-8 T 15-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 AM378_19560 d2e08077af81b35c983cb7575e1f0b5a 689 Pfam PF02092 Glycyl-tRNA synthetase beta subunit 6 551 3.2E-210 T 15-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AM378_19560 d2e08077af81b35c983cb7575e1f0b5a 689 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 318 334 6.7E-37 T 15-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AM378_19560 d2e08077af81b35c983cb7575e1f0b5a 689 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 50 62 6.7E-37 T 15-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AM378_19560 d2e08077af81b35c983cb7575e1f0b5a 689 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 394 413 6.7E-37 T 15-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AM378_19560 d2e08077af81b35c983cb7575e1f0b5a 689 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 246 261 6.7E-37 T 15-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AM378_19560 d2e08077af81b35c983cb7575e1f0b5a 689 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 7 20 6.7E-37 T 15-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AM378_19560 d2e08077af81b35c983cb7575e1f0b5a 689 SUPERFAMILY SSF109604 339 539 1.78E-15 T 15-10-2018 AM378_19560 d2e08077af81b35c983cb7575e1f0b5a 689 Pfam PF05746 DALR anticodon binding domain 582 679 2.6E-7 T 15-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 AM378_19560 d2e08077af81b35c983cb7575e1f0b5a 689 Hamap MF_00255 Glycine--tRNA ligase beta subunit [glyS]. 3 688 26.497 T 15-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AM378_19560 d2e08077af81b35c983cb7575e1f0b5a 689 TIGRFAM TIGR00211 glyS: glycine--tRNA ligase, beta subunit 1 689 0.0 T 15-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AM378_22680 0bc9a4fd83828995f6eb61bc67e4896b 788 Pfam PF03104 DNA polymerase family B, exonuclease domain 74 299 2.2E-10 T 15-10-2018 IPR006133 DNA-directed DNA polymerase, family B, exonuclease domain KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM378_22680 0bc9a4fd83828995f6eb61bc67e4896b 788 Gene3D G3DSA:2.40.50.590 7 151 2.1E-56 T 15-10-2018 AM378_22680 0bc9a4fd83828995f6eb61bc67e4896b 788 SUPERFAMILY SSF53098 5 392 8.93E-97 T 15-10-2018 IPR012337 Ribonuclease H-like superfamily AM378_22680 0bc9a4fd83828995f6eb61bc67e4896b 788 Gene3D G3DSA:3.30.420.10 154 350 3.8E-75 T 15-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AM378_22680 0bc9a4fd83828995f6eb61bc67e4896b 788 SMART SM00486 151 558 1.2E-65 T 15-10-2018 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM378_22680 0bc9a4fd83828995f6eb61bc67e4896b 788 Gene3D G3DSA:3.90.1600.10 446 637 1.2E-57 T 15-10-2018 IPR023211 DNA polymerase, palm domain superfamily KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM378_22680 0bc9a4fd83828995f6eb61bc67e4896b 788 Gene3D G3DSA:3.90.1600.10 351 445 9.2E-31 T 15-10-2018 IPR023211 DNA polymerase, palm domain superfamily KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM378_22680 0bc9a4fd83828995f6eb61bc67e4896b 788 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 418 431 3.6E-10 T 15-10-2018 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM378_22680 0bc9a4fd83828995f6eb61bc67e4896b 788 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 492 504 3.6E-10 T 15-10-2018 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM378_22680 0bc9a4fd83828995f6eb61bc67e4896b 788 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 544 552 3.6E-10 T 15-10-2018 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM378_22680 0bc9a4fd83828995f6eb61bc67e4896b 788 Pfam PF00136 DNA polymerase family B 381 741 2.1E-40 T 15-10-2018 IPR006134 DNA-directed DNA polymerase, family B, multifunctional domain GO:0000166|GO:0003677 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM378_22680 0bc9a4fd83828995f6eb61bc67e4896b 788 ProSitePatterns PS00116 DNA polymerase family B signature. 546 554 - T 15-10-2018 IPR017964 DNA-directed DNA polymerase, family B, conserved site GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM378_22680 0bc9a4fd83828995f6eb61bc67e4896b 788 Gene3D G3DSA:3.30.70.2250 42 108 2.1E-56 T 15-10-2018 AM378_22680 0bc9a4fd83828995f6eb61bc67e4896b 788 Gene3D G3DSA:1.10.132.60 644 788 6.7E-62 T 15-10-2018 AM378_22680 0bc9a4fd83828995f6eb61bc67e4896b 788 SUPERFAMILY SSF56672 388 782 2.78E-115 T 15-10-2018 AM378_17160 967ae3a00f6380817f9fe7e749b3aaad 323 SUPERFAMILY SSF51445 119 235 6.24E-15 T 15-10-2018 IPR017853 Glycoside hydrolase superfamily AM378_17160 967ae3a00f6380817f9fe7e749b3aaad 323 Gene3D G3DSA:3.20.20.80 11 51 6.8E-10 T 15-10-2018 AM378_17160 967ae3a00f6380817f9fe7e749b3aaad 323 SUPERFAMILY SSF51445 11 52 6.1E-7 T 15-10-2018 IPR017853 Glycoside hydrolase superfamily AM378_17160 967ae3a00f6380817f9fe7e749b3aaad 323 Pfam PF00128 Alpha amylase, catalytic domain 97 168 7.9E-5 T 15-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AM378_17160 967ae3a00f6380817f9fe7e749b3aaad 323 Gene3D G3DSA:3.20.20.80 56 241 9.6E-21 T 15-10-2018 AM378_06150 04e5f066641a9e26d9ecaafe2e4b35af 387 Pfam PF02638 Glycosyl hydrolase-like 10 1 335 1.2E-101 T 15-10-2018 IPR003790 Glycosyl hydrolase-like 10 AM378_06150 04e5f066641a9e26d9ecaafe2e4b35af 387 SUPERFAMILY SSF51445 31 313 4.66E-32 T 15-10-2018 IPR017853 Glycoside hydrolase superfamily AM378_06150 04e5f066641a9e26d9ecaafe2e4b35af 387 Gene3D G3DSA:3.20.20.70 83 217 9.5E-11 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM378_01435 df4a30e8474b4938ca54f3edc05e2488 343 Gene3D G3DSA:3.40.190.10 133 321 7.9E-123 T 15-10-2018 AM378_01435 df4a30e8474b4938ca54f3edc05e2488 343 PIRSF PIRSF002825 1 340 1.4E-73 T 15-10-2018 IPR026045 Ferric binding protein AM378_01435 df4a30e8474b4938ca54f3edc05e2488 343 SUPERFAMILY SSF53850 25 330 6.92E-73 T 15-10-2018 AM378_01435 df4a30e8474b4938ca54f3edc05e2488 343 Pfam PF13343 Bacterial extracellular solute-binding protein 75 284 7.0E-34 T 15-10-2018 AM378_01435 df4a30e8474b4938ca54f3edc05e2488 343 Gene3D G3DSA:3.40.190.10 31 306 7.9E-123 T 15-10-2018 AM378_22325 70a54f95c30506120aff58d8ba97e438 259 SMART SM01133 10 246 8.9E-82 T 15-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 AM378_22325 70a54f95c30506120aff58d8ba97e438 259 SUPERFAMILY SSF51569 6 245 1.67E-81 T 15-10-2018 AM378_22325 70a54f95c30506120aff58d8ba97e438 259 Gene3D G3DSA:3.20.20.70 1 250 1.3E-102 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM378_22325 70a54f95c30506120aff58d8ba97e438 259 Pfam PF01791 DeoC/LacD family aldolase 12 244 7.0E-47 T 15-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 AM378_22325 70a54f95c30506120aff58d8ba97e438 259 PIRSF PIRSF001357 5 255 1.6E-79 T 15-10-2018 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|Reactome: R-HSA-6798695|Reactome: R-HSA-71336 AM378_22325 70a54f95c30506120aff58d8ba97e438 259 TIGRFAM TIGR00126 deoC: deoxyribose-phosphate aldolase 11 232 1.7E-79 T 15-10-2018 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|Reactome: R-HSA-6798695|Reactome: R-HSA-71336 AM378_22325 70a54f95c30506120aff58d8ba97e438 259 Hamap MF_00592 Deoxyribose-phosphate aldolase [deoC]. 1 259 53.34 T 15-10-2018 IPR023649 Deoxyribose-phosphate aldolase type II GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180 AM378_00585 8153f5f86caf39d9f99b2ddc0457ddd0 169 SUPERFAMILY SSF54593 1 139 9.67E-27 T 15-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AM378_00585 8153f5f86caf39d9f99b2ddc0457ddd0 169 Gene3D G3DSA:3.10.180.10 1 152 6.9E-29 T 15-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AM378_00585 8153f5f86caf39d9f99b2ddc0457ddd0 169 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 135 1.4E-13 T 15-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AM378_17110 b08a338888fc0ea95e22e77f7f4f2878 122 Pfam PF01219 Prokaryotic diacylglycerol kinase 16 117 9.3E-35 T 15-10-2018 IPR000829 DAGK family GO:0008654|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 AM378_17110 b08a338888fc0ea95e22e77f7f4f2878 122 Gene3D G3DSA:1.10.3830.10 2 122 2.1E-42 T 15-10-2018 IPR036945 Diacylglycerol kinase (DAGK) superfamily GO:0008610|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 AM378_17110 b08a338888fc0ea95e22e77f7f4f2878 122 ProSitePatterns PS01069 Prokaryotic diacylglycerol kinase signature. 70 81 - T 15-10-2018 IPR000829 DAGK family GO:0008654|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 AM378_19620 ff2026a8874b72ee0d328aa9712a35c4 223 Pfam PF03475 3-alpha domain 168 211 1.1E-16 T 15-10-2018 IPR005163 3-alpha domain AM378_19620 ff2026a8874b72ee0d328aa9712a35c4 223 SUPERFAMILY SSF50800 5 222 5.75E-74 T 15-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily AM378_19620 ff2026a8874b72ee0d328aa9712a35c4 223 Pfam PF03473 MOSC domain 46 154 4.1E-21 T 15-10-2018 IPR005302 Molybdenum cofactor sulfurase, C-terminal GO:0003824|GO:0030151|GO:0030170 AM378_19620 ff2026a8874b72ee0d328aa9712a35c4 223 Gene3D G3DSA:2.40.33.20 1 223 5.8E-80 T 15-10-2018 AM378_02300 bb41e045824554b46cb9457ffcc0492b 304 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 172 291 1.1E-34 T 15-10-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 AM378_02300 bb41e045824554b46cb9457ffcc0492b 304 Gene3D G3DSA:3.40.50.720 5 170 6.2E-45 T 15-10-2018 AM378_02300 bb41e045824554b46cb9457ffcc0492b 304 SUPERFAMILY SSF48179 171 293 4.08E-36 T 15-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 AM378_02300 bb41e045824554b46cb9457ffcc0492b 304 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 11 24 - T 15-10-2018 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 Reactome: R-HSA-70895 AM378_02300 bb41e045824554b46cb9457ffcc0492b 304 Gene3D G3DSA:1.10.1040.10 172 295 3.2E-40 T 15-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AM378_02300 bb41e045824554b46cb9457ffcc0492b 304 PIRSF PIRSF000103 1 297 5.1E-63 T 15-10-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 AM378_02300 bb41e045824554b46cb9457ffcc0492b 304 SUPERFAMILY SSF51735 9 168 3.38E-34 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily AM378_02300 bb41e045824554b46cb9457ffcc0492b 304 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 9 166 3.1E-39 T 15-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 AM378_06575 308b3434647f42ff6d44f92ca92eeb3e 305 SUPERFAMILY SSF103481 36 138 2.22E-13 T 15-10-2018 AM378_06575 308b3434647f42ff6d44f92ca92eeb3e 305 Pfam PF00892 EamA-like transporter family 4 135 1.1E-10 T 15-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AM378_06575 308b3434647f42ff6d44f92ca92eeb3e 305 Pfam PF00892 EamA-like transporter family 162 286 8.7E-15 T 15-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AM378_06575 308b3434647f42ff6d44f92ca92eeb3e 305 SUPERFAMILY SSF103481 192 289 1.22E-9 T 15-10-2018 AM378_04980 77d1831d3e7fd9669e89b739f31cad20 254 Gene3D G3DSA:3.40.1410.10 100 254 4.2E-39 T 15-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily AM378_04980 77d1831d3e7fd9669e89b739f31cad20 254 SMART SM00345 29 88 2.1E-13 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM378_04980 77d1831d3e7fd9669e89b739f31cad20 254 Pfam PF00392 Bacterial regulatory proteins, gntR family 26 88 8.0E-15 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM378_04980 77d1831d3e7fd9669e89b739f31cad20 254 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 62 78 3.2E-9 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM378_04980 77d1831d3e7fd9669e89b739f31cad20 254 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 48 62 3.2E-9 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM378_04980 77d1831d3e7fd9669e89b739f31cad20 254 SMART SM00866 113 249 3.3E-33 T 15-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 AM378_04980 77d1831d3e7fd9669e89b739f31cad20 254 SUPERFAMILY SSF46785 21 95 3.08E-18 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM378_04980 77d1831d3e7fd9669e89b739f31cad20 254 SUPERFAMILY SSF64288 76 253 6.44E-41 T 15-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily AM378_04980 77d1831d3e7fd9669e89b739f31cad20 254 Pfam PF07702 UTRA domain 113 248 9.9E-34 T 15-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 AM378_04980 77d1831d3e7fd9669e89b739f31cad20 254 Gene3D G3DSA:1.10.10.10 23 92 3.2E-19 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_23895 29e18d036217cc68a14644c3cdc1092b 559 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 4 175 2.2E-34 T 15-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 AM378_23895 29e18d036217cc68a14644c3cdc1092b 559 SUPERFAMILY SSF52467 165 341 5.18E-27 T 15-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily AM378_23895 29e18d036217cc68a14644c3cdc1092b 559 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 417 436 - T 15-10-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 AM378_23895 29e18d036217cc68a14644c3cdc1092b 559 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 200 322 4.6E-20 T 15-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 AM378_23895 29e18d036217cc68a14644c3cdc1092b 559 SUPERFAMILY SSF52518 356 541 6.71E-44 T 15-10-2018 IPR029061 Thiamin diphosphate-binding fold AM378_23895 29e18d036217cc68a14644c3cdc1092b 559 Gene3D G3DSA:3.40.50.970 1 180 2.4E-68 T 15-10-2018 AM378_23895 29e18d036217cc68a14644c3cdc1092b 559 Gene3D G3DSA:3.40.50.970 349 542 2.0E-54 T 15-10-2018 AM378_23895 29e18d036217cc68a14644c3cdc1092b 559 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 397 527 6.5E-17 T 15-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 AM378_23895 29e18d036217cc68a14644c3cdc1092b 559 SUPERFAMILY SSF52518 2 176 2.67E-39 T 15-10-2018 IPR029061 Thiamin diphosphate-binding fold AM378_23895 29e18d036217cc68a14644c3cdc1092b 559 Gene3D G3DSA:3.40.50.1220 186 340 1.6E-33 T 15-10-2018 AM378_23895 29e18d036217cc68a14644c3cdc1092b 559 PIRSF PIRSF036565 1 549 1.3E-181 T 15-10-2018 IPR012110 Thiamine pyrophosphate (TPP)-dependent enzyme GO:0016831 AM378_15010 6d5c28f3ee4d2dbc42d574fd07416762 321 Gene3D G3DSA:3.90.180.10 1 119 8.0E-11 T 15-10-2018 AM378_15010 6d5c28f3ee4d2dbc42d574fd07416762 321 SUPERFAMILY SSF51735 102 283 3.32E-21 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily AM378_15010 6d5c28f3ee4d2dbc42d574fd07416762 321 SUPERFAMILY SSF50129 1 136 6.23E-20 T 15-10-2018 IPR011032 GroES-like superfamily AM378_15010 6d5c28f3ee4d2dbc42d574fd07416762 321 SMART SM00829 10 291 0.0014 T 15-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AM378_15010 6d5c28f3ee4d2dbc42d574fd07416762 321 Gene3D G3DSA:3.40.50.720 120 280 5.9E-32 T 15-10-2018 AM378_05650 a17047fd2ae3fd60a4e1466e9f58ac40 348 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 5 348 3.9E-170 T 15-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 AM378_05650 a17047fd2ae3fd60a4e1466e9f58ac40 348 SUPERFAMILY SSF51569 7 347 5.13E-131 T 15-10-2018 AM378_05650 a17047fd2ae3fd60a4e1466e9f58ac40 348 PIRSF PIRSF001361 1 348 1.6E-155 T 15-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 AM378_05650 a17047fd2ae3fd60a4e1466e9f58ac40 348 Gene3D G3DSA:3.20.20.70 1 348 7.8E-153 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM378_05650 a17047fd2ae3fd60a4e1466e9f58ac40 348 Pfam PF00793 DAHP synthetase I family 41 337 1.6E-103 T 15-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 AM378_06635 78a9e982a43c04f378c6eac0905109dd 478 SUPERFAMILY SSF58104 141 475 1.31E-48 T 15-10-2018 AM378_06635 78a9e982a43c04f378c6eac0905109dd 478 SUPERFAMILY SSF47170 47 198 3.14E-36 T 15-10-2018 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily AM378_06635 78a9e982a43c04f378c6eac0905109dd 478 Gene3D G3DSA:1.20.120.30 44 209 2.5E-42 T 15-10-2018 AM378_06635 78a9e982a43c04f378c6eac0905109dd 478 Pfam PF02203 Tar ligand binding domain homologue 27 193 1.5E-32 T 15-10-2018 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding GO:0006935|GO:0007165 AM378_06635 78a9e982a43c04f378c6eac0905109dd 478 SMART SM00319 66 200 1.6E-8 T 15-10-2018 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding GO:0006935|GO:0007165 AM378_06635 78a9e982a43c04f378c6eac0905109dd 478 Gene3D G3DSA:1.10.287.950 237 476 2.5E-53 T 15-10-2018 AM378_06635 78a9e982a43c04f378c6eac0905109dd 478 SMART SM00283 227 474 2.4E-46 T 15-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AM378_06635 78a9e982a43c04f378c6eac0905109dd 478 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 287 441 4.9E-36 T 15-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AM378_04190 4f7311cbeef3853bd1659b34507c571d 105 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 64 79 5.9E-13 T 15-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AM378_04190 4f7311cbeef3853bd1659b34507c571d 105 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 49 64 5.9E-13 T 15-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AM378_04190 4f7311cbeef3853bd1659b34507c571d 105 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 17 32 5.9E-13 T 15-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AM378_04190 4f7311cbeef3853bd1659b34507c571d 105 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 36 47 5.9E-13 T 15-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AM378_04190 4f7311cbeef3853bd1659b34507c571d 105 SMART SM00418 15 93 8.3E-24 T 15-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AM378_04190 4f7311cbeef3853bd1659b34507c571d 105 Pfam PF01022 Bacterial regulatory protein, arsR family 23 67 5.0E-14 T 15-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AM378_04190 4f7311cbeef3853bd1659b34507c571d 105 SUPERFAMILY SSF46785 11 96 5.92E-24 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM378_04190 4f7311cbeef3853bd1659b34507c571d 105 Gene3D G3DSA:1.10.10.10 2 102 1.1E-25 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_18445 e0403fe927d9e82408ccb7fffe478379 162 Gene3D G3DSA:1.20.120.1490 36 145 6.1E-34 T 15-10-2018 AM378_18445 e0403fe927d9e82408ccb7fffe478379 162 PIRSF PIRSF034445 1 158 4.9E-29 T 15-10-2018 IPR012899 LTXXQ motif family protein GO:0042597 AM378_18445 e0403fe927d9e82408ccb7fffe478379 162 Pfam PF07813 LTXXQ motif family protein 48 139 4.1E-19 T 15-10-2018 IPR012899 LTXXQ motif family protein GO:0042597 AM378_02810 6487645b4794cad44adb82c93c8968ae 443 Gene3D G3DSA:2.40.50.100 63 95 1.1E-8 T 15-10-2018 AM378_02810 6487645b4794cad44adb82c93c8968ae 443 Gene3D G3DSA:2.40.50.100 295 331 2.8E-11 T 15-10-2018 AM378_02810 6487645b4794cad44adb82c93c8968ae 443 Gene3D G3DSA:1.10.287.470 96 126 1.1E-8 T 15-10-2018 AM378_02810 6487645b4794cad44adb82c93c8968ae 443 Gene3D G3DSA:1.10.287.470 243 294 2.8E-11 T 15-10-2018 AM378_02810 6487645b4794cad44adb82c93c8968ae 443 SUPERFAMILY SSF111369 62 129 3.53E-6 T 15-10-2018 AM378_02810 6487645b4794cad44adb82c93c8968ae 443 Gene3D G3DSA:2.40.30.170 332 416 2.8E-11 T 15-10-2018 AM378_02810 6487645b4794cad44adb82c93c8968ae 443 ProSitePatterns PS00543 HlyD family secretion proteins signature. 407 429 - T 15-10-2018 IPR006144 Secretion protein HlyD, conserved site GO:0008565|GO:0009306|GO:0016020 AM378_02810 6487645b4794cad44adb82c93c8968ae 443 SUPERFAMILY SSF111369 235 346 7.06E-6 T 15-10-2018 AM378_02810 6487645b4794cad44adb82c93c8968ae 443 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 364 387 1.4E-63 T 15-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AM378_02810 6487645b4794cad44adb82c93c8968ae 443 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 422 442 1.4E-63 T 15-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AM378_02810 6487645b4794cad44adb82c93c8968ae 443 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 74 94 1.4E-63 T 15-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AM378_02810 6487645b4794cad44adb82c93c8968ae 443 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 307 328 1.4E-63 T 15-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AM378_02810 6487645b4794cad44adb82c93c8968ae 443 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 32 55 1.4E-63 T 15-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AM378_02810 6487645b4794cad44adb82c93c8968ae 443 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 340 364 1.4E-63 T 15-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AM378_02810 6487645b4794cad44adb82c93c8968ae 443 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 407 422 1.4E-63 T 15-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AM378_02810 6487645b4794cad44adb82c93c8968ae 443 Pfam PF00529 HlyD membrane-fusion protein of T1SS 35 399 2.8E-19 T 15-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AM378_02810 6487645b4794cad44adb82c93c8968ae 443 TIGRFAM TIGR01843 type_I_hlyD: type I secretion membrane fusion protein, HlyD family 21 443 3.4E-117 T 15-10-2018 IPR010129 Type I secretion membrane fusion protein, HlyD family GO:0015031|GO:0016021 AM378_10610 8262a0001318be29aa309a0181442cf5 458 SUPERFAMILY SSF103473 12 438 9.29E-76 T 15-10-2018 IPR036259 MFS transporter superfamily AM378_10610 8262a0001318be29aa309a0181442cf5 458 Pfam PF07690 Major Facilitator Superfamily 30 398 1.3E-48 T 15-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM378_10610 8262a0001318be29aa309a0181442cf5 458 ProSitePatterns PS00216 Sugar transport proteins signature 1. 79 95 - T 15-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AM378_10610 8262a0001318be29aa309a0181442cf5 458 ProSitePatterns PS00217 Sugar transport proteins signature 2. 121 146 - T 15-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AM378_10610 8262a0001318be29aa309a0181442cf5 458 Gene3D G3DSA:1.20.1250.20 20 226 1.9E-40 T 15-10-2018 AM378_10610 8262a0001318be29aa309a0181442cf5 458 Gene3D G3DSA:1.20.1250.20 258 440 4.9E-26 T 15-10-2018 AM378_20445 00c2ec608bcbbc42c54fda75b66cf358 202 Pfam PF02036 SCP-2 sterol transfer family 15 113 2.0E-19 T 15-10-2018 IPR003033 SCP2 sterol-binding domain AM378_20445 00c2ec608bcbbc42c54fda75b66cf358 202 SUPERFAMILY SSF55718 11 117 1.29E-7 T 15-10-2018 IPR036527 SCP2 sterol-binding domain superfamily AM378_02905 cacec2b96b044863351851acf8d4c85d 355 TIGRFAM TIGR01656 Histidinol-ppas: histidinol-phosphate phosphatase domain 4 144 3.4E-44 T 15-10-2018 IPR006543 Histidinol-phosphate phosphatase GO:0016791 AM378_02905 cacec2b96b044863351851acf8d4c85d 355 Gene3D G3DSA:3.40.50.1000 1 163 1.4E-42 T 15-10-2018 IPR023214 HAD superfamily AM378_02905 cacec2b96b044863351851acf8d4c85d 355 Gene3D G3DSA:3.30.230.40 255 355 4.0E-36 T 15-10-2018 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily KEGG: 00340+4.2.1.19 AM378_02905 cacec2b96b044863351851acf8d4c85d 355 Hamap MF_00076 Imidazoleglycerol-phosphate dehydratase [hisB]. 167 355 37.298 T 15-10-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 AM378_02905 cacec2b96b044863351851acf8d4c85d 355 SUPERFAMILY SSF54211 252 342 6.45E-32 T 15-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AM378_02905 cacec2b96b044863351851acf8d4c85d 355 Gene3D G3DSA:3.30.230.40 164 254 7.3E-36 T 15-10-2018 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily KEGG: 00340+4.2.1.19 AM378_02905 cacec2b96b044863351851acf8d4c85d 355 ProSitePatterns PS00955 Imidazoleglycerol-phosphate dehydratase signature 2. 319 331 - T 15-10-2018 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 AM378_02905 cacec2b96b044863351851acf8d4c85d 355 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 4 149 5.2E-23 T 15-10-2018 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 AM378_02905 cacec2b96b044863351851acf8d4c85d 355 Hamap MF_01022 Histidine biosynthesis bifunctional protein HisB [hisB]. 2 355 50.692 T 15-10-2018 IPR020566 Histidine biosynthesis bifunctional protein HisB GO:0000105|GO:0004401|GO:0004424 KEGG: 00340+4.2.1.19+3.1.3.15 AM378_02905 cacec2b96b044863351851acf8d4c85d 355 Pfam PF13242 HAD-hyrolase-like 103 152 7.5E-5 T 15-10-2018 AM378_02905 cacec2b96b044863351851acf8d4c85d 355 SUPERFAMILY SSF54211 167 251 1.19E-31 T 15-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AM378_02905 cacec2b96b044863351851acf8d4c85d 355 Pfam PF00475 Imidazoleglycerol-phosphate dehydratase 196 337 4.0E-65 T 15-10-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 AM378_02905 cacec2b96b044863351851acf8d4c85d 355 TIGRFAM TIGR01261 hisB_Nterm: histidinol-phosphatase 3 162 3.6E-75 T 15-10-2018 IPR005954 Histidinol-phosphatase GO:0000105|GO:0004401|GO:0004424|GO:0005737 KEGG: 00340+4.2.1.19+3.1.3.15 AM378_02905 cacec2b96b044863351851acf8d4c85d 355 SUPERFAMILY SSF56784 3 157 1.65E-38 T 15-10-2018 IPR036412 HAD-like superfamily AM378_02905 cacec2b96b044863351851acf8d4c85d 355 ProSitePatterns PS00954 Imidazoleglycerol-phosphate dehydratase signature 1. 226 239 - T 15-10-2018 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 AM378_02340 0fafa1dee3ec43d86f253cee38d4da77 279 Gene3D G3DSA:1.10.10.10 2 121 4.9E-17 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_02340 0fafa1dee3ec43d86f253cee38d4da77 279 SMART SM00862 25 102 7.5E-14 T 15-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AM378_02340 0fafa1dee3ec43d86f253cee38d4da77 279 Pfam PF00486 Transcriptional regulatory protein, C terminal 26 102 4.9E-13 T 15-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AM378_02340 0fafa1dee3ec43d86f253cee38d4da77 279 SUPERFAMILY SSF46894 24 102 4.54E-16 T 15-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AM378_24130 ee2a32fc5853e45b2da30f675b1c22ee 282 SUPERFAMILY SSF63520 58 167 3.53E-27 T 15-10-2018 IPR036634 PRD domain superfamily GO:0006355 AM378_24130 ee2a32fc5853e45b2da30f675b1c22ee 282 Gene3D G3DSA:1.10.1790.10 168 276 5.4E-39 T 15-10-2018 AM378_24130 ee2a32fc5853e45b2da30f675b1c22ee 282 SUPERFAMILY SSF50151 1 52 7.06E-18 T 15-10-2018 IPR036650 CAT RNA-binding domain superfamily GO:0003723 AM378_24130 ee2a32fc5853e45b2da30f675b1c22ee 282 Gene3D G3DSA:1.10.1790.10 64 167 1.5E-34 T 15-10-2018 AM378_24130 ee2a32fc5853e45b2da30f675b1c22ee 282 SUPERFAMILY SSF63520 170 273 3.53E-27 T 15-10-2018 IPR036634 PRD domain superfamily GO:0006355 AM378_24130 ee2a32fc5853e45b2da30f675b1c22ee 282 Gene3D G3DSA:2.30.24.10 1 53 3.2E-24 T 15-10-2018 IPR036650 CAT RNA-binding domain superfamily GO:0003723 AM378_24130 ee2a32fc5853e45b2da30f675b1c22ee 282 SMART SM01061 1 59 6.1E-28 T 15-10-2018 IPR004341 CAT RNA-binding domain GO:0003723 AM378_24130 ee2a32fc5853e45b2da30f675b1c22ee 282 Pfam PF03123 CAT RNA binding domain 1 50 2.7E-23 T 15-10-2018 IPR004341 CAT RNA-binding domain GO:0003723 AM378_24130 ee2a32fc5853e45b2da30f675b1c22ee 282 Pfam PF00874 PRD domain 77 163 1.1E-20 T 15-10-2018 IPR011608 PRD domain GO:0006355 AM378_24130 ee2a32fc5853e45b2da30f675b1c22ee 282 Pfam PF00874 PRD domain 180 272 2.5E-19 T 15-10-2018 IPR011608 PRD domain GO:0006355 AM378_14035 1153ea976040efb835b8396622eed194 292 Gene3D G3DSA:3.40.190.290 91 289 3.3E-45 T 15-10-2018 AM378_14035 1153ea976040efb835b8396622eed194 292 Gene3D G3DSA:1.10.10.10 1 85 5.1E-31 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_14035 1153ea976040efb835b8396622eed194 292 Pfam PF03466 LysR substrate binding domain 88 286 1.3E-41 T 15-10-2018 IPR005119 LysR, substrate-binding AM378_14035 1153ea976040efb835b8396622eed194 292 SUPERFAMILY SSF53850 89 284 3.57E-39 T 15-10-2018 AM378_14035 1153ea976040efb835b8396622eed194 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.0E-8 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_14035 1153ea976040efb835b8396622eed194 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.0E-8 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_14035 1153ea976040efb835b8396622eed194 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.0E-8 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_14035 1153ea976040efb835b8396622eed194 292 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 6.0E-24 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_14035 1153ea976040efb835b8396622eed194 292 SUPERFAMILY SSF46785 1 85 8.27E-25 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM378_23370 f981ebe9af630ce2c50fd71fee3cddc4 113 Gene3D G3DSA:3.30.160.100 1 106 3.7E-36 T 15-10-2018 IPR036567 Ribosome hibernation promotion factor-like AM378_23370 f981ebe9af630ce2c50fd71fee3cddc4 113 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 3 91 8.2E-22 T 15-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 AM378_23370 f981ebe9af630ce2c50fd71fee3cddc4 113 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 96 9.1E-34 T 15-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 AM378_23370 f981ebe9af630ce2c50fd71fee3cddc4 113 SUPERFAMILY SSF69754 3 102 3.4E-32 T 15-10-2018 IPR036567 Ribosome hibernation promotion factor-like AM378_17480 6747b3f7225f19e4302af2034358a2c9 104 Pfam PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 39 103 1.1E-22 T 15-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM378_17480 6747b3f7225f19e4302af2034358a2c9 104 TIGRFAM TIGR01079 rplX_bact: ribosomal protein uL24 3 103 1.5E-39 T 15-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM378_17480 6747b3f7225f19e4302af2034358a2c9 104 SUPERFAMILY SSF50104 4 100 6.02E-33 T 15-10-2018 IPR008991 Translation protein SH3-like domain superfamily AM378_17480 6747b3f7225f19e4302af2034358a2c9 104 SMART SM00739 4 31 0.0011 T 15-10-2018 IPR005824 KOW AM378_17480 6747b3f7225f19e4302af2034358a2c9 104 ProSitePatterns PS01108 Ribosomal protein L24 signature. 8 25 - T 15-10-2018 IPR005825 Ribosomal protein L24/L26, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM378_17480 6747b3f7225f19e4302af2034358a2c9 104 Gene3D G3DSA:2.30.30.30 2 104 3.9E-40 T 15-10-2018 IPR014722 Ribosomal protein L2, domain 2 AM378_17480 6747b3f7225f19e4302af2034358a2c9 104 Hamap MF_01326_B 50S ribosomal protein L24 [rplX]. 3 97 20.029 T 15-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM378_22970 85f561cc6e46c110ad718a921cf29960 261 Hamap MF_01000 Vitamin B12-binding protein [btuF]. 2 261 48.838 T 15-10-2018 IPR023544 ABC transporter, vitamin B12-binding protein GO:0015889|GO:0031419|GO:0042597 AM378_22970 85f561cc6e46c110ad718a921cf29960 261 Gene3D G3DSA:3.40.50.1980 15 133 2.1E-34 T 15-10-2018 AM378_22970 85f561cc6e46c110ad718a921cf29960 261 Pfam PF01497 Periplasmic binding protein 19 215 1.9E-20 T 15-10-2018 IPR002491 ABC transporter periplasmic binding domain AM378_22970 85f561cc6e46c110ad718a921cf29960 261 Gene3D G3DSA:3.40.50.1980 136 260 8.3E-34 T 15-10-2018 AM378_22970 85f561cc6e46c110ad718a921cf29960 261 SUPERFAMILY SSF53807 16 257 2.63E-55 T 15-10-2018 AM378_04825 896aa8c8f8b8d26cfb77a3c3a4630e3f 420 SUPERFAMILY SSF51735 162 315 1.17E-34 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily AM378_04825 896aa8c8f8b8d26cfb77a3c3a4630e3f 420 ProSitePatterns PS00747 Glutamyl-tRNA reductase signature. 99 122 - T 15-10-2018 IPR018214 Glutamyl-tRNA reductase, conserved site GO:0008883|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 AM378_04825 896aa8c8f8b8d26cfb77a3c3a4630e3f 420 SUPERFAMILY SSF69075 317 418 6.41E-28 T 15-10-2018 IPR036453 Glutamyl tRNA-reductase dimerization domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 AM378_04825 896aa8c8f8b8d26cfb77a3c3a4630e3f 420 Pfam PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain 6 156 1.9E-49 T 15-10-2018 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 AM378_04825 896aa8c8f8b8d26cfb77a3c3a4630e3f 420 SUPERFAMILY SSF69742 1 158 3.01E-47 T 15-10-2018 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 AM378_04825 896aa8c8f8b8d26cfb77a3c3a4630e3f 420 Gene3D G3DSA:3.30.460.30 1 158 7.1E-58 T 15-10-2018 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 AM378_04825 896aa8c8f8b8d26cfb77a3c3a4630e3f 420 Hamap MF_00087 Glutamyl-tRNA reductase [hemA]. 2 418 30.855 T 15-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 AM378_04825 896aa8c8f8b8d26cfb77a3c3a4630e3f 420 Pfam PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain 320 416 7.0E-25 T 15-10-2018 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 AM378_04825 896aa8c8f8b8d26cfb77a3c3a4630e3f 420 Gene3D G3DSA:3.40.50.720 161 313 1.6E-43 T 15-10-2018 AM378_04825 896aa8c8f8b8d26cfb77a3c3a4630e3f 420 TIGRFAM TIGR01035 hemA: glutamyl-tRNA reductase 4 417 2.0E-156 T 15-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 AM378_04825 896aa8c8f8b8d26cfb77a3c3a4630e3f 420 PIRSF PIRSF000445 1 420 3.0E-154 T 15-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 AM378_04825 896aa8c8f8b8d26cfb77a3c3a4630e3f 420 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 172 306 3.0E-48 T 15-10-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase AM378_21585 bfa0c1a506db28b9b96d0ec6c8d1921e 471 Pfam PF02378 Phosphotransferase system, EIIC 112 404 6.5E-33 T 15-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 AM378_21585 bfa0c1a506db28b9b96d0ec6c8d1921e 471 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 21 38 - T 15-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 AM378_21585 bfa0c1a506db28b9b96d0ec6c8d1921e 471 SUPERFAMILY SSF55604 10 81 8.11E-20 T 15-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 AM378_21585 bfa0c1a506db28b9b96d0ec6c8d1921e 471 Pfam PF00367 phosphotransferase system, EIIB 12 42 5.1E-13 T 15-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 AM378_21585 bfa0c1a506db28b9b96d0ec6c8d1921e 471 TIGRFAM TIGR01992 PTS-IIBC-Tre: PTS system, trehalose-specific IIBC component 6 460 8.6E-213 T 15-10-2018 IPR011296 Phosphotransferase system, trehalose-specific IIBC component GO:0015574|GO:0015771|GO:0016021 KEGG: 00500+2.7.1.201 AM378_21585 bfa0c1a506db28b9b96d0ec6c8d1921e 471 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 30 111 8.8E-19 T 15-10-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 AM378_21585 bfa0c1a506db28b9b96d0ec6c8d1921e 471 Gene3D G3DSA:3.30.1360.60 2 78 1.1E-22 T 15-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 AM378_18490 c48eba97f172928db5dcc0f78f7e0406 231 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 168 182 2.7E-10 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM378_18490 c48eba97f172928db5dcc0f78f7e0406 231 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 198 210 2.7E-10 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM378_18490 c48eba97f172928db5dcc0f78f7e0406 231 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 182 198 2.7E-10 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM378_18490 c48eba97f172928db5dcc0f78f7e0406 231 SMART SM00421 165 222 3.5E-18 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM378_18490 c48eba97f172928db5dcc0f78f7e0406 231 Pfam PF00196 Bacterial regulatory proteins, luxR family 167 220 1.6E-16 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM378_18490 c48eba97f172928db5dcc0f78f7e0406 231 SUPERFAMILY SSF46894 150 228 4.08E-19 T 15-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AM378_18490 c48eba97f172928db5dcc0f78f7e0406 231 Pfam PF03472 Autoinducer binding domain 18 153 1.5E-27 T 15-10-2018 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain AM378_18490 c48eba97f172928db5dcc0f78f7e0406 231 Gene3D G3DSA:1.10.10.10 170 230 1.2E-21 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_18490 c48eba97f172928db5dcc0f78f7e0406 231 Gene3D G3DSA:3.30.450.80 5 169 9.0E-50 T 15-10-2018 IPR036693 Transcription factor LuxR-like, autoinducer-binding domain superfamily AM378_18490 c48eba97f172928db5dcc0f78f7e0406 231 SUPERFAMILY SSF75516 15 158 1.44E-34 T 15-10-2018 IPR036693 Transcription factor LuxR-like, autoinducer-binding domain superfamily AM378_18490 c48eba97f172928db5dcc0f78f7e0406 231 ProSitePatterns PS00622 LuxR-type HTH domain signature. 182 209 - T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM378_18465 4efa233cca4e912970b3549e6326aafb 440 Gene3D G3DSA:1.20.1250.20 21 440 1.7E-68 T 15-10-2018 AM378_18465 4efa233cca4e912970b3549e6326aafb 440 ProSitePatterns PS00216 Sugar transport proteins signature 1. 309 326 - T 15-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AM378_18465 4efa233cca4e912970b3549e6326aafb 440 TIGRFAM TIGR00883 2A0106: MFS transporter, metabolite:H+ symporter (MHS) family protein 31 425 2.2E-149 T 15-10-2018 IPR004736 MFS transporter, metabolite:H symporter GO:0016021|GO:0022857|GO:0055085 AM378_18465 4efa233cca4e912970b3549e6326aafb 440 Pfam PF00083 Sugar (and other) transporter 24 230 4.7E-24 T 15-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 AM378_18465 4efa233cca4e912970b3549e6326aafb 440 Pfam PF07690 Major Facilitator Superfamily 284 438 9.1E-13 T 15-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM378_18465 4efa233cca4e912970b3549e6326aafb 440 SUPERFAMILY SSF103473 19 440 7.46E-65 T 15-10-2018 IPR036259 MFS transporter superfamily AM378_12540 a69e14132ae19569c9401ef25cba52f6 461 Gene3D G3DSA:3.20.20.70 141 454 1.9E-146 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM378_12540 a69e14132ae19569c9401ef25cba52f6 461 Gene3D G3DSA:2.30.170.30 1 53 8.4E-21 T 15-10-2018 AM378_12540 a69e14132ae19569c9401ef25cba52f6 461 Gene3D G3DSA:1.10.220.70 54 140 2.8E-34 T 15-10-2018 AM378_12540 a69e14132ae19569c9401ef25cba52f6 461 PIRSF PIRSF018788 1 458 8.7E-234 T 15-10-2018 IPR010628 Ethanolamine ammonia lyase large subunit GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7 AM378_12540 a69e14132ae19569c9401ef25cba52f6 461 Pfam PF06751 Ethanolamine ammonia lyase large subunit (EutB) 11 445 3.2E-223 T 15-10-2018 IPR010628 Ethanolamine ammonia lyase large subunit GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7 AM378_18150 fc567884bb532ff94e4dec01d7b95051 501 SUPERFAMILY SSF53720 2 485 3.67E-143 T 15-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 AM378_18150 fc567884bb532ff94e4dec01d7b95051 501 Pfam PF00171 Aldehyde dehydrogenase family 16 480 2.9E-135 T 15-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 AM378_18150 fc567884bb532ff94e4dec01d7b95051 501 Gene3D G3DSA:3.40.605.10 23 462 3.7E-147 T 15-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 AM378_18150 fc567884bb532ff94e4dec01d7b95051 501 Gene3D G3DSA:3.40.309.10 249 454 3.7E-147 T 15-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 AM378_18150 fc567884bb532ff94e4dec01d7b95051 501 TIGRFAM TIGR01722 MMSDH: methylmalonate-semialdehyde dehydrogenase (acylating) 5 485 1.4E-196 T 15-10-2018 IPR010061 Methylmalonate-semialdehyde dehydrogenase GO:0004491|GO:0055114 KEGG: 00280+1.2.1.27|KEGG: 00640+1.2.1.27|MetaCyc: PWY-5642|Reactome: R-HSA-70895 AM378_21635 4370534c6613fa1e169ea867594f4aa9 141 Hamap MF_01888 Regulator of ribonuclease activity B [rraB]. 4 117 31.256 T 15-10-2018 IPR016716 Regulator of ribonuclease activity B AM378_21635 4370534c6613fa1e169ea867594f4aa9 141 Gene3D G3DSA:3.30.70.970 1 125 8.6E-50 T 15-10-2018 IPR036701 RraB-like superfamily AM378_21635 4370534c6613fa1e169ea867594f4aa9 141 SUPERFAMILY SSF89946 3 122 2.88E-41 T 15-10-2018 IPR036701 RraB-like superfamily AM378_21635 4370534c6613fa1e169ea867594f4aa9 141 PIRSF PIRSF018193 1 141 6.2E-67 T 15-10-2018 IPR016716 Regulator of ribonuclease activity B AM378_21635 4370534c6613fa1e169ea867594f4aa9 141 Pfam PF06877 Regulator of ribonuclease activity B 12 113 3.6E-34 T 15-10-2018 IPR009671 Regulator of ribonuclease activity B domain AM378_00030 166b08f5ad76329ea98ce8c9590184d0 274 Gene3D G3DSA:3.30.1240.10 82 185 2.7E-57 T 15-10-2018 AM378_00030 166b08f5ad76329ea98ce8c9590184d0 274 Hamap MF_01847 HMP-PP phosphatase [cof]. 1 274 65.423 T 15-10-2018 IPR023938 HMP-PP phosphatase GO:0016818 AM378_00030 166b08f5ad76329ea98ce8c9590184d0 274 ProSitePatterns PS01228 Hypothetical cof family signature 1. 4 15 - T 15-10-2018 AM378_00030 166b08f5ad76329ea98ce8c9590184d0 274 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 5 230 2.2E-41 T 15-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 AM378_00030 166b08f5ad76329ea98ce8c9590184d0 274 Pfam PF08282 haloacid dehalogenase-like hydrolase 6 259 7.0E-52 T 15-10-2018 AM378_00030 166b08f5ad76329ea98ce8c9590184d0 274 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 5 259 9.2E-56 T 15-10-2018 IPR000150 Cof family GO:0016787 AM378_00030 166b08f5ad76329ea98ce8c9590184d0 274 Gene3D G3DSA:3.40.50.1000 6 255 2.7E-57 T 15-10-2018 IPR023214 HAD superfamily AM378_00030 166b08f5ad76329ea98ce8c9590184d0 274 SUPERFAMILY SSF56784 1 263 9.26E-64 T 15-10-2018 IPR036412 HAD-like superfamily AM378_00030 166b08f5ad76329ea98ce8c9590184d0 274 ProSitePatterns PS01229 Hypothetical cof family signature 2. 211 233 - T 15-10-2018 AM378_23195 d8680dc8cdf00814993b54eccf11ee04 297 Gene3D G3DSA:3.40.190.10 166 269 7.6E-54 T 15-10-2018 AM378_23195 d8680dc8cdf00814993b54eccf11ee04 297 Gene3D G3DSA:3.40.190.10 93 293 7.6E-54 T 15-10-2018 AM378_23195 d8680dc8cdf00814993b54eccf11ee04 297 Pfam PF03466 LysR substrate binding domain 90 294 3.1E-36 T 15-10-2018 IPR005119 LysR, substrate-binding AM378_23195 d8680dc8cdf00814993b54eccf11ee04 297 SUPERFAMILY SSF46785 5 90 4.0E-21 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM378_23195 d8680dc8cdf00814993b54eccf11ee04 297 Gene3D G3DSA:1.10.10.10 5 91 2.4E-22 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_23195 d8680dc8cdf00814993b54eccf11ee04 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 65 1.5E-19 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_23195 d8680dc8cdf00814993b54eccf11ee04 297 SUPERFAMILY SSF53850 91 294 1.27E-39 T 15-10-2018 AM378_03265 51e0707fa0a6b2545254ff9c23ee6bfa 238 Gene3D G3DSA:1.10.3720.10 2 232 9.9E-48 T 15-10-2018 IPR035906 MetI-like superfamily AM378_03265 51e0707fa0a6b2545254ff9c23ee6bfa 238 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 4 86 2.8E-13 T 15-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 AM378_03265 51e0707fa0a6b2545254ff9c23ee6bfa 238 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 25 226 2.9E-15 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AM378_03265 51e0707fa0a6b2545254ff9c23ee6bfa 238 SUPERFAMILY SSF161098 7 217 1.44E-36 T 15-10-2018 IPR035906 MetI-like superfamily AM378_19420 416a808f4fc13ba68768cf7d39153fcd 46 Hamap MF_00391 50S ribosomal protein L34 [rpmH]. 1 44 16.163 T 15-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM378_19420 416a808f4fc13ba68768cf7d39153fcd 46 ProDom PD003101 RIBOSOMAL L34 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID L34 MITOCHONDRIAL PEPTIDE SEQUENCING 1 31 4.0E-11 T 15-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM378_19420 416a808f4fc13ba68768cf7d39153fcd 46 Pfam PF00468 Ribosomal protein L34 1 44 1.7E-24 T 15-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM378_19420 416a808f4fc13ba68768cf7d39153fcd 46 ProSitePatterns PS00784 Ribosomal protein L34 signature. 2 21 - T 15-10-2018 IPR020939 Ribosomal protein L34, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM378_19420 416a808f4fc13ba68768cf7d39153fcd 46 TIGRFAM TIGR01030 rpmH_bact: ribosomal protein bL34 1 44 3.6E-27 T 15-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM378_24165 40185d05c3765a228467d0104e8131ff 468 Pfam PF00324 Amino acid permease 22 458 3.7E-110 T 15-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 AM378_24165 40185d05c3765a228467d0104e8131ff 468 PIRSF PIRSF006060 1 466 3.1E-79 T 15-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 AM378_24165 40185d05c3765a228467d0104e8131ff 468 Gene3D G3DSA:1.20.1740.10 12 466 4.3E-65 T 15-10-2018 AM378_24165 40185d05c3765a228467d0104e8131ff 468 ProSitePatterns PS00218 Amino acid permeases signature. 47 77 - T 15-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 AM378_07930 1569ecd992735724e68d928fc1df4788 248 Gene3D G3DSA:1.10.10.10 1 53 1.3E-6 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_07930 1569ecd992735724e68d928fc1df4788 248 SMART SM00420 4 56 2.9E-18 T 15-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AM378_07930 1569ecd992735724e68d928fc1df4788 248 SUPERFAMILY SSF100950 68 227 1.81E-27 T 15-10-2018 IPR037171 NagB/RpiA transferase-like AM378_07930 1569ecd992735724e68d928fc1df4788 248 SUPERFAMILY SSF46785 2 59 4.58E-14 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM378_07930 1569ecd992735724e68d928fc1df4788 248 Pfam PF08220 DeoR-like helix-turn-helix domain 4 59 2.2E-15 T 15-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AM378_07930 1569ecd992735724e68d928fc1df4788 248 SMART SM01134 67 227 3.6E-55 T 15-10-2018 AM378_07930 1569ecd992735724e68d928fc1df4788 248 Pfam PF00455 DeoR C terminal sensor domain 70 226 6.8E-43 T 15-10-2018 IPR014036 DeoR C-terminal sensor domain AM378_07930 1569ecd992735724e68d928fc1df4788 248 ProSitePatterns PS00894 DeoR-type HTH domain signature. 4 38 - T 15-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 AM378_07930 1569ecd992735724e68d928fc1df4788 248 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 36 54 1.9E-5 T 15-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AM378_07930 1569ecd992735724e68d928fc1df4788 248 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 22 36 1.9E-5 T 15-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AM378_05375 5dc4d40c66e0b59b47dbb31ac80c9150 287 SUPERFAMILY SSF161098 13 280 2.06E-52 T 15-10-2018 IPR035906 MetI-like superfamily AM378_05375 5dc4d40c66e0b59b47dbb31ac80c9150 287 TIGRFAM TIGR03226 PhnU: 2-aminoethylphosphonate ABC transporter, permease protein 12 286 6.0E-126 T 15-10-2018 IPR017636 2-aminoethylphosphonate ABC transporter system, permease protein phnU GO:0016020|GO:0033223 AM378_05375 5dc4d40c66e0b59b47dbb31ac80c9150 287 Gene3D G3DSA:1.10.3720.10 17 285 1.9E-54 T 15-10-2018 IPR035906 MetI-like superfamily AM378_05375 5dc4d40c66e0b59b47dbb31ac80c9150 287 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 87 282 4.7E-16 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AM378_06975 8c13c975e89ae497bef97bf6539f5e7f 288 SUPERFAMILY SSF51735 1 240 7.26E-64 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily AM378_06975 8c13c975e89ae497bef97bf6539f5e7f 288 Gene3D G3DSA:3.40.50.720 3 281 1.5E-78 T 15-10-2018 AM378_06975 8c13c975e89ae497bef97bf6539f5e7f 288 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 78 89 3.3E-8 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_06975 8c13c975e89ae497bef97bf6539f5e7f 288 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 151 170 3.3E-8 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_06975 8c13c975e89ae497bef97bf6539f5e7f 288 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 131 139 3.3E-8 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_06975 8c13c975e89ae497bef97bf6539f5e7f 288 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 187 0.0028 T 15-10-2018 AM378_06975 8c13c975e89ae497bef97bf6539f5e7f 288 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 172 189 5.4E-25 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_06975 8c13c975e89ae497bef97bf6539f5e7f 288 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 5.4E-25 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_06975 8c13c975e89ae497bef97bf6539f5e7f 288 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 151 170 5.4E-25 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_06975 8c13c975e89ae497bef97bf6539f5e7f 288 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 78 89 5.4E-25 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_06975 8c13c975e89ae497bef97bf6539f5e7f 288 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 125 141 5.4E-25 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_06975 8c13c975e89ae497bef97bf6539f5e7f 288 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 138 166 - T 15-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AM378_06975 8c13c975e89ae497bef97bf6539f5e7f 288 Pfam PF00106 short chain dehydrogenase 6 193 1.5E-50 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_22690 8966b8d2701467a63e4ca023e87e06f4 97 Pfam PF13710 ACT domain 19 79 1.1E-9 T 15-10-2018 AM378_22690 8966b8d2701467a63e4ca023e87e06f4 97 SUPERFAMILY SSF55021 10 82 1.04E-16 T 15-10-2018 AM378_22690 8966b8d2701467a63e4ca023e87e06f4 97 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 16 79 2.0E-16 T 15-10-2018 AM378_22690 8966b8d2701467a63e4ca023e87e06f4 97 Gene3D G3DSA:3.30.70.260 1 97 4.9E-35 T 15-10-2018 AM378_01550 225c58b86751914ba3b11b738fc7a181 180 Pfam PF00583 Acetyltransferase (GNAT) family 40 145 9.0E-18 T 15-10-2018 IPR000182 GNAT domain AM378_01550 225c58b86751914ba3b11b738fc7a181 180 SUPERFAMILY SSF55729 19 160 3.14E-22 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase AM378_01550 225c58b86751914ba3b11b738fc7a181 180 Gene3D G3DSA:3.40.630.30 44 176 8.4E-29 T 15-10-2018 AM378_01550 225c58b86751914ba3b11b738fc7a181 180 PRINTS PR01754 Streptothricin acetyltransferase signature 137 153 1.4E-10 T 15-10-2018 IPR008125 Streptothricin acetyltransferase AM378_01550 225c58b86751914ba3b11b738fc7a181 180 PRINTS PR01754 Streptothricin acetyltransferase signature 92 107 1.4E-10 T 15-10-2018 IPR008125 Streptothricin acetyltransferase AM378_01550 225c58b86751914ba3b11b738fc7a181 180 PRINTS PR01754 Streptothricin acetyltransferase signature 116 131 1.4E-10 T 15-10-2018 IPR008125 Streptothricin acetyltransferase AM378_14160 5619200b5b5b1b1f7ab7e151b786e73e 235 Gene3D G3DSA:3.30.2310.10 148 231 1.1E-22 T 15-10-2018 AM378_14160 5619200b5b5b1b1f7ab7e151b786e73e 235 SUPERFAMILY SSF118196 1 230 4.97E-84 T 15-10-2018 IPR036413 YaeB-like superfamily AM378_14160 5619200b5b5b1b1f7ab7e151b786e73e 235 ProSitePatterns PS01318 TsaA-like domain signature. 87 98 - T 15-10-2018 IPR023368 Uncharacterised protein family UPF0066, conserved site AM378_14160 5619200b5b5b1b1f7ab7e151b786e73e 235 Gene3D G3DSA:2.40.30.70 25 147 1.5E-46 T 15-10-2018 IPR036414 YaeB, N-terminal domain superfamily AM378_14160 5619200b5b5b1b1f7ab7e151b786e73e 235 Pfam PF01980 Uncharacterised protein family UPF0066 21 142 4.7E-38 T 15-10-2018 IPR023370 YaeB-like, N-terminal domain AM378_14160 5619200b5b5b1b1f7ab7e151b786e73e 235 TIGRFAM TIGR00104 tRNA_TsaA: tRNA-Thr(GGU) m(6)t(6)A37 methyltransferase TsaA 2 149 2.5E-55 T 15-10-2018 IPR023370 YaeB-like, N-terminal domain AM378_23520 57d65498e8841d34dbd2ef41d4c5457c 342 SUPERFAMILY SSF100950 9 333 1.67E-111 T 15-10-2018 IPR037171 NagB/RpiA transferase-like AM378_23520 57d65498e8841d34dbd2ef41d4c5457c 342 TIGRFAM TIGR00512 salvage_mtnA: S-methyl-5-thioribose-1-phosphate isomerase 8 328 3.4E-124 T 15-10-2018 IPR005251 Methylthioribose-1-phosphate isomerase GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 AM378_23520 57d65498e8841d34dbd2ef41d4c5457c 342 Hamap MF_01678 Putative methylthioribose-1-phosphate isomerase [mtnA]. 5 340 36.432 T 15-10-2018 IPR005251 Methylthioribose-1-phosphate isomerase GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 AM378_23520 57d65498e8841d34dbd2ef41d4c5457c 342 Gene3D G3DSA:3.40.50.10470 131 337 2.1E-68 T 15-10-2018 AM378_23520 57d65498e8841d34dbd2ef41d4c5457c 342 TIGRFAM TIGR00524 eIF-2B_rel: eIF-2B alpha/beta/delta-related uncharacterized proteins 33 329 2.7E-93 T 15-10-2018 IPR011559 Initiation factor 2B alpha/beta/delta GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 AM378_23520 57d65498e8841d34dbd2ef41d4c5457c 342 Gene3D G3DSA:1.20.120.420 2 130 9.0E-30 T 15-10-2018 IPR027363 Methylthioribose-1-phosphate isomerase, N-terminal KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 AM378_23520 57d65498e8841d34dbd2ef41d4c5457c 342 Pfam PF01008 Initiation factor 2 subunit family 48 329 2.9E-67 T 15-10-2018 IPR000649 Initiation factor 2B-related GO:0044237 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174 AM378_12610 223efccbc6848d2d0a248f6b159df208 226 SMART SM00448 1 111 5.7E-37 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM378_12610 223efccbc6848d2d0a248f6b159df208 226 SMART SM00862 149 225 1.4E-21 T 15-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AM378_12610 223efccbc6848d2d0a248f6b159df208 226 Gene3D G3DSA:3.40.50.2300 1 123 6.8E-32 T 15-10-2018 AM378_12610 223efccbc6848d2d0a248f6b159df208 226 SUPERFAMILY SSF52172 1 123 1.57E-35 T 15-10-2018 IPR011006 CheY-like superfamily AM378_12610 223efccbc6848d2d0a248f6b159df208 226 SUPERFAMILY SSF46894 127 225 1.22E-24 T 15-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AM378_12610 223efccbc6848d2d0a248f6b159df208 226 Pfam PF00486 Transcriptional regulatory protein, C terminal 150 225 3.4E-20 T 15-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AM378_12610 223efccbc6848d2d0a248f6b159df208 226 Gene3D G3DSA:1.10.10.10 124 226 6.8E-29 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_12610 223efccbc6848d2d0a248f6b159df208 226 Pfam PF00072 Response regulator receiver domain 3 111 6.5E-21 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM378_00250 49447f8f2fe62a10cf8a6339987c3657 183 Gene3D G3DSA:3.40.50.2020 1 183 1.8E-66 T 15-10-2018 AM378_00250 49447f8f2fe62a10cf8a6339987c3657 183 TIGRFAM TIGR01090 apt: adenine phosphoribosyltransferase 11 179 5.1E-72 T 15-10-2018 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-6798695|Reactome: R-HSA-74217 AM378_00250 49447f8f2fe62a10cf8a6339987c3657 183 SUPERFAMILY SSF53271 14 180 1.48E-52 T 15-10-2018 IPR029057 Phosphoribosyltransferase-like AM378_00250 49447f8f2fe62a10cf8a6339987c3657 183 Hamap MF_00004 Adenine phosphoribosyltransferase [apt]. 11 180 38.415 T 15-10-2018 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-6798695|Reactome: R-HSA-74217 AM378_00250 49447f8f2fe62a10cf8a6339987c3657 183 Pfam PF00156 Phosphoribosyl transferase domain 31 164 5.8E-17 T 15-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 AM378_22565 ecf5149b99e678b2a50ef5ee9d1fd04c 308 SUPERFAMILY SSF53850 90 296 2.17E-42 T 15-10-2018 AM378_22565 ecf5149b99e678b2a50ef5ee9d1fd04c 308 Gene3D G3DSA:1.10.10.10 4 89 7.3E-25 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_22565 ecf5149b99e678b2a50ef5ee9d1fd04c 308 Pfam PF03466 LysR substrate binding domain 89 291 1.2E-40 T 15-10-2018 IPR005119 LysR, substrate-binding AM378_22565 ecf5149b99e678b2a50ef5ee9d1fd04c 308 SUPERFAMILY SSF46785 6 113 4.74E-22 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM378_22565 ecf5149b99e678b2a50ef5ee9d1fd04c 308 Gene3D G3DSA:3.40.190.290 92 293 1.2E-56 T 15-10-2018 AM378_22565 ecf5149b99e678b2a50ef5ee9d1fd04c 308 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 2.9E-20 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_22565 ecf5149b99e678b2a50ef5ee9d1fd04c 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 6.0E-6 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_22565 ecf5149b99e678b2a50ef5ee9d1fd04c 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 6.0E-6 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_22565 ecf5149b99e678b2a50ef5ee9d1fd04c 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 6.0E-6 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_20030 63960cbb6f0596efabe23bdea0bde21b 376 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 13 371 2.0E-85 T 15-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase AM378_20030 63960cbb6f0596efabe23bdea0bde21b 376 Hamap MF_02026 dTDP-4-amino-4,6-dideoxygalactose transaminase [wecE]. 1 376 80.433 T 15-10-2018 IPR032894 dTDP-4-amino-4,6-dideoxygalactose transaminase WecE GO:0009246|GO:0019180 MetaCyc: PWY-7315 AM378_20030 63960cbb6f0596efabe23bdea0bde21b 376 Gene3D G3DSA:3.40.640.10 1 249 1.5E-84 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AM378_20030 63960cbb6f0596efabe23bdea0bde21b 376 SUPERFAMILY SSF53383 2 375 5.78E-102 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM378_20030 63960cbb6f0596efabe23bdea0bde21b 376 TIGRFAM TIGR02379 ECA_wecE: TDP-4-keto-6-deoxy-D-glucose transaminase 1 375 2.9E-216 T 15-10-2018 IPR012749 dTDP-4-amino-4,6-dideoxygalactose transaminase WecE-like MetaCyc: PWY-7315 AM378_20030 63960cbb6f0596efabe23bdea0bde21b 376 Gene3D G3DSA:3.90.1150.10 250 376 1.9E-26 T 15-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AM378_20030 63960cbb6f0596efabe23bdea0bde21b 376 PIRSF PIRSF000390 1 376 3.7E-118 T 15-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase AM378_17590 638b6456170dd78ec7983e547ee553bd 244 Pfam PF13309 HTH domain 175 232 1.9E-18 T 15-10-2018 IPR039445 Transcriptional regulator DauR-like, HTH domain AM378_17590 638b6456170dd78ec7983e547ee553bd 244 ProDom PD037769 DNA-BINDING YHEO UNCHARACTERIZED BACTERIA SIMILAR HI0575 CONTAINING TRANSCRIPTION REGULATOR HELIX-TURN-HELIX 31 157 4.0E-62 T 15-10-2018 IPR013559 YheO-like AM378_17590 638b6456170dd78ec7983e547ee553bd 244 Pfam PF08348 YheO-like PAS domain 33 141 2.3E-36 T 15-10-2018 IPR013559 YheO-like AM378_22130 2504c465c101e6a32fcd1f89d3ae4b90 484 Pfam PF00171 Aldehyde dehydrogenase family 16 470 6.2E-172 T 15-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 AM378_22130 2504c465c101e6a32fcd1f89d3ae4b90 484 Gene3D G3DSA:3.40.309.10 248 440 7.1E-176 T 15-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 AM378_22130 2504c465c101e6a32fcd1f89d3ae4b90 484 TIGRFAM TIGR02299 HpaE: 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase 4 483 7.9E-218 T 15-10-2018 IPR011985 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase GO:0018480|GO:1901023 AM378_22130 2504c465c101e6a32fcd1f89d3ae4b90 484 Gene3D G3DSA:3.40.605.10 8 468 7.1E-176 T 15-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 AM378_22130 2504c465c101e6a32fcd1f89d3ae4b90 484 SUPERFAMILY SSF53720 2 476 6.68E-166 T 15-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 AM378_22130 2504c465c101e6a32fcd1f89d3ae4b90 484 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 271 282 - T 15-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 AM378_22130 2504c465c101e6a32fcd1f89d3ae4b90 484 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 243 250 - T 15-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 AM378_15420 32d84435f954e2105c68f5d17da38abb 264 TIGRFAM TIGR00222 panB: 3-methyl-2-oxobutanoate hydroxymethyltransferase 1 263 1.8E-121 T 15-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 AM378_15420 32d84435f954e2105c68f5d17da38abb 264 SUPERFAMILY SSF51621 4 263 2.39E-106 T 15-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 AM378_15420 32d84435f954e2105c68f5d17da38abb 264 Gene3D G3DSA:3.20.20.60 1 264 7.5E-108 T 15-10-2018 AM378_15420 32d84435f954e2105c68f5d17da38abb 264 PIRSF PIRSF000388 1 264 9.4E-102 T 15-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 AM378_15420 32d84435f954e2105c68f5d17da38abb 264 Pfam PF02548 Ketopantoate hydroxymethyltransferase 4 258 5.2E-108 T 15-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 AM378_15420 32d84435f954e2105c68f5d17da38abb 264 Hamap MF_00156 3-methyl-2-oxobutanoate hydroxymethyltransferase [panB]. 4 263 42.215 T 15-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 AM378_00690 23367ae9c96f6006449391e4fe7910ef 105 Pfam PF02410 Ribosomal silencing factor during starvation 10 104 3.2E-27 T 15-10-2018 AM378_00690 23367ae9c96f6006449391e4fe7910ef 105 SUPERFAMILY SSF81301 4 105 1.8E-35 T 15-10-2018 AM378_00690 23367ae9c96f6006449391e4fe7910ef 105 Hamap MF_01477 Ribosomal silencing factor RsfS [rsfS]. 3 105 23.637 T 15-10-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS AM378_00690 23367ae9c96f6006449391e4fe7910ef 105 Gene3D G3DSA:3.30.460.10 2 105 1.8E-34 T 15-10-2018 AM378_00690 23367ae9c96f6006449391e4fe7910ef 105 TIGRFAM TIGR00090 rsfS_iojap_ybeB: ribosome silencing factor 8 104 8.4E-37 T 15-10-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS AM378_08745 2342e502b2743ff1e2d7590f66c7b903 252 Gene3D G3DSA:3.20.20.380 1 249 2.3E-88 T 15-10-2018 IPR036822 Copper homeostasis (CutC) domain superfamily GO:0005507|GO:0055070 Reactome: R-HSA-936837 AM378_08745 2342e502b2743ff1e2d7590f66c7b903 252 Hamap MF_00795 Copper homeostasis protein CutC [cutC]. 2 202 27.63 T 15-10-2018 IPR005627 Copper homeostasis protein CutC GO:0005507|GO:0055070 Reactome: R-HSA-936837 AM378_08745 2342e502b2743ff1e2d7590f66c7b903 252 Pfam PF03932 CutC family 3 199 6.1E-72 T 15-10-2018 IPR023648 Copper homeostasis CutC domain GO:0005507|GO:0055070 Reactome: R-HSA-936837 AM378_08745 2342e502b2743ff1e2d7590f66c7b903 252 SUPERFAMILY SSF110395 2 243 2.09E-77 T 15-10-2018 IPR036822 Copper homeostasis (CutC) domain superfamily GO:0005507|GO:0055070 Reactome: R-HSA-936837 AM378_16390 999d17ff99120e30daaacbe439be8b96 411 PRINTS PR00173 Glutamate-aspartate symporter signature 39 64 1.7E-14 T 15-10-2018 AM378_16390 999d17ff99120e30daaacbe439be8b96 411 PRINTS PR00173 Glutamate-aspartate symporter signature 347 367 1.7E-14 T 15-10-2018 AM378_16390 999d17ff99120e30daaacbe439be8b96 411 PRINTS PR00173 Glutamate-aspartate symporter signature 4 24 1.7E-14 T 15-10-2018 AM378_16390 999d17ff99120e30daaacbe439be8b96 411 PRINTS PR00173 Glutamate-aspartate symporter signature 183 202 1.7E-14 T 15-10-2018 AM378_16390 999d17ff99120e30daaacbe439be8b96 411 PRINTS PR00173 Glutamate-aspartate symporter signature 285 311 1.7E-14 T 15-10-2018 AM378_16390 999d17ff99120e30daaacbe439be8b96 411 PRINTS PR00173 Glutamate-aspartate symporter signature 320 339 1.7E-14 T 15-10-2018 AM378_16390 999d17ff99120e30daaacbe439be8b96 411 Hamap MF_01582 Serine/threonine transporter SstT [sstT]. 1 402 36.983 T 15-10-2018 IPR023025 Serine/threonine transporter SstT GO:0015293|GO:0015826|GO:0032329 AM378_16390 999d17ff99120e30daaacbe439be8b96 411 SUPERFAMILY SSF118215 13 395 4.71E-95 T 15-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 AM378_16390 999d17ff99120e30daaacbe439be8b96 411 Pfam PF00375 Sodium:dicarboxylate symporter family 13 392 3.9E-62 T 15-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AM378_16390 999d17ff99120e30daaacbe439be8b96 411 Gene3D G3DSA:1.10.3860.10 3 401 2.0E-71 T 15-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 AM378_22190 3824c8276aabd198d41b37ccbe09d081 281 SUPERFAMILY SSF56529 62 279 3.53E-81 T 15-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 AM378_22190 3824c8276aabd198d41b37ccbe09d081 281 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 72 277 3.0E-68 T 15-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 AM378_22190 3824c8276aabd198d41b37ccbe09d081 281 Gene3D G3DSA:3.90.850.10 54 280 1.4E-84 T 15-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 AM378_21530 05c3dec7043e465153f22f317a9cffa4 241 TIGRFAM TIGR02325 C_P_lyase_phnF: phosphonate metabolism transcriptional regulator PhnF 6 241 1.8E-84 T 15-10-2018 IPR012702 Phosphonate C-P lyase system, transcriptional regulator PhnF AM378_21530 05c3dec7043e465153f22f317a9cffa4 241 SMART SM00345 17 75 3.3E-21 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM378_21530 05c3dec7043e465153f22f317a9cffa4 241 Pfam PF00392 Bacterial regulatory proteins, gntR family 14 75 5.1E-20 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM378_21530 05c3dec7043e465153f22f317a9cffa4 241 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 35 49 1.2E-8 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM378_21530 05c3dec7043e465153f22f317a9cffa4 241 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 49 65 1.2E-8 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM378_21530 05c3dec7043e465153f22f317a9cffa4 241 SUPERFAMILY SSF64288 63 240 4.71E-37 T 15-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily AM378_21530 05c3dec7043e465153f22f317a9cffa4 241 Gene3D G3DSA:1.10.10.10 3 75 2.9E-19 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_21530 05c3dec7043e465153f22f317a9cffa4 241 SUPERFAMILY SSF46785 11 82 7.19E-18 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM378_21530 05c3dec7043e465153f22f317a9cffa4 241 Gene3D G3DSA:3.40.1410.10 84 241 1.1E-37 T 15-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily AM378_21530 05c3dec7043e465153f22f317a9cffa4 241 SMART SM00866 96 236 3.6E-27 T 15-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 AM378_21530 05c3dec7043e465153f22f317a9cffa4 241 Pfam PF07702 UTRA domain 96 235 2.1E-28 T 15-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 AM378_17335 7ad7f16d75d36161701794a4264d7f65 180 SUPERFAMILY SSF51161 5 175 1.66E-43 T 15-10-2018 IPR011004 Trimeric LpxA-like superfamily AM378_17335 7ad7f16d75d36161701794a4264d7f65 180 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 13 47 1.8E-4 T 15-10-2018 IPR001451 Hexapeptide repeat AM378_17335 7ad7f16d75d36161701794a4264d7f65 180 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 98 131 3.0E-7 T 15-10-2018 IPR001451 Hexapeptide repeat AM378_17335 7ad7f16d75d36161701794a4264d7f65 180 Gene3D G3DSA:2.160.10.10 1 180 4.7E-54 T 15-10-2018 AM378_04380 893dd43606ba037e4ec4cdc83bfcf655 258 Pfam PF01026 TatD related DNase 4 255 3.6E-77 T 15-10-2018 IPR001130 TatD family GO:0016788 AM378_04380 893dd43606ba037e4ec4cdc83bfcf655 258 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 3 11 - T 15-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 AM378_04380 893dd43606ba037e4ec4cdc83bfcf655 258 Gene3D G3DSA:3.20.20.140 1 258 4.5E-100 T 15-10-2018 AM378_04380 893dd43606ba037e4ec4cdc83bfcf655 258 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 191 207 - T 15-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 AM378_04380 893dd43606ba037e4ec4cdc83bfcf655 258 PIRSF PIRSF005902 1 258 1.2E-75 T 15-10-2018 IPR001130 TatD family GO:0016788 AM378_04380 893dd43606ba037e4ec4cdc83bfcf655 258 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 3 256 3.4E-93 T 15-10-2018 IPR015991 Uncharacterised hydrolase TatD-type GO:0004536 AM378_04380 893dd43606ba037e4ec4cdc83bfcf655 258 SUPERFAMILY SSF51556 1 257 1.01E-86 T 15-10-2018 IPR032466 Metal-dependent hydrolase AM378_07005 fe4627d739dd99757043b5d127be18ae 340 Pfam PF00356 Bacterial regulatory proteins, lacI family 10 53 5.8E-13 T 15-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM378_07005 fe4627d739dd99757043b5d127be18ae 340 SMART SM00354 6 76 7.1E-22 T 15-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM378_07005 fe4627d739dd99757043b5d127be18ae 340 Gene3D G3DSA:1.10.260.40 1 60 7.5E-21 T 15-10-2018 AM378_07005 fe4627d739dd99757043b5d127be18ae 340 Gene3D G3DSA:3.40.50.2300 61 310 2.8E-51 T 15-10-2018 AM378_07005 fe4627d739dd99757043b5d127be18ae 340 SUPERFAMILY SSF47413 5 64 5.06E-16 T 15-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AM378_07005 fe4627d739dd99757043b5d127be18ae 340 Gene3D G3DSA:3.40.50.2300 165 294 2.8E-51 T 15-10-2018 AM378_07005 fe4627d739dd99757043b5d127be18ae 340 SUPERFAMILY SSF53822 63 313 2.78E-45 T 15-10-2018 IPR028082 Periplasmic binding protein-like I AM378_07005 fe4627d739dd99757043b5d127be18ae 340 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 65 267 1.2E-22 T 15-10-2018 IPR001761 Periplasmic binding protein/LacI sugar binding domain AM378_01215 2c0ff45f1abdc7b0283a9719c2decbbc 350 Gene3D G3DSA:3.30.428.10 44 175 4.2E-56 T 15-10-2018 IPR036265 HIT-like superfamily AM378_01215 2c0ff45f1abdc7b0283a9719c2decbbc 350 Pfam PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain 183 346 5.2E-70 T 15-10-2018 IPR005850 Galactose-1-phosphate uridyl transferase, C-terminal GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 AM378_01215 2c0ff45f1abdc7b0283a9719c2decbbc 350 Pfam PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain 3 176 1.7E-68 T 15-10-2018 IPR005849 Galactose-1-phosphate uridyl transferase, N-terminal GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 AM378_01215 2c0ff45f1abdc7b0283a9719c2decbbc 350 TIGRFAM TIGR00209 galT_1: galactose-1-phosphate uridylyltransferase 1 346 8.8E-201 T 15-10-2018 IPR001937 Galactose-1-phosphate uridyl transferase, class I GO:0008108|GO:0008270|GO:0033499 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 AM378_01215 2c0ff45f1abdc7b0283a9719c2decbbc 350 PIRSF PIRSF000808 1 341 1.4E-123 T 15-10-2018 IPR001937 Galactose-1-phosphate uridyl transferase, class I GO:0008108|GO:0008270|GO:0033499 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 AM378_01215 2c0ff45f1abdc7b0283a9719c2decbbc 350 SUPERFAMILY SSF54197 179 345 4.42E-56 T 15-10-2018 IPR036265 HIT-like superfamily AM378_01215 2c0ff45f1abdc7b0283a9719c2decbbc 350 SUPERFAMILY SSF54197 4 177 2.8E-71 T 15-10-2018 IPR036265 HIT-like superfamily AM378_01215 2c0ff45f1abdc7b0283a9719c2decbbc 350 Gene3D G3DSA:3.30.428.10 176 348 6.3E-69 T 15-10-2018 IPR036265 HIT-like superfamily AM378_01215 2c0ff45f1abdc7b0283a9719c2decbbc 350 ProSitePatterns PS00117 Galactose-1-phosphate uridyl transferase family 1 active site signature. 151 168 - T 15-10-2018 IPR019779 Galactose-1-phosphate uridyl transferase, class I His-active site KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 AM378_11130 59af3bb32725f2f70308d5212bfc97c5 500 SUPERFAMILY SSF53474 284 395 2.62E-7 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold AM378_02830 b11f51aab47ce7f281d61644d5384c63 337 Gene3D G3DSA:3.90.25.10 194 329 1.3E-143 T 15-10-2018 AM378_02830 b11f51aab47ce7f281d61644d5384c63 337 SUPERFAMILY SSF51735 1 336 2.82E-99 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily AM378_02830 b11f51aab47ce7f281d61644d5384c63 337 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 2 335 1.8E-142 T 15-10-2018 IPR005886 UDP-glucose 4-epimerase GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|Reactome: R-HSA-5609977|Reactome: R-HSA-70370 AM378_02830 b11f51aab47ce7f281d61644d5384c63 337 Pfam PF16363 GDP-mannose 4,6 dehydratase 4 324 6.2E-62 T 15-10-2018 IPR016040 NAD(P)-binding domain AM378_02830 b11f51aab47ce7f281d61644d5384c63 337 PRINTS PR01713 Nucleotide sugar epimerase signature 295 312 2.8E-5 T 15-10-2018 AM378_02830 b11f51aab47ce7f281d61644d5384c63 337 PRINTS PR01713 Nucleotide sugar epimerase signature 256 271 2.8E-5 T 15-10-2018 AM378_02830 b11f51aab47ce7f281d61644d5384c63 337 PRINTS PR01713 Nucleotide sugar epimerase signature 231 246 2.8E-5 T 15-10-2018 AM378_02830 b11f51aab47ce7f281d61644d5384c63 337 PRINTS PR01713 Nucleotide sugar epimerase signature 29 45 2.8E-5 T 15-10-2018 AM378_02830 b11f51aab47ce7f281d61644d5384c63 337 Gene3D G3DSA:3.40.50.720 3 274 1.3E-143 T 15-10-2018 AM378_00720 529d89a465ddedb4010e5fd3e3979baa 234 Hamap MF_01216 FMN-dependent NADH-azoreductase [azoR]. 2 199 31.75 T 15-10-2018 IPR023048 NADH-azoreductase, FMN-dependent GO:0016661|GO:0055114 AM378_00720 529d89a465ddedb4010e5fd3e3979baa 234 Pfam PF02525 Flavodoxin-like fold 3 194 7.5E-43 T 15-10-2018 IPR003680 Flavodoxin-like fold AM378_00720 529d89a465ddedb4010e5fd3e3979baa 234 SUPERFAMILY SSF52218 1 199 5.76E-53 T 15-10-2018 IPR029039 Flavoprotein-like superfamily AM378_00720 529d89a465ddedb4010e5fd3e3979baa 234 Gene3D G3DSA:3.40.50.360 1 200 2.2E-57 T 15-10-2018 IPR029039 Flavoprotein-like superfamily AM378_10305 2986c37b25f2eee08c2f692b3bbf0125 517 SMART SM00267 341 517 8.1E-59 T 15-10-2018 IPR000160 GGDEF domain AM378_10305 2986c37b25f2eee08c2f692b3bbf0125 517 Gene3D G3DSA:3.30.450.20 43 195 5.5E-41 T 15-10-2018 AM378_10305 2986c37b25f2eee08c2f692b3bbf0125 517 Pfam PF02743 Cache domain 53 282 7.9E-20 T 15-10-2018 IPR033479 Double Cache domain 1 AM378_10305 2986c37b25f2eee08c2f692b3bbf0125 517 Gene3D G3DSA:3.30.70.270 337 516 1.3E-54 T 15-10-2018 AM378_10305 2986c37b25f2eee08c2f692b3bbf0125 517 Pfam PF00990 Diguanylate cyclase, GGDEF domain 352 512 2.3E-48 T 15-10-2018 IPR000160 GGDEF domain AM378_10305 2986c37b25f2eee08c2f692b3bbf0125 517 SUPERFAMILY SSF55073 357 515 2.79E-45 T 15-10-2018 IPR029787 Nucleotide cyclase AM378_10305 2986c37b25f2eee08c2f692b3bbf0125 517 Gene3D G3DSA:3.30.450.20 197 288 4.6E-23 T 15-10-2018 AM378_10305 2986c37b25f2eee08c2f692b3bbf0125 517 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 348 515 1.6E-50 T 15-10-2018 IPR000160 GGDEF domain AM378_17415 4157208684c94686d88d743bda4a1b43 206 Pfam PF00163 Ribosomal protein S4/S9 N-terminal domain 3 95 9.8E-33 T 15-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 AM378_17415 4157208684c94686d88d743bda4a1b43 206 TIGRFAM TIGR01017 rpsD_bact: ribosomal protein uS4 3 206 7.2E-87 T 15-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 AM378_17415 4157208684c94686d88d743bda4a1b43 206 Gene3D G3DSA:3.10.290.10 103 191 1.7E-36 T 15-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 AM378_17415 4157208684c94686d88d743bda4a1b43 206 SMART SM00363 96 160 5.3E-20 T 15-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM378_17415 4157208684c94686d88d743bda4a1b43 206 Pfam PF01479 S4 domain 97 143 2.3E-18 T 15-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM378_17415 4157208684c94686d88d743bda4a1b43 206 ProSitePatterns PS00632 Ribosomal protein S4 signature. 94 118 - T 15-10-2018 IPR018079 Ribosomal protein S4, conserved site GO:0005622|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6790901|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM378_17415 4157208684c94686d88d743bda4a1b43 206 Gene3D G3DSA:1.10.1050.10 1 102 2.6E-46 T 15-10-2018 AM378_17415 4157208684c94686d88d743bda4a1b43 206 SMART SM01390 3 95 3.8E-50 T 15-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 AM378_17415 4157208684c94686d88d743bda4a1b43 206 SUPERFAMILY SSF55174 3 206 8.9E-73 T 15-10-2018 AM378_17415 4157208684c94686d88d743bda4a1b43 206 Hamap MF_01306_B 30S ribosomal protein S4 [rpsD]. 1 206 36.412 T 15-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 AM378_17555 0e2ddad6f2f17dd7d43a0d4bea17dd86 394 SUPERFAMILY SSF52540 6 219 2.58E-60 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_17555 0e2ddad6f2f17dd7d43a0d4bea17dd86 394 Pfam PF03143 Elongation factor Tu C-terminal domain 298 392 1.3E-33 T 15-10-2018 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal AM378_17555 0e2ddad6f2f17dd7d43a0d4bea17dd86 394 Pfam PF00009 Elongation factor Tu GTP binding domain 10 201 4.6E-59 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM378_17555 0e2ddad6f2f17dd7d43a0d4bea17dd86 394 Gene3D G3DSA:2.40.30.10 206 334 4.9E-53 T 15-10-2018 AM378_17555 0e2ddad6f2f17dd7d43a0d4bea17dd86 394 SUPERFAMILY SSF50447 205 301 1.71E-30 T 15-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily AM378_17555 0e2ddad6f2f17dd7d43a0d4bea17dd86 394 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 2 393 2.0E-237 T 15-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AM378_17555 0e2ddad6f2f17dd7d43a0d4bea17dd86 394 Gene3D G3DSA:3.40.50.300 1 203 4.9E-71 T 15-10-2018 AM378_17555 0e2ddad6f2f17dd7d43a0d4bea17dd86 394 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 15-10-2018 IPR031157 Tr-type G domain, conserved site AM378_17555 0e2ddad6f2f17dd7d43a0d4bea17dd86 394 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 148 9.7E-15 T 15-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 AM378_17555 0e2ddad6f2f17dd7d43a0d4bea17dd86 394 PRINTS PR00315 GTP-binding elongation factor signature 14 27 2.0E-24 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM378_17555 0e2ddad6f2f17dd7d43a0d4bea17dd86 394 PRINTS PR00315 GTP-binding elongation factor signature 58 66 2.0E-24 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM378_17555 0e2ddad6f2f17dd7d43a0d4bea17dd86 394 PRINTS PR00315 GTP-binding elongation factor signature 94 105 2.0E-24 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM378_17555 0e2ddad6f2f17dd7d43a0d4bea17dd86 394 PRINTS PR00315 GTP-binding elongation factor signature 131 140 2.0E-24 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM378_17555 0e2ddad6f2f17dd7d43a0d4bea17dd86 394 PRINTS PR00315 GTP-binding elongation factor signature 78 88 2.0E-24 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM378_17555 0e2ddad6f2f17dd7d43a0d4bea17dd86 394 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 394 60.881 T 15-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AM378_17555 0e2ddad6f2f17dd7d43a0d4bea17dd86 394 Gene3D G3DSA:2.40.30.10 338 393 1.7E-29 T 15-10-2018 AM378_17555 0e2ddad6f2f17dd7d43a0d4bea17dd86 394 SUPERFAMILY SSF50465 298 393 5.18E-36 T 15-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal AM378_17555 0e2ddad6f2f17dd7d43a0d4bea17dd86 394 Pfam PF03144 Elongation factor Tu domain 2 225 293 3.9E-17 T 15-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 AM378_15810 a0dc36319bd29a7075695635d630a6da 308 Gene3D G3DSA:3.40.1190.20 1 308 3.9E-96 T 15-10-2018 IPR029056 Ribokinase-like AM378_15810 a0dc36319bd29a7075695635d630a6da 308 Pfam PF00294 pfkB family carbohydrate kinase 2 298 2.5E-69 T 15-10-2018 IPR011611 Carbohydrate kinase PfkB AM378_15810 a0dc36319bd29a7075695635d630a6da 308 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 245 258 - T 15-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 AM378_15810 a0dc36319bd29a7075695635d630a6da 308 PRINTS PR00990 Ribokinase signature 216 227 2.4E-5 T 15-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 AM378_15810 a0dc36319bd29a7075695635d630a6da 308 PRINTS PR00990 Ribokinase signature 23 42 2.4E-5 T 15-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 AM378_15810 a0dc36319bd29a7075695635d630a6da 308 SUPERFAMILY SSF53613 1 307 6.39E-84 T 15-10-2018 IPR029056 Ribokinase-like AM378_15810 a0dc36319bd29a7075695635d630a6da 308 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 28 52 - T 15-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 AM378_20040 6115c24e1d03a156557c1e000a560854 361 Pfam PF07429 4-alpha-L-fucosyltransferase glycosyl transferase group 56 1 357 5.6E-184 T 15-10-2018 IPR009993 TDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase GO:0008417|GO:0009246|GO:0036065 AM378_20040 6115c24e1d03a156557c1e000a560854 361 Hamap MF_01002 TDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase [wecF]. 1 361 68.086 T 15-10-2018 IPR009993 TDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase GO:0008417|GO:0009246|GO:0036065 AM378_17575 b0ac28e00d5803faa1eb11c9ec5aa84a 95 Gene3D G3DSA:3.40.1260.10 1 95 1.8E-30 T 15-10-2018 IPR027396 DsrEFH-like AM378_17575 b0ac28e00d5803faa1eb11c9ec5aa84a 95 SUPERFAMILY SSF75169 1 95 6.77E-29 T 15-10-2018 IPR027396 DsrEFH-like AM378_17575 b0ac28e00d5803faa1eb11c9ec5aa84a 95 TIGRFAM TIGR03011 sulf_tusB_dsrH: sulfur relay protein TusB/DsrH 2 95 8.9E-30 T 15-10-2018 IPR007215 Sulphur relay, TusB/DsrH GO:0002143|GO:0005737 AM378_17575 b0ac28e00d5803faa1eb11c9ec5aa84a 95 Hamap MF_01564 Protein TusB [tusB]. 1 95 27.78 T 15-10-2018 IPR023526 Sulphur relay, TusB GO:0002143|GO:0005737 AM378_17575 b0ac28e00d5803faa1eb11c9ec5aa84a 95 Pfam PF04077 DsrH like protein 7 91 1.6E-27 T 15-10-2018 IPR007215 Sulphur relay, TusB/DsrH GO:0002143|GO:0005737 AM378_11985 cb98e5b413a1884b4e433476eda3cb8e 257 SUPERFAMILY SSF51182 13 184 5.78E-13 T 15-10-2018 IPR011051 RmlC-like cupin domain superfamily AM378_11985 cb98e5b413a1884b4e433476eda3cb8e 257 Pfam PF12833 Helix-turn-helix domain 179 256 8.1E-23 T 15-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM378_11985 cb98e5b413a1884b4e433476eda3cb8e 257 SUPERFAMILY SSF46689 209 256 3.18E-9 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AM378_11985 cb98e5b413a1884b4e433476eda3cb8e 257 Gene3D G3DSA:1.10.10.60 158 257 4.5E-23 T 15-10-2018 AM378_11985 cb98e5b413a1884b4e433476eda3cb8e 257 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 224 239 2.9E-5 T 15-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM378_11985 cb98e5b413a1884b4e433476eda3cb8e 257 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 239 255 2.9E-5 T 15-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM378_11985 cb98e5b413a1884b4e433476eda3cb8e 257 SMART SM00342 173 255 1.1E-23 T 15-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM378_11985 cb98e5b413a1884b4e433476eda3cb8e 257 Gene3D G3DSA:2.60.120.10 11 93 2.7E-10 T 15-10-2018 IPR014710 RmlC-like jelly roll fold AM378_11985 cb98e5b413a1884b4e433476eda3cb8e 257 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 208 251 - T 15-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AM378_11985 cb98e5b413a1884b4e433476eda3cb8e 257 Pfam PF02311 AraC-like ligand binding domain 20 77 1.2E-5 T 15-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 AM378_00705 e55a2775a097ebac1055a6d53303447f 186 Pfam PF04390 Lipopolysaccharide-assembly 35 159 1.7E-16 T 15-10-2018 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 AM378_00705 e55a2775a097ebac1055a6d53303447f 186 Hamap MF_01186 LPS-assembly lipoprotein LptE [lptE]. 5 164 28.063 T 15-10-2018 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 AM378_00705 e55a2775a097ebac1055a6d53303447f 186 Gene3D G3DSA:3.30.160.150 20 169 4.7E-65 T 15-10-2018 AM378_22095 01df06a5bcff0e39e0d52a22682cfffb 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 126 134 8.2E-5 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_22095 01df06a5bcff0e39e0d52a22682cfffb 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 74 85 8.2E-5 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_22095 01df06a5bcff0e39e0d52a22682cfffb 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 146 165 8.2E-5 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_22095 01df06a5bcff0e39e0d52a22682cfffb 260 Gene3D G3DSA:3.40.50.720 1 255 1.7E-68 T 15-10-2018 AM378_22095 01df06a5bcff0e39e0d52a22682cfffb 260 SUPERFAMILY SSF51735 2 250 1.54E-68 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily AM378_22095 01df06a5bcff0e39e0d52a22682cfffb 260 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 133 161 - T 15-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AM378_22095 01df06a5bcff0e39e0d52a22682cfffb 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 3.2E-33 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_22095 01df06a5bcff0e39e0d52a22682cfffb 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 211 231 3.2E-33 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_22095 01df06a5bcff0e39e0d52a22682cfffb 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 167 184 3.2E-33 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_22095 01df06a5bcff0e39e0d52a22682cfffb 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 74 85 3.2E-33 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_22095 01df06a5bcff0e39e0d52a22682cfffb 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 146 165 3.2E-33 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_22095 01df06a5bcff0e39e0d52a22682cfffb 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 120 136 3.2E-33 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_22095 01df06a5bcff0e39e0d52a22682cfffb 260 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 3 181 0.0011 T 15-10-2018 AM378_22095 01df06a5bcff0e39e0d52a22682cfffb 260 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 248 6.5E-53 T 15-10-2018 AM378_23215 292621a285ee9a6f806237cb31b64051 282 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 229 271 - T 15-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AM378_23215 292621a285ee9a6f806237cb31b64051 282 Pfam PF12833 Helix-turn-helix domain 202 276 2.3E-18 T 15-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM378_23215 292621a285ee9a6f806237cb31b64051 282 SUPERFAMILY SSF46689 228 278 8.51E-13 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AM378_23215 292621a285ee9a6f806237cb31b64051 282 Pfam PF07883 Cupin domain 36 83 3.7E-9 T 15-10-2018 IPR013096 Cupin 2, conserved barrel AM378_23215 292621a285ee9a6f806237cb31b64051 282 Gene3D G3DSA:1.10.10.60 185 278 5.7E-20 T 15-10-2018 AM378_23215 292621a285ee9a6f806237cb31b64051 282 SMART SM00342 192 275 2.9E-22 T 15-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM378_23215 292621a285ee9a6f806237cb31b64051 282 SUPERFAMILY SSF51182 37 116 2.46E-13 T 15-10-2018 IPR011051 RmlC-like cupin domain superfamily AM378_23215 292621a285ee9a6f806237cb31b64051 282 Gene3D G3DSA:2.60.120.10 26 107 1.3E-11 T 15-10-2018 IPR014710 RmlC-like jelly roll fold AM378_08600 c85b11786a6300ba9133cede2bc26ee8 233 SUPERFAMILY SSF53067 5 105 3.84E-30 T 15-10-2018 AM378_08600 c85b11786a6300ba9133cede2bc26ee8 233 Pfam PF00814 Glycoprotease family 30 154 4.6E-30 T 15-10-2018 IPR000905 Gcp-like domain AM378_08600 c85b11786a6300ba9133cede2bc26ee8 233 TIGRFAM TIGR03725 T6A_YeaZ: tRNA threonylcarbamoyl adenosine modification protein YeaZ 5 221 3.8E-70 T 15-10-2018 IPR022496 tRNA threonylcarbamoyl adenosine modification protein TsaB GO:0002949 AM378_08600 c85b11786a6300ba9133cede2bc26ee8 233 Gene3D G3DSA:3.30.420.40 5 224 3.5E-84 T 15-10-2018 AM378_08600 c85b11786a6300ba9133cede2bc26ee8 233 Gene3D G3DSA:3.30.420.40 96 190 3.5E-84 T 15-10-2018 AM378_08600 c85b11786a6300ba9133cede2bc26ee8 233 SUPERFAMILY SSF53067 110 219 2.98E-29 T 15-10-2018 AM378_22015 dc5a29d18e15a09cae9c00c018f68f62 458 Pfam PF13520 Amino acid permease 14 430 8.2E-35 T 15-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 AM378_22015 dc5a29d18e15a09cae9c00c018f68f62 458 PIRSF PIRSF006060 1 445 2.5E-53 T 15-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 AM378_22015 dc5a29d18e15a09cae9c00c018f68f62 458 Gene3D G3DSA:1.20.1740.10 10 446 3.4E-54 T 15-10-2018 AM378_10110 53fdc0ce6cd900bb4643d4c0a3ce063d 170 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 38 68 - T 15-10-2018 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM378_10110 53fdc0ce6cd900bb4643d4c0a3ce063d 170 SUPERFAMILY SSF88659 108 164 5.23E-13 T 15-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like AM378_10110 53fdc0ce6cd900bb4643d4c0a3ce063d 170 Gene3D G3DSA:1.10.1740.10 1 78 2.9E-7 T 15-10-2018 AM378_10110 53fdc0ce6cd900bb4643d4c0a3ce063d 170 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 14 160 1.7E-21 T 15-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 AM378_10110 53fdc0ce6cd900bb4643d4c0a3ce063d 170 Gene3D G3DSA:1.10.10.10 106 163 2.1E-12 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_10110 53fdc0ce6cd900bb4643d4c0a3ce063d 170 Pfam PF04542 Sigma-70 region 2 16 80 3.5E-11 T 15-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 AM378_10110 53fdc0ce6cd900bb4643d4c0a3ce063d 170 SUPERFAMILY SSF88946 14 101 5.89E-13 T 15-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 AM378_10110 53fdc0ce6cd900bb4643d4c0a3ce063d 170 Pfam PF08281 Sigma-70, region 4 112 160 3.2E-14 T 15-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM378_01545 1d06df7056c06ec090c3384e76ad4694 283 Gene3D G3DSA:1.10.3670.10 69 185 6.3E-24 T 15-10-2018 AM378_01545 1d06df7056c06ec090c3384e76ad4694 283 SUPERFAMILY SSF54001 45 281 1.47E-78 T 15-10-2018 IPR038765 Papain-like cysteine peptidase superfamily AM378_01545 1d06df7056c06ec090c3384e76ad4694 283 Pfam PF07313 Protein of unknown function (DUF1460) 76 273 1.3E-76 T 15-10-2018 IPR010846 Protein of unknown function DUF1460 AM378_01545 1d06df7056c06ec090c3384e76ad4694 283 Gene3D G3DSA:2.30.260.10 186 282 1.6E-22 T 15-10-2018 AM378_14685 fe466e8e4f8755d515556ad15794291d 225 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 160 217 3.1E-17 T 15-10-2018 IPR016148 Pili assembly chaperone, C-terminal AM378_14685 fe466e8e4f8755d515556ad15794291d 225 PRINTS PR00969 Pili chaperone signature 155 170 7.9E-38 T 15-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM378_14685 fe466e8e4f8755d515556ad15794291d 225 PRINTS PR00969 Pili chaperone signature 69 90 7.9E-38 T 15-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM378_14685 fe466e8e4f8755d515556ad15794291d 225 PRINTS PR00969 Pili chaperone signature 120 135 7.9E-38 T 15-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM378_14685 fe466e8e4f8755d515556ad15794291d 225 PRINTS PR00969 Pili chaperone signature 24 33 7.9E-38 T 15-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM378_14685 fe466e8e4f8755d515556ad15794291d 225 PRINTS PR00969 Pili chaperone signature 97 114 7.9E-38 T 15-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM378_14685 fe466e8e4f8755d515556ad15794291d 225 ProSitePatterns PS00635 Gram-negative pili assembly chaperone signature. 96 113 - T 15-10-2018 IPR018046 Pili assembly chaperone, conserved site AM378_14685 fe466e8e4f8755d515556ad15794291d 225 Gene3D G3DSA:2.60.40.10 24 136 1.1E-42 T 15-10-2018 IPR013783 Immunoglobulin-like fold AM378_14685 fe466e8e4f8755d515556ad15794291d 225 SUPERFAMILY SSF49584 140 221 4.71E-24 T 15-10-2018 IPR036316 Pili assembly chaperone, C-terminal domain superfamily AM378_14685 fe466e8e4f8755d515556ad15794291d 225 Gene3D G3DSA:2.60.40.10 140 224 1.2E-26 T 15-10-2018 IPR013783 Immunoglobulin-like fold AM378_14685 fe466e8e4f8755d515556ad15794291d 225 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 23 138 3.6E-45 T 15-10-2018 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 AM378_14685 fe466e8e4f8755d515556ad15794291d 225 SUPERFAMILY SSF49354 19 138 7.85E-44 T 15-10-2018 IPR008962 PapD-like superfamily AM378_20610 1560b08ecf6ea7c8931412aab87b3603 142 Gene3D G3DSA:3.30.1550.10 2 72 6.6E-35 T 15-10-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily AM378_20610 1560b08ecf6ea7c8931412aab87b3603 142 TIGRFAM TIGR01632 L11_bact: ribosomal protein uL11 3 142 1.0E-65 T 15-10-2018 IPR006519 Ribosomal protein L11, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM378_20610 1560b08ecf6ea7c8931412aab87b3603 142 SMART SM00649 9 141 1.1E-84 T 15-10-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 AM378_20610 1560b08ecf6ea7c8931412aab87b3603 142 Pfam PF00298 Ribosomal protein L11, RNA binding domain 72 140 6.4E-25 T 15-10-2018 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 AM378_20610 1560b08ecf6ea7c8931412aab87b3603 142 ProDom PD001367 RIBOSOMAL RIBONUCLEOPROTEIN L11 RRNA-BINDING RNA-BINDING METHYLATION 50S L11 BACTERIAL CHLOROPLAST 36 74 2.0E-16 T 15-10-2018 AM378_20610 1560b08ecf6ea7c8931412aab87b3603 142 SUPERFAMILY SSF46906 68 141 2.35E-26 T 15-10-2018 IPR036769 Ribosomal protein L11, C-terminal domain superfamily AM378_20610 1560b08ecf6ea7c8931412aab87b3603 142 SUPERFAMILY SSF54747 3 73 5.23E-30 T 15-10-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily AM378_20610 1560b08ecf6ea7c8931412aab87b3603 142 Hamap MF_00736 50S ribosomal protein L11 [rplK]. 5 142 30.634 T 15-10-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 AM378_20610 1560b08ecf6ea7c8931412aab87b3603 142 ProSitePatterns PS00359 Ribosomal protein L11 signature. 127 142 - T 15-10-2018 IPR020785 Ribosomal protein L11, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM378_20610 1560b08ecf6ea7c8931412aab87b3603 142 Pfam PF03946 Ribosomal protein L11, N-terminal domain 9 67 9.1E-30 T 15-10-2018 IPR020784 Ribosomal protein L11, N-terminal AM378_20610 1560b08ecf6ea7c8931412aab87b3603 142 Gene3D G3DSA:1.10.10.250 73 141 2.4E-27 T 15-10-2018 IPR036769 Ribosomal protein L11, C-terminal domain superfamily AM378_02955 cafb542bc32be04f9541f22263de2089 327 Gene3D G3DSA:1.20.58.340 251 327 2.8E-17 T 15-10-2018 AM378_02955 cafb542bc32be04f9541f22263de2089 327 SUPERFAMILY SSF144083 262 323 5.89E-16 T 15-10-2018 AM378_02955 cafb542bc32be04f9541f22263de2089 327 SUPERFAMILY SSF143865 6 259 3.4E-66 T 15-10-2018 AM378_02955 cafb542bc32be04f9541f22263de2089 327 TIGRFAM TIGR00383 corA: magnesium and cobalt transport protein CorA 26 327 2.8E-60 T 15-10-2018 IPR004488 Magnesium/cobalt transport protein CorA GO:0006824|GO:0015087|GO:0015095|GO:0015693|GO:0016020 AM378_02955 cafb542bc32be04f9541f22263de2089 327 Pfam PF01544 CorA-like Mg2+ transporter protein 35 323 1.4E-60 T 15-10-2018 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 AM378_02955 cafb542bc32be04f9541f22263de2089 327 Gene3D G3DSA:1.20.58.340 137 249 7.0E-29 T 15-10-2018 AM378_02955 cafb542bc32be04f9541f22263de2089 327 Gene3D G3DSA:3.30.460.20 2 136 6.6E-30 T 15-10-2018 AM378_14300 e16b9c4048f4d8298696aec5d5546ade 398 Pfam PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal 146 239 4.3E-36 T 15-10-2018 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal GO:0005515 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 AM378_14300 e16b9c4048f4d8298696aec5d5546ade 398 Pfam PF13288 DXP reductoisomerase C-terminal domain 271 387 4.8E-42 T 15-10-2018 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 AM378_14300 e16b9c4048f4d8298696aec5d5546ade 398 SUPERFAMILY SSF51735 2 150 5.25E-46 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily AM378_14300 e16b9c4048f4d8298696aec5d5546ade 398 Gene3D G3DSA:1.10.1740.10 312 397 9.6E-30 T 15-10-2018 AM378_14300 e16b9c4048f4d8298696aec5d5546ade 398 SUPERFAMILY SSF69055 302 394 5.75E-31 T 15-10-2018 IPR036169 DXP reductoisomerase, C-terminal domain superfamily KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 AM378_14300 e16b9c4048f4d8298696aec5d5546ade 398 Gene3D G3DSA:3.40.50.720 1 150 1.6E-55 T 15-10-2018 AM378_14300 e16b9c4048f4d8298696aec5d5546ade 398 Pfam PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase 4 132 2.7E-46 T 15-10-2018 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal GO:0055114|GO:0070402 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 AM378_14300 e16b9c4048f4d8298696aec5d5546ade 398 Hamap MF_00183 1-deoxy-D-xylulose 5-phosphate reductoisomerase [dxr]. 4 392 46.644 T 15-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 AM378_14300 e16b9c4048f4d8298696aec5d5546ade 398 PIRSF PIRSF006205 1 397 4.0E-154 T 15-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 AM378_14300 e16b9c4048f4d8298696aec5d5546ade 398 TIGRFAM TIGR00243 Dxr: 1-deoxy-D-xylulose 5-phosphate reductoisomerase 1 393 5.4E-180 T 15-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 AM378_14300 e16b9c4048f4d8298696aec5d5546ade 398 SUPERFAMILY SSF55347 126 274 1.34E-62 T 15-10-2018 AM378_05715 9565b399b472f579dee39e23f4a8d112 408 SUPERFAMILY SSF53383 4 404 4.08E-122 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM378_05715 9565b399b472f579dee39e23f4a8d112 408 Gene3D G3DSA:3.40.640.10 43 304 7.6E-165 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AM378_05715 9565b399b472f579dee39e23f4a8d112 408 Pfam PF00266 Aminotransferase class-V 26 396 4.6E-151 T 15-10-2018 IPR000192 Aminotransferase class V domain AM378_05715 9565b399b472f579dee39e23f4a8d112 408 Hamap MF_01831 Cysteine desulfurase [sufS]. 1 408 73.519 T 15-10-2018 IPR010970 Cysteine desulfurase, SufS GO:0006534|GO:0030170|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 AM378_05715 9565b399b472f579dee39e23f4a8d112 408 Gene3D G3DSA:3.90.1150.10 11 397 7.6E-165 T 15-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AM378_05715 9565b399b472f579dee39e23f4a8d112 408 TIGRFAM TIGR01979 sufS: cysteine desulfurase, SufS family 7 407 2.5E-176 T 15-10-2018 IPR010970 Cysteine desulfurase, SufS GO:0006534|GO:0030170|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 AM378_05715 9565b399b472f579dee39e23f4a8d112 408 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 219 238 - T 15-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site AM378_03215 3ed4d46d9dc5696bed417f1e516c3eef 369 Gene3D G3DSA:3.40.190.10 31 337 7.7E-143 T 15-10-2018 AM378_03215 3ed4d46d9dc5696bed417f1e516c3eef 369 SUPERFAMILY SSF53850 28 368 9.06E-106 T 15-10-2018 AM378_03215 3ed4d46d9dc5696bed417f1e516c3eef 369 Gene3D G3DSA:3.40.190.10 135 363 7.7E-143 T 15-10-2018 AM378_03215 3ed4d46d9dc5696bed417f1e516c3eef 369 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 34 50 2.6E-71 T 15-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AM378_03215 3ed4d46d9dc5696bed417f1e516c3eef 369 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 218 237 2.6E-71 T 15-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AM378_03215 3ed4d46d9dc5696bed417f1e516c3eef 369 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 157 171 2.6E-71 T 15-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AM378_03215 3ed4d46d9dc5696bed417f1e516c3eef 369 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 180 199 2.6E-71 T 15-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AM378_03215 3ed4d46d9dc5696bed417f1e516c3eef 369 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 268 287 2.6E-71 T 15-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AM378_03215 3ed4d46d9dc5696bed417f1e516c3eef 369 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 313 339 2.6E-71 T 15-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AM378_03215 3ed4d46d9dc5696bed417f1e516c3eef 369 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 126 142 2.6E-71 T 15-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AM378_03215 3ed4d46d9dc5696bed417f1e516c3eef 369 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 50 71 2.6E-71 T 15-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AM378_03215 3ed4d46d9dc5696bed417f1e516c3eef 369 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 77 91 2.6E-71 T 15-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AM378_03215 3ed4d46d9dc5696bed417f1e516c3eef 369 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 93 106 2.6E-71 T 15-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AM378_03215 3ed4d46d9dc5696bed417f1e516c3eef 369 PIRSF PIRSF019574 1 369 4.3E-141 T 15-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AM378_03215 3ed4d46d9dc5696bed417f1e516c3eef 369 Pfam PF13416 Bacterial extracellular solute-binding protein 45 334 2.0E-37 T 15-10-2018 IPR006059 Bacterial extracellular solute-binding protein AM378_15405 8cd7c5609de9c6e69dbb1fd9379d6028 166 Gene3D G3DSA:3.30.70.560 1 159 2.8E-61 T 15-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 AM378_15405 8cd7c5609de9c6e69dbb1fd9379d6028 166 ProSitePatterns PS00794 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase signature. 89 100 - T 15-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 AM378_15405 8cd7c5609de9c6e69dbb1fd9379d6028 166 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 4 134 2.8E-47 T 15-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 AM378_15405 8cd7c5609de9c6e69dbb1fd9379d6028 166 SUPERFAMILY SSF55083 1 159 2.75E-55 T 15-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 AM378_15405 8cd7c5609de9c6e69dbb1fd9379d6028 166 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 5 134 9.5E-38 T 15-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 AM378_10790 2f6a427b1439706197c2d210a36d767e 252 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 163 186 4.5E-57 T 15-10-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 AM378_10790 2f6a427b1439706197c2d210a36d767e 252 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 228 247 4.5E-57 T 15-10-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 AM378_10790 2f6a427b1439706197c2d210a36d767e 252 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 78 95 4.5E-57 T 15-10-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 AM378_10790 2f6a427b1439706197c2d210a36d767e 252 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 98 118 4.5E-57 T 15-10-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 AM378_10790 2f6a427b1439706197c2d210a36d767e 252 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 202 221 4.5E-57 T 15-10-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 AM378_10790 2f6a427b1439706197c2d210a36d767e 252 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 16 33 4.5E-57 T 15-10-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 AM378_10790 2f6a427b1439706197c2d210a36d767e 252 Gene3D G3DSA:3.40.50.720 1 251 6.1E-74 T 15-10-2018 AM378_10790 2f6a427b1439706197c2d210a36d767e 252 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 135 163 - T 15-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AM378_10790 2f6a427b1439706197c2d210a36d767e 252 TIGRFAM TIGR04316 dhbA_paeA: 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase 12 250 2.0E-110 T 15-10-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 AM378_10790 2f6a427b1439706197c2d210a36d767e 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 128 136 8.7E-8 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_10790 2f6a427b1439706197c2d210a36d767e 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 75 86 8.7E-8 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_10790 2f6a427b1439706197c2d210a36d767e 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 148 167 8.7E-8 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_10790 2f6a427b1439706197c2d210a36d767e 252 SUPERFAMILY SSF51735 4 250 6.71E-73 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily AM378_10790 2f6a427b1439706197c2d210a36d767e 252 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 16 249 2.9E-57 T 15-10-2018 AM378_13370 970d05974c84e8cc85c4632986d57e9e 111 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 13 91 9.9E-15 T 15-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AM378_13370 970d05974c84e8cc85c4632986d57e9e 111 ProSitePatterns PS00814 Adrenodoxin family, iron-sulfur binding region signature. 42 52 - T 15-10-2018 IPR018298 Adrenodoxin, iron-sulphur binding site GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 AM378_13370 970d05974c84e8cc85c4632986d57e9e 111 PRINTS PR00355 Adrenodoxin signature 42 52 1.9E-10 T 15-10-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 AM378_13370 970d05974c84e8cc85c4632986d57e9e 111 PRINTS PR00355 Adrenodoxin signature 60 74 1.9E-10 T 15-10-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 AM378_13370 970d05974c84e8cc85c4632986d57e9e 111 PRINTS PR00355 Adrenodoxin signature 83 91 1.9E-10 T 15-10-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 AM378_13370 970d05974c84e8cc85c4632986d57e9e 111 TIGRFAM TIGR02007 fdx_isc: ferredoxin, 2Fe-2S type, ISC system 2 111 3.2E-62 T 15-10-2018 IPR011536 Ferredoxin 2Fe-2S type, proteobacteria GO:0009055|GO:0051537 AM378_13370 970d05974c84e8cc85c4632986d57e9e 111 SUPERFAMILY SSF54292 4 109 1.62E-33 T 15-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 AM378_13370 970d05974c84e8cc85c4632986d57e9e 111 Gene3D G3DSA:3.10.20.30 1 111 2.0E-35 T 15-10-2018 IPR012675 Beta-grasp domain superfamily AM378_06115 1d4bed6f85b4aec3d21c852946fe6bab 392 ProSitePatterns PS00965 Phosphomannose isomerase type I signature 1. 126 134 - T 15-10-2018 IPR018050 Phosphomannose isomerase, type I, conserved site GO:0004476 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 AM378_06115 1d4bed6f85b4aec3d21c852946fe6bab 392 ProSitePatterns PS00966 Phosphomannose isomerase type I signature 2. 255 280 - T 15-10-2018 IPR018050 Phosphomannose isomerase, type I, conserved site GO:0004476 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 AM378_06115 1d4bed6f85b4aec3d21c852946fe6bab 392 Gene3D G3DSA:2.60.120.10 301 382 1.7E-143 T 15-10-2018 IPR014710 RmlC-like jelly roll fold AM378_06115 1d4bed6f85b4aec3d21c852946fe6bab 392 SUPERFAMILY SSF51182 1 374 1.43E-99 T 15-10-2018 IPR011051 RmlC-like cupin domain superfamily AM378_06115 1d4bed6f85b4aec3d21c852946fe6bab 392 Gene3D G3DSA:2.60.120.10 6 275 1.7E-143 T 15-10-2018 IPR014710 RmlC-like jelly roll fold AM378_06115 1d4bed6f85b4aec3d21c852946fe6bab 392 PIRSF PIRSF001480 1 392 1.7E-105 T 15-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 AM378_06115 1d4bed6f85b4aec3d21c852946fe6bab 392 Gene3D G3DSA:1.10.441.10 150 300 1.7E-143 T 15-10-2018 AM378_06115 1d4bed6f85b4aec3d21c852946fe6bab 392 PRINTS PR00714 Phosphomannose isomerase type I signature 32 47 6.1E-72 T 15-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 AM378_06115 1d4bed6f85b4aec3d21c852946fe6bab 392 PRINTS PR00714 Phosphomannose isomerase type I signature 236 255 6.1E-72 T 15-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 AM378_06115 1d4bed6f85b4aec3d21c852946fe6bab 392 PRINTS PR00714 Phosphomannose isomerase type I signature 274 293 6.1E-72 T 15-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 AM378_06115 1d4bed6f85b4aec3d21c852946fe6bab 392 PRINTS PR00714 Phosphomannose isomerase type I signature 126 149 6.1E-72 T 15-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 AM378_06115 1d4bed6f85b4aec3d21c852946fe6bab 392 PRINTS PR00714 Phosphomannose isomerase type I signature 4 22 6.1E-72 T 15-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 AM378_06115 1d4bed6f85b4aec3d21c852946fe6bab 392 PRINTS PR00714 Phosphomannose isomerase type I signature 81 102 6.1E-72 T 15-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 AM378_06115 1d4bed6f85b4aec3d21c852946fe6bab 392 PRINTS PR00714 Phosphomannose isomerase type I signature 220 235 6.1E-72 T 15-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 AM378_06115 1d4bed6f85b4aec3d21c852946fe6bab 392 PRINTS PR00714 Phosphomannose isomerase type I signature 255 274 6.1E-72 T 15-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 AM378_06115 1d4bed6f85b4aec3d21c852946fe6bab 392 TIGRFAM TIGR00218 manA: mannose-6-phosphate isomerase, class I 2 385 6.2E-115 T 15-10-2018 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 AM378_06115 1d4bed6f85b4aec3d21c852946fe6bab 392 Pfam PF01238 Phosphomannose isomerase type I 1 356 2.1E-98 T 15-10-2018 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 AM378_15825 6b927390e917d3b4508fc4c230e71517 469 Gene3D G3DSA:2.115.10.20 3 350 3.2E-111 T 15-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily AM378_15825 6b927390e917d3b4508fc4c230e71517 469 Pfam PF08244 Glycosyl hydrolases family 32 C terminal 413 446 7.9E-9 T 15-10-2018 IPR013189 Glycosyl hydrolase family 32, C-terminal AM378_15825 6b927390e917d3b4508fc4c230e71517 469 Pfam PF00251 Glycosyl hydrolases family 32 N-terminal domain 31 336 6.9E-99 T 15-10-2018 IPR013148 Glycosyl hydrolase family 32, N-terminal AM378_15825 6b927390e917d3b4508fc4c230e71517 469 Gene3D G3DSA:2.60.120.560 384 466 2.1E-9 T 15-10-2018 AM378_15825 6b927390e917d3b4508fc4c230e71517 469 SMART SM00640 31 432 4.9E-127 T 15-10-2018 IPR001362 Glycoside hydrolase, family 32 GO:0004553|GO:0005975 AM378_15825 6b927390e917d3b4508fc4c230e71517 469 SUPERFAMILY SSF75005 22 336 6.44E-106 T 15-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily AM378_15825 6b927390e917d3b4508fc4c230e71517 469 SUPERFAMILY SSF49899 338 467 9.5E-17 T 15-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily AM378_15825 6b927390e917d3b4508fc4c230e71517 469 TIGRFAM TIGR01322 scrB_fam: sucrose-6-phosphate hydrolase 18 442 9.1E-156 T 15-10-2018 IPR006232 Sucrose-6-phosphate hydrolase GO:0004564|GO:0005737|GO:0005975 KEGG: 00052+3.2.1.26|KEGG: 00500+3.2.1.26 AM378_15825 6b927390e917d3b4508fc4c230e71517 469 ProSitePatterns PS00609 Glycosyl hydrolases family 32 active site. 31 44 - T 15-10-2018 IPR018053 Glycoside hydrolase, family 32, active site GO:0004553|GO:0005975 KEGG: 00052+3.2.1.26|KEGG: 00500+3.2.1.26 AM378_20955 75bf18e14ddd218fe73429d1ad4145ef 130 ProDom PD015900 FUMARATE MEMBRANE REDUCTASE C SUBUNIT TRANSMEMBRANE INNER HYDROPHOBIC REDUCTASE POLYPEPTIDE 8 112 1.0E-36 T 15-10-2018 IPR003510 Fumarate reductase, subunit C GO:0016020 AM378_20955 75bf18e14ddd218fe73429d1ad4145ef 130 PIRSF PIRSF000180 2 130 9.4E-57 T 15-10-2018 IPR003510 Fumarate reductase, subunit C GO:0016020 AM378_20955 75bf18e14ddd218fe73429d1ad4145ef 130 Pfam PF02300 Fumarate reductase subunit C 3 128 2.1E-54 T 15-10-2018 IPR003510 Fumarate reductase, subunit C GO:0016020 AM378_20955 75bf18e14ddd218fe73429d1ad4145ef 130 SUPERFAMILY SSF81343 2 129 5.49E-56 T 15-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AM378_20955 75bf18e14ddd218fe73429d1ad4145ef 130 Gene3D G3DSA:1.20.1300.10 2 130 5.4E-51 T 15-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AM378_20955 75bf18e14ddd218fe73429d1ad4145ef 130 Hamap MF_00708 Fumarate reductase subunit C [frdC]. 2 128 28.33 T 15-10-2018 IPR003510 Fumarate reductase, subunit C GO:0016020 AM378_24085 3ca765dd31be143e778044e6c591aebe 257 Pfam PF01614 Bacterial transcriptional regulator 127 245 6.8E-17 T 15-10-2018 IPR014757 Transcription regulator IclR, C-terminal AM378_24085 3ca765dd31be143e778044e6c591aebe 257 Gene3D G3DSA:3.30.450.40 79 253 9.4E-33 T 15-10-2018 IPR029016 GAF-like domain superfamily AM378_24085 3ca765dd31be143e778044e6c591aebe 257 SUPERFAMILY SSF55781 64 248 2.29E-33 T 15-10-2018 AM378_24085 3ca765dd31be143e778044e6c591aebe 257 Pfam PF09339 IclR helix-turn-helix domain 3 59 4.0E-12 T 15-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 AM378_24085 3ca765dd31be143e778044e6c591aebe 257 SUPERFAMILY SSF46785 2 78 1.75E-11 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM378_24085 3ca765dd31be143e778044e6c591aebe 257 SMART SM00346 1 95 1.5E-11 T 15-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 AM378_24085 3ca765dd31be143e778044e6c591aebe 257 Gene3D G3DSA:1.10.10.10 1 67 5.5E-19 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_18430 9075b9f15cf3ca8d70bc2f66bd9aeeff 1007 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 465 496 1.5E-11 T 15-10-2018 IPR013425 Autotransporter-associated beta strand repeat AM378_18430 9075b9f15cf3ca8d70bc2f66bd9aeeff 1007 Gene3D G3DSA:3.40.50.200 10 396 7.2E-70 T 15-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 AM378_18430 9075b9f15cf3ca8d70bc2f66bd9aeeff 1007 Pfam PF12951 Passenger-associated-transport-repeat 466 495 7.9E-11 T 15-10-2018 IPR013425 Autotransporter-associated beta strand repeat AM378_18430 9075b9f15cf3ca8d70bc2f66bd9aeeff 1007 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 530 1007 3.4E-94 T 15-10-2018 IPR006315 Outer membrane autotransporter barrel GO:0019867 AM378_18430 9075b9f15cf3ca8d70bc2f66bd9aeeff 1007 PRINTS PR00723 Subtilisin serine protease family (S8) signature 54 73 1.7E-13 T 15-10-2018 IPR015500 Peptidase S8, subtilisin-related AM378_18430 9075b9f15cf3ca8d70bc2f66bd9aeeff 1007 PRINTS PR00723 Subtilisin serine protease family (S8) signature 335 351 1.7E-13 T 15-10-2018 IPR015500 Peptidase S8, subtilisin-related AM378_18430 9075b9f15cf3ca8d70bc2f66bd9aeeff 1007 PRINTS PR00723 Subtilisin serine protease family (S8) signature 116 129 1.7E-13 T 15-10-2018 IPR015500 Peptidase S8, subtilisin-related AM378_18430 9075b9f15cf3ca8d70bc2f66bd9aeeff 1007 SMART SM00869 734 997 8.0E-53 T 15-10-2018 IPR005546 Autotransporter beta-domain AM378_18430 9075b9f15cf3ca8d70bc2f66bd9aeeff 1007 Gene3D G3DSA:2.40.128.130 684 1007 2.9E-80 T 15-10-2018 IPR036709 Autotransporter beta-domain superfamily AM378_18430 9075b9f15cf3ca8d70bc2f66bd9aeeff 1007 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 336 346 - T 15-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site AM378_18430 9075b9f15cf3ca8d70bc2f66bd9aeeff 1007 Pfam PF00082 Subtilase family 54 386 6.5E-46 T 15-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 AM378_18430 9075b9f15cf3ca8d70bc2f66bd9aeeff 1007 Pfam PF03797 Autotransporter beta-domain 737 987 2.3E-59 T 15-10-2018 IPR005546 Autotransporter beta-domain AM378_18430 9075b9f15cf3ca8d70bc2f66bd9aeeff 1007 SUPERFAMILY SSF52743 36 396 6.15E-63 T 15-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 AM378_18430 9075b9f15cf3ca8d70bc2f66bd9aeeff 1007 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 120 130 - T 15-10-2018 IPR022398 Peptidase S8, subtilisin, His-active site AM378_18430 9075b9f15cf3ca8d70bc2f66bd9aeeff 1007 SUPERFAMILY SSF103515 692 1007 1.09E-69 T 15-10-2018 IPR036709 Autotransporter beta-domain superfamily AM378_09810 f8bbd73e2f2deaa7ff199fecb526e859 673 SUPERFAMILY SSF47226 5 126 3.64E-31 T 15-10-2018 IPR036641 HPT domain superfamily GO:0000160 AM378_09810 f8bbd73e2f2deaa7ff199fecb526e859 673 Pfam PF09078 CheY binding 162 224 4.4E-24 T 15-10-2018 IPR015162 CheY binding AM378_09810 f8bbd73e2f2deaa7ff199fecb526e859 673 SUPERFAMILY SSF55874 346 526 7.33E-35 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AM378_09810 f8bbd73e2f2deaa7ff199fecb526e859 673 SUPERFAMILY SSF55052 161 225 1.73E-19 T 15-10-2018 IPR035891 CheY-binding domain of CheA AM378_09810 f8bbd73e2f2deaa7ff199fecb526e859 673 SMART SM00260 520 660 6.5E-43 T 15-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 AM378_09810 f8bbd73e2f2deaa7ff199fecb526e859 673 Pfam PF01584 CheW-like domain 533 659 2.2E-26 T 15-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 AM378_09810 f8bbd73e2f2deaa7ff199fecb526e859 673 Gene3D G3DSA:3.30.565.10 344 527 1.3E-55 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AM378_09810 f8bbd73e2f2deaa7ff199fecb526e859 673 Gene3D G3DSA:1.10.287.560 280 343 3.6E-17 T 15-10-2018 IPR037006 Histidine kinase CheA-like, homodimeric domain superfamily GO:0000155|GO:0006935 AM378_09810 f8bbd73e2f2deaa7ff199fecb526e859 673 Gene3D G3DSA:2.30.30.40 528 656 8.2E-39 T 15-10-2018 AM378_09810 f8bbd73e2f2deaa7ff199fecb526e859 673 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 391 527 7.2E-18 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AM378_09810 f8bbd73e2f2deaa7ff199fecb526e859 673 SUPERFAMILY SSF50341 527 659 2.09E-31 T 15-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 AM378_09810 f8bbd73e2f2deaa7ff199fecb526e859 673 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 281 343 3.7E-17 T 15-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 AM378_09810 f8bbd73e2f2deaa7ff199fecb526e859 673 SMART SM01231 280 343 7.4E-22 T 15-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 AM378_09810 f8bbd73e2f2deaa7ff199fecb526e859 673 SUPERFAMILY SSF47384 281 344 2.63E-15 T 15-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AM378_09810 f8bbd73e2f2deaa7ff199fecb526e859 673 Pfam PF01627 Hpt domain 8 104 2.3E-18 T 15-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 AM378_09810 f8bbd73e2f2deaa7ff199fecb526e859 673 PRINTS PR00344 Bacterial sensor protein C-terminal signature 488 506 4.5E-14 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM378_09810 f8bbd73e2f2deaa7ff199fecb526e859 673 PRINTS PR00344 Bacterial sensor protein C-terminal signature 512 525 4.5E-14 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM378_09810 f8bbd73e2f2deaa7ff199fecb526e859 673 PRINTS PR00344 Bacterial sensor protein C-terminal signature 433 447 4.5E-14 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM378_09810 f8bbd73e2f2deaa7ff199fecb526e859 673 PRINTS PR00344 Bacterial sensor protein C-terminal signature 472 482 4.5E-14 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM378_09810 f8bbd73e2f2deaa7ff199fecb526e859 673 SMART SM00387 388 528 1.9E-26 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AM378_09810 f8bbd73e2f2deaa7ff199fecb526e859 673 SMART SM00073 5 102 4.5E-28 T 15-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 AM378_09810 f8bbd73e2f2deaa7ff199fecb526e859 673 Gene3D G3DSA:2.40.50.180 551 615 8.2E-39 T 15-10-2018 AM378_09810 f8bbd73e2f2deaa7ff199fecb526e859 673 Gene3D G3DSA:3.30.70.400 157 228 5.4E-26 T 15-10-2018 IPR035891 CheY-binding domain of CheA AM378_09810 f8bbd73e2f2deaa7ff199fecb526e859 673 Gene3D G3DSA:1.20.120.160 1 144 1.1E-46 T 15-10-2018 IPR036641 HPT domain superfamily GO:0000160 AM378_23395 d29c9fb8ebd6491ab50f7a29a32cace4 857 SMART SM01086 766 855 9.4E-37 T 15-10-2018 IPR019489 Clp ATPase, C-terminal AM378_23395 d29c9fb8ebd6491ab50f7a29a32cace4 857 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 203 335 3.0E-13 T 15-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AM378_23395 d29c9fb8ebd6491ab50f7a29a32cace4 857 Gene3D G3DSA:3.40.50.300 550 764 5.2E-92 T 15-10-2018 AM378_23395 d29c9fb8ebd6491ab50f7a29a32cace4 857 Gene3D G3DSA:3.40.50.300 343 544 5.4E-68 T 15-10-2018 AM378_23395 d29c9fb8ebd6491ab50f7a29a32cace4 857 TIGRFAM TIGR03346 chaperone_ClpB: ATP-dependent chaperone protein ClpB 6 854 0.0 T 15-10-2018 IPR017730 Chaperonin ClpB GO:0005737|GO:0009408|GO:0042026 AM378_23395 d29c9fb8ebd6491ab50f7a29a32cace4 857 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 294 306 - T 15-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 AM378_23395 d29c9fb8ebd6491ab50f7a29a32cace4 857 Gene3D G3DSA:1.10.8.60 766 857 8.3E-27 T 15-10-2018 AM378_23395 d29c9fb8ebd6491ab50f7a29a32cace4 857 Gene3D G3DSA:3.40.50.300 148 342 2.2E-74 T 15-10-2018 AM378_23395 d29c9fb8ebd6491ab50f7a29a32cace4 857 Pfam PF07724 AAA domain (Cdc48 subfamily) 596 760 4.3E-57 T 15-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AM378_23395 d29c9fb8ebd6491ab50f7a29a32cace4 857 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 94 145 3.9E-11 T 15-10-2018 IPR004176 Clp, N-terminal AM378_23395 d29c9fb8ebd6491ab50f7a29a32cace4 857 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 17 68 4.8E-14 T 15-10-2018 IPR004176 Clp, N-terminal AM378_23395 d29c9fb8ebd6491ab50f7a29a32cace4 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 646 664 1.6E-42 T 15-10-2018 IPR001270 ClpA/B family GO:0005524 AM378_23395 d29c9fb8ebd6491ab50f7a29a32cace4 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 708 722 1.6E-42 T 15-10-2018 IPR001270 ClpA/B family GO:0005524 AM378_23395 d29c9fb8ebd6491ab50f7a29a32cace4 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 601 619 1.6E-42 T 15-10-2018 IPR001270 ClpA/B family GO:0005524 AM378_23395 d29c9fb8ebd6491ab50f7a29a32cace4 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 675 693 1.6E-42 T 15-10-2018 IPR001270 ClpA/B family GO:0005524 AM378_23395 d29c9fb8ebd6491ab50f7a29a32cace4 857 Gene3D G3DSA:1.10.1780.10 1 147 3.8E-35 T 15-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 AM378_23395 d29c9fb8ebd6491ab50f7a29a32cace4 857 SMART SM00382 198 343 1.3E-11 T 15-10-2018 IPR003593 AAA+ ATPase domain AM378_23395 d29c9fb8ebd6491ab50f7a29a32cace4 857 SMART SM00382 597 733 5.6E-10 T 15-10-2018 IPR003593 AAA+ ATPase domain AM378_23395 d29c9fb8ebd6491ab50f7a29a32cace4 857 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 631 649 - T 15-10-2018 IPR028299 ClpA/B, conserved site 2 AM378_23395 d29c9fb8ebd6491ab50f7a29a32cace4 857 SUPERFAMILY SSF52540 159 545 8.79E-99 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_23395 d29c9fb8ebd6491ab50f7a29a32cace4 857 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 766 845 3.3E-26 T 15-10-2018 IPR019489 Clp ATPase, C-terminal AM378_23395 d29c9fb8ebd6491ab50f7a29a32cace4 857 SUPERFAMILY SSF81923 4 156 6.97E-42 T 15-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 AM378_23395 d29c9fb8ebd6491ab50f7a29a32cace4 857 SUPERFAMILY SSF52540 546 853 9.98E-86 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_15175 3ccdc6ecefdc2099e62f5d352cf3d821 288 SUPERFAMILY SSF50182 114 179 3.6E-17 T 15-10-2018 IPR010920 LSM domain superfamily AM378_15175 3ccdc6ecefdc2099e62f5d352cf3d821 288 Gene3D G3DSA:3.30.70.100 179 273 2.3E-23 T 15-10-2018 AM378_15175 3ccdc6ecefdc2099e62f5d352cf3d821 288 SUPERFAMILY SSF82689 181 278 5.1E-30 T 15-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 AM378_15175 3ccdc6ecefdc2099e62f5d352cf3d821 288 Pfam PF00924 Mechanosensitive ion channel 72 268 7.3E-57 T 15-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 AM378_15175 3ccdc6ecefdc2099e62f5d352cf3d821 288 ProSitePatterns PS01246 Uncharacterized protein family UPF0003 signature. 143 177 - T 15-10-2018 IPR006686 Mechanosensitive ion channel MscS, conserved site GO:0016020 AM378_15175 3ccdc6ecefdc2099e62f5d352cf3d821 288 Pfam PF05552 Conserved TM helix 15 64 1.2E-13 T 15-10-2018 IPR008910 Conserved TM helix AM378_15175 3ccdc6ecefdc2099e62f5d352cf3d821 288 Gene3D G3DSA:2.30.30.60 129 178 4.0E-23 T 15-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily AM378_15175 3ccdc6ecefdc2099e62f5d352cf3d821 288 SUPERFAMILY SSF82861 28 112 6.28E-17 T 15-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 AM378_00680 0d3928c127226634663627a9aaea23ea 631 Gene3D G3DSA:3.40.710.10 249 621 2.7E-96 T 15-10-2018 AM378_00680 0d3928c127226634663627a9aaea23ea 631 Pfam PF03717 Penicillin-binding Protein dimerisation domain 65 240 2.0E-46 T 15-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 AM378_00680 0d3928c127226634663627a9aaea23ea 631 SUPERFAMILY SSF56519 57 254 7.72E-52 T 15-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 AM378_00680 0d3928c127226634663627a9aaea23ea 631 Gene3D G3DSA:3.30.1390.30 86 161 4.8E-51 T 15-10-2018 AM378_00680 0d3928c127226634663627a9aaea23ea 631 Gene3D G3DSA:3.90.1310.10 65 248 4.8E-51 T 15-10-2018 AM378_00680 0d3928c127226634663627a9aaea23ea 631 TIGRFAM TIGR03423 pbp2_mrdA: penicillin-binding protein 2 20 610 1.3E-237 T 15-10-2018 IPR017790 Penicillin-binding protein 2 GO:0008658|GO:0009002|GO:0009252|GO:0016020 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AM378_00680 0d3928c127226634663627a9aaea23ea 631 SUPERFAMILY SSF56601 255 610 5.47E-94 T 15-10-2018 IPR012338 Beta-lactamase/transpeptidase-like AM378_00680 0d3928c127226634663627a9aaea23ea 631 Pfam PF00905 Penicillin binding protein transpeptidase domain 273 607 4.8E-87 T 15-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 AM378_00680 0d3928c127226634663627a9aaea23ea 631 Hamap MF_02081 Peptidoglycan D,D-transpeptidase MrdA [mrdA]. 4 614 52.688 T 15-10-2018 IPR017790 Penicillin-binding protein 2 GO:0008658|GO:0009002|GO:0009252|GO:0016020 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AM378_21575 b7c52393982442619177ea0adf626734 174 Gene3D G3DSA:3.40.50.360 1 171 1.3E-50 T 15-10-2018 IPR029039 Flavoprotein-like superfamily AM378_21575 b7c52393982442619177ea0adf626734 174 SUPERFAMILY SSF52218 1 172 6.05E-46 T 15-10-2018 IPR029039 Flavoprotein-like superfamily AM378_21575 b7c52393982442619177ea0adf626734 174 Pfam PF02525 Flavodoxin-like fold 3 165 1.2E-41 T 15-10-2018 IPR003680 Flavodoxin-like fold AM378_23425 990ca7a97519e2509c8b201e9a4f93b5 267 SUPERFAMILY SSF51430 2 257 1.11E-80 T 15-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily AM378_23425 990ca7a97519e2509c8b201e9a4f93b5 267 ProSitePatterns PS00798 Aldo/keto reductase family signature 1. 29 46 - T 15-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 AM378_23425 990ca7a97519e2509c8b201e9a4f93b5 267 ProSitePatterns PS00062 Aldo/keto reductase family signature 2. 114 131 - T 15-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 AM378_23425 990ca7a97519e2509c8b201e9a4f93b5 267 PRINTS PR00069 Aldo-keto reductase signature 81 99 3.2E-44 T 15-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AM378_23425 990ca7a97519e2509c8b201e9a4f93b5 267 PRINTS PR00069 Aldo-keto reductase signature 25 49 3.2E-44 T 15-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AM378_23425 990ca7a97519e2509c8b201e9a4f93b5 267 PRINTS PR00069 Aldo-keto reductase signature 149 178 3.2E-44 T 15-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AM378_23425 990ca7a97519e2509c8b201e9a4f93b5 267 PRINTS PR00069 Aldo-keto reductase signature 114 131 3.2E-44 T 15-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AM378_23425 990ca7a97519e2509c8b201e9a4f93b5 267 PRINTS PR00069 Aldo-keto reductase signature 186 210 3.2E-44 T 15-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AM378_23425 990ca7a97519e2509c8b201e9a4f93b5 267 PIRSF PIRSF000097 102 265 7.4E-33 T 15-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AM378_23425 990ca7a97519e2509c8b201e9a4f93b5 267 PIRSF PIRSF000097 1 113 1.1E-32 T 15-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AM378_23425 990ca7a97519e2509c8b201e9a4f93b5 267 Pfam PF00248 Aldo/keto reductase family 9 250 9.0E-51 T 15-10-2018 IPR023210 NADP-dependent oxidoreductase domain AM378_23425 990ca7a97519e2509c8b201e9a4f93b5 267 Gene3D G3DSA:3.20.20.100 1 267 9.7E-91 T 15-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily AM378_02855 a7fffd7e890aee189ab58958f3f7fb02 324 SUPERFAMILY SSF53335 19 174 3.07E-29 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM378_02855 a7fffd7e890aee189ab58958f3f7fb02 324 Pfam PF08241 Methyltransferase domain 34 128 2.4E-17 T 15-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 AM378_02855 a7fffd7e890aee189ab58958f3f7fb02 324 Gene3D G3DSA:3.40.50.150 18 201 1.5E-28 T 15-10-2018 AM378_16375 3df29050ebec4927656916eed45cd6c8 326 Gene3D G3DSA:3.40.50.720 1 134 9.0E-35 T 15-10-2018 AM378_16375 3df29050ebec4927656916eed45cd6c8 326 SUPERFAMILY SSF51735 2 152 5.75E-43 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily AM378_16375 3df29050ebec4927656916eed45cd6c8 326 SUPERFAMILY SSF55347 126 291 2.09E-24 T 15-10-2018 AM378_16375 3df29050ebec4927656916eed45cd6c8 326 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 2 118 3.6E-26 T 15-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 AM378_16375 3df29050ebec4927656916eed45cd6c8 326 Gene3D G3DSA:3.30.360.10 135 324 1.0E-54 T 15-10-2018 AM378_16730 4359c4ae5b6ce5de2a84d1fa20c8e4cf 136 SUPERFAMILY SSF54534 49 126 3.53E-18 T 15-10-2018 AM378_16730 4359c4ae5b6ce5de2a84d1fa20c8e4cf 136 Gene3D G3DSA:1.10.286.20 1 44 6.2E-23 T 15-10-2018 AM378_16730 4359c4ae5b6ce5de2a84d1fa20c8e4cf 136 Gene3D G3DSA:3.10.50.30 45 136 2.6E-31 T 15-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 AM378_16730 4359c4ae5b6ce5de2a84d1fa20c8e4cf 136 Hamap MF_00954 Regulator of nucleoside diphosphate kinase [rnk]. 1 136 43.418 T 15-10-2018 IPR028625 Regulator of nucleoside diphosphate kinase GO:0070063 AM378_16730 4359c4ae5b6ce5de2a84d1fa20c8e4cf 136 Pfam PF14760 Rnk N-terminus 4 43 9.8E-13 T 15-10-2018 IPR029462 Regulator of nucleoside diphosphate kinase, N-terminal domain AM378_16730 4359c4ae5b6ce5de2a84d1fa20c8e4cf 136 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 50 124 8.1E-18 T 15-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 AM378_16730 4359c4ae5b6ce5de2a84d1fa20c8e4cf 136 PIRSF PIRSF006092 6 128 3.9E-25 T 15-10-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 AM378_07740 6ca68bff924af221309a606f9ca035e5 88 Pfam PF09584 Phage shock protein PspD (Phageshock_PspD) 19 78 9.7E-28 T 15-10-2018 IPR014321 Phage shock protein, PspD AM378_17665 643dfa663fa3103c18013935d27d6678 260 SUPERFAMILY SSF54506 1 259 9.82E-67 T 15-10-2018 AM378_17665 643dfa663fa3103c18013935d27d6678 260 Pfam PF02567 Phenazine biosynthesis-like protein 9 250 1.1E-44 T 15-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 AM378_17665 643dfa663fa3103c18013935d27d6678 260 TIGRFAM TIGR00654 PhzF_family: phenazine biosynthesis protein, PhzF family 2 228 1.1E-25 T 15-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 AM378_17665 643dfa663fa3103c18013935d27d6678 260 PIRSF PIRSF016184 1 260 2.1E-46 T 15-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 AM378_17665 643dfa663fa3103c18013935d27d6678 260 Gene3D G3DSA:3.10.310.10 5 252 1.9E-81 T 15-10-2018 AM378_17665 643dfa663fa3103c18013935d27d6678 260 Gene3D G3DSA:3.10.310.10 120 248 1.9E-81 T 15-10-2018 AM378_12750 93facebddd4a3e3509aa9588b3cb9347 664 ProSitePatterns PS00801 Transketolase signature 1. 12 32 - T 15-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 AM378_12750 93facebddd4a3e3509aa9588b3cb9347 664 SMART SM00861 355 526 1.1E-67 T 15-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain AM378_12750 93facebddd4a3e3509aa9588b3cb9347 664 Gene3D G3DSA:3.40.50.970 327 537 5.3E-85 T 15-10-2018 AM378_12750 93facebddd4a3e3509aa9588b3cb9347 664 SUPERFAMILY SSF52518 5 331 1.37E-120 T 15-10-2018 IPR029061 Thiamin diphosphate-binding fold AM378_12750 93facebddd4a3e3509aa9588b3cb9347 664 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 4 334 2.3E-170 T 15-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 AM378_12750 93facebddd4a3e3509aa9588b3cb9347 664 Gene3D G3DSA:3.40.50.920 538 664 4.2E-44 T 15-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 AM378_12750 93facebddd4a3e3509aa9588b3cb9347 664 Gene3D G3DSA:3.40.50.970 1 326 8.3E-136 T 15-10-2018 AM378_12750 93facebddd4a3e3509aa9588b3cb9347 664 ProSitePatterns PS00802 Transketolase signature 2. 467 483 - T 15-10-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 AM378_12750 93facebddd4a3e3509aa9588b3cb9347 664 Pfam PF02780 Transketolase, C-terminal domain 540 655 4.2E-20 T 15-10-2018 IPR033248 Transketolase, C-terminal domain AM378_12750 93facebddd4a3e3509aa9588b3cb9347 664 Pfam PF02779 Transketolase, pyrimidine binding domain 355 524 2.4E-44 T 15-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain AM378_12750 93facebddd4a3e3509aa9588b3cb9347 664 SUPERFAMILY SSF52922 533 664 9.95E-44 T 15-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 AM378_12750 93facebddd4a3e3509aa9588b3cb9347 664 TIGRFAM TIGR00232 tktlase_bact: transketolase 5 663 0.0 T 15-10-2018 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 AM378_12750 93facebddd4a3e3509aa9588b3cb9347 664 SUPERFAMILY SSF52518 335 526 2.24E-67 T 15-10-2018 IPR029061 Thiamin diphosphate-binding fold AM378_02470 edc5a501ddc974ddf1148a37cb7396d3 475 Gene3D G3DSA:3.40.720.10 29 475 7.9E-150 T 15-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 AM378_02470 edc5a501ddc974ddf1148a37cb7396d3 475 SUPERFAMILY SSF53649 49 474 5.67E-134 T 15-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 AM378_02470 edc5a501ddc974ddf1148a37cb7396d3 475 ProSitePatterns PS00123 Alkaline phosphatase active site. 125 133 - T 15-10-2018 IPR018299 Alkaline phosphatase, active site GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 AM378_02470 edc5a501ddc974ddf1148a37cb7396d3 475 SMART SM00098 69 475 3.1E-200 T 15-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 AM378_02470 edc5a501ddc974ddf1148a37cb7396d3 475 PRINTS PR00113 Alkaline phosphatase signature 225 235 1.5E-48 T 15-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 AM378_02470 edc5a501ddc974ddf1148a37cb7396d3 475 PRINTS PR00113 Alkaline phosphatase signature 68 88 1.5E-48 T 15-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 AM378_02470 edc5a501ddc974ddf1148a37cb7396d3 475 PRINTS PR00113 Alkaline phosphatase signature 125 140 1.5E-48 T 15-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 AM378_02470 edc5a501ddc974ddf1148a37cb7396d3 475 PRINTS PR00113 Alkaline phosphatase signature 162 182 1.5E-48 T 15-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 AM378_02470 edc5a501ddc974ddf1148a37cb7396d3 475 PRINTS PR00113 Alkaline phosphatase signature 324 353 1.5E-48 T 15-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 AM378_02470 edc5a501ddc974ddf1148a37cb7396d3 475 Pfam PF00245 Alkaline phosphatase 69 434 2.6E-121 T 15-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 AM378_05240 c99115d2678cd5402848985b909a61b3 480 TIGRFAM TIGR01322 scrB_fam: sucrose-6-phosphate hydrolase 18 449 8.9E-142 T 15-10-2018 IPR006232 Sucrose-6-phosphate hydrolase GO:0004564|GO:0005737|GO:0005975 KEGG: 00052+3.2.1.26|KEGG: 00500+3.2.1.26 AM378_05240 c99115d2678cd5402848985b909a61b3 480 Gene3D G3DSA:2.115.10.20 1 344 3.0E-128 T 15-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily AM378_05240 c99115d2678cd5402848985b909a61b3 480 SMART SM00640 28 439 1.9E-147 T 15-10-2018 IPR001362 Glycoside hydrolase, family 32 GO:0004553|GO:0005975 AM378_05240 c99115d2678cd5402848985b909a61b3 480 Gene3D G3DSA:2.60.120.560 345 475 3.5E-26 T 15-10-2018 AM378_05240 c99115d2678cd5402848985b909a61b3 480 ProSitePatterns PS00609 Glycosyl hydrolases family 32 active site. 28 41 - T 15-10-2018 IPR018053 Glycoside hydrolase, family 32, active site GO:0004553|GO:0005975 KEGG: 00052+3.2.1.26|KEGG: 00500+3.2.1.26 AM378_05240 c99115d2678cd5402848985b909a61b3 480 Pfam PF08244 Glycosyl hydrolases family 32 C terminal 333 473 5.0E-23 T 15-10-2018 IPR013189 Glycosyl hydrolase family 32, C-terminal AM378_05240 c99115d2678cd5402848985b909a61b3 480 Pfam PF00251 Glycosyl hydrolases family 32 N-terminal domain 28 328 4.0E-101 T 15-10-2018 IPR013148 Glycosyl hydrolase family 32, N-terminal AM378_05240 c99115d2678cd5402848985b909a61b3 480 SUPERFAMILY SSF49899 330 479 2.93E-29 T 15-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily AM378_05240 c99115d2678cd5402848985b909a61b3 480 SUPERFAMILY SSF75005 21 324 1.88E-110 T 15-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily AM378_15830 326b23fcad68832d67bc389bf592de0c 344 SUPERFAMILY SSF53822 66 322 2.94E-49 T 15-10-2018 IPR028082 Periplasmic binding protein-like I AM378_15830 326b23fcad68832d67bc389bf592de0c 344 Gene3D G3DSA:1.10.260.40 7 68 8.6E-25 T 15-10-2018 AM378_15830 326b23fcad68832d67bc389bf592de0c 344 Gene3D G3DSA:3.40.50.2300 161 335 7.9E-32 T 15-10-2018 AM378_15830 326b23fcad68832d67bc389bf592de0c 344 TIGRFAM TIGR02417 fruct_sucro_rep: D-fructose-responsive transcription factor 8 333 4.9E-125 T 15-10-2018 IPR012781 D-fructose-responsive transcription factor GO:0003677|GO:0006355|GO:0009750 AM378_15830 326b23fcad68832d67bc389bf592de0c 344 SMART SM00354 6 79 1.3E-33 T 15-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM378_15830 326b23fcad68832d67bc389bf592de0c 344 Pfam PF00356 Bacterial regulatory proteins, lacI family 8 56 3.8E-17 T 15-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM378_15830 326b23fcad68832d67bc389bf592de0c 344 SUPERFAMILY SSF47413 7 64 4.97E-16 T 15-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AM378_15830 326b23fcad68832d67bc389bf592de0c 344 Pfam PF13377 Periplasmic binding protein-like domain 184 333 3.8E-12 T 15-10-2018 AM378_15830 326b23fcad68832d67bc389bf592de0c 344 Gene3D G3DSA:3.40.50.2300 69 156 2.3E-19 T 15-10-2018 AM378_15830 326b23fcad68832d67bc389bf592de0c 344 ProSitePatterns PS00356 LacI-type HTH domain signature. 9 27 - T 15-10-2018 AM378_20775 5a74099f81acc3705a1e11031e366585 652 Pfam PF13193 AMP-binding enzyme C-terminal domain 531 609 8.1E-26 T 15-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain AM378_20775 5a74099f81acc3705a1e11031e366585 652 Pfam PF00501 AMP-binding enzyme 83 522 1.9E-92 T 15-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 AM378_20775 5a74099f81acc3705a1e11031e366585 652 Gene3D G3DSA:3.40.50.12780 50 515 2.0E-105 T 15-10-2018 AM378_20775 5a74099f81acc3705a1e11031e366585 652 Hamap MF_01123 Acetyl-coenzyme A synthetase [acs]. 2 645 53.172 T 15-10-2018 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857|Reactome: R-HSA-71384 AM378_20775 5a74099f81acc3705a1e11031e366585 652 SUPERFAMILY SSF56801 12 643 8.5E-188 T 15-10-2018 AM378_20775 5a74099f81acc3705a1e11031e366585 652 Gene3D G3DSA:3.30.300.30 518 652 2.3E-34 T 15-10-2018 AM378_20775 5a74099f81acc3705a1e11031e366585 652 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 24 81 4.9E-21 T 15-10-2018 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857 AM378_20775 5a74099f81acc3705a1e11031e366585 652 ProSitePatterns PS00455 Putative AMP-binding domain signature. 261 272 - T 15-10-2018 IPR020845 AMP-binding, conserved site AM378_20775 5a74099f81acc3705a1e11031e366585 652 TIGRFAM TIGR02188 Ac_CoA_lig_AcsA: acetate--CoA ligase 20 643 0.0 T 15-10-2018 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857|Reactome: R-HSA-71384 AM378_18720 4e157925b32bbe6610fb7aebe9aaec79 176 SUPERFAMILY SSF56235 2 172 2.04E-58 T 15-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AM378_18720 4e157925b32bbe6610fb7aebe9aaec79 176 TIGRFAM TIGR03692 ATP_dep_HslV: ATP-dependent protease HslVU, peptidase subunit 2 172 8.2E-87 T 15-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 AM378_18720 4e157925b32bbe6610fb7aebe9aaec79 176 Pfam PF00227 Proteasome subunit 2 167 8.4E-22 T 15-10-2018 IPR001353 Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 Reactome: R-HSA-1169091|Reactome: R-HSA-1234176|Reactome: R-HSA-1236974|Reactome: R-HSA-1236978|Reactome: R-HSA-174084|Reactome: R-HSA-174113|Reactome: R-HSA-174154|Reactome: R-HSA-174178|Reactome: R-HSA-174184|Reactome: R-HSA-180534|Reactome: R-HSA-180585|Reactome: R-HSA-187577|Reactome: R-HSA-195253|Reactome: R-HSA-202424|Reactome: R-HSA-211733|Reactome: R-HSA-2467813|Reactome: R-HSA-2871837|Reactome: R-HSA-349425|Reactome: R-HSA-350562|Reactome: R-HSA-382556|Reactome: R-HSA-450408|Reactome: R-HSA-4608870|Reactome: R-HSA-4641257|Reactome: R-HSA-4641258|Reactome: R-HSA-5358346|Reactome: R-HSA-5362768|Reactome: R-HSA-5607761|Reactome: R-HSA-5607764|Reactome: R-HSA-5610780|Reactome: R-HSA-5610783|Reactome: R-HSA-5610785|Reactome: R-HSA-5632684|Reactome: R-HSA-5658442|Reactome: R-HSA-5668541|Reactome: R-HSA-5676590|Reactome: R-HSA-5678895|Reactome: R-HSA-5687128|Reactome: R-HSA-5689603|Reactome: R-HSA-5689880|Reactome: R-HSA-68827|Reactome: R-HSA-68949|Reactome: R-HSA-69017|Reactome: R-HSA-69229|Reactome: R-HSA-69481|Reactome: R-HSA-69601|Reactome: R-HSA-8852276|Reactome: R-HSA-8854050|Reactome: R-HSA-8939236|Reactome: R-HSA-8939902|Reactome: R-HSA-8941858|Reactome: R-HSA-8948751|Reactome: R-HSA-8951664|Reactome: R-HSA-9010553|Reactome: R-HSA-9020702|Reactome: R-HSA-9604323|Reactome: R-HSA-983168 AM378_18720 4e157925b32bbe6610fb7aebe9aaec79 176 Gene3D G3DSA:3.60.20.10 1 173 3.0E-68 T 15-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AM378_18720 4e157925b32bbe6610fb7aebe9aaec79 176 PIRSF PIRSF039093 1 175 2.9E-89 T 15-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 AM378_18720 4e157925b32bbe6610fb7aebe9aaec79 176 Hamap MF_00248 ATP-dependent protease subunit HslV [hslV]. 1 172 41.922 T 15-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 AM378_10835 e6a4ca4003e65d94ba17adb2577d967c 102 Pfam PF06857 Malonate decarboxylase delta subunit (MdcD) 5 86 4.8E-29 T 15-10-2018 IPR023439 Malonate decarboxylase/citrate lyase acyl carrier protein AM378_10835 e6a4ca4003e65d94ba17adb2577d967c 102 ProDom PD015389 LYASE CITRATE ACYL CARRIER GAMMA CHAIN CITD PRECURSOR SIGNAL DIRECT 1 80 3.0E-24 T 15-10-2018 IPR006495 Citrate lyase acyl carrier protein CitD GO:0005737 AM378_10835 e6a4ca4003e65d94ba17adb2577d967c 102 Hamap MF_00805 Citrate lyase acyl carrier protein [citD]. 1 97 25.867 T 15-10-2018 IPR006495 Citrate lyase acyl carrier protein CitD GO:0005737 AM378_10835 e6a4ca4003e65d94ba17adb2577d967c 102 TIGRFAM TIGR01608 citD: citrate lyase acyl carrier protein 1 94 2.5E-30 T 15-10-2018 IPR006495 Citrate lyase acyl carrier protein CitD GO:0005737 AM378_10835 e6a4ca4003e65d94ba17adb2577d967c 102 PIRSF PIRSF002736 1 97 3.4E-37 T 15-10-2018 IPR006495 Citrate lyase acyl carrier protein CitD GO:0005737 AM378_15025 90e9263879f1121f66d6d011fdb3aba2 365 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 263 353 5.7E-17 T 15-10-2018 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 AM378_15025 90e9263879f1121f66d6d011fdb3aba2 365 Pfam PF01571 Aminomethyltransferase folate-binding domain 7 254 8.5E-82 T 15-10-2018 IPR006222 Aminomethyltransferase, folate-binding domain AM378_15025 90e9263879f1121f66d6d011fdb3aba2 365 SUPERFAMILY SSF103025 3 277 1.07E-91 T 15-10-2018 AM378_15025 90e9263879f1121f66d6d011fdb3aba2 365 Hamap MF_00259 Aminomethyltransferase [gcvT]. 1 359 43.824 T 15-10-2018 IPR022903 Glycine cleavage system T protein, bacteria GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 AM378_15025 90e9263879f1121f66d6d011fdb3aba2 365 PIRSF PIRSF006487 1 363 5.6E-79 T 15-10-2018 IPR028896 Aminomethyltransferase-like KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 AM378_15025 90e9263879f1121f66d6d011fdb3aba2 365 SUPERFAMILY SSF101790 270 360 8.5E-25 T 15-10-2018 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal AM378_15025 90e9263879f1121f66d6d011fdb3aba2 365 Gene3D G3DSA:4.10.1250.10 232 276 1.7E-26 T 15-10-2018 AM378_15025 90e9263879f1121f66d6d011fdb3aba2 365 Gene3D G3DSA:3.30.1360.120 6 231 6.8E-88 T 15-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 AM378_15025 90e9263879f1121f66d6d011fdb3aba2 365 Gene3D G3DSA:2.40.30.110 277 365 6.4E-34 T 15-10-2018 AM378_15025 90e9263879f1121f66d6d011fdb3aba2 365 Gene3D G3DSA:3.30.70.1400 51 138 6.8E-88 T 15-10-2018 AM378_15025 90e9263879f1121f66d6d011fdb3aba2 365 TIGRFAM TIGR00528 gcvT: glycine cleavage system T protein 2 358 1.9E-155 T 15-10-2018 IPR006223 Glycine cleavage system T protein GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 AM378_23555 7838d40df88a8a5ce2dc166aaa663231 449 TIGRFAM TIGR01936 nqrA: NADH:ubiquinone oxidoreductase, Na(+)-translocating, A subunit 2 449 2.9E-184 T 15-10-2018 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A GO:0006814|GO:0016655|GO:0055114 AM378_23555 7838d40df88a8a5ce2dc166aaa663231 449 Hamap MF_00425 Na(+)-translocating NADH-quinone reductase subunit A [nqrA]. 1 449 46.711 T 15-10-2018 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A GO:0006814|GO:0016655|GO:0055114 AM378_23555 7838d40df88a8a5ce2dc166aaa663231 449 Pfam PF11973 NQRA C-terminal domain 264 312 3.8E-22 T 15-10-2018 IPR022615 Na(+)-translocating NADH-quinone reductase subunit A, C-terminal domain GO:0016655|GO:0055114 AM378_23555 7838d40df88a8a5ce2dc166aaa663231 449 Pfam PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) 1 259 1.2E-113 T 15-10-2018 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A GO:0006814|GO:0016655|GO:0055114 AM378_07855 4a3da61afdcba4d61ad18ee687e6a8b2 387 SUPERFAMILY SSF55031 182 294 1.7E-29 T 15-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain AM378_07855 4a3da61afdcba4d61ad18ee687e6a8b2 387 Pfam PF01546 Peptidase family M20/M25/M40 72 383 3.3E-35 T 15-10-2018 IPR002933 Peptidase M20 GO:0016787 AM378_07855 4a3da61afdcba4d61ad18ee687e6a8b2 387 Gene3D G3DSA:3.40.630.10 14 371 4.2E-131 T 15-10-2018 AM378_07855 4a3da61afdcba4d61ad18ee687e6a8b2 387 Gene3D G3DSA:3.30.70.360 180 294 4.2E-131 T 15-10-2018 AM378_07855 4a3da61afdcba4d61ad18ee687e6a8b2 387 PIRSF PIRSF005962 1 387 2.6E-125 T 15-10-2018 IPR017439 Amidohydrolase GO:0016787 AM378_07855 4a3da61afdcba4d61ad18ee687e6a8b2 387 SUPERFAMILY SSF53187 2 386 2.31E-85 T 15-10-2018 AM378_07855 4a3da61afdcba4d61ad18ee687e6a8b2 387 Pfam PF07687 Peptidase dimerisation domain 184 280 3.1E-13 T 15-10-2018 IPR011650 Peptidase M20, dimerisation domain AM378_07855 4a3da61afdcba4d61ad18ee687e6a8b2 387 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 13 373 3.5E-105 T 15-10-2018 IPR017439 Amidohydrolase GO:0016787 AM378_00770 17c8c97cc72ca842e52006e6611652a4 351 SUPERFAMILY SSF52540 117 293 1.24E-40 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_00770 17c8c97cc72ca842e52006e6611652a4 351 Gene3D G3DSA:3.40.50.300 115 321 2.1E-74 T 15-10-2018 AM378_00770 17c8c97cc72ca842e52006e6611652a4 351 Pfam PF02562 PhoH-like protein 118 321 1.1E-94 T 15-10-2018 IPR003714 PhoH-like protein GO:0005524 AM378_06020 8139a4b3e9ebf6970b4f4366eceab5a1 809 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 139 283 1.4E-46 T 15-10-2018 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM378_06020 8139a4b3e9ebf6970b4f4366eceab5a1 809 TIGRFAM TIGR01945 rnfC: electron transport complex, RnfABCDGE type, C subunit 13 445 9.7E-184 T 15-10-2018 IPR010208 Ion-translocating oxidoreductase complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 AM378_06020 8139a4b3e9ebf6970b4f4366eceab5a1 809 Pfam PF13375 RnfC Barrel sandwich hybrid domain 14 115 3.4E-32 T 15-10-2018 IPR026902 RnfC Barrel sandwich hybrid domain AM378_06020 8139a4b3e9ebf6970b4f4366eceab5a1 809 Pfam PF13237 4Fe-4S dicluster domain 373 427 4.6E-9 T 15-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AM378_06020 8139a4b3e9ebf6970b4f4366eceab5a1 809 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 377 388 - T 15-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AM378_06020 8139a4b3e9ebf6970b4f4366eceab5a1 809 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 416 427 - T 15-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AM378_06020 8139a4b3e9ebf6970b4f4366eceab5a1 809 SUPERFAMILY SSF142019 94 303 4.97E-59 T 15-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM378_06020 8139a4b3e9ebf6970b4f4366eceab5a1 809 Gene3D G3DSA:3.30.70.20 372 447 8.3E-11 T 15-10-2018 AM378_06020 8139a4b3e9ebf6970b4f4366eceab5a1 809 Hamap MF_00461 Ion-translocating oxidoreductase complex subunit C [rsxC]. 1 737 260.364 T 15-10-2018 IPR010208 Ion-translocating oxidoreductase complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 AM378_06020 8139a4b3e9ebf6970b4f4366eceab5a1 809 Pfam PF10531 SLBB domain 296 344 1.0E-10 T 15-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM378_06020 8139a4b3e9ebf6970b4f4366eceab5a1 809 SUPERFAMILY SSF46548 336 443 1.74E-20 T 15-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 AM378_06020 8139a4b3e9ebf6970b4f4366eceab5a1 809 Gene3D G3DSA:3.40.50.11540 144 282 5.9E-11 T 15-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM378_10210 e7ce81fbfafb0dd1ea349fa4df2a1215 461 Gene3D G3DSA:3.40.50.10540 198 457 1.5E-53 T 15-10-2018 IPR023606 CoA-transferase family III domain superfamily AM378_10210 e7ce81fbfafb0dd1ea349fa4df2a1215 461 Pfam PF02515 CoA-transferase family III 203 399 6.6E-44 T 15-10-2018 IPR003673 CoA-transferase family III GO:0003824 AM378_10210 e7ce81fbfafb0dd1ea349fa4df2a1215 461 SUPERFAMILY SSF89796 201 399 4.97E-53 T 15-10-2018 IPR023606 CoA-transferase family III domain superfamily AM378_10210 e7ce81fbfafb0dd1ea349fa4df2a1215 461 SUPERFAMILY SSF89796 30 196 1.96E-21 T 15-10-2018 IPR023606 CoA-transferase family III domain superfamily AM378_16940 2db9f343671cbb5edac31896af9cc5c7 301 Gene3D G3DSA:2.60.120.330 47 229 5.9E-45 T 15-10-2018 IPR027443 Isopenicillin N synthase-like AM378_16940 2db9f343671cbb5edac31896af9cc5c7 301 SUPERFAMILY SSF51197 97 239 3.3E-20 T 15-10-2018 AM378_16940 2db9f343671cbb5edac31896af9cc5c7 301 Pfam PF05118 Aspartyl/Asparaginyl beta-hydroxylase 71 222 1.7E-49 T 15-10-2018 IPR007803 Aspartyl/asparaginy/proline hydroxylase GO:0018193 AM378_12010 76549db440af6f34cb8750fd8f9b0e35 326 SUPERFAMILY SSF53850 63 242 1.24E-9 T 15-10-2018 AM378_12010 76549db440af6f34cb8750fd8f9b0e35 326 PIRSF PIRSF017082 1 326 2.8E-80 T 15-10-2018 IPR005064 Bordetella uptake gene GO:0030288 AM378_12010 76549db440af6f34cb8750fd8f9b0e35 326 Gene3D G3DSA:3.40.190.150 31 317 3.2E-57 T 15-10-2018 AM378_12010 76549db440af6f34cb8750fd8f9b0e35 326 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 109 315 1.1E-19 T 15-10-2018 IPR005064 Bordetella uptake gene GO:0030288 AM378_12010 76549db440af6f34cb8750fd8f9b0e35 326 Gene3D G3DSA:3.40.190.10 125 252 3.2E-57 T 15-10-2018 AM378_23225 56e9ab0b6df46bc627c9eda663e9488f 459 Gene3D G3DSA:1.20.1250.20 202 385 3.9E-21 T 15-10-2018 AM378_23225 56e9ab0b6df46bc627c9eda663e9488f 459 Gene3D G3DSA:1.20.1250.20 4 187 2.2E-12 T 15-10-2018 AM378_23225 56e9ab0b6df46bc627c9eda663e9488f 459 SUPERFAMILY SSF103473 8 374 1.7E-41 T 15-10-2018 IPR036259 MFS transporter superfamily AM378_23225 56e9ab0b6df46bc627c9eda663e9488f 459 Pfam PF07690 Major Facilitator Superfamily 13 298 2.1E-18 T 15-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM378_07765 724f26087793d07b7a1640dbf4dfe548 395 SUPERFAMILY SSF52540 2 312 1.68E-42 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_07765 724f26087793d07b7a1640dbf4dfe548 395 SMART SM00833 255 372 3.8E-48 T 15-10-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal AM378_07765 724f26087793d07b7a1640dbf4dfe548 395 Gene3D G3DSA:3.40.50.300 1 228 2.2E-70 T 15-10-2018 AM378_07765 724f26087793d07b7a1640dbf4dfe548 395 Pfam PF07683 Cobalamin synthesis protein cobW C-terminal domain 255 372 8.4E-26 T 15-10-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal AM378_07765 724f26087793d07b7a1640dbf4dfe548 395 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 5 209 6.2E-55 T 15-10-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain AM378_23530 e76a5d2e545ac5cfbf6573ec8084250f 50 PRINTS PR00281 Hok/Gef cell toxic protein family signature 25 47 2.1E-13 T 15-10-2018 IPR000021 Hok/gef cell toxic protein GO:0016020 AM378_23530 e76a5d2e545ac5cfbf6573ec8084250f 50 PRINTS PR00281 Hok/Gef cell toxic protein family signature 5 23 2.1E-13 T 15-10-2018 IPR000021 Hok/gef cell toxic protein GO:0016020 AM378_23530 e76a5d2e545ac5cfbf6573ec8084250f 50 ProSitePatterns PS00556 Hok/gef family cell toxic proteins signature. 10 29 - T 15-10-2018 IPR018084 Hok/gef cell toxic protein, conserved site GO:0016020 AM378_23530 e76a5d2e545ac5cfbf6573ec8084250f 50 ProDom PD005979 PLASMID MEMBRANE TRANSMEMBRANE POST-SEGREGATION KILLING INHERITANCE ALTERING PERMEABILITY STABLE MAINTENANCE 1 48 1.0E-9 T 15-10-2018 IPR000021 Hok/gef cell toxic protein GO:0016020 AM378_23530 e76a5d2e545ac5cfbf6573ec8084250f 50 Pfam PF01848 Hok/gef family 6 46 8.4E-19 T 15-10-2018 IPR000021 Hok/gef cell toxic protein GO:0016020 AM378_16675 4cfa8f6d8b7555c0f37e0ac67077c7a2 90 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 4 84 2.6E-22 T 15-10-2018 IPR000032 Phosphocarrier protein HPr-like AM378_16675 4cfa8f6d8b7555c0f37e0ac67077c7a2 90 PRINTS PR00107 Phosphocarrier protein signature 55 72 6.3E-10 T 15-10-2018 IPR000032 Phosphocarrier protein HPr-like AM378_16675 4cfa8f6d8b7555c0f37e0ac67077c7a2 90 PRINTS PR00107 Phosphocarrier protein signature 40 55 6.3E-10 T 15-10-2018 IPR000032 Phosphocarrier protein HPr-like AM378_16675 4cfa8f6d8b7555c0f37e0ac67077c7a2 90 PRINTS PR00107 Phosphocarrier protein signature 14 30 6.3E-10 T 15-10-2018 IPR000032 Phosphocarrier protein HPr-like AM378_16675 4cfa8f6d8b7555c0f37e0ac67077c7a2 90 Pfam PF00381 PTS HPr component phosphorylation site 4 84 1.7E-23 T 15-10-2018 IPR000032 Phosphocarrier protein HPr-like AM378_16675 4cfa8f6d8b7555c0f37e0ac67077c7a2 90 SUPERFAMILY SSF55594 4 90 2.09E-24 T 15-10-2018 IPR035895 HPr-like superfamily AM378_16675 4cfa8f6d8b7555c0f37e0ac67077c7a2 90 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 14 21 - T 15-10-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site AM378_16675 4cfa8f6d8b7555c0f37e0ac67077c7a2 90 Gene3D G3DSA:3.30.1340.10 1 85 1.8E-31 T 15-10-2018 IPR035895 HPr-like superfamily AM378_16010 11da57613362ecad9088539552fcff83 510 SUPERFAMILY SSF53649 39 504 2.45E-149 T 15-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 AM378_16010 11da57613362ecad9088539552fcff83 510 Pfam PF00245 Alkaline phosphatase 60 501 1.6E-123 T 15-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 AM378_16010 11da57613362ecad9088539552fcff83 510 Gene3D G3DSA:3.40.720.10 30 509 1.3E-179 T 15-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 AM378_16010 11da57613362ecad9088539552fcff83 510 SMART SM00098 61 504 1.8E-154 T 15-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 AM378_16010 11da57613362ecad9088539552fcff83 510 PRINTS PR00113 Alkaline phosphatase signature 316 345 3.5E-43 T 15-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 AM378_16010 11da57613362ecad9088539552fcff83 510 PRINTS PR00113 Alkaline phosphatase signature 163 183 3.5E-43 T 15-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 AM378_16010 11da57613362ecad9088539552fcff83 510 PRINTS PR00113 Alkaline phosphatase signature 225 235 3.5E-43 T 15-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 AM378_16010 11da57613362ecad9088539552fcff83 510 PRINTS PR00113 Alkaline phosphatase signature 116 131 3.5E-43 T 15-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 AM378_16010 11da57613362ecad9088539552fcff83 510 PRINTS PR00113 Alkaline phosphatase signature 60 80 3.5E-43 T 15-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 AM378_14665 4066416b9b65ca6e3dab9229085c0cc2 231 SMART SM00421 162 219 2.9E-9 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM378_14665 4066416b9b65ca6e3dab9229085c0cc2 231 SUPERFAMILY SSF46894 151 217 6.12E-13 T 15-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AM378_14665 4066416b9b65ca6e3dab9229085c0cc2 231 Gene3D G3DSA:3.40.50.12740 21 220 5.7E-25 T 15-10-2018 AM378_14665 4066416b9b65ca6e3dab9229085c0cc2 231 ProSitePatterns PS00622 LuxR-type HTH domain signature. 179 206 - T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM378_14665 4066416b9b65ca6e3dab9229085c0cc2 231 SUPERFAMILY SSF52172 37 158 2.13E-10 T 15-10-2018 IPR011006 CheY-like superfamily AM378_14665 4066416b9b65ca6e3dab9229085c0cc2 231 Pfam PF00196 Bacterial regulatory proteins, luxR family 164 216 1.3E-11 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM378_14665 4066416b9b65ca6e3dab9229085c0cc2 231 Pfam PF00072 Response regulator receiver domain 38 135 1.8E-7 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM378_14665 4066416b9b65ca6e3dab9229085c0cc2 231 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 179 195 2.1E-5 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM378_14665 4066416b9b65ca6e3dab9229085c0cc2 231 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 195 207 2.1E-5 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM378_14665 4066416b9b65ca6e3dab9229085c0cc2 231 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 165 179 2.1E-5 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM378_11055 d13a9c2dc1aa9d50f32309a391a29f04 299 SUPERFAMILY SSF46785 4 115 1.23E-21 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM378_11055 d13a9c2dc1aa9d50f32309a391a29f04 299 SUPERFAMILY SSF53850 92 297 1.36E-42 T 15-10-2018 AM378_11055 d13a9c2dc1aa9d50f32309a391a29f04 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 66 9.0E-20 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_11055 d13a9c2dc1aa9d50f32309a391a29f04 299 Pfam PF03466 LysR substrate binding domain 90 294 6.1E-42 T 15-10-2018 IPR005119 LysR, substrate-binding AM378_11055 d13a9c2dc1aa9d50f32309a391a29f04 299 Gene3D G3DSA:1.10.10.10 5 95 4.2E-23 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_11055 d13a9c2dc1aa9d50f32309a391a29f04 299 Gene3D G3DSA:3.40.190.290 96 298 3.2E-48 T 15-10-2018 AM378_11055 d13a9c2dc1aa9d50f32309a391a29f04 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 9.9E-8 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_11055 d13a9c2dc1aa9d50f32309a391a29f04 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 9.9E-8 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_11055 d13a9c2dc1aa9d50f32309a391a29f04 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 9.9E-8 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_09180 c6e46b0c1c1648b16f2cecc96cbb3388 349 Hamap MF_02030 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase [wecA]. 4 347 25.615 T 15-10-2018 IPR012750 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase GO:0000287|GO:0009103|GO:0009276|GO:0016021|GO:0016780|GO:0030145 MetaCyc: PWY-7290|MetaCyc: PWY-7530|MetaCyc: PWY-7815|MetaCyc: PWY-7816|MetaCyc: PWY-7819|MetaCyc: PWY-7905 AM378_09180 c6e46b0c1c1648b16f2cecc96cbb3388 349 TIGRFAM TIGR02380 ECA_wecA: undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase 4 334 1.2E-125 T 15-10-2018 IPR012750 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase GO:0000287|GO:0009103|GO:0009276|GO:0016021|GO:0016780|GO:0030145 MetaCyc: PWY-7290|MetaCyc: PWY-7530|MetaCyc: PWY-7815|MetaCyc: PWY-7816|MetaCyc: PWY-7819|MetaCyc: PWY-7905 AM378_09180 c6e46b0c1c1648b16f2cecc96cbb3388 349 Pfam PF00953 Glycosyl transferase family 4 70 228 3.2E-28 T 15-10-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 AM378_10370 705427baed010f111cab2b8205b98321 435 SUPERFAMILY SSF56801 18 396 4.84E-64 T 15-10-2018 AM378_10370 705427baed010f111cab2b8205b98321 435 Pfam PF14535 AMP-binding enzyme C-terminal domain 337 433 4.0E-27 T 15-10-2018 IPR028154 AMP-dependent ligase, C-terminal AM378_10370 705427baed010f111cab2b8205b98321 435 TIGRFAM TIGR02155 PA_CoA_ligase: phenylacetate-CoA ligase 12 433 7.6E-221 T 15-10-2018 IPR011880 Phenylacetate-CoA ligase GO:0010124|GO:0047475 KEGG: 00360+6.2.1.30|MetaCyc: PWY-1341|MetaCyc: PWY-6318|MetaCyc: PWY-7716 AM378_10370 705427baed010f111cab2b8205b98321 435 Gene3D G3DSA:3.40.50.12780 1 330 5.4E-134 T 15-10-2018 AM378_10370 705427baed010f111cab2b8205b98321 435 Pfam PF00501 AMP-binding enzyme 79 291 8.9E-16 T 15-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 AM378_10370 705427baed010f111cab2b8205b98321 435 Gene3D G3DSA:3.30.300.30 331 434 4.5E-31 T 15-10-2018 AM378_10370 705427baed010f111cab2b8205b98321 435 PIRSF PIRSF006444 1 435 8.7E-204 T 15-10-2018 IPR011880 Phenylacetate-CoA ligase GO:0010124|GO:0047475 KEGG: 00360+6.2.1.30|MetaCyc: PWY-1341|MetaCyc: PWY-6318|MetaCyc: PWY-7716 AM378_11255 83b900dbf9643115eb3d80b6843b9f31 475 SUPERFAMILY SSF53098 8 473 8.28E-136 T 15-10-2018 IPR012337 Ribonuclease H-like superfamily AM378_11255 83b900dbf9643115eb3d80b6843b9f31 475 SMART SM00479 8 201 0.0063 T 15-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III AM378_11255 83b900dbf9643115eb3d80b6843b9f31 475 Gene3D G3DSA:3.30.420.10 2 199 5.5E-71 T 15-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AM378_11255 83b900dbf9643115eb3d80b6843b9f31 475 Pfam PF00929 Exonuclease 11 190 2.4E-27 T 15-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III AM378_11255 83b900dbf9643115eb3d80b6843b9f31 475 Gene3D G3DSA:2.30.30.450 212 352 7.9E-59 T 15-10-2018 IPR038649 Exonuclease I, SH3-like domain superfamily AM378_11255 83b900dbf9643115eb3d80b6843b9f31 475 Gene3D G3DSA:1.20.1280.70 358 419 9.8E-27 T 15-10-2018 AM378_11255 83b900dbf9643115eb3d80b6843b9f31 475 PIRSF PIRSF000977 1 475 2.6E-206 T 15-10-2018 IPR023607 Exodeoxyribonuclease I GO:0004529 AM378_11255 83b900dbf9643115eb3d80b6843b9f31 475 Pfam PF08411 Exonuclease C-terminal 210 471 7.7E-109 T 15-10-2018 IPR013620 Exodeoxyribonuclease I, C-terminal GO:0006281|GO:0008852 AM378_14530 1ef4caa8b923d9ac6e0e4b25850f4481 72 Pfam PF06004 Bacterial protein of unknown function (DUF903) 23 71 2.1E-24 T 15-10-2018 IPR010305 Protein of unknown function DUF903 AM378_14530 1ef4caa8b923d9ac6e0e4b25850f4481 72 Gene3D G3DSA:2.30.30.100 19 72 4.5E-27 T 15-10-2018 AM378_14530 1ef4caa8b923d9ac6e0e4b25850f4481 72 SUPERFAMILY SSF50182 21 71 1.58E-18 T 15-10-2018 IPR010920 LSM domain superfamily AM378_21155 3f61d7c470daabe5d3f7092291d494db 221 Pfam PF01814 Hemerythrin HHE cation binding domain 78 217 8.2E-28 T 15-10-2018 IPR012312 Haemerythrin-like Reactome: R-HSA-390471|Reactome: R-HSA-8951664|Reactome: R-HSA-917937|Reactome: R-HSA-983168 AM378_21155 3f61d7c470daabe5d3f7092291d494db 221 Hamap MF_01606 Iron-sulfur cluster repair protein YtfE [ytfE]. 1 221 49.402 T 15-10-2018 IPR023742 Iron-sulfur cluster repair protein YftE GO:0030091 AM378_21155 3f61d7c470daabe5d3f7092291d494db 221 TIGRFAM TIGR03652 FeS_repair_RIC: iron-sulfur cluster repair di-iron protein 8 217 9.2E-79 T 15-10-2018 IPR019903 Repair of iron centres family AM378_21155 3f61d7c470daabe5d3f7092291d494db 221 Gene3D G3DSA:1.20.120.520 71 220 1.2E-29 T 15-10-2018 AM378_21155 3f61d7c470daabe5d3f7092291d494db 221 Pfam PF04405 Domain of Unknown function (DUF542) 5 58 2.0E-20 T 15-10-2018 IPR019903 Repair of iron centres family AM378_11290 44e456fa8a5baefda0e5c34ac7d0f9dc 662 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 39 - T 15-10-2018 IPR010916 TonB box, conserved site AM378_11290 44e456fa8a5baefda0e5c34ac7d0f9dc 662 SUPERFAMILY SSF56935 32 662 1.8E-124 T 15-10-2018 AM378_11290 44e456fa8a5baefda0e5c34ac7d0f9dc 662 Pfam PF00593 TonB dependent receptor 287 661 4.3E-57 T 15-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel AM378_11290 44e456fa8a5baefda0e5c34ac7d0f9dc 662 Gene3D G3DSA:2.40.170.20 167 662 4.0E-140 T 15-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AM378_11290 44e456fa8a5baefda0e5c34ac7d0f9dc 662 Pfam PF07715 TonB-dependent Receptor Plug Domain 45 155 3.4E-28 T 15-10-2018 IPR012910 TonB-dependent receptor, plug domain AM378_11290 44e456fa8a5baefda0e5c34ac7d0f9dc 662 Gene3D G3DSA:2.170.130.10 27 160 6.7E-40 T 15-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily AM378_19980 709ed88caa3f74760648da17fb72e973 428 SMART SM00490 270 351 1.1E-30 T 15-10-2018 IPR001650 Helicase, C-terminal AM378_19980 709ed88caa3f74760648da17fb72e973 428 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 163 171 - T 15-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site AM378_19980 709ed88caa3f74760648da17fb72e973 428 Pfam PF00271 Helicase conserved C-terminal domain 243 351 1.4E-28 T 15-10-2018 IPR001650 Helicase, C-terminal AM378_19980 709ed88caa3f74760648da17fb72e973 428 Gene3D G3DSA:3.40.50.300 2 230 1.4E-69 T 15-10-2018 AM378_19980 709ed88caa3f74760648da17fb72e973 428 Gene3D G3DSA:3.40.50.300 231 392 1.6E-44 T 15-10-2018 AM378_19980 709ed88caa3f74760648da17fb72e973 428 Pfam PF00270 DEAD/DEAH box helicase 33 206 1.6E-44 T 15-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AM378_19980 709ed88caa3f74760648da17fb72e973 428 Hamap MF_00661 ATP-dependent RNA helicase RhlB [rhlB]. 8 389 50.57 T 15-10-2018 IPR023554 ATP-dependent RNA helicase RhlB type GO:0004004 AM378_19980 709ed88caa3f74760648da17fb72e973 428 SMART SM00487 28 234 8.1E-53 T 15-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AM378_19980 709ed88caa3f74760648da17fb72e973 428 SUPERFAMILY SSF52540 84 363 3.14E-68 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_11680 86ae5e0605dc743bdfbf53d54804486a 461 TIGRFAM TIGR01923 menE: O-succinylbenzoate-CoA ligase 30 450 1.9E-112 T 15-10-2018 IPR010192 2-succinylbenzoate--CoA ligase GO:0005524|GO:0008756|GO:0009234 KEGG: 00130+6.2.1.26|MetaCyc: PWY-5837 AM378_11680 86ae5e0605dc743bdfbf53d54804486a 461 Pfam PF00501 AMP-binding enzyme 10 360 1.1E-50 T 15-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 AM378_11680 86ae5e0605dc743bdfbf53d54804486a 461 SUPERFAMILY SSF56801 9 457 7.85E-94 T 15-10-2018 AM378_11680 86ae5e0605dc743bdfbf53d54804486a 461 ProSitePatterns PS00455 Putative AMP-binding domain signature. 143 154 - T 15-10-2018 IPR020845 AMP-binding, conserved site AM378_11680 86ae5e0605dc743bdfbf53d54804486a 461 Gene3D G3DSA:3.40.50.12780 6 360 3.6E-65 T 15-10-2018 AM378_11680 86ae5e0605dc743bdfbf53d54804486a 461 Gene3D G3DSA:3.30.300.30 361 460 3.0E-15 T 15-10-2018 AM378_08300 ba7eb826b81b64d054ad87e9e6c323fe 135 Gene3D G3DSA:1.10.287.1050 1 83 5.8E-37 T 15-10-2018 IPR027454 Histone-like protein H-NS, N-terminal GO:0046983 AM378_08300 ba7eb826b81b64d054ad87e9e6c323fe 135 Gene3D G3DSA:4.10.430.10 91 135 5.1E-25 T 15-10-2018 IPR037150 Histone-like protein H-NS, C-terminal domain superfamily GO:0003677 AM378_08300 ba7eb826b81b64d054ad87e9e6c323fe 135 SMART SM00528 87 135 5.0E-23 T 15-10-2018 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 AM378_08300 ba7eb826b81b64d054ad87e9e6c323fe 135 SUPERFAMILY SSF81273 93 135 1.14E-11 T 15-10-2018 AM378_08300 ba7eb826b81b64d054ad87e9e6c323fe 135 Pfam PF00816 H-NS histone family 32 127 9.6E-19 T 15-10-2018 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 AM378_08300 ba7eb826b81b64d054ad87e9e6c323fe 135 SUPERFAMILY SSF81273 2 58 4.32E-18 T 15-10-2018 AM378_08300 ba7eb826b81b64d054ad87e9e6c323fe 135 PIRSF PIRSF002096 1 135 3.1E-56 T 15-10-2018 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 AM378_18495 9059acc9d84bbd65f7706a8d9bbd9a39 491 Gene3D G3DSA:1.10.1040.10 209 491 4.8E-128 T 15-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AM378_18495 9059acc9d84bbd65f7706a8d9bbd9a39 491 Hamap MF_00435 Ketol-acid reductoisomerase (NADP(+)) [ilvC]. 22 485 38.9 T 15-10-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 AM378_18495 9059acc9d84bbd65f7706a8d9bbd9a39 491 SUPERFAMILY SSF51735 28 209 1.11E-57 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily AM378_18495 9059acc9d84bbd65f7706a8d9bbd9a39 491 Pfam PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain 35 204 1.8E-58 T 15-10-2018 IPR013116 Ketol-acid reductoisomerase, N-terminal KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 AM378_18495 9059acc9d84bbd65f7706a8d9bbd9a39 491 SUPERFAMILY SSF48179 348 484 2.21E-40 T 15-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 AM378_18495 9059acc9d84bbd65f7706a8d9bbd9a39 491 SUPERFAMILY SSF48179 210 370 7.82E-41 T 15-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 AM378_18495 9059acc9d84bbd65f7706a8d9bbd9a39 491 TIGRFAM TIGR00465 ilvC: ketol-acid reductoisomerase 35 367 1.4E-134 T 15-10-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 AM378_18495 9059acc9d84bbd65f7706a8d9bbd9a39 491 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 210 342 7.3E-27 T 15-10-2018 IPR000506 Ketol-acid reductoisomerase, C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 AM378_18495 9059acc9d84bbd65f7706a8d9bbd9a39 491 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 355 482 1.7E-22 T 15-10-2018 IPR000506 Ketol-acid reductoisomerase, C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 AM378_18495 9059acc9d84bbd65f7706a8d9bbd9a39 491 Gene3D G3DSA:3.40.50.720 1 208 9.3E-87 T 15-10-2018 AM378_22390 31c1674e1dcb7aea450379ba23b91e76 322 Gene3D G3DSA:3.40.50.720 19 318 3.3E-69 T 15-10-2018 AM378_22390 31c1674e1dcb7aea450379ba23b91e76 322 SUPERFAMILY SSF51735 27 280 4.51E-45 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily AM378_22390 31c1674e1dcb7aea450379ba23b91e76 322 Pfam PF00106 short chain dehydrogenase 30 227 6.4E-21 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_22390 31c1674e1dcb7aea450379ba23b91e76 322 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 204 221 8.4E-8 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_22390 31c1674e1dcb7aea450379ba23b91e76 322 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 102 113 8.4E-8 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_22390 31c1674e1dcb7aea450379ba23b91e76 322 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 30 47 8.4E-8 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_17760 545e5edc90dd8bb2a623e9afe96e3099 326 Gene3D G3DSA:3.40.50.2300 56 303 5.6E-66 T 15-10-2018 AM378_17760 545e5edc90dd8bb2a623e9afe96e3099 326 Gene3D G3DSA:3.40.50.2300 160 287 5.6E-66 T 15-10-2018 AM378_17760 545e5edc90dd8bb2a623e9afe96e3099 326 SMART SM00354 1 71 9.4E-30 T 15-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM378_17760 545e5edc90dd8bb2a623e9afe96e3099 326 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 7.2E-19 T 15-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM378_17760 545e5edc90dd8bb2a623e9afe96e3099 326 SUPERFAMILY SSF53822 61 322 2.55E-67 T 15-10-2018 IPR028082 Periplasmic binding protein-like I AM378_17760 545e5edc90dd8bb2a623e9afe96e3099 326 SUPERFAMILY SSF47413 1 59 4.46E-18 T 15-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AM378_17760 545e5edc90dd8bb2a623e9afe96e3099 326 Gene3D G3DSA:1.10.260.40 1 55 1.3E-23 T 15-10-2018 AM378_17760 545e5edc90dd8bb2a623e9afe96e3099 326 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 5.5E-6 T 15-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM378_17760 545e5edc90dd8bb2a623e9afe96e3099 326 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 5.5E-6 T 15-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM378_17760 545e5edc90dd8bb2a623e9afe96e3099 326 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 15-10-2018 AM378_17760 545e5edc90dd8bb2a623e9afe96e3099 326 Pfam PF13377 Periplasmic binding protein-like domain 168 321 3.9E-34 T 15-10-2018 AM378_13285 c7bbc0f386db97eb284409459ba7e2f1 360 SMART SM00354 4 54 0.0017 T 15-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM378_13285 c7bbc0f386db97eb284409459ba7e2f1 360 Gene3D G3DSA:3.40.50.2300 164 335 4.6E-46 T 15-10-2018 AM378_13285 c7bbc0f386db97eb284409459ba7e2f1 360 Pfam PF13377 Periplasmic binding protein-like domain 173 338 4.3E-28 T 15-10-2018 AM378_13285 c7bbc0f386db97eb284409459ba7e2f1 360 Gene3D G3DSA:3.40.50.2300 75 330 4.6E-46 T 15-10-2018 AM378_13285 c7bbc0f386db97eb284409459ba7e2f1 360 SUPERFAMILY SSF47413 4 58 5.96E-9 T 15-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AM378_13285 c7bbc0f386db97eb284409459ba7e2f1 360 SUPERFAMILY SSF53822 75 340 7.07E-42 T 15-10-2018 IPR028082 Periplasmic binding protein-like I AM378_13285 c7bbc0f386db97eb284409459ba7e2f1 360 Pfam PF00356 Bacterial regulatory proteins, lacI family 6 45 3.9E-8 T 15-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM378_13285 c7bbc0f386db97eb284409459ba7e2f1 360 Gene3D G3DSA:1.10.260.40 4 47 1.9E-10 T 15-10-2018 AM378_07800 88151fb1c00b46900bf0089d7afd8dad 270 Pfam PF00005 ABC transporter 30 177 5.2E-33 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM378_07800 88151fb1c00b46900bf0089d7afd8dad 270 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM378_07800 88151fb1c00b46900bf0089d7afd8dad 270 SMART SM00382 38 227 6.5E-13 T 15-10-2018 IPR003593 AAA+ ATPase domain AM378_07800 88151fb1c00b46900bf0089d7afd8dad 270 SUPERFAMILY SSF52540 4 248 1.17E-58 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_07800 88151fb1c00b46900bf0089d7afd8dad 270 Gene3D G3DSA:3.40.50.300 1 264 9.2E-75 T 15-10-2018 AM378_05665 1c1e539e1b08c363ff0f340ac3e52ae0 792 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 417 428 - T 15-10-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 AM378_05665 1c1e539e1b08c363ff0f340ac3e52ae0 792 PIRSF PIRSF000854 7 792 0.0 T 15-10-2018 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484|MetaCyc: PWY-6142 AM378_05665 1c1e539e1b08c363ff0f340ac3e52ae0 792 Gene3D G3DSA:3.30.470.20 199 360 7.8E-60 T 15-10-2018 AM378_05665 1c1e539e1b08c363ff0f340ac3e52ae0 792 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 697 715 - T 15-10-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 AM378_05665 1c1e539e1b08c363ff0f340ac3e52ae0 792 Pfam PF00391 PEP-utilising enzyme, mobile domain 387 458 7.3E-27 T 15-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 AM378_05665 1c1e539e1b08c363ff0f340ac3e52ae0 792 TIGRFAM TIGR01418 PEP_synth: phosphoenolpyruvate synthase 11 790 0.0 T 15-10-2018 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484|MetaCyc: PWY-6142 AM378_05665 1c1e539e1b08c363ff0f340ac3e52ae0 792 Gene3D G3DSA:3.20.20.60 481 791 2.4E-100 T 15-10-2018 AM378_05665 1c1e539e1b08c363ff0f340ac3e52ae0 792 SUPERFAMILY SSF52009 351 469 3.14E-35 T 15-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 AM378_05665 1c1e539e1b08c363ff0f340ac3e52ae0 792 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 23 348 8.3E-119 T 15-10-2018 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 AM378_05665 1c1e539e1b08c363ff0f340ac3e52ae0 792 SUPERFAMILY SSF56059 9 388 1.41E-107 T 15-10-2018 AM378_05665 1c1e539e1b08c363ff0f340ac3e52ae0 792 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 485 788 1.7E-59 T 15-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 AM378_05665 1c1e539e1b08c363ff0f340ac3e52ae0 792 Gene3D G3DSA:3.50.30.10 363 480 3.7E-41 T 15-10-2018 AM378_05665 1c1e539e1b08c363ff0f340ac3e52ae0 792 SUPERFAMILY SSF51621 470 788 9.95E-96 T 15-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 AM378_05665 1c1e539e1b08c363ff0f340ac3e52ae0 792 Gene3D G3DSA:3.30.1490.20 8 198 5.4E-71 T 15-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 AM378_06525 f04d92be2315152eca553727c0265394 538 Pfam PF08548 Peptidase M10 serralysin C terminal 307 534 1.5E-66 T 15-10-2018 IPR013858 Peptidase M10 serralysin, C-terminal GO:0005509|GO:0005615 AM378_06525 f04d92be2315152eca553727c0265394 538 Gene3D G3DSA:2.150.10.10 312 530 1.3E-164 T 15-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal AM378_06525 f04d92be2315152eca553727c0265394 538 SMART SM00235 93 291 5.0E-7 T 15-10-2018 IPR006026 Peptidase, metallopeptidase GO:0006508|GO:0008237|GO:0008270 AM378_06525 f04d92be2315152eca553727c0265394 538 Pfam PF00413 Matrixin 134 259 2.7E-10 T 15-10-2018 IPR001818 Peptidase M10, metallopeptidase GO:0004222|GO:0006508|GO:0008270|GO:0031012 AM378_06525 f04d92be2315152eca553727c0265394 538 Gene3D G3DSA:3.40.390.10 72 311 1.3E-164 T 15-10-2018 IPR024079 Metallopeptidase, catalytic domain superfamily GO:0008237 AM378_06525 f04d92be2315152eca553727c0265394 538 SUPERFAMILY SSF55486 70 305 1.0E-51 T 15-10-2018 AM378_06525 f04d92be2315152eca553727c0265394 538 SUPERFAMILY SSF51120 308 529 1.83E-34 T 15-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal AM378_23855 44df0c5887046782179dbf7b242056d6 213 Pfam PF01323 DSBA-like thioredoxin domain 46 200 2.5E-19 T 15-10-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590|Reactome: R-HSA-9033241 AM378_23855 44df0c5887046782179dbf7b242056d6 213 Gene3D G3DSA:3.40.30.10 30 213 4.0E-44 T 15-10-2018 AM378_23855 44df0c5887046782179dbf7b242056d6 213 SUPERFAMILY SSF52833 27 189 5.61E-34 T 15-10-2018 IPR036249 Thioredoxin-like superfamily AM378_23855 44df0c5887046782179dbf7b242056d6 213 ProSitePatterns PS00194 Thioredoxin family active site. 46 64 - T 15-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 AM378_23855 44df0c5887046782179dbf7b242056d6 213 PIRSF PIRSF001488 5 212 1.3E-57 T 15-10-2018 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL AM378_11615 df2910fcdd7c0f991b54520afd483cea 955 SUPERFAMILY SSF52172 829 952 5.27E-40 T 15-10-2018 IPR011006 CheY-like superfamily AM378_11615 df2910fcdd7c0f991b54520afd483cea 955 PRINTS PR00344 Bacterial sensor protein C-terminal signature 678 691 1.6E-17 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM378_11615 df2910fcdd7c0f991b54520afd483cea 955 PRINTS PR00344 Bacterial sensor protein C-terminal signature 619 633 1.6E-17 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM378_11615 df2910fcdd7c0f991b54520afd483cea 955 PRINTS PR00344 Bacterial sensor protein C-terminal signature 654 672 1.6E-17 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM378_11615 df2910fcdd7c0f991b54520afd483cea 955 PRINTS PR00344 Bacterial sensor protein C-terminal signature 637 647 1.6E-17 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM378_11615 df2910fcdd7c0f991b54520afd483cea 955 SMART SM00388 471 536 2.0E-19 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM378_11615 df2910fcdd7c0f991b54520afd483cea 955 SUPERFAMILY SSF47384 455 537 1.96E-19 T 15-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AM378_11615 df2910fcdd7c0f991b54520afd483cea 955 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 583 692 1.4E-27 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AM378_11615 df2910fcdd7c0f991b54520afd483cea 955 SMART SM00448 830 941 1.7E-38 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM378_11615 df2910fcdd7c0f991b54520afd483cea 955 SMART SM00387 583 694 5.2E-39 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AM378_11615 df2910fcdd7c0f991b54520afd483cea 955 Gene3D G3DSA:3.40.50.2300 823 953 1.7E-39 T 15-10-2018 AM378_11615 df2910fcdd7c0f991b54520afd483cea 955 Hamap MF_00979 Sensor histidine kinase RcsC [rcsC]. 24 946 27.433 T 15-10-2018 IPR030856 Sensor histidine kinase RcsC GO:0000155|GO:0000160|GO:0016021 AM378_11615 df2910fcdd7c0f991b54520afd483cea 955 Pfam PF00512 His Kinase A (phospho-acceptor) domain 471 535 4.3E-16 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM378_11615 df2910fcdd7c0f991b54520afd483cea 955 Gene3D G3DSA:3.30.565.10 537 695 4.4E-45 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AM378_11615 df2910fcdd7c0f991b54520afd483cea 955 Pfam PF09456 RcsC Alpha-Beta-Loop (ABL) 711 801 5.3E-32 T 15-10-2018 IPR019017 Signal transduction histidine kinase RcsC, alpha-beta loop, C-terminal GO:0000160|GO:0004673|GO:0005524|GO:0005886|GO:0006355|GO:0016021|GO:0018106 AM378_11615 df2910fcdd7c0f991b54520afd483cea 955 SUPERFAMILY SSF55874 525 693 2.36E-47 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AM378_11615 df2910fcdd7c0f991b54520afd483cea 955 Gene3D G3DSA:3.40.50.10970 709 822 2.3E-14 T 15-10-2018 IPR038388 RcsC, C-terminal domain superfamily AM378_11615 df2910fcdd7c0f991b54520afd483cea 955 Pfam PF00072 Response regulator receiver domain 833 941 2.7E-30 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM378_11615 df2910fcdd7c0f991b54520afd483cea 955 SUPERFAMILY SSF52172 703 816 2.98E-35 T 15-10-2018 IPR011006 CheY-like superfamily AM378_11615 df2910fcdd7c0f991b54520afd483cea 955 Gene3D G3DSA:1.10.287.130 448 534 1.2E-22 T 15-10-2018 AM378_18550 42c263484095f6b31d33d44190a69b14 507 Pfam PF13335 Magnesium chelatase, subunit ChlI C-terminal 401 493 6.4E-28 T 15-10-2018 IPR025158 Mg chelatase-related protein, C-terminal domain AM378_18550 42c263484095f6b31d33d44190a69b14 507 SUPERFAMILY SSF54211 10 169 1.48E-31 T 15-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AM378_18550 42c263484095f6b31d33d44190a69b14 507 SUPERFAMILY SSF52540 188 504 5.57E-51 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_18550 42c263484095f6b31d33d44190a69b14 507 Gene3D G3DSA:3.30.230.10 2 169 7.7E-6 T 15-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AM378_18550 42c263484095f6b31d33d44190a69b14 507 Pfam PF13541 Subunit ChlI of Mg-chelatase 21 142 2.6E-44 T 15-10-2018 AM378_18550 42c263484095f6b31d33d44190a69b14 507 TIGRFAM TIGR00368 TIGR00368: Mg chelatase-like protein 6 493 1.2E-212 T 15-10-2018 IPR004482 Mg chelatase-related protein AM378_18550 42c263484095f6b31d33d44190a69b14 507 Gene3D G3DSA:3.40.50.300 188 497 2.8E-54 T 15-10-2018 AM378_18550 42c263484095f6b31d33d44190a69b14 507 SMART SM00382 210 390 1.4E-9 T 15-10-2018 IPR003593 AAA+ ATPase domain AM378_18550 42c263484095f6b31d33d44190a69b14 507 Pfam PF01078 Magnesium chelatase, subunit ChlI 190 390 4.0E-90 T 15-10-2018 IPR000523 Magnesium chelatase ChlI domain AM378_18550 42c263484095f6b31d33d44190a69b14 507 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 289 303 1.6E-5 T 15-10-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 AM378_18550 42c263484095f6b31d33d44190a69b14 507 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 317 330 1.6E-5 T 15-10-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 AM378_18550 42c263484095f6b31d33d44190a69b14 507 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 209 224 1.6E-5 T 15-10-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 AM378_06825 b11eb05241117d1e5a8856bbc42d5f00 461 PIRSF PIRSF002744 1 459 4.2E-95 T 15-10-2018 IPR026030 Purine-cytosine permease Fcy2/21/22 GO:0005215|GO:0016021|GO:0055085 AM378_06825 b11eb05241117d1e5a8856bbc42d5f00 461 Gene3D G3DSA:1.10.4160.10 3 445 1.0E-35 T 15-10-2018 IPR038271 Purine-cytosine permease superfamily AM378_06825 b11eb05241117d1e5a8856bbc42d5f00 461 Pfam PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin 19 438 1.3E-39 T 15-10-2018 IPR001248 Purine-cytosine permease GO:0016020|GO:0022857|GO:0055085 AM378_18700 b2609851e3fced8cd1a16f3e9fe9ea32 71 Hamap MF_00501 50S ribosomal protein L31 [rpmE]. 1 68 30.999 T 15-10-2018 IPR027491 Ribosomal protein L31 type A GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM378_18700 b2609851e3fced8cd1a16f3e9fe9ea32 71 ProSitePatterns PS01143 Ribosomal protein L31 signature. 35 56 - T 15-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM378_18700 b2609851e3fced8cd1a16f3e9fe9ea32 71 PRINTS PR01249 Ribosomal protein L31 signature 46 64 2.1E-22 T 15-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM378_18700 b2609851e3fced8cd1a16f3e9fe9ea32 71 PRINTS PR01249 Ribosomal protein L31 signature 2 19 2.1E-22 T 15-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM378_18700 b2609851e3fced8cd1a16f3e9fe9ea32 71 PRINTS PR01249 Ribosomal protein L31 signature 31 46 2.1E-22 T 15-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM378_18700 b2609851e3fced8cd1a16f3e9fe9ea32 71 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 65 5.3E-34 T 15-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM378_18700 b2609851e3fced8cd1a16f3e9fe9ea32 71 SUPERFAMILY SSF143800 1 66 6.28E-27 T 15-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM378_18700 b2609851e3fced8cd1a16f3e9fe9ea32 71 Pfam PF01197 Ribosomal protein L31 1 64 4.6E-30 T 15-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM378_18700 b2609851e3fced8cd1a16f3e9fe9ea32 71 Gene3D G3DSA:2.30.170.50 1 70 2.5E-33 T 15-10-2018 AM378_22080 ed98a0a8cf8095ed0ee14a3c1b0b978e 394 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 177 383 4.0E-9 T 15-10-2018 AM378_22080 ed98a0a8cf8095ed0ee14a3c1b0b978e 394 Pfam PF04055 Radical SAM superfamily 30 196 1.0E-13 T 15-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AM378_22080 ed98a0a8cf8095ed0ee14a3c1b0b978e 394 TIGRFAM TIGR03942 sulfatase_rSAM: anaerobic sulfatase maturase 24 374 6.0E-118 T 15-10-2018 AM378_22080 ed98a0a8cf8095ed0ee14a3c1b0b978e 394 Gene3D G3DSA:3.20.20.70 20 375 6.1E-94 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM378_22080 ed98a0a8cf8095ed0ee14a3c1b0b978e 394 TIGRFAM TIGR04085 rSAM_more_4Fe4S: radical SAM additional 4Fe4S-binding SPASM domain 276 350 4.8E-14 T 15-10-2018 IPR023885 4Fe4S-binding SPASM domain AM378_22080 ed98a0a8cf8095ed0ee14a3c1b0b978e 394 Pfam PF13353 4Fe-4S single cluster domain 32 146 9.6E-5 T 15-10-2018 AM378_22080 ed98a0a8cf8095ed0ee14a3c1b0b978e 394 SUPERFAMILY SSF102114 24 345 3.27E-39 T 15-10-2018 AM378_22985 5af33806308f92d9c6065804ab7c0582 479 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 39 476 2.5E-163 T 15-10-2018 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 AM378_22985 5af33806308f92d9c6065804ab7c0582 479 Gene3D G3DSA:2.40.10.10 26 88 6.7E-7 T 15-10-2018 AM378_22985 5af33806308f92d9c6065804ab7c0582 479 Gene3D G3DSA:2.30.42.10 390 479 1.2E-29 T 15-10-2018 AM378_22985 5af33806308f92d9c6065804ab7c0582 479 Gene3D G3DSA:2.30.42.10 290 389 4.4E-27 T 15-10-2018 AM378_22985 5af33806308f92d9c6065804ab7c0582 479 Pfam PF13365 Trypsin-like peptidase domain 117 253 4.7E-30 T 15-10-2018 AM378_22985 5af33806308f92d9c6065804ab7c0582 479 SMART SM00228 399 471 1.2E-10 T 15-10-2018 IPR001478 PDZ domain GO:0005515 AM378_22985 5af33806308f92d9c6065804ab7c0582 479 SMART SM00228 292 374 3.5E-11 T 15-10-2018 IPR001478 PDZ domain GO:0005515 AM378_22985 5af33806308f92d9c6065804ab7c0582 479 SUPERFAMILY SSF50156 407 475 5.26E-16 T 15-10-2018 IPR036034 PDZ superfamily GO:0005515 AM378_22985 5af33806308f92d9c6065804ab7c0582 479 Gene3D G3DSA:2.40.10.120 104 289 3.1E-78 T 15-10-2018 AM378_22985 5af33806308f92d9c6065804ab7c0582 479 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 394 468 2.1E-11 T 15-10-2018 IPR001478 PDZ domain GO:0005515 AM378_22985 5af33806308f92d9c6065804ab7c0582 479 PRINTS PR00834 HtrA/DegQ protease family signature 246 263 2.0E-59 T 15-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AM378_22985 5af33806308f92d9c6065804ab7c0582 479 PRINTS PR00834 HtrA/DegQ protease family signature 148 168 2.0E-59 T 15-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AM378_22985 5af33806308f92d9c6065804ab7c0582 479 PRINTS PR00834 HtrA/DegQ protease family signature 127 139 2.0E-59 T 15-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AM378_22985 5af33806308f92d9c6065804ab7c0582 479 PRINTS PR00834 HtrA/DegQ protease family signature 224 241 2.0E-59 T 15-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AM378_22985 5af33806308f92d9c6065804ab7c0582 479 PRINTS PR00834 HtrA/DegQ protease family signature 189 213 2.0E-59 T 15-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AM378_22985 5af33806308f92d9c6065804ab7c0582 479 PRINTS PR00834 HtrA/DegQ protease family signature 332 344 2.0E-59 T 15-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AM378_22985 5af33806308f92d9c6065804ab7c0582 479 Pfam PF13180 PDZ domain 294 383 2.1E-14 T 15-10-2018 IPR001478 PDZ domain GO:0005515 AM378_22985 5af33806308f92d9c6065804ab7c0582 479 SUPERFAMILY SSF50494 2 301 6.75E-62 T 15-10-2018 IPR009003 Peptidase S1, PA clan AM378_22985 5af33806308f92d9c6065804ab7c0582 479 SUPERFAMILY SSF50156 274 383 1.6E-21 T 15-10-2018 IPR036034 PDZ superfamily GO:0005515 AM378_15540 ffabc2eaff4e1080f5b78df0a68b3c5c 288 Gene3D G3DSA:1.10.10.60 59 121 4.1E-16 T 15-10-2018 AM378_15540 ffabc2eaff4e1080f5b78df0a68b3c5c 288 SMART SM00342 22 105 4.3E-30 T 15-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM378_15540 ffabc2eaff4e1080f5b78df0a68b3c5c 288 SUPERFAMILY SSF46689 7 56 2.11E-8 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AM378_15540 ffabc2eaff4e1080f5b78df0a68b3c5c 288 Gene3D G3DSA:3.20.80.10 128 285 1.9E-18 T 15-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily AM378_15540 ffabc2eaff4e1080f5b78df0a68b3c5c 288 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 59 101 - T 15-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AM378_15540 ffabc2eaff4e1080f5b78df0a68b3c5c 288 SUPERFAMILY SSF46689 58 108 6.72E-11 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AM378_15540 ffabc2eaff4e1080f5b78df0a68b3c5c 288 Gene3D G3DSA:1.10.10.60 1 58 7.5E-24 T 15-10-2018 AM378_15540 ffabc2eaff4e1080f5b78df0a68b3c5c 288 Pfam PF12833 Helix-turn-helix domain 29 106 3.9E-19 T 15-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM378_15540 ffabc2eaff4e1080f5b78df0a68b3c5c 288 SUPERFAMILY SSF55136 166 269 3.66E-6 T 15-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily AM378_10405 de9ee0f17653c3576ecc2548bc4735a2 303 SUPERFAMILY SSF46785 3 108 9.76E-22 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM378_10405 de9ee0f17653c3576ecc2548bc4735a2 303 Gene3D G3DSA:1.10.10.10 3 89 1.3E-23 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_10405 de9ee0f17653c3576ecc2548bc4735a2 303 SUPERFAMILY SSF53850 87 293 8.14E-41 T 15-10-2018 AM378_10405 de9ee0f17653c3576ecc2548bc4735a2 303 Gene3D G3DSA:3.40.190.10 90 286 2.2E-64 T 15-10-2018 AM378_10405 de9ee0f17653c3576ecc2548bc4735a2 303 Pfam PF03466 LysR substrate binding domain 86 290 1.2E-39 T 15-10-2018 IPR005119 LysR, substrate-binding AM378_10405 de9ee0f17653c3576ecc2548bc4735a2 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 5.9E-19 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_10405 de9ee0f17653c3576ecc2548bc4735a2 303 Gene3D G3DSA:3.40.190.10 161 261 2.2E-64 T 15-10-2018 AM378_16905 d8997b46162c2285db362657ec865634 449 SUPERFAMILY SSF51246 331 444 2.62E-43 T 15-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 AM378_16905 d8997b46162c2285db362657ec865634 449 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 154 168 - T 15-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AM378_16905 d8997b46162c2285db362657ec865634 449 Gene3D G3DSA:3.30.1490.20 131 203 6.1E-158 T 15-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 AM378_16905 d8997b46162c2285db362657ec865634 449 SUPERFAMILY SSF52440 1 113 1.08E-46 T 15-10-2018 IPR016185 Pre-ATP-grasp domain superfamily AM378_16905 d8997b46162c2285db362657ec865634 449 SUPERFAMILY SSF56059 83 347 8.25E-70 T 15-10-2018 AM378_16905 d8997b46162c2285db362657ec865634 449 Gene3D G3DSA:3.30.470.20 86 433 6.1E-158 T 15-10-2018 AM378_16905 d8997b46162c2285db362657ec865634 449 SMART SM00878 336 441 4.7E-64 T 15-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 AM378_16905 d8997b46162c2285db362657ec865634 449 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 115 323 3.4E-86 T 15-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AM378_16905 d8997b46162c2285db362657ec865634 449 Gene3D G3DSA:3.40.50.20 1 85 1.8E-34 T 15-10-2018 AM378_16905 d8997b46162c2285db362657ec865634 449 TIGRFAM TIGR00514 accC: acetyl-CoA carboxylase, biotin carboxylase subunit 1 447 1.3E-250 T 15-10-2018 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase GO:0016874 AM378_16905 d8997b46162c2285db362657ec865634 449 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 286 293 - T 15-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AM378_16905 d8997b46162c2285db362657ec865634 449 Pfam PF02785 Biotin carboxylase C-terminal domain 336 441 2.4E-38 T 15-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 AM378_16905 d8997b46162c2285db362657ec865634 449 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 3.3E-44 T 15-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 AM378_15490 2bef07fae4d088e858774a20c942b613 475 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 348 456 1.8E-35 T 15-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 AM378_15490 2bef07fae4d088e858774a20c942b613 475 SUPERFAMILY SSF51905 1 338 9.88E-58 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AM378_15490 2bef07fae4d088e858774a20c942b613 475 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 43 53 - T 15-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 AM378_15490 2bef07fae4d088e858774a20c942b613 475 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 9 329 6.3E-63 T 15-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM378_15490 2bef07fae4d088e858774a20c942b613 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 9 31 1.2E-68 T 15-10-2018 AM378_15490 2bef07fae4d088e858774a20c942b613 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 266 280 1.2E-68 T 15-10-2018 AM378_15490 2bef07fae4d088e858774a20c942b613 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 309 316 1.2E-68 T 15-10-2018 AM378_15490 2bef07fae4d088e858774a20c942b613 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 178 203 1.2E-68 T 15-10-2018 AM378_15490 2bef07fae4d088e858774a20c942b613 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 142 151 1.2E-68 T 15-10-2018 AM378_15490 2bef07fae4d088e858774a20c942b613 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 344 365 1.2E-68 T 15-10-2018 AM378_15490 2bef07fae4d088e858774a20c942b613 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 409 424 1.2E-68 T 15-10-2018 AM378_15490 2bef07fae4d088e858774a20c942b613 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 42 57 1.2E-68 T 15-10-2018 AM378_15490 2bef07fae4d088e858774a20c942b613 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 431 451 1.2E-68 T 15-10-2018 AM378_15490 2bef07fae4d088e858774a20c942b613 475 Gene3D G3DSA:3.30.390.30 347 468 1.1E-45 T 15-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 AM378_15490 2bef07fae4d088e858774a20c942b613 475 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 8 459 1.1E-148 T 15-10-2018 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-6783984|Reactome: R-HSA-70268|Reactome: R-HSA-70895|Reactome: R-HSA-71064|Reactome: R-HSA-71403 AM378_15490 2bef07fae4d088e858774a20c942b613 475 SUPERFAMILY SSF55424 344 467 5.84E-39 T 15-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 AM378_15490 2bef07fae4d088e858774a20c942b613 475 Gene3D G3DSA:3.50.50.60 151 272 1.2E-124 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AM378_15490 2bef07fae4d088e858774a20c942b613 475 PIRSF PIRSF000350 1 469 9.6E-86 T 15-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 AM378_15490 2bef07fae4d088e858774a20c942b613 475 Gene3D G3DSA:3.50.50.60 10 333 1.2E-124 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AM378_15490 2bef07fae4d088e858774a20c942b613 475 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 139 157 5.2E-41 T 15-10-2018 AM378_15490 2bef07fae4d088e858774a20c942b613 475 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 178 196 5.2E-41 T 15-10-2018 AM378_15490 2bef07fae4d088e858774a20c942b613 475 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 265 281 5.2E-41 T 15-10-2018 AM378_15490 2bef07fae4d088e858774a20c942b613 475 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 294 316 5.2E-41 T 15-10-2018 AM378_15490 2bef07fae4d088e858774a20c942b613 475 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 10 29 5.2E-41 T 15-10-2018 AM378_07905 8bde6503041f0406ccc44db5b355754a 3704 Pfam PF05860 haemagglutination activity domain 84 209 1.9E-32 T 15-10-2018 IPR008638 Filamentous haemagglutinin, N-terminal AM378_07905 8bde6503041f0406ccc44db5b355754a 3704 SMART SM00912 88 210 4.2E-51 T 15-10-2018 IPR008638 Filamentous haemagglutinin, N-terminal AM378_07905 8bde6503041f0406ccc44db5b355754a 3704 Pfam PF04829 Pre-toxin domain with VENN motif 3355 3404 5.2E-21 T 15-10-2018 IPR006914 VENN motif-containing domain AM378_07905 8bde6503041f0406ccc44db5b355754a 3704 SUPERFAMILY SSF51126 80 392 3.45E-62 T 15-10-2018 IPR011050 Pectin lyase fold/virulence factor AM378_07905 8bde6503041f0406ccc44db5b355754a 3704 Pfam PF13018 Extended Signal Peptide of Type V secretion system 1 25 1.4E-6 T 15-10-2018 IPR024973 ESPR domain AM378_07905 8bde6503041f0406ccc44db5b355754a 3704 TIGRFAM TIGR01901 adhes_NPXG: filamentous hemagglutinin family N-terminal domain 106 205 1.4E-23 T 15-10-2018 IPR008638 Filamentous haemagglutinin, N-terminal AM378_07905 8bde6503041f0406ccc44db5b355754a 3704 Pfam PF05594 Haemagluttinin repeat 1168 1233 0.0076 T 15-10-2018 IPR008619 Filamentous haemagglutinin repeat AM378_07905 8bde6503041f0406ccc44db5b355754a 3704 Pfam PF05594 Haemagluttinin repeat 371 436 1.5 T 15-10-2018 IPR008619 Filamentous haemagglutinin repeat AM378_07905 8bde6503041f0406ccc44db5b355754a 3704 Pfam PF05594 Haemagluttinin repeat 1361 1416 0.19 T 15-10-2018 IPR008619 Filamentous haemagglutinin repeat AM378_07905 8bde6503041f0406ccc44db5b355754a 3704 Pfam PF05594 Haemagluttinin repeat 696 781 180.0 T 15-10-2018 IPR008619 Filamentous haemagglutinin repeat AM378_07905 8bde6503041f0406ccc44db5b355754a 3704 Pfam PF05594 Haemagluttinin repeat 962 1002 0.17 T 15-10-2018 IPR008619 Filamentous haemagglutinin repeat AM378_07905 8bde6503041f0406ccc44db5b355754a 3704 Pfam PF05594 Haemagluttinin repeat 263 339 1.2E-4 T 15-10-2018 IPR008619 Filamentous haemagglutinin repeat AM378_07905 8bde6503041f0406ccc44db5b355754a 3704 Pfam PF05594 Haemagluttinin repeat 1020 1146 2.9E-7 T 15-10-2018 IPR008619 Filamentous haemagglutinin repeat AM378_07905 8bde6503041f0406ccc44db5b355754a 3704 Pfam PF05594 Haemagluttinin repeat 610 671 5.1E-5 T 15-10-2018 IPR008619 Filamentous haemagglutinin repeat AM378_07905 8bde6503041f0406ccc44db5b355754a 3704 Pfam PF05594 Haemagluttinin repeat 524 562 200.0 T 15-10-2018 IPR008619 Filamentous haemagglutinin repeat AM378_07905 8bde6503041f0406ccc44db5b355754a 3704 Pfam PF05594 Haemagluttinin repeat 1288 1356 2.3E-6 T 15-10-2018 IPR008619 Filamentous haemagglutinin repeat AM378_07905 8bde6503041f0406ccc44db5b355754a 3704 Pfam PF05594 Haemagluttinin repeat 799 857 3.9 T 15-10-2018 IPR008619 Filamentous haemagglutinin repeat AM378_07905 8bde6503041f0406ccc44db5b355754a 3704 Pfam PF05594 Haemagluttinin repeat 899 959 0.0011 T 15-10-2018 IPR008619 Filamentous haemagglutinin repeat AM378_07905 8bde6503041f0406ccc44db5b355754a 3704 Pfam PF05594 Haemagluttinin repeat 1576 1633 90.0 T 15-10-2018 IPR008619 Filamentous haemagglutinin repeat AM378_07905 8bde6503041f0406ccc44db5b355754a 3704 Pfam PF05594 Haemagluttinin repeat 1431 1485 0.0021 T 15-10-2018 IPR008619 Filamentous haemagglutinin repeat AM378_07905 8bde6503041f0406ccc44db5b355754a 3704 Pfam PF14437 MafB19-like deaminase 3585 3697 2.7E-14 T 15-10-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 AM378_07905 8bde6503041f0406ccc44db5b355754a 3704 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 523 556 1.1E-5 T 15-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat AM378_07905 8bde6503041f0406ccc44db5b355754a 3704 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 880 905 2.4 T 15-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat AM378_07905 8bde6503041f0406ccc44db5b355754a 3704 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1304 1343 3.0E-9 T 15-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat AM378_07905 8bde6503041f0406ccc44db5b355754a 3704 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 889 925 0.32 T 15-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat AM378_07905 8bde6503041f0406ccc44db5b355754a 3704 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 947 989 3.2E-4 T 15-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat AM378_07905 8bde6503041f0406ccc44db5b355754a 3704 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1223 1262 1.8E-4 T 15-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat AM378_07905 8bde6503041f0406ccc44db5b355754a 3704 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1366 1406 5.8E-5 T 15-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat AM378_07905 8bde6503041f0406ccc44db5b355754a 3704 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 317 336 2.1 T 15-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat AM378_07905 8bde6503041f0406ccc44db5b355754a 3704 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1597 1633 1.5 T 15-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat AM378_07905 8bde6503041f0406ccc44db5b355754a 3704 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1264 1302 1.1E-4 T 15-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat AM378_07905 8bde6503041f0406ccc44db5b355754a 3704 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1093 1133 6.7E-8 T 15-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat AM378_07905 8bde6503041f0406ccc44db5b355754a 3704 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 991 1031 2.2E-4 T 15-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat AM378_07905 8bde6503041f0406ccc44db5b355754a 3704 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 365 399 0.032 T 15-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat AM378_07905 8bde6503041f0406ccc44db5b355754a 3704 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 746 782 1.7E-6 T 15-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat AM378_07905 8bde6503041f0406ccc44db5b355754a 3704 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1386 1419 0.0023 T 15-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat AM378_07905 8bde6503041f0406ccc44db5b355754a 3704 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 662 701 2.1E-9 T 15-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat AM378_07905 8bde6503041f0406ccc44db5b355754a 3704 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 622 661 5.1E-5 T 15-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat AM378_07905 8bde6503041f0406ccc44db5b355754a 3704 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1032 1072 0.0043 T 15-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat AM378_07905 8bde6503041f0406ccc44db5b355754a 3704 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1182 1222 7.0E-9 T 15-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat AM378_07905 8bde6503041f0406ccc44db5b355754a 3704 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 2137 2166 0.2 T 15-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat AM378_07905 8bde6503041f0406ccc44db5b355754a 3704 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1575 1609 0.83 T 15-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat AM378_07905 8bde6503041f0406ccc44db5b355754a 3704 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1345 1385 4.5E-4 T 15-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat AM378_07905 8bde6503041f0406ccc44db5b355754a 3704 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 581 621 3.1E-9 T 15-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat AM378_07905 8bde6503041f0406ccc44db5b355754a 3704 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 909 946 1.0E-4 T 15-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat AM378_07905 8bde6503041f0406ccc44db5b355754a 3704 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 769 801 0.0012 T 15-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat AM378_07905 8bde6503041f0406ccc44db5b355754a 3704 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1435 1469 1.2E-5 T 15-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat AM378_07905 8bde6503041f0406ccc44db5b355754a 3704 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1812 1852 1.8E-5 T 15-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat AM378_07905 8bde6503041f0406ccc44db5b355754a 3704 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 845 884 5.5E-8 T 15-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat AM378_07905 8bde6503041f0406ccc44db5b355754a 3704 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1134 1178 0.6 T 15-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat AM378_07905 8bde6503041f0406ccc44db5b355754a 3704 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 573 599 9.8E-6 T 15-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat AM378_07905 8bde6503041f0406ccc44db5b355754a 3704 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 705 742 0.24 T 15-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat AM378_07905 8bde6503041f0406ccc44db5b355754a 3704 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 926 960 0.0012 T 15-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat AM378_07905 8bde6503041f0406ccc44db5b355754a 3704 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 804 843 0.032 T 15-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat AM378_07905 8bde6503041f0406ccc44db5b355754a 3704 Gene3D G3DSA:2.160.20.10 74 382 5.4E-103 T 15-10-2018 IPR012334 Pectin lyase fold AM378_07905 8bde6503041f0406ccc44db5b355754a 3704 Pfam PF13332 Haemagluttinin repeat 2838 3011 6.1E-43 T 15-10-2018 IPR025157 Hemagglutinin repeat AM378_07905 8bde6503041f0406ccc44db5b355754a 3704 Pfam PF13332 Haemagluttinin repeat 2425 2499 0.001 T 15-10-2018 IPR025157 Hemagglutinin repeat AM378_07905 8bde6503041f0406ccc44db5b355754a 3704 Pfam PF13332 Haemagluttinin repeat 2209 2345 4.1E-12 T 15-10-2018 IPR025157 Hemagglutinin repeat AM378_07905 8bde6503041f0406ccc44db5b355754a 3704 Pfam PF13332 Haemagluttinin repeat 2585 2734 4.7E-10 T 15-10-2018 IPR025157 Hemagglutinin repeat AM378_13255 ca44a965bf9b801367eae5e125ca07ec 525 PRINTS PR00097 Anthranilate synthase component II signature 54 63 1.4E-6 T 15-10-2018 AM378_13255 ca44a965bf9b801367eae5e125ca07ec 525 PRINTS PR00097 Anthranilate synthase component II signature 177 190 1.4E-6 T 15-10-2018 AM378_13255 ca44a965bf9b801367eae5e125ca07ec 525 PRINTS PR00097 Anthranilate synthase component II signature 81 92 1.4E-6 T 15-10-2018 AM378_13255 ca44a965bf9b801367eae5e125ca07ec 525 SUPERFAMILY SSF52402 197 420 8.6E-58 T 15-10-2018 AM378_13255 ca44a965bf9b801367eae5e125ca07ec 525 SUPERFAMILY SSF54810 405 525 2.09E-51 T 15-10-2018 AM378_13255 ca44a965bf9b801367eae5e125ca07ec 525 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 81 97 5.1E-6 T 15-10-2018 AM378_13255 ca44a965bf9b801367eae5e125ca07ec 525 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 51 65 5.1E-6 T 15-10-2018 AM378_13255 ca44a965bf9b801367eae5e125ca07ec 525 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 10 24 5.1E-6 T 15-10-2018 AM378_13255 ca44a965bf9b801367eae5e125ca07ec 525 Hamap MF_00344 GMP synthase [glutamine-hydrolyzing] [guaA]. 7 525 56.322 T 15-10-2018 IPR022955 GMP synthase GO:0003922|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221 AM378_13255 ca44a965bf9b801367eae5e125ca07ec 525 Pfam PF00117 Glutamine amidotransferase class-I 12 200 5.0E-40 T 15-10-2018 IPR017926 Glutamine amidotransferase AM378_13255 ca44a965bf9b801367eae5e125ca07ec 525 Pfam PF02540 NAD synthase 216 281 1.1E-6 T 15-10-2018 IPR022310 NAD/GMP synthase AM378_13255 ca44a965bf9b801367eae5e125ca07ec 525 PRINTS PR00096 Glutamine amidotransferase superfamily signature 177 190 1.2E-7 T 15-10-2018 AM378_13255 ca44a965bf9b801367eae5e125ca07ec 525 PRINTS PR00096 Glutamine amidotransferase superfamily signature 81 92 1.2E-7 T 15-10-2018 AM378_13255 ca44a965bf9b801367eae5e125ca07ec 525 PRINTS PR00096 Glutamine amidotransferase superfamily signature 54 63 1.2E-7 T 15-10-2018 AM378_13255 ca44a965bf9b801367eae5e125ca07ec 525 Gene3D G3DSA:3.40.50.620 209 405 5.2E-74 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM378_13255 ca44a965bf9b801367eae5e125ca07ec 525 Gene3D G3DSA:3.40.50.880 9 206 1.1E-55 T 15-10-2018 IPR029062 Class I glutamine amidotransferase-like AM378_13255 ca44a965bf9b801367eae5e125ca07ec 525 SUPERFAMILY SSF52317 4 204 5.77E-57 T 15-10-2018 IPR029062 Class I glutamine amidotransferase-like AM378_13255 ca44a965bf9b801367eae5e125ca07ec 525 TIGRFAM TIGR00888 guaA_Nterm: GMP synthase (glutamine-hydrolyzing), N-terminal domain 10 205 5.9E-84 T 15-10-2018 IPR004739 GMP synthase, glutamine amidotransferase GO:0003922|GO:0005524|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 AM378_13255 ca44a965bf9b801367eae5e125ca07ec 525 Pfam PF00958 GMP synthase C terminal domain 433 524 8.6E-44 T 15-10-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 AM378_13255 ca44a965bf9b801367eae5e125ca07ec 525 Gene3D G3DSA:3.30.300.10 406 525 2.6E-51 T 15-10-2018 AM378_13255 ca44a965bf9b801367eae5e125ca07ec 525 TIGRFAM TIGR00884 guaA_Cterm: GMP synthase (glutamine-hydrolyzing), C-terminal domain 213 525 2.3E-155 T 15-10-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 AM378_21345 37575bdee9e3d06f2a8ca28fb2ca7b38 502 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 372 421 4.7E-22 T 15-10-2018 IPR010214 Transcription termination factor NusA, C-terminal duplication AM378_21345 37575bdee9e3d06f2a8ca28fb2ca7b38 502 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 448 496 4.2E-18 T 15-10-2018 IPR010214 Transcription termination factor NusA, C-terminal duplication AM378_21345 37575bdee9e3d06f2a8ca28fb2ca7b38 502 SUPERFAMILY SSF54814 279 334 8.72E-12 T 15-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 AM378_21345 37575bdee9e3d06f2a8ca28fb2ca7b38 502 SUPERFAMILY SSF47794 436 499 9.26E-18 T 15-10-2018 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 Reactome: R-HSA-912446 AM378_21345 37575bdee9e3d06f2a8ca28fb2ca7b38 502 Gene3D G3DSA:1.10.150.20 438 497 1.2E-26 T 15-10-2018 AM378_21345 37575bdee9e3d06f2a8ca28fb2ca7b38 502 SUPERFAMILY SSF50249 132 199 3.59E-17 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold AM378_21345 37575bdee9e3d06f2a8ca28fb2ca7b38 502 SUPERFAMILY SSF69705 1 126 1.44E-41 T 15-10-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 AM378_21345 37575bdee9e3d06f2a8ca28fb2ca7b38 502 Gene3D G3DSA:2.40.50.140 135 198 4.6E-19 T 15-10-2018 AM378_21345 37575bdee9e3d06f2a8ca28fb2ca7b38 502 Gene3D G3DSA:1.10.150.20 359 428 1.6E-31 T 15-10-2018 AM378_21345 37575bdee9e3d06f2a8ca28fb2ca7b38 502 TIGRFAM TIGR01953 NusA: transcription termination factor NusA 4 348 1.6E-124 T 15-10-2018 IPR010213 Transcription termination factor NusA GO:0003723 AM378_21345 37575bdee9e3d06f2a8ca28fb2ca7b38 502 Gene3D G3DSA:3.30.300.20 199 277 2.4E-31 T 15-10-2018 IPR015946 K homology domain-like, alpha/beta AM378_21345 37575bdee9e3d06f2a8ca28fb2ca7b38 502 Gene3D G3DSA:3.30.300.20 278 352 2.1E-19 T 15-10-2018 IPR015946 K homology domain-like, alpha/beta AM378_21345 37575bdee9e3d06f2a8ca28fb2ca7b38 502 Pfam PF14520 Helix-hairpin-helix domain 377 418 2.6E-4 T 15-10-2018 AM378_21345 37575bdee9e3d06f2a8ca28fb2ca7b38 502 Pfam PF14520 Helix-hairpin-helix domain 439 493 1.3E-10 T 15-10-2018 AM378_21345 37575bdee9e3d06f2a8ca28fb2ca7b38 502 Gene3D G3DSA:3.30.1480.10 1 129 1.9E-46 T 15-10-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 AM378_21345 37575bdee9e3d06f2a8ca28fb2ca7b38 502 Pfam PF13184 NusA-like KH domain 230 297 9.1E-28 T 15-10-2018 IPR025249 KH domain, NusA-like GO:0003723 AM378_21345 37575bdee9e3d06f2a8ca28fb2ca7b38 502 SUPERFAMILY SSF54814 201 278 2.52E-29 T 15-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 AM378_21345 37575bdee9e3d06f2a8ca28fb2ca7b38 502 SUPERFAMILY SSF47794 362 422 2.67E-17 T 15-10-2018 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 Reactome: R-HSA-912446 AM378_21345 37575bdee9e3d06f2a8ca28fb2ca7b38 502 Hamap MF_00945_B Transcription termination/antitermination protein NusA [nusA]. 2 417 27.539 T 15-10-2018 IPR030842 Transcription termination/antitermination protein NusA, bacterial GO:0006353|GO:0031564 AM378_21345 37575bdee9e3d06f2a8ca28fb2ca7b38 502 Pfam PF08529 NusA N-terminal domain 4 123 2.6E-36 T 15-10-2018 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 AM378_21345 37575bdee9e3d06f2a8ca28fb2ca7b38 502 SMART SM00316 133 200 3.2E-9 T 15-10-2018 IPR022967 RNA-binding domain, S1 AM378_02760 5d534e226a6e209c565876a5675ba883 379 SUPERFAMILY SSF53756 1 377 4.4E-50 T 15-10-2018 AM378_02760 5d534e226a6e209c565876a5675ba883 379 Pfam PF00534 Glycosyl transferases group 1 218 335 4.8E-12 T 15-10-2018 IPR001296 Glycosyl transferase, family 1 AM378_02760 5d534e226a6e209c565876a5675ba883 379 Gene3D G3DSA:3.40.50.2000 1 222 3.3E-30 T 15-10-2018 AM378_02760 5d534e226a6e209c565876a5675ba883 379 Pfam PF13439 Glycosyltransferase Family 4 15 207 3.0E-19 T 15-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 AM378_02760 5d534e226a6e209c565876a5675ba883 379 Gene3D G3DSA:3.40.50.2000 223 361 3.0E-13 T 15-10-2018 AM378_11700 e2f6496f042675abe836d68038c15414 558 Hamap MF_01659 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [menD]. 4 555 32.017 T 15-10-2018 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 AM378_11700 e2f6496f042675abe836d68038c15414 558 Gene3D G3DSA:3.40.50.1220 213 338 4.7E-45 T 15-10-2018 AM378_11700 e2f6496f042675abe836d68038c15414 558 SUPERFAMILY SSF52518 7 176 1.28E-29 T 15-10-2018 IPR029061 Thiamin diphosphate-binding fold AM378_11700 e2f6496f042675abe836d68038c15414 558 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 9 169 1.2E-26 T 15-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 AM378_11700 e2f6496f042675abe836d68038c15414 558 Pfam PF16582 Middle domain of thiamine pyrophosphate 184 390 3.6E-86 T 15-10-2018 IPR032264 Menaquinone biosynthesis protein MenD, middle domain KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 AM378_11700 e2f6496f042675abe836d68038c15414 558 Gene3D G3DSA:3.40.50.970 354 557 8.8E-58 T 15-10-2018 AM378_11700 e2f6496f042675abe836d68038c15414 558 PIRSF PIRSF004983 1 558 7.1E-173 T 15-10-2018 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 AM378_11700 e2f6496f042675abe836d68038c15414 558 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 423 536 2.3E-8 T 15-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 AM378_11700 e2f6496f042675abe836d68038c15414 558 TIGRFAM TIGR00173 menD: 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase 10 432 1.0E-138 T 15-10-2018 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 AM378_11700 e2f6496f042675abe836d68038c15414 558 SUPERFAMILY SSF52518 368 548 5.16E-32 T 15-10-2018 IPR029061 Thiamin diphosphate-binding fold AM378_11700 e2f6496f042675abe836d68038c15414 558 Gene3D G3DSA:3.40.50.970 1 196 7.5E-61 T 15-10-2018 AM378_11395 445ec6c1593c16001d7119eeeb790288 396 Pfam PF03786 D-mannonate dehydratase (UxuA) 1 388 2.9E-153 T 15-10-2018 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242 AM378_11395 445ec6c1593c16001d7119eeeb790288 396 PIRSF PIRSF016049 1 391 8.8E-181 T 15-10-2018 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242 AM378_11395 445ec6c1593c16001d7119eeeb790288 396 Gene3D G3DSA:3.20.20.150 1 171 5.3E-66 T 15-10-2018 AM378_11395 445ec6c1593c16001d7119eeeb790288 396 Gene3D G3DSA:3.20.20.150 172 392 1.6E-78 T 15-10-2018 AM378_11395 445ec6c1593c16001d7119eeeb790288 396 Hamap MF_00106 Mannonate dehydratase [uxuA]. 1 396 222.162 T 15-10-2018 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242 AM378_11395 445ec6c1593c16001d7119eeeb790288 396 TIGRFAM TIGR00695 uxuA: mannonate dehydratase 1 392 2.0E-205 T 15-10-2018 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242 AM378_11395 445ec6c1593c16001d7119eeeb790288 396 SUPERFAMILY SSF51658 1 383 3.73E-78 T 15-10-2018 IPR036237 Xylose isomerase-like superfamily AM378_14065 3f58ad56de5038cda1b6bc7d5b66bb1d 390 Gene3D G3DSA:2.40.50.100 60 93 6.9E-11 T 15-10-2018 AM378_14065 3f58ad56de5038cda1b6bc7d5b66bb1d 390 Pfam PF00529 HlyD membrane-fusion protein of T1SS 36 346 1.6E-15 T 15-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AM378_14065 3f58ad56de5038cda1b6bc7d5b66bb1d 390 TIGRFAM TIGR00998 8a0101: efflux pump membrane protein 20 345 4.0E-137 T 15-10-2018 IPR005694 Efflux pump membrane protein Emr GO:0006855|GO:0015238 AM378_14065 3f58ad56de5038cda1b6bc7d5b66bb1d 390 SUPERFAMILY SSF111369 194 269 9.42E-10 T 15-10-2018 AM378_14065 3f58ad56de5038cda1b6bc7d5b66bb1d 390 Gene3D G3DSA:2.40.30.170 232 353 1.4E-35 T 15-10-2018 AM378_14065 3f58ad56de5038cda1b6bc7d5b66bb1d 390 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 61 292 2.5E-13 T 15-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AM378_14065 3f58ad56de5038cda1b6bc7d5b66bb1d 390 Gene3D G3DSA:1.10.287.470 94 113 6.9E-11 T 15-10-2018 AM378_14065 3f58ad56de5038cda1b6bc7d5b66bb1d 390 Gene3D G3DSA:1.10.287.470 114 217 1.9E-5 T 15-10-2018 AM378_14065 3f58ad56de5038cda1b6bc7d5b66bb1d 390 SUPERFAMILY SSF111369 58 113 3.79E-7 T 15-10-2018 AM378_14330 27d98c2fb0f06813b4be12cf1056c45a 887 SUPERFAMILY SSF55021 702 773 1.5E-8 T 15-10-2018 AM378_14330 27d98c2fb0f06813b4be12cf1056c45a 887 Pfam PF01966 HD domain 465 598 2.6E-16 T 15-10-2018 IPR006674 HD domain AM378_14330 27d98c2fb0f06813b4be12cf1056c45a 887 Pfam PF01842 ACT domain 813 874 1.5E-8 T 15-10-2018 IPR002912 ACT domain AM378_14330 27d98c2fb0f06813b4be12cf1056c45a 887 SUPERFAMILY SSF55021 810 874 3.09E-9 T 15-10-2018 AM378_14330 27d98c2fb0f06813b4be12cf1056c45a 887 Gene3D G3DSA:1.10.3210.10 454 589 8.8E-8 T 15-10-2018 AM378_14330 27d98c2fb0f06813b4be12cf1056c45a 887 SUPERFAMILY SSF81301 22 185 3.93E-24 T 15-10-2018 AM378_14330 27d98c2fb0f06813b4be12cf1056c45a 887 PIRSF PIRSF006288 19 887 0.0 T 15-10-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 AM378_14330 27d98c2fb0f06813b4be12cf1056c45a 887 SUPERFAMILY SSF81593 209 323 3.06E-10 T 15-10-2018 AM378_14330 27d98c2fb0f06813b4be12cf1056c45a 887 SUPERFAMILY SSF109604 454 629 1.63E-13 T 15-10-2018 AM378_14330 27d98c2fb0f06813b4be12cf1056c45a 887 Pfam PF08335 GlnD PII-uridylyltransferase 189 328 9.9E-38 T 15-10-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 AM378_14330 27d98c2fb0f06813b4be12cf1056c45a 887 SMART SM00471 461 608 2.3E-12 T 15-10-2018 IPR003607 HD/PDEase domain AM378_14330 27d98c2fb0f06813b4be12cf1056c45a 887 Pfam PF01909 Nucleotidyltransferase domain 81 116 2.4E-6 T 15-10-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 AM378_14330 27d98c2fb0f06813b4be12cf1056c45a 887 TIGRFAM TIGR01693 UTase_glnD: protein-P-II uridylyltransferase 47 881 1.1E-303 T 15-10-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 AM378_14330 27d98c2fb0f06813b4be12cf1056c45a 887 Hamap MF_00277 Bifunctional uridylyltransferase/uridylyl-removing enzyme [glnD]. 1 887 353.956 T 15-10-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 AM378_18390 971f3493c2839d795af402c02cc8c49d 301 SUPERFAMILY SSF46785 5 85 5.79E-17 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM378_18390 971f3493c2839d795af402c02cc8c49d 301 Gene3D G3DSA:3.40.190.10 91 294 8.2E-58 T 15-10-2018 AM378_18390 971f3493c2839d795af402c02cc8c49d 301 Pfam PF03466 LysR substrate binding domain 101 298 6.5E-34 T 15-10-2018 IPR005119 LysR, substrate-binding AM378_18390 971f3493c2839d795af402c02cc8c49d 301 SUPERFAMILY SSF53850 91 295 7.45E-42 T 15-10-2018 AM378_18390 971f3493c2839d795af402c02cc8c49d 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 67 3.3E-14 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_18390 971f3493c2839d795af402c02cc8c49d 301 Gene3D G3DSA:3.40.190.10 172 269 8.2E-58 T 15-10-2018 AM378_18390 971f3493c2839d795af402c02cc8c49d 301 Gene3D G3DSA:1.10.10.10 1 89 6.3E-27 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_21740 c86f77d9828018107269c6d8f566653b 1170 SUPERFAMILY SSF52540 458 836 4.56E-35 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_21740 c86f77d9828018107269c6d8f566653b 1170 Gene3D G3DSA:3.90.1570.30 221 342 6.4E-10 T 15-10-2018 AM378_21740 c86f77d9828018107269c6d8f566653b 1170 Pfam PF00271 Helicase conserved C-terminal domain 721 829 1.0E-9 T 15-10-2018 IPR001650 Helicase, C-terminal AM378_21740 c86f77d9828018107269c6d8f566653b 1170 Gene3D G3DSA:3.40.50.300 636 860 7.8E-49 T 15-10-2018 AM378_21740 c86f77d9828018107269c6d8f566653b 1170 Pfam PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) 239 396 1.8E-21 T 15-10-2018 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal GO:0003677|GO:0004519|GO:0006304 AM378_21740 c86f77d9828018107269c6d8f566653b 1170 SMART SM00490 742 831 1.6E-7 T 15-10-2018 IPR001650 Helicase, C-terminal AM378_21740 c86f77d9828018107269c6d8f566653b 1170 SMART SM00487 441 657 3.6E-19 T 15-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AM378_21740 c86f77d9828018107269c6d8f566653b 1170 Gene3D G3DSA:3.40.50.300 426 635 6.0E-54 T 15-10-2018 AM378_21740 c86f77d9828018107269c6d8f566653b 1170 Pfam PF04851 Type III restriction enzyme, res subunit 443 622 3.9E-37 T 15-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 AM378_21740 c86f77d9828018107269c6d8f566653b 1170 Pfam PF08463 EcoEI R protein C-terminal 1005 1165 8.7E-27 T 15-10-2018 IPR013670 EcoEI R protein C-terminal domain GO:0003677|GO:0003824|GO:0006304 AM378_23475 a5204f14e57e6c28fa0301f81267c1e6 292 Pfam PF04954 Siderophore-interacting protein 145 291 6.6E-31 T 15-10-2018 IPR007037 Siderophore-interacting protein, C-terminal domain AM378_23475 a5204f14e57e6c28fa0301f81267c1e6 292 Gene3D G3DSA:2.40.30.10 2 128 1.0E-31 T 15-10-2018 AM378_23475 a5204f14e57e6c28fa0301f81267c1e6 292 Gene3D G3DSA:3.40.50.80 141 292 3.9E-20 T 15-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AM378_23475 a5204f14e57e6c28fa0301f81267c1e6 292 Pfam PF08021 Siderophore-interacting FAD-binding domain 13 128 6.8E-38 T 15-10-2018 IPR013113 FAD-binding 9, siderophore-interacting AM378_23475 a5204f14e57e6c28fa0301f81267c1e6 292 SUPERFAMILY SSF63380 6 129 3.58E-10 T 15-10-2018 IPR017938 Riboflavin synthase-like beta-barrel AM378_18290 b89b4e44e4754daf1283d1d2d4e0cc6e 399 Gene3D G3DSA:3.50.50.60 7 388 6.8E-128 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AM378_18290 b89b4e44e4754daf1283d1d2d4e0cc6e 399 TIGRFAM TIGR00275 TIGR00275: flavoprotein, HI0933 family 6 392 2.0E-126 T 15-10-2018 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like AM378_18290 b89b4e44e4754daf1283d1d2d4e0cc6e 399 SUPERFAMILY SSF160996 190 338 3.27E-43 T 15-10-2018 AM378_18290 b89b4e44e4754daf1283d1d2d4e0cc6e 399 Pfam PF03486 HI0933-like protein 4 392 1.9E-154 T 15-10-2018 AM378_18290 b89b4e44e4754daf1283d1d2d4e0cc6e 399 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 155 164 1.1E-8 T 15-10-2018 AM378_18290 b89b4e44e4754daf1283d1d2d4e0cc6e 399 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 5 27 1.1E-8 T 15-10-2018 AM378_18290 b89b4e44e4754daf1283d1d2d4e0cc6e 399 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 362 369 1.1E-8 T 15-10-2018 AM378_18290 b89b4e44e4754daf1283d1d2d4e0cc6e 399 Gene3D G3DSA:1.10.8.260 262 322 6.8E-128 T 15-10-2018 IPR023166 HI0933-like insert domain superfamily AM378_18290 b89b4e44e4754daf1283d1d2d4e0cc6e 399 Gene3D G3DSA:2.40.30.10 188 339 6.8E-128 T 15-10-2018 AM378_18290 b89b4e44e4754daf1283d1d2d4e0cc6e 399 SUPERFAMILY SSF51905 3 395 7.42E-59 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AM378_05515 4289fd65086ba69d31f440f4b31d6262 65 Hamap MF_00514 50S ribosomal protein L35 [rpmI]. 1 64 18.116 T 15-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 AM378_05515 4289fd65086ba69d31f440f4b31d6262 65 Pfam PF01632 Ribosomal protein L35 2 61 4.8E-23 T 15-10-2018 IPR021137 Ribosomal protein L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM378_05515 4289fd65086ba69d31f440f4b31d6262 65 TIGRFAM TIGR00001 rpmI_bact: ribosomal protein bL35 2 64 1.0E-26 T 15-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 AM378_05515 4289fd65086ba69d31f440f4b31d6262 65 SUPERFAMILY SSF143034 2 64 9.94E-23 T 15-10-2018 IPR037229 Ribosomal protein L35 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM378_05515 4289fd65086ba69d31f440f4b31d6262 65 PRINTS PR00064 Ribosomal protein L35 signature 21 35 1.6E-22 T 15-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 AM378_05515 4289fd65086ba69d31f440f4b31d6262 65 PRINTS PR00064 Ribosomal protein L35 signature 36 54 1.6E-22 T 15-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 AM378_05515 4289fd65086ba69d31f440f4b31d6262 65 PRINTS PR00064 Ribosomal protein L35 signature 3 20 1.6E-22 T 15-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 AM378_05515 4289fd65086ba69d31f440f4b31d6262 65 Gene3D G3DSA:2.40.50.530 1 65 7.7E-20 T 15-10-2018 AM378_05515 4289fd65086ba69d31f440f4b31d6262 65 ProSitePatterns PS00936 Ribosomal protein L35 signature. 5 31 - T 15-10-2018 IPR018265 Ribosomal protein L35, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM378_19225 e9ae81ac243d4b9ef823f3af7fa4cf34 139 SUPERFAMILY SSF102546 1 139 7.59E-42 T 15-10-2018 IPR023750 RbsD-like superfamily GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 AM378_19225 e9ae81ac243d4b9ef823f3af7fa4cf34 139 Hamap MF_01661 D-ribose pyranase [rbsD]. 1 139 32.222 T 15-10-2018 IPR023064 D-ribose pyranase GO:0016872 AM378_19225 e9ae81ac243d4b9ef823f3af7fa4cf34 139 Pfam PF05025 RbsD / FucU transport protein family 1 138 2.4E-46 T 15-10-2018 IPR007721 D-ribose pyranase RbsD/L-fucose mutarotase FucU GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 AM378_19225 e9ae81ac243d4b9ef823f3af7fa4cf34 139 Gene3D G3DSA:3.40.1650.10 8 136 1.8E-36 T 15-10-2018 IPR023750 RbsD-like superfamily GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 AM378_00320 3fa68455157808a9a8adf7474c76c416 550 Pfam PF00149 Calcineurin-like phosphoesterase 35 254 3.2E-17 T 15-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 AM378_00320 3fa68455157808a9a8adf7474c76c416 550 PRINTS PR01607 Apyrase family signature 207 224 1.2E-59 T 15-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AM378_00320 3fa68455157808a9a8adf7474c76c416 550 PRINTS PR01607 Apyrase family signature 238 261 1.2E-59 T 15-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AM378_00320 3fa68455157808a9a8adf7474c76c416 550 PRINTS PR01607 Apyrase family signature 417 440 1.2E-59 T 15-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AM378_00320 3fa68455157808a9a8adf7474c76c416 550 PRINTS PR01607 Apyrase family signature 283 303 1.2E-59 T 15-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AM378_00320 3fa68455157808a9a8adf7474c76c416 550 PRINTS PR01607 Apyrase family signature 484 503 1.2E-59 T 15-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AM378_00320 3fa68455157808a9a8adf7474c76c416 550 PRINTS PR01607 Apyrase family signature 32 50 1.2E-59 T 15-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AM378_00320 3fa68455157808a9a8adf7474c76c416 550 ProSitePatterns PS00786 5'-nucleotidase signature 2. 109 120 - T 15-10-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AM378_00320 3fa68455157808a9a8adf7474c76c416 550 Pfam PF02872 5'-nucleotidase, C-terminal domain 363 509 1.1E-33 T 15-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AM378_00320 3fa68455157808a9a8adf7474c76c416 550 Gene3D G3DSA:3.90.780.10 363 549 2.1E-61 T 15-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AM378_00320 3fa68455157808a9a8adf7474c76c416 550 SUPERFAMILY SSF56300 27 360 4.47E-97 T 15-10-2018 AM378_00320 3fa68455157808a9a8adf7474c76c416 550 ProSitePatterns PS00785 5'-nucleotidase signature 1. 34 46 - T 15-10-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AM378_00320 3fa68455157808a9a8adf7474c76c416 550 SUPERFAMILY SSF55816 363 542 6.93E-53 T 15-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AM378_00320 3fa68455157808a9a8adf7474c76c416 550 Gene3D G3DSA:3.60.21.10 26 362 3.3E-133 T 15-10-2018 IPR029052 Metallo-dependent phosphatase-like AM378_20130 c349cc00e1c20ad572ad3ada5abac962 237 Gene3D G3DSA:3.30.450.40 48 235 7.3E-36 T 15-10-2018 IPR029016 GAF-like domain superfamily AM378_20130 c349cc00e1c20ad572ad3ada5abac962 237 Pfam PF04340 Protein of unknown function, DUF484 13 234 6.7E-74 T 15-10-2018 IPR007435 Protein of unknown function DUF484 AM378_07100 80790c99a29f2a83a1613cc79efc4e25 424 Gene3D G3DSA:1.10.8.1210 2 47 1.2E-10 T 15-10-2018 AM378_07100 80790c99a29f2a83a1613cc79efc4e25 424 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 188 420 4.8E-74 T 15-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 AM378_07100 80790c99a29f2a83a1613cc79efc4e25 424 SMART SM00839 190 420 2.3E-91 T 15-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 AM378_07100 80790c99a29f2a83a1613cc79efc4e25 424 Gene3D G3DSA:3.40.50.10860 48 187 2.9E-64 T 15-10-2018 AM378_07100 80790c99a29f2a83a1613cc79efc4e25 424 SUPERFAMILY SSF51735 188 423 1.78E-74 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily AM378_07100 80790c99a29f2a83a1613cc79efc4e25 424 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 99 113 3.8E-32 T 15-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 AM378_07100 80790c99a29f2a83a1613cc79efc4e25 424 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 221 241 3.8E-32 T 15-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 AM378_07100 80790c99a29f2a83a1613cc79efc4e25 424 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 179 201 3.8E-32 T 15-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 AM378_07100 80790c99a29f2a83a1613cc79efc4e25 424 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 348 359 3.8E-32 T 15-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 AM378_07100 80790c99a29f2a83a1613cc79efc4e25 424 ProSitePatterns PS00074 Glu / Leu / Phe / Val dehydrogenases active site. 107 120 - T 15-10-2018 IPR033524 Leu/Phe/Val dehydrogenases active site Reactome: R-HSA-2151201|Reactome: R-HSA-70614 AM378_07100 80790c99a29f2a83a1613cc79efc4e25 424 Gene3D G3DSA:3.40.50.720 188 423 4.0E-84 T 15-10-2018 AM378_07100 80790c99a29f2a83a1613cc79efc4e25 424 SUPERFAMILY SSF53223 12 190 2.91E-68 T 15-10-2018 AM378_07100 80790c99a29f2a83a1613cc79efc4e25 424 PIRSF PIRSF000185 10 423 2.6E-159 T 15-10-2018 IPR014362 Glutamate dehydrogenase GO:0016639|GO:0055114 AM378_07100 80790c99a29f2a83a1613cc79efc4e25 424 Pfam PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 42 170 1.4E-54 T 15-10-2018 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 AM378_23615 b21dcac3f2db8bb1a3010669c9165a10 353 Hamap MF_01113 DNA polymerase IV [dinB]. 1 350 37.279 T 15-10-2018 IPR022880 DNA polymerase IV GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 AM378_23615 b21dcac3f2db8bb1a3010669c9165a10 353 Gene3D G3DSA:2.30.40.20 21 73 6.2E-64 T 15-10-2018 AM378_23615 b21dcac3f2db8bb1a3010669c9165a10 353 Gene3D G3DSA:1.10.150.20 166 228 4.7E-19 T 15-10-2018 AM378_23615 b21dcac3f2db8bb1a3010669c9165a10 353 SUPERFAMILY SSF56672 1 232 2.4E-91 T 15-10-2018 AM378_23615 b21dcac3f2db8bb1a3010669c9165a10 353 Pfam PF11798 IMS family HHH motif 168 196 1.1E-7 T 15-10-2018 IPR024728 DNA polymerase type-Y, HhH motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 AM378_23615 b21dcac3f2db8bb1a3010669c9165a10 353 SUPERFAMILY SSF100879 241 351 2.35E-26 T 15-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 AM378_23615 b21dcac3f2db8bb1a3010669c9165a10 353 Gene3D G3DSA:3.30.1490.100 237 351 4.3E-29 T 15-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 AM378_23615 b21dcac3f2db8bb1a3010669c9165a10 353 Gene3D G3DSA:3.30.70.270 4 164 6.2E-64 T 15-10-2018 AM378_23615 b21dcac3f2db8bb1a3010669c9165a10 353 Pfam PF11799 impB/mucB/samB family C-terminal domain 235 342 1.1E-9 T 15-10-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 AM378_23615 b21dcac3f2db8bb1a3010669c9165a10 353 Pfam PF00817 impB/mucB/samB family 7 154 1.4E-48 T 15-10-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 AM378_22290 84dc6f05736796bb50c60c6bef125a34 529 TIGRFAM TIGR00503 prfC: peptide chain release factor 3 5 529 0.0 T 15-10-2018 IPR004548 Peptide chain release factor 3 GO:0003924|GO:0005737|GO:0006415 AM378_22290 84dc6f05736796bb50c60c6bef125a34 529 Gene3D G3DSA:3.40.50.300 110 275 3.1E-119 T 15-10-2018 AM378_22290 84dc6f05736796bb50c60c6bef125a34 529 PRINTS PR00315 GTP-binding elongation factor signature 101 112 6.6E-11 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM378_22290 84dc6f05736796bb50c60c6bef125a34 529 PRINTS PR00315 GTP-binding elongation factor signature 15 28 6.6E-11 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM378_22290 84dc6f05736796bb50c60c6bef125a34 529 PRINTS PR00315 GTP-binding elongation factor signature 137 146 6.6E-11 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM378_22290 84dc6f05736796bb50c60c6bef125a34 529 PRINTS PR00315 GTP-binding elongation factor signature 85 95 6.6E-11 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM378_22290 84dc6f05736796bb50c60c6bef125a34 529 PRINTS PR00315 GTP-binding elongation factor signature 65 73 6.6E-11 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM378_22290 84dc6f05736796bb50c60c6bef125a34 529 SUPERFAMILY SSF54980 393 468 1.8E-16 T 15-10-2018 IPR035647 EF-G domain III/V-like AM378_22290 84dc6f05736796bb50c60c6bef125a34 529 Gene3D G3DSA:3.40.50.300 72 379 3.1E-119 T 15-10-2018 AM378_22290 84dc6f05736796bb50c60c6bef125a34 529 Hamap MF_00072 Peptide chain release factor 3 [prfC]. 4 527 52.529 T 15-10-2018 IPR004548 Peptide chain release factor 3 GO:0003924|GO:0005737|GO:0006415 AM378_22290 84dc6f05736796bb50c60c6bef125a34 529 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 14 153 7.7E-18 T 15-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 AM378_22290 84dc6f05736796bb50c60c6bef125a34 529 Pfam PF00009 Elongation factor Tu GTP binding domain 13 277 2.6E-46 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM378_22290 84dc6f05736796bb50c60c6bef125a34 529 Gene3D G3DSA:3.30.70.3280 390 529 6.4E-52 T 15-10-2018 IPR038467 Peptide chain release factor 3, C-terminal domain superfamily AM378_22290 84dc6f05736796bb50c60c6bef125a34 529 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 58 73 - T 15-10-2018 IPR031157 Tr-type G domain, conserved site AM378_22290 84dc6f05736796bb50c60c6bef125a34 529 Pfam PF16658 Class II release factor RF3, C-terminal domain 387 514 4.9E-46 T 15-10-2018 IPR032090 Peptide chain release factor 3, C-terminal AM378_22290 84dc6f05736796bb50c60c6bef125a34 529 Pfam PF03144 Elongation factor Tu domain 2 314 380 2.0E-11 T 15-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 AM378_22290 84dc6f05736796bb50c60c6bef125a34 529 SUPERFAMILY SSF52540 10 277 2.15E-84 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_22290 84dc6f05736796bb50c60c6bef125a34 529 SUPERFAMILY SSF50447 262 393 4.42E-29 T 15-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily AM378_17385 13bbd20b2290c2c22669e88f441842c2 138 Pfam PF01741 Large-conductance mechanosensitive channel, MscL 3 130 2.0E-47 T 15-10-2018 IPR037673 Large-conductance mechanosensitive channel/anditomin synthesis protein L AM378_17385 13bbd20b2290c2c22669e88f441842c2 138 SUPERFAMILY SSF81330 12 127 4.71E-37 T 15-10-2018 IPR036019 Gated mechanosensitive channel AM378_17385 13bbd20b2290c2c22669e88f441842c2 138 Gene3D G3DSA:1.10.1200.120 3 134 4.1E-45 T 15-10-2018 IPR036019 Gated mechanosensitive channel AM378_17385 13bbd20b2290c2c22669e88f441842c2 138 TIGRFAM TIGR00220 mscL: large conductance mechanosensitive channel protein 3 133 2.5E-57 T 15-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 AM378_17385 13bbd20b2290c2c22669e88f441842c2 138 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 6 20 3.7E-14 T 15-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 AM378_17385 13bbd20b2290c2c22669e88f441842c2 138 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 84 92 3.7E-14 T 15-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 AM378_17385 13bbd20b2290c2c22669e88f441842c2 138 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 93 102 3.7E-14 T 15-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 AM378_17385 13bbd20b2290c2c22669e88f441842c2 138 Hamap MF_00115 Large-conductance mechanosensitive channel [mscL]. 3 132 24.987 T 15-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 AM378_17385 13bbd20b2290c2c22669e88f441842c2 138 ProSitePatterns PS01327 Large-conductance mechanosensitive channels mscL family signature. 13 26 - T 15-10-2018 IPR019823 Large-conductance mechanosensitive channel, conserved site AM378_20790 6d0a30bec5400acbe0eb85663e26d7d1 1031 Pfam PF00668 Condensation domain 39 126 3.3E-7 T 15-10-2018 IPR001242 Condensation domain AM378_20790 6d0a30bec5400acbe0eb85663e26d7d1 1031 Pfam PF00668 Condensation domain 177 324 7.5E-6 T 15-10-2018 IPR001242 Condensation domain AM378_20790 6d0a30bec5400acbe0eb85663e26d7d1 1031 SUPERFAMILY SSF52777 5 193 1.11E-11 T 15-10-2018 AM378_20790 6d0a30bec5400acbe0eb85663e26d7d1 1031 Gene3D G3DSA:3.30.559.10 35 160 2.7E-6 T 15-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 AM378_20790 6d0a30bec5400acbe0eb85663e26d7d1 1031 Pfam PF00501 AMP-binding enzyme 458 843 8.1E-78 T 15-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 AM378_20790 6d0a30bec5400acbe0eb85663e26d7d1 1031 Gene3D G3DSA:3.40.50.12780 441 835 4.6E-98 T 15-10-2018 AM378_20790 6d0a30bec5400acbe0eb85663e26d7d1 1031 ProSitePatterns PS00455 Putative AMP-binding domain signature. 586 597 - T 15-10-2018 IPR020845 AMP-binding, conserved site AM378_20790 6d0a30bec5400acbe0eb85663e26d7d1 1031 Gene3D G3DSA:3.30.559.30 178 421 5.7E-35 T 15-10-2018 AM378_20790 6d0a30bec5400acbe0eb85663e26d7d1 1031 SUPERFAMILY SSF56801 413 937 2.35E-122 T 15-10-2018 AM378_20790 6d0a30bec5400acbe0eb85663e26d7d1 1031 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 467 867 3.3E-106 T 15-10-2018 IPR010071 Amino acid adenylation domain AM378_20790 6d0a30bec5400acbe0eb85663e26d7d1 1031 SUPERFAMILY SSF52777 179 414 5.0E-26 T 15-10-2018 AM378_20790 6d0a30bec5400acbe0eb85663e26d7d1 1031 Gene3D G3DSA:3.30.300.30 838 949 3.8E-22 T 15-10-2018 AM378_00710 2350419194d40f41d880788ab79b0ba8 860 Gene3D G3DSA:1.10.730.10 8 791 0.0 T 15-10-2018 AM378_00710 2350419194d40f41d880788ab79b0ba8 860 Pfam PF08264 Anticodon-binding domain of tRNA 700 822 1.2E-17 T 15-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 AM378_00710 2350419194d40f41d880788ab79b0ba8 860 SUPERFAMILY SSF50677 226 415 1.99E-56 T 15-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 AM378_00710 2350419194d40f41d880788ab79b0ba8 860 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 53 - T 15-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM378_00710 2350419194d40f41d880788ab79b0ba8 860 TIGRFAM TIGR00396 leuS_bact: leucine--tRNA ligase 5 859 0.0 T 15-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 AM378_00710 2350419194d40f41d880788ab79b0ba8 860 PRINTS PR00985 Leucyl-tRNA synthetase signature 215 234 1.8E-52 T 15-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 AM378_00710 2350419194d40f41d880788ab79b0ba8 860 PRINTS PR00985 Leucyl-tRNA synthetase signature 524 546 1.8E-52 T 15-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 AM378_00710 2350419194d40f41d880788ab79b0ba8 860 PRINTS PR00985 Leucyl-tRNA synthetase signature 557 567 1.8E-52 T 15-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 AM378_00710 2350419194d40f41d880788ab79b0ba8 860 PRINTS PR00985 Leucyl-tRNA synthetase signature 485 503 1.8E-52 T 15-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 AM378_00710 2350419194d40f41d880788ab79b0ba8 860 PRINTS PR00985 Leucyl-tRNA synthetase signature 185 198 1.8E-52 T 15-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 AM378_00710 2350419194d40f41d880788ab79b0ba8 860 PRINTS PR00985 Leucyl-tRNA synthetase signature 153 169 1.8E-52 T 15-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 AM378_00710 2350419194d40f41d880788ab79b0ba8 860 PRINTS PR00985 Leucyl-tRNA synthetase signature 127 144 1.8E-52 T 15-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 AM378_00710 2350419194d40f41d880788ab79b0ba8 860 SUPERFAMILY SSF52374 5 668 1.59E-140 T 15-10-2018 AM378_00710 2350419194d40f41d880788ab79b0ba8 860 Gene3D G3DSA:3.40.50.620 33 566 0.0 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM378_00710 2350419194d40f41d880788ab79b0ba8 860 Gene3D G3DSA:3.90.740.10 227 414 0.0 T 15-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 AM378_00710 2350419194d40f41d880788ab79b0ba8 860 Gene3D G3DSA:3.10.20.590 799 860 1.7E-25 T 15-10-2018 AM378_00710 2350419194d40f41d880788ab79b0ba8 860 Gene3D G3DSA:3.10.330.110 567 628 0.0 T 15-10-2018 AM378_00710 2350419194d40f41d880788ab79b0ba8 860 Pfam PF13603 Leucyl-tRNA synthetase, Domain 2 221 403 2.0E-78 T 15-10-2018 IPR025709 Leucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 KEGG: 00970+6.1.1.4 AM378_00710 2350419194d40f41d880788ab79b0ba8 860 Hamap MF_00049_B Leucine--tRNA ligase [leuS]. 4 859 23.494 T 15-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 AM378_00710 2350419194d40f41d880788ab79b0ba8 860 SUPERFAMILY SSF47323 662 859 5.98E-39 T 15-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM378_00710 2350419194d40f41d880788ab79b0ba8 860 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 417 571 1.3E-6 T 15-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM378_00710 2350419194d40f41d880788ab79b0ba8 860 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 618 652 1.6E-7 T 15-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM378_00710 2350419194d40f41d880788ab79b0ba8 860 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 16 171 3.3E-26 T 15-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM378_03685 d6a8610a8b9d36acbcb23532eccfbdc6 425 Gene3D G3DSA:3.40.47.10 271 425 6.0E-48 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 AM378_03685 d6a8610a8b9d36acbcb23532eccfbdc6 425 Gene3D G3DSA:3.40.47.10 1 265 1.3E-79 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 AM378_03685 d6a8610a8b9d36acbcb23532eccfbdc6 425 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 164 180 - T 15-10-2018 IPR018201 Beta-ketoacyl synthase, active site AM378_03685 d6a8610a8b9d36acbcb23532eccfbdc6 425 TIGRFAM TIGR03150 fabF: beta-ketoacyl-acyl-carrier-protein synthase II 4 420 2.6E-158 T 15-10-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 AM378_03685 d6a8610a8b9d36acbcb23532eccfbdc6 425 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 265 378 1.2E-33 T 15-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal AM378_03685 d6a8610a8b9d36acbcb23532eccfbdc6 425 SUPERFAMILY SSF53901 228 422 4.07E-62 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 AM378_03685 d6a8610a8b9d36acbcb23532eccfbdc6 425 SUPERFAMILY SSF53901 3 262 1.36E-67 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 AM378_03685 d6a8610a8b9d36acbcb23532eccfbdc6 425 PIRSF PIRSF000447 1 424 8.5E-156 T 15-10-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 AM378_03685 d6a8610a8b9d36acbcb23532eccfbdc6 425 SMART SM00825 Beta-ketoacyl synthase 6 424 1.6E-13 T 15-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain AM378_03685 d6a8610a8b9d36acbcb23532eccfbdc6 425 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 4 257 9.2E-56 T 15-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal AM378_01175 4caf151566474e01298543e6c0fea011 201 SMART SM00448 2 115 1.5E-22 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM378_01175 4caf151566474e01298543e6c0fea011 201 ProSitePatterns PS00622 LuxR-type HTH domain signature. 156 183 - T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM378_01175 4caf151566474e01298543e6c0fea011 201 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 156 172 2.8E-13 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM378_01175 4caf151566474e01298543e6c0fea011 201 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 142 156 2.8E-13 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM378_01175 4caf151566474e01298543e6c0fea011 201 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 172 184 2.8E-13 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM378_01175 4caf151566474e01298543e6c0fea011 201 Pfam PF00196 Bacterial regulatory proteins, luxR family 142 195 3.2E-19 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM378_01175 4caf151566474e01298543e6c0fea011 201 Gene3D G3DSA:1.10.10.10 140 199 2.4E-19 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_01175 4caf151566474e01298543e6c0fea011 201 Pfam PF00072 Response regulator receiver domain 5 116 1.2E-24 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM378_01175 4caf151566474e01298543e6c0fea011 201 SUPERFAMILY SSF46894 136 198 3.06E-19 T 15-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AM378_01175 4caf151566474e01298543e6c0fea011 201 SMART SM00421 139 196 1.1E-23 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM378_01175 4caf151566474e01298543e6c0fea011 201 Gene3D G3DSA:3.40.50.2300 2 137 7.9E-29 T 15-10-2018 AM378_01175 4caf151566474e01298543e6c0fea011 201 SUPERFAMILY SSF52172 1 126 1.57E-29 T 15-10-2018 IPR011006 CheY-like superfamily AM378_19005 c045759ca195bcb24e1ee579fa0c913e 287 TIGRFAM TIGR00255 TIGR00255: TIGR00255 family protein 1 287 5.0E-132 T 15-10-2018 IPR005229 Conserved hypothetical protein CHP00255 AM378_19005 c045759ca195bcb24e1ee579fa0c913e 287 Pfam PF03755 YicC-like family, N-terminal region 2 153 5.6E-44 T 15-10-2018 IPR013527 YicC-like, N-terminal AM378_19005 c045759ca195bcb24e1ee579fa0c913e 287 Pfam PF08340 Domain of unknown function (DUF1732) 203 287 3.7E-34 T 15-10-2018 IPR013551 Domain of unknown function DUF1732 AM378_22235 2b4506b4debd0752f572db4543c1eb4e 198 SUPERFAMILY SSF46689 3 87 1.33E-18 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AM378_22235 2b4506b4debd0752f572db4543c1eb4e 198 Pfam PF00440 Bacterial regulatory proteins, tetR family 17 63 7.4E-15 T 15-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM378_22235 2b4506b4debd0752f572db4543c1eb4e 198 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 17 30 2.1E-8 T 15-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM378_22235 2b4506b4debd0752f572db4543c1eb4e 198 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 38 61 2.1E-8 T 15-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM378_22235 2b4506b4debd0752f572db4543c1eb4e 198 Gene3D G3DSA:1.10.357.10 1 196 2.9E-52 T 15-10-2018 AM378_11190 0fc289c0368fcf78b1aaa8d3403edeb3 496 ProSitePatterns PS00211 ABC transporters family signature. 396 410 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM378_11190 0fc289c0368fcf78b1aaa8d3403edeb3 496 Pfam PF00005 ABC transporter 20 170 2.8E-29 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM378_11190 0fc289c0368fcf78b1aaa8d3403edeb3 496 SUPERFAMILY SSF52540 3 224 3.74E-58 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_11190 0fc289c0368fcf78b1aaa8d3403edeb3 496 Gene3D G3DSA:3.40.50.300 272 493 6.9E-41 T 15-10-2018 AM378_11190 0fc289c0368fcf78b1aaa8d3403edeb3 496 SUPERFAMILY SSF52540 275 486 4.62E-44 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_11190 0fc289c0368fcf78b1aaa8d3403edeb3 496 Pfam PF00005 ABC transporter 275 423 8.9E-16 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM378_11190 0fc289c0368fcf78b1aaa8d3403edeb3 496 SMART SM00382 279 480 4.8E-8 T 15-10-2018 IPR003593 AAA+ ATPase domain AM378_11190 0fc289c0368fcf78b1aaa8d3403edeb3 496 SMART SM00382 29 217 2.2E-11 T 15-10-2018 IPR003593 AAA+ ATPase domain AM378_11190 0fc289c0368fcf78b1aaa8d3403edeb3 496 Gene3D G3DSA:3.40.50.300 1 238 4.1E-56 T 15-10-2018 AM378_15105 4f48d6215ae28c1a5867090da63ccc5f 366 Gene3D G3DSA:3.40.50.2300 51 143 5.0E-16 T 15-10-2018 AM378_15105 4f48d6215ae28c1a5867090da63ccc5f 366 Gene3D G3DSA:3.40.50.2300 154 342 1.7E-15 T 15-10-2018 AM378_15105 4f48d6215ae28c1a5867090da63ccc5f 366 Pfam PF13407 Periplasmic binding protein domain 59 306 2.6E-28 T 15-10-2018 IPR025997 Periplasmic binding protein AM378_15105 4f48d6215ae28c1a5867090da63ccc5f 366 SUPERFAMILY SSF53822 55 340 1.23E-37 T 15-10-2018 IPR028082 Periplasmic binding protein-like I AM378_22590 3dcf265b72e8c453caf9ac78089403ea 382 TIGRFAM TIGR01368 CPSaseIIsmall: carbamoyl-phosphate synthase, small subunit 5 375 5.3E-151 T 15-10-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AM378_22590 3dcf265b72e8c453caf9ac78089403ea 382 PRINTS PR00097 Anthranilate synthase component II signature 264 275 1.1E-5 T 15-10-2018 AM378_22590 3dcf265b72e8c453caf9ac78089403ea 382 PRINTS PR00097 Anthranilate synthase component II signature 236 245 1.1E-5 T 15-10-2018 AM378_22590 3dcf265b72e8c453caf9ac78089403ea 382 PRINTS PR00097 Anthranilate synthase component II signature 349 362 1.1E-5 T 15-10-2018 AM378_22590 3dcf265b72e8c453caf9ac78089403ea 382 SMART SM01097 3 133 4.7E-92 T 15-10-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AM378_22590 3dcf265b72e8c453caf9ac78089403ea 382 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 306 317 2.3E-39 T 15-10-2018 AM378_22590 3dcf265b72e8c453caf9ac78089403ea 382 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 264 280 2.3E-39 T 15-10-2018 AM378_22590 3dcf265b72e8c453caf9ac78089403ea 382 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 194 208 2.3E-39 T 15-10-2018 AM378_22590 3dcf265b72e8c453caf9ac78089403ea 382 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 281 298 2.3E-39 T 15-10-2018 AM378_22590 3dcf265b72e8c453caf9ac78089403ea 382 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 233 247 2.3E-39 T 15-10-2018 AM378_22590 3dcf265b72e8c453caf9ac78089403ea 382 Gene3D G3DSA:3.50.30.20 2 151 5.1E-62 T 15-10-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AM378_22590 3dcf265b72e8c453caf9ac78089403ea 382 Hamap MF_01209 Carbamoyl-phosphate synthase small chain [carA]. 3 378 48.423 T 15-10-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AM378_22590 3dcf265b72e8c453caf9ac78089403ea 382 SUPERFAMILY SSF52021 3 142 3.4E-57 T 15-10-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AM378_22590 3dcf265b72e8c453caf9ac78089403ea 382 SUPERFAMILY SSF52317 153 377 5.96E-65 T 15-10-2018 IPR029062 Class I glutamine amidotransferase-like AM378_22590 3dcf265b72e8c453caf9ac78089403ea 382 Pfam PF00117 Glutamine amidotransferase class-I 198 372 1.3E-49 T 15-10-2018 IPR017926 Glutamine amidotransferase AM378_22590 3dcf265b72e8c453caf9ac78089403ea 382 PRINTS PR00096 Glutamine amidotransferase superfamily signature 349 362 3.2E-11 T 15-10-2018 AM378_22590 3dcf265b72e8c453caf9ac78089403ea 382 PRINTS PR00096 Glutamine amidotransferase superfamily signature 264 275 3.2E-11 T 15-10-2018 AM378_22590 3dcf265b72e8c453caf9ac78089403ea 382 PRINTS PR00096 Glutamine amidotransferase superfamily signature 236 245 3.2E-11 T 15-10-2018 AM378_22590 3dcf265b72e8c453caf9ac78089403ea 382 Gene3D G3DSA:3.40.50.880 152 379 8.2E-78 T 15-10-2018 IPR029062 Class I glutamine amidotransferase-like AM378_22590 3dcf265b72e8c453caf9ac78089403ea 382 Pfam PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain 5 132 2.2E-52 T 15-10-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AM378_04265 3f6fba8a8b33399120c1971797076208 208 SUPERFAMILY SSF46894 125 188 2.45E-13 T 15-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AM378_04265 3f6fba8a8b33399120c1971797076208 208 Gene3D G3DSA:1.10.10.10 101 188 2.8E-12 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_04265 3f6fba8a8b33399120c1971797076208 208 Pfam PF00196 Bacterial regulatory proteins, luxR family 131 183 2.0E-14 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM378_04265 3f6fba8a8b33399120c1971797076208 208 SMART SM00421 128 185 2.6E-8 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM378_03940 d23ffc438130c4abca87856b4477e645 403 Pfam PF00155 Aminotransferase class I and II 50 390 1.6E-69 T 15-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AM378_03940 d23ffc438130c4abca87856b4477e645 403 TIGRFAM TIGR01821 5aminolev_synth: 5-aminolevulinic acid synthase 5 400 8.0E-154 T 15-10-2018 IPR010961 Tetrapyrrole biosynthesis, 5-aminolevulinic acid synthase GO:0003870|GO:0030170|GO:0033014 KEGG: 00260+2.3.1.37|KEGG: 00860+2.3.1.37|MetaCyc: PWY-5189|MetaCyc: PWY-7536|Reactome: R-HSA-189451 AM378_03940 d23ffc438130c4abca87856b4477e645 403 Gene3D G3DSA:3.40.640.10 62 296 3.3E-140 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AM378_03940 d23ffc438130c4abca87856b4477e645 403 Gene3D G3DSA:3.90.1150.10 14 386 3.3E-140 T 15-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AM378_03940 d23ffc438130c4abca87856b4477e645 403 SUPERFAMILY SSF53383 5 395 2.26E-101 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM378_13555 449442db76b7987c47645d6e1a8cd65f 297 Gene3D G3DSA:3.40.50.10490 1 218 4.5E-84 T 15-10-2018 AM378_13555 449442db76b7987c47645d6e1a8cd65f 297 TIGRFAM TIGR00274 TIGR00274: N-acetylmuramic acid 6-phosphate etherase 6 295 5.5E-128 T 15-10-2018 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00520+4.2.1.126 AM378_13555 449442db76b7987c47645d6e1a8cd65f 297 SUPERFAMILY SSF53697 4 248 1.25E-74 T 15-10-2018 AM378_13555 449442db76b7987c47645d6e1a8cd65f 297 ProSitePatterns PS01272 Glucokinase regulatory protein family signature. 185 202 - T 15-10-2018 IPR005486 Glucokinase regulatory protein, conserved site KEGG: 00520+4.2.1.126|Reactome: R-HSA-170822|Reactome: R-HSA-5619107 AM378_13555 449442db76b7987c47645d6e1a8cd65f 297 Hamap MF_00068 N-acetylmuramic acid 6-phosphate etherase [murQ]. 2 295 43.905 T 15-10-2018 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00520+4.2.1.126 AM378_13555 449442db76b7987c47645d6e1a8cd65f 297 Pfam PF13580 SIS domain 39 165 4.1E-9 T 15-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 AM378_13555 449442db76b7987c47645d6e1a8cd65f 297 Gene3D G3DSA:1.10.8.1080 219 297 1.3E-30 T 15-10-2018 AM378_03465 37dde548292d1b4c7973d8532b6eb91a 348 ProSitePatterns PS00144 Asparaginase / glutaminase active site signature 1. 28 36 - T 15-10-2018 IPR020827 Asparaginase/glutaminase, active site 1 GO:0006520 AM378_03465 37dde548292d1b4c7973d8532b6eb91a 348 Gene3D G3DSA:3.40.50.40 235 348 1.5E-44 T 15-10-2018 IPR027473 L-asparaginase, C-terminal Reactome: R-HSA-70614 AM378_03465 37dde548292d1b4c7973d8532b6eb91a 348 SMART SM00870 25 342 3.8E-147 T 15-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 AM378_03465 37dde548292d1b4c7973d8532b6eb91a 348 PRINTS PR00139 Asparaginase/glutaminase family signature 26 37 7.5E-23 T 15-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 AM378_03465 37dde548292d1b4c7973d8532b6eb91a 348 PRINTS PR00139 Asparaginase/glutaminase family signature 103 121 7.5E-23 T 15-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 AM378_03465 37dde548292d1b4c7973d8532b6eb91a 348 PRINTS PR00139 Asparaginase/glutaminase family signature 282 300 7.5E-23 T 15-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 AM378_03465 37dde548292d1b4c7973d8532b6eb91a 348 TIGRFAM TIGR00520 asnASE_II: L-asparaginase, type II 1 348 2.0E-163 T 15-10-2018 IPR004550 L-asparaginase, type II GO:0004067|GO:0006528 AM378_03465 37dde548292d1b4c7973d8532b6eb91a 348 PIRSF PIRSF500176 22 348 2.1E-84 T 15-10-2018 AM378_03465 37dde548292d1b4c7973d8532b6eb91a 348 PIRSF PIRSF001220 20 348 1.7E-94 T 15-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 AM378_03465 37dde548292d1b4c7973d8532b6eb91a 348 SUPERFAMILY SSF53774 23 347 3.53E-109 T 15-10-2018 IPR036152 Asparaginase/glutaminase-like superfamily Reactome: R-HSA-70614 AM378_03465 37dde548292d1b4c7973d8532b6eb91a 348 Gene3D G3DSA:3.40.50.1170 23 234 7.7E-91 T 15-10-2018 IPR037152 L-asparaginase, N-terminal domain superfamily Reactome: R-HSA-70614 AM378_03465 37dde548292d1b4c7973d8532b6eb91a 348 Pfam PF00710 Asparaginase, N-terminal 25 216 1.1E-63 T 15-10-2018 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 AM378_03465 37dde548292d1b4c7973d8532b6eb91a 348 ProSitePatterns PS00917 Asparaginase / glutaminase active site signature 2. 104 114 - T 15-10-2018 IPR027475 Asparaginase/glutaminase, active site 2 Reactome: R-HSA-70614 AM378_02580 040c01ea501ad5df5c540de88d2faef7 104 ProDom PD012578 PLASMID TOXIN CCDB CYTOTOXIC LETB POST-SEGREGATION SYSTEM CCDB-LIKE GYRASE FUSED-CCDB 12 103 9.0E-27 T 15-10-2018 IPR002712 Toxin CcdB GO:0006276|GO:0008657 AM378_02580 040c01ea501ad5df5c540de88d2faef7 104 SUPERFAMILY SSF50118 1 104 7.85E-27 T 15-10-2018 AM378_02580 040c01ea501ad5df5c540de88d2faef7 104 Gene3D G3DSA:2.30.30.110 1 104 5.7E-31 T 15-10-2018 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor AM378_02580 040c01ea501ad5df5c540de88d2faef7 104 Pfam PF01845 CcdB protein 2 103 1.9E-31 T 15-10-2018 IPR002712 Toxin CcdB GO:0006276|GO:0008657 AM378_08640 aa2bb455de2010becb9f9245bd8bae20 480 SUPERFAMILY SSF52935 329 479 2.75E-38 T 15-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AM378_08640 aa2bb455de2010becb9f9245bd8bae20 480 SUPERFAMILY SSF51621 4 344 2.13E-88 T 15-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 AM378_08640 aa2bb455de2010becb9f9245bd8bae20 480 Pfam PF00224 Pyruvate kinase, barrel domain 6 344 1.4E-132 T 15-10-2018 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AM378_08640 aa2bb455de2010becb9f9245bd8bae20 480 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 6 479 9.6E-173 T 15-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AM378_08640 aa2bb455de2010becb9f9245bd8bae20 480 ProSitePatterns PS00110 Pyruvate kinase active site signature. 218 230 - T 15-10-2018 IPR018209 Pyruvate kinase, active site GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AM378_08640 aa2bb455de2010becb9f9245bd8bae20 480 Gene3D G3DSA:2.40.33.10 74 172 1.3E-154 T 15-10-2018 IPR015806 Pyruvate kinase, insert domain superfamily GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AM378_08640 aa2bb455de2010becb9f9245bd8bae20 480 Gene3D G3DSA:3.20.20.60 6 341 1.3E-154 T 15-10-2018 AM378_08640 aa2bb455de2010becb9f9245bd8bae20 480 PRINTS PR01050 Pyruvate kinase family signature 300 318 2.0E-51 T 15-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AM378_08640 aa2bb455de2010becb9f9245bd8bae20 480 PRINTS PR01050 Pyruvate kinase family signature 63 79 2.0E-51 T 15-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AM378_08640 aa2bb455de2010becb9f9245bd8bae20 480 PRINTS PR01050 Pyruvate kinase family signature 250 274 2.0E-51 T 15-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AM378_08640 aa2bb455de2010becb9f9245bd8bae20 480 PRINTS PR01050 Pyruvate kinase family signature 190 204 2.0E-51 T 15-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AM378_08640 aa2bb455de2010becb9f9245bd8bae20 480 PRINTS PR01050 Pyruvate kinase family signature 275 299 2.0E-51 T 15-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AM378_08640 aa2bb455de2010becb9f9245bd8bae20 480 PRINTS PR01050 Pyruvate kinase family signature 319 335 2.0E-51 T 15-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AM378_08640 aa2bb455de2010becb9f9245bd8bae20 480 PRINTS PR01050 Pyruvate kinase family signature 223 249 2.0E-51 T 15-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AM378_08640 aa2bb455de2010becb9f9245bd8bae20 480 Pfam PF02887 Pyruvate kinase, alpha/beta domain 363 477 1.4E-27 T 15-10-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AM378_08640 aa2bb455de2010becb9f9245bd8bae20 480 Gene3D G3DSA:3.40.1380.20 342 474 1.3E-154 T 15-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AM378_08640 aa2bb455de2010becb9f9245bd8bae20 480 SUPERFAMILY SSF50800 74 168 6.98E-25 T 15-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily AM378_03350 87b08e8712565b1437cafa054e4856ce 552 Gene3D G3DSA:3.40.50.300 1 348 1.1E-12 T 15-10-2018 AM378_03350 87b08e8712565b1437cafa054e4856ce 552 SUPERFAMILY SSF52540 1 348 2.15E-17 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_03350 87b08e8712565b1437cafa054e4856ce 552 Pfam PF11398 Protein of unknown function (DUF2813) 1 375 1.7E-157 T 15-10-2018 IPR022602 Protein of unknown function DUF2813 AM378_12915 f2eee04808de5473aea8f85f5f5ba163 233 Gene3D G3DSA:1.10.8.60 167 233 4.0E-26 T 15-10-2018 AM378_12915 f2eee04808de5473aea8f85f5f5ba163 233 Pfam PF00308 Bacterial dnaA protein 16 212 2.4E-16 T 15-10-2018 IPR013317 Chromosomal replication initiator protein DnaA AM378_12915 f2eee04808de5473aea8f85f5f5ba163 233 SUPERFAMILY SSF52540 17 211 3.43E-21 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_12915 f2eee04808de5473aea8f85f5f5ba163 233 Gene3D G3DSA:3.40.50.300 1 164 1.1E-35 T 15-10-2018 AM378_12915 f2eee04808de5473aea8f85f5f5ba163 233 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 43 63 1.7E-6 T 15-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like AM378_12915 f2eee04808de5473aea8f85f5f5ba163 233 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 131 158 1.7E-6 T 15-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like AM378_12915 f2eee04808de5473aea8f85f5f5ba163 233 TIGRFAM TIGR03420 DnaA_homol_Hda: DnaA regulatory inactivator Hda 6 231 2.0E-83 T 15-10-2018 IPR017788 DnaA regulatory inactivator Hda GO:0032297 AM378_12915 f2eee04808de5473aea8f85f5f5ba163 233 Hamap MF_01158 DnaA regulatory inactivator Hda [hda]. 5 233 58.927 T 15-10-2018 IPR022864 DnaA regulatory inactivator Hda, Enterobacteriaceae AM378_18440 ed27b35c75807eeee2e44be7fba18d62 405 Gene3D G3DSA:3.40.50.12020 1 178 2.6E-52 T 15-10-2018 AM378_18440 ed27b35c75807eeee2e44be7fba18d62 405 PIRSF PIRSF033271 4 404 1.6E-168 T 15-10-2018 IPR008322 Uncharacterised protein family UPF0261 AM378_18440 ed27b35c75807eeee2e44be7fba18d62 405 Pfam PF06792 Uncharacterised protein family (UPF0261) 8 401 6.9E-149 T 15-10-2018 IPR008322 Uncharacterised protein family UPF0261 AM378_18440 ed27b35c75807eeee2e44be7fba18d62 405 Gene3D G3DSA:3.40.50.12030 185 403 3.5E-81 T 15-10-2018 AM378_21030 cb96e406635e6a9bf46856e0203c8a8f 627 Pfam PF01119 DNA mismatch repair protein, C-terminal domain 214 329 7.3E-38 T 15-10-2018 IPR013507 DNA mismatch repair protein, S5 domain 2-like GO:0005524|GO:0006298|GO:0030983 AM378_21030 cb96e406635e6a9bf46856e0203c8a8f 627 Gene3D G3DSA:3.30.565.10 1 216 4.0E-72 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AM378_21030 cb96e406635e6a9bf46856e0203c8a8f 627 Pfam PF08676 MutL C terminal dimerisation domain 447 574 2.2E-25 T 15-10-2018 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 AM378_21030 cb96e406635e6a9bf46856e0203c8a8f 627 SMART SM00853 450 585 2.1E-14 T 15-10-2018 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 AM378_21030 cb96e406635e6a9bf46856e0203c8a8f 627 Hamap MF_00149 DNA mismatch repair protein MutL [mutL]. 1 624 25.822 T 15-10-2018 IPR020667 DNA mismatch repair protein, MutL GO:0006298 AM378_21030 cb96e406635e6a9bf46856e0203c8a8f 627 SUPERFAMILY SSF54211 191 330 8.72E-36 T 15-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AM378_21030 cb96e406635e6a9bf46856e0203c8a8f 627 Gene3D G3DSA:3.30.1370.100 491 579 4.8E-66 T 15-10-2018 AM378_21030 cb96e406635e6a9bf46856e0203c8a8f 627 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 24 122 2.9E-12 T 15-10-2018 AM378_21030 cb96e406635e6a9bf46856e0203c8a8f 627 SMART SM01340 212 330 1.6E-54 T 15-10-2018 IPR013507 DNA mismatch repair protein, S5 domain 2-like GO:0005524|GO:0006298|GO:0030983 AM378_21030 cb96e406635e6a9bf46856e0203c8a8f 627 Gene3D G3DSA:2.30.42.20 447 623 4.8E-66 T 15-10-2018 AM378_21030 cb96e406635e6a9bf46856e0203c8a8f 627 SUPERFAMILY SSF118116 445 625 8.37E-44 T 15-10-2018 IPR037198 MutL, C-terminal domain superfamily AM378_21030 cb96e406635e6a9bf46856e0203c8a8f 627 TIGRFAM TIGR00585 mutl: DNA mismatch repair protein MutL 1 310 1.4E-100 T 15-10-2018 IPR002099 DNA mismatch repair protein family, N-terminal GO:0005524|GO:0006298|GO:0030983 AM378_21030 cb96e406635e6a9bf46856e0203c8a8f 627 SUPERFAMILY SSF55874 1 203 1.22E-56 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AM378_21030 cb96e406635e6a9bf46856e0203c8a8f 627 Gene3D G3DSA:3.30.230.10 217 329 5.3E-41 T 15-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AM378_21030 cb96e406635e6a9bf46856e0203c8a8f 627 ProSitePatterns PS00058 DNA mismatch repair proteins mutL / hexB / PMS1 signature. 93 99 - T 15-10-2018 IPR014762 DNA mismatch repair, conserved site AM378_13995 a23adc71dd202c59e1fea6bffbec4ee0 314 SMART SM00849 83 288 1.8E-20 T 15-10-2018 IPR001279 Metallo-beta-lactamase AM378_13995 a23adc71dd202c59e1fea6bffbec4ee0 314 Pfam PF00753 Metallo-beta-lactamase superfamily 81 264 5.8E-24 T 15-10-2018 IPR001279 Metallo-beta-lactamase AM378_13995 a23adc71dd202c59e1fea6bffbec4ee0 314 Gene3D G3DSA:3.60.15.10 22 313 2.4E-103 T 15-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AM378_13995 a23adc71dd202c59e1fea6bffbec4ee0 314 SUPERFAMILY SSF56281 22 309 1.7E-49 T 15-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AM378_18415 99076f873593e944aea2ef251a4e00f3 594 Pfam PF00072 Response regulator receiver domain 475 586 1.8E-17 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM378_18415 99076f873593e944aea2ef251a4e00f3 594 SUPERFAMILY SSF52172 472 590 4.98E-28 T 15-10-2018 IPR011006 CheY-like superfamily AM378_18415 99076f873593e944aea2ef251a4e00f3 594 PRINTS PR00344 Bacterial sensor protein C-terminal signature 436 449 2.5E-15 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM378_18415 99076f873593e944aea2ef251a4e00f3 594 PRINTS PR00344 Bacterial sensor protein C-terminal signature 395 405 2.5E-15 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM378_18415 99076f873593e944aea2ef251a4e00f3 594 PRINTS PR00344 Bacterial sensor protein C-terminal signature 412 430 2.5E-15 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM378_18415 99076f873593e944aea2ef251a4e00f3 594 PRINTS PR00344 Bacterial sensor protein C-terminal signature 377 391 2.5E-15 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM378_18415 99076f873593e944aea2ef251a4e00f3 594 SUPERFAMILY SSF47384 214 291 3.92E-10 T 15-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AM378_18415 99076f873593e944aea2ef251a4e00f3 594 SMART SM00388 226 291 8.7E-9 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM378_18415 99076f873593e944aea2ef251a4e00f3 594 SMART SM00387 337 452 2.4E-34 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AM378_18415 99076f873593e944aea2ef251a4e00f3 594 Gene3D G3DSA:3.40.50.2300 471 590 6.0E-28 T 15-10-2018 AM378_18415 99076f873593e944aea2ef251a4e00f3 594 Pfam PF00512 His Kinase A (phospho-acceptor) domain 227 291 4.3E-7 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM378_18415 99076f873593e944aea2ef251a4e00f3 594 SUPERFAMILY SSF55874 281 453 4.19E-43 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AM378_18415 99076f873593e944aea2ef251a4e00f3 594 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 338 451 2.6E-25 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AM378_18415 99076f873593e944aea2ef251a4e00f3 594 Gene3D G3DSA:1.10.287.130 203 289 1.4E-11 T 15-10-2018 AM378_18415 99076f873593e944aea2ef251a4e00f3 594 SMART SM00448 473 586 1.6E-22 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM378_18415 99076f873593e944aea2ef251a4e00f3 594 Gene3D G3DSA:3.30.565.10 290 457 1.7E-46 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AM378_06210 e7598df9d1b38576546323cce79e0710 495 SUPERFAMILY SSF103473 8 486 9.29E-68 T 15-10-2018 IPR036259 MFS transporter superfamily AM378_06210 e7598df9d1b38576546323cce79e0710 495 Gene3D G3DSA:1.20.1720.10 16 220 3.2E-55 T 15-10-2018 AM378_06210 e7598df9d1b38576546323cce79e0710 495 PRINTS PR01036 Tetracycline resistance protein TetB signature 139 163 1.3E-7 T 15-10-2018 AM378_06210 e7598df9d1b38576546323cce79e0710 495 PRINTS PR01036 Tetracycline resistance protein TetB signature 265 290 1.3E-7 T 15-10-2018 AM378_06210 e7598df9d1b38576546323cce79e0710 495 PRINTS PR01036 Tetracycline resistance protein TetB signature 398 417 1.3E-7 T 15-10-2018 AM378_06210 e7598df9d1b38576546323cce79e0710 495 PRINTS PR01036 Tetracycline resistance protein TetB signature 78 100 1.3E-7 T 15-10-2018 AM378_06210 e7598df9d1b38576546323cce79e0710 495 Pfam PF07690 Major Facilitator Superfamily 21 407 8.5E-53 T 15-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM378_06210 e7598df9d1b38576546323cce79e0710 495 Gene3D G3DSA:1.20.1250.20 264 484 3.1E-17 T 15-10-2018 AM378_22180 457b90f72b6f5b0bcee81ae38364ba0a 252 Gene3D G3DSA:1.10.10.10 11 85 3.1E-23 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_22180 457b90f72b6f5b0bcee81ae38364ba0a 252 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 34 48 1.4E-9 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM378_22180 457b90f72b6f5b0bcee81ae38364ba0a 252 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 48 64 1.4E-9 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM378_22180 457b90f72b6f5b0bcee81ae38364ba0a 252 Gene3D G3DSA:1.20.120.530 114 248 9.0E-26 T 15-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AM378_22180 457b90f72b6f5b0bcee81ae38364ba0a 252 Pfam PF07729 FCD domain 118 242 3.1E-23 T 15-10-2018 IPR011711 GntR, C-terminal AM378_22180 457b90f72b6f5b0bcee81ae38364ba0a 252 SUPERFAMILY SSF46785 6 78 9.54E-23 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM378_22180 457b90f72b6f5b0bcee81ae38364ba0a 252 Pfam PF00392 Bacterial regulatory proteins, gntR family 12 74 1.2E-20 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM378_22180 457b90f72b6f5b0bcee81ae38364ba0a 252 SUPERFAMILY SSF48008 117 247 6.02E-25 T 15-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AM378_22180 457b90f72b6f5b0bcee81ae38364ba0a 252 SMART SM00345 15 74 9.6E-22 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM378_22180 457b90f72b6f5b0bcee81ae38364ba0a 252 SMART SM00895 117 243 5.3E-23 T 15-10-2018 IPR011711 GntR, C-terminal AM378_01510 8a063023a7f97956aa06750ecf4fcc7d 309 SUPERFAMILY SSF56601 5 280 5.52E-59 T 15-10-2018 IPR012338 Beta-lactamase/transpeptidase-like AM378_01510 8a063023a7f97956aa06750ecf4fcc7d 309 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 36 264 3.2E-80 T 15-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 AM378_01510 8a063023a7f97956aa06750ecf4fcc7d 309 Gene3D G3DSA:3.40.710.10 18 307 1.9E-62 T 15-10-2018 AM378_01510 8a063023a7f97956aa06750ecf4fcc7d 309 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 69 80 2.6E-13 T 15-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 AM378_01510 8a063023a7f97956aa06750ecf4fcc7d 309 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 146 159 2.6E-13 T 15-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 AM378_01510 8a063023a7f97956aa06750ecf4fcc7d 309 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 119 136 2.6E-13 T 15-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 AM378_11960 8c332d792b9e10fa8fb5ae753faf5db0 302 Pfam PF01039 Carboxyl transferase domain 102 298 3.4E-17 T 15-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 AM378_11960 8c332d792b9e10fa8fb5ae753faf5db0 302 Gene3D G3DSA:3.90.226.10 25 286 7.6E-89 T 15-10-2018 AM378_11960 8c332d792b9e10fa8fb5ae753faf5db0 302 Hamap MF_01395 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic [accD]. 1 281 38.337 T 15-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 AM378_11960 8c332d792b9e10fa8fb5ae753faf5db0 302 TIGRFAM TIGR00515 accD: acetyl-CoA carboxylase, carboxyl transferase, beta subunit 1 284 1.2E-148 T 15-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 AM378_11960 8c332d792b9e10fa8fb5ae753faf5db0 302 SUPERFAMILY SSF52096 25 283 1.8E-88 T 15-10-2018 IPR029045 ClpP/crotonase-like domain superfamily AM378_11960 8c332d792b9e10fa8fb5ae753faf5db0 302 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 251 260 2.7E-36 T 15-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 AM378_11960 8c332d792b9e10fa8fb5ae753faf5db0 302 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 200 217 2.7E-36 T 15-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 AM378_11960 8c332d792b9e10fa8fb5ae753faf5db0 302 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 129 143 2.7E-36 T 15-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 AM378_11960 8c332d792b9e10fa8fb5ae753faf5db0 302 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 229 240 2.7E-36 T 15-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 AM378_11960 8c332d792b9e10fa8fb5ae753faf5db0 302 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 163 181 2.7E-36 T 15-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 AM378_15685 497da983ae837225c87bdbffe18aad6c 218 Gene3D G3DSA:2.60.40.1090 71 218 6.6E-25 T 15-10-2018 IPR036937 Fimbrial-type adhesion domain superfamily GO:0007155|GO:0009289 AM378_15685 497da983ae837225c87bdbffe18aad6c 218 SUPERFAMILY SSF49401 60 218 7.95E-26 T 15-10-2018 IPR008966 Adhesion domain superfamily AM378_07495 0798cc3dc190686bb63525a848966b2c 260 Pfam PF05013 N-formylglutamate amidohydrolase 27 234 3.0E-40 T 15-10-2018 IPR007709 N-formylglutamate amidohydrolase AM378_07495 0798cc3dc190686bb63525a848966b2c 260 SUPERFAMILY SSF53187 11 256 2.17E-73 T 15-10-2018 AM378_07495 0798cc3dc190686bb63525a848966b2c 260 Gene3D G3DSA:3.40.630.40 17 259 1.2E-80 T 15-10-2018 AM378_07495 0798cc3dc190686bb63525a848966b2c 260 PIRSF PIRSF029730 6 259 3.1E-89 T 15-10-2018 IPR011227 Uncharacterised conserved protein UCP029730 AM378_10325 8b1d3a05aaf09f727ce3cbc85fc359d4 95 PIRSF PIRSF030200 1 95 1.5E-41 T 15-10-2018 IPR009359 Phenylacetic acid degradation B AM378_10325 8b1d3a05aaf09f727ce3cbc85fc359d4 95 Pfam PF06243 Phenylacetic acid degradation B 5 91 3.1E-39 T 15-10-2018 IPR009359 Phenylacetic acid degradation B AM378_10325 8b1d3a05aaf09f727ce3cbc85fc359d4 95 Gene3D G3DSA:3.10.20.520 1 65 4.0E-30 T 15-10-2018 IPR038693 Phenylacetyl-CoA epoxidase, subunit B AM378_10325 8b1d3a05aaf09f727ce3cbc85fc359d4 95 TIGRFAM TIGR02157 PA_CoA_Oxy2: phenylacetate-CoA oxygenase, PaaH subunit 6 95 4.0E-46 T 15-10-2018 IPR009359 Phenylacetic acid degradation B AM378_19435 0798e1bcb1805dc0e7e394a50bc26d3c 361 Gene3D G3DSA:1.20.1050.90 120 297 8.4E-80 T 15-10-2018 AM378_19435 0798e1bcb1805dc0e7e394a50bc26d3c 361 SUPERFAMILY SSF52540 1 341 4.24E-39 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_19435 0798e1bcb1805dc0e7e394a50bc26d3c 361 ProSitePatterns PS00618 RecF protein signature 2. 298 316 - T 15-10-2018 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 AM378_19435 0798e1bcb1805dc0e7e394a50bc26d3c 361 Gene3D G3DSA:3.40.50.300 8 331 8.4E-80 T 15-10-2018 AM378_19435 0798e1bcb1805dc0e7e394a50bc26d3c 361 TIGRFAM TIGR00611 recf: DNA replication and repair protein RecF 1 355 2.1E-134 T 15-10-2018 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 AM378_19435 0798e1bcb1805dc0e7e394a50bc26d3c 361 Hamap MF_00365 DNA replication and repair protein RecF [recF]. 1 361 100.713 T 15-10-2018 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 AM378_19435 0798e1bcb1805dc0e7e394a50bc26d3c 361 ProSitePatterns PS00617 RecF protein signature 1. 117 137 - T 15-10-2018 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 AM378_19435 0798e1bcb1805dc0e7e394a50bc26d3c 361 Pfam PF02463 RecF/RecN/SMC N terminal domain 3 351 5.3E-39 T 15-10-2018 IPR003395 RecF/RecN/SMC, N-terminal AM378_18405 80f56d119d0e01d1e987234285851156 450 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 39 49 - T 15-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 AM378_18405 80f56d119d0e01d1e987234285851156 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 169 194 4.7E-65 T 15-10-2018 AM378_18405 80f56d119d0e01d1e987234285851156 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 335 356 4.7E-65 T 15-10-2018 AM378_18405 80f56d119d0e01d1e987234285851156 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 255 269 4.7E-65 T 15-10-2018 AM378_18405 80f56d119d0e01d1e987234285851156 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 298 305 4.7E-65 T 15-10-2018 AM378_18405 80f56d119d0e01d1e987234285851156 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 135 144 4.7E-65 T 15-10-2018 AM378_18405 80f56d119d0e01d1e987234285851156 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 424 444 4.7E-65 T 15-10-2018 AM378_18405 80f56d119d0e01d1e987234285851156 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 402 417 4.7E-65 T 15-10-2018 AM378_18405 80f56d119d0e01d1e987234285851156 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 4.7E-65 T 15-10-2018 AM378_18405 80f56d119d0e01d1e987234285851156 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 38 53 4.7E-65 T 15-10-2018 AM378_18405 80f56d119d0e01d1e987234285851156 450 SUPERFAMILY SSF51905 1 359 1.58E-54 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AM378_18405 80f56d119d0e01d1e987234285851156 450 TIGRFAM TIGR01421 gluta_reduc_1: glutathione-disulfide reductase 3 450 1.2E-219 T 15-10-2018 IPR006322 Glutathione reductase, eukaryote/bacterial GO:0004362|GO:0006749|GO:0050660|GO:0050661|GO:0055114 KEGG: 00480+1.8.1.7|MetaCyc: PWY-4081|Reactome: R-HSA-2408550|Reactome: R-HSA-3299685|Reactome: R-HSA-499943|Reactome: R-HSA-5628897 AM378_18405 80f56d119d0e01d1e987234285851156 450 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 6 318 1.2E-67 T 15-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM378_18405 80f56d119d0e01d1e987234285851156 450 Gene3D G3DSA:3.30.390.30 338 450 2.3E-47 T 15-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 AM378_18405 80f56d119d0e01d1e987234285851156 450 Gene3D G3DSA:3.50.50.60 5 318 1.9E-123 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AM378_18405 80f56d119d0e01d1e987234285851156 450 SUPERFAMILY SSF55424 336 450 3.95E-35 T 15-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 AM378_18405 80f56d119d0e01d1e987234285851156 450 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 1.7E-28 T 15-10-2018 AM378_18405 80f56d119d0e01d1e987234285851156 450 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 132 150 1.7E-28 T 15-10-2018 AM378_18405 80f56d119d0e01d1e987234285851156 450 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 283 305 1.7E-28 T 15-10-2018 AM378_18405 80f56d119d0e01d1e987234285851156 450 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 254 270 1.7E-28 T 15-10-2018 AM378_18405 80f56d119d0e01d1e987234285851156 450 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 169 187 1.7E-28 T 15-10-2018 AM378_18405 80f56d119d0e01d1e987234285851156 450 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 339 449 3.5E-34 T 15-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 AM378_18405 80f56d119d0e01d1e987234285851156 450 PIRSF PIRSF000350 1 447 8.7E-84 T 15-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 AM378_18405 80f56d119d0e01d1e987234285851156 450 Gene3D G3DSA:3.50.50.60 144 261 1.9E-123 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AM378_18675 2eaddf25d94e68afeebe9fb22a1aa1fe 878 Pfam PF00311 Phosphoenolpyruvate carboxylase 127 878 5.9E-292 T 15-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 AM378_18675 2eaddf25d94e68afeebe9fb22a1aa1fe 878 ProSitePatterns PS00781 Phosphoenolpyruvate carboxylase active site 1. 133 144 - T 15-10-2018 IPR018129 Phosphoenolpyruvate carboxylase, Lys active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 AM378_18675 2eaddf25d94e68afeebe9fb22a1aa1fe 878 Hamap MF_00595 Phosphoenolpyruvate carboxylase [ppc]. 1 878 18.363 T 15-10-2018 IPR022805 Phosphoenolpyruvate carboxylase, bacterial/plant-type GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 AM378_18675 2eaddf25d94e68afeebe9fb22a1aa1fe 878 Gene3D G3DSA:1.20.1440.90 303 388 7.9E-23 T 15-10-2018 AM378_18675 2eaddf25d94e68afeebe9fb22a1aa1fe 878 SUPERFAMILY SSF51621 6 878 0.0 T 15-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 AM378_18675 2eaddf25d94e68afeebe9fb22a1aa1fe 878 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 244 259 5.7E-68 T 15-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 AM378_18675 2eaddf25d94e68afeebe9fb22a1aa1fe 878 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 534 554 5.7E-68 T 15-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 AM378_18675 2eaddf25d94e68afeebe9fb22a1aa1fe 878 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 132 145 5.7E-68 T 15-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 AM378_18675 2eaddf25d94e68afeebe9fb22a1aa1fe 878 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 185 201 5.7E-68 T 15-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 AM378_18675 2eaddf25d94e68afeebe9fb22a1aa1fe 878 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 385 405 5.7E-68 T 15-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 AM378_18675 2eaddf25d94e68afeebe9fb22a1aa1fe 878 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 708 734 5.7E-68 T 15-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 AM378_18675 2eaddf25d94e68afeebe9fb22a1aa1fe 878 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 576 605 5.7E-68 T 15-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 AM378_18675 2eaddf25d94e68afeebe9fb22a1aa1fe 878 ProSitePatterns PS00393 Phosphoenolpyruvate carboxylase active site 2. 536 548 - T 15-10-2018 IPR033129 Phosphoenolpyruvate carboxylase, His active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 AM378_02405 15dfb9ce5e6fdad921588903306039a6 679 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 19 503 3.7E-176 T 15-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 AM378_02405 15dfb9ce5e6fdad921588903306039a6 679 ProSitePatterns PS01303 BCCT family of transporters signature. 320 329 - T 15-10-2018 IPR018093 BCCT transporter, conserved site AM378_02405 15dfb9ce5e6fdad921588903306039a6 679 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 57 504 1.1E-175 T 15-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 AM378_06750 c38073e8c1cd67bb651dc37bad8510c6 338 SMART SM00829 7 332 5.3E-6 T 15-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AM378_06750 c38073e8c1cd67bb651dc37bad8510c6 338 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 57 71 - T 15-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 AM378_06750 c38073e8c1cd67bb651dc37bad8510c6 338 Gene3D G3DSA:3.40.50.720 146 283 1.1E-120 T 15-10-2018 AM378_06750 c38073e8c1cd67bb651dc37bad8510c6 338 Pfam PF00107 Zinc-binding dehydrogenase 172 298 1.1E-27 T 15-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AM378_06750 c38073e8c1cd67bb651dc37bad8510c6 338 SUPERFAMILY SSF50129 1 169 5.63E-45 T 15-10-2018 IPR011032 GroES-like superfamily AM378_06750 c38073e8c1cd67bb651dc37bad8510c6 338 SUPERFAMILY SSF51735 135 302 1.05E-38 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily AM378_06750 c38073e8c1cd67bb651dc37bad8510c6 338 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 25 131 2.2E-27 T 15-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AM378_06750 c38073e8c1cd67bb651dc37bad8510c6 338 Gene3D G3DSA:3.90.180.10 25 331 1.1E-120 T 15-10-2018 AM378_04440 d2a358ca590feaf633fa27419912b8c4 339 Hamap MF_00364 Beta-hexosaminidase [nagZ]. 1 328 48.123 T 15-10-2018 IPR022956 Beta-hexosaminidase, bacterial GO:0004563 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 AM378_04440 d2a358ca590feaf633fa27419912b8c4 339 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 7 313 4.3E-98 T 15-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 AM378_04440 d2a358ca590feaf633fa27419912b8c4 339 Gene3D G3DSA:3.20.20.300 1 339 6.9E-135 T 15-10-2018 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily GO:0004553|GO:0005975 AM378_04440 d2a358ca590feaf633fa27419912b8c4 339 SUPERFAMILY SSF51445 1 315 4.95E-85 T 15-10-2018 IPR017853 Glycoside hydrolase superfamily AM378_04440 d2a358ca590feaf633fa27419912b8c4 339 ProSitePatterns PS00775 Glycosyl hydrolases family 3 active site. 230 247 - T 15-10-2018 IPR019800 Glycoside hydrolase, family 3, active site GO:0004553|GO:0005975 AM378_03805 dcdf625f2b6ce1c0b4db7c3f0453e866 265 Gene3D G3DSA:1.10.10.10 8 104 1.6E-11 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_03805 dcdf625f2b6ce1c0b4db7c3f0453e866 265 Pfam PF00486 Transcriptional regulatory protein, C terminal 28 102 2.6E-9 T 15-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AM378_03805 dcdf625f2b6ce1c0b4db7c3f0453e866 265 SMART SM00862 25 102 2.8E-8 T 15-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AM378_03805 dcdf625f2b6ce1c0b4db7c3f0453e866 265 SUPERFAMILY SSF46894 18 102 3.4E-11 T 15-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AM378_01230 28d7f7eaa46ff7af42f0f0c682a7ee89 495 Gene3D G3DSA:3.40.50.300 8 231 4.6E-37 T 15-10-2018 AM378_01230 28d7f7eaa46ff7af42f0f0c682a7ee89 495 SMART SM00382 28 227 1.1E-7 T 15-10-2018 IPR003593 AAA+ ATPase domain AM378_01230 28d7f7eaa46ff7af42f0f0c682a7ee89 495 SMART SM00382 285 479 4.6E-8 T 15-10-2018 IPR003593 AAA+ ATPase domain AM378_01230 28d7f7eaa46ff7af42f0f0c682a7ee89 495 Gene3D G3DSA:3.40.50.300 245 480 1.0E-49 T 15-10-2018 AM378_01230 28d7f7eaa46ff7af42f0f0c682a7ee89 495 SUPERFAMILY SSF52540 251 479 5.21E-41 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_01230 28d7f7eaa46ff7af42f0f0c682a7ee89 495 SUPERFAMILY SSF52540 8 225 1.35E-35 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_01230 28d7f7eaa46ff7af42f0f0c682a7ee89 495 Pfam PF00005 ABC transporter 276 429 8.1E-25 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM378_01230 28d7f7eaa46ff7af42f0f0c682a7ee89 495 Pfam PF00005 ABC transporter 24 163 1.3E-17 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM378_14895 001e5d30fd737b892c39f31ee6cb5f80 330 PIRSF PIRSF006487 20 325 1.5E-8 T 15-10-2018 IPR028896 Aminomethyltransferase-like KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 AM378_14895 001e5d30fd737b892c39f31ee6cb5f80 330 Pfam PF01571 Aminomethyltransferase folate-binding domain 32 139 2.4E-7 T 15-10-2018 IPR006222 Aminomethyltransferase, folate-binding domain AM378_14895 001e5d30fd737b892c39f31ee6cb5f80 330 Hamap MF_01175 tRNA-modifying protein YgfZ [ygfZ]. 1 323 49.609 T 15-10-2018 IPR023758 tRNA-modifying protein YgfZ GO:0005542|GO:0009451 AM378_14895 001e5d30fd737b892c39f31ee6cb5f80 330 TIGRFAM TIGR03317 ygfZ_signature: folate-binding protein YgfZ 189 253 3.8E-25 T 15-10-2018 IPR017703 YgfZ/GcvT conserved site AM378_14895 001e5d30fd737b892c39f31ee6cb5f80 330 SUPERFAMILY SSF103025 12 243 7.85E-62 T 15-10-2018 AM378_14895 001e5d30fd737b892c39f31ee6cb5f80 330 Gene3D G3DSA:3.30.70.1400 28 114 1.4E-59 T 15-10-2018 AM378_14895 001e5d30fd737b892c39f31ee6cb5f80 330 Gene3D G3DSA:2.40.30.160 198 320 7.1E-43 T 15-10-2018 AM378_14895 001e5d30fd737b892c39f31ee6cb5f80 330 Gene3D G3DSA:3.30.70.1630 25 195 1.4E-59 T 15-10-2018 AM378_14895 001e5d30fd737b892c39f31ee6cb5f80 330 SUPERFAMILY SSF101790 245 326 1.11E-23 T 15-10-2018 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal AM378_13105 0015e522a18a2c84f38e8d813c1faaa0 129 Hamap MF_00265 tRNA(fMet)-specific endonuclease VapC [vapC]. 2 126 10.881 T 15-10-2018 IPR022907 VapC family GO:0004540 AM378_13105 0015e522a18a2c84f38e8d813c1faaa0 129 Pfam PF01850 PIN domain 2 119 1.4E-14 T 15-10-2018 IPR002716 PIN domain AM378_13105 0015e522a18a2c84f38e8d813c1faaa0 129 SUPERFAMILY SSF88723 1 128 1.74E-34 T 15-10-2018 IPR029060 PIN-like domain superfamily AM378_13105 0015e522a18a2c84f38e8d813c1faaa0 129 Gene3D G3DSA:3.40.50.1010 1 128 2.2E-34 T 15-10-2018 AM378_13195 8000366caa217739ec7ae8048cf75c17 226 SUPERFAMILY SSF53335 10 209 2.59E-25 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM378_13195 8000366caa217739ec7ae8048cf75c17 226 Pfam PF13649 Methyltransferase domain 52 144 3.3E-10 T 15-10-2018 AM378_13195 8000366caa217739ec7ae8048cf75c17 226 Gene3D G3DSA:3.40.50.150 8 221 6.5E-29 T 15-10-2018 AM378_20840 fc820b15f1b79c0dca0cc7ae7383561a 401 SUPERFAMILY SSF56322 32 398 5.1E-92 T 15-10-2018 IPR005801 ADC synthase GO:0009058 AM378_20840 fc820b15f1b79c0dca0cc7ae7383561a 401 Pfam PF00425 chorismate binding enzyme 134 388 1.3E-73 T 15-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal AM378_20840 fc820b15f1b79c0dca0cc7ae7383561a 401 Gene3D G3DSA:3.60.120.10 12 399 1.9E-130 T 15-10-2018 IPR005801 ADC synthase GO:0009058 AM378_20840 fc820b15f1b79c0dca0cc7ae7383561a 401 TIGRFAM TIGR00543 isochor_syn: isochorismate synthase 132 395 1.8E-89 T 15-10-2018 IPR004561 Isochorismate synthase GO:0008909|GO:0009058 KEGG: 00130+5.4.4.2|MetaCyc: PWY-5837|MetaCyc: PWY-5901|MetaCyc: PWY-6406 AM378_18145 7f5737442c2f96ecea505b3ec92b3b0f 273 TIGRFAM TIGR04378 myo_inos_iolB: 5-deoxy-glucuronate isomerase 18 264 2.8E-101 T 15-10-2018 IPR024203 5-deoxy-glucuronate isomerase, IolB GO:0008880|GO:0019310 KEGG: 00562+5.3.1.30 AM378_18145 7f5737442c2f96ecea505b3ec92b3b0f 273 PIRSF PIRSF036628 1 269 8.4E-110 T 15-10-2018 IPR024203 5-deoxy-glucuronate isomerase, IolB GO:0008880|GO:0019310 KEGG: 00562+5.3.1.30 AM378_18145 7f5737442c2f96ecea505b3ec92b3b0f 273 SUPERFAMILY SSF51182 17 253 1.25E-68 T 15-10-2018 IPR011051 RmlC-like cupin domain superfamily AM378_18145 7f5737442c2f96ecea505b3ec92b3b0f 273 Gene3D G3DSA:2.60.120.10 15 123 5.1E-39 T 15-10-2018 IPR014710 RmlC-like jelly roll fold AM378_18145 7f5737442c2f96ecea505b3ec92b3b0f 273 Pfam PF04962 KduI/IolB family 5 264 1.5E-110 T 15-10-2018 IPR021120 KduI/IolB isomerase GO:0016861 KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507 AM378_18145 7f5737442c2f96ecea505b3ec92b3b0f 273 Gene3D G3DSA:2.60.120.10 124 271 5.4E-61 T 15-10-2018 IPR014710 RmlC-like jelly roll fold AM378_00410 cce8f905aa3b69817c45e138191f402c 271 SMART SM00346 20 110 9.0E-30 T 15-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 AM378_00410 cce8f905aa3b69817c45e138191f402c 271 Gene3D G3DSA:3.30.450.40 93 268 1.3E-58 T 15-10-2018 IPR029016 GAF-like domain superfamily AM378_00410 cce8f905aa3b69817c45e138191f402c 271 Pfam PF09339 IclR helix-turn-helix domain 22 73 6.1E-12 T 15-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 AM378_00410 cce8f905aa3b69817c45e138191f402c 271 Gene3D G3DSA:1.10.10.10 18 92 4.9E-16 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_00410 cce8f905aa3b69817c45e138191f402c 271 SUPERFAMILY SSF55781 85 265 7.19E-48 T 15-10-2018 AM378_00410 cce8f905aa3b69817c45e138191f402c 271 SUPERFAMILY SSF46785 21 93 1.41E-13 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM378_00410 cce8f905aa3b69817c45e138191f402c 271 Pfam PF01614 Bacterial transcriptional regulator 140 262 3.1E-36 T 15-10-2018 IPR014757 Transcription regulator IclR, C-terminal AM378_23015 3215355a53c626411bc3c7c7405d5b63 431 Pfam PF03952 Enolase, N-terminal domain 4 134 2.5E-58 T 15-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AM378_23015 3215355a53c626411bc3c7c7405d5b63 431 PIRSF PIRSF001400 1 429 2.8E-191 T 15-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AM378_23015 3215355a53c626411bc3c7c7405d5b63 431 SMART SM01192 143 430 8.5E-212 T 15-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AM378_23015 3215355a53c626411bc3c7c7405d5b63 431 Gene3D G3DSA:3.20.20.120 128 431 7.6E-137 T 15-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily AM378_23015 3215355a53c626411bc3c7c7405d5b63 431 TIGRFAM TIGR01060 eno: phosphopyruvate hydratase 4 428 4.4E-205 T 15-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AM378_23015 3215355a53c626411bc3c7c7405d5b63 431 SUPERFAMILY SSF51604 143 427 4.1E-127 T 15-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily AM378_23015 3215355a53c626411bc3c7c7405d5b63 431 ProSitePatterns PS00164 Enolase signature. 339 352 - T 15-10-2018 IPR020809 Enolase, conserved site KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM378_23015 3215355a53c626411bc3c7c7405d5b63 431 Pfam PF00113 Enolase, C-terminal TIM barrel domain 144 429 7.4E-140 T 15-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AM378_23015 3215355a53c626411bc3c7c7405d5b63 431 Gene3D G3DSA:3.30.390.10 3 127 1.1E-54 T 15-10-2018 IPR029017 Enolase-like, N-terminal AM378_23015 3215355a53c626411bc3c7c7405d5b63 431 Hamap MF_00318 Enolase [eno]. 2 416 44.146 T 15-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AM378_23015 3215355a53c626411bc3c7c7405d5b63 431 SMART SM01193 4 134 1.7E-93 T 15-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AM378_23015 3215355a53c626411bc3c7c7405d5b63 431 PRINTS PR00148 Enolase signature 107 123 1.2E-44 T 15-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AM378_23015 3215355a53c626411bc3c7c7405d5b63 431 PRINTS PR00148 Enolase signature 37 51 1.2E-44 T 15-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AM378_23015 3215355a53c626411bc3c7c7405d5b63 431 PRINTS PR00148 Enolase signature 165 178 1.2E-44 T 15-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AM378_23015 3215355a53c626411bc3c7c7405d5b63 431 PRINTS PR00148 Enolase signature 368 385 1.2E-44 T 15-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AM378_23015 3215355a53c626411bc3c7c7405d5b63 431 PRINTS PR00148 Enolase signature 316 327 1.2E-44 T 15-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AM378_23015 3215355a53c626411bc3c7c7405d5b63 431 PRINTS PR00148 Enolase signature 339 353 1.2E-44 T 15-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AM378_23015 3215355a53c626411bc3c7c7405d5b63 431 SUPERFAMILY SSF54826 3 138 3.34E-56 T 15-10-2018 AM378_13290 6ea99aa36ad1415398f24989c2711919 341 SUPERFAMILY SSF55486 62 340 3.48E-86 T 15-10-2018 AM378_13290 6ea99aa36ad1415398f24989c2711919 341 Pfam PF01447 Thermolysin metallopeptidase, catalytic domain 62 170 4.6E-31 T 15-10-2018 IPR013856 Peptidase M4 domain GO:0004222 AM378_13290 6ea99aa36ad1415398f24989c2711919 341 Gene3D G3DSA:1.10.390.10 175 341 1.3E-71 T 15-10-2018 IPR027268 Peptidase M4/M1, CTD superfamily AM378_13290 6ea99aa36ad1415398f24989c2711919 341 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 125 145 4.6E-29 T 15-10-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 AM378_13290 6ea99aa36ad1415398f24989c2711919 341 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 161 177 4.6E-29 T 15-10-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 AM378_13290 6ea99aa36ad1415398f24989c2711919 341 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 182 193 4.6E-29 T 15-10-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 AM378_13290 6ea99aa36ad1415398f24989c2711919 341 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 263 279 4.6E-29 T 15-10-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 AM378_13290 6ea99aa36ad1415398f24989c2711919 341 Pfam PF16485 Protealysin propeptide 7 46 1.5E-18 T 15-10-2018 IPR032475 Protealysin, N-terminal propeptide AM378_13290 6ea99aa36ad1415398f24989c2711919 341 Pfam PF02868 Thermolysin metallopeptidase, alpha-helical domain 173 340 9.3E-51 T 15-10-2018 IPR001570 Peptidase M4, C-terminal GO:0004222 AM378_13290 6ea99aa36ad1415398f24989c2711919 341 Gene3D G3DSA:3.10.170.10 1 174 1.3E-73 T 15-10-2018 AM378_12215 29ca63cdfc717a28237b456667c3d065 210 Gene3D G3DSA:3.40.50.300 1 203 1.3E-43 T 15-10-2018 AM378_12215 29ca63cdfc717a28237b456667c3d065 210 Pfam PF00005 ABC transporter 18 157 2.3E-27 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM378_12215 29ca63cdfc717a28237b456667c3d065 210 SUPERFAMILY SSF52540 2 188 1.91E-42 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_12215 29ca63cdfc717a28237b456667c3d065 210 ProSitePatterns PS00211 ABC transporters family signature. 130 144 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM378_12215 29ca63cdfc717a28237b456667c3d065 210 SMART SM00382 26 201 8.5E-5 T 15-10-2018 IPR003593 AAA+ ATPase domain AM378_12215 29ca63cdfc717a28237b456667c3d065 210 TIGRFAM TIGR01189 ccmA: heme ABC exporter, ATP-binding protein CcmA 2 193 1.2E-80 T 15-10-2018 IPR005895 ABC transporter, haem export, CcmA GO:0005215|GO:0017004 AM378_11505 f849b6edeb117c38621a747797fccc6c 214 Pfam PF13417 Glutathione S-transferase, N-terminal domain 3 79 4.2E-14 T 15-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AM378_11505 f849b6edeb117c38621a747797fccc6c 214 Pfam PF13410 Glutathione S-transferase, C-terminal domain 135 193 5.9E-8 T 15-10-2018 AM378_11505 f849b6edeb117c38621a747797fccc6c 214 Gene3D G3DSA:3.40.30.10 1 87 6.2E-22 T 15-10-2018 AM378_11505 f849b6edeb117c38621a747797fccc6c 214 TIGRFAM TIGR01262 maiA: maleylacetoacetate isomerase 2 211 1.8E-86 T 15-10-2018 IPR005955 Glutathione S-transferases, class Zeta GO:0003824|GO:0005737|GO:0009072 Reactome: R-HSA-156590|Reactome: R-HSA-204174|Reactome: R-HSA-71182 AM378_11505 f849b6edeb117c38621a747797fccc6c 214 Gene3D G3DSA:1.20.1050.10 88 213 7.7E-49 T 15-10-2018 AM378_11505 f849b6edeb117c38621a747797fccc6c 214 SUPERFAMILY SSF52833 1 88 3.99E-21 T 15-10-2018 IPR036249 Thioredoxin-like superfamily AM378_11505 f849b6edeb117c38621a747797fccc6c 214 SUPERFAMILY SSF47616 81 211 1.14E-31 T 15-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily AM378_16590 c705fc9d042c81aeab3338d69ad29c6a 419 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 6 406 3.3E-127 T 15-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 AM378_16590 c705fc9d042c81aeab3338d69ad29c6a 419 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 1 416 44.637 T 15-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 AM378_16590 c705fc9d042c81aeab3338d69ad29c6a 419 Gene3D G3DSA:3.65.10.10 7 413 3.3E-175 T 15-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 AM378_16590 c705fc9d042c81aeab3338d69ad29c6a 419 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 415 4.1E-186 T 15-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 AM378_16590 c705fc9d042c81aeab3338d69ad29c6a 419 Gene3D G3DSA:3.65.10.10 21 228 3.3E-175 T 15-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 AM378_16590 c705fc9d042c81aeab3338d69ad29c6a 419 SUPERFAMILY SSF55205 1 418 1.03E-147 T 15-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 AM378_08840 e89cf5eb03ca9aa4c5a897477f7bb407 81 Hamap MF_00507 UPF0181 protein YoaH [yoaH]. 1 57 17.575 T 15-10-2018 IPR005371 Uncharacterised protein family UPF0181 AM378_08840 e89cf5eb03ca9aa4c5a897477f7bb407 81 Pfam PF03701 Uncharacterised protein family (UPF0181) 1 49 1.2E-22 T 15-10-2018 IPR005371 Uncharacterised protein family UPF0181 AM378_08840 e89cf5eb03ca9aa4c5a897477f7bb407 81 ProDom PD026807 UPF0181 YOAH YPTB1650 VV20310 VPA0916 VCA0569 YPO1774/Y2534/YP1619 PLU2693 VVA0806 PM0480 1 46 6.0E-12 T 15-10-2018 IPR005371 Uncharacterised protein family UPF0181 AM378_20275 e88f6e32734e627713b73a871127f9c9 125 ProDom PD015804 INHIBITOR PROTEASE METALLOPROTEASE PROTEINASE PRECURSOR SIGNAL PERIPLASMIC METALLOENZYME ALKALINE PRTA-SPECIFIC 34 120 2.0E-38 T 15-10-2018 IPR003086 Metalloprotease inhibitor I38 GO:0004866|GO:0030288 AM378_20275 e88f6e32734e627713b73a871127f9c9 125 SUPERFAMILY SSF50882 25 122 1.44E-24 T 15-10-2018 IPR016085 Protease inhibitor, beta-barrel domain GO:0004866 AM378_20275 e88f6e32734e627713b73a871127f9c9 125 PRINTS PR01274 Metalloprotease inhibitor signature 103 116 3.8E-11 T 15-10-2018 IPR022815 Protease inhibitor I38 AM378_20275 e88f6e32734e627713b73a871127f9c9 125 PRINTS PR01274 Metalloprotease inhibitor signature 86 99 3.8E-11 T 15-10-2018 IPR022815 Protease inhibitor I38 AM378_20275 e88f6e32734e627713b73a871127f9c9 125 PRINTS PR01274 Metalloprotease inhibitor signature 24 40 3.8E-11 T 15-10-2018 IPR022815 Protease inhibitor I38 AM378_20275 e88f6e32734e627713b73a871127f9c9 125 Gene3D G3DSA:2.40.128.10 24 125 4.8E-31 T 15-10-2018 AM378_20275 e88f6e32734e627713b73a871127f9c9 125 Pfam PF02974 Protease inhibitor Inh 29 116 1.6E-18 T 15-10-2018 IPR021140 Alkaline proteinase inhibitor/ Outer membrane lipoprotein Omp19 AM378_08040 db2cfaff88bf316e5baa09fddc58be65 865 Pfam PF01131 DNA topoisomerase 157 565 1.5E-127 T 15-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 AM378_08040 db2cfaff88bf316e5baa09fddc58be65 865 SUPERFAMILY SSF57783 809 864 2.55E-22 T 15-10-2018 AM378_08040 db2cfaff88bf316e5baa09fddc58be65 865 Gene3D G3DSA:1.10.290.10 280 404 3.4E-166 T 15-10-2018 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 AM378_08040 db2cfaff88bf316e5baa09fddc58be65 865 Gene3D G3DSA:3.40.50.140 1 163 3.5E-69 T 15-10-2018 AM378_08040 db2cfaff88bf316e5baa09fddc58be65 865 SMART SM00436 133 221 8.7E-48 T 15-10-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 AM378_08040 db2cfaff88bf316e5baa09fddc58be65 865 Gene3D G3DSA:1.10.460.10 165 571 3.4E-166 T 15-10-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 AM378_08040 db2cfaff88bf316e5baa09fddc58be65 865 TIGRFAM TIGR01051 topA_bact: DNA topoisomerase I 5 635 3.0E-259 T 15-10-2018 IPR005733 DNA topoisomerase I, bacterial-type GO:0003677|GO:0003917|GO:0006265 AM378_08040 db2cfaff88bf316e5baa09fddc58be65 865 Gene3D G3DSA:3.30.65.10 700 744 3.4E-5 T 15-10-2018 AM378_08040 db2cfaff88bf316e5baa09fddc58be65 865 Gene3D G3DSA:3.30.65.10 745 807 3.4E-32 T 15-10-2018 AM378_08040 db2cfaff88bf316e5baa09fddc58be65 865 SUPERFAMILY SSF57783 703 743 1.87E-6 T 15-10-2018 AM378_08040 db2cfaff88bf316e5baa09fddc58be65 865 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 597 622 7.4E-6 T 15-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 AM378_08040 db2cfaff88bf316e5baa09fddc58be65 865 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 708 745 5.1E-12 T 15-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 AM378_08040 db2cfaff88bf316e5baa09fddc58be65 865 SMART SM00493 3 132 5.1E-33 T 15-10-2018 IPR006171 TOPRIM domain AM378_08040 db2cfaff88bf316e5baa09fddc58be65 865 Gene3D G3DSA:2.20.25.10 808 865 2.7E-31 T 15-10-2018 AM378_08040 db2cfaff88bf316e5baa09fddc58be65 865 SMART SM00437 272 527 1.0E-121 T 15-10-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 AM378_08040 db2cfaff88bf316e5baa09fddc58be65 865 Hamap MF_00952 DNA topoisomerase 1 [topA]. 3 732 55.212 T 15-10-2018 IPR028612 DNA topoisomerase I, type IA GO:0003677|GO:0003916|GO:0006265 AM378_08040 db2cfaff88bf316e5baa09fddc58be65 865 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 314 323 5.9E-37 T 15-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 AM378_08040 db2cfaff88bf316e5baa09fddc58be65 865 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 106 119 5.9E-37 T 15-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 AM378_08040 db2cfaff88bf316e5baa09fddc58be65 865 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 490 504 5.9E-37 T 15-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 AM378_08040 db2cfaff88bf316e5baa09fddc58be65 865 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 390 406 5.9E-37 T 15-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 AM378_08040 db2cfaff88bf316e5baa09fddc58be65 865 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 191 209 5.9E-37 T 15-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 AM378_08040 db2cfaff88bf316e5baa09fddc58be65 865 SUPERFAMILY SSF56712 3 609 4.05E-204 T 15-10-2018 IPR023405 DNA topoisomerase, type IA, core domain AM378_08040 db2cfaff88bf316e5baa09fddc58be65 865 Pfam PF08272 Topoisomerase I zinc-ribbon-like 758 793 2.9E-12 T 15-10-2018 IPR013263 DNA topoisomerase I, zinc ribbon-like, bacterial-type GO:0003677|GO:0003917|GO:0006265 AM378_08040 db2cfaff88bf316e5baa09fddc58be65 865 Pfam PF08272 Topoisomerase I zinc-ribbon-like 824 862 4.8E-23 T 15-10-2018 IPR013263 DNA topoisomerase I, zinc ribbon-like, bacterial-type GO:0003677|GO:0003917|GO:0006265 AM378_08040 db2cfaff88bf316e5baa09fddc58be65 865 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 309 323 - T 15-10-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 AM378_08040 db2cfaff88bf316e5baa09fddc58be65 865 Gene3D G3DSA:2.70.20.10 213 473 3.4E-166 T 15-10-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 AM378_08040 db2cfaff88bf316e5baa09fddc58be65 865 Pfam PF01751 Toprim domain 5 142 2.5E-33 T 15-10-2018 IPR006171 TOPRIM domain AM378_08040 db2cfaff88bf316e5baa09fddc58be65 865 SUPERFAMILY SSF57783 744 807 3.4E-19 T 15-10-2018 AM378_02555 b3254deb8377224206aaab6fd2628372 625 Gene3D G3DSA:3.40.50.300 316 619 2.4E-86 T 15-10-2018 AM378_02555 b3254deb8377224206aaab6fd2628372 625 Gene3D G3DSA:3.40.50.300 19 300 2.1E-80 T 15-10-2018 AM378_02555 b3254deb8377224206aaab6fd2628372 625 Pfam PF00005 ABC transporter 42 205 1.7E-24 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM378_02555 b3254deb8377224206aaab6fd2628372 625 SUPERFAMILY SSF52540 319 568 9.37E-72 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_02555 b3254deb8377224206aaab6fd2628372 625 SUPERFAMILY SSF52540 21 277 1.25E-62 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_02555 b3254deb8377224206aaab6fd2628372 625 ProSitePatterns PS00211 ABC transporters family signature. 178 192 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM378_02555 b3254deb8377224206aaab6fd2628372 625 ProSitePatterns PS00211 ABC transporters family signature. 469 483 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM378_02555 b3254deb8377224206aaab6fd2628372 625 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 257 289 8.1E-4 T 15-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AM378_02555 b3254deb8377224206aaab6fd2628372 625 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 548 580 1.5E-8 T 15-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AM378_02555 b3254deb8377224206aaab6fd2628372 625 Pfam PF00005 ABC transporter 346 496 3.4E-32 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM378_02555 b3254deb8377224206aaab6fd2628372 625 SMART SM00382 354 546 3.2E-13 T 15-10-2018 IPR003593 AAA+ ATPase domain AM378_02555 b3254deb8377224206aaab6fd2628372 625 SMART SM00382 50 255 8.9E-17 T 15-10-2018 IPR003593 AAA+ ATPase domain AM378_16510 1cade22c005a01698a1ac442d0784e59 779 PRINTS PR00344 Bacterial sensor protein C-terminal signature 467 485 1.4E-14 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM378_16510 1cade22c005a01698a1ac442d0784e59 779 PRINTS PR00344 Bacterial sensor protein C-terminal signature 449 459 1.4E-14 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM378_16510 1cade22c005a01698a1ac442d0784e59 779 PRINTS PR00344 Bacterial sensor protein C-terminal signature 431 445 1.4E-14 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM378_16510 1cade22c005a01698a1ac442d0784e59 779 PRINTS PR00344 Bacterial sensor protein C-terminal signature 491 504 1.4E-14 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM378_16510 1cade22c005a01698a1ac442d0784e59 779 Pfam PF01627 Hpt domain 687 761 6.3E-13 T 15-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 AM378_16510 1cade22c005a01698a1ac442d0784e59 779 SUPERFAMILY SSF47226 662 775 1.44E-31 T 15-10-2018 IPR036641 HPT domain superfamily GO:0000160 AM378_16510 1cade22c005a01698a1ac442d0784e59 779 PIRSF PIRSF003182 1 779 0.0 T 15-10-2018 IPR014409 Signal transduction histidine kinase, hybrid-type, aerobic respiration control ArcB GO:0000155|GO:0000160|GO:0004673|GO:0016021 AM378_16510 1cade22c005a01698a1ac442d0784e59 779 SMART SM00387 394 507 3.1E-35 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AM378_16510 1cade22c005a01698a1ac442d0784e59 779 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 395 505 4.1E-30 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AM378_16510 1cade22c005a01698a1ac442d0784e59 779 Pfam PF00072 Response regulator receiver domain 528 639 6.3E-22 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM378_16510 1cade22c005a01698a1ac442d0784e59 779 Gene3D G3DSA:1.10.287.970 1 89 2.6E-39 T 15-10-2018 IPR027460 Aerobic respiration control sensor protein ArcB, transmembrane domain superfamily AM378_16510 1cade22c005a01698a1ac442d0784e59 779 SMART SM00091 155 221 4.6E-7 T 15-10-2018 IPR000014 PAS domain AM378_16510 1cade22c005a01698a1ac442d0784e59 779 SMART SM00448 526 639 7.8E-27 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM378_16510 1cade22c005a01698a1ac442d0784e59 779 Pfam PF00512 His Kinase A (phospho-acceptor) domain 283 345 3.4E-14 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM378_16510 1cade22c005a01698a1ac442d0784e59 779 SUPERFAMILY SSF47384 269 347 3.92E-17 T 15-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AM378_16510 1cade22c005a01698a1ac442d0784e59 779 Gene3D G3DSA:1.20.120.160 657 779 5.6E-32 T 15-10-2018 IPR036641 HPT domain superfamily GO:0000160 AM378_16510 1cade22c005a01698a1ac442d0784e59 779 Gene3D G3DSA:3.30.450.20 152 267 1.1E-18 T 15-10-2018 AM378_16510 1cade22c005a01698a1ac442d0784e59 779 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 153 276 5.1E-14 T 15-10-2018 IPR000014 PAS domain AM378_16510 1cade22c005a01698a1ac442d0784e59 779 SUPERFAMILY SSF55785 142 267 1.74E-20 T 15-10-2018 IPR035965 PAS domain superfamily AM378_16510 1cade22c005a01698a1ac442d0784e59 779 Gene3D G3DSA:3.30.565.10 348 509 4.4E-44 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AM378_16510 1cade22c005a01698a1ac442d0784e59 779 SUPERFAMILY SSF52172 526 663 2.13E-30 T 15-10-2018 IPR011006 CheY-like superfamily AM378_16510 1cade22c005a01698a1ac442d0784e59 779 SMART SM00388 282 347 3.0E-18 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM378_16510 1cade22c005a01698a1ac442d0784e59 779 Gene3D G3DSA:1.10.287.130 268 345 8.7E-22 T 15-10-2018 AM378_16510 1cade22c005a01698a1ac442d0784e59 779 Pfam PF00989 PAS fold 157 266 6.4E-18 T 15-10-2018 IPR013767 PAS fold GO:0006355 AM378_16510 1cade22c005a01698a1ac442d0784e59 779 Gene3D G3DSA:3.40.50.2300 510 650 7.0E-33 T 15-10-2018 AM378_16510 1cade22c005a01698a1ac442d0784e59 779 SMART SM00073 676 773 4.3E-18 T 15-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 AM378_16510 1cade22c005a01698a1ac442d0784e59 779 SUPERFAMILY SSF55874 336 503 2.1E-41 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AM378_06385 a7c5d9b8c4f2078e31d2135f298702bd 424 Gene3D G3DSA:1.10.287.470 98 249 1.7E-17 T 15-10-2018 AM378_06385 a7c5d9b8c4f2078e31d2135f298702bd 424 Gene3D G3DSA:2.40.30.170 52 344 1.7E-17 T 15-10-2018 AM378_06385 a7c5d9b8c4f2078e31d2135f298702bd 424 Pfam PF13437 HlyD family secretion protein 260 352 2.0E-13 T 15-10-2018 AM378_06385 a7c5d9b8c4f2078e31d2135f298702bd 424 SUPERFAMILY SSF111369 55 136 6.28E-5 T 15-10-2018 AM378_06385 a7c5d9b8c4f2078e31d2135f298702bd 424 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 305 329 2.1E-12 T 15-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AM378_06385 a7c5d9b8c4f2078e31d2135f298702bd 424 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 401 421 2.1E-12 T 15-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AM378_06385 a7c5d9b8c4f2078e31d2135f298702bd 424 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 271 292 2.1E-12 T 15-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AM378_06385 a7c5d9b8c4f2078e31d2135f298702bd 424 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 76 96 2.1E-12 T 15-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AM378_06385 a7c5d9b8c4f2078e31d2135f298702bd 424 ProSitePatterns PS00543 HlyD family secretion proteins signature. 386 408 - T 15-10-2018 IPR006144 Secretion protein HlyD, conserved site GO:0008565|GO:0009306|GO:0016020 AM378_06385 a7c5d9b8c4f2078e31d2135f298702bd 424 Gene3D G3DSA:2.40.50.100 64 295 1.7E-17 T 15-10-2018 AM378_18535 838a8ce452b7a6445671afc024bd8b55 548 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 187 321 5.0E-42 T 15-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 AM378_18535 838a8ce452b7a6445671afc024bd8b55 548 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 1 545 1.6E-214 T 15-10-2018 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 AM378_18535 838a8ce452b7a6445671afc024bd8b55 548 SUPERFAMILY SSF52518 355 546 1.49E-63 T 15-10-2018 IPR029061 Thiamin diphosphate-binding fold AM378_18535 838a8ce452b7a6445671afc024bd8b55 548 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 411 430 - T 15-10-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 AM378_18535 838a8ce452b7a6445671afc024bd8b55 548 Gene3D G3DSA:3.40.50.1220 180 347 1.1E-54 T 15-10-2018 AM378_18535 838a8ce452b7a6445671afc024bd8b55 548 Gene3D G3DSA:3.40.50.970 1 173 4.3E-68 T 15-10-2018 AM378_18535 838a8ce452b7a6445671afc024bd8b55 548 SUPERFAMILY SSF52467 183 341 7.89E-58 T 15-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily AM378_18535 838a8ce452b7a6445671afc024bd8b55 548 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 374 522 1.1E-48 T 15-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 AM378_18535 838a8ce452b7a6445671afc024bd8b55 548 Gene3D G3DSA:3.40.50.970 348 547 6.2E-65 T 15-10-2018 AM378_18535 838a8ce452b7a6445671afc024bd8b55 548 SUPERFAMILY SSF52518 1 175 8.84E-63 T 15-10-2018 IPR029061 Thiamin diphosphate-binding fold AM378_18535 838a8ce452b7a6445671afc024bd8b55 548 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 1 166 1.2E-56 T 15-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 AM378_06455 0534330c89d031b2b410526fc15873a3 487 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 246 253 - T 15-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 AM378_06455 0534330c89d031b2b410526fc15873a3 487 Pfam PF00171 Aldehyde dehydrogenase family 23 474 4.9E-154 T 15-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 AM378_06455 0534330c89d031b2b410526fc15873a3 487 Gene3D G3DSA:3.40.605.10 23 473 1.9E-156 T 15-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 AM378_06455 0534330c89d031b2b410526fc15873a3 487 Gene3D G3DSA:3.40.309.10 250 447 1.9E-156 T 15-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 AM378_06455 0534330c89d031b2b410526fc15873a3 487 SUPERFAMILY SSF53720 6 477 2.36E-146 T 15-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 AM378_10775 6a4fe1c0acd23415a7dcbf7157190dae 311 SUPERFAMILY SSF53850 95 305 8.51E-44 T 15-10-2018 AM378_10775 6a4fe1c0acd23415a7dcbf7157190dae 311 Gene3D G3DSA:1.10.10.10 9 91 2.6E-26 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_10775 6a4fe1c0acd23415a7dcbf7157190dae 311 Pfam PF03466 LysR substrate binding domain 94 298 4.7E-42 T 15-10-2018 IPR005119 LysR, substrate-binding AM378_10775 6a4fe1c0acd23415a7dcbf7157190dae 311 SUPERFAMILY SSF46785 12 87 7.1E-20 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM378_10775 6a4fe1c0acd23415a7dcbf7157190dae 311 Gene3D G3DSA:3.40.190.290 97 301 1.1E-62 T 15-10-2018 AM378_10775 6a4fe1c0acd23415a7dcbf7157190dae 311 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 13 69 5.5E-19 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_19630 f4f446d5f3b883ff89cee43de86223e2 206 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 168 175 - T 15-10-2018 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 AM378_19630 f4f446d5f3b883ff89cee43de86223e2 206 SUPERFAMILY SSF54719 95 204 2.88E-46 T 15-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 AM378_19630 f4f446d5f3b883ff89cee43de86223e2 206 Gene3D G3DSA:2.40.500.20 95 206 6.5E-51 T 15-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 AM378_19630 f4f446d5f3b883ff89cee43de86223e2 206 Gene3D G3DSA:1.10.287.990 20 90 1.9E-31 T 15-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 AM378_19630 f4f446d5f3b883ff89cee43de86223e2 206 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 2 90 3.4E-32 T 15-10-2018 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 AM378_19630 f4f446d5f3b883ff89cee43de86223e2 206 SUPERFAMILY SSF46609 1 90 1.96E-36 T 15-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 AM378_19630 f4f446d5f3b883ff89cee43de86223e2 206 PIRSF PIRSF000349 1 206 2.3E-80 T 15-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 AM378_19630 f4f446d5f3b883ff89cee43de86223e2 206 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 97 201 4.8E-41 T 15-10-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 AM378_19630 f4f446d5f3b883ff89cee43de86223e2 206 PRINTS PR01703 Manganese superoxide dismutase signature 73 86 1.2E-27 T 15-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 AM378_19630 f4f446d5f3b883ff89cee43de86223e2 206 PRINTS PR01703 Manganese superoxide dismutase signature 27 40 1.2E-27 T 15-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 AM378_19630 f4f446d5f3b883ff89cee43de86223e2 206 PRINTS PR01703 Manganese superoxide dismutase signature 124 132 1.2E-27 T 15-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 AM378_19630 f4f446d5f3b883ff89cee43de86223e2 206 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 1.2E-27 T 15-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 AM378_19630 f4f446d5f3b883ff89cee43de86223e2 206 PRINTS PR01703 Manganese superoxide dismutase signature 166 178 1.2E-27 T 15-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 AM378_03605 3424a4ac343f13f93fee2bfeb0a8037f 566 Gene3D G3DSA:3.30.70.270 392 562 7.0E-45 T 15-10-2018 AM378_03605 3424a4ac343f13f93fee2bfeb0a8037f 566 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 399 560 2.4E-41 T 15-10-2018 IPR000160 GGDEF domain AM378_03605 3424a4ac343f13f93fee2bfeb0a8037f 566 Pfam PF00990 Diguanylate cyclase, GGDEF domain 404 556 3.4E-37 T 15-10-2018 IPR000160 GGDEF domain AM378_03605 3424a4ac343f13f93fee2bfeb0a8037f 566 SMART SM00267 392 560 1.9E-47 T 15-10-2018 IPR000160 GGDEF domain AM378_03605 3424a4ac343f13f93fee2bfeb0a8037f 566 SUPERFAMILY SSF55073 408 560 3.3E-40 T 15-10-2018 IPR029787 Nucleotide cyclase AM378_18925 d5fd290806bc1220fc14cb8685e79d79 360 SUPERFAMILY SSF53756 15 359 2.83E-86 T 15-10-2018 AM378_18925 d5fd290806bc1220fc14cb8685e79d79 360 Gene3D G3DSA:3.40.50.2000 181 360 2.9E-40 T 15-10-2018 AM378_18925 d5fd290806bc1220fc14cb8685e79d79 360 TIGRFAM TIGR02201 heptsyl_trn_III: putative lipopolysaccharide heptosyltransferase III 16 359 1.7E-160 T 15-10-2018 IPR011916 Lipopolysaccharide heptosyltransferase III, putative AM378_18925 d5fd290806bc1220fc14cb8685e79d79 360 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 89 330 3.6E-49 T 15-10-2018 IPR002201 Glycosyl transferase, family 9 GO:0016757 AM378_18925 d5fd290806bc1220fc14cb8685e79d79 360 Gene3D G3DSA:3.40.50.2000 9 175 5.9E-44 T 15-10-2018 AM378_16530 f92491b5a8e3e658fe1f44b04dbcb2ef 1486 Pfam PF01645 Conserved region in glutamate synthase 792 1155 1.3E-156 T 15-10-2018 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 AM378_16530 f92491b5a8e3e658fe1f44b04dbcb2ef 1486 SUPERFAMILY SSF56235 12 428 1.67E-150 T 15-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AM378_16530 f92491b5a8e3e658fe1f44b04dbcb2ef 1486 Gene3D G3DSA:3.20.20.70 482 1169 0.0 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM378_16530 f92491b5a8e3e658fe1f44b04dbcb2ef 1486 Gene3D G3DSA:3.20.20.70 429 791 0.0 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM378_16530 f92491b5a8e3e658fe1f44b04dbcb2ef 1486 Pfam PF01493 GXGXG motif 1236 1419 9.9E-76 T 15-10-2018 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0016491|GO:0055114 AM378_16530 f92491b5a8e3e658fe1f44b04dbcb2ef 1486 Pfam PF04898 Glutamate synthase central domain 456 736 7.4E-105 T 15-10-2018 IPR006982 Glutamate synthase, central-N GO:0006807|GO:0015930|GO:0055114 AM378_16530 f92491b5a8e3e658fe1f44b04dbcb2ef 1486 Gene3D G3DSA:2.160.20.60 1196 1468 6.6E-104 T 15-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 AM378_16530 f92491b5a8e3e658fe1f44b04dbcb2ef 1486 SUPERFAMILY SSF69336 1211 1465 1.96E-89 T 15-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 AM378_16530 f92491b5a8e3e658fe1f44b04dbcb2ef 1486 SUPERFAMILY SSF51395 433 1188 1.01E-249 T 15-10-2018 AM378_16530 f92491b5a8e3e658fe1f44b04dbcb2ef 1486 Pfam PF00310 Glutamine amidotransferases class-II 12 424 6.3E-176 T 15-10-2018 IPR017932 Glutamine amidotransferase type 2 domain AM378_16530 f92491b5a8e3e658fe1f44b04dbcb2ef 1486 Gene3D G3DSA:3.60.20.10 12 544 0.0 T 15-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AM378_20315 adf84e5a08024e2e602ae8be59cd6c86 285 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 253 279 - T 15-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AM378_20315 adf84e5a08024e2e602ae8be59cd6c86 285 PIRSF PIRSF000770 5 285 2.1E-32 T 15-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AM378_20315 adf84e5a08024e2e602ae8be59cd6c86 285 TIGRFAM TIGR02392 rpoH_proteo: alternative sigma factor RpoH 14 284 1.2E-129 T 15-10-2018 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM378_20315 adf84e5a08024e2e602ae8be59cd6c86 285 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 48 280 1.2E-34 T 15-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 AM378_20315 adf84e5a08024e2e602ae8be59cd6c86 285 Pfam PF04542 Sigma-70 region 2 53 122 2.8E-16 T 15-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 AM378_20315 adf84e5a08024e2e602ae8be59cd6c86 285 Hamap MF_00961 RNA polymerase sigma factor RpoH [rpoH]. 2 285 54.653 T 15-10-2018 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM378_20315 adf84e5a08024e2e602ae8be59cd6c86 285 Pfam PF04545 Sigma-70, region 4 229 280 7.8E-16 T 15-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 AM378_20315 adf84e5a08024e2e602ae8be59cd6c86 285 Pfam PF00140 Sigma-70 factor, region 1.2 15 40 4.4E-7 T 15-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM378_20315 adf84e5a08024e2e602ae8be59cd6c86 285 SUPERFAMILY SSF88946 12 122 3.66E-40 T 15-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 AM378_20315 adf84e5a08024e2e602ae8be59cd6c86 285 SUPERFAMILY SSF88659 200 283 1.35E-18 T 15-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like AM378_20315 adf84e5a08024e2e602ae8be59cd6c86 285 Gene3D G3DSA:1.10.10.10 214 284 4.1E-16 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_20315 adf84e5a08024e2e602ae8be59cd6c86 285 Gene3D G3DSA:1.20.120.1810 2 122 1.2E-27 T 15-10-2018 AM378_20315 adf84e5a08024e2e602ae8be59cd6c86 285 PRINTS PR00046 Major sigma-70 factor signature 77 90 3.9E-19 T 15-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AM378_20315 adf84e5a08024e2e602ae8be59cd6c86 285 PRINTS PR00046 Major sigma-70 factor signature 253 268 3.9E-19 T 15-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AM378_20315 adf84e5a08024e2e602ae8be59cd6c86 285 PRINTS PR00046 Major sigma-70 factor signature 233 245 3.9E-19 T 15-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AM378_20315 adf84e5a08024e2e602ae8be59cd6c86 285 PRINTS PR00046 Major sigma-70 factor signature 268 279 3.9E-19 T 15-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AM378_20315 adf84e5a08024e2e602ae8be59cd6c86 285 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 77 90 - T 15-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AM378_16785 e3d061d4803209d6a3b51907477c2cae 155 Pfam PF00545 ribonuclease 65 152 2.1E-24 T 15-10-2018 IPR000026 Guanine-specific ribonuclease N1/T1/U2 GO:0003723|GO:0004521 AM378_16785 e3d061d4803209d6a3b51907477c2cae 155 SUPERFAMILY SSF53933 49 154 1.3E-36 T 15-10-2018 IPR016191 Ribonuclease/ribotoxin GO:0003723|GO:0004540 AM378_16785 e3d061d4803209d6a3b51907477c2cae 155 PRINTS PR00117 Barnase signature 92 110 8.3E-30 T 15-10-2018 IPR001887 Barnase GO:0003723|GO:0004521 AM378_16785 e3d061d4803209d6a3b51907477c2cae 155 PRINTS PR00117 Barnase signature 72 89 8.3E-30 T 15-10-2018 IPR001887 Barnase GO:0003723|GO:0004521 AM378_16785 e3d061d4803209d6a3b51907477c2cae 155 PRINTS PR00117 Barnase signature 113 132 8.3E-30 T 15-10-2018 IPR001887 Barnase GO:0003723|GO:0004521 AM378_16785 e3d061d4803209d6a3b51907477c2cae 155 PRINTS PR00117 Barnase signature 135 153 8.3E-30 T 15-10-2018 IPR001887 Barnase GO:0003723|GO:0004521 AM378_16785 e3d061d4803209d6a3b51907477c2cae 155 PRINTS PR00117 Barnase signature 52 69 8.3E-30 T 15-10-2018 IPR001887 Barnase GO:0003723|GO:0004521 AM378_16785 e3d061d4803209d6a3b51907477c2cae 155 PIRSF PIRSF001013 1 155 1.0E-60 T 15-10-2018 IPR001887 Barnase GO:0003723|GO:0004521 AM378_16785 e3d061d4803209d6a3b51907477c2cae 155 Gene3D G3DSA:3.10.450.30 41 155 2.8E-44 T 15-10-2018 AM378_01020 de4a817479a70f2410557ac0b1cbf82f 588 Gene3D G3DSA:1.20.58.100 431 547 4.6E-40 T 15-10-2018 AM378_01020 de4a817479a70f2410557ac0b1cbf82f 588 TIGRFAM TIGR01816 sdhA_forward: succinate dehydrogenase, flavoprotein subunit 6 588 2.9E-276 T 15-10-2018 IPR011281 Succinate dehydrogenase, flavoprotein subunit GO:0006099|GO:0016627|GO:0050660|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 AM378_01020 de4a817479a70f2410557ac0b1cbf82f 588 PIRSF PIRSF000171 1 579 2.6E-47 T 15-10-2018 AM378_01020 de4a817479a70f2410557ac0b1cbf82f 588 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 43 52 - T 15-10-2018 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AM378_01020 de4a817479a70f2410557ac0b1cbf82f 588 SUPERFAMILY SSF56425 236 356 4.64E-42 T 15-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 AM378_01020 de4a817479a70f2410557ac0b1cbf82f 588 Gene3D G3DSA:3.50.50.60 9 416 4.9E-173 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AM378_01020 de4a817479a70f2410557ac0b1cbf82f 588 SUPERFAMILY SSF46977 452 588 9.81E-46 T 15-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AM378_01020 de4a817479a70f2410557ac0b1cbf82f 588 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 368 390 3.9E-5 T 15-10-2018 AM378_01020 de4a817479a70f2410557ac0b1cbf82f 588 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 10 29 3.9E-5 T 15-10-2018 AM378_01020 de4a817479a70f2410557ac0b1cbf82f 588 SUPERFAMILY SSF51905 4 441 2.14E-75 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AM378_01020 de4a817479a70f2410557ac0b1cbf82f 588 Pfam PF02910 Fumarate reductase flavoprotein C-term 460 588 5.9E-35 T 15-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AM378_01020 de4a817479a70f2410557ac0b1cbf82f 588 Gene3D G3DSA:3.90.700.10 246 350 4.9E-173 T 15-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 AM378_01020 de4a817479a70f2410557ac0b1cbf82f 588 TIGRFAM TIGR01812 sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 9 588 1.6E-242 T 15-10-2018 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0016627|GO:0022900|GO:0050660|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AM378_01020 de4a817479a70f2410557ac0b1cbf82f 588 Gene3D G3DSA:4.10.80.40 548 588 8.7E-26 T 15-10-2018 AM378_01020 de4a817479a70f2410557ac0b1cbf82f 588 Pfam PF00890 FAD binding domain 9 405 4.0E-118 T 15-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 AM378_15065 93df4fa6d2c5236cd2b9443f103d962d 412 SUPERFAMILY SSF55021 337 411 2.52E-18 T 15-10-2018 AM378_15065 93df4fa6d2c5236cd2b9443f103d962d 412 Gene3D G3DSA:3.40.50.720 14 312 3.4E-111 T 15-10-2018 AM378_15065 93df4fa6d2c5236cd2b9443f103d962d 412 SUPERFAMILY SSF52283 7 138 3.19E-49 T 15-10-2018 AM378_15065 93df4fa6d2c5236cd2b9443f103d962d 412 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 119 294 2.1E-51 T 15-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 AM378_15065 93df4fa6d2c5236cd2b9443f103d962d 412 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 229 245 - T 15-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site AM378_15065 93df4fa6d2c5236cd2b9443f103d962d 412 Gene3D G3DSA:3.40.50.720 109 297 3.4E-111 T 15-10-2018 AM378_15065 93df4fa6d2c5236cd2b9443f103d962d 412 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 154 181 - T 15-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 AM378_15065 93df4fa6d2c5236cd2b9443f103d962d 412 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 14 326 5.2E-38 T 15-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 AM378_15065 93df4fa6d2c5236cd2b9443f103d962d 412 SUPERFAMILY SSF51735 108 295 1.14E-58 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily AM378_15065 93df4fa6d2c5236cd2b9443f103d962d 412 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 200 222 - T 15-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site AM378_15065 93df4fa6d2c5236cd2b9443f103d962d 412 Gene3D G3DSA:3.30.70.260 328 411 3.0E-32 T 15-10-2018 AM378_01260 667324954af32b2f89973894458b5a9c 262 SMART SM00382 34 218 5.3E-14 T 15-10-2018 IPR003593 AAA+ ATPase domain AM378_01260 667324954af32b2f89973894458b5a9c 262 Pfam PF00005 ABC transporter 25 174 2.9E-27 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM378_01260 667324954af32b2f89973894458b5a9c 262 SUPERFAMILY SSF52540 11 235 1.78E-57 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_01260 667324954af32b2f89973894458b5a9c 262 Gene3D G3DSA:3.40.50.300 10 251 2.6E-67 T 15-10-2018 AM378_22335 9b93674776aff638f03d177672d0fdf8 407 PIRSF PIRSF001491 1 407 1.0E-165 T 15-10-2018 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 AM378_22335 9b93674776aff638f03d177672d0fdf8 407 Gene3D G3DSA:3.40.720.10 3 406 5.3E-154 T 15-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 AM378_22335 9b93674776aff638f03d177672d0fdf8 407 Pfam PF01676 Metalloenzyme superfamily 2 398 2.1E-42 T 15-10-2018 IPR006124 Metalloenzyme GO:0003824|GO:0046872 AM378_22335 9b93674776aff638f03d177672d0fdf8 407 Gene3D G3DSA:3.30.70.1250 115 238 5.3E-154 T 15-10-2018 IPR024052 Phosphopentomutase DeoB cap domain superfamily GO:0008973 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 AM378_22335 9b93674776aff638f03d177672d0fdf8 407 SUPERFAMILY SSF53649 1 407 4.06E-72 T 15-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 AM378_22335 9b93674776aff638f03d177672d0fdf8 407 SUPERFAMILY SSF143856 117 235 7.45E-50 T 15-10-2018 IPR024052 Phosphopentomutase DeoB cap domain superfamily GO:0008973 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 AM378_22335 9b93674776aff638f03d177672d0fdf8 407 Hamap MF_00740 Phosphopentomutase [deoB]. 1 407 55.596 T 15-10-2018 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 AM378_22335 9b93674776aff638f03d177672d0fdf8 407 TIGRFAM TIGR01696 deoB: phosphopentomutase 3 405 5.9E-193 T 15-10-2018 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 AM378_05595 b0a944d21e3f7aa43558ba515c7a2b9f 154 SUPERFAMILY SSF54001 35 154 1.3E-39 T 15-10-2018 IPR038765 Papain-like cysteine peptidase superfamily AM378_05595 b0a944d21e3f7aa43558ba515c7a2b9f 154 Gene3D G3DSA:3.90.1720.10 33 154 1.3E-39 T 15-10-2018 AM378_05595 b0a944d21e3f7aa43558ba515c7a2b9f 154 Pfam PF00877 NlpC/P60 family 47 153 3.1E-29 T 15-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain AM378_18855 847172eafee3c5bc0911a14457a134cd 144 Pfam PF00581 Rhodanese-like domain 45 134 8.4E-14 T 15-10-2018 IPR001763 Rhodanese-like domain AM378_18855 847172eafee3c5bc0911a14457a134cd 144 SUPERFAMILY SSF52821 16 143 5.63E-29 T 15-10-2018 IPR036873 Rhodanese-like domain superfamily AM378_18855 847172eafee3c5bc0911a14457a134cd 144 SMART SM00450 41 139 1.3E-18 T 15-10-2018 IPR001763 Rhodanese-like domain AM378_18855 847172eafee3c5bc0911a14457a134cd 144 Gene3D G3DSA:3.40.250.10 43 144 2.3E-22 T 15-10-2018 IPR036873 Rhodanese-like domain superfamily AM378_21690 655315e4ac63104fabdf423c760f964a 230 PRINTS PR01549 Autoinducer synthesis protein signature 55 77 2.6E-47 T 15-10-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 AM378_21690 655315e4ac63104fabdf423c760f964a 230 PRINTS PR01549 Autoinducer synthesis protein signature 35 54 2.6E-47 T 15-10-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 AM378_21690 655315e4ac63104fabdf423c760f964a 230 PRINTS PR01549 Autoinducer synthesis protein signature 78 96 2.6E-47 T 15-10-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 AM378_21690 655315e4ac63104fabdf423c760f964a 230 PRINTS PR01549 Autoinducer synthesis protein signature 157 178 2.6E-47 T 15-10-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 AM378_21690 655315e4ac63104fabdf423c760f964a 230 PRINTS PR01549 Autoinducer synthesis protein signature 179 196 2.6E-47 T 15-10-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 AM378_21690 655315e4ac63104fabdf423c760f964a 230 PRINTS PR01549 Autoinducer synthesis protein signature 110 122 2.6E-47 T 15-10-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 AM378_21690 655315e4ac63104fabdf423c760f964a 230 PRINTS PR01549 Autoinducer synthesis protein signature 135 156 2.6E-47 T 15-10-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 AM378_21690 655315e4ac63104fabdf423c760f964a 230 Gene3D G3DSA:3.40.630.30 17 227 6.7E-53 T 15-10-2018 AM378_21690 655315e4ac63104fabdf423c760f964a 230 ProSitePatterns PS00949 Autoinducer synthase family signature. 39 64 - T 15-10-2018 IPR018311 Autoinducer synthesis, conserved site KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 AM378_21690 655315e4ac63104fabdf423c760f964a 230 SUPERFAMILY SSF55729 17 213 1.72E-37 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase AM378_21690 655315e4ac63104fabdf423c760f964a 230 Pfam PF00765 Autoinducer synthase 25 203 6.1E-64 T 15-10-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 AM378_15370 eb5bd7a04a21fbdfa7ac0c2d2b855791 809 Pfam PF00271 Helicase conserved C-terminal domain 202 324 1.5E-12 T 15-10-2018 IPR001650 Helicase, C-terminal AM378_15370 eb5bd7a04a21fbdfa7ac0c2d2b855791 809 Gene3D G3DSA:3.40.50.300 177 344 1.2E-51 T 15-10-2018 AM378_15370 eb5bd7a04a21fbdfa7ac0c2d2b855791 809 Pfam PF00270 DEAD/DEAH box helicase 14 159 1.2E-9 T 15-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AM378_15370 eb5bd7a04a21fbdfa7ac0c2d2b855791 809 SMART SM00847 385 476 1.7E-11 T 15-10-2018 IPR007502 Helicase-associated domain GO:0004386 AM378_15370 eb5bd7a04a21fbdfa7ac0c2d2b855791 809 PIRSF PIRSF005496 1 809 0.0 T 15-10-2018 AM378_15370 eb5bd7a04a21fbdfa7ac0c2d2b855791 809 TIGRFAM TIGR01970 DEAH_box_HrpB: ATP-dependent helicase HrpB 1 808 0.0 T 15-10-2018 IPR010225 ATP-dependent helicase HrpB GO:0008026 AM378_15370 eb5bd7a04a21fbdfa7ac0c2d2b855791 809 SMART SM00487 2 186 5.4E-17 T 15-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AM378_15370 eb5bd7a04a21fbdfa7ac0c2d2b855791 809 Gene3D G3DSA:1.20.120.1080 370 452 7.9E-10 T 15-10-2018 AM378_15370 eb5bd7a04a21fbdfa7ac0c2d2b855791 809 Gene3D G3DSA:3.40.50.300 1 176 2.1E-54 T 15-10-2018 AM378_15370 eb5bd7a04a21fbdfa7ac0c2d2b855791 809 Pfam PF04408 Helicase associated domain (HA2) 386 444 2.4E-11 T 15-10-2018 IPR007502 Helicase-associated domain GO:0004386 AM378_15370 eb5bd7a04a21fbdfa7ac0c2d2b855791 809 SMART SM00490 227 325 3.1E-15 T 15-10-2018 IPR001650 Helicase, C-terminal AM378_15370 eb5bd7a04a21fbdfa7ac0c2d2b855791 809 Pfam PF08482 ATP-dependent helicase C-terminal 664 796 2.0E-53 T 15-10-2018 IPR013689 ATP-dependent RNA helicase HrpB, C-terminal AM378_15370 eb5bd7a04a21fbdfa7ac0c2d2b855791 809 SUPERFAMILY SSF52540 13 336 6.74E-52 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_07400 efc7f6b62366fbfc4bbbd5a8eefe4df3 370 Pfam PF02653 Branched-chain amino acid transport system / permease component 45 352 2.9E-51 T 15-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 AM378_02960 53185305eca7ed33eded207e0b8c2b30 139 Gene3D G3DSA:3.40.630.30 35 137 6.0E-28 T 15-10-2018 AM378_02960 53185305eca7ed33eded207e0b8c2b30 139 Pfam PF00583 Acetyltransferase (GNAT) family 36 115 7.3E-12 T 15-10-2018 IPR000182 GNAT domain AM378_02960 53185305eca7ed33eded207e0b8c2b30 139 SUPERFAMILY SSF55729 10 137 9.62E-26 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase AM378_02100 f0ad27b7e483e3f89cc3baa113f52133 365 Pfam PF00267 Gram-negative porin 27 365 3.3E-136 T 15-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 AM378_02100 f0ad27b7e483e3f89cc3baa113f52133 365 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 230 242 6.3E-15 T 15-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 AM378_02100 f0ad27b7e483e3f89cc3baa113f52133 365 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 320 337 6.3E-15 T 15-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 AM378_02100 f0ad27b7e483e3f89cc3baa113f52133 365 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 52 63 6.3E-15 T 15-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 AM378_02100 f0ad27b7e483e3f89cc3baa113f52133 365 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 153 164 6.3E-15 T 15-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 AM378_02100 f0ad27b7e483e3f89cc3baa113f52133 365 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 96 106 6.3E-15 T 15-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 AM378_02100 f0ad27b7e483e3f89cc3baa113f52133 365 PRINTS PR00183 E.coli/Salmonella-type porin signature 22 38 3.8E-66 T 15-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 AM378_02100 f0ad27b7e483e3f89cc3baa113f52133 365 PRINTS PR00183 E.coli/Salmonella-type porin signature 96 118 3.8E-66 T 15-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 AM378_02100 f0ad27b7e483e3f89cc3baa113f52133 365 PRINTS PR00183 E.coli/Salmonella-type porin signature 236 253 3.8E-66 T 15-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 AM378_02100 f0ad27b7e483e3f89cc3baa113f52133 365 PRINTS PR00183 E.coli/Salmonella-type porin signature 51 69 3.8E-66 T 15-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 AM378_02100 f0ad27b7e483e3f89cc3baa113f52133 365 PRINTS PR00183 E.coli/Salmonella-type porin signature 151 173 3.8E-66 T 15-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 AM378_02100 f0ad27b7e483e3f89cc3baa113f52133 365 PRINTS PR00183 E.coli/Salmonella-type porin signature 276 295 3.8E-66 T 15-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 AM378_02100 f0ad27b7e483e3f89cc3baa113f52133 365 SUPERFAMILY SSF56935 22 365 7.73E-79 T 15-10-2018 AM378_02100 f0ad27b7e483e3f89cc3baa113f52133 365 Gene3D G3DSA:2.40.160.10 22 365 5.9E-149 T 15-10-2018 IPR023614 Porin domain superfamily AM378_06800 131b979551a74f64e0aa9b65890849e3 200 Pfam PF06684 Amino acid synthesis 5 181 2.7E-61 T 15-10-2018 IPR009569 Amino acid synthesis, putative AM378_06800 131b979551a74f64e0aa9b65890849e3 200 SUPERFAMILY SSF160519 1 194 1.7E-64 T 15-10-2018 IPR035936 BB2672 superfamily AM378_06800 131b979551a74f64e0aa9b65890849e3 200 Gene3D G3DSA:3.30.1330.110 2 192 6.0E-60 T 15-10-2018 IPR035936 BB2672 superfamily AM378_02885 69611b67fb5665f6a4dd22fbdd5b2304 206 ProDom PD002610 PHOSPHORIBOSYL-AMP BIOSYNTHESIS CYCLOHYDROLASE HYDROLASE HISTIDINE AMINO-ACID PRA-CH PHOSPHORIBOSYL-ATP BIFUNCTIONAL INCLUDES: 56 105 2.0E-23 T 15-10-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 AM378_02885 69611b67fb5665f6a4dd22fbdd5b2304 206 Hamap MF_01020 Phosphoribosyl-ATP pyrophosphatase [hisE]. 112 198 18.305 T 15-10-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 AM378_02885 69611b67fb5665f6a4dd22fbdd5b2304 206 Pfam PF01502 Phosphoribosyl-AMP cyclohydrolase 33 106 4.5E-29 T 15-10-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 AM378_02885 69611b67fb5665f6a4dd22fbdd5b2304 206 Hamap MF_01019 Histidine biosynthesis bifunctional protein HisIE [hisI]. 8 203 37.317 T 15-10-2018 IPR023019 Histidine biosynthesis bifunctional protein HisIE GO:0000105|GO:0004635|GO:0004636 KEGG: 00340+3.6.1.31+3.5.4.19 AM378_02885 69611b67fb5665f6a4dd22fbdd5b2304 206 SUPERFAMILY SSF101386 114 203 8.78E-24 T 15-10-2018 AM378_02885 69611b67fb5665f6a4dd22fbdd5b2304 206 Gene3D G3DSA:3.10.20.400 2 97 3.2E-32 T 15-10-2018 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily KEGG: 00340+3.5.4.19 AM378_02885 69611b67fb5665f6a4dd22fbdd5b2304 206 Gene3D G3DSA:1.10.287.1080 112 205 3.5E-28 T 15-10-2018 AM378_02885 69611b67fb5665f6a4dd22fbdd5b2304 206 SUPERFAMILY SSF141734 6 122 1.44E-44 T 15-10-2018 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily KEGG: 00340+3.5.4.19 AM378_02885 69611b67fb5665f6a4dd22fbdd5b2304 206 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 116 201 7.2E-16 T 15-10-2018 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31 AM378_02885 69611b67fb5665f6a4dd22fbdd5b2304 206 TIGRFAM TIGR03188 histidine_hisI: phosphoribosyl-ATP diphosphatase 115 197 5.6E-30 T 15-10-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 AM378_11300 3d0bc01950f15145bb6629b5ec32a99e 262 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM378_11300 3d0bc01950f15145bb6629b5ec32a99e 262 SUPERFAMILY SSF52540 5 229 1.39E-50 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_11300 3d0bc01950f15145bb6629b5ec32a99e 262 SMART SM00382 30 215 4.0E-13 T 15-10-2018 IPR003593 AAA+ ATPase domain AM378_11300 3d0bc01950f15145bb6629b5ec32a99e 262 Gene3D G3DSA:3.40.50.300 5 254 5.8E-57 T 15-10-2018 AM378_11300 3d0bc01950f15145bb6629b5ec32a99e 262 Pfam PF00005 ABC transporter 28 165 2.6E-26 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM378_17085 953a1cb94de026bd0c79c2226ceaa93b 190 SUPERFAMILY SSF51161 2 188 1.94E-45 T 15-10-2018 IPR011004 Trimeric LpxA-like superfamily AM378_17085 953a1cb94de026bd0c79c2226ceaa93b 190 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 74 109 1.0E-5 T 15-10-2018 IPR001451 Hexapeptide repeat AM378_17085 953a1cb94de026bd0c79c2226ceaa93b 190 SMART SM01266 4 58 1.7E-12 T 15-10-2018 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 AM378_17085 953a1cb94de026bd0c79c2226ceaa93b 190 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 144 172 - T 15-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 AM378_17085 953a1cb94de026bd0c79c2226ceaa93b 190 Gene3D G3DSA:2.160.10.10 1 190 5.4E-63 T 15-10-2018 AM378_17085 953a1cb94de026bd0c79c2226ceaa93b 190 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 136 170 6.9E-11 T 15-10-2018 IPR001451 Hexapeptide repeat AM378_17085 953a1cb94de026bd0c79c2226ceaa93b 190 Pfam PF12464 Maltose acetyltransferase 6 56 1.9E-8 T 15-10-2018 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 AM378_11820 d620c526201c5ac5d0f455dcd636860a 616 Pfam PF02080 TrkA-C domain 237 304 4.5E-18 T 15-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AM378_11820 d620c526201c5ac5d0f455dcd636860a 616 Pfam PF02080 TrkA-C domain 332 400 3.9E-12 T 15-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AM378_11820 d620c526201c5ac5d0f455dcd636860a 616 Pfam PF03600 Citrate transporter 436 611 1.6E-22 T 15-10-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 AM378_11820 d620c526201c5ac5d0f455dcd636860a 616 SUPERFAMILY SSF116726 238 300 5.49E-11 T 15-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 AM378_11820 d620c526201c5ac5d0f455dcd636860a 616 SUPERFAMILY SSF116726 325 400 4.32E-18 T 15-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 AM378_11820 d620c526201c5ac5d0f455dcd636860a 616 Gene3D G3DSA:3.30.70.1450 330 404 3.3E-17 T 15-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 AM378_11820 d620c526201c5ac5d0f455dcd636860a 616 Gene3D G3DSA:3.30.70.1450 235 312 4.8E-15 T 15-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 AM378_11820 d620c526201c5ac5d0f455dcd636860a 616 Pfam PF03600 Citrate transporter 22 202 6.4E-35 T 15-10-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 AM378_11820 d620c526201c5ac5d0f455dcd636860a 616 ProSitePatterns PS01271 Sodium:sulfate symporter family signature. 564 580 - T 15-10-2018 IPR031312 Sodium/sulphate symporter, conserved site Reactome: R-HSA-433137 AM378_15980 6a2776bc5f7bb6ad8b4633e837b5701c 210 Pfam PF02734 DAK2 domain 32 205 3.3E-57 T 15-10-2018 IPR004007 DhaL domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 AM378_15980 6a2776bc5f7bb6ad8b4633e837b5701c 210 SMART SM01120 32 206 3.7E-84 T 15-10-2018 IPR004007 DhaL domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 AM378_15980 6a2776bc5f7bb6ad8b4633e837b5701c 210 Gene3D G3DSA:1.25.40.340 1 209 1.8E-75 T 15-10-2018 IPR036117 DhaL domain superfamily GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 AM378_15980 6a2776bc5f7bb6ad8b4633e837b5701c 210 SUPERFAMILY SSF101473 3 207 5.1E-59 T 15-10-2018 IPR036117 DhaL domain superfamily GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 AM378_15980 6a2776bc5f7bb6ad8b4633e837b5701c 210 TIGRFAM TIGR02365 dha_L_ycgS: dihydroxyacetone kinase, L subunit 9 205 2.6E-80 T 15-10-2018 IPR012737 Dihydroxyacetone kinase, subunit L GO:0016772 KEGG: 00561+2.7.1.121 AM378_04555 0a81e66a7fbc5d872529d6d871a7946b 172 Gene3D G3DSA:1.20.1260.10 1 167 2.2E-49 T 15-10-2018 IPR012347 Ferritin-like AM378_04555 0a81e66a7fbc5d872529d6d871a7946b 172 SUPERFAMILY SSF47240 1 160 5.55E-57 T 15-10-2018 IPR009078 Ferritin-like superfamily AM378_04555 0a81e66a7fbc5d872529d6d871a7946b 172 Pfam PF00210 Ferritin-like domain 8 143 1.1E-39 T 15-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 AM378_03030 06c3a0bdeb3c4d68d7dfc709d0b07f03 254 Gene3D G3DSA:2.60.40.10 153 248 2.6E-24 T 15-10-2018 IPR013783 Immunoglobulin-like fold AM378_03030 06c3a0bdeb3c4d68d7dfc709d0b07f03 254 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 34 151 6.6E-37 T 15-10-2018 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 AM378_03030 06c3a0bdeb3c4d68d7dfc709d0b07f03 254 SUPERFAMILY SSF49584 159 249 1.83E-25 T 15-10-2018 IPR036316 Pili assembly chaperone, C-terminal domain superfamily AM378_03030 06c3a0bdeb3c4d68d7dfc709d0b07f03 254 Gene3D G3DSA:2.60.40.10 33 152 8.6E-40 T 15-10-2018 IPR013783 Immunoglobulin-like fold AM378_03030 06c3a0bdeb3c4d68d7dfc709d0b07f03 254 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 175 236 3.4E-17 T 15-10-2018 IPR016148 Pili assembly chaperone, C-terminal AM378_03030 06c3a0bdeb3c4d68d7dfc709d0b07f03 254 ProSitePatterns PS00635 Gram-negative pili assembly chaperone signature. 109 126 - T 15-10-2018 IPR018046 Pili assembly chaperone, conserved site AM378_03030 06c3a0bdeb3c4d68d7dfc709d0b07f03 254 PRINTS PR00969 Pili chaperone signature 34 43 8.5E-34 T 15-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM378_03030 06c3a0bdeb3c4d68d7dfc709d0b07f03 254 PRINTS PR00969 Pili chaperone signature 80 101 8.5E-34 T 15-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM378_03030 06c3a0bdeb3c4d68d7dfc709d0b07f03 254 PRINTS PR00969 Pili chaperone signature 110 127 8.5E-34 T 15-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM378_03030 06c3a0bdeb3c4d68d7dfc709d0b07f03 254 PRINTS PR00969 Pili chaperone signature 170 185 8.5E-34 T 15-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM378_03030 06c3a0bdeb3c4d68d7dfc709d0b07f03 254 PRINTS PR00969 Pili chaperone signature 133 148 8.5E-34 T 15-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM378_03030 06c3a0bdeb3c4d68d7dfc709d0b07f03 254 SUPERFAMILY SSF49354 34 151 6.02E-38 T 15-10-2018 IPR008962 PapD-like superfamily AM378_18055 23cc0e1683538167eb5158ce5f23eed9 660 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 11 96 1.6E-19 T 15-10-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 AM378_18055 23cc0e1683538167eb5158ce5f23eed9 660 Hamap MF_01248 Glycogen debranching enzyme [glgX]. 3 659 73.025 T 15-10-2018 IPR022844 Glycogen debranching enzyme, bacterial GO:0004553|GO:0005977 AM378_18055 23cc0e1683538167eb5158ce5f23eed9 660 Gene3D G3DSA:2.60.40.10 1 133 8.8E-47 T 15-10-2018 IPR013783 Immunoglobulin-like fold AM378_18055 23cc0e1683538167eb5158ce5f23eed9 660 SMART SM00642 170 560 2.0E-6 T 15-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AM378_18055 23cc0e1683538167eb5158ce5f23eed9 660 TIGRFAM TIGR02100 glgX_debranch: glycogen debranching enzyme GlgX 7 657 1.1E-276 T 15-10-2018 IPR011837 Glycogen debranching enzyme, GlgX type GO:0004133|GO:0004553|GO:0005980 AM378_18055 23cc0e1683538167eb5158ce5f23eed9 660 SUPERFAMILY SSF51445 130 567 1.15E-126 T 15-10-2018 IPR017853 Glycoside hydrolase superfamily AM378_18055 23cc0e1683538167eb5158ce5f23eed9 660 Gene3D G3DSA:2.60.40.1180 575 659 1.0E-33 T 15-10-2018 IPR013780 Glycosyl hydrolase, all-beta AM378_18055 23cc0e1683538167eb5158ce5f23eed9 660 Gene3D G3DSA:3.20.20.80 134 574 3.2E-176 T 15-10-2018 AM378_18055 23cc0e1683538167eb5158ce5f23eed9 660 SUPERFAMILY SSF81296 7 144 5.32E-45 T 15-10-2018 IPR014756 Immunoglobulin E-set AM378_09815 8e9f4186c9dec798964a0c73805efbe1 356 Gene3D G3DSA:3.30.1330.60 104 290 1.8E-61 T 15-10-2018 IPR036737 OmpA-like domain superfamily AM378_09815 8e9f4186c9dec798964a0c73805efbe1 356 Pfam PF13677 Membrane MotB of proton-channel complex MotA/MotB 12 64 6.5E-20 T 15-10-2018 IPR025713 Motility protein B, N-terminal domain AM378_09815 8e9f4186c9dec798964a0c73805efbe1 356 Pfam PF00691 OmpA family 157 254 2.6E-13 T 15-10-2018 IPR006665 OmpA-like domain AM378_09815 8e9f4186c9dec798964a0c73805efbe1 356 SUPERFAMILY SSF103088 153 261 1.16E-18 T 15-10-2018 IPR036737 OmpA-like domain superfamily AM378_17030 55fd2f3880aa94d79ab725357c88346b 185 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 140 168 - T 15-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 AM378_17030 55fd2f3880aa94d79ab725357c88346b 185 Pfam PF12464 Maltose acetyltransferase 9 57 4.6E-16 T 15-10-2018 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 AM378_17030 55fd2f3880aa94d79ab725357c88346b 185 SUPERFAMILY SSF51161 6 184 1.52E-51 T 15-10-2018 IPR011004 Trimeric LpxA-like superfamily AM378_17030 55fd2f3880aa94d79ab725357c88346b 185 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 131 166 1.3E-10 T 15-10-2018 IPR001451 Hexapeptide repeat AM378_17030 55fd2f3880aa94d79ab725357c88346b 185 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 95 111 0.0091 T 15-10-2018 IPR001451 Hexapeptide repeat AM378_17030 55fd2f3880aa94d79ab725357c88346b 185 SMART SM01266 7 61 3.2E-18 T 15-10-2018 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 AM378_17030 55fd2f3880aa94d79ab725357c88346b 185 Gene3D G3DSA:2.160.10.10 4 184 7.9E-69 T 15-10-2018 AM378_21535 66a29f9fdc8ab93b0ae619a142662f7b 351 Pfam PF03773 Predicted permease 79 346 6.4E-27 T 15-10-2018 IPR005524 Predicted permease DUF318 AM378_13845 bf78af7e53842036df9b3ba2880c87e4 136 Pfam PF11162 Protein of unknown function (DUF2946) 11 128 1.1E-15 T 15-10-2018 IPR021333 Protein of unknown function DUF2946 AM378_12345 93b8143620dcf035161f0d346649a024 563 Gene3D G3DSA:1.10.1760.20 39 195 6.2E-10 T 15-10-2018 AM378_12345 93b8143620dcf035161f0d346649a024 563 Pfam PF07694 5TMR of 5TMR-LYT 22 187 2.9E-46 T 15-10-2018 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region GO:0000155|GO:0000160|GO:0004673|GO:0016021|GO:0071555 AM378_12345 93b8143620dcf035161f0d346649a024 563 SUPERFAMILY SSF55874 407 543 3.14E-18 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AM378_12345 93b8143620dcf035161f0d346649a024 563 SMART SM00387 445 547 1.1E-5 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AM378_12345 93b8143620dcf035161f0d346649a024 563 Gene3D G3DSA:3.30.565.10 405 549 2.3E-16 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AM378_12345 93b8143620dcf035161f0d346649a024 563 SUPERFAMILY SSF55781 220 339 1.43E-8 T 15-10-2018 AM378_12345 93b8143620dcf035161f0d346649a024 563 Gene3D G3DSA:3.30.450.40 215 343 2.6E-6 T 15-10-2018 IPR029016 GAF-like domain superfamily AM378_12345 93b8143620dcf035161f0d346649a024 563 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 449 544 2.1E-7 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AM378_12345 93b8143620dcf035161f0d346649a024 563 Pfam PF06580 Histidine kinase 353 430 2.1E-24 T 15-10-2018 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 AM378_24120 ccb4a2980bff1b9b57f7410000b4131d 77 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 6 42 4.1E-8 T 15-10-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM AM378_24120 ccb4a2980bff1b9b57f7410000b4131d 77 Gene3D G3DSA:3.40.1620.10 4 40 2.1E-7 T 15-10-2018 AM378_24120 ccb4a2980bff1b9b57f7410000b4131d 77 SUPERFAMILY SSF143120 5 44 3.66E-9 T 15-10-2018 IPR036165 YefM-like superfamily AM378_24120 ccb4a2980bff1b9b57f7410000b4131d 77 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 7 40 1.5E-5 T 15-10-2018 AM378_17650 cbb75e4617ddcb0bb734e2e6b6873f87 278 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 101 268 3.1E-24 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AM378_17650 cbb75e4617ddcb0bb734e2e6b6873f87 278 Gene3D G3DSA:1.10.3720.10 74 271 1.9E-29 T 15-10-2018 IPR035906 MetI-like superfamily AM378_17650 cbb75e4617ddcb0bb734e2e6b6873f87 278 SUPERFAMILY SSF161098 78 260 3.01E-36 T 15-10-2018 IPR035906 MetI-like superfamily AM378_03075 c1161aed05583f3e7f9704dbef32acf7 226 TIGRFAM TIGR00126 deoC: deoxyribose-phosphate aldolase 8 216 5.4E-82 T 15-10-2018 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|Reactome: R-HSA-6798695|Reactome: R-HSA-71336 AM378_03075 c1161aed05583f3e7f9704dbef32acf7 226 PIRSF PIRSF001357 1 224 6.9E-73 T 15-10-2018 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|Reactome: R-HSA-6798695|Reactome: R-HSA-71336 AM378_03075 c1161aed05583f3e7f9704dbef32acf7 226 SUPERFAMILY SSF51569 5 218 1.88E-77 T 15-10-2018 AM378_03075 c1161aed05583f3e7f9704dbef32acf7 226 SMART SM01133 7 218 6.7E-93 T 15-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 AM378_03075 c1161aed05583f3e7f9704dbef32acf7 226 Gene3D G3DSA:3.20.20.70 1 224 1.4E-90 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM378_03075 c1161aed05583f3e7f9704dbef32acf7 226 Hamap MF_00114 Deoxyribose-phosphate aldolase [deoC]. 6 220 34.888 T 15-10-2018 IPR028581 Deoxyribose-phosphate aldolase type I GO:0004139 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180 AM378_03075 c1161aed05583f3e7f9704dbef32acf7 226 Pfam PF01791 DeoC/LacD family aldolase 11 215 3.3E-17 T 15-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 AM378_14145 0c74435efd8c678baa0c9a7b818757ff 217 Gene3D G3DSA:1.10.3720.10 1 217 4.2E-61 T 15-10-2018 IPR035906 MetI-like superfamily AM378_14145 0c74435efd8c678baa0c9a7b818757ff 217 SUPERFAMILY SSF161098 9 201 1.83E-47 T 15-10-2018 IPR035906 MetI-like superfamily AM378_14145 0c74435efd8c678baa0c9a7b818757ff 217 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 32 214 4.6E-22 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AM378_09055 1c98029f7d4726e0fbe216f3b53eb02e 335 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 5 324 2.8E-99 T 15-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 AM378_09055 1c98029f7d4726e0fbe216f3b53eb02e 335 TIGRFAM TIGR00203 cydB: cytochrome d ubiquinol oxidase, subunit II 6 213 2.7E-43 T 15-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 AM378_09055 1c98029f7d4726e0fbe216f3b53eb02e 335 PIRSF PIRSF000267 2 335 1.0E-90 T 15-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 AM378_16085 d7047724545d62b2110d519b262e00bd 162 SUPERFAMILY SSF52141 3 159 2.85E-44 T 15-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AM378_16085 d7047724545d62b2110d519b262e00bd 162 Pfam PF03167 Uracil DNA glycosylase superfamily 4 154 2.1E-25 T 15-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AM378_16085 d7047724545d62b2110d519b262e00bd 162 Hamap MF_01956 G/U mismatch-specific DNA glycosylase [mug]. 1 162 47.432 T 15-10-2018 IPR023502 G/U mismatch-specific DNA glycosylase, bacterial GO:0006281|GO:0019104 AM378_16085 d7047724545d62b2110d519b262e00bd 162 Gene3D G3DSA:3.40.470.10 1 161 3.2E-59 T 15-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AM378_07365 0d28e2aedafc12428c7a219f7888c615 351 Pfam PF07582 AP endonuclease family 2 C terminus 280 334 5.4E-21 T 15-10-2018 IPR011418 AP endonuclease, family 2, C-terminal AM378_07365 0d28e2aedafc12428c7a219f7888c615 351 SUPERFAMILY SSF51658 9 322 5.39E-58 T 15-10-2018 IPR036237 Xylose isomerase-like superfamily AM378_07365 0d28e2aedafc12428c7a219f7888c615 351 Gene3D G3DSA:3.20.20.150 14 324 8.8E-69 T 15-10-2018 AM378_07365 0d28e2aedafc12428c7a219f7888c615 351 Pfam PF01261 Xylose isomerase-like TIM barrel 29 279 2.1E-33 T 15-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain AM378_07620 ade6b151dfb7c54000777a18e17c9c87 107 Pfam PF07027 Protein of unknown function (DUF1318) 19 107 3.7E-29 T 15-10-2018 IPR008309 Uncharacterised conserved protein UCP025560 AM378_07620 ade6b151dfb7c54000777a18e17c9c87 107 PIRSF PIRSF025560 1 107 3.7E-38 T 15-10-2018 IPR008309 Uncharacterised conserved protein UCP025560 AM378_02220 bfd54cdcf47d7243ff20e99529591845 240 Pfam PF00005 ABC transporter 17 165 2.5E-36 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM378_02220 bfd54cdcf47d7243ff20e99529591845 240 SUPERFAMILY SSF52540 1 235 2.8E-80 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_02220 bfd54cdcf47d7243ff20e99529591845 240 Gene3D G3DSA:3.40.50.300 1 240 2.4E-80 T 15-10-2018 AM378_02220 bfd54cdcf47d7243ff20e99529591845 240 PIRSF PIRSF039085 1 240 4.6E-107 T 15-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 AM378_02220 bfd54cdcf47d7243ff20e99529591845 240 SMART SM00382 26 213 1.6E-16 T 15-10-2018 IPR003593 AAA+ ATPase domain AM378_02220 bfd54cdcf47d7243ff20e99529591845 240 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM378_03560 4fde0ca77256afdc79f8cf04eb4a4057 242 Gene3D G3DSA:1.10.10.2260 88 195 1.4E-53 T 15-10-2018 AM378_03560 4fde0ca77256afdc79f8cf04eb4a4057 242 Gene3D G3DSA:1.10.10.2250 1 78 1.2E-38 T 15-10-2018 AM378_03560 4fde0ca77256afdc79f8cf04eb4a4057 242 Pfam PF04288 MukE-like family 10 230 3.3E-126 T 15-10-2018 IPR007385 Prokaryotic chromosome segregation/condensation protein MukE GO:0005737|GO:0007059|GO:0030261 AM378_03560 4fde0ca77256afdc79f8cf04eb4a4057 242 Hamap MF_01802 Chromosome partition protein MukE [mukE]. 10 240 50.793 T 15-10-2018 IPR007385 Prokaryotic chromosome segregation/condensation protein MukE GO:0005737|GO:0007059|GO:0030261 AM378_04420 229697675575de7b0124fb7e0a4b4818 116 PRINTS PR00332 Histidine triad family signature 27 45 7.9E-20 T 15-10-2018 IPR001310 Histidine triad (HIT) protein AM378_04420 229697675575de7b0124fb7e0a4b4818 116 PRINTS PR00332 Histidine triad family signature 6 22 7.9E-20 T 15-10-2018 IPR001310 Histidine triad (HIT) protein AM378_04420 229697675575de7b0124fb7e0a4b4818 116 PRINTS PR00332 Histidine triad family signature 95 105 7.9E-20 T 15-10-2018 IPR001310 Histidine triad (HIT) protein AM378_04420 229697675575de7b0124fb7e0a4b4818 116 SUPERFAMILY SSF54197 2 112 4.96E-36 T 15-10-2018 IPR036265 HIT-like superfamily AM378_04420 229697675575de7b0124fb7e0a4b4818 116 Gene3D G3DSA:3.30.428.10 1 116 5.9E-36 T 15-10-2018 IPR036265 HIT-like superfamily AM378_04420 229697675575de7b0124fb7e0a4b4818 116 ProSitePatterns PS00892 HIT domain signature. 88 106 - T 15-10-2018 IPR019808 Histidine triad, conserved site AM378_04420 229697675575de7b0124fb7e0a4b4818 116 Pfam PF01230 HIT domain 12 109 1.7E-30 T 15-10-2018 IPR001310 Histidine triad (HIT) protein AM378_24205 32c767adba8fdadc2485034a08b50cdb 374 TIGRFAM TIGR00449 tgt_general: tRNA-guanine family transglycosylase 3 367 1.2E-178 T 15-10-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 AM378_24205 32c767adba8fdadc2485034a08b50cdb 374 SUPERFAMILY SSF51713 2 364 1.16E-165 T 15-10-2018 IPR036511 Queuine tRNA-ribosyltransferase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 AM378_24205 32c767adba8fdadc2485034a08b50cdb 374 Hamap MF_00168 Queuine tRNA-ribosyltransferase [tgt]. 1 364 57.973 T 15-10-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 AM378_24205 32c767adba8fdadc2485034a08b50cdb 374 TIGRFAM TIGR00430 Q_tRNA_tgt: tRNA-guanine transglycosylase 3 367 2.3E-189 T 15-10-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 AM378_24205 32c767adba8fdadc2485034a08b50cdb 374 Gene3D G3DSA:3.20.20.105 1 367 2.3E-172 T 15-10-2018 IPR036511 Queuine tRNA-ribosyltransferase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 AM378_24205 32c767adba8fdadc2485034a08b50cdb 374 Pfam PF01702 Queuine tRNA-ribosyltransferase 126 361 2.3E-95 T 15-10-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 AM378_19265 64af14737e6decd0f41635fb8ef0ce49 206 SUPERFAMILY SSF53335 4 204 1.13E-42 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM378_19265 64af14737e6decd0f41635fb8ef0ce49 206 Gene3D G3DSA:3.40.50.150 1 206 1.4E-72 T 15-10-2018 AM378_19265 64af14737e6decd0f41635fb8ef0ce49 206 PIRSF PIRSF003078 1 206 2.9E-64 T 15-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 AM378_19265 64af14737e6decd0f41635fb8ef0ce49 206 Pfam PF02527 rRNA small subunit methyltransferase G 20 201 1.0E-61 T 15-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 AM378_19265 64af14737e6decd0f41635fb8ef0ce49 206 Hamap MF_00074 Ribosomal RNA small subunit methyltransferase G [rsmG]. 13 202 28.633 T 15-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 AM378_19265 64af14737e6decd0f41635fb8ef0ce49 206 TIGRFAM TIGR00138 rsmG_gidB: 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 26 204 1.3E-57 T 15-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 AM378_17270 d26be67412548ee8f4a4792b95c1a651 445 Pfam PF02447 GntP family permease 5 440 3.4E-144 T 15-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 AM378_17270 d26be67412548ee8f4a4792b95c1a651 445 TIGRFAM TIGR00791 gntP: transporter, gluconate:H+ symporter (GntP) family 5 443 2.9E-147 T 15-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 AM378_17270 d26be67412548ee8f4a4792b95c1a651 445 PIRSF PIRSF002746 1 445 5.4E-142 T 15-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 AM378_03650 057a7b1b4b0193ceeb10be2d9e34533c 369 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 300 363 5.2E-13 T 15-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AM378_03650 057a7b1b4b0193ceeb10be2d9e34533c 369 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 324 332 - T 15-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 AM378_03650 057a7b1b4b0193ceeb10be2d9e34533c 369 SUPERFAMILY SSF54292 284 368 1.02E-22 T 15-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 AM378_03650 057a7b1b4b0193ceeb10be2d9e34533c 369 Pfam PF03473 MOSC domain 141 263 6.3E-30 T 15-10-2018 IPR005302 Molybdenum cofactor sulfurase, C-terminal GO:0003824|GO:0030151|GO:0030170 AM378_03650 057a7b1b4b0193ceeb10be2d9e34533c 369 Gene3D G3DSA:3.10.20.30 276 369 9.2E-20 T 15-10-2018 IPR012675 Beta-grasp domain superfamily AM378_03650 057a7b1b4b0193ceeb10be2d9e34533c 369 Pfam PF03476 MOSC N-terminal beta barrel domain 4 118 3.5E-29 T 15-10-2018 IPR005303 MOSC, N-terminal beta barrel KEGG: 00790+2.8.1.9|MetaCyc: PWY-5963 AM378_03650 057a7b1b4b0193ceeb10be2d9e34533c 369 SUPERFAMILY SSF141673 6 134 3.79E-30 T 15-10-2018 AM378_03650 057a7b1b4b0193ceeb10be2d9e34533c 369 SUPERFAMILY SSF50800 5 265 2.3E-15 T 15-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily AM378_14290 5f983911a52e18147dcbea1e60a882c4 280 ProSitePatterns PS01315 Phosphatidate cytidylyltransferase signature. 237 263 - T 15-10-2018 IPR000374 Phosphatidate cytidylyltransferase GO:0016020|GO:0016772 KEGG: 00564+2.7.7.41|KEGG: 04070+2.7.7.41|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7817 AM378_14290 5f983911a52e18147dcbea1e60a882c4 280 Pfam PF01148 Cytidylyltransferase family 4 277 7.1E-73 T 15-10-2018 AM378_12485 2b3ab671a33eed6f4dee248a2d03b4a1 335 Gene3D G3DSA:3.40.50.1980 41 159 2.0E-33 T 15-10-2018 AM378_12485 2b3ab671a33eed6f4dee248a2d03b4a1 335 SUPERFAMILY SSF53807 40 325 4.71E-47 T 15-10-2018 AM378_12485 2b3ab671a33eed6f4dee248a2d03b4a1 335 Gene3D G3DSA:3.40.50.1980 160 335 2.4E-63 T 15-10-2018 AM378_12485 2b3ab671a33eed6f4dee248a2d03b4a1 335 Pfam PF01497 Periplasmic binding protein 63 312 3.6E-31 T 15-10-2018 IPR002491 ABC transporter periplasmic binding domain AM378_11470 dd7b928c4a4f1cff26c5323f6b7c189f 585 SMART SM00487 1 185 3.9E-18 T 15-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AM378_11470 dd7b928c4a4f1cff26c5323f6b7c189f 585 SUPERFAMILY SSF52540 50 359 1.63E-36 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_11470 dd7b928c4a4f1cff26c5323f6b7c189f 585 Gene3D G3DSA:3.40.50.300 186 374 7.4E-34 T 15-10-2018 AM378_11470 dd7b928c4a4f1cff26c5323f6b7c189f 585 Gene3D G3DSA:3.40.50.300 1 167 1.3E-29 T 15-10-2018 AM378_11470 dd7b928c4a4f1cff26c5323f6b7c189f 585 SMART SM00490 262 345 3.0E-9 T 15-10-2018 IPR001650 Helicase, C-terminal AM378_11470 dd7b928c4a4f1cff26c5323f6b7c189f 585 SUPERFAMILY SSF57829 422 467 1.34E-7 T 15-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 AM378_11470 dd7b928c4a4f1cff26c5323f6b7c189f 585 Pfam PF04851 Type III restriction enzyme, res subunit 3 155 1.7E-25 T 15-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 AM378_11470 dd7b928c4a4f1cff26c5323f6b7c189f 585 Pfam PF00271 Helicase conserved C-terminal domain 241 343 2.6E-12 T 15-10-2018 IPR001650 Helicase, C-terminal AM378_03775 f715a3c35686eff79d97ce8f74ce722d 92 Hamap MF_01450 Acylphosphatase [yccX]. 2 91 28.637 T 15-10-2018 IPR028627 Acylphosphatase, bacteria GO:0003998 KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 AM378_03775 f715a3c35686eff79d97ce8f74ce722d 92 Gene3D G3DSA:3.30.70.100 1 91 2.1E-32 T 15-10-2018 AM378_03775 f715a3c35686eff79d97ce8f74ce722d 92 Pfam PF00708 Acylphosphatase 8 89 5.2E-25 T 15-10-2018 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 AM378_03775 f715a3c35686eff79d97ce8f74ce722d 92 PRINTS PR00112 Acylphosphatase signature 61 81 2.2E-6 T 15-10-2018 IPR020456 Acylphosphatase GO:0003998 KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 AM378_03775 f715a3c35686eff79d97ce8f74ce722d 92 PRINTS PR00112 Acylphosphatase signature 26 51 2.2E-6 T 15-10-2018 IPR020456 Acylphosphatase GO:0003998 KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 AM378_03775 f715a3c35686eff79d97ce8f74ce722d 92 PRINTS PR00112 Acylphosphatase signature 5 20 2.2E-6 T 15-10-2018 IPR020456 Acylphosphatase GO:0003998 KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 AM378_03775 f715a3c35686eff79d97ce8f74ce722d 92 ProSitePatterns PS00151 Acylphosphatase signature 2. 34 50 - T 15-10-2018 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 AM378_03775 f715a3c35686eff79d97ce8f74ce722d 92 ProSitePatterns PS00150 Acylphosphatase signature 1. 10 20 - T 15-10-2018 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 AM378_03775 f715a3c35686eff79d97ce8f74ce722d 92 SUPERFAMILY SSF54975 2 92 1.0E-29 T 15-10-2018 IPR036046 Acylphosphatase-like domain superfamily KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 AM378_17405 cb50d091d8ce8177f57bdf3caaed5e6b 129 Pfam PF01196 Ribosomal protein L17 20 116 1.4E-34 T 15-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM378_17405 cb50d091d8ce8177f57bdf3caaed5e6b 129 SUPERFAMILY SSF64263 1 118 5.36E-51 T 15-10-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM378_17405 cb50d091d8ce8177f57bdf3caaed5e6b 129 ProSitePatterns PS01167 Ribosomal protein L17 signature. 34 56 - T 15-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM378_17405 cb50d091d8ce8177f57bdf3caaed5e6b 129 TIGRFAM TIGR00059 L17: ribosomal protein bL17 7 117 7.1E-51 T 15-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM378_17405 cb50d091d8ce8177f57bdf3caaed5e6b 129 Hamap MF_01368 50S ribosomal protein L17 [rplQ]. 5 116 27.022 T 15-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM378_17405 cb50d091d8ce8177f57bdf3caaed5e6b 129 Gene3D G3DSA:3.90.1030.10 1 117 3.4E-48 T 15-10-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM378_15520 9ab037c9ef1eeb1ac051c5759ec5dc00 184 SUPERFAMILY SSF54292 7 89 9.57E-17 T 15-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 AM378_15520 9ab037c9ef1eeb1ac051c5759ec5dc00 184 Gene3D G3DSA:1.10.150.120 95 176 2.9E-23 T 15-10-2018 AM378_15520 9ab037c9ef1eeb1ac051c5759ec5dc00 184 Gene3D G3DSA:3.10.20.30 4 87 1.6E-18 T 15-10-2018 IPR012675 Beta-grasp domain superfamily AM378_15520 9ab037c9ef1eeb1ac051c5759ec5dc00 184 Pfam PF01799 [2Fe-2S] binding domain 84 168 1.0E-22 T 15-10-2018 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 AM378_15520 9ab037c9ef1eeb1ac051c5759ec5dc00 184 SUPERFAMILY SSF47741 101 173 3.66E-22 T 15-10-2018 IPR036884 [2Fe-2S]-binding domain superfamily AM378_08775 42150ddef6b9327c40018a1bec1f90f1 215 Gene3D G3DSA:1.10.10.10 1 90 6.3E-34 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_08775 42150ddef6b9327c40018a1bec1f90f1 215 SUPERFAMILY SSF46785 2 84 4.75E-32 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM378_08775 42150ddef6b9327c40018a1bec1f90f1 215 Gene3D G3DSA:1.10.10.10 95 173 6.0E-31 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_08775 42150ddef6b9327c40018a1bec1f90f1 215 SUPERFAMILY SSF46785 90 172 4.13E-30 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM378_08775 42150ddef6b9327c40018a1bec1f90f1 215 Hamap MF_01584 UPF0502 protein YceH [yceH]. 5 210 35.006 T 15-10-2018 IPR007432 Protein of unknown function DUF480 AM378_08775 42150ddef6b9327c40018a1bec1f90f1 215 Pfam PF04337 Protein of unknown function, DUF480 5 158 4.2E-64 T 15-10-2018 IPR007432 Protein of unknown function DUF480 AM378_07180 36d3d1defeffe35b4fc6f8b490e8c8e9 752 SMART SM01008 207 293 2.6E-17 T 15-10-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead AM378_07180 36d3d1defeffe35b4fc6f8b490e8c8e9 752 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 47 184 1.1E-23 T 15-10-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 AM378_07180 36d3d1defeffe35b4fc6f8b490e8c8e9 752 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 323 561 5.0E-28 T 15-10-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 AM378_07180 36d3d1defeffe35b4fc6f8b490e8c8e9 752 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 599 691 3.7E-13 T 15-10-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 AM378_07180 36d3d1defeffe35b4fc6f8b490e8c8e9 752 Gene3D G3DSA:3.30.365.10 563 747 4.0E-37 T 15-10-2018 AM378_07180 36d3d1defeffe35b4fc6f8b490e8c8e9 752 PIRSF PIRSF036389 1 745 1.7E-208 T 15-10-2018 IPR012368 Oxidoreductase molybdopterin-binding subunit, IorB-related AM378_07180 36d3d1defeffe35b4fc6f8b490e8c8e9 752 SUPERFAMILY SSF56003 40 233 1.06E-33 T 15-10-2018 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily GO:0016491|GO:0055114 AM378_07180 36d3d1defeffe35b4fc6f8b490e8c8e9 752 Gene3D G3DSA:3.30.365.10 45 177 5.2E-36 T 15-10-2018 AM378_07180 36d3d1defeffe35b4fc6f8b490e8c8e9 752 SUPERFAMILY SSF54665 208 291 3.84E-9 T 15-10-2018 IPR036856 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead superfamily AM378_07180 36d3d1defeffe35b4fc6f8b490e8c8e9 752 Gene3D G3DSA:3.30.365.10 345 436 2.4E-45 T 15-10-2018 AM378_07180 36d3d1defeffe35b4fc6f8b490e8c8e9 752 SUPERFAMILY SSF56003 323 747 3.02E-109 T 15-10-2018 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily GO:0016491|GO:0055114 AM378_07180 36d3d1defeffe35b4fc6f8b490e8c8e9 752 Gene3D G3DSA:3.90.1170.50 178 270 1.1E-9 T 15-10-2018 AM378_07180 36d3d1defeffe35b4fc6f8b490e8c8e9 752 Gene3D G3DSA:3.30.365.10 324 553 2.4E-45 T 15-10-2018 AM378_00415 1082f56799d083300384d21e2f955d72 593 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 393 553 1.4E-34 T 15-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 AM378_00415 1082f56799d083300384d21e2f955d72 593 Gene3D G3DSA:3.40.50.970 359 582 1.6E-66 T 15-10-2018 AM378_00415 1082f56799d083300384d21e2f955d72 593 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 193 329 1.1E-35 T 15-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 AM378_00415 1082f56799d083300384d21e2f955d72 593 Gene3D G3DSA:3.40.50.970 3 171 8.1E-69 T 15-10-2018 AM378_00415 1082f56799d083300384d21e2f955d72 593 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 4 172 2.3E-53 T 15-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 AM378_00415 1082f56799d083300384d21e2f955d72 593 SUPERFAMILY SSF52467 157 361 1.0E-47 T 15-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily AM378_00415 1082f56799d083300384d21e2f955d72 593 SUPERFAMILY SSF52518 369 571 1.16E-51 T 15-10-2018 IPR029061 Thiamin diphosphate-binding fold AM378_00415 1082f56799d083300384d21e2f955d72 593 TIGRFAM TIGR01504 glyox_carbo_lig: glyoxylate carboligase 2 589 0.0 T 15-10-2018 IPR006397 Glyoxylate carboligase GO:0009028|GO:0009436 KEGG: 00630+4.1.1.47 AM378_00415 1082f56799d083300384d21e2f955d72 593 Gene3D G3DSA:3.40.50.1220 187 358 8.7E-48 T 15-10-2018 AM378_00415 1082f56799d083300384d21e2f955d72 593 SUPERFAMILY SSF52518 4 184 1.99E-49 T 15-10-2018 IPR029061 Thiamin diphosphate-binding fold AM378_01690 cba947c70035df174c2dbad9348cb037 150 Gene3D G3DSA:1.10.150.120 73 150 4.2E-24 T 15-10-2018 AM378_01690 cba947c70035df174c2dbad9348cb037 150 Pfam PF01799 [2Fe-2S] binding domain 71 141 1.2E-25 T 15-10-2018 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 AM378_01690 cba947c70035df174c2dbad9348cb037 150 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 4 57 6.8E-8 T 15-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AM378_01690 cba947c70035df174c2dbad9348cb037 150 Gene3D G3DSA:3.10.20.30 1 72 2.1E-28 T 15-10-2018 IPR012675 Beta-grasp domain superfamily AM378_01690 cba947c70035df174c2dbad9348cb037 150 SUPERFAMILY SSF47741 71 147 1.44E-28 T 15-10-2018 IPR036884 [2Fe-2S]-binding domain superfamily AM378_01690 cba947c70035df174c2dbad9348cb037 150 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 37 45 - T 15-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 AM378_01690 cba947c70035df174c2dbad9348cb037 150 SUPERFAMILY SSF54292 2 76 3.15E-25 T 15-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 AM378_24220 e0857d036c141d085d68eaba80a825d5 322 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 45 291 2.4E-89 T 15-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 AM378_24220 e0857d036c141d085d68eaba80a825d5 322 Gene3D G3DSA:1.20.1640.10 111 313 2.6E-15 T 15-10-2018 AM378_24220 e0857d036c141d085d68eaba80a825d5 322 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 126 288 1.2E-55 T 15-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial AM378_24220 e0857d036c141d085d68eaba80a825d5 322 SUPERFAMILY SSF82866 79 302 7.98E-43 T 15-10-2018 AM378_24220 e0857d036c141d085d68eaba80a825d5 322 Pfam PF02355 Protein export membrane protein 117 300 6.7E-72 T 15-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial AM378_24220 e0857d036c141d085d68eaba80a825d5 322 PRINTS PR01755 Bacterial translocase SecF protein signature 44 59 1.2E-32 T 15-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial AM378_24220 e0857d036c141d085d68eaba80a825d5 322 PRINTS PR01755 Bacterial translocase SecF protein signature 159 173 1.2E-32 T 15-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial AM378_24220 e0857d036c141d085d68eaba80a825d5 322 PRINTS PR01755 Bacterial translocase SecF protein signature 207 225 1.2E-32 T 15-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial AM378_24220 e0857d036c141d085d68eaba80a825d5 322 PRINTS PR01755 Bacterial translocase SecF protein signature 239 254 1.2E-32 T 15-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial AM378_24220 e0857d036c141d085d68eaba80a825d5 322 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 17 302 28.409 T 15-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 AM378_24220 e0857d036c141d085d68eaba80a825d5 322 Pfam PF07549 SecD/SecF GG Motif 41 66 1.4E-10 T 15-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site AM378_01685 01eaefd1d17ffdc384f4038421c1ec7f 443 Gene3D G3DSA:1.10.760.10 7 137 4.3E-10 T 15-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM378_01685 01eaefd1d17ffdc384f4038421c1ec7f 443 Gene3D G3DSA:1.10.760.10 161 288 5.5E-7 T 15-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM378_01685 01eaefd1d17ffdc384f4038421c1ec7f 443 Gene3D G3DSA:1.10.760.10 289 413 1.1E-28 T 15-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM378_01685 01eaefd1d17ffdc384f4038421c1ec7f 443 PIRSF PIRSF000018 6 424 5.8E-141 T 15-10-2018 IPR014353 Membrane-bound alcohol dehydrogenase, cytochrome c subunit GO:0005506|GO:0016020|GO:0016614|GO:0020037 AM378_01685 01eaefd1d17ffdc384f4038421c1ec7f 443 SUPERFAMILY SSF46626 178 286 2.7E-19 T 15-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM378_01685 01eaefd1d17ffdc384f4038421c1ec7f 443 SUPERFAMILY SSF46626 26 134 2.58E-17 T 15-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM378_01685 01eaefd1d17ffdc384f4038421c1ec7f 443 Pfam PF00034 Cytochrome c 305 388 6.4E-10 T 15-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM378_01685 01eaefd1d17ffdc384f4038421c1ec7f 443 Pfam PF00034 Cytochrome c 34 133 2.4E-5 T 15-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM378_01685 01eaefd1d17ffdc384f4038421c1ec7f 443 SUPERFAMILY SSF46626 305 408 5.07E-21 T 15-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM378_17445 8387aa33ffca69adfa0c37639a24af76 59 TIGRFAM TIGR01308 rpmD_bact: ribosomal protein uL30 5 59 2.0E-26 T 15-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM378_17445 8387aa33ffca69adfa0c37639a24af76 59 PIRSF PIRSF002211 1 59 5.2E-29 T 15-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM378_17445 8387aa33ffca69adfa0c37639a24af76 59 ProSitePatterns PS00634 Ribosomal protein L30 signature. 23 55 - T 15-10-2018 IPR018038 Ribosomal protein L30, conserved site AM378_17445 8387aa33ffca69adfa0c37639a24af76 59 Gene3D G3DSA:3.30.1390.20 1 59 4.3E-27 T 15-10-2018 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily AM378_17445 8387aa33ffca69adfa0c37639a24af76 59 Hamap MF_01371_B 50S ribosomal protein L30 [rpmD]. 2 59 22.14 T 15-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM378_17445 8387aa33ffca69adfa0c37639a24af76 59 Pfam PF00327 Ribosomal protein L30p/L7e 5 55 9.0E-20 T 15-10-2018 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain AM378_17445 8387aa33ffca69adfa0c37639a24af76 59 SUPERFAMILY SSF55129 3 59 1.57E-21 T 15-10-2018 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily AM378_08290 3ed09747035af25688271afe44f456c4 890 SUPERFAMILY SSF53720 6 453 7.98E-85 T 15-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 AM378_08290 3ed09747035af25688271afe44f456c4 890 SUPERFAMILY SSF56796 451 864 3.79E-120 T 15-10-2018 AM378_08290 3ed09747035af25688271afe44f456c4 890 Pfam PF00171 Aldehyde dehydrogenase family 5 399 3.7E-28 T 15-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 AM378_08290 3ed09747035af25688271afe44f456c4 890 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 632 660 - T 15-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 AM378_08290 3ed09747035af25688271afe44f456c4 890 Gene3D G3DSA:3.40.309.10 218 404 2.5E-182 T 15-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 AM378_08290 3ed09747035af25688271afe44f456c4 890 Gene3D G3DSA:1.20.1090.10 645 865 8.3E-63 T 15-10-2018 AM378_08290 3ed09747035af25688271afe44f456c4 890 PIRSF PIRSF000111 1 866 0.0 T 15-10-2018 IPR012079 Bifunctional aldehyde-alcohol dehydrogenase GO:0004022|GO:0006066|GO:0008774|GO:0015976|GO:0055114 KEGG: 00010+1.1.1.1|KEGG: 00071+1.1.1.1|KEGG: 00260+1.1.1.1|KEGG: 00350+1.1.1.1|KEGG: 00592+1.1.1.1|KEGG: 00625+1.1.1.1|KEGG: 00626+1.1.1.1|KEGG: 00830+1.1.1.1|KEGG: 00980+1.1.1.1|KEGG: 00982+1.1.1.1|MetaCyc: PWY-3162|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5079|MetaCyc: PWY-5082|MetaCyc: PWY-5480|MetaCyc: PWY-5486|MetaCyc: PWY-5751|MetaCyc: PWY-6313|MetaCyc: PWY-6333|MetaCyc: PWY-6342|MetaCyc: PWY-6587|MetaCyc: PWY-6802|MetaCyc: PWY-6871|MetaCyc: PWY-7013|MetaCyc: PWY-7111|MetaCyc: PWY-7118|MetaCyc: PWY-7396 AM378_08290 3ed09747035af25688271afe44f456c4 890 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 720 740 - T 15-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 AM378_08290 3ed09747035af25688271afe44f456c4 890 Gene3D G3DSA:3.40.605.10 10 444 2.5E-182 T 15-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 AM378_08290 3ed09747035af25688271afe44f456c4 890 Pfam PF00465 Iron-containing alcohol dehydrogenase 457 851 1.2E-116 T 15-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 AM378_08290 3ed09747035af25688271afe44f456c4 890 Gene3D G3DSA:3.40.50.1970 450 643 9.8E-59 T 15-10-2018 AM378_22030 3d2df54018da0ff8e727a64dbd3f5cff 309 Pfam PF03466 LysR substrate binding domain 101 305 1.6E-20 T 15-10-2018 IPR005119 LysR, substrate-binding AM378_22030 3d2df54018da0ff8e727a64dbd3f5cff 309 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 17 75 5.1E-15 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_22030 3d2df54018da0ff8e727a64dbd3f5cff 309 Gene3D G3DSA:3.40.190.290 107 305 5.9E-12 T 15-10-2018 AM378_22030 3d2df54018da0ff8e727a64dbd3f5cff 309 SUPERFAMILY SSF46785 15 100 1.82E-17 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM378_22030 3d2df54018da0ff8e727a64dbd3f5cff 309 SUPERFAMILY SSF53850 101 305 1.1E-19 T 15-10-2018 AM378_22030 3d2df54018da0ff8e727a64dbd3f5cff 309 Gene3D G3DSA:1.10.10.10 15 106 7.8E-19 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_02120 6d9dbe175d6771791966ead0e5cf17be 732 Gene3D G3DSA:3.40.50.300 26 293 9.7E-40 T 15-10-2018 AM378_02120 6d9dbe175d6771791966ead0e5cf17be 732 Gene3D G3DSA:3.40.50.300 506 697 8.3E-21 T 15-10-2018 AM378_02120 6d9dbe175d6771791966ead0e5cf17be 732 SMART SM00487 23 307 0.0027 T 15-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AM378_02120 6d9dbe175d6771791966ead0e5cf17be 732 Hamap MF_02205 ATP-dependent DNA helicase DinG [dinG]. 34 696 34.551 T 15-10-2018 IPR039000 ATP-dependent DNA helicase DinG GO:0004003 AM378_02120 6d9dbe175d6771791966ead0e5cf17be 732 SUPERFAMILY SSF52540 49 670 4.51E-16 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_02120 6d9dbe175d6771791966ead0e5cf17be 732 Pfam PF06733 DEAD_2 197 263 1.5E-7 T 15-10-2018 IPR010614 DEAD2 GO:0003677|GO:0004003|GO:0005524 AM378_02120 6d9dbe175d6771791966ead0e5cf17be 732 Pfam PF13307 Helicase C-terminal domain 534 688 3.2E-25 T 15-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 AM378_02120 6d9dbe175d6771791966ead0e5cf17be 732 SMART SM00488 18 294 0.0066 T 15-10-2018 IPR006554 Helicase-like, DEXD box c2 type GO:0004003|GO:0016818 AM378_02120 6d9dbe175d6771791966ead0e5cf17be 732 SMART SM00491 545 677 1.3E-34 T 15-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 AM378_02785 73b91c0d1ccea8877642da8a5d9c3b12 457 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 171 190 2.6E-31 T 15-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AM378_02785 73b91c0d1ccea8877642da8a5d9c3b12 457 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 92 106 2.6E-31 T 15-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AM378_02785 73b91c0d1ccea8877642da8a5d9c3b12 457 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 239 254 2.6E-31 T 15-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AM378_02785 73b91c0d1ccea8877642da8a5d9c3b12 457 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 210 223 2.6E-31 T 15-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AM378_02785 73b91c0d1ccea8877642da8a5d9c3b12 457 SUPERFAMILY SSF53738 264 369 7.06E-32 T 15-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AM378_02785 73b91c0d1ccea8877642da8a5d9c3b12 457 SUPERFAMILY SSF53738 5 177 4.71E-39 T 15-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AM378_02785 73b91c0d1ccea8877642da8a5d9c3b12 457 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 154 259 2.0E-23 T 15-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AM378_02785 73b91c0d1ccea8877642da8a5d9c3b12 457 SUPERFAMILY SSF53738 155 262 1.37E-27 T 15-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AM378_02785 73b91c0d1ccea8877642da8a5d9c3b12 457 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 8 134 6.6E-33 T 15-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AM378_02785 73b91c0d1ccea8877642da8a5d9c3b12 457 Gene3D G3DSA:3.30.310.50 375 457 1.1E-27 T 15-10-2018 AM378_02785 73b91c0d1ccea8877642da8a5d9c3b12 457 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 93 102 - T 15-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AM378_02785 73b91c0d1ccea8877642da8a5d9c3b12 457 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 379 455 9.7E-11 T 15-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AM378_02785 73b91c0d1ccea8877642da8a5d9c3b12 457 Gene3D G3DSA:3.40.120.10 3 147 2.0E-51 T 15-10-2018 AM378_02785 73b91c0d1ccea8877642da8a5d9c3b12 457 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 264 371 6.0E-24 T 15-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AM378_02785 73b91c0d1ccea8877642da8a5d9c3b12 457 Gene3D G3DSA:3.40.120.10 173 254 4.8E-31 T 15-10-2018 AM378_02785 73b91c0d1ccea8877642da8a5d9c3b12 457 SUPERFAMILY SSF55957 374 457 4.36E-21 T 15-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AM378_02785 73b91c0d1ccea8877642da8a5d9c3b12 457 Gene3D G3DSA:3.40.120.10 256 371 8.2E-33 T 15-10-2018 AM378_09195 6af006b5aeed05427bf1517c215cfd31 464 SUPERFAMILY SSF103473 18 463 1.7E-37 T 15-10-2018 IPR036259 MFS transporter superfamily AM378_09195 6af006b5aeed05427bf1517c215cfd31 464 Gene3D G3DSA:1.20.1250.20 239 464 3.4E-73 T 15-10-2018 AM378_09195 6af006b5aeed05427bf1517c215cfd31 464 TIGRFAM TIGR00886 2A0108: nitrite transporter 37 419 8.9E-109 T 15-10-2018 IPR004737 Nitrate transporter GO:0015112|GO:0015113|GO:0015706|GO:0015707|GO:0016021 AM378_09195 6af006b5aeed05427bf1517c215cfd31 464 Pfam PF07690 Major Facilitator Superfamily 46 379 2.6E-14 T 15-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM378_09195 6af006b5aeed05427bf1517c215cfd31 464 Gene3D G3DSA:1.20.1250.20 4 238 2.5E-84 T 15-10-2018 AM378_16900 762803d6183d87c7e17e23fe9b62b9f8 155 SUPERFAMILY SSF51230 80 155 3.93E-27 T 15-10-2018 IPR011053 Single hybrid motif AM378_16900 762803d6183d87c7e17e23fe9b62b9f8 155 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 111 128 - T 15-10-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 AM378_16900 762803d6183d87c7e17e23fe9b62b9f8 155 Pfam PF00364 Biotin-requiring enzyme 81 154 1.1E-26 T 15-10-2018 IPR000089 Biotin/lipoyl attachment AM378_16900 762803d6183d87c7e17e23fe9b62b9f8 155 Gene3D G3DSA:2.40.50.100 76 155 7.1E-33 T 15-10-2018 AM378_16900 762803d6183d87c7e17e23fe9b62b9f8 155 TIGRFAM TIGR00531 BCCP: acetyl-CoA carboxylase, biotin carboxyl carrier protein 1 155 7.1E-68 T 15-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 AM378_16900 762803d6183d87c7e17e23fe9b62b9f8 155 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 116 129 1.3E-18 T 15-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 AM378_16900 762803d6183d87c7e17e23fe9b62b9f8 155 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 101 115 1.3E-18 T 15-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 AM378_16900 762803d6183d87c7e17e23fe9b62b9f8 155 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 84 97 1.3E-18 T 15-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 AM378_22215 c92c44fba606cc7d1c096e7e0461acfb 409 TIGRFAM TIGR00885 fucP: L-fucose:H+ symporter permease 24 405 1.6E-96 T 15-10-2018 IPR005275 L-fucose permease FucP GO:0015150|GO:0015756 AM378_22215 c92c44fba606cc7d1c096e7e0461acfb 409 Gene3D G3DSA:1.20.1250.20 225 408 5.7E-60 T 15-10-2018 AM378_22215 c92c44fba606cc7d1c096e7e0461acfb 409 Pfam PF07690 Major Facilitator Superfamily 30 371 1.5E-24 T 15-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM378_22215 c92c44fba606cc7d1c096e7e0461acfb 409 SUPERFAMILY SSF103473 17 407 4.71E-46 T 15-10-2018 IPR036259 MFS transporter superfamily AM378_22215 c92c44fba606cc7d1c096e7e0461acfb 409 TIGRFAM TIGR01272 gluP: glucose/galactose transporter WARNING 104 402 6.5E-61 T 15-10-2018 IPR005964 Bacterial glucose/galactose transporter GO:0005354|GO:0005355|GO:0015757|GO:0016021|GO:1904659 AM378_22215 c92c44fba606cc7d1c096e7e0461acfb 409 Gene3D G3DSA:1.20.1250.20 19 220 2.2E-64 T 15-10-2018 AM378_16695 62b7616fc3da6d1da9510a2413b6ed35 372 Gene3D G3DSA:3.40.640.10 23 277 9.4E-51 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AM378_16695 62b7616fc3da6d1da9510a2413b6ed35 372 SUPERFAMILY SSF53383 8 367 8.11E-33 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM378_16695 62b7616fc3da6d1da9510a2413b6ed35 372 TIGRFAM TIGR01437 selA_rel: uncharacterized pyridoxal phosphate-dependent enzyme 4 366 1.6E-179 T 15-10-2018 IPR006337 Pyridoxal phosphate-dependent enzyme, SelA-like KEGG: 00030+4.3.1.29|MetaCyc: PWY-7310 AM378_16695 62b7616fc3da6d1da9510a2413b6ed35 372 Pfam PF03841 L-seryl-tRNA selenium transferase 76 274 1.5E-14 T 15-10-2018 IPR018319 L-seryl-tRNA selenium transferase-like KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1 AM378_08565 9b3590a587318541b87a06e83abd4e5c 90 ProDom PD030374 YCGL UNCHARACTERIZED SIMILAR BACTERIA HI1446 Y2231 HYDROLASE CYTOPLASMIC YPO2080 SO2575 1 82 3.0E-31 T 15-10-2018 IPR027354 YcgL domain AM378_08565 9b3590a587318541b87a06e83abd4e5c 90 SUPERFAMILY SSF160191 1 85 1.57E-39 T 15-10-2018 IPR038068 YcgL-like superfamily AM378_08565 9b3590a587318541b87a06e83abd4e5c 90 Gene3D G3DSA:3.10.510.20 1 74 2.0E-32 T 15-10-2018 IPR038068 YcgL-like superfamily AM378_08565 9b3590a587318541b87a06e83abd4e5c 90 Pfam PF05166 YcgL domain 3 75 7.0E-34 T 15-10-2018 IPR027354 YcgL domain AM378_08565 9b3590a587318541b87a06e83abd4e5c 90 Hamap MF_01866 Protein YcgL [ycgL]. 1 88 27.303 T 15-10-2018 IPR027354 YcgL domain AM378_01000 d760e5bbaed6d7433604886d7aab2612 263 SUPERFAMILY SSF81624 2 127 1.44E-22 T 15-10-2018 IPR035937 MutM-like, N-terminal AM378_01000 d760e5bbaed6d7433604886d7aab2612 263 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 126 205 2.7E-11 T 15-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 AM378_01000 d760e5bbaed6d7433604886d7aab2612 263 Gene3D G3DSA:1.10.8.50 128 263 5.2E-41 T 15-10-2018 AM378_01000 d760e5bbaed6d7433604886d7aab2612 263 SMART SM01232 126 221 4.4E-18 T 15-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 AM378_01000 d760e5bbaed6d7433604886d7aab2612 263 Hamap MF_01253 Endonuclease 8 [nei]. 1 263 59.9 T 15-10-2018 IPR023713 Endonuclease VIII GO:0003684|GO:0004519|GO:0006284|GO:0008270 AM378_01000 d760e5bbaed6d7433604886d7aab2612 263 SUPERFAMILY SSF57716 226 263 4.16E-11 T 15-10-2018 AM378_01000 d760e5bbaed6d7433604886d7aab2612 263 ProSitePatterns PS01242 Zinc finger FPG-type signature. 238 262 - T 15-10-2018 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site GO:0003677|GO:0003906|GO:0006281|GO:0008270|GO:0016799 AM378_01000 d760e5bbaed6d7433604886d7aab2612 263 Gene3D G3DSA:3.20.190.10 2 127 1.2E-27 T 15-10-2018 IPR035937 MutM-like, N-terminal AM378_01000 d760e5bbaed6d7433604886d7aab2612 263 SMART SM00898 2 110 2.2E-15 T 15-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 AM378_01000 d760e5bbaed6d7433604886d7aab2612 263 Pfam PF06827 Zinc finger found in FPG and IleRS 235 263 1.7E-7 T 15-10-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 AM378_01000 d760e5bbaed6d7433604886d7aab2612 263 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 1 102 2.1E-9 T 15-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 AM378_01000 d760e5bbaed6d7433604886d7aab2612 263 SUPERFAMILY SSF46946 125 215 3.09E-18 T 15-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 AM378_09725 aae3a1021c8c0d436731ce2e836110d4 134 TIGRFAM TIGR01395 FlgC: flagellar basal-body rod protein FlgC 4 134 3.5E-52 T 15-10-2018 IPR006299 Flagellar basal-body rod protein FlgC GO:0030694|GO:0071973 AM378_09725 aae3a1021c8c0d436731ce2e836110d4 134 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 87 132 2.3E-12 T 15-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain AM378_09725 aae3a1021c8c0d436731ce2e836110d4 134 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 13 33 - T 15-10-2018 IPR019776 Flagellar basal body rod protein, conserved site AM378_09725 aae3a1021c8c0d436731ce2e836110d4 134 Pfam PF00460 Flagella basal body rod protein 7 37 1.3E-8 T 15-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 AM378_16385 4a9572c3c73beca36dae082338e96f7b 324 Pfam PF03741 Integral membrane protein TerC family 81 283 5.6E-56 T 15-10-2018 IPR005496 Integral membrane protein TerC GO:0016021 AM378_16385 4a9572c3c73beca36dae082338e96f7b 324 TIGRFAM TIGR03718 R_switched_Alx: integral membrane protein, TerC family 8 314 6.7E-122 T 15-10-2018 IPR022369 Integral membrane protein TerC, riboswitch-linked GO:0016021 AM378_11005 9fb4232e7a6f03da71ad6129dfd129a8 291 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 262 283 2.5E-10 T 15-10-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal AM378_11005 9fb4232e7a6f03da71ad6129dfd129a8 291 ProSitePatterns PS00211 ABC transporters family signature. 184 198 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM378_11005 9fb4232e7a6f03da71ad6129dfd129a8 291 SUPERFAMILY SSF52540 4 283 9.4E-58 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_11005 9fb4232e7a6f03da71ad6129dfd129a8 291 Pfam PF00005 ABC transporter 21 211 6.4E-26 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM378_11005 9fb4232e7a6f03da71ad6129dfd129a8 291 SMART SM00382 30 261 4.1E-11 T 15-10-2018 IPR003593 AAA+ ATPase domain AM378_20595 d214cfbb6edf1562c195c44abefd242c 394 SUPERFAMILY SSF52540 6 219 2.58E-60 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_20595 d214cfbb6edf1562c195c44abefd242c 394 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 393 7.0E-238 T 15-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AM378_20595 d214cfbb6edf1562c195c44abefd242c 394 Gene3D G3DSA:3.40.50.300 1 203 4.8E-71 T 15-10-2018 AM378_20595 d214cfbb6edf1562c195c44abefd242c 394 Pfam PF00009 Elongation factor Tu GTP binding domain 10 201 4.6E-59 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM378_20595 d214cfbb6edf1562c195c44abefd242c 394 Pfam PF03143 Elongation factor Tu C-terminal domain 298 392 1.3E-33 T 15-10-2018 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal AM378_20595 d214cfbb6edf1562c195c44abefd242c 394 Gene3D G3DSA:2.40.30.10 206 334 4.9E-53 T 15-10-2018 AM378_20595 d214cfbb6edf1562c195c44abefd242c 394 SUPERFAMILY SSF50447 205 301 1.71E-30 T 15-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily AM378_20595 d214cfbb6edf1562c195c44abefd242c 394 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 15-10-2018 IPR031157 Tr-type G domain, conserved site AM378_20595 d214cfbb6edf1562c195c44abefd242c 394 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 148 9.7E-15 T 15-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 AM378_20595 d214cfbb6edf1562c195c44abefd242c 394 PRINTS PR00315 GTP-binding elongation factor signature 14 27 2.0E-24 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM378_20595 d214cfbb6edf1562c195c44abefd242c 394 PRINTS PR00315 GTP-binding elongation factor signature 58 66 2.0E-24 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM378_20595 d214cfbb6edf1562c195c44abefd242c 394 PRINTS PR00315 GTP-binding elongation factor signature 94 105 2.0E-24 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM378_20595 d214cfbb6edf1562c195c44abefd242c 394 PRINTS PR00315 GTP-binding elongation factor signature 131 140 2.0E-24 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM378_20595 d214cfbb6edf1562c195c44abefd242c 394 PRINTS PR00315 GTP-binding elongation factor signature 78 88 2.0E-24 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM378_20595 d214cfbb6edf1562c195c44abefd242c 394 Gene3D G3DSA:2.40.30.10 338 393 1.7E-29 T 15-10-2018 AM378_20595 d214cfbb6edf1562c195c44abefd242c 394 SUPERFAMILY SSF50465 298 393 5.18E-36 T 15-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal AM378_20595 d214cfbb6edf1562c195c44abefd242c 394 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 394 61.034 T 15-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AM378_20595 d214cfbb6edf1562c195c44abefd242c 394 Pfam PF03144 Elongation factor Tu domain 2 225 293 3.9E-17 T 15-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 AM378_01670 a9975cbcac64cfd1caf26c7cf185f1bb 266 PRINTS PR00111 Alpha/beta hydrolase fold signature 84 97 4.3E-9 T 15-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AM378_01670 a9975cbcac64cfd1caf26c7cf185f1bb 266 PRINTS PR00111 Alpha/beta hydrolase fold signature 98 111 4.3E-9 T 15-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AM378_01670 a9975cbcac64cfd1caf26c7cf185f1bb 266 PRINTS PR00111 Alpha/beta hydrolase fold signature 204 218 4.3E-9 T 15-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AM378_01670 a9975cbcac64cfd1caf26c7cf185f1bb 266 PRINTS PR00111 Alpha/beta hydrolase fold signature 39 54 4.3E-9 T 15-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AM378_01670 a9975cbcac64cfd1caf26c7cf185f1bb 266 Gene3D G3DSA:3.40.50.1820 1 261 3.2E-51 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold AM378_01670 a9975cbcac64cfd1caf26c7cf185f1bb 266 PRINTS PR00412 Epoxide hydrolase signature 98 111 7.7E-10 T 15-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AM378_01670 a9975cbcac64cfd1caf26c7cf185f1bb 266 PRINTS PR00412 Epoxide hydrolase signature 234 256 7.7E-10 T 15-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AM378_01670 a9975cbcac64cfd1caf26c7cf185f1bb 266 PRINTS PR00412 Epoxide hydrolase signature 39 54 7.7E-10 T 15-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AM378_01670 a9975cbcac64cfd1caf26c7cf185f1bb 266 SUPERFAMILY SSF53474 3 258 1.77E-55 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold AM378_01670 a9975cbcac64cfd1caf26c7cf185f1bb 266 Pfam PF00561 alpha/beta hydrolase fold 16 117 1.3E-16 T 15-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AM378_01990 fd63495aa837a765073d283ae3096418 623 SUPERFAMILY SSF51556 63 495 6.53E-45 T 15-10-2018 IPR032466 Metal-dependent hydrolase AM378_01990 fd63495aa837a765073d283ae3096418 623 SUPERFAMILY SSF51338 3 544 4.32E-23 T 15-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 AM378_01990 fd63495aa837a765073d283ae3096418 623 Gene3D G3DSA:3.10.310.70 83 194 1.5E-93 T 15-10-2018 AM378_01990 fd63495aa837a765073d283ae3096418 623 Gene3D G3DSA:3.20.20.140 64 495 1.5E-93 T 15-10-2018 AM378_01990 fd63495aa837a765073d283ae3096418 623 Gene3D G3DSA:2.30.40.10 11 511 1.5E-93 T 15-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 AM378_01990 fd63495aa837a765073d283ae3096418 623 Pfam PF07969 Amidohydrolase family 52 536 1.2E-122 T 15-10-2018 IPR013108 Amidohydrolase 3 AM378_01005 7b32e471311a8eda5372400f095c8c77 430 ProSitePatterns PS00480 Citrate synthase signature. 304 316 - T 15-10-2018 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 Reactome: R-HSA-1268020|Reactome: R-HSA-71403 AM378_01005 7b32e471311a8eda5372400f095c8c77 430 PRINTS PR00143 Citrate synthase signature 220 235 2.1E-56 T 15-10-2018 IPR002020 Citrate synthase GO:0046912 AM378_01005 7b32e471311a8eda5372400f095c8c77 430 PRINTS PR00143 Citrate synthase signature 361 377 2.1E-56 T 15-10-2018 IPR002020 Citrate synthase GO:0046912 AM378_01005 7b32e471311a8eda5372400f095c8c77 430 PRINTS PR00143 Citrate synthase signature 166 179 2.1E-56 T 15-10-2018 IPR002020 Citrate synthase GO:0046912 AM378_01005 7b32e471311a8eda5372400f095c8c77 430 PRINTS PR00143 Citrate synthase signature 242 270 2.1E-56 T 15-10-2018 IPR002020 Citrate synthase GO:0046912 AM378_01005 7b32e471311a8eda5372400f095c8c77 430 PRINTS PR00143 Citrate synthase signature 381 395 2.1E-56 T 15-10-2018 IPR002020 Citrate synthase GO:0046912 AM378_01005 7b32e471311a8eda5372400f095c8c77 430 PRINTS PR00143 Citrate synthase signature 297 317 2.1E-56 T 15-10-2018 IPR002020 Citrate synthase GO:0046912 AM378_01005 7b32e471311a8eda5372400f095c8c77 430 Gene3D G3DSA:1.10.230.10 269 378 4.4E-151 T 15-10-2018 IPR016143 Citrate synthase-like, small alpha subdomain AM378_01005 7b32e471311a8eda5372400f095c8c77 430 PIRSF PIRSF001369 39 430 5.6E-173 T 15-10-2018 IPR024176 Citrate synthase, bacterial-type AM378_01005 7b32e471311a8eda5372400f095c8c77 430 Pfam PF00285 Citrate synthase, C-terminal domain 47 412 1.5E-132 T 15-10-2018 IPR002020 Citrate synthase GO:0046912 AM378_01005 7b32e471311a8eda5372400f095c8c77 430 Gene3D G3DSA:1.10.580.10 58 412 4.4E-151 T 15-10-2018 IPR016142 Citrate synthase-like, large alpha subdomain Reactome: R-HSA-1268020|Reactome: R-HSA-71403 AM378_01005 7b32e471311a8eda5372400f095c8c77 430 SUPERFAMILY SSF48256 7 424 2.49E-165 T 15-10-2018 IPR036969 Citrate synthase superfamily GO:0046912 AM378_01005 7b32e471311a8eda5372400f095c8c77 430 TIGRFAM TIGR01798 cit_synth_I: citrate (Si)-synthase 16 423 1.7E-236 T 15-10-2018 IPR010953 Citrate synthase, type I GO:0004108|GO:0005737 AM378_01005 7b32e471311a8eda5372400f095c8c77 430 Gene3D G3DSA:2.20.28.60 1 51 7.8E-21 T 15-10-2018 AM378_21065 691cbf871dcdbaed6da05984fbd1ec93 432 ProSitePatterns PS00513 Adenylosuccinate synthetase active site. 133 144 - T 15-10-2018 IPR033128 Adenylosuccinate synthase, active site KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 AM378_21065 691cbf871dcdbaed6da05984fbd1ec93 432 SUPERFAMILY SSF52540 3 431 4.89E-180 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_21065 691cbf871dcdbaed6da05984fbd1ec93 432 ProSitePatterns PS01266 Adenylosuccinate synthetase GTP-binding site. 11 18 - T 15-10-2018 IPR018220 Adenylosuccinate synthase, GTP-binding site GO:0005525 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 AM378_21065 691cbf871dcdbaed6da05984fbd1ec93 432 Pfam PF00709 Adenylosuccinate synthetase 5 423 5.1E-179 T 15-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 AM378_21065 691cbf871dcdbaed6da05984fbd1ec93 432 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 432 219.527 T 15-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 AM378_21065 691cbf871dcdbaed6da05984fbd1ec93 432 SMART SM00788 4 425 1.8E-300 T 15-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 AM378_21065 691cbf871dcdbaed6da05984fbd1ec93 432 TIGRFAM TIGR00184 purA: adenylosuccinate synthase 6 430 2.0E-203 T 15-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 AM378_21065 691cbf871dcdbaed6da05984fbd1ec93 432 Gene3D G3DSA:3.40.440.10 6 249 6.5E-105 T 15-10-2018 AM378_21065 691cbf871dcdbaed6da05984fbd1ec93 432 Gene3D G3DSA:1.10.300.10 102 201 6.5E-105 T 15-10-2018 AM378_21065 691cbf871dcdbaed6da05984fbd1ec93 432 Gene3D G3DSA:3.90.170.10 267 432 4.6E-71 T 15-10-2018 AM378_22930 299b48b0064c4cde9e7be959604352c8 296 TIGRFAM TIGR00078 nadC: nicotinate-nucleotide diphosphorylase (carboxylating) 27 295 1.1E-99 T 15-10-2018 IPR004393 Nicotinate-nucleotide pyrophosphorylase GO:0004514|GO:0019363 KEGG: 00760+2.4.2.19|MetaCyc: PWY-5316|MetaCyc: PWY-5653|MetaCyc: PWY-7342|Reactome: R-HSA-196807 AM378_22930 299b48b0064c4cde9e7be959604352c8 296 SUPERFAMILY SSF54675 14 129 1.31E-32 T 15-10-2018 AM378_22930 299b48b0064c4cde9e7be959604352c8 296 PIRSF PIRSF006250 17 296 2.7E-106 T 15-10-2018 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD Reactome: R-HSA-196807 AM378_22930 299b48b0064c4cde9e7be959604352c8 296 Gene3D G3DSA:3.20.20.70 139 285 2.0E-119 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM378_22930 299b48b0064c4cde9e7be959604352c8 296 Pfam PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain 130 294 4.2E-61 T 15-10-2018 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 Reactome: R-HSA-196807 AM378_22930 299b48b0064c4cde9e7be959604352c8 296 Gene3D G3DSA:3.90.1170.20 22 294 2.0E-119 T 15-10-2018 IPR037128 Quinolinate phosphoribosyl transferase, N-terminal domain superfamily GO:0016763 Reactome: R-HSA-196807 AM378_22930 299b48b0064c4cde9e7be959604352c8 296 Pfam PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain 43 128 5.7E-26 T 15-10-2018 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 Reactome: R-HSA-196807 AM378_22930 299b48b0064c4cde9e7be959604352c8 296 SUPERFAMILY SSF51690 130 295 2.43E-58 T 15-10-2018 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 AM378_15940 66c953bb64b26f7f5dc8595150918fb5 631 PRINTS PR01098 Topoisomerase IV subunit B signature 175 192 3.7E-153 T 15-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AM378_15940 66c953bb64b26f7f5dc8595150918fb5 631 PRINTS PR01098 Topoisomerase IV subunit B signature 312 327 3.7E-153 T 15-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AM378_15940 66c953bb64b26f7f5dc8595150918fb5 631 PRINTS PR01098 Topoisomerase IV subunit B signature 504 520 3.7E-153 T 15-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AM378_15940 66c953bb64b26f7f5dc8595150918fb5 631 PRINTS PR01098 Topoisomerase IV subunit B signature 239 262 3.7E-153 T 15-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AM378_15940 66c953bb64b26f7f5dc8595150918fb5 631 PRINTS PR01098 Topoisomerase IV subunit B signature 150 165 3.7E-153 T 15-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AM378_15940 66c953bb64b26f7f5dc8595150918fb5 631 PRINTS PR01098 Topoisomerase IV subunit B signature 470 482 3.7E-153 T 15-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AM378_15940 66c953bb64b26f7f5dc8595150918fb5 631 PRINTS PR01098 Topoisomerase IV subunit B signature 449 470 3.7E-153 T 15-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AM378_15940 66c953bb64b26f7f5dc8595150918fb5 631 PRINTS PR01098 Topoisomerase IV subunit B signature 27 40 3.7E-153 T 15-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AM378_15940 66c953bb64b26f7f5dc8595150918fb5 631 PRINTS PR01098 Topoisomerase IV subunit B signature 538 560 3.7E-153 T 15-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AM378_15940 66c953bb64b26f7f5dc8595150918fb5 631 PRINTS PR01098 Topoisomerase IV subunit B signature 136 150 3.7E-153 T 15-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AM378_15940 66c953bb64b26f7f5dc8595150918fb5 631 PRINTS PR01098 Topoisomerase IV subunit B signature 193 214 3.7E-153 T 15-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AM378_15940 66c953bb64b26f7f5dc8595150918fb5 631 PRINTS PR01098 Topoisomerase IV subunit B signature 295 311 3.7E-153 T 15-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AM378_15940 66c953bb64b26f7f5dc8595150918fb5 631 PRINTS PR01098 Topoisomerase IV subunit B signature 363 388 3.7E-153 T 15-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AM378_15940 66c953bb64b26f7f5dc8595150918fb5 631 PRINTS PR01098 Topoisomerase IV subunit B signature 339 362 3.7E-153 T 15-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AM378_15940 66c953bb64b26f7f5dc8595150918fb5 631 SMART SM00387 28 174 1.1E-19 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AM378_15940 66c953bb64b26f7f5dc8595150918fb5 631 Pfam PF00204 DNA gyrase B 219 385 1.3E-39 T 15-10-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AM378_15940 66c953bb64b26f7f5dc8595150918fb5 631 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 29 172 1.9E-16 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AM378_15940 66c953bb64b26f7f5dc8595150918fb5 631 SMART SM00433 35 625 1.1E-206 T 15-10-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AM378_15940 66c953bb64b26f7f5dc8595150918fb5 631 Hamap MF_00938 DNA topoisomerase 4 subunit B [parE]. 3 629 47.238 T 15-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AM378_15940 66c953bb64b26f7f5dc8595150918fb5 631 SUPERFAMILY SSF55874 6 216 2.01E-68 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AM378_15940 66c953bb64b26f7f5dc8595150918fb5 631 Gene3D G3DSA:3.30.565.10 3 216 5.3E-76 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AM378_15940 66c953bb64b26f7f5dc8595150918fb5 631 Gene3D G3DSA:3.30.230.10 217 390 2.2E-58 T 15-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AM378_15940 66c953bb64b26f7f5dc8595150918fb5 631 TIGRFAM TIGR01055 parE_Gneg: DNA topoisomerase IV, B subunit 5 626 0.0 T 15-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AM378_15940 66c953bb64b26f7f5dc8595150918fb5 631 ProSitePatterns PS00177 DNA topoisomerase II signature. 417 425 - T 15-10-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AM378_15940 66c953bb64b26f7f5dc8595150918fb5 631 SUPERFAMILY SSF56719 389 622 4.18E-77 T 15-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 AM378_15940 66c953bb64b26f7f5dc8595150918fb5 631 Gene3D G3DSA:3.40.50.670 391 624 4.2E-94 T 15-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AM378_15940 66c953bb64b26f7f5dc8595150918fb5 631 Pfam PF01751 Toprim domain 414 523 3.5E-12 T 15-10-2018 IPR006171 TOPRIM domain AM378_15940 66c953bb64b26f7f5dc8595150918fb5 631 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 557 621 1.4E-23 T 15-10-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 AM378_15940 66c953bb64b26f7f5dc8595150918fb5 631 SUPERFAMILY SSF54211 218 383 8.72E-46 T 15-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AM378_15940 66c953bb64b26f7f5dc8595150918fb5 631 PRINTS PR00418 DNA topoisomerase II family signature 110 124 3.8E-59 T 15-10-2018 AM378_15940 66c953bb64b26f7f5dc8595150918fb5 631 PRINTS PR00418 DNA topoisomerase II family signature 498 515 3.8E-59 T 15-10-2018 AM378_15940 66c953bb64b26f7f5dc8595150918fb5 631 PRINTS PR00418 DNA topoisomerase II family signature 67 80 3.8E-59 T 15-10-2018 AM378_15940 66c953bb64b26f7f5dc8595150918fb5 631 PRINTS PR00418 DNA topoisomerase II family signature 267 280 3.8E-59 T 15-10-2018 AM378_15940 66c953bb64b26f7f5dc8595150918fb5 631 PRINTS PR00418 DNA topoisomerase II family signature 480 496 3.8E-59 T 15-10-2018 AM378_15940 66c953bb64b26f7f5dc8595150918fb5 631 PRINTS PR00418 DNA topoisomerase II family signature 32 47 3.8E-59 T 15-10-2018 AM378_15940 66c953bb64b26f7f5dc8595150918fb5 631 PRINTS PR00418 DNA topoisomerase II family signature 518 530 3.8E-59 T 15-10-2018 AM378_15940 66c953bb64b26f7f5dc8595150918fb5 631 PRINTS PR00418 DNA topoisomerase II family signature 561 577 3.8E-59 T 15-10-2018 AM378_15940 66c953bb64b26f7f5dc8595150918fb5 631 PRINTS PR00418 DNA topoisomerase II family signature 415 429 3.8E-59 T 15-10-2018 AM378_03630 561b43b91ffa7bd9564984040189d62f 321 SMART SM00062 35 266 1.7E-25 T 15-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AM378_03630 561b43b91ffa7bd9564984040189d62f 321 Gene3D G3DSA:3.40.190.10 114 213 4.7E-117 T 15-10-2018 AM378_03630 561b43b91ffa7bd9564984040189d62f 321 TIGRFAM TIGR01728 SsuA_fam: ABC transporter, substrate-binding protein, aliphatic sulfonates family 37 317 7.2E-83 T 15-10-2018 IPR010067 Aliphatic sulfonates-binding protein GO:0016020|GO:0042626 AM378_03630 561b43b91ffa7bd9564984040189d62f 321 Gene3D G3DSA:3.40.190.10 37 311 4.7E-117 T 15-10-2018 AM378_03630 561b43b91ffa7bd9564984040189d62f 321 SUPERFAMILY SSF53850 33 265 1.14E-48 T 15-10-2018 AM378_03630 561b43b91ffa7bd9564984040189d62f 321 Pfam PF09084 NMT1/THI5 like 73 189 4.7E-11 T 15-10-2018 IPR015168 SsuA/THI5-like AM378_03630 561b43b91ffa7bd9564984040189d62f 321 Gene3D G3DSA:1.10.8.450 245 278 4.7E-117 T 15-10-2018 AM378_13380 2e07e1520282d780553e810617807a35 173 TIGRFAM TIGR00714 hscB: Fe-S protein assembly co-chaperone HscB 13 169 1.3E-48 T 15-10-2018 IPR004640 Co-chaperone Hsc20 GO:0001671|GO:0051087|GO:0097428 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 AM378_13380 2e07e1520282d780553e810617807a35 173 Gene3D G3DSA:1.10.287.110 1 79 1.1E-22 T 15-10-2018 IPR036869 Chaperone J-domain superfamily AM378_13380 2e07e1520282d780553e810617807a35 173 SUPERFAMILY SSF46565 1 75 6.67E-18 T 15-10-2018 IPR036869 Chaperone J-domain superfamily AM378_13380 2e07e1520282d780553e810617807a35 173 SUPERFAMILY SSF47144 78 171 1.57E-22 T 15-10-2018 IPR036386 HscB, C-terminal domain superfamily GO:0051259 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 AM378_13380 2e07e1520282d780553e810617807a35 173 Hamap MF_00682 Co-chaperone protein HscB [hscB]. 1 170 24.604 T 15-10-2018 IPR004640 Co-chaperone Hsc20 GO:0001671|GO:0051087|GO:0097428 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 AM378_13380 2e07e1520282d780553e810617807a35 173 Gene3D G3DSA:1.20.1280.20 80 171 1.2E-22 T 15-10-2018 IPR036386 HscB, C-terminal domain superfamily GO:0051259 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 AM378_13380 2e07e1520282d780553e810617807a35 173 Pfam PF07743 HSCB C-terminal oligomerisation domain 88 163 6.6E-15 T 15-10-2018 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain GO:0051259 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 AM378_13380 2e07e1520282d780553e810617807a35 173 SMART SM00271 1 66 4.1E-9 T 15-10-2018 IPR001623 DnaJ domain AM378_03330 08ab67630a67964e4e39778fb918b4ce 573 SUPERFAMILY SSF52518 2 179 1.43E-43 T 15-10-2018 IPR029061 Thiamin diphosphate-binding fold AM378_03330 08ab67630a67964e4e39778fb918b4ce 573 Gene3D G3DSA:3.40.50.970 1 178 4.1E-60 T 15-10-2018 AM378_03330 08ab67630a67964e4e39778fb918b4ce 573 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 417 436 - T 15-10-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 AM378_03330 08ab67630a67964e4e39778fb918b4ce 573 Gene3D G3DSA:3.40.50.970 349 573 5.4E-73 T 15-10-2018 AM378_03330 08ab67630a67964e4e39778fb918b4ce 573 Gene3D G3DSA:3.40.50.1220 179 333 4.3E-51 T 15-10-2018 AM378_03330 08ab67630a67964e4e39778fb918b4ce 573 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 4 170 1.5E-41 T 15-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 AM378_03330 08ab67630a67964e4e39778fb918b4ce 573 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 380 526 1.8E-39 T 15-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 AM378_03330 08ab67630a67964e4e39778fb918b4ce 573 SUPERFAMILY SSF52467 182 351 3.09E-46 T 15-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily AM378_03330 08ab67630a67964e4e39778fb918b4ce 573 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 192 319 2.9E-32 T 15-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 AM378_03330 08ab67630a67964e4e39778fb918b4ce 573 SUPERFAMILY SSF52518 357 558 2.03E-60 T 15-10-2018 IPR029061 Thiamin diphosphate-binding fold AM378_22755 8b4f20b1da24abc500cd2ccd99abb94b 524 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 12 28 - T 15-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 AM378_22755 8b4f20b1da24abc500cd2ccd99abb94b 524 TIGRFAM TIGR00973 leuA_bact: 2-isopropylmalate synthase 4 497 8.7E-256 T 15-10-2018 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 AM378_22755 8b4f20b1da24abc500cd2ccd99abb94b 524 Pfam PF08502 LeuA allosteric (dimerisation) domain 369 499 8.1E-37 T 15-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 AM378_22755 8b4f20b1da24abc500cd2ccd99abb94b 524 Gene3D G3DSA:3.20.20.70 1 277 1.4E-108 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM378_22755 8b4f20b1da24abc500cd2ccd99abb94b 524 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 199 212 - T 15-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 AM378_22755 8b4f20b1da24abc500cd2ccd99abb94b 524 SUPERFAMILY SSF110921 391 499 6.02E-27 T 15-10-2018 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 AM378_22755 8b4f20b1da24abc500cd2ccd99abb94b 524 Hamap MF_01025 2-isopropylmalate synthase [leuA]. 2 509 43.748 T 15-10-2018 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 AM378_22755 8b4f20b1da24abc500cd2ccd99abb94b 524 Gene3D G3DSA:1.10.238.260 280 393 3.4E-33 T 15-10-2018 AM378_22755 8b4f20b1da24abc500cd2ccd99abb94b 524 SUPERFAMILY SSF51569 1 291 2.93E-101 T 15-10-2018 AM378_22755 8b4f20b1da24abc500cd2ccd99abb94b 524 Pfam PF00682 HMGL-like 4 273 2.8E-107 T 15-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 AM378_22755 8b4f20b1da24abc500cd2ccd99abb94b 524 Gene3D G3DSA:3.30.160.270 395 501 7.1E-12 T 15-10-2018 AM378_22755 8b4f20b1da24abc500cd2ccd99abb94b 524 SMART SM00917 369 500 2.4E-40 T 15-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 AM378_13915 9911e94bf818667b82ca4d478a65d5c5 393 Gene3D G3DSA:1.20.1250.20 6 387 1.7E-39 T 15-10-2018 AM378_13915 9911e94bf818667b82ca4d478a65d5c5 393 Hamap MF_01118 Uncharacterized MFS-type transporter YhhS [yhhS]. 1 390 42.897 T 15-10-2018 IPR023008 Uncharacterized MFS-type transporter YhhS-like AM378_13915 9911e94bf818667b82ca4d478a65d5c5 393 SUPERFAMILY SSF103473 6 389 8.76E-48 T 15-10-2018 IPR036259 MFS transporter superfamily AM378_13915 9911e94bf818667b82ca4d478a65d5c5 393 Pfam PF07690 Major Facilitator Superfamily 18 258 1.7E-14 T 15-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM378_02805 c036edf5befab2b6f85d56525fae1d46 590 TIGRFAM TIGR01842 type_I_sec_PrtD: type I secretion system ATPase 18 557 3.8E-237 T 15-10-2018 IPR010128 ATPase, type I secretion system, PrtD GO:0005524|GO:0008565|GO:0016021|GO:0030253|GO:0030256 AM378_02805 c036edf5befab2b6f85d56525fae1d46 590 Gene3D G3DSA:1.20.1560.10 8 317 2.9E-41 T 15-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 AM378_02805 c036edf5befab2b6f85d56525fae1d46 590 Gene3D G3DSA:3.40.50.300 324 572 1.4E-66 T 15-10-2018 AM378_02805 c036edf5befab2b6f85d56525fae1d46 590 ProSitePatterns PS00211 ABC transporters family signature. 468 482 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM378_02805 c036edf5befab2b6f85d56525fae1d46 590 SUPERFAMILY SSF52540 322 555 1.23E-63 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_02805 c036edf5befab2b6f85d56525fae1d46 590 SMART SM00382 357 543 2.9E-13 T 15-10-2018 IPR003593 AAA+ ATPase domain AM378_02805 c036edf5befab2b6f85d56525fae1d46 590 Pfam PF00664 ABC transporter transmembrane region 24 280 1.0E-14 T 15-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 AM378_02805 c036edf5befab2b6f85d56525fae1d46 590 Pfam PF00005 ABC transporter 348 495 2.4E-28 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM378_02805 c036edf5befab2b6f85d56525fae1d46 590 SUPERFAMILY SSF90123 12 315 6.93E-46 T 15-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 AM378_06820 cf651e93855b62770a9e85fd09275a70 488 Gene3D G3DSA:3.40.309.10 254 444 4.5E-171 T 15-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 AM378_06820 cf651e93855b62770a9e85fd09275a70 488 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 275 286 - T 15-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 AM378_06820 cf651e93855b62770a9e85fd09275a70 488 Pfam PF00171 Aldehyde dehydrogenase family 16 472 9.1E-167 T 15-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 AM378_06820 cf651e93855b62770a9e85fd09275a70 488 SUPERFAMILY SSF53720 3 477 1.07E-159 T 15-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 AM378_06820 cf651e93855b62770a9e85fd09275a70 488 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 247 254 - T 15-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 AM378_06820 cf651e93855b62770a9e85fd09275a70 488 Gene3D G3DSA:3.40.605.10 17 472 4.5E-171 T 15-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 AM378_19805 e0fa263ebd7ab22380b720e5b3ca7d72 620 TIGRFAM TIGR00830 PTBA: PTS system, glucose subfamily, IIA component 474 594 2.2E-47 T 15-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 AM378_19805 e0fa263ebd7ab22380b720e5b3ca7d72 620 ProSitePatterns PS00371 PTS EIIA domains phosphorylation site signature 1. 536 548 - T 15-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 AM378_19805 e0fa263ebd7ab22380b720e5b3ca7d72 620 SUPERFAMILY SSF55604 6 79 1.44E-19 T 15-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 AM378_19805 e0fa263ebd7ab22380b720e5b3ca7d72 620 TIGRFAM TIGR01995 PTS-II-ABC-beta: PTS system, beta-glucoside-specific IIABC component 3 618 1.0E-216 T 15-10-2018 IPR011297 Phosphotransferase system, beta-glucoside-specific IIABC component GO:0005886|GO:0008982|GO:0009401 AM378_19805 e0fa263ebd7ab22380b720e5b3ca7d72 620 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 473 598 6.8E-51 T 15-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 AM378_19805 e0fa263ebd7ab22380b720e5b3ca7d72 620 Pfam PF02378 Phosphotransferase system, EIIC 108 392 2.4E-25 T 15-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 AM378_19805 e0fa263ebd7ab22380b720e5b3ca7d72 620 Gene3D G3DSA:2.70.70.10 463 616 5.8E-55 T 15-10-2018 IPR011055 Duplicated hybrid motif AM378_19805 e0fa263ebd7ab22380b720e5b3ca7d72 620 Gene3D G3DSA:3.30.1360.60 1 77 2.2E-25 T 15-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 AM378_19805 e0fa263ebd7ab22380b720e5b3ca7d72 620 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 19 36 - T 15-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 AM378_19805 e0fa263ebd7ab22380b720e5b3ca7d72 620 Pfam PF00367 phosphotransferase system, EIIB 9 41 2.4E-13 T 15-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 AM378_19805 e0fa263ebd7ab22380b720e5b3ca7d72 620 SUPERFAMILY SSF51261 469 610 9.24E-52 T 15-10-2018 IPR011055 Duplicated hybrid motif AM378_15590 75d400107f0566fdde00797ee08f4a81 273 ProSitePatterns PS00521 Delta 1-pyrroline-5-carboxylate reductase signature. 224 247 - T 15-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 AM378_15590 75d400107f0566fdde00797ee08f4a81 273 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 164 269 5.8E-30 T 15-10-2018 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 AM378_15590 75d400107f0566fdde00797ee08f4a81 273 SUPERFAMILY SSF48179 163 271 1.19E-29 T 15-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 AM378_15590 75d400107f0566fdde00797ee08f4a81 273 TIGRFAM TIGR00112 proC: pyrroline-5-carboxylate reductase 6 269 1.2E-74 T 15-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 AM378_15590 75d400107f0566fdde00797ee08f4a81 273 PIRSF PIRSF000193 3 271 3.1E-74 T 15-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 AM378_15590 75d400107f0566fdde00797ee08f4a81 273 SUPERFAMILY SSF51735 4 162 1.07E-38 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily AM378_15590 75d400107f0566fdde00797ee08f4a81 273 Gene3D G3DSA:1.10.3730.10 166 273 4.7E-35 T 15-10-2018 AM378_15590 75d400107f0566fdde00797ee08f4a81 273 Hamap MF_01925 Pyrroline-5-carboxylate reductase [proC]. 4 269 24.946 T 15-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 AM378_15590 75d400107f0566fdde00797ee08f4a81 273 Gene3D G3DSA:3.40.50.720 2 165 5.5E-50 T 15-10-2018 AM378_15590 75d400107f0566fdde00797ee08f4a81 273 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 5 100 7.2E-21 T 15-10-2018 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal AM378_10825 cd2f2a1a302d59e7e4fa5a18ff40aa61 501 Gene3D G3DSA:3.40.1080.10 3 230 9.3E-93 T 15-10-2018 AM378_10825 cd2f2a1a302d59e7e4fa5a18ff40aa61 501 SUPERFAMILY SSF100950 233 498 9.77E-60 T 15-10-2018 IPR037171 NagB/RpiA transferase-like AM378_10825 cd2f2a1a302d59e7e4fa5a18ff40aa61 501 TIGRFAM TIGR01584 citF: citrate lyase, alpha subunit 23 501 9.4E-236 T 15-10-2018 IPR006472 Citrate lyase, alpha subunit GO:0005737|GO:0006084|GO:0008814|GO:0009346 MetaCyc: PWY-6038 AM378_10825 cd2f2a1a302d59e7e4fa5a18ff40aa61 501 PIRSF PIRSF009451 1 501 2.5E-255 T 15-10-2018 IPR006472 Citrate lyase, alpha subunit GO:0005737|GO:0006084|GO:0008814|GO:0009346 MetaCyc: PWY-6038 AM378_10825 cd2f2a1a302d59e7e4fa5a18ff40aa61 501 Pfam PF04223 Citrate lyase, alpha subunit (CitF) 35 499 2.8E-255 T 15-10-2018 IPR006472 Citrate lyase, alpha subunit GO:0005737|GO:0006084|GO:0008814|GO:0009346 MetaCyc: PWY-6038 AM378_10825 cd2f2a1a302d59e7e4fa5a18ff40aa61 501 SUPERFAMILY SSF100950 19 229 2.51E-73 T 15-10-2018 IPR037171 NagB/RpiA transferase-like AM378_10825 cd2f2a1a302d59e7e4fa5a18ff40aa61 501 Gene3D G3DSA:3.40.1080.10 232 500 2.9E-122 T 15-10-2018 AM378_06785 c2d0aacf239716a67116904b05d91811 104 Pfam PF02974 Protease inhibitor Inh 8 93 4.7E-18 T 15-10-2018 IPR021140 Alkaline proteinase inhibitor/ Outer membrane lipoprotein Omp19 AM378_06785 c2d0aacf239716a67116904b05d91811 104 Gene3D G3DSA:2.40.128.10 3 104 1.7E-31 T 15-10-2018 AM378_06785 c2d0aacf239716a67116904b05d91811 104 ProDom PD015804 INHIBITOR PROTEASE METALLOPROTEASE PROTEINASE PRECURSOR SIGNAL PERIPLASMIC METALLOENZYME ALKALINE PRTA-SPECIFIC 13 92 1.0E-11 T 15-10-2018 IPR003086 Metalloprotease inhibitor I38 GO:0004866|GO:0030288 AM378_06785 c2d0aacf239716a67116904b05d91811 104 PRINTS PR01274 Metalloprotease inhibitor signature 65 78 1.1E-8 T 15-10-2018 IPR022815 Protease inhibitor I38 AM378_06785 c2d0aacf239716a67116904b05d91811 104 PRINTS PR01274 Metalloprotease inhibitor signature 3 19 1.1E-8 T 15-10-2018 IPR022815 Protease inhibitor I38 AM378_06785 c2d0aacf239716a67116904b05d91811 104 SUPERFAMILY SSF50882 3 102 4.97E-22 T 15-10-2018 IPR016085 Protease inhibitor, beta-barrel domain GO:0004866 AM378_04315 8befde392ebf4be5b86f1e0aeb60b3b1 193 PIRSF PIRSF006305 1 192 3.5E-42 T 15-10-2018 IPR003697 Maf-like protein GO:0047429 AM378_04315 8befde392ebf4be5b86f1e0aeb60b3b1 193 Hamap MF_00528 Septum formation protein Maf [maf]. 3 191 29.763 T 15-10-2018 IPR003697 Maf-like protein GO:0047429 AM378_04315 8befde392ebf4be5b86f1e0aeb60b3b1 193 SUPERFAMILY SSF52972 2 185 3.2E-57 T 15-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like AM378_04315 8befde392ebf4be5b86f1e0aeb60b3b1 193 Pfam PF02545 Maf-like protein 3 185 2.6E-45 T 15-10-2018 IPR003697 Maf-like protein GO:0047429 AM378_04315 8befde392ebf4be5b86f1e0aeb60b3b1 193 Gene3D G3DSA:3.90.950.10 2 193 1.6E-61 T 15-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like AM378_04315 8befde392ebf4be5b86f1e0aeb60b3b1 193 TIGRFAM TIGR00172 maf: septum formation protein Maf 3 185 5.0E-58 T 15-10-2018 IPR003697 Maf-like protein GO:0047429 AM378_09200 0c670e9f4c4adc48235843e180522ba9 594 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 500 586 2.4E-7 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AM378_09200 0c670e9f4c4adc48235843e180522ba9 594 Gene3D G3DSA:1.20.120.960 41 147 1.2E-36 T 15-10-2018 AM378_09200 0c670e9f4c4adc48235843e180522ba9 594 SUPERFAMILY SSF158472 175 225 2.88E-6 T 15-10-2018 AM378_09200 0c670e9f4c4adc48235843e180522ba9 594 Gene3D G3DSA:3.30.565.10 457 590 6.8E-27 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AM378_09200 0c670e9f4c4adc48235843e180522ba9 594 SMART SM00387 497 590 4.0E-9 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AM378_09200 0c670e9f4c4adc48235843e180522ba9 594 Pfam PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term 34 124 1.2E-9 T 15-10-2018 IPR029095 NarX-like, N-terminal AM378_09200 0c670e9f4c4adc48235843e180522ba9 594 Gene3D G3DSA:1.10.287.130 172 291 2.3E-6 T 15-10-2018 AM378_09200 0c670e9f4c4adc48235843e180522ba9 594 PIRSF PIRSF003167 1 594 3.0E-189 T 15-10-2018 IPR016380 Signal transduction histidine kinase, nitrate/nitrite-sensing GO:0000155|GO:0000160|GO:0004673|GO:0016021 AM378_09200 0c670e9f4c4adc48235843e180522ba9 594 SMART SM00304 175 228 4.5E-12 T 15-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AM378_09200 0c670e9f4c4adc48235843e180522ba9 594 SUPERFAMILY SSF55874 464 586 3.67E-17 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AM378_09200 0c670e9f4c4adc48235843e180522ba9 594 Pfam PF00672 HAMP domain 175 224 6.9E-9 T 15-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AM378_09200 0c670e9f4c4adc48235843e180522ba9 594 Pfam PF07730 Histidine kinase 393 456 7.5E-17 T 15-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 AM378_21845 92cf3a609ff4961644fa45f7a36b23be 230 Pfam PF02308 MgtC family 10 131 2.1E-32 T 15-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 AM378_21845 92cf3a609ff4961644fa45f7a36b23be 230 PRINTS PR01837 MgtC/SapB protein signature 32 50 2.2E-39 T 15-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 AM378_21845 92cf3a609ff4961644fa45f7a36b23be 230 PRINTS PR01837 MgtC/SapB protein signature 13 32 2.2E-39 T 15-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 AM378_21845 92cf3a609ff4961644fa45f7a36b23be 230 PRINTS PR01837 MgtC/SapB protein signature 58 80 2.2E-39 T 15-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 AM378_21845 92cf3a609ff4961644fa45f7a36b23be 230 PRINTS PR01837 MgtC/SapB protein signature 85 109 2.2E-39 T 15-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 AM378_16660 72f6577eb6d91ab1520b736a12b93504 95 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 95 5.2E-35 T 15-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 AM378_16660 72f6577eb6d91ab1520b736a12b93504 95 SUPERFAMILY SSF69754 2 95 9.16E-36 T 15-10-2018 IPR036567 Ribosome hibernation promotion factor-like AM378_16660 72f6577eb6d91ab1520b736a12b93504 95 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 3 93 8.2E-29 T 15-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 AM378_16660 72f6577eb6d91ab1520b736a12b93504 95 Gene3D G3DSA:3.30.160.100 1 95 3.6E-39 T 15-10-2018 IPR036567 Ribosome hibernation promotion factor-like AM378_00650 94abe75a42deecd3305edaaa0bcd517e 321 Hamap MF_00206 Lipoyl synthase [lipA]. 1 321 157.396 T 15-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 AM378_00650 94abe75a42deecd3305edaaa0bcd517e 321 TIGRFAM TIGR00510 lipA: lipoyl synthase 21 321 7.8E-161 T 15-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 AM378_00650 94abe75a42deecd3305edaaa0bcd517e 321 SUPERFAMILY SSF102114 52 316 2.35E-67 T 15-10-2018 AM378_00650 94abe75a42deecd3305edaaa0bcd517e 321 Pfam PF04055 Radical SAM superfamily 91 251 1.5E-15 T 15-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AM378_00650 94abe75a42deecd3305edaaa0bcd517e 321 PIRSF PIRSF005963 2 321 3.7E-131 T 15-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 AM378_00650 94abe75a42deecd3305edaaa0bcd517e 321 Gene3D G3DSA:3.20.20.70 82 295 1.3E-20 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM378_00650 94abe75a42deecd3305edaaa0bcd517e 321 Pfam PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family 27 73 6.7E-7 T 15-10-2018 IPR031691 Lipoyl synthase, N-terminal KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 AM378_00650 94abe75a42deecd3305edaaa0bcd517e 321 SMART SM00729 84 293 1.3E-16 T 15-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 AM378_09510 928bdc7fd6f2459f87093d36a5a636df 1323 TIGRFAM TIGR01238 D1pyr5carbox3: delta-1-pyrroline-5-carboxylate dehydrogenase 611 1113 3.9E-249 T 15-10-2018 IPR005933 Delta-1-pyrroline-5-carboxylate dehydrogenase 3 GO:0003842|GO:0006561|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 AM378_09510 928bdc7fd6f2459f87093d36a5a636df 1323 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 883 890 - T 15-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 AM378_09510 928bdc7fd6f2459f87093d36a5a636df 1323 Gene3D G3DSA:1.20.5.550 88 139 1.2E-29 T 15-10-2018 IPR024090 Proline dehydrogenase PutA, domain I GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 AM378_09510 928bdc7fd6f2459f87093d36a5a636df 1323 SUPERFAMILY SSF81935 89 262 3.14E-66 T 15-10-2018 IPR024089 Proline dehydrogenase PutA, domain I/II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 AM378_09510 928bdc7fd6f2459f87093d36a5a636df 1323 Gene3D G3DSA:3.40.309.10 886 1083 6.9E-145 T 15-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 AM378_09510 928bdc7fd6f2459f87093d36a5a636df 1323 Gene3D G3DSA:3.40.605.10 635 1113 6.9E-145 T 15-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 AM378_09510 928bdc7fd6f2459f87093d36a5a636df 1323 Pfam PF14850 DNA-binding domain of Proline dehydrogenase 149 260 1.6E-45 T 15-10-2018 IPR024082 Proline dehydrogenase PutA, domain II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 AM378_09510 928bdc7fd6f2459f87093d36a5a636df 1323 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 911 922 - T 15-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 AM378_09510 928bdc7fd6f2459f87093d36a5a636df 1323 SUPERFAMILY SSF51730 263 619 2.35E-123 T 15-10-2018 IPR029041 FAD-linked oxidoreductase-like AM378_09510 928bdc7fd6f2459f87093d36a5a636df 1323 SUPERFAMILY SSF47598 3 45 1.33E-10 T 15-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 AM378_09510 928bdc7fd6f2459f87093d36a5a636df 1323 PIRSF PIRSF000197 75 1323 0.0 T 15-10-2018 IPR025703 Bifunctional protein PutA GO:0003700|GO:0003842|GO:0004657|GO:0006355|GO:0010133 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 AM378_09510 928bdc7fd6f2459f87093d36a5a636df 1323 Gene3D G3DSA:3.20.20.220 221 611 1.3E-161 T 15-10-2018 AM378_09510 928bdc7fd6f2459f87093d36a5a636df 1323 Gene3D G3DSA:1.10.1220.10 11 52 6.8E-23 T 15-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 AM378_09510 928bdc7fd6f2459f87093d36a5a636df 1323 Pfam PF00171 Aldehyde dehydrogenase family 661 1106 1.2E-114 T 15-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 AM378_09510 928bdc7fd6f2459f87093d36a5a636df 1323 Pfam PF01619 Proline dehydrogenase 271 570 1.6E-99 T 15-10-2018 IPR002872 Proline dehydrogenase domain KEGG: 00330+1.5.5.2|MetaCyc: PWY-5737|MetaCyc: PWY-6922|Reactome: R-HSA-70688 AM378_09510 928bdc7fd6f2459f87093d36a5a636df 1323 SUPERFAMILY SSF53720 632 1111 9.95E-128 T 15-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 AM378_12155 8e1e003e1f857c245ec6dba57b03621c 436 ProSitePatterns PS00737 Thiolases signature 2. 382 398 - T 15-10-2018 IPR020613 Thiolase, conserved site GO:0016747 AM378_12155 8e1e003e1f857c245ec6dba57b03621c 436 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 17 434 1.2E-132 T 15-10-2018 IPR002155 Thiolase GO:0016747 AM378_12155 8e1e003e1f857c245ec6dba57b03621c 436 PIRSF PIRSF000429 9 436 8.6E-125 T 15-10-2018 IPR002155 Thiolase GO:0016747 AM378_12155 8e1e003e1f857c245ec6dba57b03621c 436 Pfam PF00108 Thiolase, N-terminal domain 15 288 5.6E-62 T 15-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 AM378_12155 8e1e003e1f857c245ec6dba57b03621c 436 Gene3D G3DSA:3.40.47.10 8 435 3.8E-116 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 AM378_12155 8e1e003e1f857c245ec6dba57b03621c 436 Hamap MF_01618 3-ketoacyl-CoA thiolase [fadI]. 2 436 70.446 T 15-10-2018 IPR012806 Acetyl-CoA C-acyltransferase FadI GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726 AM378_12155 8e1e003e1f857c245ec6dba57b03621c 436 ProSitePatterns PS00099 Thiolases active site. 417 430 - T 15-10-2018 IPR020610 Thiolase, active site GO:0016747 AM378_12155 8e1e003e1f857c245ec6dba57b03621c 436 SUPERFAMILY SSF53901 296 435 2.24E-32 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 AM378_12155 8e1e003e1f857c245ec6dba57b03621c 436 TIGRFAM TIGR02446 FadI: acetyl-CoA C-acyltransferase FadI 7 436 1.7E-258 T 15-10-2018 IPR012806 Acetyl-CoA C-acyltransferase FadI GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726 AM378_12155 8e1e003e1f857c245ec6dba57b03621c 436 SUPERFAMILY SSF53901 15 295 4.84E-64 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 AM378_12155 8e1e003e1f857c245ec6dba57b03621c 436 Pfam PF02803 Thiolase, C-terminal domain 296 434 2.3E-36 T 15-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 AM378_12155 8e1e003e1f857c245ec6dba57b03621c 436 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 95 113 - T 15-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 AM378_05430 7354fc3d01e92e0ee76a7f4cdbe90179 289 Pfam PF03881 Fructosamine kinase 1 285 8.0E-116 T 15-10-2018 IPR016477 Fructosamine/Ketosamine-3-kinase Reactome: R-HSA-163841 AM378_05430 7354fc3d01e92e0ee76a7f4cdbe90179 289 Gene3D G3DSA:3.30.200.20 1 92 1.5E-19 T 15-10-2018 AM378_05430 7354fc3d01e92e0ee76a7f4cdbe90179 289 Gene3D G3DSA:3.90.1200.10 99 287 3.1E-58 T 15-10-2018 AM378_05430 7354fc3d01e92e0ee76a7f4cdbe90179 289 SUPERFAMILY SSF56112 3 286 6.95E-39 T 15-10-2018 IPR011009 Protein kinase-like domain superfamily AM378_05430 7354fc3d01e92e0ee76a7f4cdbe90179 289 PIRSF PIRSF006221 1 287 9.4E-91 T 15-10-2018 IPR016477 Fructosamine/Ketosamine-3-kinase Reactome: R-HSA-163841 AM378_19640 f97bf027e0f2dd86c6570837a5b5ed2e 803 Pfam PF00384 Molybdopterin oxidoreductase 2 378 1.9E-23 T 15-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM378_19640 f97bf027e0f2dd86c6570837a5b5ed2e 803 Pfam PF01568 Molydopterin dinucleotide binding domain 681 796 2.1E-17 T 15-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 AM378_19640 f97bf027e0f2dd86c6570837a5b5ed2e 803 Gene3D G3DSA:3.40.228.10 547 627 8.4E-29 T 15-10-2018 AM378_19640 f97bf027e0f2dd86c6570837a5b5ed2e 803 TIGRFAM TIGR01553 formate-DH-alph: formate dehydrogenase-N alpha subunit 1 802 0.0 T 15-10-2018 IPR006443 Formate dehydrogenase-N, alpha subunit GO:0008863|GO:0009055|GO:0043546|GO:0045333|GO:0047111 AM378_19640 f97bf027e0f2dd86c6570837a5b5ed2e 803 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 715 742 - T 15-10-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 AM378_19640 f97bf027e0f2dd86c6570837a5b5ed2e 803 SUPERFAMILY SSF53706 1 638 6.81E-234 T 15-10-2018 AM378_19640 f97bf027e0f2dd86c6570837a5b5ed2e 803 SUPERFAMILY SSF50692 617 803 3.11E-44 T 15-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily AM378_19640 f97bf027e0f2dd86c6570837a5b5ed2e 803 Gene3D G3DSA:3.40.228.10 1 272 6.2E-72 T 15-10-2018 AM378_19640 f97bf027e0f2dd86c6570837a5b5ed2e 803 Gene3D G3DSA:2.40.40.20 628 803 2.2E-75 T 15-10-2018 AM378_19640 f97bf027e0f2dd86c6570837a5b5ed2e 803 Gene3D G3DSA:3.40.50.740 299 472 3.0E-60 T 15-10-2018 AM378_00370 2a51593188a3859e04aa876da6327e5d 159 SUPERFAMILY SSF55826 2 155 1.31E-45 T 15-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 AM378_00370 2a51593188a3859e04aa876da6327e5d 159 Pfam PF04073 Aminoacyl-tRNA editing domain 31 146 7.1E-25 T 15-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 AM378_00370 2a51593188a3859e04aa876da6327e5d 159 TIGRFAM TIGR00011 YbaK_EbsC: Cys-tRNA(Pro) deacylase 2 156 9.4E-56 T 15-10-2018 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC AM378_00370 2a51593188a3859e04aa876da6327e5d 159 Gene3D G3DSA:3.90.960.10 1 159 5.7E-64 T 15-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 AM378_00370 2a51593188a3859e04aa876da6327e5d 159 PIRSF PIRSF006181 1 159 3.5E-56 T 15-10-2018 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC AM378_06410 0fb7fc74faeecf8167cf927dcef632dd 152 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 38 46 - T 15-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 AM378_06410 0fb7fc74faeecf8167cf927dcef632dd 152 Gene3D G3DSA:3.10.20.30 1 75 1.2E-27 T 15-10-2018 IPR012675 Beta-grasp domain superfamily AM378_06410 0fb7fc74faeecf8167cf927dcef632dd 152 Gene3D G3DSA:1.10.150.120 78 151 3.5E-24 T 15-10-2018 AM378_06410 0fb7fc74faeecf8167cf927dcef632dd 152 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 5 61 4.3E-6 T 15-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AM378_06410 0fb7fc74faeecf8167cf927dcef632dd 152 Pfam PF01799 [2Fe-2S] binding domain 72 144 2.0E-24 T 15-10-2018 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 AM378_06410 0fb7fc74faeecf8167cf927dcef632dd 152 SUPERFAMILY SSF47741 83 151 2.36E-28 T 15-10-2018 IPR036884 [2Fe-2S]-binding domain superfamily AM378_06410 0fb7fc74faeecf8167cf927dcef632dd 152 SUPERFAMILY SSF54292 2 76 4.46E-25 T 15-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 AM378_02500 65d2fe981a9edaecf5c6520174cf336c 165 Gene3D G3DSA:3.40.50.300 1 165 4.2E-23 T 15-10-2018 AM378_02500 65d2fe981a9edaecf5c6520174cf336c 165 Pfam PF13671 AAA domain 8 150 4.1E-28 T 15-10-2018 AM378_02500 65d2fe981a9edaecf5c6520174cf336c 165 SUPERFAMILY SSF52540 8 149 1.54E-15 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_14480 1c9e3cfb8df4a6e4c1c85a6c3f004844 118 Pfam PF12528 Type II secretion prepilin peptidase dependent protein C 37 115 7.7E-27 T 15-10-2018 IPR022204 Prepilin peptidase dependent protein C AM378_14480 1c9e3cfb8df4a6e4c1c85a6c3f004844 118 Pfam PF07963 Prokaryotic N-terminal methylation motif 11 35 6.6E-5 T 15-10-2018 IPR012902 Prokaryotic N-terminal methylation site AM378_14480 1c9e3cfb8df4a6e4c1c85a6c3f004844 118 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 12 34 1.7E-4 T 15-10-2018 IPR012902 Prokaryotic N-terminal methylation site AM378_01095 8c0f7f1a0e6f658c2b06590a19fe2160 430 Hamap MF_00671 Tol-Pal system protein TolB [tolB]. 4 426 50.809 T 15-10-2018 IPR014167 Tol-Pal system protein TolB GO:0017038|GO:0042597 AM378_01095 8c0f7f1a0e6f658c2b06590a19fe2160 430 TIGRFAM TIGR02800 propeller_TolB: Tol-Pal system beta propeller repeat protein TolB 15 427 3.4E-163 T 15-10-2018 IPR014167 Tol-Pal system protein TolB GO:0017038|GO:0042597 AM378_01095 8c0f7f1a0e6f658c2b06590a19fe2160 430 Pfam PF07676 WD40-like Beta Propeller Repeat 281 315 9.6E-13 T 15-10-2018 IPR011659 WD40-like Beta Propeller AM378_01095 8c0f7f1a0e6f658c2b06590a19fe2160 430 Pfam PF07676 WD40-like Beta Propeller Repeat 237 272 1.7E-9 T 15-10-2018 IPR011659 WD40-like Beta Propeller AM378_01095 8c0f7f1a0e6f658c2b06590a19fe2160 430 Pfam PF07676 WD40-like Beta Propeller Repeat 199 223 4.3E-5 T 15-10-2018 IPR011659 WD40-like Beta Propeller AM378_01095 8c0f7f1a0e6f658c2b06590a19fe2160 430 Pfam PF07676 WD40-like Beta Propeller Repeat 369 398 0.0011 T 15-10-2018 IPR011659 WD40-like Beta Propeller AM378_01095 8c0f7f1a0e6f658c2b06590a19fe2160 430 SUPERFAMILY SSF69304 155 428 2.09E-55 T 15-10-2018 AM378_01095 8c0f7f1a0e6f658c2b06590a19fe2160 430 Pfam PF04052 TolB amino-terminal domain 23 122 2.0E-32 T 15-10-2018 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 AM378_01095 8c0f7f1a0e6f658c2b06590a19fe2160 430 Gene3D G3DSA:2.120.10.30 165 430 5.5E-115 T 15-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like AM378_01095 8c0f7f1a0e6f658c2b06590a19fe2160 430 Gene3D G3DSA:3.40.50.10070 22 164 1.2E-52 T 15-10-2018 IPR036752 TolB, N-terminal domain superfamily GO:0015031|GO:0042597 AM378_01095 8c0f7f1a0e6f658c2b06590a19fe2160 430 SUPERFAMILY SSF52964 28 161 2.48E-40 T 15-10-2018 AM378_16410 443ad6a909a82e01c9d883e84a7e3fef 258 Gene3D G3DSA:1.20.120.530 95 232 1.4E-20 T 15-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AM378_16410 443ad6a909a82e01c9d883e84a7e3fef 258 SMART SM00345 13 72 6.6E-25 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM378_16410 443ad6a909a82e01c9d883e84a7e3fef 258 SUPERFAMILY SSF48008 94 228 2.07E-21 T 15-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AM378_16410 443ad6a909a82e01c9d883e84a7e3fef 258 SUPERFAMILY SSF46785 2 76 1.18E-22 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM378_16410 443ad6a909a82e01c9d883e84a7e3fef 258 Gene3D G3DSA:1.10.10.10 3 82 4.2E-24 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_16410 443ad6a909a82e01c9d883e84a7e3fef 258 SMART SM00895 96 220 1.2E-15 T 15-10-2018 IPR011711 GntR, C-terminal AM378_16410 443ad6a909a82e01c9d883e84a7e3fef 258 Pfam PF00392 Bacterial regulatory proteins, gntR family 9 72 2.3E-23 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM378_16410 443ad6a909a82e01c9d883e84a7e3fef 258 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 46 62 5.3E-9 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM378_16410 443ad6a909a82e01c9d883e84a7e3fef 258 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 32 46 5.3E-9 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM378_16410 443ad6a909a82e01c9d883e84a7e3fef 258 Pfam PF07729 FCD domain 96 219 5.0E-18 T 15-10-2018 IPR011711 GntR, C-terminal AM378_21590 d1f401e4a4adefc8944637e62b3d7556 315 Gene3D G3DSA:3.40.50.2300 163 279 8.1E-67 T 15-10-2018 AM378_21590 d1f401e4a4adefc8944637e62b3d7556 315 Gene3D G3DSA:3.40.50.2300 68 302 8.1E-67 T 15-10-2018 AM378_21590 d1f401e4a4adefc8944637e62b3d7556 315 SUPERFAMILY SSF53822 63 314 2.52E-60 T 15-10-2018 IPR028082 Periplasmic binding protein-like I AM378_21590 d1f401e4a4adefc8944637e62b3d7556 315 Pfam PF13377 Periplasmic binding protein-like domain 168 310 4.6E-17 T 15-10-2018 AM378_21590 d1f401e4a4adefc8944637e62b3d7556 315 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 6 16 6.2E-6 T 15-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM378_21590 d1f401e4a4adefc8944637e62b3d7556 315 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 16 26 6.2E-6 T 15-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM378_21590 d1f401e4a4adefc8944637e62b3d7556 315 SUPERFAMILY SSF47413 3 60 1.19E-16 T 15-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AM378_21590 d1f401e4a4adefc8944637e62b3d7556 315 TIGRFAM TIGR02405 trehalos_R_Ecol: trehalose operon repressor 4 314 2.2E-149 T 15-10-2018 IPR012771 Trehalose operon repressor GO:0003677|GO:0005991|GO:0045892 AM378_21590 d1f401e4a4adefc8944637e62b3d7556 315 Pfam PF00356 Bacterial regulatory proteins, lacI family 6 51 8.8E-21 T 15-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM378_21590 d1f401e4a4adefc8944637e62b3d7556 315 Gene3D G3DSA:1.10.260.40 1 61 2.7E-21 T 15-10-2018 AM378_21590 d1f401e4a4adefc8944637e62b3d7556 315 SMART SM00354 4 74 2.0E-33 T 15-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM378_21590 d1f401e4a4adefc8944637e62b3d7556 315 ProSitePatterns PS00356 LacI-type HTH domain signature. 7 25 - T 15-10-2018 AM378_08165 8a4d0a1344fff9dc70d2a9ac9ed9e90e 98 Gene3D G3DSA:3.30.70.1060 1 98 5.5E-39 T 15-10-2018 AM378_08165 8a4d0a1344fff9dc70d2a9ac9ed9e90e 98 SUPERFAMILY SSF54909 1 98 3.22E-32 T 15-10-2018 IPR011008 Dimeric alpha-beta barrel AM378_08165 8a4d0a1344fff9dc70d2a9ac9ed9e90e 98 Pfam PF03795 YCII-related domain 1 95 6.4E-30 T 15-10-2018 IPR005545 YCII-related AM378_20835 3153037cbff9b02dc79a5bf46b12c6b0 418 Gene3D G3DSA:1.20.1250.20 13 403 3.2E-35 T 15-10-2018 AM378_20835 3153037cbff9b02dc79a5bf46b12c6b0 418 Pfam PF05977 Transmembrane secretion effector 17 403 1.5E-18 T 15-10-2018 IPR010290 Transmembrane secretion effector AM378_20835 3153037cbff9b02dc79a5bf46b12c6b0 418 SUPERFAMILY SSF103473 17 408 1.96E-40 T 15-10-2018 IPR036259 MFS transporter superfamily AM378_21380 75d941ec7f67c9341a5d2475c607a116 294 SUPERFAMILY SSF48452 27 283 1.61E-75 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AM378_21380 75d941ec7f67c9341a5d2475c607a116 294 Gene3D G3DSA:1.25.40.10 20 294 1.2E-118 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AM378_21380 75d941ec7f67c9341a5d2475c607a116 294 SMART SM00028 96 129 2.0E-4 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AM378_21380 75d941ec7f67c9341a5d2475c607a116 294 SMART SM00028 62 95 0.0033 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AM378_21380 75d941ec7f67c9341a5d2475c607a116 294 PIRSF PIRSF004654 1 292 6.9E-117 T 15-10-2018 IPR023605 Lipoprotein NlpI AM378_21380 75d941ec7f67c9341a5d2475c607a116 294 Pfam PF13181 Tetratricopeptide repeat 62 94 0.033 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AM378_21380 75d941ec7f67c9341a5d2475c607a116 294 Pfam PF07719 Tetratricopeptide repeat 96 129 5.3E-5 T 15-10-2018 IPR013105 Tetratricopeptide repeat 2 AM378_20480 b3a95525a4a44061f7625125b6c0a23a 162 SMART SM00739 109 136 0.0097 T 15-10-2018 IPR005824 KOW AM378_20480 b3a95525a4a44061f7625125b6c0a23a 162 SMART SM00738 1 100 8.1E-31 T 15-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 AM378_20480 b3a95525a4a44061f7625125b6c0a23a 162 Gene3D G3DSA:3.30.70.940 1 162 1.9E-58 T 15-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 AM378_20480 b3a95525a4a44061f7625125b6c0a23a 162 Hamap MF_00951 Transcription antitermination protein RfaH [rfaH]. 1 162 47.019 T 15-10-2018 IPR010215 Transcription antitermination protein RfaH GO:0006355 AM378_20480 b3a95525a4a44061f7625125b6c0a23a 162 SUPERFAMILY SSF82679 2 101 2.62E-27 T 15-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 AM378_20480 b3a95525a4a44061f7625125b6c0a23a 162 TIGRFAM TIGR01955 RfaH: transcription elongation factor/antiterminator RfaH 4 159 3.6E-62 T 15-10-2018 IPR010215 Transcription antitermination protein RfaH GO:0006355 AM378_20480 b3a95525a4a44061f7625125b6c0a23a 162 Pfam PF02357 Transcription termination factor nusG 3 96 1.1E-17 T 15-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 AM378_08440 b37546e1c9b997c49449eed12f29034a 331 Gene3D G3DSA:3.40.50.720 4 326 1.7E-156 T 15-10-2018 AM378_08440 b37546e1c9b997c49449eed12f29034a 331 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 155 312 1.6E-71 T 15-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM378_08440 b37546e1c9b997c49449eed12f29034a 331 SMART SM00846 3 150 5.7E-96 T 15-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM378_08440 b37546e1c9b997c49449eed12f29034a 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 268 283 2.9E-47 T 15-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM378_08440 b37546e1c9b997c49449eed12f29034a 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 144 162 2.9E-47 T 15-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM378_08440 b37546e1c9b997c49449eed12f29034a 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 171 187 2.9E-47 T 15-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM378_08440 b37546e1c9b997c49449eed12f29034a 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 109 122 2.9E-47 T 15-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM378_08440 b37546e1c9b997c49449eed12f29034a 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 228 245 2.9E-47 T 15-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM378_08440 b37546e1c9b997c49449eed12f29034a 331 PIRSF PIRSF000149 1 331 1.4E-135 T 15-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM378_08440 b37546e1c9b997c49449eed12f29034a 331 SUPERFAMILY SSF55347 149 312 3.12E-81 T 15-10-2018 AM378_08440 b37546e1c9b997c49449eed12f29034a 331 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 102 1.4E-41 T 15-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM378_08440 b37546e1c9b997c49449eed12f29034a 331 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 324 1.2E-134 T 15-10-2018 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM378_08440 b37546e1c9b997c49449eed12f29034a 331 Gene3D G3DSA:3.30.360.10 149 314 1.7E-156 T 15-10-2018 AM378_08440 b37546e1c9b997c49449eed12f29034a 331 SUPERFAMILY SSF51735 3 166 1.3E-67 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily AM378_08440 b37546e1c9b997c49449eed12f29034a 331 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 148 155 - T 15-10-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM378_06315 6b024e04b7538870ae8f223acb2c6c92 209 Pfam PF00857 Isochorismatase family 24 197 4.2E-32 T 15-10-2018 IPR000868 Isochorismatase-like GO:0003824 AM378_06315 6b024e04b7538870ae8f223acb2c6c92 209 Gene3D G3DSA:3.40.50.850 8 209 1.7E-62 T 15-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 AM378_06315 6b024e04b7538870ae8f223acb2c6c92 209 SUPERFAMILY SSF52499 16 207 8.11E-48 T 15-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 AM378_18375 0724c6af6a6297acbc0965f50000e8d9 680 SUPERFAMILY SSF55486 1 677 2.41E-210 T 15-10-2018 AM378_18375 0724c6af6a6297acbc0965f50000e8d9 680 Gene3D G3DSA:1.10.1370.10 140 610 9.7E-267 T 15-10-2018 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 AM378_18375 0724c6af6a6297acbc0965f50000e8d9 680 Pfam PF01432 Peptidase family M3 222 677 2.2E-166 T 15-10-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 AM378_18375 0724c6af6a6297acbc0965f50000e8d9 680 Gene3D G3DSA:1.10.1370.40 13 675 9.7E-267 T 15-10-2018 AM378_18035 1648de709c8bbf93fb17bc3adf2ec27e 502 ProSitePatterns PS00977 FAD-dependent glycerol-3-phosphate dehydrogenase signature 1. 9 26 - T 15-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 AM378_18035 1648de709c8bbf93fb17bc3adf2ec27e 502 SUPERFAMILY SSF51905 3 375 1.78E-36 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AM378_18035 1648de709c8bbf93fb17bc3adf2ec27e 502 Pfam PF01266 FAD dependent oxidoreductase 5 323 4.2E-49 T 15-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 AM378_18035 1648de709c8bbf93fb17bc3adf2ec27e 502 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 4 16 4.7E-28 T 15-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 AM378_18035 1648de709c8bbf93fb17bc3adf2ec27e 502 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 33 45 4.7E-28 T 15-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 AM378_18035 1648de709c8bbf93fb17bc3adf2ec27e 502 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 17 27 4.7E-28 T 15-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 AM378_18035 1648de709c8bbf93fb17bc3adf2ec27e 502 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 347 359 4.7E-28 T 15-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 AM378_18035 1648de709c8bbf93fb17bc3adf2ec27e 502 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 78 90 4.7E-28 T 15-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 AM378_18035 1648de709c8bbf93fb17bc3adf2ec27e 502 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 313 319 4.7E-28 T 15-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 AM378_18035 1648de709c8bbf93fb17bc3adf2ec27e 502 Gene3D G3DSA:1.10.8.870 391 460 9.8E-26 T 15-10-2018 IPR038299 Alpha-glycerophosphate oxidase, C-terminal domain superfamily KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 AM378_18035 1648de709c8bbf93fb17bc3adf2ec27e 502 Gene3D G3DSA:3.50.50.60 5 366 3.5E-147 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AM378_18035 1648de709c8bbf93fb17bc3adf2ec27e 502 Gene3D G3DSA:3.30.9.10 82 320 3.5E-147 T 15-10-2018 AM378_18035 1648de709c8bbf93fb17bc3adf2ec27e 502 SUPERFAMILY SSF54373 226 319 5.89E-8 T 15-10-2018 AM378_18035 1648de709c8bbf93fb17bc3adf2ec27e 502 ProSitePatterns PS00978 FAD-dependent glycerol-3-phosphate dehydrogenase signature 2. 352 362 - T 15-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 AM378_18035 1648de709c8bbf93fb17bc3adf2ec27e 502 Pfam PF16901 C-terminal domain of alpha-glycerophosphate oxidase 381 483 1.2E-10 T 15-10-2018 IPR031656 Alpha-glycerophosphate oxidase, C-terminal KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 AM378_00515 9a156d947badb554ff75bc91cd89ff82 355 SUPERFAMILY SSF56059 79 274 6.72E-59 T 15-10-2018 AM378_00515 9a156d947badb554ff75bc91cd89ff82 355 TIGRFAM TIGR01161 purK: phosphoribosylaminoimidazole carboxylase, ATPase subunit 4 330 3.8E-111 T 15-10-2018 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 AM378_00515 9a156d947badb554ff75bc91cd89ff82 355 Gene3D G3DSA:3.30.470.20 151 355 9.4E-82 T 15-10-2018 AM378_00515 9a156d947badb554ff75bc91cd89ff82 355 Gene3D G3DSA:3.30.1490.20 94 150 2.4E-22 T 15-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 AM378_00515 9a156d947badb554ff75bc91cd89ff82 355 SUPERFAMILY SSF52440 2 74 3.6E-15 T 15-10-2018 IPR016185 Pre-ATP-grasp domain superfamily AM378_00515 9a156d947badb554ff75bc91cd89ff82 355 SUPERFAMILY SSF51246 278 353 2.12E-21 T 15-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 AM378_00515 9a156d947badb554ff75bc91cd89ff82 355 Hamap MF_01928 N5-carboxyaminoimidazole ribonucleotide synthase [purK]. 3 325 33.572 T 15-10-2018 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 AM378_00515 9a156d947badb554ff75bc91cd89ff82 355 Gene3D G3DSA:3.40.50.20 1 70 3.8E-31 T 15-10-2018 AM378_00515 9a156d947badb554ff75bc91cd89ff82 355 Pfam PF02222 ATP-grasp domain 88 254 1.9E-53 T 15-10-2018 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type AM378_23285 92998d7a7f18cc642bed2353aeae9513 520 TIGRFAM TIGR01434 glu_cys_ligase: glutamate--cysteine ligase 6 516 4.8E-258 T 15-10-2018 IPR006334 Glutamate--cysteine ligase, monofunctional GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 AM378_23285 92998d7a7f18cc642bed2353aeae9513 520 Hamap MF_00578 Glutamate--cysteine ligase [gshA]. 1 520 232.352 T 15-10-2018 IPR006334 Glutamate--cysteine ligase, monofunctional GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 AM378_23285 92998d7a7f18cc642bed2353aeae9513 520 Pfam PF04262 Glutamate-cysteine ligase 10 380 1.3E-174 T 15-10-2018 IPR007370 Glutamate--cysteine ligase GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 AM378_23285 92998d7a7f18cc642bed2353aeae9513 520 Gene3D G3DSA:3.30.590.20 18 519 3.0E-193 T 15-10-2018 AM378_23285 92998d7a7f18cc642bed2353aeae9513 520 SUPERFAMILY SSF55931 4 515 2.03E-206 T 15-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 AM378_08550 01d397684c7ec7529d407a800868ea2a 148 Hamap MF_00676 UPF0260 protein YcgN [ycgN]. 2 145 40.389 T 15-10-2018 IPR008228 Uncharacterised conserved protein UCP006173 AM378_08550 01d397684c7ec7529d407a800868ea2a 148 Pfam PF03692 Putative zinc- or iron-chelating domain 24 92 2.9E-7 T 15-10-2018 IPR005358 Putative zinc- or iron-chelating domain containing protein AM378_08550 01d397684c7ec7529d407a800868ea2a 148 PIRSF PIRSF006173 1 145 3.9E-64 T 15-10-2018 IPR008228 Uncharacterised conserved protein UCP006173 AM378_13275 97e1842832fe2e567b772809f15281ff 788 Pfam PF01055 Glycosyl hydrolases family 31 238 682 5.4E-118 T 15-10-2018 IPR000322 Glycoside hydrolase family 31 GO:0004553|GO:0005975 AM378_13275 97e1842832fe2e567b772809f15281ff 788 Gene3D G3DSA:3.20.20.80 244 627 1.1E-115 T 15-10-2018 AM378_13275 97e1842832fe2e567b772809f15281ff 788 Pfam PF13802 Galactose mutarotase-like 146 213 1.6E-22 T 15-10-2018 IPR025887 Glycoside hydrolase family 31, N-terminal domain AM378_13275 97e1842832fe2e567b772809f15281ff 788 SUPERFAMILY SSF74650 2 243 4.39E-44 T 15-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 AM378_13275 97e1842832fe2e567b772809f15281ff 788 SUPERFAMILY SSF51011 597 678 2.52E-18 T 15-10-2018 AM378_13275 97e1842832fe2e567b772809f15281ff 788 SUPERFAMILY SSF51445 247 594 1.48E-69 T 15-10-2018 IPR017853 Glycoside hydrolase superfamily AM378_13275 97e1842832fe2e567b772809f15281ff 788 Gene3D G3DSA:2.60.40.1760 2 242 5.8E-35 T 15-10-2018 AM378_13275 97e1842832fe2e567b772809f15281ff 788 Gene3D G3DSA:2.60.40.1180 680 781 1.7E-7 T 15-10-2018 IPR013780 Glycosyl hydrolase, all-beta AM378_13275 97e1842832fe2e567b772809f15281ff 788 Gene3D G3DSA:2.60.40.1180 630 679 4.5E-13 T 15-10-2018 IPR013780 Glycosyl hydrolase, all-beta AM378_07830 4279bfe40eef1f05b25b70c867818929 768 SUPERFAMILY SSF50692 639 761 1.06E-20 T 15-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily AM378_07830 4279bfe40eef1f05b25b70c867818929 768 Pfam PF01568 Molydopterin dinucleotide binding domain 645 752 8.3E-14 T 15-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 AM378_07830 4279bfe40eef1f05b25b70c867818929 768 SUPERFAMILY SSF53706 48 630 4.71E-141 T 15-10-2018 AM378_07830 4279bfe40eef1f05b25b70c867818929 768 Pfam PF00384 Molybdopterin oxidoreductase 109 494 4.2E-23 T 15-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM378_07830 4279bfe40eef1f05b25b70c867818929 768 Gene3D G3DSA:3.40.50.740 120 562 8.0E-69 T 15-10-2018 AM378_07830 4279bfe40eef1f05b25b70c867818929 768 Gene3D G3DSA:3.40.228.10 185 412 8.0E-69 T 15-10-2018 AM378_07830 4279bfe40eef1f05b25b70c867818929 768 TIGRFAM TIGR01701 Fdhalpha-like: oxidoreductase alpha (molybdopterin) subunit 14 758 2.3E-281 T 15-10-2018 IPR010046 Oxidoreductase alpha (molybdopterin) subunit GO:0008863|GO:0030151|GO:0051539 AM378_07830 4279bfe40eef1f05b25b70c867818929 768 PIRSF PIRSF000144 1 763 0.0 T 15-10-2018 AM378_07830 4279bfe40eef1f05b25b70c867818929 768 Gene3D G3DSA:2.40.40.20 640 762 1.3E-6 T 15-10-2018 AM378_10085 bb77e47787fee6789e0312c3df05d10b 237 Pfam PF00857 Isochorismatase family 51 228 1.6E-44 T 15-10-2018 IPR000868 Isochorismatase-like GO:0003824 AM378_10085 bb77e47787fee6789e0312c3df05d10b 237 Gene3D G3DSA:3.40.50.850 46 235 2.2E-57 T 15-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 AM378_10085 bb77e47787fee6789e0312c3df05d10b 237 SUPERFAMILY SSF52499 25 232 2.35E-56 T 15-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 AM378_10025 a814c3353647fb2d843ae6f65da32837 642 SUPERFAMILY SSF69255 363 451 2.62E-33 T 15-10-2018 AM378_10025 a814c3353647fb2d843ae6f65da32837 642 SUPERFAMILY SSF69279 187 361 5.27E-47 T 15-10-2018 AM378_10025 a814c3353647fb2d843ae6f65da32837 642 SUPERFAMILY SSF69279 8 183 3.91E-51 T 15-10-2018 AM378_10025 a814c3353647fb2d843ae6f65da32837 642 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 7 522 5.5E-182 T 15-10-2018 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset AM378_10025 a814c3353647fb2d843ae6f65da32837 642 Gene3D G3DSA:3.55.50.10 98 188 4.2E-107 T 15-10-2018 AM378_10025 a814c3353647fb2d843ae6f65da32837 642 SUPERFAMILY SSF69349 441 616 1.26E-34 T 15-10-2018 AM378_10025 a814c3353647fb2d843ae6f65da32837 642 Gene3D G3DSA:2.30.110.50 9 332 4.2E-107 T 15-10-2018 AM378_10025 a814c3353647fb2d843ae6f65da32837 642 Pfam PF05954 Phage late control gene D protein (GPD) 25 330 2.2E-89 T 15-10-2018 AM378_10025 a814c3353647fb2d843ae6f65da32837 642 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 20 504 5.5E-144 T 15-10-2018 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein AM378_10025 a814c3353647fb2d843ae6f65da32837 642 Gene3D G3DSA:3.30.1920.30 224 286 4.2E-107 T 15-10-2018 AM378_10025 a814c3353647fb2d843ae6f65da32837 642 Gene3D G3DSA:2.40.50.230 355 455 3.6E-42 T 15-10-2018 IPR037026 Vgr protein, OB-fold domain superfamily AM378_18170 a9707814fc5668af26418eaacd73f450 225 SMART SM00382 32 214 1.4E-12 T 15-10-2018 IPR003593 AAA+ ATPase domain AM378_18170 a9707814fc5668af26418eaacd73f450 225 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM378_18170 a9707814fc5668af26418eaacd73f450 225 SUPERFAMILY SSF52540 6 212 9.23E-55 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_18170 a9707814fc5668af26418eaacd73f450 225 Gene3D G3DSA:3.40.50.300 4 225 1.5E-60 T 15-10-2018 AM378_18170 a9707814fc5668af26418eaacd73f450 225 Pfam PF00005 ABC transporter 23 166 1.2E-31 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM378_16325 312af65bdc30debf19cedafcee470b33 238 Pfam PF04982 HPP family 58 177 1.6E-39 T 15-10-2018 IPR007065 HPP AM378_09540 0b9757a3276f298a4327fc78d12bc4fc 240 Gene3D G3DSA:1.20.140.160 87 239 5.6E-46 T 15-10-2018 AM378_09540 0b9757a3276f298a4327fc78d12bc4fc 240 Pfam PF04542 Sigma-70 region 2 17 88 6.1E-16 T 15-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 AM378_09540 0b9757a3276f298a4327fc78d12bc4fc 240 SUPERFAMILY SSF88659 89 156 1.53E-15 T 15-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like AM378_09540 0b9757a3276f298a4327fc78d12bc4fc 240 PIRSF PIRSF000770 3 240 1.3E-42 T 15-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AM378_09540 0b9757a3276f298a4327fc78d12bc4fc 240 SUPERFAMILY SSF88946 5 88 3.14E-23 T 15-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 AM378_09540 0b9757a3276f298a4327fc78d12bc4fc 240 Pfam PF04545 Sigma-70, region 4 185 234 7.3E-18 T 15-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 AM378_09540 0b9757a3276f298a4327fc78d12bc4fc 240 Pfam PF04539 Sigma-70 region 3 97 158 4.8E-15 T 15-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 AM378_09540 0b9757a3276f298a4327fc78d12bc4fc 240 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 16 236 9.4E-31 T 15-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 AM378_09540 0b9757a3276f298a4327fc78d12bc4fc 240 PRINTS PR00046 Major sigma-70 factor signature 221 232 1.0E-13 T 15-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AM378_09540 0b9757a3276f298a4327fc78d12bc4fc 240 PRINTS PR00046 Major sigma-70 factor signature 206 221 1.0E-13 T 15-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AM378_09540 0b9757a3276f298a4327fc78d12bc4fc 240 PRINTS PR00046 Major sigma-70 factor signature 43 56 1.0E-13 T 15-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AM378_09540 0b9757a3276f298a4327fc78d12bc4fc 240 PRINTS PR00046 Major sigma-70 factor signature 67 75 1.0E-13 T 15-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AM378_09540 0b9757a3276f298a4327fc78d12bc4fc 240 PRINTS PR00046 Major sigma-70 factor signature 189 201 1.0E-13 T 15-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AM378_09540 0b9757a3276f298a4327fc78d12bc4fc 240 SUPERFAMILY SSF88659 150 238 5.05E-21 T 15-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like AM378_09540 0b9757a3276f298a4327fc78d12bc4fc 240 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 206 232 - T 15-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AM378_09540 0b9757a3276f298a4327fc78d12bc4fc 240 Gene3D G3DSA:1.10.1740.10 4 85 5.9E-27 T 15-10-2018 AM378_09540 0b9757a3276f298a4327fc78d12bc4fc 240 TIGRFAM TIGR02479 FliA_WhiG: RNA polymerase sigma factor, FliA/WhiG family 16 236 5.2E-84 T 15-10-2018 IPR012845 RNA polymerase sigma factor, FliA/WhiG GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 AM378_09540 0b9757a3276f298a4327fc78d12bc4fc 240 Hamap MF_00962 RNA polymerase sigma factor FliA [fliA]. 5 239 61.965 T 15-10-2018 IPR028617 RNA polymerase sigma factor FliA GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 AM378_09540 0b9757a3276f298a4327fc78d12bc4fc 240 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 43 56 - T 15-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AM378_21905 b02102dc4c761c00081b41bb5e5ab116 99 SMART SM00530 31 86 5.8E-9 T 15-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM378_21905 b02102dc4c761c00081b41bb5e5ab116 99 Pfam PF13744 Helix-turn-helix domain 15 87 3.0E-13 T 15-10-2018 IPR039554 HigA2-like, helix-turn-helix domain AM378_21905 b02102dc4c761c00081b41bb5e5ab116 99 SUPERFAMILY SSF47413 19 92 3.75E-16 T 15-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AM378_21905 b02102dc4c761c00081b41bb5e5ab116 99 Gene3D G3DSA:1.10.260.40 10 88 1.9E-12 T 15-10-2018 AM378_18065 a4cf0ddf74e93df2295466f5b2472b0b 367 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 144 353 2.1E-58 T 15-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 AM378_18065 a4cf0ddf74e93df2295466f5b2472b0b 367 SUPERFAMILY SSF51735 1 147 9.85E-54 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily AM378_18065 a4cf0ddf74e93df2295466f5b2472b0b 367 SMART SM00859 3 122 9.0E-25 T 15-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 AM378_18065 a4cf0ddf74e93df2295466f5b2472b0b 367 SUPERFAMILY SSF55347 134 354 3.27E-79 T 15-10-2018 AM378_18065 a4cf0ddf74e93df2295466f5b2472b0b 367 Gene3D G3DSA:3.30.360.10 135 350 9.1E-152 T 15-10-2018 AM378_18065 a4cf0ddf74e93df2295466f5b2472b0b 367 TIGRFAM TIGR01745 asd_gamma: aspartate-semialdehyde dehydrogenase 2 367 6.0E-216 T 15-10-2018 IPR011534 Aspartate-semialdehyde dehydrogenase, gamma-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 AM378_18065 a4cf0ddf74e93df2295466f5b2472b0b 367 ProSitePatterns PS01103 Aspartate-semialdehyde dehydrogenase signature. 261 275 - T 15-10-2018 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site GO:0004073|GO:0006520|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 AM378_18065 a4cf0ddf74e93df2295466f5b2472b0b 367 PIRSF PIRSF000148 1 367 7.7E-69 T 15-10-2018 AM378_18065 a4cf0ddf74e93df2295466f5b2472b0b 367 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 3 121 3.4E-24 T 15-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 AM378_18065 a4cf0ddf74e93df2295466f5b2472b0b 367 Gene3D G3DSA:3.40.50.720 4 356 9.1E-152 T 15-10-2018 AM378_18065 a4cf0ddf74e93df2295466f5b2472b0b 367 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 1 367 34.148 T 15-10-2018 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 AM378_15360 6b381775b34e41d00b17f78ccd078f1a 732 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 715 732 - T 15-10-2018 IPR010917 TonB-dependent receptor, conserved site AM378_15360 6b381775b34e41d00b17f78ccd078f1a 732 Pfam PF00593 TonB dependent receptor 278 731 2.4E-66 T 15-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel AM378_15360 6b381775b34e41d00b17f78ccd078f1a 732 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 90 732 1.3E-156 T 15-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 AM378_15360 6b381775b34e41d00b17f78ccd078f1a 732 Gene3D G3DSA:2.40.170.20 200 732 1.9E-142 T 15-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AM378_15360 6b381775b34e41d00b17f78ccd078f1a 732 Gene3D G3DSA:2.170.130.10 63 199 1.6E-44 T 15-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily AM378_15360 6b381775b34e41d00b17f78ccd078f1a 732 Pfam PF07715 TonB-dependent Receptor Plug Domain 87 189 7.2E-25 T 15-10-2018 IPR012910 TonB-dependent receptor, plug domain AM378_15360 6b381775b34e41d00b17f78ccd078f1a 732 SUPERFAMILY SSF56935 44 732 1.4E-141 T 15-10-2018 AM378_23355 74a0c8de1a91a5199ade8e4124c6ea08 373 Pfam PF01817 Chorismate mutase type II 9 83 1.3E-20 T 15-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 AM378_23355 74a0c8de1a91a5199ade8e4124c6ea08 373 Gene3D G3DSA:1.20.59.10 1 93 1.1E-25 T 15-10-2018 IPR036979 Chorismate mutase domain superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 AM378_23355 74a0c8de1a91a5199ade8e4124c6ea08 373 PIRSF PIRSF001499 1 373 2.8E-184 T 15-10-2018 IPR008244 Bifunctional chorismate mutase/prephenate dehydrogenase T-protein GO:0004106|GO:0005737|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+5.4.99.5+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7303|MetaCyc: PWY-7626 AM378_23355 74a0c8de1a91a5199ade8e4124c6ea08 373 TIGRFAM TIGR01799 CM_T: chorismate mutase 5 87 1.2E-44 T 15-10-2018 IPR011277 Chorismate mutase, T-protein GO:0004106|GO:0005737|GO:0006571|GO:0055114 KEGG: 00400+5.4.99.5+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7303|MetaCyc: PWY-7626 AM378_23355 74a0c8de1a91a5199ade8e4124c6ea08 373 SUPERFAMILY SSF48179 241 366 1.07E-42 T 15-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 AM378_23355 74a0c8de1a91a5199ade8e4124c6ea08 373 SMART SM00830 9 89 4.5E-31 T 15-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 AM378_23355 74a0c8de1a91a5199ade8e4124c6ea08 373 Gene3D G3DSA:1.10.3660.10 248 373 2.4E-52 T 15-10-2018 AM378_23355 74a0c8de1a91a5199ade8e4124c6ea08 373 SUPERFAMILY SSF48600 4 88 4.4E-24 T 15-10-2018 IPR036263 Chorismate mutase type II superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 AM378_23355 74a0c8de1a91a5199ade8e4124c6ea08 373 Pfam PF02153 Prephenate dehydrogenase 138 344 2.8E-31 T 15-10-2018 IPR003099 Prephenate dehydrogenase GO:0004665|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-7303 AM378_23355 74a0c8de1a91a5199ade8e4124c6ea08 373 Gene3D G3DSA:3.40.50.720 99 247 1.2E-19 T 15-10-2018 AM378_23355 74a0c8de1a91a5199ade8e4124c6ea08 373 SUPERFAMILY SSF51735 91 238 2.79E-40 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily AM378_22040 2ce5ccec71b53e1a69a34a4d83529183 252 SUPERFAMILY SSF46894 183 244 6.8E-19 T 15-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AM378_22040 2ce5ccec71b53e1a69a34a4d83529183 252 Pfam PF00196 Bacterial regulatory proteins, luxR family 189 241 2.8E-16 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM378_22040 2ce5ccec71b53e1a69a34a4d83529183 252 SMART SM00421 186 243 2.4E-20 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM378_22040 2ce5ccec71b53e1a69a34a4d83529183 252 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 189 203 2.4E-11 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM378_22040 2ce5ccec71b53e1a69a34a4d83529183 252 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 219 231 2.4E-11 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM378_22040 2ce5ccec71b53e1a69a34a4d83529183 252 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 203 219 2.4E-11 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM378_22040 2ce5ccec71b53e1a69a34a4d83529183 252 ProSitePatterns PS00622 LuxR-type HTH domain signature. 203 230 - T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM378_22040 2ce5ccec71b53e1a69a34a4d83529183 252 Gene3D G3DSA:1.10.10.10 139 251 2.5E-20 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_14775 052b6cbea89090f9b384bfb0382476f5 514 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 58 505 3.4E-146 T 15-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 AM378_14775 052b6cbea89090f9b384bfb0382476f5 514 ProSitePatterns PS01303 BCCT family of transporters signature. 321 330 - T 15-10-2018 IPR018093 BCCT transporter, conserved site AM378_14775 052b6cbea89090f9b384bfb0382476f5 514 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 20 506 5.1E-171 T 15-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 AM378_23090 820119e9bacb1628a8dc4a29421c0b47 302 TIGRFAM TIGR02039 CysD: sulfate adenylyltransferase, small subunit 9 302 2.7E-167 T 15-10-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 AM378_23090 820119e9bacb1628a8dc4a29421c0b47 302 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 29 257 1.4E-65 T 15-10-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824 Reactome: R-HSA-196843 AM378_23090 820119e9bacb1628a8dc4a29421c0b47 302 Gene3D G3DSA:3.40.50.620 7 212 7.5E-66 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM378_23090 820119e9bacb1628a8dc4a29421c0b47 302 Hamap MF_00064 Sulfate adenylyltransferase subunit 2 [cysD]. 4 302 59.065 T 15-10-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 AM378_23090 820119e9bacb1628a8dc4a29421c0b47 302 SUPERFAMILY SSF52402 6 209 5.18E-75 T 15-10-2018 AM378_23090 820119e9bacb1628a8dc4a29421c0b47 302 PIRSF PIRSF002936 1 302 4.0E-156 T 15-10-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 AM378_16155 2a08a152b5f2d8fe5f19f0f2512d6ca7 116 SUPERFAMILY SSF160719 14 114 6.93E-29 T 15-10-2018 AM378_16155 2a08a152b5f2d8fe5f19f0f2512d6ca7 116 Pfam PF04965 Gene 25-like lysozyme 21 105 6.5E-16 T 15-10-2018 IPR007048 GpW/Gp25/anti-adapter protein IraD AM378_16155 2a08a152b5f2d8fe5f19f0f2512d6ca7 116 Gene3D G3DSA:3.10.450.40 6 115 3.3E-20 T 15-10-2018 AM378_24200 599e0914bace53fec9c642d30d3b3552 356 Hamap MF_00113 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [queA]. 1 344 46.972 T 15-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 AM378_24200 599e0914bace53fec9c642d30d3b3552 356 Pfam PF02547 Queuosine biosynthesis protein 4 343 1.4E-131 T 15-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 AM378_24200 599e0914bace53fec9c642d30d3b3552 356 TIGRFAM TIGR00113 queA: S-adenosylmethionine:tRNA ribosyltransferase-isomerase 1 343 4.3E-160 T 15-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 AM378_24200 599e0914bace53fec9c642d30d3b3552 356 Gene3D G3DSA:3.40.1780.10 14 343 7.3E-116 T 15-10-2018 AM378_24200 599e0914bace53fec9c642d30d3b3552 356 SUPERFAMILY SSF111337 1 343 1.7E-136 T 15-10-2018 IPR036100 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA superfamily GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 AM378_24200 599e0914bace53fec9c642d30d3b3552 356 Gene3D G3DSA:2.40.10.240 64 163 7.3E-116 T 15-10-2018 AM378_13395 05aed659cdcc4349b29442a604417868 404 Gene3D G3DSA:3.90.1150.10 5 376 2.9E-171 T 15-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AM378_13395 05aed659cdcc4349b29442a604417868 404 PIRSF PIRSF005572 2 384 3.6E-144 T 15-10-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 AM378_13395 05aed659cdcc4349b29442a604417868 404 Gene3D G3DSA:3.40.640.10 16 262 2.9E-171 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AM378_13395 05aed659cdcc4349b29442a604417868 404 TIGRFAM TIGR02006 IscS: cysteine desulfurase IscS 1 404 2.5E-234 T 15-10-2018 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250|Reactome: R-HSA-1362409|Reactome: R-HSA-947581 AM378_13395 05aed659cdcc4349b29442a604417868 404 Hamap MF_00331 Cysteine desulfurase IscS [iscS]. 1 395 56.088 T 15-10-2018 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250|Reactome: R-HSA-1362409|Reactome: R-HSA-947581 AM378_13395 05aed659cdcc4349b29442a604417868 404 SUPERFAMILY SSF53383 5 390 6.05E-116 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM378_13395 05aed659cdcc4349b29442a604417868 404 Pfam PF00266 Aminotransferase class-V 5 368 1.2E-88 T 15-10-2018 IPR000192 Aminotransferase class V domain AM378_13395 05aed659cdcc4349b29442a604417868 404 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 197 216 - T 15-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site AM378_19700 464145586e887232b0d48d96dd879c45 415 Pfam PF07690 Major Facilitator Superfamily 25 364 8.8E-30 T 15-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM378_19700 464145586e887232b0d48d96dd879c45 415 SUPERFAMILY SSF103473 7 403 3.92E-51 T 15-10-2018 IPR036259 MFS transporter superfamily AM378_19700 464145586e887232b0d48d96dd879c45 415 Gene3D G3DSA:1.20.1720.10 19 397 4.2E-65 T 15-10-2018 AM378_09765 bcaf19e5cf80fe32e6db77c7b602d6e8 692 ProSitePatterns PS00994 Bacterial export FHIPEP family signature. 147 170 - T 15-10-2018 IPR025505 FHIPEP conserved site AM378_09765 bcaf19e5cf80fe32e6db77c7b602d6e8 692 PIRSF PIRSF005419 14 692 4.0E-243 T 15-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AM378_09765 bcaf19e5cf80fe32e6db77c7b602d6e8 692 Pfam PF00771 FHIPEP family 31 681 2.5E-267 T 15-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AM378_09765 bcaf19e5cf80fe32e6db77c7b602d6e8 692 Gene3D G3DSA:1.10.8.540 505 593 2.6E-30 T 15-10-2018 AM378_09765 bcaf19e5cf80fe32e6db77c7b602d6e8 692 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 142 158 3.0E-56 T 15-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AM378_09765 bcaf19e5cf80fe32e6db77c7b602d6e8 692 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 191 208 3.0E-56 T 15-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AM378_09765 bcaf19e5cf80fe32e6db77c7b602d6e8 692 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 75 94 3.0E-56 T 15-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AM378_09765 bcaf19e5cf80fe32e6db77c7b602d6e8 692 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 38 51 3.0E-56 T 15-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AM378_09765 bcaf19e5cf80fe32e6db77c7b602d6e8 692 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 161 179 3.0E-56 T 15-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AM378_09765 bcaf19e5cf80fe32e6db77c7b602d6e8 692 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 242 256 3.0E-56 T 15-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AM378_09765 bcaf19e5cf80fe32e6db77c7b602d6e8 692 TIGRFAM TIGR01398 FlhA: flagellar biosynthesis protein FlhA 22 689 5.9E-279 T 15-10-2018 IPR006301 Flagellar biosynthesis protein FlhA GO:0016021|GO:0044780 AM378_09765 bcaf19e5cf80fe32e6db77c7b602d6e8 692 Gene3D G3DSA:3.40.30.60 361 504 5.8E-50 T 15-10-2018 AM378_09765 bcaf19e5cf80fe32e6db77c7b602d6e8 692 Gene3D G3DSA:1.10.490.80 596 689 2.7E-8 T 15-10-2018 AM378_06165 4d427d57024e72a81cfa7ab76f52c0b1 405 Pfam PF00480 ROK family 94 389 7.1E-51 T 15-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 AM378_06165 4d427d57024e72a81cfa7ab76f52c0b1 405 Gene3D G3DSA:1.10.10.10 2 82 3.8E-23 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_06165 4d427d57024e72a81cfa7ab76f52c0b1 405 SUPERFAMILY SSF46785 12 77 2.83E-16 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM378_06165 4d427d57024e72a81cfa7ab76f52c0b1 405 Gene3D G3DSA:3.30.420.40 209 377 1.2E-93 T 15-10-2018 AM378_06165 4d427d57024e72a81cfa7ab76f52c0b1 405 Gene3D G3DSA:3.30.420.40 91 382 1.2E-93 T 15-10-2018 AM378_06165 4d427d57024e72a81cfa7ab76f52c0b1 405 SUPERFAMILY SSF53067 87 394 6.48E-44 T 15-10-2018 AM378_10915 c0d808280cc4976466bb2fa5e1786b3d 276 SMART SM00646 112 267 4.8E-55 T 15-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 AM378_10915 c0d808280cc4976466bb2fa5e1786b3d 276 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 53 267 9.0E-49 T 15-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 AM378_10915 c0d808280cc4976466bb2fa5e1786b3d 276 Gene3D G3DSA:3.40.630.40 39 276 5.3E-75 T 15-10-2018 AM378_10915 c0d808280cc4976466bb2fa5e1786b3d 276 SUPERFAMILY SSF53187 51 270 9.42E-51 T 15-10-2018 AM378_24245 fd59d2a17d0884a696c844ad42d0ea47 138 Gene3D G3DSA:1.10.940.10 1 138 4.7E-54 T 15-10-2018 IPR035926 NusB-like superfamily AM378_24245 fd59d2a17d0884a696c844ad42d0ea47 138 Hamap MF_00073 Transcription antitermination protein NusB [nusB]. 4 135 24.147 T 15-10-2018 IPR011605 NusB antitermination factor GO:0006353 AM378_24245 fd59d2a17d0884a696c844ad42d0ea47 138 SUPERFAMILY SSF48013 3 136 4.19E-44 T 15-10-2018 IPR035926 NusB-like superfamily AM378_24245 fd59d2a17d0884a696c844ad42d0ea47 138 Pfam PF01029 NusB family 7 131 2.9E-37 T 15-10-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 AM378_24245 fd59d2a17d0884a696c844ad42d0ea47 138 TIGRFAM TIGR01951 nusB: transcription antitermination factor NusB 6 132 3.2E-46 T 15-10-2018 IPR011605 NusB antitermination factor GO:0006353 AM378_01090 ded43e34a4f771fb800509c7b8b0e735 394 Pfam PF06519 TolA C-terminal 298 391 1.9E-35 T 15-10-2018 IPR014161 Tol-Pal system, TolA GO:0005215|GO:0016021|GO:0043213 AM378_01090 ded43e34a4f771fb800509c7b8b0e735 394 TIGRFAM TIGR02794 tolA_full: protein TolA 13 393 2.2E-90 T 15-10-2018 IPR014161 Tol-Pal system, TolA GO:0005215|GO:0016021|GO:0043213 AM378_01090 ded43e34a4f771fb800509c7b8b0e735 394 Gene3D G3DSA:3.30.1150.10 316 387 8.9E-33 T 15-10-2018 AM378_01090 ded43e34a4f771fb800509c7b8b0e735 394 SUPERFAMILY SSF74653 306 394 2.75E-21 T 15-10-2018 AM378_21280 670018413e1f76c57b6e82655ff3f957 353 SMART SM00387 242 351 4.0E-26 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AM378_21280 670018413e1f76c57b6e82655ff3f957 353 SMART SM00304 83 135 0.0091 T 15-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AM378_21280 670018413e1f76c57b6e82655ff3f957 353 Pfam PF00512 His Kinase A (phospho-acceptor) domain 138 194 3.5E-10 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM378_21280 670018413e1f76c57b6e82655ff3f957 353 SUPERFAMILY SSF47384 120 194 1.45E-12 T 15-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AM378_21280 670018413e1f76c57b6e82655ff3f957 353 SUPERFAMILY SSF55874 186 348 2.1E-32 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AM378_21280 670018413e1f76c57b6e82655ff3f957 353 PRINTS PR00344 Bacterial sensor protein C-terminal signature 279 293 6.8E-8 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM378_21280 670018413e1f76c57b6e82655ff3f957 353 PRINTS PR00344 Bacterial sensor protein C-terminal signature 310 328 6.8E-8 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM378_21280 670018413e1f76c57b6e82655ff3f957 353 SMART SM00388 136 196 7.5E-11 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM378_21280 670018413e1f76c57b6e82655ff3f957 353 Gene3D G3DSA:1.10.287.130 87 197 5.5E-19 T 15-10-2018 AM378_21280 670018413e1f76c57b6e82655ff3f957 353 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 242 349 9.0E-18 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AM378_21280 670018413e1f76c57b6e82655ff3f957 353 Gene3D G3DSA:3.30.565.10 204 351 4.6E-29 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AM378_03035 2e0d72648c8b03d368c19c2890c3964b 212 SUPERFAMILY SSF49401 53 212 6.96E-29 T 15-10-2018 IPR008966 Adhesion domain superfamily AM378_03035 2e0d72648c8b03d368c19c2890c3964b 212 Gene3D G3DSA:2.60.40.1090 65 212 1.6E-28 T 15-10-2018 IPR036937 Fimbrial-type adhesion domain superfamily GO:0007155|GO:0009289 AM378_00780 88eb8f65c0575903ff9b51092d5532a6 474 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 151 171 - T 15-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 AM378_00780 88eb8f65c0575903ff9b51092d5532a6 474 SUPERFAMILY SSF102114 127 372 5.76E-60 T 15-10-2018 AM378_00780 88eb8f65c0575903ff9b51092d5532a6 474 Pfam PF04055 Radical SAM superfamily 151 325 1.2E-25 T 15-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AM378_00780 88eb8f65c0575903ff9b51092d5532a6 474 SMART SM00729 147 367 2.4E-58 T 15-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 AM378_00780 88eb8f65c0575903ff9b51092d5532a6 474 Hamap MF_01864 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase [miaB]. 3 440 72.813 T 15-10-2018 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB GO:0005737|GO:0006400|GO:0016740|GO:0051539 AM378_00780 88eb8f65c0575903ff9b51092d5532a6 474 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 4 437 7.4E-152 T 15-10-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 AM378_00780 88eb8f65c0575903ff9b51092d5532a6 474 Gene3D G3DSA:3.80.30.20 145 378 1.3E-80 T 15-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe AM378_00780 88eb8f65c0575903ff9b51092d5532a6 474 Pfam PF00919 Uncharacterized protein family UPF0004 4 104 7.0E-28 T 15-10-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 AM378_00780 88eb8f65c0575903ff9b51092d5532a6 474 Gene3D G3DSA:3.40.50.12160 3 136 1.8E-31 T 15-10-2018 IPR038135 Methylthiotransferase, N-terminal domain superfamily AM378_00780 88eb8f65c0575903ff9b51092d5532a6 474 TIGRFAM TIGR01574 miaB-methiolase: tRNA-i(6)A37 thiotransferase enzyme MiaB 4 440 1.5E-204 T 15-10-2018 AM378_00780 88eb8f65c0575903ff9b51092d5532a6 474 Pfam PF01938 TRAM domain 378 440 4.4E-17 T 15-10-2018 IPR002792 TRAM domain AM378_23645 9160ea16739998f1e871f00bd6f745a3 419 Hamap MF_00412 Gamma-glutamyl phosphate reductase [proA]. 3 418 40.894 T 15-10-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 AM378_23645 9160ea16739998f1e871f00bd6f745a3 419 Gene3D G3DSA:3.40.605.10 16 413 3.2E-161 T 15-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 AM378_23645 9160ea16739998f1e871f00bd6f745a3 419 Pfam PF00171 Aldehyde dehydrogenase family 5 282 5.8E-14 T 15-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 AM378_23645 9160ea16739998f1e871f00bd6f745a3 419 Gene3D G3DSA:3.40.309.10 224 376 3.2E-161 T 15-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 AM378_23645 9160ea16739998f1e871f00bd6f745a3 419 SUPERFAMILY SSF53720 3 414 1.44E-114 T 15-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 AM378_23645 9160ea16739998f1e871f00bd6f745a3 419 PIRSF PIRSF000151 1 419 2.5E-172 T 15-10-2018 IPR012134 Glutamate-5-semialdehyde dehydrogenase GO:0004350|GO:0006561|GO:0050661|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922 AM378_23645 9160ea16739998f1e871f00bd6f745a3 419 TIGRFAM TIGR00407 proA: glutamate-5-semialdehyde dehydrogenase 11 408 9.2E-187 T 15-10-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 AM378_23645 9160ea16739998f1e871f00bd6f745a3 419 ProSitePatterns PS01223 Gamma-glutamyl phosphate reductase signature. 325 346 - T 15-10-2018 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 AM378_07455 d32ff2053d27922316bb12ea1ba4c646 141 PRINTS PR00502 NUDIX hydrolase family signature 47 62 1.5E-6 T 15-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 AM378_07455 d32ff2053d27922316bb12ea1ba4c646 141 PRINTS PR00502 NUDIX hydrolase family signature 33 47 1.5E-6 T 15-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 AM378_07455 d32ff2053d27922316bb12ea1ba4c646 141 Pfam PF00293 NUDIX domain 2 128 3.7E-20 T 15-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 AM378_07455 d32ff2053d27922316bb12ea1ba4c646 141 Gene3D G3DSA:3.90.79.10 1 141 1.9E-42 T 15-10-2018 AM378_07455 d32ff2053d27922316bb12ea1ba4c646 141 SUPERFAMILY SSF55811 2 134 2.98E-28 T 15-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 AM378_07455 d32ff2053d27922316bb12ea1ba4c646 141 ProSitePatterns PS00893 Nudix box signature. 38 59 - T 15-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 AM378_12820 62034b83d2c361f943d7b2f6fd440e64 229 Pfam PF02230 Phospholipase/Carboxylesterase 4 206 6.3E-38 T 15-10-2018 IPR003140 Phospholipase/carboxylesterase/thioesterase GO:0016787 AM378_12820 62034b83d2c361f943d7b2f6fd440e64 229 Gene3D G3DSA:3.40.50.1820 1 206 8.1E-34 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold AM378_12820 62034b83d2c361f943d7b2f6fd440e64 229 SUPERFAMILY SSF53474 5 205 4.79E-30 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold AM378_14900 52003c50319e0c756fb5e7b4c1d5a553 165 Pfam PF09933 Predicted small integral membrane protein (DUF2165) 4 159 7.1E-68 T 15-10-2018 IPR018681 Protein of unknown function DUF2165, transmembrane AM378_16240 db1f2607222d1c4985f564f45bf45bc6 84 Pfam PF07927 HicA toxin of bacterial toxin-antitoxin, 23 81 2.9E-10 T 15-10-2018 IPR012933 HicA mRNA interferase family GO:0003729 AM378_21235 d65956edcd0dc08fdba153f110fce17e 156 Pfam PF01316 Arginine repressor, DNA binding domain 6 74 1.0E-24 T 15-10-2018 IPR020900 Arginine repressor, DNA-binding domain GO:0003700|GO:0006355|GO:0006525 AM378_21235 d65956edcd0dc08fdba153f110fce17e 156 Hamap MF_00173 Arginine repressor [argR]. 1 155 61.063 T 15-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 AM378_21235 d65956edcd0dc08fdba153f110fce17e 156 SUPERFAMILY SSF46785 3 77 1.27E-20 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM378_21235 d65956edcd0dc08fdba153f110fce17e 156 TIGRFAM TIGR01529 argR_whole: arginine repressor 11 149 1.9E-47 T 15-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 AM378_21235 d65956edcd0dc08fdba153f110fce17e 156 Gene3D G3DSA:1.10.10.10 1 74 1.3E-34 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_21235 d65956edcd0dc08fdba153f110fce17e 156 PRINTS PR01467 Bacterial arginine repressor signature 25 38 1.0E-24 T 15-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 AM378_21235 d65956edcd0dc08fdba153f110fce17e 156 PRINTS PR01467 Bacterial arginine repressor signature 42 57 1.0E-24 T 15-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 AM378_21235 d65956edcd0dc08fdba153f110fce17e 156 PRINTS PR01467 Bacterial arginine repressor signature 90 103 1.0E-24 T 15-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 AM378_21235 d65956edcd0dc08fdba153f110fce17e 156 PRINTS PR01467 Bacterial arginine repressor signature 121 136 1.0E-24 T 15-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 AM378_21235 d65956edcd0dc08fdba153f110fce17e 156 ProDom PD007402 ARGININE REPRESSOR TRANSCRIPTION BIOSYNTHESIS DNA-BINDING REGULATION AMINO-ACID ARGR TRANSCRIPTIONAL FAMILY 89 153 3.0E-25 T 15-10-2018 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 AM378_21235 d65956edcd0dc08fdba153f110fce17e 156 Gene3D G3DSA:3.30.1360.40 75 155 2.5E-31 T 15-10-2018 AM378_21235 d65956edcd0dc08fdba153f110fce17e 156 Pfam PF02863 Arginine repressor, C-terminal domain 82 148 1.3E-23 T 15-10-2018 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 AM378_21235 d65956edcd0dc08fdba153f110fce17e 156 SUPERFAMILY SSF55252 82 150 3.14E-21 T 15-10-2018 IPR036251 Arginine repressor, C-terminal domain superfamily GO:0034618|GO:0051259 AM378_21075 144c97fd1507e02650d7a4388fe9ce09 824 SUPERFAMILY SSF50249 67 145 2.46E-17 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold AM378_21075 144c97fd1507e02650d7a4388fe9ce09 824 SUPERFAMILY SSF50249 644 739 2.6E-21 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold AM378_21075 144c97fd1507e02650d7a4388fe9ce09 824 SMART SM00955 260 588 2.2E-178 T 15-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 AM378_21075 144c97fd1507e02650d7a4388fe9ce09 824 Pfam PF00773 RNB domain 260 587 1.8E-105 T 15-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 AM378_21075 144c97fd1507e02650d7a4388fe9ce09 824 Hamap MF_01895 Ribonuclease R [rnr]. 38 726 57.236 T 15-10-2018 IPR011805 Ribonuclease R GO:0003723|GO:0004518 AM378_21075 144c97fd1507e02650d7a4388fe9ce09 824 SMART SM00316 643 726 2.2E-12 T 15-10-2018 IPR022967 RNA-binding domain, S1 AM378_21075 144c97fd1507e02650d7a4388fe9ce09 824 SMART SM00316 80 142 38.0 T 15-10-2018 IPR022967 RNA-binding domain, S1 AM378_21075 144c97fd1507e02650d7a4388fe9ce09 824 TIGRFAM TIGR02063 RNase_R: ribonuclease R 19 726 7.1E-278 T 15-10-2018 IPR011805 Ribonuclease R GO:0003723|GO:0004518 AM378_21075 144c97fd1507e02650d7a4388fe9ce09 824 Pfam PF08206 Ribonuclease B OB domain 87 144 3.3E-21 T 15-10-2018 IPR013223 Ribonuclease B, N-terminal OB domain AM378_21075 144c97fd1507e02650d7a4388fe9ce09 824 SUPERFAMILY SSF50249 222 643 2.57E-139 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold AM378_21075 144c97fd1507e02650d7a4388fe9ce09 824 SMART SM00357 86 145 6.2E-15 T 15-10-2018 IPR011129 Cold shock domain GO:0003676 AM378_21075 144c97fd1507e02650d7a4388fe9ce09 824 SUPERFAMILY SSF50249 138 236 2.86E-15 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold AM378_21075 144c97fd1507e02650d7a4388fe9ce09 824 Gene3D G3DSA:2.40.50.140 73 148 1.4E-15 T 15-10-2018 AM378_21075 144c97fd1507e02650d7a4388fe9ce09 824 Pfam PF08461 Ribonuclease R winged-helix domain 22 85 3.6E-15 T 15-10-2018 IPR013668 Ribonuclease R winged-helix domain AM378_21075 144c97fd1507e02650d7a4388fe9ce09 824 Pfam PF00575 S1 RNA binding domain 643 724 4.7E-16 T 15-10-2018 IPR003029 S1 domain GO:0003676 AM378_21075 144c97fd1507e02650d7a4388fe9ce09 824 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 67 726 7.5E-273 T 15-10-2018 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 AM378_21075 144c97fd1507e02650d7a4388fe9ce09 824 Gene3D G3DSA:2.40.50.140 646 752 4.9E-24 T 15-10-2018 AM378_19690 31f7c7c3482bc3c983ce0b2996638428 303 Gene3D G3DSA:1.10.10.10 7 97 5.8E-25 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_19690 31f7c7c3482bc3c983ce0b2996638428 303 Pfam PF03466 LysR substrate binding domain 90 290 1.6E-22 T 15-10-2018 IPR005119 LysR, substrate-binding AM378_19690 31f7c7c3482bc3c983ce0b2996638428 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 3.4E-7 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_19690 31f7c7c3482bc3c983ce0b2996638428 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 3.4E-7 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_19690 31f7c7c3482bc3c983ce0b2996638428 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 3.4E-7 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_19690 31f7c7c3482bc3c983ce0b2996638428 303 Gene3D G3DSA:3.40.190.10 101 287 5.7E-36 T 15-10-2018 AM378_19690 31f7c7c3482bc3c983ce0b2996638428 303 Gene3D G3DSA:3.40.190.10 165 260 5.7E-36 T 15-10-2018 AM378_19690 31f7c7c3482bc3c983ce0b2996638428 303 SUPERFAMILY SSF46785 4 87 1.72E-21 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM378_19690 31f7c7c3482bc3c983ce0b2996638428 303 SUPERFAMILY SSF53850 91 290 1.99E-22 T 15-10-2018 AM378_19690 31f7c7c3482bc3c983ce0b2996638428 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 67 1.3E-21 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_17585 3bf3f7db2ed5bfe0d84449d09c7a5003 129 Pfam PF02635 DsrE/DsrF-like family 4 129 9.5E-29 T 15-10-2018 IPR003787 Sulphur relay, DsrE/F-like protein AM378_17585 3bf3f7db2ed5bfe0d84449d09c7a5003 129 Gene3D G3DSA:3.40.1260.10 1 129 4.4E-58 T 15-10-2018 IPR027396 DsrEFH-like AM378_17585 3bf3f7db2ed5bfe0d84449d09c7a5003 129 Hamap MF_00390 Sulfurtransferase TusD [tusD]. 2 129 40.548 T 15-10-2018 IPR017463 Sulphur relay, TusD/DsrE GO:0005737|GO:0008033|GO:0016783 AM378_17585 3bf3f7db2ed5bfe0d84449d09c7a5003 129 SUPERFAMILY SSF75169 1 129 9.81E-38 T 15-10-2018 IPR027396 DsrEFH-like AM378_17585 3bf3f7db2ed5bfe0d84449d09c7a5003 129 TIGRFAM TIGR03012 sulf_tusD_dsrE: sulfur relay protein TusD/DsrE 4 129 2.2E-55 T 15-10-2018 IPR017463 Sulphur relay, TusD/DsrE GO:0005737|GO:0008033|GO:0016783 AM378_11180 4754d74794dd24f985245b00f8c6ef67 495 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 355 375 - T 15-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 AM378_11180 4754d74794dd24f985245b00f8c6ef67 495 SUPERFAMILY SSF53067 4 252 4.67E-55 T 15-10-2018 AM378_11180 4754d74794dd24f985245b00f8c6ef67 495 Gene3D G3DSA:3.30.420.40 242 494 2.9E-48 T 15-10-2018 AM378_11180 4754d74794dd24f985245b00f8c6ef67 495 Gene3D G3DSA:3.30.420.40 1 240 2.4E-65 T 15-10-2018 AM378_11180 4754d74794dd24f985245b00f8c6ef67 495 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 4 248 2.5E-61 T 15-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 AM378_11180 4754d74794dd24f985245b00f8c6ef67 495 SUPERFAMILY SSF53067 251 490 2.59E-43 T 15-10-2018 AM378_11180 4754d74794dd24f985245b00f8c6ef67 495 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 259 442 2.6E-21 T 15-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 AM378_11180 4754d74794dd24f985245b00f8c6ef67 495 PIRSF PIRSF000538 1 495 1.0E-79 T 15-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 AM378_20220 57dd5a674e0e24eca391eb2104c988fb 549 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 10 22 7.2E-22 T 15-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 AM378_20220 57dd5a674e0e24eca391eb2104c988fb 549 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 39 51 7.2E-22 T 15-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 AM378_20220 57dd5a674e0e24eca391eb2104c988fb 549 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 348 360 7.2E-22 T 15-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 AM378_20220 57dd5a674e0e24eca391eb2104c988fb 549 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 23 33 7.2E-22 T 15-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 AM378_20220 57dd5a674e0e24eca391eb2104c988fb 549 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 312 318 7.2E-22 T 15-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 AM378_20220 57dd5a674e0e24eca391eb2104c988fb 549 ProSitePatterns PS00977 FAD-dependent glycerol-3-phosphate dehydrogenase signature 1. 15 32 - T 15-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 AM378_20220 57dd5a674e0e24eca391eb2104c988fb 549 Gene3D G3DSA:3.50.50.60 11 367 7.8E-79 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AM378_20220 57dd5a674e0e24eca391eb2104c988fb 549 Pfam PF04324 BFD-like [2Fe-2S] binding domain 433 484 5.4E-9 T 15-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain AM378_20220 57dd5a674e0e24eca391eb2104c988fb 549 Pfam PF01266 FAD dependent oxidoreductase 11 360 6.7E-53 T 15-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 AM378_20220 57dd5a674e0e24eca391eb2104c988fb 549 SUPERFAMILY SSF51905 10 323 2.74E-45 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AM378_20220 57dd5a674e0e24eca391eb2104c988fb 549 TIGRFAM TIGR03377 glycerol3P_GlpA: glycerol-3-phosphate dehydrogenase, anaerobic, A subunit 11 539 2.0E-264 T 15-10-2018 IPR017752 Glycerol-3-phosphate dehydrogenase, GlpA subunit GO:0004368|GO:0005886|GO:0010181|GO:0046174|GO:0050660|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 AM378_20220 57dd5a674e0e24eca391eb2104c988fb 549 Gene3D G3DSA:3.30.9.10 87 319 7.8E-79 T 15-10-2018 AM378_20220 57dd5a674e0e24eca391eb2104c988fb 549 Gene3D G3DSA:1.10.10.1100 423 493 1.0E-16 T 15-10-2018 AM378_20220 57dd5a674e0e24eca391eb2104c988fb 549 ProSitePatterns PS00978 FAD-dependent glycerol-3-phosphate dehydrogenase signature 2. 353 363 - T 15-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 AM378_16345 d45a8dc5bd10912512f46dc3d65372bf 421 TIGRFAM TIGR00700 GABAtrnsam: 4-aminobutyrate transaminase 8 420 2.4E-196 T 15-10-2018 IPR004632 4-aminobutyrate aminotransferase, bacterial GO:0003867|GO:0009448 AM378_16345 d45a8dc5bd10912512f46dc3d65372bf 421 SUPERFAMILY SSF53383 24 419 2.02E-131 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM378_16345 d45a8dc5bd10912512f46dc3d65372bf 421 Pfam PF00202 Aminotransferase class-III 22 419 3.2E-128 T 15-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AM378_16345 d45a8dc5bd10912512f46dc3d65372bf 421 Gene3D G3DSA:3.40.640.10 58 317 4.1E-157 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AM378_16345 d45a8dc5bd10912512f46dc3d65372bf 421 Gene3D G3DSA:3.90.1150.10 4 416 4.1E-157 T 15-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AM378_16345 d45a8dc5bd10912512f46dc3d65372bf 421 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 235 272 - T 15-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AM378_16345 d45a8dc5bd10912512f46dc3d65372bf 421 PIRSF PIRSF000521 9 128 5.0E-4 T 15-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AM378_16345 d45a8dc5bd10912512f46dc3d65372bf 421 PIRSF PIRSF000521 124 421 1.8E-41 T 15-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AM378_18010 bbc761880654d0865139bbdab5a05630 354 Gene3D G3DSA:3.60.15.10 3 354 4.7E-113 T 15-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AM378_18010 bbc761880654d0865139bbdab5a05630 354 Pfam PF13483 Beta-lactamase superfamily domain 42 281 3.0E-13 T 15-10-2018 AM378_18010 bbc761880654d0865139bbdab5a05630 354 SUPERFAMILY SSF56281 36 301 4.48E-26 T 15-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AM378_01945 45901e4d53969bead9a3ca0c91ffe755 405 SUPERFAMILY SSF51905 13 357 2.44E-55 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AM378_01945 45901e4d53969bead9a3ca0c91ffe755 405 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 287 302 2.8E-22 T 15-10-2018 AM378_01945 45901e4d53969bead9a3ca0c91ffe755 405 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 161 176 2.8E-22 T 15-10-2018 AM378_01945 45901e4d53969bead9a3ca0c91ffe755 405 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 302 318 2.8E-22 T 15-10-2018 AM378_01945 45901e4d53969bead9a3ca0c91ffe755 405 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 12 34 2.8E-22 T 15-10-2018 AM378_01945 45901e4d53969bead9a3ca0c91ffe755 405 Gene3D G3DSA:3.50.50.60 6 192 8.7E-39 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AM378_01945 45901e4d53969bead9a3ca0c91ffe755 405 Pfam PF01494 FAD binding domain 11 352 8.7E-53 T 15-10-2018 IPR002938 FAD-binding domain GO:0071949 AM378_01945 45901e4d53969bead9a3ca0c91ffe755 405 Gene3D G3DSA:3.50.50.60 238 368 1.1E-17 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AM378_06730 5e52c87bbe1fe29e84fda4c73d94362a 97 TIGRFAM TIGR02174 CXXU_selWTH: selT/selW/selH selenoprotein domain 7 78 4.4E-19 T 15-10-2018 IPR011893 Selenoprotein, Rdx-type AM378_06730 5e52c87bbe1fe29e84fda4c73d94362a 97 Pfam PF10262 Rdx family 7 79 5.9E-30 T 15-10-2018 IPR011893 Selenoprotein, Rdx-type AM378_06730 5e52c87bbe1fe29e84fda4c73d94362a 97 SUPERFAMILY SSF52833 5 88 1.05E-26 T 15-10-2018 IPR036249 Thioredoxin-like superfamily AM378_06730 5e52c87bbe1fe29e84fda4c73d94362a 97 Gene3D G3DSA:3.40.30.10 1 97 2.1E-38 T 15-10-2018 AM378_22470 c262c1b3f9c1ed0727011710caa1819f 309 TIGRFAM TIGR00191 thrB: homoserine kinase 2 307 9.6E-113 T 15-10-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 AM378_22470 c262c1b3f9c1ed0727011710caa1819f 309 Gene3D G3DSA:3.30.70.890 168 277 4.0E-99 T 15-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily AM378_22470 c262c1b3f9c1ed0727011710caa1819f 309 PRINTS PR00958 Homoserine kinase signature 254 269 6.8E-33 T 15-10-2018 AM378_22470 c262c1b3f9c1ed0727011710caa1819f 309 PRINTS PR00958 Homoserine kinase signature 175 192 6.8E-33 T 15-10-2018 AM378_22470 c262c1b3f9c1ed0727011710caa1819f 309 PRINTS PR00958 Homoserine kinase signature 137 150 6.8E-33 T 15-10-2018 AM378_22470 c262c1b3f9c1ed0727011710caa1819f 309 PRINTS PR00958 Homoserine kinase signature 9 24 6.8E-33 T 15-10-2018 AM378_22470 c262c1b3f9c1ed0727011710caa1819f 309 PRINTS PR00958 Homoserine kinase signature 97 112 6.8E-33 T 15-10-2018 AM378_22470 c262c1b3f9c1ed0727011710caa1819f 309 ProSitePatterns PS00627 GHMP kinases putative ATP-binding domain. 90 101 - T 15-10-2018 IPR006203 GHMP kinase, ATP-binding, conserved site GO:0005524 AM378_22470 c262c1b3f9c1ed0727011710caa1819f 309 SUPERFAMILY SSF55060 173 289 1.61E-32 T 15-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily AM378_22470 c262c1b3f9c1ed0727011710caa1819f 309 Hamap MF_00384 Homoserine kinase [thrB]. 4 308 28.732 T 15-10-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 AM378_22470 c262c1b3f9c1ed0727011710caa1819f 309 SUPERFAMILY SSF54211 1 178 3.11E-31 T 15-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AM378_22470 c262c1b3f9c1ed0727011710caa1819f 309 Pfam PF08544 GHMP kinases C terminal 212 279 1.3E-9 T 15-10-2018 IPR013750 GHMP kinase, C-terminal domain AM378_22470 c262c1b3f9c1ed0727011710caa1819f 309 Pfam PF00288 GHMP kinases N terminal domain 85 150 5.1E-14 T 15-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 AM378_22470 c262c1b3f9c1ed0727011710caa1819f 309 PIRSF PIRSF000676 1 308 1.4E-83 T 15-10-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 AM378_22470 c262c1b3f9c1ed0727011710caa1819f 309 Gene3D G3DSA:3.30.230.10 4 167 4.0E-99 T 15-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AM378_24065 05a4c7852b56ab38a8c64bfdb75e56bb 189 Pfam PF06438 Heme-binding protein A (HasA) 1 180 3.4E-53 T 15-10-2018 IPR010495 Haem-binding HasA AM378_24065 05a4c7852b56ab38a8c64bfdb75e56bb 189 Gene3D G3DSA:3.30.1500.10 1 189 5.8E-78 T 15-10-2018 IPR036912 Haem-binding HasA superfamily AM378_24065 05a4c7852b56ab38a8c64bfdb75e56bb 189 PIRSF PIRSF019876 1 189 1.5E-82 T 15-10-2018 IPR010495 Haem-binding HasA AM378_24065 05a4c7852b56ab38a8c64bfdb75e56bb 189 SUPERFAMILY SSF54621 3 175 1.83E-72 T 15-10-2018 IPR036912 Haem-binding HasA superfamily AM378_03050 33ed2e51b745612925eba5a8fa2b1e55 462 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 355 436 2.0E-6 T 15-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain AM378_03050 33ed2e51b745612925eba5a8fa2b1e55 462 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 233 345 5.7E-14 T 15-10-2018 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 AM378_03050 33ed2e51b745612925eba5a8fa2b1e55 462 SUPERFAMILY SSF54534 243 437 2.36E-17 T 15-10-2018 AM378_03050 33ed2e51b745612925eba5a8fa2b1e55 462 Gene3D G3DSA:3.10.50.40 334 445 2.8E-14 T 15-10-2018 AM378_03050 33ed2e51b745612925eba5a8fa2b1e55 462 Gene3D G3DSA:1.10.287.460 227 333 7.5E-18 T 15-10-2018 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily GO:0006457 AM378_14575 01aeba4eaa917b1b4528bb83aa48342b 420 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 376 389 1.1E-19 T 15-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 AM378_14575 01aeba4eaa917b1b4528bb83aa48342b 420 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 51 69 1.1E-19 T 15-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 AM378_14575 01aeba4eaa917b1b4528bb83aa48342b 420 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 265 284 1.1E-19 T 15-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 AM378_14575 01aeba4eaa917b1b4528bb83aa48342b 420 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 71 83 1.1E-19 T 15-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 AM378_14575 01aeba4eaa917b1b4528bb83aa48342b 420 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 182 195 1.1E-19 T 15-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 AM378_14575 01aeba4eaa917b1b4528bb83aa48342b 420 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 42 275 2.9E-59 T 15-10-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 AM378_14575 01aeba4eaa917b1b4528bb83aa48342b 420 Gene3D G3DSA:2.40.37.10 22 416 7.6E-147 T 15-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 AM378_14575 01aeba4eaa917b1b4528bb83aa48342b 420 Gene3D G3DSA:3.20.20.10 33 279 7.6E-147 T 15-10-2018 IPR029066 PLP-binding barrel AM378_14575 01aeba4eaa917b1b4528bb83aa48342b 420 SUPERFAMILY SSF50621 250 419 1.3E-58 T 15-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 AM378_14575 01aeba4eaa917b1b4528bb83aa48342b 420 PRINTS PR01181 Diaminopimelate decarboxylase signature 69 86 1.3E-26 T 15-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AM378_14575 01aeba4eaa917b1b4528bb83aa48342b 420 PRINTS PR01181 Diaminopimelate decarboxylase signature 157 166 1.3E-26 T 15-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AM378_14575 01aeba4eaa917b1b4528bb83aa48342b 420 PRINTS PR01181 Diaminopimelate decarboxylase signature 386 408 1.3E-26 T 15-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AM378_14575 01aeba4eaa917b1b4528bb83aa48342b 420 PRINTS PR01181 Diaminopimelate decarboxylase signature 293 311 1.3E-26 T 15-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AM378_14575 01aeba4eaa917b1b4528bb83aa48342b 420 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 216 229 - T 15-10-2018 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site AM378_14575 01aeba4eaa917b1b4528bb83aa48342b 420 Hamap MF_02120 Diaminopimelate decarboxylase [lysA]. 14 419 38.674 T 15-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AM378_14575 01aeba4eaa917b1b4528bb83aa48342b 420 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 51 69 - T 15-10-2018 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site AM378_14575 01aeba4eaa917b1b4528bb83aa48342b 420 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 276 376 3.4E-26 T 15-10-2018 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 AM378_14575 01aeba4eaa917b1b4528bb83aa48342b 420 TIGRFAM TIGR01048 lysA: diaminopimelate decarboxylase 6 418 2.2E-131 T 15-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AM378_14575 01aeba4eaa917b1b4528bb83aa48342b 420 SUPERFAMILY SSF51419 25 277 3.27E-57 T 15-10-2018 IPR029066 PLP-binding barrel AM378_00490 518f2e8d9bcab562c50a8858f9ad9467 258 SUPERFAMILY SSF51735 3 255 2.17E-56 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily AM378_00490 518f2e8d9bcab562c50a8858f9ad9467 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 2.8E-19 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_00490 518f2e8d9bcab562c50a8858f9ad9467 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 167 184 2.8E-19 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_00490 518f2e8d9bcab562c50a8858f9ad9467 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 146 165 2.8E-19 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_00490 518f2e8d9bcab562c50a8858f9ad9467 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 73 84 2.8E-19 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_00490 518f2e8d9bcab562c50a8858f9ad9467 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 120 136 2.8E-19 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_00490 518f2e8d9bcab562c50a8858f9ad9467 258 Gene3D G3DSA:3.40.50.720 2 244 9.8E-60 T 15-10-2018 AM378_00490 518f2e8d9bcab562c50a8858f9ad9467 258 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 133 161 - T 15-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AM378_00490 518f2e8d9bcab562c50a8858f9ad9467 258 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 3 182 0.0018 T 15-10-2018 AM378_00490 518f2e8d9bcab562c50a8858f9ad9467 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 146 165 4.4E-5 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_00490 518f2e8d9bcab562c50a8858f9ad9467 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 126 134 4.4E-5 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_00490 518f2e8d9bcab562c50a8858f9ad9467 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 73 84 4.4E-5 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_00490 518f2e8d9bcab562c50a8858f9ad9467 258 Pfam PF00106 short chain dehydrogenase 3 191 3.3E-43 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_20700 4cbded4de7553ed4ffeaab5fd19580f8 255 Gene3D G3DSA:3.90.79.10 126 255 1.0E-39 T 15-10-2018 AM378_20700 4cbded4de7553ed4ffeaab5fd19580f8 255 Pfam PF00293 NUDIX domain 130 234 2.2E-17 T 15-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 AM378_20700 4cbded4de7553ed4ffeaab5fd19580f8 255 Pfam PF09297 NADH pyrophosphatase zinc ribbon domain 93 124 1.4E-7 T 15-10-2018 IPR015376 Zinc ribbon, NADH pyrophosphatase GO:0016787|GO:0046872 KEGG: 00760+3.6.1.22|MetaCyc: PWY-5381|MetaCyc: PWY-7761 AM378_20700 4cbded4de7553ed4ffeaab5fd19580f8 255 Hamap MF_00297 NADH pyrophosphatase [nudC]. 1 255 42.95 T 15-10-2018 IPR022925 NADH pyrophosphatase NudC GO:0000210 KEGG: 00760+3.6.1.22|MetaCyc: PWY-5381|MetaCyc: PWY-7761 AM378_20700 4cbded4de7553ed4ffeaab5fd19580f8 255 ProSitePatterns PS00893 Nudix box signature. 159 180 - T 15-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 AM378_20700 4cbded4de7553ed4ffeaab5fd19580f8 255 SUPERFAMILY SSF55811 3 96 1.11E-31 T 15-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 AM378_20700 4cbded4de7553ed4ffeaab5fd19580f8 255 Gene3D G3DSA:3.90.79.20 1 125 2.1E-45 T 15-10-2018 AM378_20700 4cbded4de7553ed4ffeaab5fd19580f8 255 SUPERFAMILY SSF55811 79 241 1.02E-38 T 15-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 AM378_14805 018d18c5607a2bafe60f665eacd3a822 419 Pfam PF07335 Fungal chitosanase of glycosyl hydrolase group 75 41 168 1.9E-11 T 15-10-2018 IPR009939 Fungal chitosanase GO:0016977 KEGG: 00520+3.2.1.132 AM378_04800 e127c11adb3d148904771b74ac3f6ba0 196 ProSitePatterns PS01195 Peptidyl-tRNA hydrolase signature 1. 17 30 - T 15-10-2018 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 AM378_04800 e127c11adb3d148904771b74ac3f6ba0 196 Gene3D G3DSA:3.40.50.1470 1 195 3.3E-73 T 15-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 AM378_04800 e127c11adb3d148904771b74ac3f6ba0 196 TIGRFAM TIGR00447 pth: aminoacyl-tRNA hydrolase 4 191 1.4E-69 T 15-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 AM378_04800 e127c11adb3d148904771b74ac3f6ba0 196 SUPERFAMILY SSF53178 4 193 7.85E-70 T 15-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 AM378_04800 e127c11adb3d148904771b74ac3f6ba0 196 Pfam PF01195 Peptidyl-tRNA hydrolase 6 189 2.6E-53 T 15-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 AM378_04800 e127c11adb3d148904771b74ac3f6ba0 196 Hamap MF_00083 Peptidyl-tRNA hydrolase [pth]. 4 183 35.748 T 15-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 AM378_04800 e127c11adb3d148904771b74ac3f6ba0 196 ProSitePatterns PS01196 Peptidyl-tRNA hydrolase signature 2. 111 121 - T 15-10-2018 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 AM378_05400 4d985ce0b26d427423260a2fd8aa26c3 269 Hamap MF_01375 Phosphonoacetaldehyde hydrolase [phnX]. 1 269 133.603 T 15-10-2018 IPR006323 Phosphonoacetaldehyde hydrolase GO:0019700|GO:0050194 KEGG: 00440+3.11.1.1 AM378_05400 4d985ce0b26d427423260a2fd8aa26c3 269 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 35 203 4.9E-15 T 15-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AM378_05400 4d985ce0b26d427423260a2fd8aa26c3 269 Gene3D G3DSA:1.10.150.240 22 100 2.5E-102 T 15-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 AM378_05400 4d985ce0b26d427423260a2fd8aa26c3 269 SUPERFAMILY SSF56784 4 259 8.45E-54 T 15-10-2018 IPR036412 HAD-like superfamily AM378_05400 4d985ce0b26d427423260a2fd8aa26c3 269 TIGRFAM TIGR01422 phosphonatase: phosphonoacetaldehyde hydrolase 3 257 6.9E-112 T 15-10-2018 IPR006323 Phosphonoacetaldehyde hydrolase GO:0019700|GO:0050194 KEGG: 00440+3.11.1.1 AM378_05400 4d985ce0b26d427423260a2fd8aa26c3 269 Gene3D G3DSA:3.40.50.1000 6 269 2.5E-102 T 15-10-2018 IPR023214 HAD superfamily AM378_14230 e929bed60aa1aab7897641a6e4de6d35 148 Pfam PF08332 Calcium/calmodulin dependent protein kinase II association domain 32 146 4.3E-13 T 15-10-2018 IPR013543 Calcium/calmodulin-dependent protein kinase II, association-domain GO:0004683|GO:0005516|GO:0006468 Reactome: R-HSA-3371571|Reactome: R-HSA-399719|Reactome: R-HSA-438066|Reactome: R-HSA-442729|Reactome: R-HSA-442742|Reactome: R-HSA-442982|Reactome: R-HSA-5576892|Reactome: R-HSA-5578775|Reactome: R-HSA-5673001|Reactome: R-HSA-877300|Reactome: R-HSA-936837 AM378_14230 e929bed60aa1aab7897641a6e4de6d35 148 TIGRFAM TIGR02246 TIGR02246: conserved hypothetical protein 29 146 6.8E-12 T 15-10-2018 IPR011944 Steroid delta5-4-isomerase KEGG: 00140+5.3.3.1|KEGG: 00984+5.3.3.1|MetaCyc: PWY-2582|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-699|MetaCyc: PWY-7299 AM378_14230 e929bed60aa1aab7897641a6e4de6d35 148 PIRSF PIRSF028470 6 148 8.9E-52 T 15-10-2018 IPR016887 Uncharacterised conserved protein UCP028470, steroid isomerase-related AM378_14230 e929bed60aa1aab7897641a6e4de6d35 148 SUPERFAMILY SSF54427 20 147 1.11E-21 T 15-10-2018 IPR032710 NTF2-like domain superfamily AM378_14230 e929bed60aa1aab7897641a6e4de6d35 148 Gene3D G3DSA:3.10.450.50 16 148 1.8E-35 T 15-10-2018 AM378_03855 eb7e80921ca51d759e1f8cf5877d14bc 361 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 45 345 3.4E-73 T 15-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AM378_03855 eb7e80921ca51d759e1f8cf5877d14bc 361 Gene3D G3DSA:2.40.30.170 57 274 3.2E-67 T 15-10-2018 AM378_03855 eb7e80921ca51d759e1f8cf5877d14bc 361 Gene3D G3DSA:2.40.50.100 64 192 3.2E-67 T 15-10-2018 AM378_03855 eb7e80921ca51d759e1f8cf5877d14bc 361 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 61 264 1.1E-28 T 15-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AM378_03855 eb7e80921ca51d759e1f8cf5877d14bc 361 Gene3D G3DSA:1.10.287.470 99 158 3.2E-67 T 15-10-2018 AM378_03855 eb7e80921ca51d759e1f8cf5877d14bc 361 SUPERFAMILY SSF111369 57 269 8.5E-38 T 15-10-2018 AM378_03855 eb7e80921ca51d759e1f8cf5877d14bc 361 Gene3D G3DSA:2.40.420.20 275 344 3.2E-67 T 15-10-2018 AM378_08680 28bd1027c3c5b8f75059314badb199d0 204 TIGRFAM TIGR00084 ruvA: Holliday junction DNA helicase RuvA 1 204 7.4E-70 T 15-10-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 AM378_08680 28bd1027c3c5b8f75059314badb199d0 204 Gene3D G3DSA:2.40.50.140 1 66 3.3E-28 T 15-10-2018 AM378_08680 28bd1027c3c5b8f75059314badb199d0 204 Hamap MF_00031 Holliday junction ATP-dependent DNA helicase RuvA [ruvA]. 1 204 33.223 T 15-10-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 AM378_08680 28bd1027c3c5b8f75059314badb199d0 204 SUPERFAMILY SSF50249 1 63 6.85E-19 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold AM378_08680 28bd1027c3c5b8f75059314badb199d0 204 SUPERFAMILY SSF46929 159 202 2.09E-10 T 15-10-2018 IPR036267 RuvA, C-terminal domain superfamily AM378_08680 28bd1027c3c5b8f75059314badb199d0 204 Pfam PF07499 RuvA, C-terminal domain 160 202 8.7E-16 T 15-10-2018 IPR011114 Holliday junction DNA helicase RuvA, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 AM378_08680 28bd1027c3c5b8f75059314badb199d0 204 SMART SM00278 108 127 0.15 T 15-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 AM378_08680 28bd1027c3c5b8f75059314badb199d0 204 SMART SM00278 73 92 0.054 T 15-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 AM378_08680 28bd1027c3c5b8f75059314badb199d0 204 SUPERFAMILY SSF47781 66 136 1.0E-22 T 15-10-2018 IPR010994 RuvA domain 2-like AM378_08680 28bd1027c3c5b8f75059314badb199d0 204 Gene3D G3DSA:1.10.150.20 67 142 5.9E-30 T 15-10-2018 AM378_08680 28bd1027c3c5b8f75059314badb199d0 204 Pfam PF01330 RuvA N terminal domain 1 62 1.1E-20 T 15-10-2018 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial GO:0005524|GO:0006281|GO:0006310|GO:0009378 AM378_08680 28bd1027c3c5b8f75059314badb199d0 204 Gene3D G3DSA:1.10.8.10 157 204 5.2E-25 T 15-10-2018 AM378_08680 28bd1027c3c5b8f75059314badb199d0 204 Pfam PF14520 Helix-hairpin-helix domain 72 130 4.1E-17 T 15-10-2018 AM378_11440 ff36cf82b0005d0bf2dce3b4b69adab7 363 SUPERFAMILY SSF161098 127 344 6.93E-15 T 15-10-2018 IPR035906 MetI-like superfamily AM378_11440 ff36cf82b0005d0bf2dce3b4b69adab7 363 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 150 357 7.2E-39 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AM378_11440 ff36cf82b0005d0bf2dce3b4b69adab7 363 Gene3D G3DSA:1.10.3720.10 120 352 3.5E-18 T 15-10-2018 IPR035906 MetI-like superfamily AM378_13535 bd99cf231018a47ce5f2d9d8e13c25bf 168 Hamap MF_00972 tRNA-specific adenosine deaminase [tadA]. 10 151 48.448 T 15-10-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 AM378_13535 bd99cf231018a47ce5f2d9d8e13c25bf 168 Pfam PF14437 MafB19-like deaminase 5 149 1.8E-31 T 15-10-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 AM378_13535 bd99cf231018a47ce5f2d9d8e13c25bf 168 SUPERFAMILY SSF53927 4 155 2.54E-58 T 15-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 AM378_13535 bd99cf231018a47ce5f2d9d8e13c25bf 168 Gene3D G3DSA:3.40.140.10 1 167 1.8E-67 T 15-10-2018 AM378_13535 bd99cf231018a47ce5f2d9d8e13c25bf 168 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 55 92 - T 15-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 AM378_11690 3c060fbd071451d6089570a899288101 285 Gene3D G3DSA:1.10.12.10 223 273 2.4E-31 T 15-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal AM378_11690 3c060fbd071451d6089570a899288101 285 Pfam PF00378 Enoyl-CoA hydratase/isomerase 32 279 6.6E-80 T 15-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 AM378_11690 3c060fbd071451d6089570a899288101 285 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 123 143 - T 15-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 AM378_11690 3c060fbd071451d6089570a899288101 285 Gene3D G3DSA:3.90.226.10 1 222 5.9E-86 T 15-10-2018 AM378_11690 3c060fbd071451d6089570a899288101 285 SUPERFAMILY SSF52096 16 280 1.99E-79 T 15-10-2018 IPR029045 ClpP/crotonase-like domain superfamily AM378_11690 3c060fbd071451d6089570a899288101 285 Hamap MF_01934 1,4-dihydroxy-2-naphthoyl-CoA synthase [menB]. 15 284 55.908 T 15-10-2018 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB GO:0008935|GO:0009234 KEGG: 00130+4.1.3.36|MetaCyc: PWY-5837 AM378_11690 3c060fbd071451d6089570a899288101 285 TIGRFAM TIGR01929 menB: naphthoate synthase 22 281 5.3E-150 T 15-10-2018 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB GO:0008935|GO:0009234 KEGG: 00130+4.1.3.36|MetaCyc: PWY-5837 AM378_11540 3e5d146ca9e8b9c58b560160123e865f 245 Gene3D G3DSA:3.30.70.20 88 230 2.4E-57 T 15-10-2018 AM378_11540 3e5d146ca9e8b9c58b560160123e865f 245 SUPERFAMILY SSF54862 42 222 4.71E-64 T 15-10-2018 AM378_11540 3e5d146ca9e8b9c58b560160123e865f 245 Pfam PF13247 4Fe-4S dicluster domain 94 187 4.3E-29 T 15-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AM378_11540 3e5d146ca9e8b9c58b560160123e865f 245 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 132 143 - T 15-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AM378_11540 3e5d146ca9e8b9c58b560160123e865f 245 Gene3D G3DSA:3.30.70.20 32 87 2.8E-8 T 15-10-2018 AM378_19090 f0d676db11555247c41349b9dd6d32bc 607 Pfam PF00009 Elongation factor Tu GTP binding domain 4 194 3.1E-57 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM378_19090 f0d676db11555247c41349b9dd6d32bc 607 SUPERFAMILY SSF54980 302 387 5.76E-15 T 15-10-2018 IPR035647 EF-G domain III/V-like AM378_19090 f0d676db11555247c41349b9dd6d32bc 607 SUPERFAMILY SSF50447 151 299 7.95E-31 T 15-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily AM378_19090 f0d676db11555247c41349b9dd6d32bc 607 SUPERFAMILY SSF52540 3 219 5.27E-58 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_19090 f0d676db11555247c41349b9dd6d32bc 607 PRINTS PR00315 GTP-binding elongation factor signature 87 98 9.6E-15 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM378_19090 f0d676db11555247c41349b9dd6d32bc 607 PRINTS PR00315 GTP-binding elongation factor signature 123 132 9.6E-15 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM378_19090 f0d676db11555247c41349b9dd6d32bc 607 PRINTS PR00315 GTP-binding elongation factor signature 71 81 9.6E-15 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM378_19090 f0d676db11555247c41349b9dd6d32bc 607 PRINTS PR00315 GTP-binding elongation factor signature 51 59 9.6E-15 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM378_19090 f0d676db11555247c41349b9dd6d32bc 607 PRINTS PR00315 GTP-binding elongation factor signature 7 20 9.6E-15 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM378_19090 f0d676db11555247c41349b9dd6d32bc 607 Gene3D G3DSA:2.40.50.250 483 599 4.3E-129 T 15-10-2018 AM378_19090 f0d676db11555247c41349b9dd6d32bc 607 Gene3D G3DSA:3.30.70.240 389 482 4.3E-129 T 15-10-2018 AM378_19090 f0d676db11555247c41349b9dd6d32bc 607 Pfam PF00679 Elongation factor G C-terminus 397 477 1.1E-20 T 15-10-2018 IPR000640 Elongation factor EFG, domain V-like AM378_19090 f0d676db11555247c41349b9dd6d32bc 607 Pfam PF03144 Elongation factor Tu domain 2 219 289 2.0E-9 T 15-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 AM378_19090 f0d676db11555247c41349b9dd6d32bc 607 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 44 59 - T 15-10-2018 IPR031157 Tr-type G domain, conserved site AM378_19090 f0d676db11555247c41349b9dd6d32bc 607 Gene3D G3DSA:3.40.50.300 1 198 1.1E-68 T 15-10-2018 AM378_19090 f0d676db11555247c41349b9dd6d32bc 607 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 5 134 1.1E-25 T 15-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 AM378_19090 f0d676db11555247c41349b9dd6d32bc 607 Gene3D G3DSA:3.30.70.870 306 590 4.3E-129 T 15-10-2018 AM378_19090 f0d676db11555247c41349b9dd6d32bc 607 Gene3D G3DSA:2.40.30.10 199 299 9.6E-34 T 15-10-2018 AM378_19090 f0d676db11555247c41349b9dd6d32bc 607 TIGRFAM TIGR01394 TypA_BipA: GTP-binding protein TypA/BipA 5 599 3.5E-289 T 15-10-2018 IPR006298 GTP-binding protein TypA GO:0005525 AM378_19090 f0d676db11555247c41349b9dd6d32bc 607 SUPERFAMILY SSF54980 398 512 4.65E-25 T 15-10-2018 IPR035647 EF-G domain III/V-like AM378_21295 83fe610d3898a74cfe241ef2ad90e7c7 158 SUPERFAMILY SSF46557 3 78 3.79E-29 T 15-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 AM378_21295 83fe610d3898a74cfe241ef2ad90e7c7 158 SUPERFAMILY SSF54534 82 157 1.05E-24 T 15-10-2018 AM378_21295 83fe610d3898a74cfe241ef2ad90e7c7 158 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 83 157 4.4E-29 T 15-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 AM378_21295 83fe610d3898a74cfe241ef2ad90e7c7 158 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 121 137 - T 15-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 AM378_21295 83fe610d3898a74cfe241ef2ad90e7c7 158 TIGRFAM TIGR01462 greA: transcription elongation factor GreA 5 156 1.4E-60 T 15-10-2018 IPR006359 Transcription elongation factor GreA GO:0003677|GO:0032784 AM378_21295 83fe610d3898a74cfe241ef2ad90e7c7 158 Gene3D G3DSA:3.10.50.30 76 158 7.4E-33 T 15-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 AM378_21295 83fe610d3898a74cfe241ef2ad90e7c7 158 PIRSF PIRSF006092 1 158 1.9E-55 T 15-10-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 AM378_21295 83fe610d3898a74cfe241ef2ad90e7c7 158 Gene3D G3DSA:1.10.287.180 1 75 2.5E-33 T 15-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 AM378_21295 83fe610d3898a74cfe241ef2ad90e7c7 158 Hamap MF_00105 Transcription elongation factor GreA [greA]. 2 156 33.841 T 15-10-2018 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 AM378_21295 83fe610d3898a74cfe241ef2ad90e7c7 158 Pfam PF03449 Transcription elongation factor, N-terminal 4 74 3.4E-32 T 15-10-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 AM378_21295 83fe610d3898a74cfe241ef2ad90e7c7 158 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 17 48 - T 15-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 AM378_22400 e2d709fb0ea1ef070afde8fb7afc6739 555 SMART SM00382 348 522 1.3E-12 T 15-10-2018 IPR003593 AAA+ ATPase domain AM378_22400 e2d709fb0ea1ef070afde8fb7afc6739 555 SMART SM00382 31 236 5.3E-8 T 15-10-2018 IPR003593 AAA+ ATPase domain AM378_22400 e2d709fb0ea1ef070afde8fb7afc6739 555 SUPERFAMILY SSF52540 301 526 2.58E-47 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_22400 e2d709fb0ea1ef070afde8fb7afc6739 555 Gene3D G3DSA:3.40.50.300 1 285 7.0E-89 T 15-10-2018 AM378_22400 e2d709fb0ea1ef070afde8fb7afc6739 555 Gene3D G3DSA:3.40.50.300 286 555 3.5E-78 T 15-10-2018 AM378_22400 e2d709fb0ea1ef070afde8fb7afc6739 555 ProSitePatterns PS00211 ABC transporters family signature. 163 177 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM378_22400 e2d709fb0ea1ef070afde8fb7afc6739 555 TIGRFAM TIGR03719 ABC_ABC_ChvD: ATP-binding cassette protein, ChvD family 2 553 1.7E-293 T 15-10-2018 IPR022374 Energy-dependent translational throttle protein EttA GO:0045900 AM378_22400 e2d709fb0ea1ef070afde8fb7afc6739 555 SUPERFAMILY SSF52540 11 243 1.1E-48 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_22400 e2d709fb0ea1ef070afde8fb7afc6739 555 Pfam PF00005 ABC transporter 22 191 4.8E-31 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM378_22400 e2d709fb0ea1ef070afde8fb7afc6739 555 Pfam PF00005 ABC transporter 340 473 9.7E-24 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM378_22400 e2d709fb0ea1ef070afde8fb7afc6739 555 Pfam PF12848 ABC transporter 230 306 1.4E-11 T 15-10-2018 IPR032781 ABC-transporter extension domain AM378_15555 07f07290b277cd6b2f81b0a6878e9fdf 231 Pfam PF04231 Endonuclease I 42 226 1.2E-43 T 15-10-2018 IPR007346 Endonuclease I GO:0004518 AM378_15555 07f07290b277cd6b2f81b0a6878e9fdf 231 SUPERFAMILY SSF54060 21 226 2.71E-87 T 15-10-2018 AM378_12795 7bb61d59600ec15c1f91f4ae515ba30a 183 SMART SM00421 110 167 1.7E-4 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM378_12795 7bb61d59600ec15c1f91f4ae515ba30a 183 Pfam PF00196 Bacterial regulatory proteins, luxR family 112 158 2.9E-11 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM378_12795 7bb61d59600ec15c1f91f4ae515ba30a 183 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 127 143 6.3E-5 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM378_12795 7bb61d59600ec15c1f91f4ae515ba30a 183 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 113 127 6.3E-5 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM378_12795 7bb61d59600ec15c1f91f4ae515ba30a 183 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 143 155 6.3E-5 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM378_12795 7bb61d59600ec15c1f91f4ae515ba30a 183 Gene3D G3DSA:1.10.10.10 102 169 9.5E-9 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_12795 7bb61d59600ec15c1f91f4ae515ba30a 183 SUPERFAMILY SSF46894 99 166 7.82E-10 T 15-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AM378_09750 fc68b71f509edeff9533bf4beb72faeb 123 PIRSF PIRSF018634 2 122 1.0E-32 T 15-10-2018 IPR009387 Toxin HigB-2 AM378_09750 fc68b71f509edeff9533bf4beb72faeb 123 Pfam PF06296 RelE toxin of RelE / RelB toxin-antitoxin system 4 119 6.4E-36 T 15-10-2018 IPR009387 Toxin HigB-2 AM378_07970 c622f0723f3e502bd89a94ce8f3143e1 265 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 8 187 4.4E-4 T 15-10-2018 AM378_07970 c622f0723f3e502bd89a94ce8f3143e1 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 2.3E-43 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_07970 c622f0723f3e502bd89a94ce8f3143e1 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 2.3E-43 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_07970 c622f0723f3e502bd89a94ce8f3143e1 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 2.3E-43 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_07970 c622f0723f3e502bd89a94ce8f3143e1 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 226 246 2.3E-43 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_07970 c622f0723f3e502bd89a94ce8f3143e1 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 2.3E-43 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_07970 c622f0723f3e502bd89a94ce8f3143e1 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 194 2.3E-43 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_07970 c622f0723f3e502bd89a94ce8f3143e1 265 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 136 144 5.8E-11 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_07970 c622f0723f3e502bd89a94ce8f3143e1 265 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 5.8E-11 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_07970 c622f0723f3e502bd89a94ce8f3143e1 265 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 156 175 5.8E-11 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_07970 c622f0723f3e502bd89a94ce8f3143e1 265 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 262 3.0E-61 T 15-10-2018 AM378_07970 c622f0723f3e502bd89a94ce8f3143e1 265 SUPERFAMILY SSF51735 7 264 5.48E-80 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily AM378_07970 c622f0723f3e502bd89a94ce8f3143e1 265 Gene3D G3DSA:3.40.50.720 1 264 8.6E-86 T 15-10-2018 AM378_07970 c622f0723f3e502bd89a94ce8f3143e1 265 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 143 171 - T 15-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AM378_04665 c83e3b60d051f39845a3c5f9ed001b16 344 Pfam PF16868 NMT1-like family 37 325 7.4E-107 T 15-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family AM378_04665 c83e3b60d051f39845a3c5f9ed001b16 344 SUPERFAMILY SSF53850 33 326 5.16E-58 T 15-10-2018 AM378_04665 c83e3b60d051f39845a3c5f9ed001b16 344 TIGRFAM TIGR02122 TRAP_TAXI: TRAP transporter solute receptor, TAXI family 4 325 5.5E-85 T 15-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family AM378_04665 c83e3b60d051f39845a3c5f9ed001b16 344 Gene3D G3DSA:3.40.190.10 123 262 4.3E-84 T 15-10-2018 AM378_04665 c83e3b60d051f39845a3c5f9ed001b16 344 Gene3D G3DSA:3.40.190.10 37 325 4.3E-84 T 15-10-2018 AM378_03195 b307315530c47b490ed0e38954d70813 87 TIGRFAM TIGR02183 GRXA: glutaredoxin, GrxA family 2 86 5.1E-51 T 15-10-2018 IPR011902 Glutaredoxin, GrxA GO:0009055|GO:0015035|GO:0045454 AM378_03195 b307315530c47b490ed0e38954d70813 87 Gene3D G3DSA:3.40.30.10 3 85 1.3E-24 T 15-10-2018 AM378_03195 b307315530c47b490ed0e38954d70813 87 Pfam PF00462 Glutaredoxin 4 69 6.9E-16 T 15-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 AM378_03195 b307315530c47b490ed0e38954d70813 87 SUPERFAMILY SSF52833 4 81 3.71E-20 T 15-10-2018 IPR036249 Thioredoxin-like superfamily AM378_03195 b307315530c47b490ed0e38954d70813 87 ProSitePatterns PS00195 Glutaredoxin active site. 5 20 - T 15-10-2018 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 Reactome: R-HSA-499943 AM378_03195 b307315530c47b490ed0e38954d70813 87 PRINTS PR00160 Glutaredoxin signature 52 65 8.1E-12 T 15-10-2018 IPR014025 Glutaredoxin subgroup AM378_03195 b307315530c47b490ed0e38954d70813 87 PRINTS PR00160 Glutaredoxin signature 66 79 8.1E-12 T 15-10-2018 IPR014025 Glutaredoxin subgroup AM378_03195 b307315530c47b490ed0e38954d70813 87 PRINTS PR00160 Glutaredoxin signature 3 21 8.1E-12 T 15-10-2018 IPR014025 Glutaredoxin subgroup AM378_10635 9533f353050dc1501470a5f3d4d79e89 336 SMART SM00846 2 152 5.8E-90 T 15-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM378_10635 9533f353050dc1501470a5f3d4d79e89 336 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 109 122 7.8E-34 T 15-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM378_10635 9533f353050dc1501470a5f3d4d79e89 336 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 173 189 7.8E-34 T 15-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM378_10635 9533f353050dc1501470a5f3d4d79e89 336 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 229 246 7.8E-34 T 15-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM378_10635 9533f353050dc1501470a5f3d4d79e89 336 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 270 285 7.8E-34 T 15-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM378_10635 9533f353050dc1501470a5f3d4d79e89 336 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 146 164 7.8E-34 T 15-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM378_10635 9533f353050dc1501470a5f3d4d79e89 336 SUPERFAMILY SSF51735 2 151 4.32E-61 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily AM378_10635 9533f353050dc1501470a5f3d4d79e89 336 Gene3D G3DSA:3.40.50.720 3 328 4.6E-145 T 15-10-2018 AM378_10635 9533f353050dc1501470a5f3d4d79e89 336 SUPERFAMILY SSF55347 152 315 8.04E-66 T 15-10-2018 AM378_10635 9533f353050dc1501470a5f3d4d79e89 336 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 3 326 4.1E-125 T 15-10-2018 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM378_10635 9533f353050dc1501470a5f3d4d79e89 336 Gene3D G3DSA:3.30.360.10 151 316 4.6E-145 T 15-10-2018 AM378_10635 9533f353050dc1501470a5f3d4d79e89 336 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 157 314 4.1E-60 T 15-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM378_10635 9533f353050dc1501470a5f3d4d79e89 336 PIRSF PIRSF000149 1 335 4.9E-128 T 15-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM378_10635 9533f353050dc1501470a5f3d4d79e89 336 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 2 102 5.2E-38 T 15-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM378_09035 af5eee0a289e09e8b4ffdfef62e83f4c 404 PIRSF PIRSF000521 20 159 4.2E-6 T 15-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AM378_09035 af5eee0a289e09e8b4ffdfef62e83f4c 404 PIRSF PIRSF000521 170 402 2.2E-38 T 15-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AM378_09035 af5eee0a289e09e8b4ffdfef62e83f4c 404 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 222 259 - T 15-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AM378_09035 af5eee0a289e09e8b4ffdfef62e83f4c 404 TIGRFAM TIGR00707 argD: transaminase, acetylornithine/succinylornithine family 15 399 1.8E-156 T 15-10-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 AM378_09035 af5eee0a289e09e8b4ffdfef62e83f4c 404 Hamap MF_01107 Acetylornithine/succinyldiaminopimelate aminotransferase [argD]. 15 402 70.729 T 15-10-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 AM378_09035 af5eee0a289e09e8b4ffdfef62e83f4c 404 Gene3D G3DSA:3.40.640.10 59 304 6.5E-155 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AM378_09035 af5eee0a289e09e8b4ffdfef62e83f4c 404 Pfam PF00202 Aminotransferase class-III 25 399 8.0E-126 T 15-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AM378_09035 af5eee0a289e09e8b4ffdfef62e83f4c 404 SUPERFAMILY SSF53383 15 399 2.18E-128 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM378_09035 af5eee0a289e09e8b4ffdfef62e83f4c 404 TIGRFAM TIGR03246 arg_catab_astC: succinylornithine transaminase family 7 403 2.8E-225 T 15-10-2018 IPR017652 Acetyl/Succinylornithine transaminase family, bacteria GO:0006520|GO:0008483|GO:0030170 AM378_09035 af5eee0a289e09e8b4ffdfef62e83f4c 404 Gene3D G3DSA:3.90.1150.10 24 392 6.5E-155 T 15-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AM378_21990 1e69319c7a8b41e8019215a840ab47a0 245 SUPERFAMILY SSF74653 148 243 5.23E-8 T 15-10-2018 AM378_21990 1e69319c7a8b41e8019215a840ab47a0 245 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 163 241 2.9E-5 T 15-10-2018 IPR037682 TonB, C-terminal GO:0055085 AM378_21990 1e69319c7a8b41e8019215a840ab47a0 245 Gene3D G3DSA:3.30.1150.10 90 244 1.9E-11 T 15-10-2018 AM378_21990 1e69319c7a8b41e8019215a840ab47a0 245 PRINTS PR01217 Proline rich extensin signature 50 71 8.9E-12 T 15-10-2018 AM378_21990 1e69319c7a8b41e8019215a840ab47a0 245 PRINTS PR01217 Proline rich extensin signature 71 87 8.9E-12 T 15-10-2018 AM378_21990 1e69319c7a8b41e8019215a840ab47a0 245 PRINTS PR01217 Proline rich extensin signature 110 135 8.9E-12 T 15-10-2018 AM378_21990 1e69319c7a8b41e8019215a840ab47a0 245 PRINTS PR01217 Proline rich extensin signature 90 107 8.9E-12 T 15-10-2018 AM378_10230 f491389065f524f5000450a2aab43c7c 209 Hamap MF_00982 Transcriptional regulatory protein RcsA [rcsA]. 1 209 50.698 T 15-10-2018 IPR030866 Transcriptional regulatory protein RcsA GO:0006355 AM378_10230 f491389065f524f5000450a2aab43c7c 209 SMART SM00421 137 194 3.9E-9 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM378_10230 f491389065f524f5000450a2aab43c7c 209 SUPERFAMILY SSF46894 132 188 4.42E-10 T 15-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AM378_10230 f491389065f524f5000450a2aab43c7c 209 Pfam PF00196 Bacterial regulatory proteins, luxR family 139 193 1.6E-17 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM378_10230 f491389065f524f5000450a2aab43c7c 209 Gene3D G3DSA:1.10.10.10 101 198 3.6E-10 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_10230 f491389065f524f5000450a2aab43c7c 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 140 154 1.2E-7 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM378_10230 f491389065f524f5000450a2aab43c7c 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 170 182 1.2E-7 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM378_10230 f491389065f524f5000450a2aab43c7c 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 154 170 1.2E-7 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM378_10230 f491389065f524f5000450a2aab43c7c 209 ProSitePatterns PS00622 LuxR-type HTH domain signature. 154 181 - T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM378_10450 4eaeeed2f848ec4ee498c280371b4e1b 3338 SUPERFAMILY SSF47336 3033 3103 1.83E-11 T 15-10-2018 IPR036736 ACP-like superfamily AM378_10450 4eaeeed2f848ec4ee498c280371b4e1b 3338 ProSitePatterns PS00455 Putative AMP-binding domain signature. 1629 1640 - T 15-10-2018 IPR020845 AMP-binding, conserved site AM378_10450 4eaeeed2f848ec4ee498c280371b4e1b 3338 Pfam PF00501 AMP-binding enzyme 2537 2935 1.8E-79 T 15-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 AM378_10450 4eaeeed2f848ec4ee498c280371b4e1b 3338 Pfam PF00501 AMP-binding enzyme 1491 1890 1.5E-83 T 15-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 AM378_10450 4eaeeed2f848ec4ee498c280371b4e1b 3338 Pfam PF00501 AMP-binding enzyme 449 845 2.2E-80 T 15-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 AM378_10450 4eaeeed2f848ec4ee498c280371b4e1b 3338 Gene3D G3DSA:3.30.300.30 2932 3026 3.8E-24 T 15-10-2018 AM378_10450 4eaeeed2f848ec4ee498c280371b4e1b 3338 Gene3D G3DSA:1.10.1200.10 942 1023 1.6E-17 T 15-10-2018 IPR036736 ACP-like superfamily AM378_10450 4eaeeed2f848ec4ee498c280371b4e1b 3338 SUPERFAMILY SSF52777 1040 1210 2.11E-35 T 15-10-2018 AM378_10450 4eaeeed2f848ec4ee498c280371b4e1b 3338 Gene3D G3DSA:3.30.559.10 1039 1403 1.3E-121 T 15-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 AM378_10450 4eaeeed2f848ec4ee498c280371b4e1b 3338 SUPERFAMILY SSF56801 410 965 3.27E-128 T 15-10-2018 AM378_10450 4eaeeed2f848ec4ee498c280371b4e1b 3338 SUPERFAMILY SSF53474 3109 3336 3.18E-30 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold AM378_10450 4eaeeed2f848ec4ee498c280371b4e1b 3338 Gene3D G3DSA:3.30.559.30 2259 2501 1.2E-113 T 15-10-2018 AM378_10450 4eaeeed2f848ec4ee498c280371b4e1b 3338 Gene3D G3DSA:3.30.559.30 174 422 2.4E-49 T 15-10-2018 AM378_10450 4eaeeed2f848ec4ee498c280371b4e1b 3338 SUPERFAMILY SSF47336 1987 2059 1.83E-13 T 15-10-2018 IPR036736 ACP-like superfamily AM378_10450 4eaeeed2f848ec4ee498c280371b4e1b 3338 Pfam PF00550 Phosphopantetheine attachment site 3042 3104 1.3E-5 T 15-10-2018 IPR009081 Phosphopantetheine binding ACP domain AM378_10450 4eaeeed2f848ec4ee498c280371b4e1b 3338 Pfam PF00550 Phosphopantetheine attachment site 956 1017 5.8E-10 T 15-10-2018 IPR009081 Phosphopantetheine binding ACP domain AM378_10450 4eaeeed2f848ec4ee498c280371b4e1b 3338 Pfam PF00550 Phosphopantetheine attachment site 1999 2059 1.5E-8 T 15-10-2018 IPR009081 Phosphopantetheine binding ACP domain AM378_10450 4eaeeed2f848ec4ee498c280371b4e1b 3338 Gene3D G3DSA:3.30.559.10 2080 2445 1.2E-113 T 15-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 AM378_10450 4eaeeed2f848ec4ee498c280371b4e1b 3338 SUPERFAMILY SSF52777 180 417 3.89E-20 T 15-10-2018 AM378_10450 4eaeeed2f848ec4ee498c280371b4e1b 3338 Pfam PF00668 Condensation domain 13 415 4.8E-25 T 15-10-2018 IPR001242 Condensation domain AM378_10450 4eaeeed2f848ec4ee498c280371b4e1b 3338 Pfam PF00668 Condensation domain 2076 2513 1.8E-78 T 15-10-2018 IPR001242 Condensation domain AM378_10450 4eaeeed2f848ec4ee498c280371b4e1b 3338 Pfam PF00668 Condensation domain 1037 1467 4.4E-93 T 15-10-2018 IPR001242 Condensation domain AM378_10450 4eaeeed2f848ec4ee498c280371b4e1b 3338 Gene3D G3DSA:3.30.559.10 8 358 2.4E-49 T 15-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 AM378_10450 4eaeeed2f848ec4ee498c280371b4e1b 3338 Gene3D G3DSA:3.30.300.30 1885 1980 2.7E-26 T 15-10-2018 AM378_10450 4eaeeed2f848ec4ee498c280371b4e1b 3338 SUPERFAMILY SSF56801 2494 3053 2.09E-130 T 15-10-2018 AM378_10450 4eaeeed2f848ec4ee498c280371b4e1b 3338 SUPERFAMILY SSF56801 1472 2005 3.79E-130 T 15-10-2018 AM378_10450 4eaeeed2f848ec4ee498c280371b4e1b 3338 Gene3D G3DSA:3.40.50.12780 436 840 6.3E-117 T 15-10-2018 AM378_10450 4eaeeed2f848ec4ee498c280371b4e1b 3338 Gene3D G3DSA:3.40.50.12780 1477 1884 1.3E-108 T 15-10-2018 AM378_10450 4eaeeed2f848ec4ee498c280371b4e1b 3338 Gene3D G3DSA:3.40.50.12780 2524 2930 4.4E-111 T 15-10-2018 AM378_10450 4eaeeed2f848ec4ee498c280371b4e1b 3338 Gene3D G3DSA:3.40.50.1820 3111 3338 7.8E-30 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold AM378_10450 4eaeeed2f848ec4ee498c280371b4e1b 3338 Gene3D G3DSA:3.30.300.30 841 941 5.9E-28 T 15-10-2018 AM378_10450 4eaeeed2f848ec4ee498c280371b4e1b 3338 ProSitePatterns PS00455 Putative AMP-binding domain signature. 2676 2687 - T 15-10-2018 IPR020845 AMP-binding, conserved site AM378_10450 4eaeeed2f848ec4ee498c280371b4e1b 3338 Gene3D G3DSA:3.30.559.30 1214 1456 1.3E-121 T 15-10-2018 AM378_10450 4eaeeed2f848ec4ee498c280371b4e1b 3338 ProSitePatterns PS00012 Phosphopantetheine attachment site. 976 991 - T 15-10-2018 IPR006162 Phosphopantetheine attachment site AM378_10450 4eaeeed2f848ec4ee498c280371b4e1b 3338 ProSitePatterns PS00455 Putative AMP-binding domain signature. 595 606 - T 15-10-2018 IPR020845 AMP-binding, conserved site AM378_10450 4eaeeed2f848ec4ee498c280371b4e1b 3338 SUPERFAMILY SSF52777 2081 2255 2.33E-29 T 15-10-2018 AM378_10450 4eaeeed2f848ec4ee498c280371b4e1b 3338 Pfam PF00975 Thioesterase domain 3125 3231 2.7E-16 T 15-10-2018 IPR001031 Thioesterase GO:0009058|GO:0016788 Reactome: R-HSA-75105 AM378_10450 4eaeeed2f848ec4ee498c280371b4e1b 3338 Gene3D G3DSA:1.10.1200.10 3027 3110 5.6E-16 T 15-10-2018 IPR036736 ACP-like superfamily AM378_10450 4eaeeed2f848ec4ee498c280371b4e1b 3338 Gene3D G3DSA:1.10.1200.10 1981 2067 2.8E-18 T 15-10-2018 IPR036736 ACP-like superfamily AM378_10450 4eaeeed2f848ec4ee498c280371b4e1b 3338 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 2557 2959 3.0E-111 T 15-10-2018 IPR010071 Amino acid adenylation domain AM378_10450 4eaeeed2f848ec4ee498c280371b4e1b 3338 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 469 870 5.0E-115 T 15-10-2018 IPR010071 Amino acid adenylation domain AM378_10450 4eaeeed2f848ec4ee498c280371b4e1b 3338 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 1510 1914 5.8E-110 T 15-10-2018 IPR010071 Amino acid adenylation domain AM378_10450 4eaeeed2f848ec4ee498c280371b4e1b 3338 Pfam PF13193 AMP-binding enzyme C-terminal domain 1899 1970 4.0E-9 T 15-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain AM378_10450 4eaeeed2f848ec4ee498c280371b4e1b 3338 Pfam PF13193 AMP-binding enzyme C-terminal domain 854 927 1.5E-6 T 15-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain AM378_10450 4eaeeed2f848ec4ee498c280371b4e1b 3338 SUPERFAMILY SSF52777 2262 2501 1.33E-51 T 15-10-2018 AM378_10450 4eaeeed2f848ec4ee498c280371b4e1b 3338 SMART SM00823 Phosphopantetheine attachment site 1994 2063 0.62 T 15-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 AM378_10450 4eaeeed2f848ec4ee498c280371b4e1b 3338 SMART SM00823 Phosphopantetheine attachment site 953 1021 0.0022 T 15-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 AM378_10450 4eaeeed2f848ec4ee498c280371b4e1b 3338 SUPERFAMILY SSF52777 1215 1463 1.78E-59 T 15-10-2018 AM378_10450 4eaeeed2f848ec4ee498c280371b4e1b 3338 SUPERFAMILY SSF47336 946 1018 2.75E-13 T 15-10-2018 IPR036736 ACP-like superfamily AM378_10450 4eaeeed2f848ec4ee498c280371b4e1b 3338 SUPERFAMILY SSF52777 8 165 5.0E-19 T 15-10-2018 AM378_17275 4acf4c07731a3261bb65d650e57e60fd 604 Hamap MF_02094 Phosphogluconate dehydratase [edd]. 2 603 57.887 T 15-10-2018 AM378_17275 4acf4c07731a3261bb65d650e57e60fd 604 Gene3D G3DSA:3.50.30.80 420 569 1.3E-50 T 15-10-2018 AM378_17275 4acf4c07731a3261bb65d650e57e60fd 604 SUPERFAMILY SSF52016 420 601 6.98E-58 T 15-10-2018 AM378_17275 4acf4c07731a3261bb65d650e57e60fd 604 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 155 165 - T 15-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 AM378_17275 4acf4c07731a3261bb65d650e57e60fd 604 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 506 517 - T 15-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 AM378_17275 4acf4c07731a3261bb65d650e57e60fd 604 SUPERFAMILY SSF143975 2 419 1.7E-143 T 15-10-2018 IPR037237 IlvD/EDD, N-terminal domain KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 AM378_17275 4acf4c07731a3261bb65d650e57e60fd 604 TIGRFAM TIGR01196 edd: phosphogluconate dehydratase 4 603 0.0 T 15-10-2018 IPR004786 6-phosphogluconate dehydratase GO:0004456|GO:0009255 KEGG: 00030+4.2.1.12 AM378_17275 4acf4c07731a3261bb65d650e57e60fd 604 Pfam PF00920 Dehydratase family 68 599 6.0E-158 T 15-10-2018 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 AM378_03155 8f5da6f05ad0f5143992d4464d9e42c4 190 Gene3D G3DSA:1.10.260.40 5 76 9.7E-24 T 15-10-2018 AM378_03155 8f5da6f05ad0f5143992d4464d9e42c4 190 Pfam PF16452 Bacteriophage CI repressor C-terminal domain 84 182 1.3E-27 T 15-10-2018 IPR032499 Bacteriophage CI repressor, C-terminal GO:0051259 AM378_03155 8f5da6f05ad0f5143992d4464d9e42c4 190 Pfam PF07022 Bacteriophage CI repressor helix-turn-helix domain 11 75 3.0E-26 T 15-10-2018 IPR010744 Bacteriophage CI repressor GO:0003677|GO:0045892 AM378_03155 8f5da6f05ad0f5143992d4464d9e42c4 190 Gene3D G3DSA:2.10.109.10 77 189 1.9E-29 T 15-10-2018 AM378_03655 049a510f3ba1710f662754c25a8808bf 708 Gene3D G3DSA:3.30.750.80 394 485 6.0E-37 T 15-10-2018 AM378_03655 049a510f3ba1710f662754c25a8808bf 708 Pfam PF01170 Putative RNA methylase family UPF0020 162 375 3.9E-62 T 15-10-2018 IPR000241 Putative RNA methylase domain AM378_03655 049a510f3ba1710f662754c25a8808bf 708 Hamap MF_01858 Ribosomal RNA large subunit methyltransferase K/L [rlmL]. 4 704 32.67 T 15-10-2018 IPR017244 Ribosomal RNA large subunit methyltransferase K/L GO:0005737|GO:0008990|GO:0031167 AM378_03655 049a510f3ba1710f662754c25a8808bf 708 PIRSF PIRSF037618 1 705 2.0E-298 T 15-10-2018 IPR017244 Ribosomal RNA large subunit methyltransferase K/L GO:0005737|GO:0008990|GO:0031167 AM378_03655 049a510f3ba1710f662754c25a8808bf 708 Gene3D G3DSA:3.40.50.150 486 704 4.1E-76 T 15-10-2018 AM378_03655 049a510f3ba1710f662754c25a8808bf 708 Pfam PF02926 THUMP domain 23 152 8.1E-16 T 15-10-2018 IPR004114 THUMP domain GO:0003723 AM378_03655 049a510f3ba1710f662754c25a8808bf 708 Gene3D G3DSA:3.30.2130.30 5 255 5.6E-148 T 15-10-2018 AM378_03655 049a510f3ba1710f662754c25a8808bf 708 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 306 312 - T 15-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 AM378_03655 049a510f3ba1710f662754c25a8808bf 708 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 440 662 2.1E-19 T 15-10-2018 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 AM378_03655 049a510f3ba1710f662754c25a8808bf 708 SUPERFAMILY SSF53335 397 703 3.96E-68 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM378_03655 049a510f3ba1710f662754c25a8808bf 708 SUPERFAMILY SSF53335 146 372 7.76E-41 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM378_03655 049a510f3ba1710f662754c25a8808bf 708 Gene3D G3DSA:3.40.50.150 169 372 5.6E-148 T 15-10-2018 AM378_03655 049a510f3ba1710f662754c25a8808bf 708 ProSitePatterns PS01261 Uncharacterized protein family UPF0020 signature. 195 206 - T 15-10-2018 IPR000241 Putative RNA methylase domain AM378_03655 049a510f3ba1710f662754c25a8808bf 708 SMART SM00981 56 154 1.0E-18 T 15-10-2018 IPR004114 THUMP domain GO:0003723 AM378_18305 fbfb0cd18757acc3b857530a1ac5401c 257 Gene3D G3DSA:3.40.50.720 1 257 1.4E-65 T 15-10-2018 AM378_18305 fbfb0cd18757acc3b857530a1ac5401c 257 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 9 190 0.0075 T 15-10-2018 AM378_18305 fbfb0cd18757acc3b857530a1ac5401c 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 180 197 2.0E-14 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_18305 fbfb0cd18757acc3b857530a1ac5401c 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 159 178 2.0E-14 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_18305 fbfb0cd18757acc3b857530a1ac5401c 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 10 27 2.0E-14 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_18305 fbfb0cd18757acc3b857530a1ac5401c 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 88 99 2.0E-14 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_18305 fbfb0cd18757acc3b857530a1ac5401c 257 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 16 255 1.9E-41 T 15-10-2018 AM378_18305 fbfb0cd18757acc3b857530a1ac5401c 257 SUPERFAMILY SSF51735 5 256 6.48E-50 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily AM378_03235 67096cc6c79e21c525d6596a3bbba1bc 159 Pfam PF10767 Protein of unknown function (DUF2593) 17 156 3.2E-64 T 15-10-2018 IPR019703 Protein of unknown function DUF2593 AM378_18330 3b87a5c1f022cedb5051b64dbf90f1a9 145 SUPERFAMILY SSF52402 3 139 1.0E-31 T 15-10-2018 AM378_18330 3b87a5c1f022cedb5051b64dbf90f1a9 145 Pfam PF00582 Universal stress protein family 3 138 1.5E-20 T 15-10-2018 IPR006016 UspA AM378_18330 3b87a5c1f022cedb5051b64dbf90f1a9 145 Gene3D G3DSA:3.40.50.620 2 142 4.5E-51 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM378_18330 3b87a5c1f022cedb5051b64dbf90f1a9 145 PIRSF PIRSF006276 1 141 7.6E-54 T 15-10-2018 IPR006015 Universal stress protein A AM378_15915 6329ad3be83bf187ba6615eada7f02e0 244 Pfam PF01553 Acyltransferase 61 180 8.5E-33 T 15-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 AM378_15915 6329ad3be83bf187ba6615eada7f02e0 244 TIGRFAM TIGR00530 AGP_acyltrn: 1-acylglycerol-3-phosphate O-acyltransferases 50 180 4.2E-48 T 15-10-2018 IPR004552 1-acyl-sn-glycerol-3-phosphate acyltransferase GO:0003841|GO:0008654|GO:0016020 KEGG: 00561+2.3.1.51|KEGG: 00564+2.3.1.51|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7417|MetaCyc: PWY-7587|MetaCyc: PWY-7589|MetaCyc: PWY-7782|Reactome: R-HSA-1483166 AM378_15915 6329ad3be83bf187ba6615eada7f02e0 244 SMART SM00563 67 182 3.4E-38 T 15-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 AM378_15915 6329ad3be83bf187ba6615eada7f02e0 244 SUPERFAMILY SSF69593 2 238 4.71E-61 T 15-10-2018 AM378_18965 03ffe2b4e7ddad27f8ef8fdb5ae1e84f 55 ProSitePatterns PS00582 Ribosomal protein L33 signature. 21 40 - T 15-10-2018 IPR018264 Ribosomal protein L33, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM378_18965 03ffe2b4e7ddad27f8ef8fdb5ae1e84f 55 SUPERFAMILY SSF57829 1 53 4.39E-20 T 15-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 AM378_18965 03ffe2b4e7ddad27f8ef8fdb5ae1e84f 55 Gene3D G3DSA:2.20.28.120 1 55 2.6E-31 T 15-10-2018 IPR038584 Ribosomal protein L33 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM378_18965 03ffe2b4e7ddad27f8ef8fdb5ae1e84f 55 Pfam PF00471 Ribosomal protein L33 7 53 1.2E-18 T 15-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM378_18965 03ffe2b4e7ddad27f8ef8fdb5ae1e84f 55 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 1 55 2.6E-27 T 15-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM378_18965 03ffe2b4e7ddad27f8ef8fdb5ae1e84f 55 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 5 53 15.87 T 15-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM378_07710 53f335321bcbf85b1ba0acce4c62d714 235 Gene3D G3DSA:3.40.630.10 1 235 4.0E-55 T 15-10-2018 AM378_07710 53f335321bcbf85b1ba0acce4c62d714 235 SUPERFAMILY SSF53187 18 215 3.31E-32 T 15-10-2018 AM378_07710 53f335321bcbf85b1ba0acce4c62d714 235 Pfam PF00246 Zinc carboxypeptidase 43 157 4.4E-12 T 15-10-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 AM378_06265 46154cb488fde878bd4f076dbac96e7d 699 Pfam PF00005 ABC transporter 511 658 9.9E-32 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM378_06265 46154cb488fde878bd4f076dbac96e7d 699 ProSitePatterns PS00211 ABC transporters family signature. 630 644 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM378_06265 46154cb488fde878bd4f076dbac96e7d 699 Pfam PF00664 ABC transporter transmembrane region 177 443 7.7E-45 T 15-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 AM378_06265 46154cb488fde878bd4f076dbac96e7d 699 Pfam PF03412 Peptidase C39 family 21 149 9.2E-33 T 15-10-2018 IPR005074 Peptidase C39, bacteriocin processing GO:0005524|GO:0006508|GO:0008233|GO:0016021 AM378_06265 46154cb488fde878bd4f076dbac96e7d 699 Gene3D G3DSA:3.40.50.300 485 699 3.1E-70 T 15-10-2018 AM378_06265 46154cb488fde878bd4f076dbac96e7d 699 SUPERFAMILY SSF52540 489 698 8.64E-65 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_06265 46154cb488fde878bd4f076dbac96e7d 699 SUPERFAMILY SSF90123 164 470 1.96E-57 T 15-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 AM378_06265 46154cb488fde878bd4f076dbac96e7d 699 SMART SM00382 518 699 1.7E-16 T 15-10-2018 IPR003593 AAA+ ATPase domain AM378_06265 46154cb488fde878bd4f076dbac96e7d 699 Gene3D G3DSA:1.20.1560.10 161 477 1.3E-60 T 15-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 AM378_06265 46154cb488fde878bd4f076dbac96e7d 699 Gene3D G3DSA:3.90.70.10 11 157 2.2E-37 T 15-10-2018 AM378_24240 a3700596e742176ce261090d1b6b8710 156 TIGRFAM TIGR00114 lumazine-synth: 6,7-dimethyl-8-ribityllumazine synthase 14 150 1.2E-58 T 15-10-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AM378_24240 a3700596e742176ce261090d1b6b8710 156 Hamap MF_00178 6,7-dimethyl-8-ribityllumazine synthase [ribH]. 8 154 31.768 T 15-10-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AM378_24240 a3700596e742176ce261090d1b6b8710 156 SUPERFAMILY SSF52121 3 154 6.54E-59 T 15-10-2018 IPR036467 Lumazine/riboflavin synthase superfamily GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AM378_24240 a3700596e742176ce261090d1b6b8710 156 Gene3D G3DSA:3.40.50.960 1 156 3.3E-63 T 15-10-2018 IPR036467 Lumazine/riboflavin synthase superfamily GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AM378_24240 a3700596e742176ce261090d1b6b8710 156 Pfam PF00885 6,7-dimethyl-8-ribityllumazine synthase 13 151 3.0E-55 T 15-10-2018 IPR002180 Lumazine/riboflavin synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AM378_11805 9865ffac1010796f33d48eaacf9ec966 314 Gene3D G3DSA:1.10.10.10 8 92 3.5E-23 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_11805 9865ffac1010796f33d48eaacf9ec966 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 49 5.8E-6 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_11805 9865ffac1010796f33d48eaacf9ec966 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 28 39 5.8E-6 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_11805 9865ffac1010796f33d48eaacf9ec966 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 49 60 5.8E-6 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_11805 9865ffac1010796f33d48eaacf9ec966 314 SUPERFAMILY SSF46785 10 119 4.08E-21 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM378_11805 9865ffac1010796f33d48eaacf9ec966 314 Pfam PF03466 LysR substrate binding domain 97 275 1.5E-30 T 15-10-2018 IPR005119 LysR, substrate-binding AM378_11805 9865ffac1010796f33d48eaacf9ec966 314 Gene3D G3DSA:3.40.190.10 169 262 1.6E-57 T 15-10-2018 AM378_11805 9865ffac1010796f33d48eaacf9ec966 314 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 13 71 2.0E-17 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_11805 9865ffac1010796f33d48eaacf9ec966 314 SUPERFAMILY SSF53850 96 270 6.73E-32 T 15-10-2018 AM378_11805 9865ffac1010796f33d48eaacf9ec966 314 Gene3D G3DSA:3.40.190.10 103 269 1.6E-57 T 15-10-2018 AM378_10840 8b0fee38559372b11cfde5304e2cc0e9 356 SUPERFAMILY SSF52374 146 335 8.44E-23 T 15-10-2018 AM378_10840 8b0fee38559372b11cfde5304e2cc0e9 356 PIRSF PIRSF005751 1 348 1.9E-127 T 15-10-2018 IPR005216 Citrate lyase ligase GO:0008771 AM378_10840 8b0fee38559372b11cfde5304e2cc0e9 356 SUPERFAMILY SSF55729 32 118 5.77E-11 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase AM378_10840 8b0fee38559372b11cfde5304e2cc0e9 356 Pfam PF08218 Citrate lyase ligase C-terminal domain 147 333 1.1E-76 T 15-10-2018 IPR013166 Citrate lyase ligase, C-terminal GO:0008771 AM378_10840 8b0fee38559372b11cfde5304e2cc0e9 356 ProDom PD016147 LIGASE LYASE CITRATE PRO-3S-LYASE SYNTHETASE TRANSFERASE CYTIDYLTRANSFERASE-RELATED:CITRATE ACETATE:SH-CITRATE CITC PLASMID 113 336 2.0E-93 T 15-10-2018 AM378_10840 8b0fee38559372b11cfde5304e2cc0e9 356 SMART SM00764 147 333 8.5E-122 T 15-10-2018 IPR013166 Citrate lyase ligase, C-terminal GO:0008771 AM378_10840 8b0fee38559372b11cfde5304e2cc0e9 356 Gene3D G3DSA:3.40.630.30 4 117 3.0E-8 T 15-10-2018 AM378_10840 8b0fee38559372b11cfde5304e2cc0e9 356 Gene3D G3DSA:3.40.50.620 145 323 1.6E-15 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM378_10840 8b0fee38559372b11cfde5304e2cc0e9 356 TIGRFAM TIGR00124 cit_ly_ligase: [citrate (pro-3S)-lyase] ligase 7 339 3.8E-148 T 15-10-2018 IPR005216 Citrate lyase ligase GO:0008771 AM378_10840 8b0fee38559372b11cfde5304e2cc0e9 356 Pfam PF00583 Acetyltransferase (GNAT) family 45 110 2.3E-4 T 15-10-2018 IPR000182 GNAT domain AM378_10840 8b0fee38559372b11cfde5304e2cc0e9 356 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 147 205 4.5E-9 T 15-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 AM378_02085 89ff186c68fcc63d6b1d4560e00d5e49 172 Pfam PF13673 Acetyltransferase (GNAT) domain 56 149 2.3E-13 T 15-10-2018 IPR000182 GNAT domain AM378_02085 89ff186c68fcc63d6b1d4560e00d5e49 172 SUPERFAMILY SSF55729 16 170 6.15E-28 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase AM378_02085 89ff186c68fcc63d6b1d4560e00d5e49 172 Gene3D G3DSA:3.40.630.30 1 172 1.2E-47 T 15-10-2018 AM378_05585 efffda1e27ac80d810fae898c61f8785 114 Pfam PF00892 EamA-like transporter family 25 111 2.7E-9 T 15-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AM378_05585 efffda1e27ac80d810fae898c61f8785 114 SUPERFAMILY SSF103481 36 113 4.45E-13 T 15-10-2018 AM378_05585 efffda1e27ac80d810fae898c61f8785 114 Hamap MF_01869 Probable 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE [arnE]. 2 114 31.617 T 15-10-2018 IPR022883 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase, subunit ArnE AM378_05585 efffda1e27ac80d810fae898c61f8785 114 Gene3D G3DSA:1.10.3730.20 33 114 6.8E-7 T 15-10-2018 AM378_07150 45554e75f52d4b4dc0b193c269c21adc 557 Gene3D G3DSA:1.10.246.130 252 365 3.1E-33 T 15-10-2018 AM378_07150 45554e75f52d4b4dc0b193c269c21adc 557 SUPERFAMILY SSF56235 28 553 2.32E-168 T 15-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AM378_07150 45554e75f52d4b4dc0b193c269c21adc 557 TIGRFAM TIGR00066 g_glut_trans: gamma-glutamyltransferase 32 547 5.4E-150 T 15-10-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-4061|MetaCyc: PWY-5826|MetaCyc: PWY-6842|MetaCyc: PWY-7112|MetaCyc: PWY-7559 AM378_07150 45554e75f52d4b4dc0b193c269c21adc 557 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 236 252 4.1E-72 T 15-10-2018 AM378_07150 45554e75f52d4b4dc0b193c269c21adc 557 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 266 285 4.1E-72 T 15-10-2018 AM378_07150 45554e75f52d4b4dc0b193c269c21adc 557 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 364 382 4.1E-72 T 15-10-2018 AM378_07150 45554e75f52d4b4dc0b193c269c21adc 557 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 388 406 4.1E-72 T 15-10-2018 AM378_07150 45554e75f52d4b4dc0b193c269c21adc 557 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 124 142 4.1E-72 T 15-10-2018 AM378_07150 45554e75f52d4b4dc0b193c269c21adc 557 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 429 444 4.1E-72 T 15-10-2018 AM378_07150 45554e75f52d4b4dc0b193c269c21adc 557 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 52 77 4.1E-72 T 15-10-2018 AM378_07150 45554e75f52d4b4dc0b193c269c21adc 557 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 142 161 4.1E-72 T 15-10-2018 AM378_07150 45554e75f52d4b4dc0b193c269c21adc 557 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 453 470 4.1E-72 T 15-10-2018 AM378_07150 45554e75f52d4b4dc0b193c269c21adc 557 Gene3D G3DSA:3.60.20.40 366 552 3.7E-62 T 15-10-2018 AM378_07150 45554e75f52d4b4dc0b193c269c21adc 557 ProSitePatterns PS00462 Gamma-glutamyltranspeptidase signature. 364 388 - T 15-10-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-4061|MetaCyc: PWY-5826|MetaCyc: PWY-6842|MetaCyc: PWY-7112|MetaCyc: PWY-7559 AM378_07150 45554e75f52d4b4dc0b193c269c21adc 557 Pfam PF01019 Gamma-glutamyltranspeptidase 45 550 9.0E-169 T 15-10-2018 AM378_22845 76951a72601e1a8d97dc0ca1d3fce81a 491 SUPERFAMILY SSF53244 323 477 1.54E-47 T 15-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AM378_22845 76951a72601e1a8d97dc0ca1d3fce81a 491 Pfam PF02875 Mur ligase family, glutamate ligase domain 326 418 2.0E-21 T 15-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 AM378_22845 76951a72601e1a8d97dc0ca1d3fce81a 491 Hamap MF_00046 UDP-N-acetylmuramate--L-alanine ligase [murC]. 19 481 43.927 T 15-10-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 AM378_22845 76951a72601e1a8d97dc0ca1d3fce81a 491 TIGRFAM TIGR01082 murC: UDP-N-acetylmuramate--L-alanine ligase 21 475 1.8E-184 T 15-10-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 AM378_22845 76951a72601e1a8d97dc0ca1d3fce81a 491 Gene3D G3DSA:3.40.1190.10 108 324 6.2E-89 T 15-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 AM378_22845 76951a72601e1a8d97dc0ca1d3fce81a 491 Gene3D G3DSA:3.40.50.720 20 107 9.6E-34 T 15-10-2018 AM378_22845 76951a72601e1a8d97dc0ca1d3fce81a 491 Pfam PF08245 Mur ligase middle domain 124 304 1.5E-26 T 15-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 AM378_22845 76951a72601e1a8d97dc0ca1d3fce81a 491 Gene3D G3DSA:3.90.190.20 325 491 2.6E-50 T 15-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AM378_22845 76951a72601e1a8d97dc0ca1d3fce81a 491 SUPERFAMILY SSF51984 20 106 1.7E-29 T 15-10-2018 AM378_22845 76951a72601e1a8d97dc0ca1d3fce81a 491 SUPERFAMILY SSF53623 105 322 1.83E-74 T 15-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 AM378_22845 76951a72601e1a8d97dc0ca1d3fce81a 491 Pfam PF01225 Mur ligase family, catalytic domain 21 118 8.6E-30 T 15-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 AM378_10925 d079565e49579b9e98e67d140c0f8635 276 PRINTS PR00111 Alpha/beta hydrolase fold signature 49 64 4.3E-10 T 15-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AM378_10925 d079565e49579b9e98e67d140c0f8635 276 PRINTS PR00111 Alpha/beta hydrolase fold signature 219 233 4.3E-10 T 15-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AM378_10925 d079565e49579b9e98e67d140c0f8635 276 PRINTS PR00111 Alpha/beta hydrolase fold signature 93 106 4.3E-10 T 15-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AM378_10925 d079565e49579b9e98e67d140c0f8635 276 Pfam PF00561 alpha/beta hydrolase fold 24 256 2.7E-23 T 15-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AM378_10925 d079565e49579b9e98e67d140c0f8635 276 Gene3D G3DSA:3.40.50.1820 1 275 1.3E-94 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold AM378_10925 d079565e49579b9e98e67d140c0f8635 276 SUPERFAMILY SSF53474 1 275 1.39E-66 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold AM378_10880 61a5149aa9fa2185da5c5bc2fc25a7ab 242 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 207 219 2.4E-10 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM378_10880 61a5149aa9fa2185da5c5bc2fc25a7ab 242 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 177 191 2.4E-10 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM378_10880 61a5149aa9fa2185da5c5bc2fc25a7ab 242 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 191 207 2.4E-10 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM378_10880 61a5149aa9fa2185da5c5bc2fc25a7ab 242 Pfam PF00196 Bacterial regulatory proteins, luxR family 176 231 3.9E-16 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM378_10880 61a5149aa9fa2185da5c5bc2fc25a7ab 242 TIGRFAM TIGR03541 reg_near_HchA: LuxR family transcriptional regulatory, chaperone HchA-associated 7 237 2.0E-99 T 15-10-2018 IPR019941 Transcription regulator LuxR, chaperone HchA-associated AM378_10880 61a5149aa9fa2185da5c5bc2fc25a7ab 242 Pfam PF03472 Autoinducer binding domain 25 161 1.3E-15 T 15-10-2018 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain AM378_10880 61a5149aa9fa2185da5c5bc2fc25a7ab 242 Gene3D G3DSA:3.30.450.80 10 167 1.5E-9 T 15-10-2018 IPR036693 Transcription factor LuxR-like, autoinducer-binding domain superfamily AM378_10880 61a5149aa9fa2185da5c5bc2fc25a7ab 242 SUPERFAMILY SSF46894 163 237 1.63E-18 T 15-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AM378_10880 61a5149aa9fa2185da5c5bc2fc25a7ab 242 SMART SM00421 174 231 1.3E-18 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM378_10880 61a5149aa9fa2185da5c5bc2fc25a7ab 242 SUPERFAMILY SSF75516 15 167 3.66E-14 T 15-10-2018 IPR036693 Transcription factor LuxR-like, autoinducer-binding domain superfamily AM378_10880 61a5149aa9fa2185da5c5bc2fc25a7ab 242 Gene3D G3DSA:1.10.10.10 170 237 2.3E-21 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_01855 7b4af811ccb90cc86462420cf40b2ad6 277 SMART SM00382 50 274 1.2E-7 T 15-10-2018 IPR003593 AAA+ ATPase domain AM378_01855 7b4af811ccb90cc86462420cf40b2ad6 277 TIGRFAM TIGR02315 ABC_phnC: phosphonate ABC transporter, ATP-binding protein 24 270 4.4E-90 T 15-10-2018 IPR012693 ABC transporter, phosphonate import, PhnC GO:0005524|GO:0015416|GO:0015716|GO:0016020 AM378_01855 7b4af811ccb90cc86462420cf40b2ad6 277 Pfam PF00005 ABC transporter 41 202 7.0E-31 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM378_01855 7b4af811ccb90cc86462420cf40b2ad6 277 ProSitePatterns PS00211 ABC transporters family signature. 174 188 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM378_01855 7b4af811ccb90cc86462420cf40b2ad6 277 Gene3D G3DSA:3.40.50.300 9 275 1.1E-61 T 15-10-2018 AM378_01855 7b4af811ccb90cc86462420cf40b2ad6 277 SUPERFAMILY SSF52540 24 263 1.54E-56 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_18960 189cd0eb9fef252ff117a9e5ae185330 271 SUPERFAMILY SSF81624 2 140 2.49E-41 T 15-10-2018 IPR035937 MutM-like, N-terminal AM378_18960 189cd0eb9fef252ff117a9e5ae185330 271 SMART SM01232 131 223 8.6E-50 T 15-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 AM378_18960 189cd0eb9fef252ff117a9e5ae185330 271 SMART SM00898 2 117 6.9E-51 T 15-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 AM378_18960 189cd0eb9fef252ff117a9e5ae185330 271 Gene3D G3DSA:3.20.190.10 2 130 2.7E-41 T 15-10-2018 IPR035937 MutM-like, N-terminal AM378_18960 189cd0eb9fef252ff117a9e5ae185330 271 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 1 116 8.1E-31 T 15-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 AM378_18960 189cd0eb9fef252ff117a9e5ae185330 271 SUPERFAMILY SSF46946 132 224 8.24E-30 T 15-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 AM378_18960 189cd0eb9fef252ff117a9e5ae185330 271 Hamap MF_00103 Formamidopyrimidine-DNA glycosylase [mutM]. 1 271 43.97 T 15-10-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 AM378_18960 189cd0eb9fef252ff117a9e5ae185330 271 ProSitePatterns PS01242 Zinc finger FPG-type signature. 246 270 - T 15-10-2018 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site GO:0003677|GO:0003906|GO:0006281|GO:0008270|GO:0016799 AM378_18960 189cd0eb9fef252ff117a9e5ae185330 271 Gene3D G3DSA:1.10.8.50 141 271 1.3E-49 T 15-10-2018 AM378_18960 189cd0eb9fef252ff117a9e5ae185330 271 SUPERFAMILY SSF57716 219 270 2.2E-17 T 15-10-2018 AM378_18960 189cd0eb9fef252ff117a9e5ae185330 271 TIGRFAM TIGR00577 fpg: DNA-formamidopyrimidine glycosylase 1 270 1.1E-101 T 15-10-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 AM378_18960 189cd0eb9fef252ff117a9e5ae185330 271 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 131 220 5.4E-28 T 15-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 AM378_18960 189cd0eb9fef252ff117a9e5ae185330 271 Pfam PF06827 Zinc finger found in FPG and IleRS 243 270 6.7E-11 T 15-10-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 AM378_19440 9314039fd3e075dfb9bbb6b68542e40a 804 Gene3D G3DSA:3.40.50.670 398 578 4.2E-74 T 15-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AM378_19440 9314039fd3e075dfb9bbb6b68542e40a 804 PRINTS PR01159 DNA gyrase subunit B signature 220 242 3.8E-80 T 15-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AM378_19440 9314039fd3e075dfb9bbb6b68542e40a 804 PRINTS PR01159 DNA gyrase subunit B signature 374 394 3.8E-80 T 15-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AM378_19440 9314039fd3e075dfb9bbb6b68542e40a 804 PRINTS PR01159 DNA gyrase subunit B signature 470 479 3.8E-80 T 15-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AM378_19440 9314039fd3e075dfb9bbb6b68542e40a 804 PRINTS PR01159 DNA gyrase subunit B signature 312 328 3.8E-80 T 15-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AM378_19440 9314039fd3e075dfb9bbb6b68542e40a 804 PRINTS PR01159 DNA gyrase subunit B signature 196 209 3.8E-80 T 15-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AM378_19440 9314039fd3e075dfb9bbb6b68542e40a 804 PRINTS PR01159 DNA gyrase subunit B signature 757 769 3.8E-80 T 15-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AM378_19440 9314039fd3e075dfb9bbb6b68542e40a 804 PRINTS PR01159 DNA gyrase subunit B signature 773 789 3.8E-80 T 15-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AM378_19440 9314039fd3e075dfb9bbb6b68542e40a 804 PRINTS PR01159 DNA gyrase subunit B signature 5 15 3.8E-80 T 15-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AM378_19440 9314039fd3e075dfb9bbb6b68542e40a 804 PRINTS PR01159 DNA gyrase subunit B signature 360 374 3.8E-80 T 15-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AM378_19440 9314039fd3e075dfb9bbb6b68542e40a 804 PRINTS PR01159 DNA gyrase subunit B signature 181 196 3.8E-80 T 15-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AM378_19440 9314039fd3e075dfb9bbb6b68542e40a 804 PRINTS PR00418 DNA topoisomerase II family signature 487 503 1.4E-70 T 15-10-2018 AM378_19440 9314039fd3e075dfb9bbb6b68542e40a 804 PRINTS PR00418 DNA topoisomerase II family signature 113 127 1.4E-70 T 15-10-2018 AM378_19440 9314039fd3e075dfb9bbb6b68542e40a 804 PRINTS PR00418 DNA topoisomerase II family signature 505 522 1.4E-70 T 15-10-2018 AM378_19440 9314039fd3e075dfb9bbb6b68542e40a 804 PRINTS PR00418 DNA topoisomerase II family signature 525 537 1.4E-70 T 15-10-2018 AM378_19440 9314039fd3e075dfb9bbb6b68542e40a 804 PRINTS PR00418 DNA topoisomerase II family signature 736 752 1.4E-70 T 15-10-2018 AM378_19440 9314039fd3e075dfb9bbb6b68542e40a 804 PRINTS PR00418 DNA topoisomerase II family signature 268 281 1.4E-70 T 15-10-2018 AM378_19440 9314039fd3e075dfb9bbb6b68542e40a 804 PRINTS PR00418 DNA topoisomerase II family signature 35 50 1.4E-70 T 15-10-2018 AM378_19440 9314039fd3e075dfb9bbb6b68542e40a 804 PRINTS PR00418 DNA topoisomerase II family signature 70 83 1.4E-70 T 15-10-2018 AM378_19440 9314039fd3e075dfb9bbb6b68542e40a 804 PRINTS PR00418 DNA topoisomerase II family signature 420 434 1.4E-70 T 15-10-2018 AM378_19440 9314039fd3e075dfb9bbb6b68542e40a 804 TIGRFAM TIGR01059 gyrB: DNA gyrase, B subunit 5 804 0.0 T 15-10-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AM378_19440 9314039fd3e075dfb9bbb6b68542e40a 804 Gene3D G3DSA:3.30.230.10 221 392 3.1E-75 T 15-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AM378_19440 9314039fd3e075dfb9bbb6b68542e40a 804 Gene3D G3DSA:3.30.565.10 1 220 1.1E-97 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AM378_19440 9314039fd3e075dfb9bbb6b68542e40a 804 SMART SM00433 35 797 3.7E-282 T 15-10-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AM378_19440 9314039fd3e075dfb9bbb6b68542e40a 804 Gene3D G3DSA:3.40.50.670 706 803 1.1E-26 T 15-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AM378_19440 9314039fd3e075dfb9bbb6b68542e40a 804 ProSitePatterns PS00177 DNA topoisomerase II signature. 422 430 - T 15-10-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AM378_19440 9314039fd3e075dfb9bbb6b68542e40a 804 SMART SM00387 31 175 1.9E-30 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AM378_19440 9314039fd3e075dfb9bbb6b68542e40a 804 SUPERFAMILY SSF56719 394 795 4.97E-86 T 15-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 AM378_19440 9314039fd3e075dfb9bbb6b68542e40a 804 SUPERFAMILY SSF55874 4 220 5.37E-77 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AM378_19440 9314039fd3e075dfb9bbb6b68542e40a 804 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 732 793 3.5E-30 T 15-10-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 AM378_19440 9314039fd3e075dfb9bbb6b68542e40a 804 Hamap MF_01898 DNA gyrase subunit B [gyrB]. 2 804 111.519 T 15-10-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AM378_19440 9314039fd3e075dfb9bbb6b68542e40a 804 Pfam PF01751 Toprim domain 419 531 1.5E-17 T 15-10-2018 IPR006171 TOPRIM domain AM378_19440 9314039fd3e075dfb9bbb6b68542e40a 804 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 32 172 1.1E-21 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AM378_19440 9314039fd3e075dfb9bbb6b68542e40a 804 Pfam PF00204 DNA gyrase B 221 390 8.8E-60 T 15-10-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AM378_19440 9314039fd3e075dfb9bbb6b68542e40a 804 Gene3D G3DSA:3.10.20.690 592 683 1.3E-36 T 15-10-2018 AM378_19440 9314039fd3e075dfb9bbb6b68542e40a 804 SUPERFAMILY SSF54211 221 392 2.09E-62 T 15-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AM378_17220 8a0cfd418945c2f0ce64ee0ba1cd131f 549 TIGRFAM TIGR01013 2a58: sodium-dependent inorganic phosphate (Pi) transporter 67 520 2.5E-122 T 15-10-2018 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 AM378_17220 8a0cfd418945c2f0ce64ee0ba1cd131f 549 Pfam PF02690 Na+/Pi-cotransporter 13 147 6.1E-35 T 15-10-2018 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 AM378_17220 8a0cfd418945c2f0ce64ee0ba1cd131f 549 Pfam PF02690 Na+/Pi-cotransporter 159 250 2.7E-8 T 15-10-2018 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 AM378_17220 8a0cfd418945c2f0ce64ee0ba1cd131f 549 SUPERFAMILY SSF109755 320 531 1.78E-26 T 15-10-2018 AM378_17220 8a0cfd418945c2f0ce64ee0ba1cd131f 549 Pfam PF01895 PhoU domain 340 422 1.9E-7 T 15-10-2018 IPR026022 PhoU domain AM378_17220 8a0cfd418945c2f0ce64ee0ba1cd131f 549 TIGRFAM TIGR00704 NaPi_cotrn_rel: Na/Pi-cotransporter II-related protein 1 306 1.8E-110 T 15-10-2018 IPR004633 Na/Pi-cotransporter II-related/YqeW-like protein GO:0016020 AM378_17220 8a0cfd418945c2f0ce64ee0ba1cd131f 549 Gene3D G3DSA:1.20.58.220 333 430 4.5E-7 T 15-10-2018 IPR038078 PhoU-like domain superfamily AM378_22730 045ca127af25eca7a8f12391d87593dc 398 TIGRFAM TIGR00899 2A0120: sugar efflux transporter 17 396 1.4E-157 T 15-10-2018 IPR004750 Sugar efflux GO:0005351|GO:0008643|GO:0016021 AM378_22730 045ca127af25eca7a8f12391d87593dc 398 Gene3D G3DSA:1.20.1250.20 215 397 7.2E-20 T 15-10-2018 AM378_22730 045ca127af25eca7a8f12391d87593dc 398 Gene3D G3DSA:1.20.1250.20 11 201 3.8E-21 T 15-10-2018 AM378_22730 045ca127af25eca7a8f12391d87593dc 398 Pfam PF07690 Major Facilitator Superfamily 19 307 1.2E-33 T 15-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM378_22730 045ca127af25eca7a8f12391d87593dc 398 SUPERFAMILY SSF103473 10 395 7.19E-52 T 15-10-2018 IPR036259 MFS transporter superfamily AM378_13260 026f5e429041ef29a27196814b018991 487 Hamap MF_01964 Inosine-5'-monophosphate dehydrogenase [guaB]. 8 486 84.323 T 15-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 AM378_13260 026f5e429041ef29a27196814b018991 487 TIGRFAM TIGR01302 IMP_dehydrog: inosine-5'-monophosphate dehydrogenase 8 454 5.8E-196 T 15-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 AM378_13260 026f5e429041ef29a27196814b018991 487 PIRSF PIRSF000130 1 487 7.9E-196 T 15-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 AM378_13260 026f5e429041ef29a27196814b018991 487 Gene3D G3DSA:3.20.20.70 1 486 1.1E-205 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM378_13260 026f5e429041ef29a27196814b018991 487 Pfam PF00571 CBS domain 95 140 1.7E-9 T 15-10-2018 IPR000644 CBS domain AM378_13260 026f5e429041ef29a27196814b018991 487 Pfam PF00571 CBS domain 149 202 1.1E-4 T 15-10-2018 IPR000644 CBS domain AM378_13260 026f5e429041ef29a27196814b018991 487 SUPERFAMILY SSF51412 1 477 1.01E-123 T 15-10-2018 AM378_13260 026f5e429041ef29a27196814b018991 487 SUPERFAMILY SSF54631 94 203 1.89E-25 T 15-10-2018 AM378_13260 026f5e429041ef29a27196814b018991 487 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 8 473 8.0E-160 T 15-10-2018 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 AM378_13260 026f5e429041ef29a27196814b018991 487 SMART SM01240 7 473 0.0 T 15-10-2018 AM378_13260 026f5e429041ef29a27196814b018991 487 SMART SM00116 158 206 4.8E-7 T 15-10-2018 IPR000644 CBS domain AM378_13260 026f5e429041ef29a27196814b018991 487 SMART SM00116 96 144 1.8E-11 T 15-10-2018 IPR000644 CBS domain AM378_13260 026f5e429041ef29a27196814b018991 487 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 295 307 - T 15-10-2018 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 AM378_18125 c1f670a2cc700ec6814e0d629aafb16e 643 Gene3D G3DSA:2.20.150.10 16 111 3.6E-91 T 15-10-2018 IPR023314 5-Dehydro-2-deoxygluconokinase-like superfamily KEGG: 00562+2.7.1.92 AM378_18125 c1f670a2cc700ec6814e0d629aafb16e 643 SUPERFAMILY SSF53613 7 331 9.2E-72 T 15-10-2018 IPR029056 Ribokinase-like AM378_18125 c1f670a2cc700ec6814e0d629aafb16e 643 Gene3D G3DSA:3.40.1190.20 11 314 3.6E-91 T 15-10-2018 IPR029056 Ribokinase-like AM378_18125 c1f670a2cc700ec6814e0d629aafb16e 643 Pfam PF00294 pfkB family carbohydrate kinase 9 324 1.2E-45 T 15-10-2018 IPR011611 Carbohydrate kinase PfkB AM378_18125 c1f670a2cc700ec6814e0d629aafb16e 643 TIGRFAM TIGR04382 myo_inos_iolC_N: 5-dehydro-2-deoxygluconokinase 7 332 1.6E-125 T 15-10-2018 IPR030830 5-Dehydro-2-deoxygluconokinase KEGG: 00562+2.7.1.92 AM378_18125 c1f670a2cc700ec6814e0d629aafb16e 643 Pfam PF09863 Uncharacterized protein conserved in bacteria (DUF2090) 327 635 5.5E-142 T 15-10-2018 IPR018659 Protein of unknown function DUF2090 AM378_18125 c1f670a2cc700ec6814e0d629aafb16e 643 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 276 289 - T 15-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 AM378_18125 c1f670a2cc700ec6814e0d629aafb16e 643 Gene3D G3DSA:3.20.20.70 343 635 1.6E-53 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM378_00120 a4039dccd0e019015127ab674e2dc69f 154 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 16 38 5.9E-9 T 15-10-2018 IPR012902 Prokaryotic N-terminal methylation site AM378_00120 a4039dccd0e019015127ab674e2dc69f 154 TIGRFAM TIGR01710 typeII_sec_gspG: type II secretion system protein G 17 147 1.1E-55 T 15-10-2018 IPR010054 General secretion pathway protein G GO:0008565|GO:0015627|GO:0015628 AM378_00120 a4039dccd0e019015127ab674e2dc69f 154 Pfam PF08334 Type II secretion system (T2SS), protein G 42 147 6.0E-37 T 15-10-2018 IPR013545 Type II secretion system protein G AM378_00120 a4039dccd0e019015127ab674e2dc69f 154 PRINTS PR00813 Bacterial general secretion pathway protein G signature 18 43 3.3E-22 T 15-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 AM378_00120 a4039dccd0e019015127ab674e2dc69f 154 PRINTS PR00813 Bacterial general secretion pathway protein G signature 54 72 3.3E-22 T 15-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 AM378_00120 a4039dccd0e019015127ab674e2dc69f 154 Pfam PF07963 Prokaryotic N-terminal methylation motif 13 37 1.8E-9 T 15-10-2018 IPR012902 Prokaryotic N-terminal methylation site AM378_00120 a4039dccd0e019015127ab674e2dc69f 154 SUPERFAMILY SSF54523 44 148 1.31E-36 T 15-10-2018 AM378_00120 a4039dccd0e019015127ab674e2dc69f 154 Gene3D G3DSA:3.30.700.10 32 147 1.1E-35 T 15-10-2018 AM378_00120 a4039dccd0e019015127ab674e2dc69f 154 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 17 37 - T 15-10-2018 IPR012902 Prokaryotic N-terminal methylation site AM378_05575 4f5fc304276bb79afa72ec08894ac7ce 301 SUPERFAMILY SSF88713 14 275 1.0E-32 T 15-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 AM378_05575 4f5fc304276bb79afa72ec08894ac7ce 301 Hamap MF_01870 Probable 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase ArnD [arnD]. 1 296 64.979 T 15-10-2018 IPR023557 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase ArnD, probable GO:0016811 AM378_05575 4f5fc304276bb79afa72ec08894ac7ce 301 Pfam PF01522 Polysaccharide deacetylase 15 170 7.5E-15 T 15-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 AM378_01170 d9082b020015e28fcfcf300ebb5df0c4 1066 Gene3D G3DSA:1.10.287.130 544 633 1.9E-18 T 15-10-2018 AM378_01170 d9082b020015e28fcfcf300ebb5df0c4 1066 SUPERFAMILY SSF53850 284 505 3.77E-32 T 15-10-2018 AM378_01170 d9082b020015e28fcfcf300ebb5df0c4 1066 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 51 251 2.4E-14 T 15-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AM378_01170 d9082b020015e28fcfcf300ebb5df0c4 1066 Pfam PF00512 His Kinase A (phospho-acceptor) domain 573 635 2.9E-13 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM378_01170 d9082b020015e28fcfcf300ebb5df0c4 1066 SUPERFAMILY SSF47384 558 636 2.35E-16 T 15-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AM378_01170 d9082b020015e28fcfcf300ebb5df0c4 1066 SUPERFAMILY SSF52172 820 937 1.42E-20 T 15-10-2018 IPR011006 CheY-like superfamily AM378_01170 d9082b020015e28fcfcf300ebb5df0c4 1066 Gene3D G3DSA:1.20.120.160 950 1062 7.1E-16 T 15-10-2018 IPR036641 HPT domain superfamily GO:0000160 AM378_01170 d9082b020015e28fcfcf300ebb5df0c4 1066 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 683 797 6.5E-28 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AM378_01170 d9082b020015e28fcfcf300ebb5df0c4 1066 Pfam PF01627 Hpt domain 971 1046 7.7E-9 T 15-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 AM378_01170 d9082b020015e28fcfcf300ebb5df0c4 1066 SMART SM00062 49 267 3.1E-4 T 15-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AM378_01170 d9082b020015e28fcfcf300ebb5df0c4 1066 SMART SM00062 292 509 2.3E-14 T 15-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AM378_01170 d9082b020015e28fcfcf300ebb5df0c4 1066 Gene3D G3DSA:3.30.565.10 634 800 2.6E-45 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AM378_01170 d9082b020015e28fcfcf300ebb5df0c4 1066 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 297 506 3.7E-23 T 15-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AM378_01170 d9082b020015e28fcfcf300ebb5df0c4 1066 Pfam PF00072 Response regulator receiver domain 823 933 2.5E-14 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM378_01170 d9082b020015e28fcfcf300ebb5df0c4 1066 Gene3D G3DSA:3.40.190.10 282 505 4.7E-40 T 15-10-2018 AM378_01170 d9082b020015e28fcfcf300ebb5df0c4 1066 SMART SM00448 819 935 3.4E-15 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM378_01170 d9082b020015e28fcfcf300ebb5df0c4 1066 Gene3D G3DSA:3.40.190.10 133 226 6.0E-34 T 15-10-2018 AM378_01170 d9082b020015e28fcfcf300ebb5df0c4 1066 PRINTS PR00344 Bacterial sensor protein C-terminal signature 723 737 5.9E-17 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM378_01170 d9082b020015e28fcfcf300ebb5df0c4 1066 PRINTS PR00344 Bacterial sensor protein C-terminal signature 758 776 5.9E-17 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM378_01170 d9082b020015e28fcfcf300ebb5df0c4 1066 PRINTS PR00344 Bacterial sensor protein C-terminal signature 782 795 5.9E-17 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM378_01170 d9082b020015e28fcfcf300ebb5df0c4 1066 PRINTS PR00344 Bacterial sensor protein C-terminal signature 741 751 5.9E-17 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM378_01170 d9082b020015e28fcfcf300ebb5df0c4 1066 SUPERFAMILY SSF47226 918 1051 2.62E-20 T 15-10-2018 IPR036641 HPT domain superfamily GO:0000160 AM378_01170 d9082b020015e28fcfcf300ebb5df0c4 1066 SMART SM00387 682 798 2.0E-35 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AM378_01170 d9082b020015e28fcfcf300ebb5df0c4 1066 Gene3D G3DSA:3.40.190.10 377 468 4.7E-40 T 15-10-2018 AM378_01170 d9082b020015e28fcfcf300ebb5df0c4 1066 SUPERFAMILY SSF55874 624 797 1.22E-42 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AM378_01170 d9082b020015e28fcfcf300ebb5df0c4 1066 Gene3D G3DSA:3.40.190.10 47 263 6.0E-34 T 15-10-2018 AM378_01170 d9082b020015e28fcfcf300ebb5df0c4 1066 Gene3D G3DSA:3.40.50.2300 814 943 4.0E-20 T 15-10-2018 AM378_01170 d9082b020015e28fcfcf300ebb5df0c4 1066 SMART SM00388 573 635 2.4E-15 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM378_01170 d9082b020015e28fcfcf300ebb5df0c4 1066 SMART SM00073 958 1054 5.0E-4 T 15-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 AM378_01170 d9082b020015e28fcfcf300ebb5df0c4 1066 SUPERFAMILY SSF53850 48 263 2.28E-22 T 15-10-2018 AM378_02090 f46ceb9e2b2bc6910e4f9f6c38a21503 276 Pfam PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) 33 246 3.3E-56 T 15-10-2018 IPR005519 Acid phosphatase, class B-like AM378_02090 f46ceb9e2b2bc6910e4f9f6c38a21503 276 TIGRFAM TIGR01533 lipo_e_P4: 5'-nucleotidase, lipoprotein e(P4) family 8 273 3.6E-87 T 15-10-2018 IPR006423 5-nucleotidase lipoprotein e(P4) GO:0009279 AM378_02090 f46ceb9e2b2bc6910e4f9f6c38a21503 276 PIRSF PIRSF019271 4 276 2.2E-99 T 15-10-2018 IPR006423 5-nucleotidase lipoprotein e(P4) GO:0009279 AM378_02090 f46ceb9e2b2bc6910e4f9f6c38a21503 276 SUPERFAMILY SSF56784 58 251 2.2E-36 T 15-10-2018 IPR036412 HAD-like superfamily AM378_02090 f46ceb9e2b2bc6910e4f9f6c38a21503 276 Gene3D G3DSA:3.40.50.1000 27 276 2.1E-92 T 15-10-2018 IPR023214 HAD superfamily AM378_19670 73406519736ee6df62d6e01cbb9f907a 464 Pfam PF03841 L-seryl-tRNA selenium transferase 83 451 8.7E-172 T 15-10-2018 IPR018319 L-seryl-tRNA selenium transferase-like KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1 AM378_19670 73406519736ee6df62d6e01cbb9f907a 464 SUPERFAMILY SSF53383 73 459 1.42E-47 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM378_19670 73406519736ee6df62d6e01cbb9f907a 464 TIGRFAM TIGR00474 selA: L-seryl-tRNA(Sec) selenium transferase 10 460 3.3E-184 T 15-10-2018 IPR004534 L-seryl-tRNA(Sec) selenium transferase GO:0001514|GO:0004125|GO:0005737 KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1 AM378_19670 73406519736ee6df62d6e01cbb9f907a 464 Gene3D G3DSA:3.40.640.10 95 359 5.5E-155 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AM378_19670 73406519736ee6df62d6e01cbb9f907a 464 Hamap MF_00423 L-seryl-tRNA(Sec) selenium transferase [selA]. 1 464 248.733 T 15-10-2018 IPR004534 L-seryl-tRNA(Sec) selenium transferase GO:0001514|GO:0004125|GO:0005737 KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1 AM378_19670 73406519736ee6df62d6e01cbb9f907a 464 Pfam PF12390 Selenocysteine synthase N terminal 9 48 3.4E-8 T 15-10-2018 IPR025862 L-seryl-tRNA selenium transferase N-terminal domain KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1 AM378_19670 73406519736ee6df62d6e01cbb9f907a 464 Gene3D G3DSA:3.90.1150.110 11 453 5.5E-155 T 15-10-2018 AM378_11550 3318bea6b855fdc1f8c31bc280929c2b 199 SUPERFAMILY SSF52172 4 158 1.42E-29 T 15-10-2018 IPR011006 CheY-like superfamily AM378_11550 3318bea6b855fdc1f8c31bc280929c2b 199 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 150 166 3.7E-11 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM378_11550 3318bea6b855fdc1f8c31bc280929c2b 199 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 166 178 3.7E-11 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM378_11550 3318bea6b855fdc1f8c31bc280929c2b 199 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 136 150 3.7E-11 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM378_11550 3318bea6b855fdc1f8c31bc280929c2b 199 Gene3D G3DSA:3.40.50.2300 1 129 7.5E-36 T 15-10-2018 AM378_11550 3318bea6b855fdc1f8c31bc280929c2b 199 SMART SM00421 133 190 1.3E-19 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM378_11550 3318bea6b855fdc1f8c31bc280929c2b 199 Gene3D G3DSA:1.10.10.10 130 191 1.4E-17 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_11550 3318bea6b855fdc1f8c31bc280929c2b 199 SMART SM00448 2 113 1.2E-23 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM378_11550 3318bea6b855fdc1f8c31bc280929c2b 199 Pfam PF00196 Bacterial regulatory proteins, luxR family 135 188 8.5E-17 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM378_11550 3318bea6b855fdc1f8c31bc280929c2b 199 Pfam PF00072 Response regulator receiver domain 4 113 1.8E-23 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM378_21025 6bb31cb372220a50a4526d8b3a9b1305 610 SMART SM00257 499 542 4.3E-13 T 15-10-2018 IPR018392 LysM domain AM378_21025 6bb31cb372220a50a4526d8b3a9b1305 610 SMART SM00257 565 608 4.4E-12 T 15-10-2018 IPR018392 LysM domain AM378_21025 6bb31cb372220a50a4526d8b3a9b1305 610 SUPERFAMILY SSF53187 224 448 2.7E-52 T 15-10-2018 AM378_21025 6bb31cb372220a50a4526d8b3a9b1305 610 Gene3D G3DSA:3.10.350.10 485 551 2.7E-13 T 15-10-2018 IPR036779 LysM domain superfamily AM378_21025 6bb31cb372220a50a4526d8b3a9b1305 610 Gene3D G3DSA:3.10.350.10 552 610 2.0E-14 T 15-10-2018 IPR036779 LysM domain superfamily AM378_21025 6bb31cb372220a50a4526d8b3a9b1305 610 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 226 445 1.6E-47 T 15-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 AM378_21025 6bb31cb372220a50a4526d8b3a9b1305 610 SMART SM00646 286 445 9.2E-71 T 15-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 AM378_21025 6bb31cb372220a50a4526d8b3a9b1305 610 SUPERFAMILY SSF54106 498 542 4.05E-9 T 15-10-2018 AM378_21025 6bb31cb372220a50a4526d8b3a9b1305 610 SUPERFAMILY SSF54106 565 608 3.4E-9 T 15-10-2018 AM378_21025 6bb31cb372220a50a4526d8b3a9b1305 610 Pfam PF11741 AMIN domain 35 122 3.0E-6 T 15-10-2018 IPR021731 AMIN domain AM378_21025 6bb31cb372220a50a4526d8b3a9b1305 610 Pfam PF01476 LysM domain 566 608 9.3E-11 T 15-10-2018 IPR018392 LysM domain AM378_21025 6bb31cb372220a50a4526d8b3a9b1305 610 Pfam PF01476 LysM domain 500 542 4.3E-12 T 15-10-2018 IPR018392 LysM domain AM378_21025 6bb31cb372220a50a4526d8b3a9b1305 610 Gene3D G3DSA:3.40.630.40 213 455 1.5E-69 T 15-10-2018 AM378_21025 6bb31cb372220a50a4526d8b3a9b1305 610 Gene3D G3DSA:2.60.40.3500 22 133 2.1E-12 T 15-10-2018 AM378_13675 77188b9462b86af7a15de54a1cf11da7 292 Hamap MF_00361 NAD kinase [nadK]. 6 287 33.388 T 15-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 AM378_13675 77188b9462b86af7a15de54a1cf11da7 292 Gene3D G3DSA:3.40.50.10330 23 287 1.9E-97 T 15-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 AM378_13675 77188b9462b86af7a15de54a1cf11da7 292 Gene3D G3DSA:2.60.200.30 128 264 1.9E-97 T 15-10-2018 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal GO:0003951|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 AM378_13675 77188b9462b86af7a15de54a1cf11da7 292 Pfam PF01513 ATP-NAD kinase 8 271 8.3E-75 T 15-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 AM378_13675 77188b9462b86af7a15de54a1cf11da7 292 SUPERFAMILY SSF111331 8 289 1.15E-92 T 15-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily AM378_01335 4df5279e3009f3c007138775884f4788 670 Gene3D G3DSA:3.40.50.300 275 414 6.7E-51 T 15-10-2018 AM378_01335 4df5279e3009f3c007138775884f4788 670 SUPERFAMILY SSF46600 623 666 2.09E-12 T 15-10-2018 IPR036876 UVR domain superfamily AM378_01335 4df5279e3009f3c007138775884f4788 670 SUPERFAMILY SSF52540 37 581 9.24E-36 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_01335 4df5279e3009f3c007138775884f4788 670 Pfam PF04851 Type III restriction enzyme, res subunit 11 92 1.9E-9 T 15-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 AM378_01335 4df5279e3009f3c007138775884f4788 670 Pfam PF12344 Ultra-violet resistance protein B 552 593 1.7E-20 T 15-10-2018 IPR024759 UvrB, YAD/RRR-motif-containing domain AM378_01335 4df5279e3009f3c007138775884f4788 670 TIGRFAM TIGR00631 uvrb: excinuclease ABC subunit B 5 663 0.0 T 15-10-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 AM378_01335 4df5279e3009f3c007138775884f4788 670 Gene3D G3DSA:3.40.50.300 1 240 1.6E-76 T 15-10-2018 AM378_01335 4df5279e3009f3c007138775884f4788 670 Hamap MF_00204 UvrABC system protein B [uvrB]. 3 665 43.752 T 15-10-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 AM378_01335 4df5279e3009f3c007138775884f4788 670 SUPERFAMILY SSF52540 3 415 5.8E-135 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_01335 4df5279e3009f3c007138775884f4788 670 Pfam PF02151 UvrB/uvrC motif 631 665 4.5E-9 T 15-10-2018 IPR001943 UVR domain GO:0005515 AM378_01335 4df5279e3009f3c007138775884f4788 670 SMART SM00490 460 546 8.9E-20 T 15-10-2018 IPR001650 Helicase, C-terminal AM378_01335 4df5279e3009f3c007138775884f4788 670 Gene3D G3DSA:4.10.860.10 625 670 2.7E-23 T 15-10-2018 AM378_01335 4df5279e3009f3c007138775884f4788 670 Pfam PF00271 Helicase conserved C-terminal domain 435 544 1.5E-17 T 15-10-2018 IPR001650 Helicase, C-terminal AM378_01335 4df5279e3009f3c007138775884f4788 670 Gene3D G3DSA:3.40.50.300 415 589 7.5E-49 T 15-10-2018 AM378_01335 4df5279e3009f3c007138775884f4788 670 SMART SM00487 9 425 9.0E-28 T 15-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AM378_05570 f19f8cdb6b28c8f17c4de3ee6a38e557 660 Gene3D G3DSA:3.40.50.720 314 658 1.4E-125 T 15-10-2018 AM378_05570 f19f8cdb6b28c8f17c4de3ee6a38e557 660 SUPERFAMILY SSF53328 1 202 1.31E-57 T 15-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AM378_05570 f19f8cdb6b28c8f17c4de3ee6a38e557 660 SUPERFAMILY SSF51735 317 651 1.39E-71 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily AM378_05570 f19f8cdb6b28c8f17c4de3ee6a38e557 660 SUPERFAMILY SSF50486 205 304 3.77E-23 T 15-10-2018 IPR011034 Formyl transferase-like, C-terminal domain superfamily GO:0003824 AM378_05570 f19f8cdb6b28c8f17c4de3ee6a38e557 660 Pfam PF00551 Formyl transferase 28 175 4.0E-25 T 15-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AM378_05570 f19f8cdb6b28c8f17c4de3ee6a38e557 660 Gene3D G3DSA:3.40.50.12230 1 304 1.6E-106 T 15-10-2018 AM378_05570 f19f8cdb6b28c8f17c4de3ee6a38e557 660 Pfam PF01370 NAD dependent epimerase/dehydratase family 318 566 1.3E-42 T 15-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 AM378_05570 f19f8cdb6b28c8f17c4de3ee6a38e557 660 Hamap MF_01166 Bifunctional polymyxin resistance protein ArnA [arnA]. 1 660 64.802 T 15-10-2018 IPR021168 Bifunctional polymyxin resistance protein, ArnA GO:0016742|GO:0055114 KEGG: 00520+2.1.2.13+1.1.1.305 AM378_05570 f19f8cdb6b28c8f17c4de3ee6a38e557 660 Pfam PF02911 Formyl transferase, C-terminal domain 203 283 3.1E-17 T 15-10-2018 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AM378_05570 f19f8cdb6b28c8f17c4de3ee6a38e557 660 PIRSF PIRSF036506 1 659 0.0 T 15-10-2018 IPR021168 Bifunctional polymyxin resistance protein, ArnA GO:0016742|GO:0055114 KEGG: 00520+2.1.2.13+1.1.1.305 AM378_16635 a056c924e6b9ea88f51acf5026ff48ea 184 TIGRFAM TIGR01670 KdsC-phosphatas: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family 22 175 6.5E-71 T 15-10-2018 IPR010023 KdsC family GO:0016788 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674 AM378_16635 a056c924e6b9ea88f51acf5026ff48ea 184 Gene3D G3DSA:3.40.50.1000 1 184 1.1E-59 T 15-10-2018 IPR023214 HAD superfamily AM378_16635 a056c924e6b9ea88f51acf5026ff48ea 184 SUPERFAMILY SSF56784 18 176 5.98E-42 T 15-10-2018 IPR036412 HAD-like superfamily AM378_16635 a056c924e6b9ea88f51acf5026ff48ea 184 PIRSF PIRSF006118 9 184 2.1E-74 T 15-10-2018 IPR010023 KdsC family GO:0016788 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674 AM378_16635 a056c924e6b9ea88f51acf5026ff48ea 184 Pfam PF08282 haloacid dehalogenase-like hydrolase 90 154 5.3E-9 T 15-10-2018 AM378_14295 e1b0dbc79eb13b13cc32da6525008440 252 Hamap MF_01139 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) [uppS]. 15 243 40.139 T 15-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 AM378_14295 e1b0dbc79eb13b13cc32da6525008440 252 Pfam PF01255 Putative undecaprenyl diphosphate synthase 22 242 3.1E-77 T 15-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 AM378_14295 e1b0dbc79eb13b13cc32da6525008440 252 Gene3D G3DSA:3.40.1180.10 2 244 1.0E-91 T 15-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 AM378_14295 e1b0dbc79eb13b13cc32da6525008440 252 TIGRFAM TIGR00055 uppS: di-trans,poly-cis-decaprenylcistransferase 16 242 1.2E-101 T 15-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 AM378_14295 e1b0dbc79eb13b13cc32da6525008440 252 ProSitePatterns PS01066 Undecaprenyl pyrophosphate synthase family signature. 188 205 - T 15-10-2018 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 Reactome: R-HSA-446199|Reactome: R-HSA-4755609 AM378_14295 e1b0dbc79eb13b13cc32da6525008440 252 SUPERFAMILY SSF64005 13 238 1.96E-86 T 15-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 AM378_01845 a4c3bc85417df890e8d3cbcc6ca2bed7 291 SUPERFAMILY SSF51735 1 159 4.9E-40 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily AM378_01845 a4c3bc85417df890e8d3cbcc6ca2bed7 291 SUPERFAMILY SSF48179 164 290 7.94E-23 T 15-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 AM378_01845 a4c3bc85417df890e8d3cbcc6ca2bed7 291 PIRSF PIRSF000103 1 291 1.6E-74 T 15-10-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 AM378_01845 a4c3bc85417df890e8d3cbcc6ca2bed7 291 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 2 158 1.3E-37 T 15-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 AM378_01845 a4c3bc85417df890e8d3cbcc6ca2bed7 291 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 164 283 4.9E-14 T 15-10-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 AM378_01845 a4c3bc85417df890e8d3cbcc6ca2bed7 291 Gene3D G3DSA:3.40.50.720 1 158 1.8E-45 T 15-10-2018 AM378_01845 a4c3bc85417df890e8d3cbcc6ca2bed7 291 Gene3D G3DSA:1.10.1040.10 159 291 8.8E-30 T 15-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AM378_23065 8411f04aade557355c8cfff2ad1f8a99 600 Gene3D G3DSA:1.20.990.10 281 385 1.8E-78 T 15-10-2018 IPR023173 NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain superfamily GO:0016491|GO:0055114 AM378_23065 8411f04aade557355c8cfff2ad1f8a99 600 SUPERFAMILY SSF63380 230 447 7.94E-66 T 15-10-2018 IPR017938 Riboflavin synthase-like beta-barrel AM378_23065 8411f04aade557355c8cfff2ad1f8a99 600 Pfam PF00175 Oxidoreductase NAD-binding domain 458 564 9.5E-20 T 15-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 AM378_23065 8411f04aade557355c8cfff2ad1f8a99 600 SUPERFAMILY SSF52343 445 600 4.71E-52 T 15-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AM378_23065 8411f04aade557355c8cfff2ad1f8a99 600 Gene3D G3DSA:3.40.50.80 446 600 5.0E-59 T 15-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AM378_23065 8411f04aade557355c8cfff2ad1f8a99 600 PRINTS PR00369 Flavodoxin signature 169 188 2.6E-14 T 15-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 AM378_23065 8411f04aade557355c8cfff2ad1f8a99 600 PRINTS PR00369 Flavodoxin signature 145 155 2.6E-14 T 15-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 AM378_23065 8411f04aade557355c8cfff2ad1f8a99 600 PRINTS PR00369 Flavodoxin signature 113 124 2.6E-14 T 15-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 AM378_23065 8411f04aade557355c8cfff2ad1f8a99 600 PRINTS PR00369 Flavodoxin signature 65 78 2.6E-14 T 15-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 AM378_23065 8411f04aade557355c8cfff2ad1f8a99 600 Hamap MF_01541 Sulfite reductase [NADPH] flavoprotein alpha-component [cysJ]. 2 600 52.418 T 15-10-2018 IPR029758 Sulphite reductase [NADPH] flavoprotein, alpha chain, Proteobacteria GO:0000103|GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AM378_23065 8411f04aade557355c8cfff2ad1f8a99 600 Pfam PF00258 Flavodoxin 66 192 3.1E-30 T 15-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 AM378_23065 8411f04aade557355c8cfff2ad1f8a99 600 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 526 542 1.2E-28 T 15-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AM378_23065 8411f04aade557355c8cfff2ad1f8a99 600 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 457 476 1.2E-28 T 15-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AM378_23065 8411f04aade557355c8cfff2ad1f8a99 600 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 482 491 1.2E-28 T 15-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AM378_23065 8411f04aade557355c8cfff2ad1f8a99 600 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 549 557 1.2E-28 T 15-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AM378_23065 8411f04aade557355c8cfff2ad1f8a99 600 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 271 281 1.2E-28 T 15-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AM378_23065 8411f04aade557355c8cfff2ad1f8a99 600 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 420 429 1.2E-28 T 15-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AM378_23065 8411f04aade557355c8cfff2ad1f8a99 600 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 387 394 1.2E-28 T 15-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AM378_23065 8411f04aade557355c8cfff2ad1f8a99 600 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 495 506 1.2E-28 T 15-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AM378_23065 8411f04aade557355c8cfff2ad1f8a99 600 PIRSF PIRSF000207 1 600 5.8E-278 T 15-10-2018 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AM378_23065 8411f04aade557355c8cfff2ad1f8a99 600 Gene3D G3DSA:3.40.50.360 55 217 2.6E-45 T 15-10-2018 IPR029039 Flavoprotein-like superfamily AM378_23065 8411f04aade557355c8cfff2ad1f8a99 600 TIGRFAM TIGR01931 cysJ: sulfite reductase [NADPH] flavoprotein, alpha-component 10 600 1.6E-275 T 15-10-2018 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AM378_23065 8411f04aade557355c8cfff2ad1f8a99 600 SUPERFAMILY SSF52218 62 208 7.98E-43 T 15-10-2018 IPR029039 Flavoprotein-like superfamily AM378_23065 8411f04aade557355c8cfff2ad1f8a99 600 Pfam PF00667 FAD binding domain 231 425 3.0E-27 T 15-10-2018 IPR003097 Sulfite reductase [NADPH] flavoprotein alpha-component-like, FAD-binding GO:0016491|GO:0055114 AM378_23065 8411f04aade557355c8cfff2ad1f8a99 600 Gene3D G3DSA:2.40.30.10 233 440 1.8E-78 T 15-10-2018 AM378_06040 089a1c1388b2d3a02f93bb18836636fa 346 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 5 121 2.9E-24 T 15-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 AM378_06040 089a1c1388b2d3a02f93bb18836636fa 346 Gene3D G3DSA:3.40.50.720 5 316 2.6E-137 T 15-10-2018 AM378_06040 089a1c1388b2d3a02f93bb18836636fa 346 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 134 241 2.4E-17 T 15-10-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 AM378_06040 089a1c1388b2d3a02f93bb18836636fa 346 Gene3D G3DSA:3.30.360.10 127 329 2.6E-137 T 15-10-2018 AM378_06040 089a1c1388b2d3a02f93bb18836636fa 346 SUPERFAMILY SSF51735 3 195 1.74E-50 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily AM378_01805 910a418160df1cfaaff28e76ab10790a 214 Gene3D G3DSA:1.10.10.60 9 78 3.7E-27 T 15-10-2018 AM378_01805 910a418160df1cfaaff28e76ab10790a 214 SUPERFAMILY SSF46689 12 94 2.15E-17 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AM378_01805 910a418160df1cfaaff28e76ab10790a 214 SUPERFAMILY SSF48498 92 205 2.38E-26 T 15-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AM378_01805 910a418160df1cfaaff28e76ab10790a 214 Gene3D G3DSA:1.10.357.10 79 209 3.7E-30 T 15-10-2018 AM378_01805 910a418160df1cfaaff28e76ab10790a 214 Pfam PF00440 Bacterial regulatory proteins, tetR family 25 70 1.3E-12 T 15-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM378_02895 fd54987a4aef93e4cad9bcc182a1e79e 245 Hamap MF_01014 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase [hisA]. 1 241 35.642 T 15-10-2018 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 AM378_02895 fd54987a4aef93e4cad9bcc182a1e79e 245 Gene3D G3DSA:3.20.20.70 1 245 3.3E-95 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM378_02895 fd54987a4aef93e4cad9bcc182a1e79e 245 Pfam PF00977 Histidine biosynthesis protein 1 233 1.9E-77 T 15-10-2018 IPR006062 Histidine biosynthesis GO:0000105 AM378_02895 fd54987a4aef93e4cad9bcc182a1e79e 245 SUPERFAMILY SSF51366 1 242 7.4E-66 T 15-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 AM378_02895 fd54987a4aef93e4cad9bcc182a1e79e 245 TIGRFAM TIGR00007 TIGR00007: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase 2 238 1.8E-78 T 15-10-2018 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 AM378_18245 4be35f4a95f7db9e6cdfdb004a9a7b90 1831 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 172 188 - T 15-10-2018 IPR018201 Beta-ketoacyl synthase, active site AM378_18245 4be35f4a95f7db9e6cdfdb004a9a7b90 1831 SUPERFAMILY SSF51735 1158 1388 1.22E-26 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily AM378_18245 4be35f4a95f7db9e6cdfdb004a9a7b90 1831 Gene3D G3DSA:3.30.70.250 659 720 2.1E-148 T 15-10-2018 AM378_18245 4be35f4a95f7db9e6cdfdb004a9a7b90 1831 SMART SM00825 Beta-ketoacyl synthase 12 438 5.2E-156 T 15-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain AM378_18245 4be35f4a95f7db9e6cdfdb004a9a7b90 1831 SUPERFAMILY SSF51735 908 1135 3.94E-17 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily AM378_18245 4be35f4a95f7db9e6cdfdb004a9a7b90 1831 Gene3D G3DSA:3.10.129.110 1389 1669 1.0E-30 T 15-10-2018 AM378_18245 4be35f4a95f7db9e6cdfdb004a9a7b90 1831 Pfam PF08659 KR domain 1159 1351 1.6E-43 T 15-10-2018 IPR013968 Polyketide synthase, ketoreductase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 AM378_18245 4be35f4a95f7db9e6cdfdb004a9a7b90 1831 Pfam PF16197 Ketoacyl-synthetase C-terminal extension 388 492 3.0E-12 T 15-10-2018 IPR032821 Ketoacyl-synthetase, C-terminal extension Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 AM378_18245 4be35f4a95f7db9e6cdfdb004a9a7b90 1831 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 532 831 4.6E-111 T 15-10-2018 IPR020801 Polyketide synthase, acyl transferase domain AM378_18245 4be35f4a95f7db9e6cdfdb004a9a7b90 1831 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 10 259 1.6E-67 T 15-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal AM378_18245 4be35f4a95f7db9e6cdfdb004a9a7b90 1831 ProSitePatterns PS00012 Phosphopantetheine attachment site. 1779 1794 - T 15-10-2018 IPR006162 Phosphopantetheine attachment site AM378_18245 4be35f4a95f7db9e6cdfdb004a9a7b90 1831 SUPERFAMILY SSF55048 658 720 2.09E-9 T 15-10-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding AM378_18245 4be35f4a95f7db9e6cdfdb004a9a7b90 1831 Pfam PF14765 Polyketide synthase dehydratase 1386 1658 5.3E-26 T 15-10-2018 IPR020807 Polyketide synthase, dehydratase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 AM378_18245 4be35f4a95f7db9e6cdfdb004a9a7b90 1831 Gene3D G3DSA:3.40.366.10 528 832 2.1E-148 T 15-10-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 AM378_18245 4be35f4a95f7db9e6cdfdb004a9a7b90 1831 SUPERFAMILY SSF53901 6 435 1.38E-78 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 AM378_18245 4be35f4a95f7db9e6cdfdb004a9a7b90 1831 SUPERFAMILY SSF52151 529 820 2.38E-72 T 15-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase AM378_18245 4be35f4a95f7db9e6cdfdb004a9a7b90 1831 Gene3D G3DSA:3.30.70.3290 451 863 2.1E-148 T 15-10-2018 AM378_18245 4be35f4a95f7db9e6cdfdb004a9a7b90 1831 Gene3D G3DSA:1.10.1200.10 1743 1824 6.1E-19 T 15-10-2018 IPR036736 ACP-like superfamily AM378_18245 4be35f4a95f7db9e6cdfdb004a9a7b90 1831 Gene3D G3DSA:3.40.47.10 6 437 1.2E-147 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 AM378_18245 4be35f4a95f7db9e6cdfdb004a9a7b90 1831 Pfam PF00550 Phosphopantetheine attachment site 1757 1820 6.4E-11 T 15-10-2018 IPR009081 Phosphopantetheine binding ACP domain AM378_18245 4be35f4a95f7db9e6cdfdb004a9a7b90 1831 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 1159 1353 9.3E-45 T 15-10-2018 AM378_18245 4be35f4a95f7db9e6cdfdb004a9a7b90 1831 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 267 385 1.8E-35 T 15-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal AM378_18245 4be35f4a95f7db9e6cdfdb004a9a7b90 1831 Pfam PF00698 Acyl transferase domain 530 828 1.3E-54 T 15-10-2018 IPR014043 Acyl transferase AM378_18245 4be35f4a95f7db9e6cdfdb004a9a7b90 1831 SUPERFAMILY SSF47336 1747 1820 1.31E-15 T 15-10-2018 IPR036736 ACP-like superfamily AM378_18245 4be35f4a95f7db9e6cdfdb004a9a7b90 1831 Gene3D G3DSA:3.40.50.720 903 1377 9.8E-83 T 15-10-2018 AM378_19825 4476c108d4fe6a430f5ba274c121dc13 154 SUPERFAMILY SSF46785 13 149 2.65E-34 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM378_19825 4476c108d4fe6a430f5ba274c121dc13 154 PRINTS PR00598 Bacterial regulatory protein MarR family signature 98 114 2.2E-5 T 15-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AM378_19825 4476c108d4fe6a430f5ba274c121dc13 154 PRINTS PR00598 Bacterial regulatory protein MarR family signature 79 94 2.2E-5 T 15-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AM378_19825 4476c108d4fe6a430f5ba274c121dc13 154 PRINTS PR00598 Bacterial regulatory protein MarR family signature 62 78 2.2E-5 T 15-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AM378_19825 4476c108d4fe6a430f5ba274c121dc13 154 Gene3D G3DSA:1.10.10.10 10 150 3.6E-36 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_19825 4476c108d4fe6a430f5ba274c121dc13 154 Pfam PF01047 MarR family 45 103 9.7E-16 T 15-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AM378_19825 4476c108d4fe6a430f5ba274c121dc13 154 SMART SM00347 38 141 9.4E-21 T 15-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AM378_07115 aae903e801ae4f55f71fee5a7c4370d3 117 Pfam PF07377 Protein of unknown function (DUF1493) 1 108 1.5E-28 T 15-10-2018 IPR010862 Protein of unknown function DUF1493 AM378_15315 78dc15acf1acd00f730844dd84a3d2e2 306 Pfam PF00491 Arginase family 34 296 2.1E-85 T 15-10-2018 IPR006035 Ureohydrolase GO:0046872 AM378_15315 78dc15acf1acd00f730844dd84a3d2e2 306 ProSitePatterns PS01053 Arginase family signature. 228 249 - T 15-10-2018 IPR020855 Ureohydrolase, manganese-binding site GO:0016813|GO:0046872 AM378_15315 78dc15acf1acd00f730844dd84a3d2e2 306 Gene3D G3DSA:3.40.800.10 2 306 3.5E-100 T 15-10-2018 AM378_15315 78dc15acf1acd00f730844dd84a3d2e2 306 Hamap MF_01418 Agmatinase [speB]. 1 304 67.667 T 15-10-2018 IPR023694 Agmatinase GO:0008783|GO:0009446|GO:0030145 KEGG: 00330+3.5.3.11|MetaCyc: PWY-40|MetaCyc: PWY-6305 AM378_15315 78dc15acf1acd00f730844dd84a3d2e2 306 PIRSF PIRSF036979 15 304 1.3E-98 T 15-10-2018 IPR006035 Ureohydrolase GO:0046872 AM378_15315 78dc15acf1acd00f730844dd84a3d2e2 306 TIGRFAM TIGR01230 agmatinase: agmatinase 23 298 6.0E-108 T 15-10-2018 IPR005925 Agmatinase-related KEGG: 00330+3.5.3.11|MetaCyc: PWY-40|MetaCyc: PWY-6305|Reactome: R-HSA-351143 AM378_15315 78dc15acf1acd00f730844dd84a3d2e2 306 SUPERFAMILY SSF52768 14 301 6.3E-91 T 15-10-2018 IPR023696 Ureohydrolase domain superfamily AM378_10640 b7ccff14483f1c1a01e1030253dc73e7 324 Gene3D G3DSA:1.10.10.60 211 320 1.4E-25 T 15-10-2018 AM378_10640 b7ccff14483f1c1a01e1030253dc73e7 324 Pfam PF01965 DJ-1/PfpI family 38 176 2.7E-19 T 15-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 AM378_10640 b7ccff14483f1c1a01e1030253dc73e7 324 Gene3D G3DSA:3.40.50.880 1 204 9.1E-55 T 15-10-2018 IPR029062 Class I glutamine amidotransferase-like AM378_10640 b7ccff14483f1c1a01e1030253dc73e7 324 SUPERFAMILY SSF46689 217 265 6.72E-10 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AM378_10640 b7ccff14483f1c1a01e1030253dc73e7 324 SUPERFAMILY SSF52317 1 197 9.47E-43 T 15-10-2018 IPR029062 Class I glutamine amidotransferase-like AM378_10640 b7ccff14483f1c1a01e1030253dc73e7 324 SUPERFAMILY SSF46689 269 319 2.42E-9 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AM378_10640 b7ccff14483f1c1a01e1030253dc73e7 324 Pfam PF12833 Helix-turn-helix domain 238 317 5.3E-20 T 15-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM378_10640 b7ccff14483f1c1a01e1030253dc73e7 324 SMART SM00342 232 315 2.1E-23 T 15-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM378_10640 b7ccff14483f1c1a01e1030253dc73e7 324 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 269 311 - T 15-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AM378_03620 8e58f8eb588d3bface74be75d6fae5cd 264 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 80 247 7.0E-28 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AM378_03620 8e58f8eb588d3bface74be75d6fae5cd 264 Gene3D G3DSA:1.10.3720.10 55 248 1.2E-29 T 15-10-2018 IPR035906 MetI-like superfamily AM378_03620 8e58f8eb588d3bface74be75d6fae5cd 264 SUPERFAMILY SSF161098 56 237 2.88E-37 T 15-10-2018 IPR035906 MetI-like superfamily AM378_04790 286cc45e232b1038ecdbce11362f383f 363 PIRSF PIRSF006641 1 363 3.3E-158 T 15-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 AM378_04790 286cc45e232b1038ecdbce11362f383f 363 SUPERFAMILY SSF81271 279 359 5.01E-36 T 15-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 AM378_04790 286cc45e232b1038ecdbce11362f383f 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 26 44 2.3E-34 T 15-10-2018 IPR006073 GTP binding domain GO:0005525 AM378_04790 286cc45e232b1038ecdbce11362f383f 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 87 105 2.3E-34 T 15-10-2018 IPR006073 GTP binding domain GO:0005525 AM378_04790 286cc45e232b1038ecdbce11362f383f 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 2.3E-34 T 15-10-2018 IPR006073 GTP binding domain GO:0005525 AM378_04790 286cc45e232b1038ecdbce11362f383f 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 70 85 2.3E-34 T 15-10-2018 IPR006073 GTP binding domain GO:0005525 AM378_04790 286cc45e232b1038ecdbce11362f383f 363 TIGRFAM TIGR00092 TIGR00092: GTP-binding protein YchF 1 363 5.0E-176 T 15-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 AM378_04790 286cc45e232b1038ecdbce11362f383f 363 Gene3D G3DSA:1.10.150.300 120 200 4.2E-153 T 15-10-2018 IPR023192 TGS-like domain superfamily Reactome: R-HSA-114608 AM378_04790 286cc45e232b1038ecdbce11362f383f 363 Gene3D G3DSA:3.40.50.300 4 278 4.2E-153 T 15-10-2018 AM378_04790 286cc45e232b1038ecdbce11362f383f 363 SUPERFAMILY SSF52540 3 301 4.15E-85 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_04790 286cc45e232b1038ecdbce11362f383f 363 Pfam PF06071 Protein of unknown function (DUF933) 279 362 1.5E-39 T 15-10-2018 IPR013029 YchF, C-terminal domain Reactome: R-HSA-114608 AM378_04790 286cc45e232b1038ecdbce11362f383f 363 Pfam PF01926 50S ribosome-binding GTPase 5 121 1.0E-21 T 15-10-2018 IPR006073 GTP binding domain GO:0005525 AM378_04790 286cc45e232b1038ecdbce11362f383f 363 Hamap MF_00944 Ribosome-binding ATPase YchF [ychF]. 2 363 46.621 T 15-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 AM378_04790 286cc45e232b1038ecdbce11362f383f 363 Gene3D G3DSA:3.10.20.30 48 362 4.2E-153 T 15-10-2018 IPR012675 Beta-grasp domain superfamily AM378_22545 2e2ad18124fe710e30ab0bcd2159bb5f 938 TIGRFAM TIGR00392 ileS: isoleucine--tRNA ligase 15 843 1.2E-296 T 15-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 AM378_22545 2e2ad18124fe710e30ab0bcd2159bb5f 938 Gene3D G3DSA:3.40.50.620 25 629 4.9E-231 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM378_22545 2e2ad18124fe710e30ab0bcd2159bb5f 938 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 238 261 2.8E-33 T 15-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 AM378_22545 2e2ad18124fe710e30ab0bcd2159bb5f 938 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 401 416 2.8E-33 T 15-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 AM378_22545 2e2ad18124fe710e30ab0bcd2159bb5f 938 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 526 539 2.8E-33 T 15-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 AM378_22545 2e2ad18124fe710e30ab0bcd2159bb5f 938 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 51 62 2.8E-33 T 15-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 AM378_22545 2e2ad18124fe710e30ab0bcd2159bb5f 938 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 561 570 2.8E-33 T 15-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 AM378_22545 2e2ad18124fe710e30ab0bcd2159bb5f 938 Pfam PF06827 Zinc finger found in FPG and IleRS 898 926 1.7E-9 T 15-10-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 AM378_22545 2e2ad18124fe710e30ab0bcd2159bb5f 938 SUPERFAMILY SSF47323 652 929 5.05E-77 T 15-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM378_22545 2e2ad18124fe710e30ab0bcd2159bb5f 938 Gene3D G3DSA:3.90.740.10 195 408 4.9E-231 T 15-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 AM378_22545 2e2ad18124fe710e30ab0bcd2159bb5f 938 SUPERFAMILY SSF50677 204 403 4.6E-54 T 15-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 AM378_22545 2e2ad18124fe710e30ab0bcd2159bb5f 938 Gene3D G3DSA:1.10.730.20 640 930 6.0E-92 T 15-10-2018 AM378_22545 2e2ad18124fe710e30ab0bcd2159bb5f 938 Pfam PF08264 Anticodon-binding domain of tRNA 685 840 3.2E-28 T 15-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 AM378_22545 2e2ad18124fe710e30ab0bcd2159bb5f 938 SUPERFAMILY SSF52374 3 647 6.57E-138 T 15-10-2018 AM378_22545 2e2ad18124fe710e30ab0bcd2159bb5f 938 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 28 640 2.8E-224 T 15-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM378_22545 2e2ad18124fe710e30ab0bcd2159bb5f 938 Hamap MF_02002 Isoleucine--tRNA ligase [ileS]. 2 929 21.374 T 15-10-2018 IPR023585 Isoleucine-tRNA ligase, type 1 GO:0004822 KEGG: 00970+6.1.1.5|Reactome: R-HSA-379726 AM378_22545 2e2ad18124fe710e30ab0bcd2159bb5f 938 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 58 69 - T 15-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM378_17735 e083ab7c6593f141802f9d0f559db4b4 561 Gene3D G3DSA:3.30.565.10 423 558 1.6E-11 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AM378_17735 e083ab7c6593f141802f9d0f559db4b4 561 Pfam PF06580 Histidine kinase 371 448 1.7E-24 T 15-10-2018 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 AM378_17735 e083ab7c6593f141802f9d0f559db4b4 561 SUPERFAMILY SSF55874 424 556 1.64E-11 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AM378_17735 e083ab7c6593f141802f9d0f559db4b4 561 SMART SM00065 218 365 0.0048 T 15-10-2018 IPR003018 GAF domain GO:0005515 AM378_17735 e083ab7c6593f141802f9d0f559db4b4 561 SUPERFAMILY SSF55781 234 355 4.61E-6 T 15-10-2018 AM378_17735 e083ab7c6593f141802f9d0f559db4b4 561 Pfam PF07694 5TMR of 5TMR-LYT 28 196 1.1E-55 T 15-10-2018 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region GO:0000155|GO:0000160|GO:0004673|GO:0016021|GO:0071555 AM378_14370 a4fffb62d475b0633444f85a7e738ba6 412 ProSitePatterns PS00217 Sugar transport proteins signature 2. 112 137 - T 15-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AM378_14370 a4fffb62d475b0633444f85a7e738ba6 412 SUPERFAMILY SSF103473 11 403 9.81E-82 T 15-10-2018 IPR036259 MFS transporter superfamily AM378_14370 a4fffb62d475b0633444f85a7e738ba6 412 Pfam PF07690 Major Facilitator Superfamily 23 306 1.7E-44 T 15-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM378_14370 a4fffb62d475b0633444f85a7e738ba6 412 Gene3D G3DSA:1.20.1250.20 15 212 7.3E-38 T 15-10-2018 AM378_14370 a4fffb62d475b0633444f85a7e738ba6 412 Gene3D G3DSA:1.20.1250.20 213 404 2.9E-31 T 15-10-2018 AM378_14975 38b9bbd12956b24ebcc16c501b9ab05a 448 Gene3D G3DSA:3.90.1300.10 4 446 1.3E-121 T 15-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 AM378_14975 38b9bbd12956b24ebcc16c501b9ab05a 448 Pfam PF01425 Amidase 37 435 9.7E-84 T 15-10-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 AM378_14975 38b9bbd12956b24ebcc16c501b9ab05a 448 SUPERFAMILY SSF75304 4 445 1.96E-113 T 15-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 AM378_14975 38b9bbd12956b24ebcc16c501b9ab05a 448 ProSitePatterns PS00571 Amidases signature. 154 185 - T 15-10-2018 IPR020556 Amidase, conserved site KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921|Reactome: R-HSA-2142753 AM378_10800 6c72151fafc0c36ca5ca507aa4656464 230 Gene3D G3DSA:3.90.470.20 44 147 9.3E-8 T 15-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 AM378_10800 6c72151fafc0c36ca5ca507aa4656464 230 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 115 194 7.5E-11 T 15-10-2018 IPR008278 4'-phosphopantetheinyl transferase domain GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 AM378_10800 6c72151fafc0c36ca5ca507aa4656464 230 PRINTS PR01399 Enterobactin synthetase component D signature 51 71 2.7E-16 T 15-10-2018 IPR003542 Enterobactin synthetase-like, component D GO:0009239|GO:0009366|GO:0016780 AM378_10800 6c72151fafc0c36ca5ca507aa4656464 230 PRINTS PR01399 Enterobactin synthetase component D signature 81 99 2.7E-16 T 15-10-2018 IPR003542 Enterobactin synthetase-like, component D GO:0009239|GO:0009366|GO:0016780 AM378_10800 6c72151fafc0c36ca5ca507aa4656464 230 PRINTS PR01399 Enterobactin synthetase component D signature 158 174 2.7E-16 T 15-10-2018 IPR003542 Enterobactin synthetase-like, component D GO:0009239|GO:0009366|GO:0016780 AM378_10800 6c72151fafc0c36ca5ca507aa4656464 230 SUPERFAMILY SSF56214 115 197 2.62E-14 T 15-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 AM378_21045 374857c59a655504c6c716d8f631fec3 426 SUPERFAMILY SSF54980 366 422 5.75E-13 T 15-10-2018 IPR035647 EF-G domain III/V-like AM378_21045 374857c59a655504c6c716d8f631fec3 426 SUPERFAMILY SSF52540 197 376 8.34E-41 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_21045 374857c59a655504c6c716d8f631fec3 426 Gene3D G3DSA:3.40.50.11060 18 138 1.7E-37 T 15-10-2018 AM378_21045 374857c59a655504c6c716d8f631fec3 426 Gene3D G3DSA:3.40.50.300 197 365 2.5E-38 T 15-10-2018 AM378_21045 374857c59a655504c6c716d8f631fec3 426 Hamap MF_00900 GTPase HflX [hflX]. 27 390 48.227 T 15-10-2018 IPR016496 GTPase HflX GO:0005525 AM378_21045 374857c59a655504c6c716d8f631fec3 426 PIRSF PIRSF006809 3 420 7.6E-150 T 15-10-2018 IPR016496 GTPase HflX GO:0005525 AM378_21045 374857c59a655504c6c716d8f631fec3 426 Pfam PF13167 GTP-binding GTPase N-terminal 25 112 2.3E-31 T 15-10-2018 IPR025121 GTPase HflX, N-terminal AM378_21045 374857c59a655504c6c716d8f631fec3 426 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 267 285 1.7E-10 T 15-10-2018 IPR006073 GTP binding domain GO:0005525 AM378_21045 374857c59a655504c6c716d8f631fec3 426 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 221 239 1.7E-10 T 15-10-2018 IPR006073 GTP binding domain GO:0005525 AM378_21045 374857c59a655504c6c716d8f631fec3 426 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 200 220 1.7E-10 T 15-10-2018 IPR006073 GTP binding domain GO:0005525 AM378_21045 374857c59a655504c6c716d8f631fec3 426 TIGRFAM TIGR03156 GTP_HflX: GTP-binding protein HflX 10 361 9.2E-155 T 15-10-2018 IPR016496 GTPase HflX GO:0005525 AM378_21045 374857c59a655504c6c716d8f631fec3 426 Pfam PF16360 GTP-binding GTPase Middle Region 114 192 1.2E-28 T 15-10-2018 IPR032305 GTP-binding protein, middle domain AM378_21045 374857c59a655504c6c716d8f631fec3 426 Pfam PF01926 50S ribosome-binding GTPase 200 318 1.4E-20 T 15-10-2018 IPR006073 GTP binding domain GO:0005525 AM378_05875 c1128a627d23e2b36f9a4125ec55761e 287 Gene3D G3DSA:1.10.287.470 77 153 1.6E-39 T 15-10-2018 AM378_05875 c1128a627d23e2b36f9a4125ec55761e 287 Gene3D G3DSA:2.40.30.170 189 236 1.6E-39 T 15-10-2018 AM378_05875 c1128a627d23e2b36f9a4125ec55761e 287 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 43 230 9.2E-16 T 15-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AM378_05875 c1128a627d23e2b36f9a4125ec55761e 287 SUPERFAMILY SSF111369 42 219 3.53E-26 T 15-10-2018 AM378_05875 c1128a627d23e2b36f9a4125ec55761e 287 Gene3D G3DSA:2.40.50.100 43 188 1.6E-39 T 15-10-2018 AM378_05875 c1128a627d23e2b36f9a4125ec55761e 287 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 44 230 4.5E-38 T 15-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AM378_23535 f76409d81fe8e669220f009ff05d2133 818 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 360 503 2.1E-13 T 15-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AM378_23535 f76409d81fe8e669220f009ff05d2133 818 Gene3D G3DSA:1.10.540.10 121 235 7.1E-101 T 15-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 AM378_23535 f76409d81fe8e669220f009ff05d2133 818 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 146 233 2.4E-17 T 15-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AM378_23535 f76409d81fe8e669220f009ff05d2133 818 Pfam PF09317 Domain of unknown function (DUF1974) 514 792 6.6E-119 T 15-10-2018 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type GO:0003995|GO:0033539|GO:0055114 KEGG: 00071+1.3.8.8+1.3.8.7|KEGG: 00280+1.3.8.7|KEGG: 00410+1.3.8.7|KEGG: 00640+1.3.8.7|MetaCyc: PWY-7094|MetaCyc: PWY-7654 AM378_23535 f76409d81fe8e669220f009ff05d2133 818 Gene3D G3DSA:1.20.140.10 360 506 7.1E-101 T 15-10-2018 AM378_23535 f76409d81fe8e669220f009ff05d2133 818 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 237 327 2.3E-8 T 15-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 AM378_23535 f76409d81fe8e669220f009ff05d2133 818 SUPERFAMILY SSF56645 120 355 2.62E-46 T 15-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 AM378_23535 f76409d81fe8e669220f009ff05d2133 818 SUPERFAMILY SSF47203 360 515 1.93E-22 T 15-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 AM378_23535 f76409d81fe8e669220f009ff05d2133 818 Gene3D G3DSA:2.40.110.10 236 359 7.1E-101 T 15-10-2018 AM378_15480 38e94da4f034354be199e61d9f49a704 120 Pfam PF06062 Uncharacterised protein family (UPF0231) 1 117 2.8E-44 T 15-10-2018 IPR008249 Uncharacterised protein family UPF0231 AM378_15480 38e94da4f034354be199e61d9f49a704 120 Hamap MF_01053 UPF0231 protein YacL [yacL]. 1 119 29.706 T 15-10-2018 IPR008249 Uncharacterised protein family UPF0231 AM378_15480 38e94da4f034354be199e61d9f49a704 120 PIRSF PIRSF006287 1 120 1.1E-48 T 15-10-2018 IPR008249 Uncharacterised protein family UPF0231 AM378_15480 38e94da4f034354be199e61d9f49a704 120 ProDom PD020773 UPF0231 YACL UNCHARACTERISED UCP006287 VC0605 UNCHARACTERIZED 3'REGION VV2750 BCR OXIDASE 1 117 4.0E-49 T 15-10-2018 IPR008249 Uncharacterised protein family UPF0231 AM378_04010 4896f098f206d4bf9047d7b3ab80d3e2 422 Gene3D G3DSA:3.50.50.60 112 244 8.6E-42 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AM378_04010 4896f098f206d4bf9047d7b3ab80d3e2 422 SUPERFAMILY SSF51905 2 306 1.04E-35 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AM378_04010 4896f098f206d4bf9047d7b3ab80d3e2 422 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 101 109 1.6E-10 T 15-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AM378_04010 4896f098f206d4bf9047d7b3ab80d3e2 422 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 7 29 1.6E-10 T 15-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AM378_04010 4896f098f206d4bf9047d7b3ab80d3e2 422 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 140 164 1.6E-10 T 15-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AM378_04010 4896f098f206d4bf9047d7b3ab80d3e2 422 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 272 290 1.6E-10 T 15-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AM378_04010 4896f098f206d4bf9047d7b3ab80d3e2 422 Gene3D G3DSA:3.50.50.60 7 289 8.6E-42 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AM378_04010 4896f098f206d4bf9047d7b3ab80d3e2 422 PIRSF PIRSF037495 1 418 1.3E-107 T 15-10-2018 IPR017224 Opine oxidase, subunit A/hydrogen cyanide synthase, subunit B GO:0016491|GO:0055114 AM378_04010 4896f098f206d4bf9047d7b3ab80d3e2 422 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 7 288 1.1E-23 T 15-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM378_04010 4896f098f206d4bf9047d7b3ab80d3e2 422 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 262 284 1.3E-16 T 15-10-2018 AM378_04010 4896f098f206d4bf9047d7b3ab80d3e2 422 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 144 162 1.3E-16 T 15-10-2018 AM378_04010 4896f098f206d4bf9047d7b3ab80d3e2 422 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 100 118 1.3E-16 T 15-10-2018 AM378_04010 4896f098f206d4bf9047d7b3ab80d3e2 422 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 1.3E-16 T 15-10-2018 AM378_04010 4896f098f206d4bf9047d7b3ab80d3e2 422 Gene3D G3DSA:1.10.10.1100 334 392 3.8E-9 T 15-10-2018 AM378_21615 0670cd55aad78ff5c63adf4d16cad244 154 SUPERFAMILY SSF54893 2 100 5.23E-35 T 15-10-2018 IPR036793 Aspartate carbamoyltransferase regulatory subunit, N-terminal domain superfamily AM378_21615 0670cd55aad78ff5c63adf4d16cad244 154 Pfam PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain 7 97 1.7E-29 T 15-10-2018 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal AM378_21615 0670cd55aad78ff5c63adf4d16cad244 154 TIGRFAM TIGR00240 ATCase_reg: aspartate carbamoyltransferase, regulatory subunit 5 151 3.5E-64 T 15-10-2018 IPR002801 Aspartate transcarbamylase regulatory subunit GO:0006207|GO:0009347 AM378_21615 0670cd55aad78ff5c63adf4d16cad244 154 Gene3D G3DSA:3.30.70.140 1 100 1.3E-36 T 15-10-2018 IPR036793 Aspartate carbamoyltransferase regulatory subunit, N-terminal domain superfamily AM378_21615 0670cd55aad78ff5c63adf4d16cad244 154 Hamap MF_00002 Aspartate carbamoyltransferase regulatory chain [pyrI]. 4 152 32.569 T 15-10-2018 IPR002801 Aspartate transcarbamylase regulatory subunit GO:0006207|GO:0009347 AM378_21615 0670cd55aad78ff5c63adf4d16cad244 154 Pfam PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain 103 149 2.4E-18 T 15-10-2018 IPR020542 Aspartate carbamoyltransferase regulatory subunit, C-terminal AM378_21615 0670cd55aad78ff5c63adf4d16cad244 154 Gene3D G3DSA:2.30.30.20 101 153 1.2E-24 T 15-10-2018 AM378_21615 0670cd55aad78ff5c63adf4d16cad244 154 ProDom PD006194 REGULATORY ASPARTATE CARBAMOYLTRANSFERASE CHAIN METAL-BINDING ZINC PYRIMIDINE BIOSYNTHESIS SUBUNIT TRANSFERASE 9 99 9.0E-40 T 15-10-2018 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal AM378_21615 0670cd55aad78ff5c63adf4d16cad244 154 SUPERFAMILY SSF57825 101 151 3.92E-15 T 15-10-2018 IPR036792 Aspartate carbamoyltransferase regulatory subunit, C-terminal domain superfamily AM378_17790 b0307d7c25f50102cd8ecfc1eb2e8774 467 Gene3D G3DSA:3.30.950.10 332 463 3.1E-44 T 15-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 AM378_17790 b0307d7c25f50102cd8ecfc1eb2e8774 467 Hamap MF_01646 Siroheme synthase [cysG]. 1 457 51.061 T 15-10-2018 IPR012409 Sirohaem synthase GO:0004851|GO:0009236|GO:0019354|GO:0043115|GO:0051266|GO:0051287 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 AM378_17790 b0307d7c25f50102cd8ecfc1eb2e8774 467 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 218 426 2.2E-47 T 15-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 AM378_17790 b0307d7c25f50102cd8ecfc1eb2e8774 467 Pfam PF13241 Putative NAD(P)-binding 6 115 1.4E-23 T 15-10-2018 AM378_17790 b0307d7c25f50102cd8ecfc1eb2e8774 467 Pfam PF14824 Sirohaem biosynthesis protein central 121 146 2.1E-8 T 15-10-2018 IPR028281 Siroheme synthase, central domain KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 AM378_17790 b0307d7c25f50102cd8ecfc1eb2e8774 467 Gene3D G3DSA:3.40.1010.10 215 331 4.1E-43 T 15-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 AM378_17790 b0307d7c25f50102cd8ecfc1eb2e8774 467 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 216 448 8.7E-89 T 15-10-2018 IPR006366 Uroporphyrin-III C-methyltransferase GO:0008168|GO:0019354 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 AM378_17790 b0307d7c25f50102cd8ecfc1eb2e8774 467 SUPERFAMILY SSF53790 215 456 9.55E-77 T 15-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 AM378_17790 b0307d7c25f50102cd8ecfc1eb2e8774 467 Gene3D G3DSA:1.10.8.210 149 213 2.6E-24 T 15-10-2018 IPR037115 Sirohaem synthase, dimerisation domain superfamily GO:0006779|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 AM378_17790 b0307d7c25f50102cd8ecfc1eb2e8774 467 Pfam PF10414 Sirohaem synthase dimerisation region 150 208 1.7E-18 T 15-10-2018 IPR019478 Sirohaem synthase, dimerisation domain GO:0006779|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 AM378_17790 b0307d7c25f50102cd8ecfc1eb2e8774 467 PIRSF PIRSF036426 1 464 3.5E-197 T 15-10-2018 IPR012409 Sirohaem synthase GO:0004851|GO:0009236|GO:0019354|GO:0043115|GO:0051266|GO:0051287 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 AM378_17790 b0307d7c25f50102cd8ecfc1eb2e8774 467 Gene3D G3DSA:3.40.50.720 1 112 2.3E-29 T 15-10-2018 AM378_17790 b0307d7c25f50102cd8ecfc1eb2e8774 467 Gene3D G3DSA:3.30.160.110 113 148 5.1E-20 T 15-10-2018 AM378_17790 b0307d7c25f50102cd8ecfc1eb2e8774 467 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 221 235 - T 15-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 AM378_17790 b0307d7c25f50102cd8ecfc1eb2e8774 467 SUPERFAMILY SSF51735 1 112 3.26E-23 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily AM378_17790 b0307d7c25f50102cd8ecfc1eb2e8774 467 SUPERFAMILY SSF75615 114 207 1.03E-26 T 15-10-2018 AM378_17790 b0307d7c25f50102cd8ecfc1eb2e8774 467 TIGRFAM TIGR01470 cysG_Nterm: siroheme synthase, N-terminal domain 4 206 6.4E-68 T 15-10-2018 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 AM378_13350 4d94c4f349459853270c37bd73a3e1c7 141 ProSitePatterns PS00469 Nucleoside diphosphate kinases active site. 114 122 - T 15-10-2018 IPR023005 Nucleoside diphosphate kinase, active site KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AM378_13350 4d94c4f349459853270c37bd73a3e1c7 141 SUPERFAMILY SSF54919 1 139 8.64E-59 T 15-10-2018 IPR036850 Nucleoside diphosphate kinase-like domain superfamily KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AM378_13350 4d94c4f349459853270c37bd73a3e1c7 141 Pfam PF00334 Nucleoside diphosphate kinase 4 138 3.5E-56 T 15-10-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AM378_13350 4d94c4f349459853270c37bd73a3e1c7 141 Hamap MF_00451 Nucleoside diphosphate kinase [ndk]. 3 138 34.984 T 15-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AM378_13350 4d94c4f349459853270c37bd73a3e1c7 141 SMART SM00562 3 140 3.6E-86 T 15-10-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AM378_13350 4d94c4f349459853270c37bd73a3e1c7 141 Gene3D G3DSA:3.30.70.141 1 141 1.4E-58 T 15-10-2018 IPR036850 Nucleoside diphosphate kinase-like domain superfamily KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AM378_13350 4d94c4f349459853270c37bd73a3e1c7 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 6 28 3.9E-38 T 15-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AM378_13350 4d94c4f349459853270c37bd73a3e1c7 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 114 133 3.9E-38 T 15-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AM378_13350 4d94c4f349459853270c37bd73a3e1c7 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 70 87 3.9E-38 T 15-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AM378_13350 4d94c4f349459853270c37bd73a3e1c7 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 91 107 3.9E-38 T 15-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AM378_13350 4d94c4f349459853270c37bd73a3e1c7 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 50 69 3.9E-38 T 15-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AM378_14705 c40a025d150cec2b2bffbf8fc7b614f4 417 Gene3D G3DSA:3.40.47.10 1 259 3.1E-48 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 AM378_14705 c40a025d150cec2b2bffbf8fc7b614f4 417 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 258 372 2.2E-32 T 15-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal AM378_14705 c40a025d150cec2b2bffbf8fc7b614f4 417 SUPERFAMILY SSF53901 5 257 3.84E-41 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 AM378_14705 c40a025d150cec2b2bffbf8fc7b614f4 417 Gene3D G3DSA:3.40.47.10 262 416 1.4E-44 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 AM378_14705 c40a025d150cec2b2bffbf8fc7b614f4 417 SMART SM00825 Beta-ketoacyl synthase 7 417 5.1E-9 T 15-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain AM378_14705 c40a025d150cec2b2bffbf8fc7b614f4 417 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 158 174 - T 15-10-2018 IPR018201 Beta-ketoacyl synthase, active site AM378_14705 c40a025d150cec2b2bffbf8fc7b614f4 417 SUPERFAMILY SSF53901 220 414 8.24E-62 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 AM378_14705 c40a025d150cec2b2bffbf8fc7b614f4 417 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 5 250 6.5E-31 T 15-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal AM378_09590 f99e3177a0f51e845950da90280178c4 199 Gene3D G3DSA:3.40.50.360 2 199 6.0E-49 T 15-10-2018 IPR029039 Flavoprotein-like superfamily AM378_09590 f99e3177a0f51e845950da90280178c4 199 Hamap MF_01216 FMN-dependent NADH-azoreductase [azoR]. 2 198 26.898 T 15-10-2018 IPR023048 NADH-azoreductase, FMN-dependent GO:0016661|GO:0055114 AM378_09590 f99e3177a0f51e845950da90280178c4 199 SUPERFAMILY SSF52218 1 198 3.88E-47 T 15-10-2018 IPR029039 Flavoprotein-like superfamily AM378_09590 f99e3177a0f51e845950da90280178c4 199 Pfam PF02525 Flavodoxin-like fold 2 196 1.2E-37 T 15-10-2018 IPR003680 Flavodoxin-like fold AM378_16205 eb9a3d0c2bad97a8d936401bf63b82f0 162 Pfam PF05926 Phage head completion protein (GPL) 24 161 3.2E-46 T 15-10-2018 IPR009225 Bacteriophage head completion protein GpL GO:0019069 AM378_23300 a54c8b0315ec71c0d8689cd9a80cfba7 263 Pfam PF01578 Cytochrome C assembly protein 37 260 5.2E-44 T 15-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 AM378_21085 0161a9010ead3f90d7bed48bdc82c9d2 542 Gene3D G3DSA:1.20.140.10 289 444 1.1E-36 T 15-10-2018 AM378_21085 0161a9010ead3f90d7bed48bdc82c9d2 542 Gene3D G3DSA:2.40.110.20 130 288 7.1E-57 T 15-10-2018 AM378_21085 0161a9010ead3f90d7bed48bdc82c9d2 542 SUPERFAMILY SSF47203 287 447 1.61E-39 T 15-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 AM378_21085 0161a9010ead3f90d7bed48bdc82c9d2 542 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 181 279 9.2E-14 T 15-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 AM378_21085 0161a9010ead3f90d7bed48bdc82c9d2 542 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 402 421 - T 15-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 AM378_21085 0161a9010ead3f90d7bed48bdc82c9d2 542 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 289 443 2.2E-29 T 15-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AM378_21085 0161a9010ead3f90d7bed48bdc82c9d2 542 SUPERFAMILY SSF56645 88 296 7.05E-30 T 15-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 AM378_24185 90702eb953cc7fd2f11990e4cc4f8aa0 587 ProSitePatterns PS00462 Gamma-glutamyltranspeptidase signature. 375 399 - T 15-10-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-4061|MetaCyc: PWY-5826|MetaCyc: PWY-6842|MetaCyc: PWY-7112|MetaCyc: PWY-7559 AM378_24185 90702eb953cc7fd2f11990e4cc4f8aa0 587 Gene3D G3DSA:1.10.246.130 262 374 1.3E-41 T 15-10-2018 AM378_24185 90702eb953cc7fd2f11990e4cc4f8aa0 587 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 440 455 4.2E-78 T 15-10-2018 AM378_24185 90702eb953cc7fd2f11990e4cc4f8aa0 587 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 246 262 4.2E-78 T 15-10-2018 AM378_24185 90702eb953cc7fd2f11990e4cc4f8aa0 587 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 276 295 4.2E-78 T 15-10-2018 AM378_24185 90702eb953cc7fd2f11990e4cc4f8aa0 587 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 375 393 4.2E-78 T 15-10-2018 AM378_24185 90702eb953cc7fd2f11990e4cc4f8aa0 587 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 399 417 4.2E-78 T 15-10-2018 AM378_24185 90702eb953cc7fd2f11990e4cc4f8aa0 587 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 464 481 4.2E-78 T 15-10-2018 AM378_24185 90702eb953cc7fd2f11990e4cc4f8aa0 587 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 129 147 4.2E-78 T 15-10-2018 AM378_24185 90702eb953cc7fd2f11990e4cc4f8aa0 587 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 147 166 4.2E-78 T 15-10-2018 AM378_24185 90702eb953cc7fd2f11990e4cc4f8aa0 587 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 56 81 4.2E-78 T 15-10-2018 AM378_24185 90702eb953cc7fd2f11990e4cc4f8aa0 587 TIGRFAM TIGR00066 g_glut_trans: gamma-glutamyltransferase 34 543 5.1E-172 T 15-10-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-4061|MetaCyc: PWY-5826|MetaCyc: PWY-6842|MetaCyc: PWY-7112|MetaCyc: PWY-7559 AM378_24185 90702eb953cc7fd2f11990e4cc4f8aa0 587 Pfam PF01019 Gamma-glutamyltranspeptidase 49 578 3.1E-181 T 15-10-2018 AM378_24185 90702eb953cc7fd2f11990e4cc4f8aa0 587 Gene3D G3DSA:3.60.20.40 375 579 4.0E-68 T 15-10-2018 AM378_24185 90702eb953cc7fd2f11990e4cc4f8aa0 587 SUPERFAMILY SSF56235 26 587 2.51E-185 T 15-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AM378_00935 11226ee229defd4a1b76aabd717fb852 562 Hamap MF_00275 Potassium-transporting ATPase potassium-binding subunit [kdpA]. 2 558 35.352 T 15-10-2018 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 AM378_00935 11226ee229defd4a1b76aabd717fb852 562 PIRSF PIRSF001294 1 560 1.4E-236 T 15-10-2018 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 AM378_00935 11226ee229defd4a1b76aabd717fb852 562 Pfam PF03814 Potassium-transporting ATPase A subunit 12 556 6.0E-240 T 15-10-2018 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 AM378_00935 11226ee229defd4a1b76aabd717fb852 562 TIGRFAM TIGR00680 kdpA: K+-transporting ATPase, A subunit 1 557 5.4E-264 T 15-10-2018 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 AM378_00910 a992fb6fbee8ce207d6594d66bd80337 99 Pfam PF12977 Domain of Unknown Function with PDB structure (DUF3861) 4 95 8.7E-36 T 15-10-2018 IPR024476 Protein of unknown function DUF3861 AM378_00910 a992fb6fbee8ce207d6594d66bd80337 99 Gene3D G3DSA:1.10.225.20 2 96 1.6E-31 T 15-10-2018 AM378_01065 36e3b6fcb60785fe187d30d727ae7996 37 Pfam PF08173 Membrane bound YbgT-like protein 1 27 3.4E-15 T 15-10-2018 IPR012994 Membrane bound YbgT-like AM378_01065 36e3b6fcb60785fe187d30d727ae7996 37 TIGRFAM TIGR02106 cyd_oper_ybgT: cyd operon protein YbgT 1 30 4.1E-20 T 15-10-2018 IPR011724 Cyd operon protein YbgT MetaCyc: PWY-7545 AM378_22990 8703981c2fef22a5174ef0c74d14d4ea 908 SMART SM00448 664 777 1.9E-31 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM378_22990 8703981c2fef22a5174ef0c74d14d4ea 908 Pfam PF01627 Hpt domain 816 894 2.2E-11 T 15-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 AM378_22990 8703981c2fef22a5174ef0c74d14d4ea 908 SUPERFAMILY SSF55874 345 515 1.13E-43 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AM378_22990 8703981c2fef22a5174ef0c74d14d4ea 908 Gene3D G3DSA:1.20.1480.50 164 258 4.1E-8 T 15-10-2018 AM378_22990 8703981c2fef22a5174ef0c74d14d4ea 908 Pfam PF00512 His Kinase A (phospho-acceptor) domain 292 356 6.2E-20 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM378_22990 8703981c2fef22a5174ef0c74d14d4ea 908 Gene3D G3DSA:1.20.120.160 795 905 4.1E-31 T 15-10-2018 IPR036641 HPT domain superfamily GO:0000160 AM378_22990 8703981c2fef22a5174ef0c74d14d4ea 908 SUPERFAMILY SSF47226 760 895 2.09E-22 T 15-10-2018 IPR036641 HPT domain superfamily GO:0000160 AM378_22990 8703981c2fef22a5174ef0c74d14d4ea 908 Gene3D G3DSA:1.10.287.130 277 357 8.9E-27 T 15-10-2018 AM378_22990 8703981c2fef22a5174ef0c74d14d4ea 908 SUPERFAMILY SSF158472 199 248 4.84E-5 T 15-10-2018 AM378_22990 8703981c2fef22a5174ef0c74d14d4ea 908 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 403 517 1.8E-29 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AM378_22990 8703981c2fef22a5174ef0c74d14d4ea 908 SMART SM00304 199 251 1.3E-7 T 15-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AM378_22990 8703981c2fef22a5174ef0c74d14d4ea 908 SMART SM00073 806 901 2.3E-11 T 15-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 AM378_22990 8703981c2fef22a5174ef0c74d14d4ea 908 Gene3D G3DSA:3.40.50.2300 653 787 1.6E-35 T 15-10-2018 AM378_22990 8703981c2fef22a5174ef0c74d14d4ea 908 Pfam PF00072 Response regulator receiver domain 666 775 1.5E-26 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM378_22990 8703981c2fef22a5174ef0c74d14d4ea 908 SMART SM00388 291 356 5.6E-25 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM378_22990 8703981c2fef22a5174ef0c74d14d4ea 908 PRINTS PR00344 Bacterial sensor protein C-terminal signature 444 458 6.7E-13 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM378_22990 8703981c2fef22a5174ef0c74d14d4ea 908 PRINTS PR00344 Bacterial sensor protein C-terminal signature 462 472 6.7E-13 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM378_22990 8703981c2fef22a5174ef0c74d14d4ea 908 PRINTS PR00344 Bacterial sensor protein C-terminal signature 479 497 6.7E-13 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM378_22990 8703981c2fef22a5174ef0c74d14d4ea 908 PRINTS PR00344 Bacterial sensor protein C-terminal signature 503 516 6.7E-13 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM378_22990 8703981c2fef22a5174ef0c74d14d4ea 908 SMART SM00387 403 519 5.9E-34 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AM378_22990 8703981c2fef22a5174ef0c74d14d4ea 908 SUPERFAMILY SSF47384 276 357 1.88E-22 T 15-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AM378_22990 8703981c2fef22a5174ef0c74d14d4ea 908 Pfam PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) 31 176 2.2E-58 T 15-10-2018 IPR019247 Histidine kinase BarA, N-terminal AM378_22990 8703981c2fef22a5174ef0c74d14d4ea 908 SUPERFAMILY SSF52172 663 781 1.85E-33 T 15-10-2018 IPR011006 CheY-like superfamily AM378_22990 8703981c2fef22a5174ef0c74d14d4ea 908 Gene3D G3DSA:3.30.565.10 358 522 3.3E-51 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AM378_08910 2455053a6906736a69ca40bce64bc56b 69 PIRSF PIRSF002599 1 69 6.4E-26 T 15-10-2018 IPR012156 Cold shock, CspA GO:0003676 AM378_08910 2455053a6906736a69ca40bce64bc56b 69 SUPERFAMILY SSF50249 3 68 2.06E-26 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold AM378_08910 2455053a6906736a69ca40bce64bc56b 69 Gene3D G3DSA:2.40.50.140 1 69 1.8E-32 T 15-10-2018 AM378_08910 2455053a6906736a69ca40bce64bc56b 69 Pfam PF00313 'Cold-shock' DNA-binding domain 5 68 1.8E-33 T 15-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AM378_08910 2455053a6906736a69ca40bce64bc56b 69 SMART SM00357 5 69 8.3E-32 T 15-10-2018 IPR011129 Cold shock domain GO:0003676 AM378_08910 2455053a6906736a69ca40bce64bc56b 69 ProSitePatterns PS00352 'Cold-shock' domain signature. 17 36 - T 15-10-2018 IPR019844 Cold-shock conserved site AM378_08910 2455053a6906736a69ca40bce64bc56b 69 PRINTS PR00050 Cold shock protein signature 42 60 1.1E-18 T 15-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AM378_08910 2455053a6906736a69ca40bce64bc56b 69 PRINTS PR00050 Cold shock protein signature 27 36 1.1E-18 T 15-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AM378_08910 2455053a6906736a69ca40bce64bc56b 69 PRINTS PR00050 Cold shock protein signature 6 21 1.1E-18 T 15-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AM378_14325 1689881ccf592b27b41126925e4e0787 264 SUPERFAMILY SSF55920 3 255 2.62E-90 T 15-10-2018 IPR036005 Creatinase/aminopeptidase-like AM378_14325 1689881ccf592b27b41126925e4e0787 264 Gene3D G3DSA:3.90.230.10 2 264 3.5E-117 T 15-10-2018 AM378_14325 1689881ccf592b27b41126925e4e0787 264 Pfam PF00557 Metallopeptidase family M24 13 242 1.1E-51 T 15-10-2018 IPR000994 Peptidase M24 AM378_14325 1689881ccf592b27b41126925e4e0787 264 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 3 250 2.2E-108 T 15-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 AM378_14325 1689881ccf592b27b41126925e4e0787 264 Hamap MF_01974 Methionine aminopeptidase [map]. 3 251 43.337 T 15-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 AM378_14325 1689881ccf592b27b41126925e4e0787 264 PRINTS PR00599 Methionine aminopeptidase-1 signature 162 174 9.6E-23 T 15-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 AM378_14325 1689881ccf592b27b41126925e4e0787 264 PRINTS PR00599 Methionine aminopeptidase-1 signature 193 205 9.6E-23 T 15-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 AM378_14325 1689881ccf592b27b41126925e4e0787 264 PRINTS PR00599 Methionine aminopeptidase-1 signature 92 108 9.6E-23 T 15-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 AM378_14325 1689881ccf592b27b41126925e4e0787 264 PRINTS PR00599 Methionine aminopeptidase-1 signature 69 82 9.6E-23 T 15-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 AM378_14325 1689881ccf592b27b41126925e4e0787 264 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 168 186 - T 15-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 AM378_19930 c90459e9aaffa31eacc4cc7ddcad57ad 867 Pfam PF07238 PilZ domain 692 788 3.7E-11 T 15-10-2018 IPR009875 PilZ domain GO:0035438 AM378_19930 c90459e9aaffa31eacc4cc7ddcad57ad 867 Pfam PF00535 Glycosyl transferase family 2 276 445 4.6E-34 T 15-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 AM378_19930 c90459e9aaffa31eacc4cc7ddcad57ad 867 TIGRFAM TIGR03030 CelA: cellulose synthase catalytic subunit (UDP-forming) 144 827 5.3E-290 T 15-10-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 AM378_19930 c90459e9aaffa31eacc4cc7ddcad57ad 867 Gene3D G3DSA:2.40.10.220 688 797 3.8E-11 T 15-10-2018 AM378_19930 c90459e9aaffa31eacc4cc7ddcad57ad 867 SUPERFAMILY SSF53448 273 548 1.38E-51 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AM378_19930 c90459e9aaffa31eacc4cc7ddcad57ad 867 SUPERFAMILY SSF141371 694 781 1.24E-7 T 15-10-2018 AM378_19930 c90459e9aaffa31eacc4cc7ddcad57ad 867 Pfam PF03552 Cellulose synthase 449 569 2.0E-11 T 15-10-2018 IPR005150 Cellulose synthase GO:0016020|GO:0016760|GO:0030244 AM378_19930 c90459e9aaffa31eacc4cc7ddcad57ad 867 Gene3D G3DSA:3.90.550.10 260 481 6.0E-79 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AM378_19930 c90459e9aaffa31eacc4cc7ddcad57ad 867 PRINTS PR01439 Cellulose synthase subunit A signature 225 250 2.7E-58 T 15-10-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 AM378_19930 c90459e9aaffa31eacc4cc7ddcad57ad 867 PRINTS PR01439 Cellulose synthase subunit A signature 280 299 2.7E-58 T 15-10-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 AM378_19930 c90459e9aaffa31eacc4cc7ddcad57ad 867 PRINTS PR01439 Cellulose synthase subunit A signature 522 548 2.7E-58 T 15-10-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 AM378_19930 c90459e9aaffa31eacc4cc7ddcad57ad 867 PRINTS PR01439 Cellulose synthase subunit A signature 551 570 2.7E-58 T 15-10-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 AM378_19930 c90459e9aaffa31eacc4cc7ddcad57ad 867 PRINTS PR01439 Cellulose synthase subunit A signature 591 610 2.7E-58 T 15-10-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 AM378_19930 c90459e9aaffa31eacc4cc7ddcad57ad 867 PRINTS PR01439 Cellulose synthase subunit A signature 361 385 2.7E-58 T 15-10-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 AM378_19930 c90459e9aaffa31eacc4cc7ddcad57ad 867 PRINTS PR01439 Cellulose synthase subunit A signature 197 217 2.7E-58 T 15-10-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 AM378_19930 c90459e9aaffa31eacc4cc7ddcad57ad 867 PRINTS PR01439 Cellulose synthase subunit A signature 665 686 2.7E-58 T 15-10-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 AM378_15185 29ec241d109011554c8ec881dac7bbfc 359 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 14 357 2.4E-115 T 15-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 AM378_15185 29ec241d109011554c8ec881dac7bbfc 359 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2. 172 183 - T 15-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 AM378_15185 29ec241d109011554c8ec881dac7bbfc 359 Gene3D G3DSA:3.20.20.70 2 359 7.9E-154 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM378_15185 29ec241d109011554c8ec881dac7bbfc 359 ProSitePatterns PS00602 Fructose-bisphosphate aldolase class-II signature 1. 101 112 - T 15-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 AM378_15185 29ec241d109011554c8ec881dac7bbfc 359 SUPERFAMILY SSF51569 4 357 2.75E-132 T 15-10-2018 AM378_15185 29ec241d109011554c8ec881dac7bbfc 359 Pfam PF01116 Fructose-bisphosphate aldolase class-II 17 355 2.3E-90 T 15-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 AM378_15185 29ec241d109011554c8ec881dac7bbfc 359 PIRSF PIRSF001359 13 359 1.8E-102 T 15-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 AM378_15185 29ec241d109011554c8ec881dac7bbfc 359 TIGRFAM TIGR01520 FruBisAldo_II_A: fructose-bisphosphate aldolase, class II 4 358 1.1E-188 T 15-10-2018 IPR006411 Fructose-bisphosphate aldolase, class II, yeast/E. coli subtype GO:0004332|GO:0006096 KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385 AM378_22540 d899e3b19b6a8e96d640f64a764b307e 312 SUPERFAMILY SSF52374 15 175 2.39E-37 T 15-10-2018 AM378_22540 d899e3b19b6a8e96d640f64a764b307e 312 Pfam PF01687 Riboflavin kinase 184 306 1.9E-38 T 15-10-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|MetaCyc: PWY-7863|Reactome: R-HSA-196843 AM378_22540 d899e3b19b6a8e96d640f64a764b307e 312 Gene3D G3DSA:2.40.30.30 188 310 5.4E-39 T 15-10-2018 IPR023465 Riboflavin kinase domain superfamily GO:0008531|GO:0009231 Reactome: R-HSA-196843 AM378_22540 d899e3b19b6a8e96d640f64a764b307e 312 SMART SM00904 183 307 2.0E-63 T 15-10-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|MetaCyc: PWY-7863|Reactome: R-HSA-196843 AM378_22540 d899e3b19b6a8e96d640f64a764b307e 312 PIRSF PIRSF004491 1 311 1.1E-104 T 15-10-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 AM378_22540 d899e3b19b6a8e96d640f64a764b307e 312 SUPERFAMILY SSF82114 174 307 6.76E-45 T 15-10-2018 IPR023465 Riboflavin kinase domain superfamily GO:0008531|GO:0009231 Reactome: R-HSA-196843 AM378_22540 d899e3b19b6a8e96d640f64a764b307e 312 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 18 51 6.8E-8 T 15-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 AM378_22540 d899e3b19b6a8e96d640f64a764b307e 312 Pfam PF06574 FAD synthetase 12 167 1.1E-57 T 15-10-2018 IPR015864 FAD synthetase GO:0003919|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 AM378_22540 d899e3b19b6a8e96d640f64a764b307e 312 Gene3D G3DSA:3.40.50.620 1 186 1.6E-60 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM378_22540 d899e3b19b6a8e96d640f64a764b307e 312 TIGRFAM TIGR00083 ribF: riboflavin biosynthesis protein RibF 18 306 3.3E-114 T 15-10-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 AM378_20010 c43256382737a11f4800b024a9b1e110 420 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 324 419 4.0E-20 T 15-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 AM378_20010 c43256382737a11f4800b024a9b1e110 420 Gene3D G3DSA:3.40.50.720 205 420 7.3E-59 T 15-10-2018 AM378_20010 c43256382737a11f4800b024a9b1e110 420 SUPERFAMILY SSF52413 311 419 3.27E-25 T 15-10-2018 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily Reactome: R-HSA-173599 AM378_20010 c43256382737a11f4800b024a9b1e110 420 PIRSF PIRSF000124 4 418 1.6E-74 T 15-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 AM378_20010 c43256382737a11f4800b024a9b1e110 420 SUPERFAMILY SSF48179 206 298 1.68E-27 T 15-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 AM378_20010 c43256382737a11f4800b024a9b1e110 420 SUPERFAMILY SSF51735 5 198 1.38E-45 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily AM378_20010 c43256382737a11f4800b024a9b1e110 420 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 206 293 3.6E-26 T 15-10-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 AM378_20010 c43256382737a11f4800b024a9b1e110 420 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 5 187 1.4E-58 T 15-10-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 AM378_20010 c43256382737a11f4800b024a9b1e110 420 PIRSF PIRSF500136 1 420 5.7E-148 T 15-10-2018 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase GO:0000271|GO:0016628|GO:0055114 AM378_20010 c43256382737a11f4800b024a9b1e110 420 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 5 416 2.2E-119 T 15-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 AM378_20010 c43256382737a11f4800b024a9b1e110 420 SMART SM00984 324 420 4.7E-26 T 15-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 AM378_20010 c43256382737a11f4800b024a9b1e110 420 Hamap MF_02029 UDP-N-acetyl-D-mannosamine dehydrogenase [wecC]. 1 420 79.35 T 15-10-2018 IPR032891 UDP-N-acetyl-D-mannosamine dehydrogenase WecC GO:0009246|GO:0089714 KEGG: 00520+1.1.1.336|MetaCyc: PWY-7335 AM378_20010 c43256382737a11f4800b024a9b1e110 420 Gene3D G3DSA:3.40.50.720 2 202 4.8E-65 T 15-10-2018 AM378_19520 b93fb1fb9772497088226781b858c31b 321 SUPERFAMILY SSF53613 13 319 1.18E-82 T 15-10-2018 IPR029056 Ribokinase-like AM378_19520 b93fb1fb9772497088226781b858c31b 321 Pfam PF00294 pfkB family carbohydrate kinase 15 315 1.3E-61 T 15-10-2018 IPR011611 Carbohydrate kinase PfkB AM378_19520 b93fb1fb9772497088226781b858c31b 321 Gene3D G3DSA:3.40.1190.20 13 320 1.2E-86 T 15-10-2018 IPR029056 Ribokinase-like AM378_24105 b3c711413fea3372ff562b1daa49ea84 96 Pfam PF06865 Protein of unknown function (DUF1255) 3 93 3.4E-32 T 15-10-2018 IPR009664 Pyrimidine/purine nucleoside phosphorylase KEGG: 00230+2.4.2.15|KEGG: 00240+2.4.2.4+2.4.2.3+2.4.2.2|KEGG: 00983+2.4.2.4+2.4.2.3|MetaCyc: PWY-5532|MetaCyc: PWY-7181 AM378_24105 b3c711413fea3372ff562b1daa49ea84 96 Gene3D G3DSA:2.60.120.10 1 94 9.2E-32 T 15-10-2018 IPR014710 RmlC-like jelly roll fold AM378_24105 b3c711413fea3372ff562b1daa49ea84 96 SUPERFAMILY SSF51182 1 94 1.09E-31 T 15-10-2018 IPR011051 RmlC-like cupin domain superfamily AM378_24105 b3c711413fea3372ff562b1daa49ea84 96 Hamap MF_01537 Pyrimidine/purine nucleoside phosphorylase [ppnP]. 1 94 25.074 T 15-10-2018 IPR009664 Pyrimidine/purine nucleoside phosphorylase KEGG: 00230+2.4.2.15|KEGG: 00240+2.4.2.4+2.4.2.3+2.4.2.2|KEGG: 00983+2.4.2.4+2.4.2.3|MetaCyc: PWY-5532|MetaCyc: PWY-7181 AM378_00060 889e9ffdf9158563f30219025e661ae9 430 SUPERFAMILY SSF111352 29 409 6.8E-126 T 15-10-2018 AM378_00060 889e9ffdf9158563f30219025e661ae9 430 Gene3D G3DSA:1.10.3430.10 25 409 7.8E-141 T 15-10-2018 IPR029020 Ammonium/urea transporter AM378_00060 889e9ffdf9158563f30219025e661ae9 430 TIGRFAM TIGR00836 amt: ammonium transporter 33 428 2.7E-134 T 15-10-2018 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 AM378_00060 889e9ffdf9158563f30219025e661ae9 430 Pfam PF00909 Ammonium Transporter Family 35 428 1.0E-122 T 15-10-2018 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 AM378_00060 889e9ffdf9158563f30219025e661ae9 430 ProSitePatterns PS01219 Ammonium transporters signature. 184 209 - T 15-10-2018 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 AM378_02740 59c01e7abaed9eb6f9ea900361a5581f 746 Pfam PF03102 NeuB family 150 384 2.5E-84 T 15-10-2018 IPR013132 N-acetylneuraminic acid synthase, N-terminal GO:0016051 Reactome: R-HSA-4085001 AM378_02740 59c01e7abaed9eb6f9ea900361a5581f 746 SUPERFAMILY SSF51269 393 458 4.06E-16 T 15-10-2018 IPR036732 Antifreeze-like/N-acetylneuraminic acid synthase C-terminal domain superfamily Reactome: R-HSA-4085001 AM378_02740 59c01e7abaed9eb6f9ea900361a5581f 746 Gene3D G3DSA:3.10.580.10 9 114 3.8E-12 T 15-10-2018 AM378_02740 59c01e7abaed9eb6f9ea900361a5581f 746 SMART SM00858 401 459 9.9E-7 T 15-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 AM378_02740 59c01e7abaed9eb6f9ea900361a5581f 746 SUPERFAMILY SSF54631 12 108 5.24E-12 T 15-10-2018 AM378_02740 59c01e7abaed9eb6f9ea900361a5581f 746 Gene3D G3DSA:3.20.20.70 116 385 1.7E-99 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM378_02740 59c01e7abaed9eb6f9ea900361a5581f 746 Pfam PF08666 SAF domain 403 458 2.2E-7 T 15-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 AM378_02740 59c01e7abaed9eb6f9ea900361a5581f 746 Pfam PF01261 Xylose isomerase-like TIM barrel 492 702 3.1E-26 T 15-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain AM378_02740 59c01e7abaed9eb6f9ea900361a5581f 746 Gene3D G3DSA:3.20.20.150 482 743 9.1E-26 T 15-10-2018 AM378_02740 59c01e7abaed9eb6f9ea900361a5581f 746 Pfam PF00571 CBS domain 12 55 2.9E-4 T 15-10-2018 IPR000644 CBS domain AM378_02740 59c01e7abaed9eb6f9ea900361a5581f 746 SUPERFAMILY SSF51569 117 411 1.34E-81 T 15-10-2018 AM378_02740 59c01e7abaed9eb6f9ea900361a5581f 746 Gene3D G3DSA:3.90.1210.10 388 458 6.8E-18 T 15-10-2018 AM378_02740 59c01e7abaed9eb6f9ea900361a5581f 746 SUPERFAMILY SSF51658 460 746 2.19E-25 T 15-10-2018 IPR036237 Xylose isomerase-like superfamily AM378_04720 4771f7b9aef7be366c72bf9dc93ebded 109 Gene3D G3DSA:3.30.530.20 9 108 1.2E-10 T 15-10-2018 IPR023393 START-like domain superfamily AM378_04720 4771f7b9aef7be366c72bf9dc93ebded 109 SUPERFAMILY SSF55961 8 97 1.95E-15 T 15-10-2018 AM378_04720 4771f7b9aef7be366c72bf9dc93ebded 109 Pfam PF08327 Activator of Hsp90 ATPase homolog 1-like protein 20 82 1.4E-5 T 15-10-2018 IPR013538 Activator of Hsp90 ATPase homologue 1-like AM378_17225 baaad1166385664162abbcbebc89a5b9 330 Pfam PF00005 ABC transporter 20 161 2.0E-35 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM378_17225 baaad1166385664162abbcbebc89a5b9 330 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM378_17225 baaad1166385664162abbcbebc89a5b9 330 SUPERFAMILY SSF52540 4 242 1.29E-85 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_17225 baaad1166385664162abbcbebc89a5b9 330 SUPERFAMILY SSF50331 256 312 7.37E-6 T 15-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal AM378_17225 baaad1166385664162abbcbebc89a5b9 330 SMART SM00382 28 211 1.3E-15 T 15-10-2018 IPR003593 AAA+ ATPase domain AM378_17225 baaad1166385664162abbcbebc89a5b9 330 Gene3D G3DSA:3.40.50.300 2 262 2.7E-79 T 15-10-2018 AM378_17225 baaad1166385664162abbcbebc89a5b9 330 Pfam PF08402 TOBE domain 257 323 1.9E-4 T 15-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 AM378_04285 e382e65831e3b12a5c474d36e83b94df 79 Pfam PF06183 DinI-like family 14 76 2.3E-29 T 15-10-2018 IPR010391 DNA damage-inducible protein DinI-like AM378_04285 e382e65831e3b12a5c474d36e83b94df 79 SUPERFAMILY SSF54857 1 78 8.63E-28 T 15-10-2018 IPR036687 DinI-like superfamily AM378_04285 e382e65831e3b12a5c474d36e83b94df 79 Gene3D G3DSA:3.30.910.10 1 79 1.1E-32 T 15-10-2018 IPR036687 DinI-like superfamily AM378_02995 2c1909e63b19b320fe75cb901fc36913 409 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 294 385 1.2E-25 T 15-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AM378_02995 2c1909e63b19b320fe75cb901fc36913 409 SUPERFAMILY SSF56601 19 294 6.43E-81 T 15-10-2018 IPR012338 Beta-lactamase/transpeptidase-like AM378_02995 2c1909e63b19b320fe75cb901fc36913 409 Gene3D G3DSA:3.40.710.10 34 293 9.7E-91 T 15-10-2018 AM378_02995 2c1909e63b19b320fe75cb901fc36913 409 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 74 85 1.2E-17 T 15-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 AM378_02995 2c1909e63b19b320fe75cb901fc36913 409 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 160 173 1.2E-17 T 15-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 AM378_02995 2c1909e63b19b320fe75cb901fc36913 409 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 133 150 1.2E-17 T 15-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 AM378_02995 2c1909e63b19b320fe75cb901fc36913 409 Gene3D G3DSA:2.60.410.10 294 385 1.2E-28 T 15-10-2018 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AM378_02995 2c1909e63b19b320fe75cb901fc36913 409 SUPERFAMILY SSF69189 294 387 3.92E-26 T 15-10-2018 IPR015956 Penicillin-binding protein, C-terminal domain superfamily GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AM378_02995 2c1909e63b19b320fe75cb901fc36913 409 SMART SM00936 294 385 8.5E-36 T 15-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AM378_02995 2c1909e63b19b320fe75cb901fc36913 409 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 42 274 8.4E-97 T 15-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 AM378_15075 6c026a423b0892f6a7c56934509adde8 297 SUPERFAMILY SSF53850 93 290 1.77E-20 T 15-10-2018 AM378_15075 6c026a423b0892f6a7c56934509adde8 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 8.9E-8 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_15075 6c026a423b0892f6a7c56934509adde8 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 8.9E-8 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_15075 6c026a423b0892f6a7c56934509adde8 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 8.9E-8 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_15075 6c026a423b0892f6a7c56934509adde8 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 64 6.5E-19 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_15075 6c026a423b0892f6a7c56934509adde8 297 Pfam PF03466 LysR substrate binding domain 93 289 1.2E-14 T 15-10-2018 IPR005119 LysR, substrate-binding AM378_15075 6c026a423b0892f6a7c56934509adde8 297 Gene3D G3DSA:1.10.10.10 2 83 1.2E-25 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_15075 6c026a423b0892f6a7c56934509adde8 297 Gene3D G3DSA:3.40.190.290 89 295 4.7E-64 T 15-10-2018 AM378_15075 6c026a423b0892f6a7c56934509adde8 297 TIGRFAM TIGR03298 argP: transcriptional regulator, ArgP family 5 293 1.4E-111 T 15-10-2018 IPR017685 HTH-type transcriptional regulator ArgP AM378_15075 6c026a423b0892f6a7c56934509adde8 297 SUPERFAMILY SSF46785 4 110 4.98E-17 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM378_15075 6c026a423b0892f6a7c56934509adde8 297 Hamap MF_00513 HTH-type transcriptional regulator ArgP [argP]. 1 296 57.619 T 15-10-2018 IPR023490 HTH-type transcriptional regulator ArgP, Gammaproteobacteria AM378_16195 28924eaf097d1fc43b6b96f9f99948d1 69 Pfam PF16080 Bacteriophage holin family HP1 2 54 5.0E-13 T 15-10-2018 IPR032118 Bacteriophage holin HP1 family AM378_18160 968ce039f6bc2956b37231345898f21b 278 PIRSF PIRSF036778 1 278 3.2E-82 T 15-10-2018 IPR014621 Uncharacterised conserved protein UCP036778, sugar epimerase-type AM378_18160 968ce039f6bc2956b37231345898f21b 278 Gene3D G3DSA:3.20.20.150 1 277 2.5E-58 T 15-10-2018 AM378_18160 968ce039f6bc2956b37231345898f21b 278 SUPERFAMILY SSF51658 5 277 1.13E-58 T 15-10-2018 IPR036237 Xylose isomerase-like superfamily AM378_18160 968ce039f6bc2956b37231345898f21b 278 Pfam PF01261 Xylose isomerase-like TIM barrel 24 227 5.6E-12 T 15-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain AM378_17080 19e9cd9b20aa2ee1b89a5a07a0dbf3f2 336 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 95 113 - T 15-10-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 AM378_17080 19e9cd9b20aa2ee1b89a5a07a0dbf3f2 336 PIRSF PIRSF006621 4 330 2.2E-70 T 15-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 AM378_17080 19e9cd9b20aa2ee1b89a5a07a0dbf3f2 336 SUPERFAMILY SSF51395 13 312 1.69E-72 T 15-10-2018 AM378_17080 19e9cd9b20aa2ee1b89a5a07a0dbf3f2 336 Pfam PF01207 Dihydrouridine synthase (Dus) 17 324 5.1E-94 T 15-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 AM378_17080 19e9cd9b20aa2ee1b89a5a07a0dbf3f2 336 Gene3D G3DSA:1.20.120.1460 257 334 1.8E-23 T 15-10-2018 AM378_17080 19e9cd9b20aa2ee1b89a5a07a0dbf3f2 336 Gene3D G3DSA:3.20.20.70 11 253 1.1E-71 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM378_17080 19e9cd9b20aa2ee1b89a5a07a0dbf3f2 336 Hamap MF_02041 tRNA-dihydrouridine(20/20a) synthase [dusA]. 9 330 53.08 T 15-10-2018 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 AM378_17080 19e9cd9b20aa2ee1b89a5a07a0dbf3f2 336 TIGRFAM TIGR00742 yjbN: tRNA dihydrouridine synthase A 13 329 7.5E-164 T 15-10-2018 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 AM378_07425 beccabf8406ef2975e3f204fadf66da3 408 Gene3D G3DSA:3.30.70.360 211 324 1.8E-149 T 15-10-2018 AM378_07425 beccabf8406ef2975e3f204fadf66da3 408 TIGRFAM TIGR01879 hydantase: amidase, hydantoinase/carbamoylase family 8 404 8.2E-123 T 15-10-2018 IPR010158 Amidase, carbamoylase-type GO:0016813 AM378_07425 beccabf8406ef2975e3f204fadf66da3 408 SUPERFAMILY SSF55031 211 326 8.52E-28 T 15-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain AM378_07425 beccabf8406ef2975e3f204fadf66da3 408 Gene3D G3DSA:3.40.630.10 17 399 1.8E-149 T 15-10-2018 AM378_07425 beccabf8406ef2975e3f204fadf66da3 408 PIRSF PIRSF001235 2 408 9.3E-129 T 15-10-2018 IPR010158 Amidase, carbamoylase-type GO:0016813 AM378_07425 beccabf8406ef2975e3f204fadf66da3 408 Pfam PF01546 Peptidase family M20/M25/M40 79 403 2.7E-35 T 15-10-2018 IPR002933 Peptidase M20 GO:0016787 AM378_07425 beccabf8406ef2975e3f204fadf66da3 408 SUPERFAMILY SSF53187 3 406 1.4E-92 T 15-10-2018 AM378_04570 64cbf29eb6114d4ea455950954b3376c 113 Pfam PF10709 Protein of unknown function (DUF2511) 25 111 6.8E-44 T 15-10-2018 IPR019648 Protein of unknown function DUF2511 AM378_00580 c9bb89794a467eea48f3d8e9de8c16f9 159 Gene3D G3DSA:2.40.50.140 1 67 1.4E-17 T 15-10-2018 AM378_00580 c9bb89794a467eea48f3d8e9de8c16f9 159 SUPERFAMILY SSF50249 2 62 1.0E-10 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold AM378_00580 c9bb89794a467eea48f3d8e9de8c16f9 159 SMART SM00357 2 63 0.0024 T 15-10-2018 IPR011129 Cold shock domain GO:0003676 AM378_00580 c9bb89794a467eea48f3d8e9de8c16f9 159 Pfam PF00313 'Cold-shock' DNA-binding domain 1 61 3.4E-11 T 15-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AM378_22735 b63351c7ee5e533c3c4bbaf9ad6654b9 490 Pfam PF00939 Sodium:sulfate symporter transmembrane region 13 490 1.8E-137 T 15-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 AM378_22735 b63351c7ee5e533c3c4bbaf9ad6654b9 490 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 27 484 7.8E-114 T 15-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 AM378_22735 b63351c7ee5e533c3c4bbaf9ad6654b9 490 PIRSF PIRSF002457 3 490 8.8E-135 T 15-10-2018 IPR030676 Citrate carrier CitT-related AM378_15300 132cce758e628cdb9b7e4ebe861192e0 105 Gene3D G3DSA:2.102.10.10 1 101 1.4E-30 T 15-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 AM378_15300 132cce758e628cdb9b7e4ebe861192e0 105 SUPERFAMILY SSF50022 1 100 1.7E-31 T 15-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 AM378_15300 132cce758e628cdb9b7e4ebe861192e0 105 Pfam PF00355 Rieske [2Fe-2S] domain 2 89 1.1E-19 T 15-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 AM378_18225 07670831a0b1d774f96f66cf6b72ecf0 339 Pfam PF00107 Zinc-binding dehydrogenase 162 256 1.4E-15 T 15-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AM378_18225 07670831a0b1d774f96f66cf6b72ecf0 339 Pfam PF16884 N-terminal domain of oxidoreductase 8 112 3.2E-32 T 15-10-2018 AM378_18225 07670831a0b1d774f96f66cf6b72ecf0 339 SMART SM00829 19 336 4.6E-4 T 15-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AM378_18225 07670831a0b1d774f96f66cf6b72ecf0 339 Gene3D G3DSA:3.40.50.720 129 307 2.3E-109 T 15-10-2018 AM378_18225 07670831a0b1d774f96f66cf6b72ecf0 339 Gene3D G3DSA:3.90.180.10 12 336 2.3E-109 T 15-10-2018 AM378_18225 07670831a0b1d774f96f66cf6b72ecf0 339 SUPERFAMILY SSF50129 5 146 5.39E-30 T 15-10-2018 IPR011032 GroES-like superfamily AM378_18225 07670831a0b1d774f96f66cf6b72ecf0 339 SUPERFAMILY SSF51735 127 259 3.09E-38 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily AM378_03565 1ad63dd7fc1f05f8cefd3a42be48da2f 1482 Gene3D G3DSA:1.20.58.850 620 830 3.4E-139 T 15-10-2018 AM378_03565 1ad63dd7fc1f05f8cefd3a42be48da2f 1482 Pfam PF04310 MukB N-terminal 2 227 6.3E-125 T 15-10-2018 IPR007406 MukB, N-terminal domain GO:0003677|GO:0005524|GO:0007059|GO:0009295|GO:0030261 AM378_03565 1ad63dd7fc1f05f8cefd3a42be48da2f 1482 Gene3D G3DSA:1.20.58.850 581 852 3.4E-139 T 15-10-2018 AM378_03565 1ad63dd7fc1f05f8cefd3a42be48da2f 1482 Pfam PF13558 Putative exonuclease SbcCD, C subunit 1336 1424 2.2E-14 T 15-10-2018 AM378_03565 1ad63dd7fc1f05f8cefd3a42be48da2f 1482 SUPERFAMILY SSF52540 22 224 1.83E-23 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_03565 1ad63dd7fc1f05f8cefd3a42be48da2f 1482 Gene3D G3DSA:1.20.1060.30 667 778 3.4E-139 T 15-10-2018 AM378_03565 1ad63dd7fc1f05f8cefd3a42be48da2f 1482 Gene3D G3DSA:3.40.1140.10 1383 1468 4.4E-38 T 15-10-2018 AM378_03565 1ad63dd7fc1f05f8cefd3a42be48da2f 1482 Gene3D G3DSA:3.40.1140.10 1 227 3.6E-102 T 15-10-2018 AM378_03565 1ad63dd7fc1f05f8cefd3a42be48da2f 1482 PIRSF PIRSF005246 1 1479 0.0 T 15-10-2018 IPR012090 Chromosome partition protein MukB GO:0003677|GO:0005524|GO:0007059|GO:0009295|GO:0030261 AM378_03565 1ad63dd7fc1f05f8cefd3a42be48da2f 1482 Hamap MF_01800 Chromosome partition protein MukB [mukB]. 1 1471 11.07 T 15-10-2018 IPR012090 Chromosome partition protein MukB GO:0003677|GO:0005524|GO:0007059|GO:0009295|GO:0030261 AM378_03565 1ad63dd7fc1f05f8cefd3a42be48da2f 1482 SUPERFAMILY SSF52540 21 1433 1.6E-6 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_03565 1ad63dd7fc1f05f8cefd3a42be48da2f 1482 Pfam PF16330 MukB hinge domain 645 810 2.6E-74 T 15-10-2018 IPR032520 MukB, hinge domain AM378_20160 1d2b35044b8aa4f343d64cc2be7d9fa4 316 Gene3D G3DSA:1.20.58.340 240 316 1.4E-25 T 15-10-2018 AM378_20160 1d2b35044b8aa4f343d64cc2be7d9fa4 316 TIGRFAM TIGR00383 corA: magnesium and cobalt transport protein CorA 5 316 7.3E-108 T 15-10-2018 IPR004488 Magnesium/cobalt transport protein CorA GO:0006824|GO:0015087|GO:0015095|GO:0015693|GO:0016020 AM378_20160 1d2b35044b8aa4f343d64cc2be7d9fa4 316 SUPERFAMILY SSF144083 251 314 1.83E-20 T 15-10-2018 AM378_20160 1d2b35044b8aa4f343d64cc2be7d9fa4 316 Pfam PF01544 CorA-like Mg2+ transporter protein 26 312 2.0E-54 T 15-10-2018 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 AM378_20160 1d2b35044b8aa4f343d64cc2be7d9fa4 316 SUPERFAMILY SSF143865 1 255 1.44E-37 T 15-10-2018 AM378_03420 02cefff12a73739cd2d055fa4c844e6b 203 TIGRFAM TIGR00547 lolA: outer membrane lipoprotein carrier protein LolA 1 203 2.2E-101 T 15-10-2018 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 AM378_03420 02cefff12a73739cd2d055fa4c844e6b 203 Pfam PF03548 Outer membrane lipoprotein carrier protein LolA 33 191 6.7E-59 T 15-10-2018 IPR004564 Outer membrane lipoprotein carrier protein LolA-like AM378_03420 02cefff12a73739cd2d055fa4c844e6b 203 Hamap MF_00240 Outer-membrane lipoprotein carrier protein [lolA]. 10 201 32.13 T 15-10-2018 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 AM378_03420 02cefff12a73739cd2d055fa4c844e6b 203 Gene3D G3DSA:2.50.20.10 20 202 8.4E-56 T 15-10-2018 AM378_03420 02cefff12a73739cd2d055fa4c844e6b 203 SUPERFAMILY SSF89392 22 202 1.22E-57 T 15-10-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX AM378_22660 f5c0a18e2769cd0bd0c9fb8cea9cb430 786 Gene3D G3DSA:2.60.450.10 46 167 5.7E-7 T 15-10-2018 AM378_22660 f5c0a18e2769cd0bd0c9fb8cea9cb430 786 Pfam PF03968 OstA-like protein 52 193 2.4E-27 T 15-10-2018 IPR005653 Organic solvent tolerance-like, N-terminal AM378_22660 f5c0a18e2769cd0bd0c9fb8cea9cb430 786 Hamap MF_01411 LPS-assembly protein LptD [lptD]. 3 765 20.607 T 15-10-2018 IPR020889 LPS-assembly protein LptD GO:0009279|GO:0010033|GO:0015920|GO:0043165 AM378_22660 f5c0a18e2769cd0bd0c9fb8cea9cb430 786 Pfam PF04453 Organic solvent tolerance protein 304 699 7.4E-108 T 15-10-2018 IPR007543 Organic solvent tolerance protein, C-terminal GO:0010033|GO:0019867|GO:0061024 AM378_10955 03c5abf6954ca955eb3edf613babae91 350 Pfam PF03060 Nitronate monooxygenase 12 345 5.7E-83 T 15-10-2018 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 AM378_10955 03c5abf6954ca955eb3edf613babae91 350 Gene3D G3DSA:3.20.20.70 5 350 8.3E-114 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM378_10955 03c5abf6954ca955eb3edf613babae91 350 SUPERFAMILY SSF51412 8 348 4.58E-59 T 15-10-2018 AM378_03290 e0707c1dd2f09714c35916ac32df963a 278 SMART SM00644 33 179 4.4E-29 T 15-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 AM378_03290 e0707c1dd2f09714c35916ac32df963a 278 SUPERFAMILY SSF47090 201 274 1.26E-16 T 15-10-2018 IPR036365 PGBD-like superfamily AM378_03290 e0707c1dd2f09714c35916ac32df963a 278 Gene3D G3DSA:1.10.101.10 194 276 9.8E-27 T 15-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 AM378_03290 e0707c1dd2f09714c35916ac32df963a 278 SUPERFAMILY SSF55846 38 195 1.02E-52 T 15-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 AM378_03290 e0707c1dd2f09714c35916ac32df963a 278 Gene3D G3DSA:3.40.80.10 43 193 5.9E-50 T 15-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 AM378_03290 e0707c1dd2f09714c35916ac32df963a 278 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 43 180 8.2E-28 T 15-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 AM378_23640 1ad5df4366a1431b6f61dd2c49db687f 367 PIRSF PIRSF000729 1 367 1.6E-141 T 15-10-2018 IPR011529 Glutamate 5-kinase GO:0004349|GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922 AM378_23640 1ad5df4366a1431b6f61dd2c49db687f 367 Hamap MF_00456 Glutamate 5-kinase [proB]. 5 263 36.093 T 15-10-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 AM378_23640 1ad5df4366a1431b6f61dd2c49db687f 367 Pfam PF01472 PUA domain 276 350 1.1E-21 T 15-10-2018 IPR002478 PUA domain GO:0003723 AM378_23640 1ad5df4366a1431b6f61dd2c49db687f 367 SUPERFAMILY SSF88697 276 366 7.18E-24 T 15-10-2018 IPR015947 PUA-like superfamily AM378_23640 1ad5df4366a1431b6f61dd2c49db687f 367 Pfam PF00696 Amino acid kinase family 6 234 1.7E-43 T 15-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 AM378_23640 1ad5df4366a1431b6f61dd2c49db687f 367 ProSitePatterns PS00902 Glutamate 5-kinase signature. 207 224 - T 15-10-2018 IPR019797 Glutamate 5-kinase, conserved site GO:0004349|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 AM378_23640 1ad5df4366a1431b6f61dd2c49db687f 367 TIGRFAM TIGR01027 proB: glutamate 5-kinase 5 365 1.7E-152 T 15-10-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 AM378_23640 1ad5df4366a1431b6f61dd2c49db687f 367 Gene3D G3DSA:2.30.130.10 266 367 2.2E-29 T 15-10-2018 IPR036974 PUA domain superfamily GO:0003723 AM378_23640 1ad5df4366a1431b6f61dd2c49db687f 367 Gene3D G3DSA:3.40.1160.10 2 258 1.9E-88 T 15-10-2018 IPR036393 Acetylglutamate kinase-like superfamily AM378_23640 1ad5df4366a1431b6f61dd2c49db687f 367 PRINTS PR00474 Glutamate 5-kinase family signature 76 104 8.6E-57 T 15-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 AM378_23640 1ad5df4366a1431b6f61dd2c49db687f 367 PRINTS PR00474 Glutamate 5-kinase family signature 148 175 8.6E-57 T 15-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 AM378_23640 1ad5df4366a1431b6f61dd2c49db687f 367 PRINTS PR00474 Glutamate 5-kinase family signature 116 137 8.6E-57 T 15-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 AM378_23640 1ad5df4366a1431b6f61dd2c49db687f 367 PRINTS PR00474 Glutamate 5-kinase family signature 209 229 8.6E-57 T 15-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 AM378_23640 1ad5df4366a1431b6f61dd2c49db687f 367 PRINTS PR00474 Glutamate 5-kinase family signature 42 56 8.6E-57 T 15-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 AM378_23640 1ad5df4366a1431b6f61dd2c49db687f 367 SMART SM00359 276 359 1.1E-23 T 15-10-2018 IPR002478 PUA domain GO:0003723 AM378_23640 1ad5df4366a1431b6f61dd2c49db687f 367 SUPERFAMILY SSF53633 6 256 1.28E-65 T 15-10-2018 IPR036393 Acetylglutamate kinase-like superfamily AM378_23865 268ef10e9ad96cc91920f50abee5da9c 499 SUPERFAMILY SSF53720 14 498 5.63E-165 T 15-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 AM378_23865 268ef10e9ad96cc91920f50abee5da9c 499 Gene3D G3DSA:3.40.605.10 36 493 1.4E-179 T 15-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 AM378_23865 268ef10e9ad96cc91920f50abee5da9c 499 Pfam PF00171 Aldehyde dehydrogenase family 28 495 1.1E-165 T 15-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 AM378_23865 268ef10e9ad96cc91920f50abee5da9c 499 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 299 310 - T 15-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 AM378_23865 268ef10e9ad96cc91920f50abee5da9c 499 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 271 278 - T 15-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 AM378_23865 268ef10e9ad96cc91920f50abee5da9c 499 Gene3D G3DSA:3.40.309.10 275 464 1.4E-179 T 15-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 AM378_18800 407538fd3c170cb32fef900a29be6dc0 300 Pfam PF16916 Dimerisation domain of Zinc Transporter 210 287 3.2E-27 T 15-10-2018 IPR027470 Cation efflux protein, cytoplasmic domain AM378_18800 407538fd3c170cb32fef900a29be6dc0 300 SUPERFAMILY SSF160240 209 288 9.42E-26 T 15-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 AM378_18800 407538fd3c170cb32fef900a29be6dc0 300 Gene3D G3DSA:1.20.1510.10 8 206 1.4E-65 T 15-10-2018 IPR027469 Cation efflux transmembrane domain superfamily AM378_18800 407538fd3c170cb32fef900a29be6dc0 300 SUPERFAMILY SSF161111 8 207 5.62E-50 T 15-10-2018 IPR027469 Cation efflux transmembrane domain superfamily AM378_18800 407538fd3c170cb32fef900a29be6dc0 300 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 10 288 2.3E-76 T 15-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 AM378_18800 407538fd3c170cb32fef900a29be6dc0 300 Gene3D G3DSA:3.30.70.1350 207 290 1.1E-34 T 15-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 AM378_18800 407538fd3c170cb32fef900a29be6dc0 300 Hamap MF_01425 Ferrous-iron efflux pump FieF [fieF]. 1 300 60.79 T 15-10-2018 IPR023783 Cation efflux pump FieF GO:0006829|GO:0015684|GO:0016021|GO:0046873 AM378_18800 407538fd3c170cb32fef900a29be6dc0 300 Pfam PF01545 Cation efflux family 15 206 2.4E-43 T 15-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 AM378_17505 709bcd5dd1eb61d2b111c3d7271f6582 232 Gene3D G3DSA:3.30.1140.32 108 208 3.9E-46 T 15-10-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM378_17505 709bcd5dd1eb61d2b111c3d7271f6582 232 ProSitePatterns PS00548 Ribosomal protein S3 signature. 163 197 - T 15-10-2018 IPR018280 Ribosomal protein S3, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM378_17505 709bcd5dd1eb61d2b111c3d7271f6582 232 Hamap MF_01309_B 30S ribosomal protein S3 [rpsC]. 1 206 39.213 T 15-10-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 AM378_17505 709bcd5dd1eb61d2b111c3d7271f6582 232 SMART SM00322 60 125 1.6E-6 T 15-10-2018 IPR004087 K Homology domain GO:0003676 AM378_17505 709bcd5dd1eb61d2b111c3d7271f6582 232 Pfam PF07650 KH domain 38 111 6.0E-19 T 15-10-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM378_17505 709bcd5dd1eb61d2b111c3d7271f6582 232 Pfam PF00189 Ribosomal protein S3, C-terminal domain 120 202 2.0E-41 T 15-10-2018 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM378_17505 709bcd5dd1eb61d2b111c3d7271f6582 232 TIGRFAM TIGR01009 rpsC_bact: ribosomal protein uS3 1 209 1.2E-100 T 15-10-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 AM378_17505 709bcd5dd1eb61d2b111c3d7271f6582 232 Gene3D G3DSA:3.30.300.20 17 107 8.1E-30 T 15-10-2018 IPR015946 K homology domain-like, alpha/beta AM378_17505 709bcd5dd1eb61d2b111c3d7271f6582 232 SUPERFAMILY SSF54821 108 206 6.93E-41 T 15-10-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM378_17505 709bcd5dd1eb61d2b111c3d7271f6582 232 SUPERFAMILY SSF54814 2 106 1.54E-37 T 15-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 AM378_22280 ad3cd777cb48b93f499413a8e688fc88 145 Pfam PF03603 DNA polymerase III psi subunit 3 127 4.9E-47 T 15-10-2018 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM378_22280 ad3cd777cb48b93f499413a8e688fc88 145 SUPERFAMILY SSF102220 27 135 5.62E-34 T 15-10-2018 IPR036654 DNA polymerase III, psi subunit superfamily GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM378_22280 ad3cd777cb48b93f499413a8e688fc88 145 ProDom PD032475 DNA POLYMERASE PSI SUBUNIT III TRANSFERASE NUCLEOTIDYLTRANSFERASE III 3D-STRUCTURE DNA-DIRECTED 34 125 2.0E-34 T 15-10-2018 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM378_22280 ad3cd777cb48b93f499413a8e688fc88 145 Gene3D G3DSA:3.40.50.10220 33 136 8.4E-38 T 15-10-2018 IPR036654 DNA polymerase III, psi subunit superfamily GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM378_22280 ad3cd777cb48b93f499413a8e688fc88 145 PIRSF PIRSF029225 2 131 3.0E-49 T 15-10-2018 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM378_02420 b98c7997fe0dc4a8fc6d7e074d9c95e7 555 Hamap MF_00750 Oxygen-dependent choline dehydrogenase [betA]. 1 554 62.781 T 15-10-2018 IPR011533 Oxygen-dependent choline dehydrogenase GO:0008812|GO:0019285 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494 AM378_02420 b98c7997fe0dc4a8fc6d7e074d9c95e7 555 PIRSF PIRSF000137 1 538 4.5E-140 T 15-10-2018 IPR012132 Glucose-methanol-choline oxidoreductase GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 AM378_02420 b98c7997fe0dc4a8fc6d7e074d9c95e7 555 ProSitePatterns PS00623 GMC oxidoreductases signature 1. 82 105 - T 15-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 AM378_02420 b98c7997fe0dc4a8fc6d7e074d9c95e7 555 ProSitePatterns PS00624 GMC oxidoreductases signature 2. 259 273 - T 15-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 AM378_02420 b98c7997fe0dc4a8fc6d7e074d9c95e7 555 Gene3D G3DSA:3.30.410.40 152 474 5.9E-179 T 15-10-2018 AM378_02420 b98c7997fe0dc4a8fc6d7e074d9c95e7 555 TIGRFAM TIGR01810 betA: choline dehydrogenase 4 537 4.0E-291 T 15-10-2018 IPR011533 Oxygen-dependent choline dehydrogenase GO:0008812|GO:0019285 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494 AM378_02420 b98c7997fe0dc4a8fc6d7e074d9c95e7 555 Gene3D G3DSA:3.50.50.60 2 531 5.9E-179 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AM378_02420 b98c7997fe0dc4a8fc6d7e074d9c95e7 555 SUPERFAMILY SSF51905 1 535 1.73E-89 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AM378_02420 b98c7997fe0dc4a8fc6d7e074d9c95e7 555 Pfam PF05199 GMC oxidoreductase 393 527 2.3E-41 T 15-10-2018 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 Reactome: R-HSA-6798163 AM378_02420 b98c7997fe0dc4a8fc6d7e074d9c95e7 555 Pfam PF00732 GMC oxidoreductase 3 300 1.1E-98 T 15-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 AM378_02420 b98c7997fe0dc4a8fc6d7e074d9c95e7 555 Gene3D G3DSA:1.10.1220.110 97 151 5.9E-179 T 15-10-2018 AM378_02420 b98c7997fe0dc4a8fc6d7e074d9c95e7 555 Gene3D G3DSA:4.10.450.10 36 199 5.9E-179 T 15-10-2018 IPR027424 Glucose Oxidase, domain 2 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494|Reactome: R-HSA-6798163 AM378_02420 b98c7997fe0dc4a8fc6d7e074d9c95e7 555 SUPERFAMILY SSF54373 295 477 2.94E-64 T 15-10-2018 AM378_11770 20187b42b380cd87429c80958c5d9bdc 325 ProSitePatterns PS00668 Respiratory-chain NADH dehydrogenase subunit 1 signature 2. 211 224 - T 15-10-2018 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM378_11770 20187b42b380cd87429c80958c5d9bdc 325 Pfam PF00146 NADH dehydrogenase 17 316 4.6E-119 T 15-10-2018 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM378_11770 20187b42b380cd87429c80958c5d9bdc 325 Hamap MF_01350 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic [ndhA]. 10 323 23.772 T 15-10-2018 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM378_11770 20187b42b380cd87429c80958c5d9bdc 325 ProSitePatterns PS00667 Respiratory-chain NADH dehydrogenase subunit 1 signature 1. 56 71 - T 15-10-2018 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM378_23085 3c5f3691eba39731b5806f8f1098e4ee 476 SUPERFAMILY SSF75615 114 208 4.97E-28 T 15-10-2018 AM378_23085 3c5f3691eba39731b5806f8f1098e4ee 476 Gene3D G3DSA:3.40.1010.10 217 334 4.9E-44 T 15-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 AM378_23085 3c5f3691eba39731b5806f8f1098e4ee 476 TIGRFAM TIGR01470 cysG_Nterm: siroheme synthase, N-terminal domain 4 207 2.5E-81 T 15-10-2018 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 AM378_23085 3c5f3691eba39731b5806f8f1098e4ee 476 Pfam PF14824 Sirohaem biosynthesis protein central 119 145 5.5E-8 T 15-10-2018 IPR028281 Siroheme synthase, central domain KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 AM378_23085 3c5f3691eba39731b5806f8f1098e4ee 476 SUPERFAMILY SSF51735 2 113 7.88E-23 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily AM378_23085 3c5f3691eba39731b5806f8f1098e4ee 476 Pfam PF10414 Sirohaem synthase dimerisation region 150 207 1.8E-22 T 15-10-2018 IPR019478 Sirohaem synthase, dimerisation domain GO:0006779|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 AM378_23085 3c5f3691eba39731b5806f8f1098e4ee 476 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 219 452 5.4E-91 T 15-10-2018 IPR006366 Uroporphyrin-III C-methyltransferase GO:0008168|GO:0019354 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 AM378_23085 3c5f3691eba39731b5806f8f1098e4ee 476 PIRSF PIRSF036426 1 469 2.0E-203 T 15-10-2018 IPR012409 Sirohaem synthase GO:0004851|GO:0009236|GO:0019354|GO:0043115|GO:0051266|GO:0051287 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 AM378_23085 3c5f3691eba39731b5806f8f1098e4ee 476 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 221 430 2.0E-49 T 15-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 AM378_23085 3c5f3691eba39731b5806f8f1098e4ee 476 Pfam PF13241 Putative NAD(P)-binding 6 115 4.1E-27 T 15-10-2018 AM378_23085 3c5f3691eba39731b5806f8f1098e4ee 476 Gene3D G3DSA:3.30.160.110 113 148 5.1E-19 T 15-10-2018 AM378_23085 3c5f3691eba39731b5806f8f1098e4ee 476 Gene3D G3DSA:1.10.8.210 149 210 3.2E-16 T 15-10-2018 IPR037115 Sirohaem synthase, dimerisation domain superfamily GO:0006779|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 AM378_23085 3c5f3691eba39731b5806f8f1098e4ee 476 SUPERFAMILY SSF53790 218 460 2.36E-79 T 15-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 AM378_23085 3c5f3691eba39731b5806f8f1098e4ee 476 Gene3D G3DSA:3.40.50.720 1 112 4.8E-32 T 15-10-2018 AM378_23085 3c5f3691eba39731b5806f8f1098e4ee 476 Gene3D G3DSA:3.30.950.10 335 473 4.9E-45 T 15-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 AM378_23085 3c5f3691eba39731b5806f8f1098e4ee 476 Hamap MF_01646 Siroheme synthase [cysG]. 1 461 52.375 T 15-10-2018 IPR012409 Sirohaem synthase GO:0004851|GO:0009236|GO:0019354|GO:0043115|GO:0051266|GO:0051287 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 AM378_23085 3c5f3691eba39731b5806f8f1098e4ee 476 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 224 238 - T 15-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 AM378_23085 3c5f3691eba39731b5806f8f1098e4ee 476 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 299 332 - T 15-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 AM378_03820 a213cc1307035a6f6e3f45b93818a923 231 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 21 142 6.7E-43 T 15-10-2018 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 AM378_03820 a213cc1307035a6f6e3f45b93818a923 231 SUPERFAMILY SSF49584 136 224 1.14E-15 T 15-10-2018 IPR036316 Pili assembly chaperone, C-terminal domain superfamily AM378_03820 a213cc1307035a6f6e3f45b93818a923 231 PRINTS PR00969 Pili chaperone signature 124 139 6.6E-31 T 15-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM378_03820 a213cc1307035a6f6e3f45b93818a923 231 PRINTS PR00969 Pili chaperone signature 159 174 6.6E-31 T 15-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM378_03820 a213cc1307035a6f6e3f45b93818a923 231 PRINTS PR00969 Pili chaperone signature 98 115 6.6E-31 T 15-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM378_03820 a213cc1307035a6f6e3f45b93818a923 231 PRINTS PR00969 Pili chaperone signature 70 91 6.6E-31 T 15-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM378_03820 a213cc1307035a6f6e3f45b93818a923 231 PRINTS PR00969 Pili chaperone signature 21 30 6.6E-31 T 15-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM378_03820 a213cc1307035a6f6e3f45b93818a923 231 ProSitePatterns PS00635 Gram-negative pili assembly chaperone signature. 97 114 - T 15-10-2018 IPR018046 Pili assembly chaperone, conserved site AM378_03820 a213cc1307035a6f6e3f45b93818a923 231 Gene3D G3DSA:2.60.40.10 22 143 5.2E-42 T 15-10-2018 IPR013783 Immunoglobulin-like fold AM378_03820 a213cc1307035a6f6e3f45b93818a923 231 Gene3D G3DSA:2.60.40.10 144 230 1.1E-13 T 15-10-2018 IPR013783 Immunoglobulin-like fold AM378_03820 a213cc1307035a6f6e3f45b93818a923 231 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 164 223 5.8E-11 T 15-10-2018 IPR016148 Pili assembly chaperone, C-terminal AM378_03820 a213cc1307035a6f6e3f45b93818a923 231 SUPERFAMILY SSF49354 17 142 9.42E-42 T 15-10-2018 IPR008962 PapD-like superfamily AM378_12815 147269e6438c91536e05a80ddb094e95 61 Pfam PF13980 Uncharacterised protein family (UPF0370) 1 61 6.0E-37 T 15-10-2018 IPR020910 Uncharacterised protein family UPF0370 AM378_12815 147269e6438c91536e05a80ddb094e95 61 Hamap MF_01566 UPF0370 protein YpfN [ypfN]. 1 61 26.444 T 15-10-2018 IPR020910 Uncharacterised protein family UPF0370 AM378_04765 2741d42960f5aa72d2c4665e7c96b030 164 Gene3D G3DSA:1.10.10.10 2 164 5.7E-40 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_04765 2741d42960f5aa72d2c4665e7c96b030 164 Pfam PF01638 HxlR-like helix-turn-helix 20 104 3.5E-18 T 15-10-2018 IPR002577 Helix-turn-helix, HxlR type AM378_04765 2741d42960f5aa72d2c4665e7c96b030 164 SUPERFAMILY SSF46785 6 143 3.46E-31 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM378_07185 2e82385278e13cc02851edc7f899899f 157 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 38 46 - T 15-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 AM378_07185 2e82385278e13cc02851edc7f899899f 157 SUPERFAMILY SSF54292 2 77 1.11E-21 T 15-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 AM378_07185 2e82385278e13cc02851edc7f899899f 157 Pfam PF01799 [2Fe-2S] binding domain 72 144 2.2E-24 T 15-10-2018 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 AM378_07185 2e82385278e13cc02851edc7f899899f 157 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 16 52 1.1E-4 T 15-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AM378_07185 2e82385278e13cc02851edc7f899899f 157 SUPERFAMILY SSF47741 83 151 1.96E-25 T 15-10-2018 IPR036884 [2Fe-2S]-binding domain superfamily AM378_07185 2e82385278e13cc02851edc7f899899f 157 Gene3D G3DSA:3.30.365.10 1 154 2.7E-52 T 15-10-2018 AM378_05205 edc9a6475de394001041f908fb6d2d1b 511 SUPERFAMILY SSF56601 16 335 4.46E-48 T 15-10-2018 IPR012338 Beta-lactamase/transpeptidase-like AM378_05205 edc9a6475de394001041f908fb6d2d1b 511 Gene3D G3DSA:3.40.710.10 23 340 3.2E-50 T 15-10-2018 AM378_05205 edc9a6475de394001041f908fb6d2d1b 511 Pfam PF00144 Beta-lactamase 21 322 1.8E-33 T 15-10-2018 IPR001466 Beta-lactamase-related AM378_18600 d352cd7b7681c866df96fa3ea46f4056 287 ProSitePatterns PS00923 Aspartate and glutamate racemases signature 1. 93 101 - T 15-10-2018 IPR018187 Asp/Glu racemase, active site 1 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AM378_18600 d352cd7b7681c866df96fa3ea46f4056 287 SUPERFAMILY SSF53681 28 129 5.56E-32 T 15-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AM378_18600 d352cd7b7681c866df96fa3ea46f4056 287 ProSitePatterns PS00924 Aspartate and glutamate racemases signature 2. 204 214 - T 15-10-2018 IPR033134 Asp/Glu racemase, active site 2 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AM378_18600 d352cd7b7681c866df96fa3ea46f4056 287 Gene3D G3DSA:3.40.50.1860 118 231 9.4E-93 T 15-10-2018 AM378_18600 d352cd7b7681c866df96fa3ea46f4056 287 Pfam PF01177 Asp/Glu/Hydantoin racemase 30 239 4.7E-25 T 15-10-2018 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AM378_18600 d352cd7b7681c866df96fa3ea46f4056 287 Gene3D G3DSA:3.40.50.1860 30 265 9.4E-93 T 15-10-2018 AM378_18600 d352cd7b7681c866df96fa3ea46f4056 287 SUPERFAMILY SSF53681 131 283 6.1E-33 T 15-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AM378_18600 d352cd7b7681c866df96fa3ea46f4056 287 Hamap MF_00258 Glutamate racemase [murI]. 26 278 34.715 T 15-10-2018 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AM378_18600 d352cd7b7681c866df96fa3ea46f4056 287 TIGRFAM TIGR00067 glut_race: glutamate racemase 28 274 6.1E-87 T 15-10-2018 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AM378_05560 6d59a83f49a2735e8107271cdb7a56b5 384 Gene3D G3DSA:3.90.1150.10 254 381 2.1E-38 T 15-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AM378_05560 6d59a83f49a2735e8107271cdb7a56b5 384 Gene3D G3DSA:3.40.640.10 1 252 2.1E-92 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AM378_05560 6d59a83f49a2735e8107271cdb7a56b5 384 PIRSF PIRSF000390 1 381 2.1E-110 T 15-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase AM378_05560 6d59a83f49a2735e8107271cdb7a56b5 384 SUPERFAMILY SSF53383 4 376 4.3E-112 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM378_05560 6d59a83f49a2735e8107271cdb7a56b5 384 Hamap MF_01167 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase [arnB]. 1 379 70.345 T 15-10-2018 IPR022850 UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase, ArnB GO:0008483 KEGG: 00520+2.6.1.87 AM378_05560 6d59a83f49a2735e8107271cdb7a56b5 384 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 12 373 6.7E-128 T 15-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase AM378_23305 e7f3c858d48d05adcdc39db7e32a8b4a 453 SMART SM00382 99 247 1.1E-8 T 15-10-2018 IPR003593 AAA+ ATPase domain AM378_23305 e7f3c858d48d05adcdc39db7e32a8b4a 453 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 269 282 - T 15-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 AM378_23305 e7f3c858d48d05adcdc39db7e32a8b4a 453 SMART SM00963 1 86 2.2E-36 T 15-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 AM378_23305 e7f3c858d48d05adcdc39db7e32a8b4a 453 Pfam PF02978 Signal peptide binding domain 329 427 3.7E-32 T 15-10-2018 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 AM378_23305 e7f3c858d48d05adcdc39db7e32a8b4a 453 SUPERFAMILY SSF52540 42 353 1.15E-56 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_23305 e7f3c858d48d05adcdc39db7e32a8b4a 453 SUPERFAMILY SSF47446 298 431 4.32E-46 T 15-10-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 AM378_23305 e7f3c858d48d05adcdc39db7e32a8b4a 453 Pfam PF02881 SRP54-type protein, helical bundle domain 5 82 3.0E-22 T 15-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 AM378_23305 e7f3c858d48d05adcdc39db7e32a8b4a 453 Gene3D G3DSA:1.10.260.30 328 450 5.4E-45 T 15-10-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 AM378_23305 e7f3c858d48d05adcdc39db7e32a8b4a 453 Gene3D G3DSA:3.40.50.300 91 285 9.7E-123 T 15-10-2018 AM378_23305 e7f3c858d48d05adcdc39db7e32a8b4a 453 Pfam PF00448 SRP54-type protein, GTPase domain 100 296 8.3E-75 T 15-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 AM378_23305 e7f3c858d48d05adcdc39db7e32a8b4a 453 Hamap MF_00306 Signal recognition particle 54 kDa protein [srp54]. 5 439 34.875 T 15-10-2018 IPR022941 Signal recognition particle, SRP54 subunit GO:0003924|GO:0005525|GO:0006614|GO:0048500 Reactome: R-HSA-1799339 AM378_23305 e7f3c858d48d05adcdc39db7e32a8b4a 453 SMART SM00962 100 296 1.9E-116 T 15-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 AM378_23305 e7f3c858d48d05adcdc39db7e32a8b4a 453 TIGRFAM TIGR00959 ffh: signal recognition particle protein 2 429 9.9E-179 T 15-10-2018 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 AM378_23305 e7f3c858d48d05adcdc39db7e32a8b4a 453 Gene3D G3DSA:1.20.120.140 4 305 9.7E-123 T 15-10-2018 AM378_23175 84bc25aff7cd9798c2f3eceee5a4365f 205 Pfam PF02661 Fic/DOC family 59 158 3.6E-19 T 15-10-2018 IPR003812 Fido domain AM378_23175 84bc25aff7cd9798c2f3eceee5a4365f 205 Gene3D G3DSA:1.10.3290.10 3 205 1.9E-47 T 15-10-2018 IPR036597 Fido-like domain superfamily AM378_23175 84bc25aff7cd9798c2f3eceee5a4365f 205 SUPERFAMILY SSF140931 42 203 3.27E-35 T 15-10-2018 IPR036597 Fido-like domain superfamily AM378_22785 b367807fcacd8a8b32bbeba07ec330ce 334 Gene3D G3DSA:3.40.50.2300 62 154 4.7E-25 T 15-10-2018 AM378_22785 b367807fcacd8a8b32bbeba07ec330ce 334 Gene3D G3DSA:3.40.50.2300 155 334 4.9E-30 T 15-10-2018 AM378_22785 b367807fcacd8a8b32bbeba07ec330ce 334 Pfam PF00356 Bacterial regulatory proteins, lacI family 2 50 4.9E-19 T 15-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM378_22785 b367807fcacd8a8b32bbeba07ec330ce 334 Gene3D G3DSA:1.10.260.40 1 61 1.7E-28 T 15-10-2018 AM378_22785 b367807fcacd8a8b32bbeba07ec330ce 334 TIGRFAM TIGR02417 fruct_sucro_rep: D-fructose-responsive transcription factor 2 328 3.4E-150 T 15-10-2018 IPR012781 D-fructose-responsive transcription factor GO:0003677|GO:0006355|GO:0009750 AM378_22785 b367807fcacd8a8b32bbeba07ec330ce 334 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 62 311 3.4E-15 T 15-10-2018 IPR001761 Periplasmic binding protein/LacI sugar binding domain AM378_22785 b367807fcacd8a8b32bbeba07ec330ce 334 SUPERFAMILY SSF53822 60 314 1.75E-41 T 15-10-2018 IPR028082 Periplasmic binding protein-like I AM378_22785 b367807fcacd8a8b32bbeba07ec330ce 334 SMART SM00354 1 73 7.4E-32 T 15-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM378_22785 b367807fcacd8a8b32bbeba07ec330ce 334 SUPERFAMILY SSF47413 2 58 8.7E-16 T 15-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AM378_22785 b367807fcacd8a8b32bbeba07ec330ce 334 ProSitePatterns PS00356 LacI-type HTH domain signature. 3 21 - T 15-10-2018 AM378_06600 1c067b804b3cb633654038aa2e1c2409 399 Pfam PF00083 Sugar (and other) transporter 249 380 7.1E-6 T 15-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 AM378_06600 1c067b804b3cb633654038aa2e1c2409 399 Gene3D G3DSA:1.20.1250.20 3 208 8.7E-45 T 15-10-2018 AM378_06600 1c067b804b3cb633654038aa2e1c2409 399 SUPERFAMILY SSF103473 6 196 5.49E-42 T 15-10-2018 IPR036259 MFS transporter superfamily AM378_06600 1c067b804b3cb633654038aa2e1c2409 399 PRINTS PR01035 Tetracycline resistance protein signature 17 33 4.0E-12 T 15-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AM378_06600 1c067b804b3cb633654038aa2e1c2409 399 PRINTS PR01035 Tetracycline resistance protein signature 79 103 4.0E-12 T 15-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AM378_06600 1c067b804b3cb633654038aa2e1c2409 399 PRINTS PR01035 Tetracycline resistance protein signature 136 158 4.0E-12 T 15-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AM378_06600 1c067b804b3cb633654038aa2e1c2409 399 PRINTS PR01035 Tetracycline resistance protein signature 340 363 4.0E-12 T 15-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AM378_06600 1c067b804b3cb633654038aa2e1c2409 399 PRINTS PR01035 Tetracycline resistance protein signature 106 127 4.0E-12 T 15-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AM378_06600 1c067b804b3cb633654038aa2e1c2409 399 Gene3D G3DSA:1.20.1250.20 210 393 1.7E-27 T 15-10-2018 AM378_06600 1c067b804b3cb633654038aa2e1c2409 399 SUPERFAMILY SSF103473 209 390 8.63E-30 T 15-10-2018 IPR036259 MFS transporter superfamily AM378_06600 1c067b804b3cb633654038aa2e1c2409 399 Pfam PF07690 Major Facilitator Superfamily 11 242 9.3E-32 T 15-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM378_14725 94937be15488d23807f58e0251b32370 707 Gene3D G3DSA:1.20.1560.10 162 445 4.6E-23 T 15-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 AM378_14725 94937be15488d23807f58e0251b32370 707 SMART SM00382 502 689 7.2E-17 T 15-10-2018 IPR003593 AAA+ ATPase domain AM378_14725 94937be15488d23807f58e0251b32370 707 Pfam PF00005 ABC transporter 493 641 9.0E-27 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM378_14725 94937be15488d23807f58e0251b32370 707 Gene3D G3DSA:3.40.50.300 470 706 1.1E-62 T 15-10-2018 AM378_14725 94937be15488d23807f58e0251b32370 707 Gene3D G3DSA:3.90.70.10 16 136 1.9E-22 T 15-10-2018 AM378_14725 94937be15488d23807f58e0251b32370 707 SUPERFAMILY SSF90123 166 454 2.88E-29 T 15-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 AM378_14725 94937be15488d23807f58e0251b32370 707 Pfam PF03412 Peptidase C39 family 9 132 1.3E-19 T 15-10-2018 IPR005074 Peptidase C39, bacteriocin processing GO:0005524|GO:0006508|GO:0008233|GO:0016021 AM378_14725 94937be15488d23807f58e0251b32370 707 Pfam PF00664 ABC transporter transmembrane region 171 429 3.7E-12 T 15-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 AM378_14725 94937be15488d23807f58e0251b32370 707 ProSitePatterns PS00211 ABC transporters family signature. 613 627 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM378_14725 94937be15488d23807f58e0251b32370 707 SUPERFAMILY SSF52540 472 701 5.98E-52 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_03240 f70d05cb25e881267ad88544de44ba47 375 Hamap MF_01012 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC [rlmC]. 1 375 80.46 T 15-10-2018 IPR011825 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC GO:0016070|GO:0016436 AM378_03240 f70d05cb25e881267ad88544de44ba47 375 Gene3D G3DSA:3.40.1350.30 56 211 1.3E-73 T 15-10-2018 AM378_03240 f70d05cb25e881267ad88544de44ba47 375 SUPERFAMILY SSF53335 3 374 1.09E-52 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM378_03240 f70d05cb25e881267ad88544de44ba47 375 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 357 367 - T 15-10-2018 IPR030391 RNA methyltransferase TrmA, conserved site AM378_03240 f70d05cb25e881267ad88544de44ba47 375 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 208 374 1.9E-15 T 15-10-2018 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 AM378_03240 f70d05cb25e881267ad88544de44ba47 375 Gene3D G3DSA:3.40.50.150 14 368 1.3E-73 T 15-10-2018 AM378_03240 f70d05cb25e881267ad88544de44ba47 375 TIGRFAM TIGR02085 meth_trns_rumB: 23S rRNA (uracil-5-)-methyltransferase RumB 2 374 2.4E-208 T 15-10-2018 IPR011825 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC GO:0016070|GO:0016436 AM378_03240 f70d05cb25e881267ad88544de44ba47 375 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 307 338 - T 15-10-2018 IPR030390 RNA methyltransferase TrmA, active site AM378_13925 4ad5054ad20ecd7f5ab8fccb6c9dba8e 460 Gene3D G3DSA:1.20.1720.10 8 218 1.9E-42 T 15-10-2018 AM378_13925 4ad5054ad20ecd7f5ab8fccb6c9dba8e 460 ProSitePatterns PS00217 Sugar transport proteins signature 2. 103 128 - T 15-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AM378_13925 4ad5054ad20ecd7f5ab8fccb6c9dba8e 460 Pfam PF07690 Major Facilitator Superfamily 12 402 2.3E-47 T 15-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM378_13925 4ad5054ad20ecd7f5ab8fccb6c9dba8e 460 Gene3D G3DSA:1.20.1250.20 253 451 4.7E-15 T 15-10-2018 AM378_13925 4ad5054ad20ecd7f5ab8fccb6c9dba8e 460 SUPERFAMILY SSF103473 3 449 9.81E-59 T 15-10-2018 IPR036259 MFS transporter superfamily AM378_05475 d24962f190cd3b579d8a8e153341484f 445 Gene3D G3DSA:1.10.760.10 2 135 4.6E-11 T 15-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM378_05475 d24962f190cd3b579d8a8e153341484f 445 PRINTS PR00605 Class IC cytochrome C signature 378 400 2.3E-5 T 15-10-2018 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 AM378_05475 d24962f190cd3b579d8a8e153341484f 445 PRINTS PR00605 Class IC cytochrome C signature 325 336 2.3E-5 T 15-10-2018 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 AM378_05475 d24962f190cd3b579d8a8e153341484f 445 SUPERFAMILY SSF46626 318 421 1.72E-24 T 15-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM378_05475 d24962f190cd3b579d8a8e153341484f 445 Gene3D G3DSA:1.10.760.10 299 430 1.9E-35 T 15-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM378_05475 d24962f190cd3b579d8a8e153341484f 445 Pfam PF00034 Cytochrome c 30 129 9.5E-6 T 15-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM378_05475 d24962f190cd3b579d8a8e153341484f 445 PIRSF PIRSF000018 1 440 3.5E-173 T 15-10-2018 IPR014353 Membrane-bound alcohol dehydrogenase, cytochrome c subunit GO:0005506|GO:0016020|GO:0016614|GO:0020037 AM378_05475 d24962f190cd3b579d8a8e153341484f 445 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 316 400 7.1E-11 T 15-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM378_05475 d24962f190cd3b579d8a8e153341484f 445 Gene3D G3DSA:1.10.760.10 159 298 3.3E-7 T 15-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM378_05475 d24962f190cd3b579d8a8e153341484f 445 SUPERFAMILY SSF46626 18 153 1.01E-21 T 15-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM378_05475 d24962f190cd3b579d8a8e153341484f 445 SUPERFAMILY SSF46626 178 295 9.18E-17 T 15-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM378_22870 4fa706d4eee853b96b7fbecb7dae950a 305 Hamap MF_00388 UDP-3-O-acyl-N-acetylglucosamine deacetylase [lpxC]. 2 280 46.291 T 15-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 AM378_22870 4fa706d4eee853b96b7fbecb7dae950a 305 Gene3D G3DSA:3.30.1700.10 129 305 1.1E-75 T 15-10-2018 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 AM378_22870 4fa706d4eee853b96b7fbecb7dae950a 305 SUPERFAMILY SSF54211 3 124 3.49E-41 T 15-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AM378_22870 4fa706d4eee853b96b7fbecb7dae950a 305 Gene3D G3DSA:3.30.230.20 1 128 2.2E-51 T 15-10-2018 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 AM378_22870 4fa706d4eee853b96b7fbecb7dae950a 305 SUPERFAMILY SSF54211 134 278 1.06E-54 T 15-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AM378_22870 4fa706d4eee853b96b7fbecb7dae950a 305 TIGRFAM TIGR00325 lpxC: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 2 301 8.0E-158 T 15-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 AM378_22870 4fa706d4eee853b96b7fbecb7dae950a 305 Pfam PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase 4 276 5.5E-109 T 15-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 AM378_12505 4913c506ae6b3e1a32df7f96bd3b0165 427 Gene3D G3DSA:2.60.40.10 12 164 3.3E-51 T 15-10-2018 IPR013783 Immunoglobulin-like fold AM378_12505 4913c506ae6b3e1a32df7f96bd3b0165 427 Pfam PF00756 Putative esterase 198 423 1.9E-34 T 15-10-2018 IPR000801 Putative esterase Reactome: R-HSA-156590 AM378_12505 4913c506ae6b3e1a32df7f96bd3b0165 427 Gene3D G3DSA:3.40.50.1820 165 426 1.5E-65 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold AM378_12505 4913c506ae6b3e1a32df7f96bd3b0165 427 SUPERFAMILY SSF53474 185 424 2.91E-47 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold AM378_12505 4913c506ae6b3e1a32df7f96bd3b0165 427 Pfam PF11806 Domain of unknown function (DUF3327) 45 175 4.9E-44 T 15-10-2018 IPR021764 Enterochelin esterase, N-terminal GO:0005506|GO:0005737|GO:0006826|GO:0008849 AM378_12505 4913c506ae6b3e1a32df7f96bd3b0165 427 SUPERFAMILY SSF81296 19 170 2.1E-41 T 15-10-2018 IPR014756 Immunoglobulin E-set AM378_13400 a2d6d1fff6251e3dcbdfdaf0bc88d613 164 SUPERFAMILY SSF46785 2 133 5.93E-37 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM378_13400 a2d6d1fff6251e3dcbdfdaf0bc88d613 164 TIGRFAM TIGR02010 IscR: iron-sulfur cluster assembly transcription factor IscR 1 134 4.1E-67 T 15-10-2018 IPR010242 Transcription factor HTH, IscR GO:0003690|GO:0003700|GO:0006355 AM378_13400 a2d6d1fff6251e3dcbdfdaf0bc88d613 164 Gene3D G3DSA:1.10.10.10 1 144 2.8E-56 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_13400 a2d6d1fff6251e3dcbdfdaf0bc88d613 164 Pfam PF02082 Transcriptional regulator 1 83 1.3E-27 T 15-10-2018 IPR000944 Transcription regulator Rrf2-type AM378_13400 a2d6d1fff6251e3dcbdfdaf0bc88d613 164 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 131 1.9E-47 T 15-10-2018 IPR000944 Transcription regulator Rrf2-type AM378_13400 a2d6d1fff6251e3dcbdfdaf0bc88d613 164 Hamap MF_01176 HTH-type transcriptional regulator IscR [iscR]. 1 164 50.735 T 15-10-2018 IPR010242 Transcription factor HTH, IscR GO:0003690|GO:0003700|GO:0006355 AM378_13400 a2d6d1fff6251e3dcbdfdaf0bc88d613 164 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 49 67 - T 15-10-2018 IPR030489 Transcription regulator Rrf2-type, conserved site AM378_12260 f6e356e840d7b24f97c4a800a1f84924 309 Pfam PF03466 LysR substrate binding domain 101 303 2.8E-25 T 15-10-2018 IPR005119 LysR, substrate-binding AM378_12260 f6e356e840d7b24f97c4a800a1f84924 309 Gene3D G3DSA:1.10.10.10 17 104 2.0E-20 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_12260 f6e356e840d7b24f97c4a800a1f84924 309 Gene3D G3DSA:3.40.190.10 174 276 8.4E-41 T 15-10-2018 AM378_12260 f6e356e840d7b24f97c4a800a1f84924 309 TIGRFAM TIGR02036 dsdC: D-serine deaminase transcriptional activator 14 303 2.4E-116 T 15-10-2018 IPR011781 D-serine deaminase transcriptional activator AM378_12260 f6e356e840d7b24f97c4a800a1f84924 309 SUPERFAMILY SSF46785 17 93 4.46E-19 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM378_12260 f6e356e840d7b24f97c4a800a1f84924 309 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 20 78 5.0E-19 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_12260 f6e356e840d7b24f97c4a800a1f84924 309 Gene3D G3DSA:3.40.190.10 114 302 8.4E-41 T 15-10-2018 AM378_12260 f6e356e840d7b24f97c4a800a1f84924 309 SUPERFAMILY SSF53850 102 306 1.07E-28 T 15-10-2018 AM378_00730 7c65ef3bbc17f6fe592269d8deb6b8df 153 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 74 123 1.9E-4 T 15-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain AM378_00730 7c65ef3bbc17f6fe592269d8deb6b8df 153 Gene3D G3DSA:3.40.140.10 56 149 4.5E-5 T 15-10-2018 AM378_00730 7c65ef3bbc17f6fe592269d8deb6b8df 153 SUPERFAMILY SSF53927 71 138 1.26E-6 T 15-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 AM378_00730 7c65ef3bbc17f6fe592269d8deb6b8df 153 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 77 120 - T 15-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 AM378_18915 f362aee251ec6acf6d2753d877e4eeda 364 Gene3D G3DSA:3.40.50.2000 188 360 6.4E-34 T 15-10-2018 AM378_18915 f362aee251ec6acf6d2753d877e4eeda 364 Gene3D G3DSA:3.40.50.2000 32 185 2.4E-24 T 15-10-2018 AM378_18915 f362aee251ec6acf6d2753d877e4eeda 364 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 103 321 4.2E-22 T 15-10-2018 IPR002201 Glycosyl transferase, family 9 GO:0016757 AM378_18915 f362aee251ec6acf6d2753d877e4eeda 364 SUPERFAMILY SSF53756 38 358 4.71E-62 T 15-10-2018 AM378_22980 f5216e991d5c67be5891bcf1ad2a9abf 505 Gene3D G3DSA:1.10.3410.10 260 390 6.6E-21 T 15-10-2018 IPR023293 Deoxyguanosinetriphosphate triphosphohydrolase, central domain superfamily KEGG: 00230+3.1.5.1 AM378_22980 f5216e991d5c67be5891bcf1ad2a9abf 505 Hamap MF_00030 Deoxyguanosinetriphosphate triphosphohydrolase [dgt]. 1 505 52.302 T 15-10-2018 IPR020779 dNTP triphosphohydrolase, type 1 GO:0000287|GO:0006203|GO:0008832 KEGG: 00230+3.1.5.1 AM378_22980 f5216e991d5c67be5891bcf1ad2a9abf 505 Gene3D G3DSA:1.10.3210.10 155 257 1.3E-14 T 15-10-2018 AM378_22980 f5216e991d5c67be5891bcf1ad2a9abf 505 TIGRFAM TIGR01353 dGTP_triPase: putative dGTPase 30 503 3.1E-123 T 15-10-2018 IPR006261 dNTP triphosphohydrolase GO:0016793 AM378_22980 f5216e991d5c67be5891bcf1ad2a9abf 505 SMART SM00471 62 282 3.1E-10 T 15-10-2018 IPR003607 HD/PDEase domain AM378_22980 f5216e991d5c67be5891bcf1ad2a9abf 505 SUPERFAMILY SSF109604 24 502 3.14E-63 T 15-10-2018 AM378_22980 f5216e991d5c67be5891bcf1ad2a9abf 505 Gene3D G3DSA:1.10.3210.10 7 154 1.3E-44 T 15-10-2018 AM378_22980 f5216e991d5c67be5891bcf1ad2a9abf 505 Pfam PF13286 Phosphohydrolase-associated domain 431 500 2.4E-5 T 15-10-2018 IPR026875 Phosphohydrolase-associated domain AM378_22980 f5216e991d5c67be5891bcf1ad2a9abf 505 Pfam PF01966 HD domain 66 132 1.4E-9 T 15-10-2018 IPR006674 HD domain AM378_13645 733f1830982fb43b4dd72fa98dbc974e 440 Gene3D G3DSA:3.40.50.300 219 388 3.0E-50 T 15-10-2018 AM378_13645 733f1830982fb43b4dd72fa98dbc974e 440 Gene3D G3DSA:3.40.50.300 1 212 2.6E-71 T 15-10-2018 AM378_13645 733f1830982fb43b4dd72fa98dbc974e 440 Pfam PF00270 DEAD/DEAH box helicase 28 196 1.2E-45 T 15-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AM378_13645 733f1830982fb43b4dd72fa98dbc974e 440 SMART SM00490 262 343 6.0E-29 T 15-10-2018 IPR001650 Helicase, C-terminal AM378_13645 733f1830982fb43b4dd72fa98dbc974e 440 SUPERFAMILY SSF52540 35 354 3.66E-66 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_13645 733f1830982fb43b4dd72fa98dbc974e 440 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 155 163 - T 15-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site AM378_13645 733f1830982fb43b4dd72fa98dbc974e 440 Pfam PF00271 Helicase conserved C-terminal domain 235 343 1.0E-27 T 15-10-2018 IPR001650 Helicase, C-terminal AM378_13645 733f1830982fb43b4dd72fa98dbc974e 440 Hamap MF_00967 ATP-dependent RNA helicase SrmB [srmB]. 4 427 49.552 T 15-10-2018 IPR028621 ATP-dependent RNA helicase SrmB GO:0000027|GO:0004004 AM378_13645 733f1830982fb43b4dd72fa98dbc974e 440 SMART SM00487 23 223 1.0E-57 T 15-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AM378_07590 9d353c8f5bf4890ea0515d51692e86df 301 Pfam PF00561 alpha/beta hydrolase fold 29 156 2.5E-18 T 15-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AM378_07590 9d353c8f5bf4890ea0515d51692e86df 301 SUPERFAMILY SSF53474 10 297 5.4E-62 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold AM378_07590 9d353c8f5bf4890ea0515d51692e86df 301 Gene3D G3DSA:3.40.50.1820 9 299 5.7E-62 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold AM378_23860 a9faafd50fbe44082d53eccd8972f904 299 Pfam PF14525 AraC-binding-like domain 32 182 2.5E-21 T 15-10-2018 IPR035418 Transcription regulator HTH, AraC- type, ligand binding domain-like AM378_23860 a9faafd50fbe44082d53eccd8972f904 299 Pfam PF12833 Helix-turn-helix domain 217 297 4.0E-23 T 15-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM378_23860 a9faafd50fbe44082d53eccd8972f904 299 SUPERFAMILY SSF46689 246 298 8.06E-11 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AM378_23860 a9faafd50fbe44082d53eccd8972f904 299 SMART SM00342 211 295 3.1E-28 T 15-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM378_23860 a9faafd50fbe44082d53eccd8972f904 299 Gene3D G3DSA:1.10.10.60 191 299 3.5E-28 T 15-10-2018 AM378_23860 a9faafd50fbe44082d53eccd8972f904 299 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 279 295 2.5E-6 T 15-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM378_23860 a9faafd50fbe44082d53eccd8972f904 299 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 264 279 2.5E-6 T 15-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM378_04310 3d1dc980990393ce1af62aac6364c6ec 319 Gene3D G3DSA:3.10.290.10 8 72 3.2E-15 T 15-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 AM378_04310 3d1dc980990393ce1af62aac6364c6ec 319 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 16 314 1.3E-94 T 15-10-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM378_04310 3d1dc980990393ce1af62aac6364c6ec 319 SUPERFAMILY SSF55120 95 314 1.04E-64 T 15-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM378_04310 3d1dc980990393ce1af62aac6364c6ec 319 SMART SM00363 20 79 8.6E-7 T 15-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM378_04310 3d1dc980990393ce1af62aac6364c6ec 319 Pfam PF00849 RNA pseudouridylate synthase 101 248 1.0E-28 T 15-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM378_04310 3d1dc980990393ce1af62aac6364c6ec 319 SUPERFAMILY SSF55174 19 70 4.21E-8 T 15-10-2018 AM378_04310 3d1dc980990393ce1af62aac6364c6ec 319 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 140 154 - T 15-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM378_04310 3d1dc980990393ce1af62aac6364c6ec 319 Gene3D G3DSA:3.30.2350.10 92 317 9.5E-86 T 15-10-2018 AM378_04310 3d1dc980990393ce1af62aac6364c6ec 319 Pfam PF01479 S4 domain 20 66 1.5E-8 T 15-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM378_04680 412a97d181f7e4ff34e6bae402176fc0 141 PIRSF PIRSF006276 1 141 6.7E-42 T 15-10-2018 IPR006015 Universal stress protein A AM378_04680 412a97d181f7e4ff34e6bae402176fc0 141 SUPERFAMILY SSF52402 3 138 3.01E-22 T 15-10-2018 AM378_04680 412a97d181f7e4ff34e6bae402176fc0 141 Pfam PF00582 Universal stress protein family 3 138 3.3E-14 T 15-10-2018 IPR006016 UspA AM378_04680 412a97d181f7e4ff34e6bae402176fc0 141 Gene3D G3DSA:3.40.50.620 2 141 7.2E-34 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM378_09030 e807cdc294a733e323fec9b5977fb1d0 344 Gene3D G3DSA:2.40.40.20 273 339 1.9E-6 T 15-10-2018 AM378_09030 e807cdc294a733e323fec9b5977fb1d0 344 Gene3D G3DSA:3.40.630.30 1 272 6.8E-122 T 15-10-2018 AM378_09030 e807cdc294a733e323fec9b5977fb1d0 344 Pfam PF04958 Arginine N-succinyltransferase beta subunit 1 337 3.3E-145 T 15-10-2018 IPR007041 Arginine N-succinyltransferase AstA/AruG GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109 AM378_09030 e807cdc294a733e323fec9b5977fb1d0 344 Hamap MF_01171 Arginine N-succinyltransferase [astA]. 1 344 73.521 T 15-10-2018 IPR007041 Arginine N-succinyltransferase AstA/AruG GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109 AM378_09030 e807cdc294a733e323fec9b5977fb1d0 344 SUPERFAMILY SSF55729 1 338 3.86E-135 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase AM378_09030 e807cdc294a733e323fec9b5977fb1d0 344 TIGRFAM TIGR03243 arg_catab_AOST: arginine and ornithine succinyltransferase subunits 3 338 8.5E-148 T 15-10-2018 IPR007041 Arginine N-succinyltransferase AstA/AruG GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109 AM378_09030 e807cdc294a733e323fec9b5977fb1d0 344 TIGRFAM TIGR03244 arg_catab_AstA: arginine N-succinyltransferase 3 338 3.3E-158 T 15-10-2018 IPR017650 Arginine N-succinyltransferase GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109 AM378_13910 5cde9d99e7721dbe988ddaa3963c4045 112 Gene3D G3DSA:3.90.1150.40 1 112 5.9E-56 T 15-10-2018 AM378_13910 5cde9d99e7721dbe988ddaa3963c4045 112 Pfam PF09400 Protein of unknown function (DUF2002) 1 111 6.4E-59 T 15-10-2018 IPR018994 Protein of unknown function DUF2002 AM378_13910 5cde9d99e7721dbe988ddaa3963c4045 112 SUPERFAMILY SSF159894 1 111 3.92E-55 T 15-10-2018 AM378_02335 05dc14ebc1105b0c93e3c3b2c1a15a7f 473 TIGRFAM TIGR01386 cztS_silS_copS: heavy metal sensor kinase 9 457 3.8E-144 T 15-10-2018 IPR006290 Heavy metal sensor kinase GO:0000160|GO:0004673|GO:0016020 AM378_02335 05dc14ebc1105b0c93e3c3b2c1a15a7f 473 SUPERFAMILY SSF47384 231 312 1.18E-15 T 15-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AM378_02335 05dc14ebc1105b0c93e3c3b2c1a15a7f 473 Pfam PF00672 HAMP domain 194 243 7.4E-8 T 15-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AM378_02335 05dc14ebc1105b0c93e3c3b2c1a15a7f 473 PRINTS PR00344 Bacterial sensor protein C-terminal signature 429 447 3.9E-5 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM378_02335 05dc14ebc1105b0c93e3c3b2c1a15a7f 473 PRINTS PR00344 Bacterial sensor protein C-terminal signature 412 422 3.9E-5 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM378_02335 05dc14ebc1105b0c93e3c3b2c1a15a7f 473 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 358 464 3.0E-16 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AM378_02335 05dc14ebc1105b0c93e3c3b2c1a15a7f 473 Pfam PF00512 His Kinase A (phospho-acceptor) domain 249 313 3.7E-11 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM378_02335 05dc14ebc1105b0c93e3c3b2c1a15a7f 473 SMART SM00388 248 314 1.1E-14 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM378_02335 05dc14ebc1105b0c93e3c3b2c1a15a7f 473 Gene3D G3DSA:3.30.565.10 322 472 5.7E-28 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AM378_02335 05dc14ebc1105b0c93e3c3b2c1a15a7f 473 SMART SM00304 194 247 1.3E-10 T 15-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AM378_02335 05dc14ebc1105b0c93e3c3b2c1a15a7f 473 Gene3D G3DSA:1.10.287.130 198 315 4.5E-22 T 15-10-2018 AM378_02335 05dc14ebc1105b0c93e3c3b2c1a15a7f 473 SMART SM00387 357 472 8.0E-30 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AM378_02335 05dc14ebc1105b0c93e3c3b2c1a15a7f 473 SUPERFAMILY SSF55874 319 469 1.17E-30 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AM378_02335 05dc14ebc1105b0c93e3c3b2c1a15a7f 473 SUPERFAMILY SSF158472 195 244 4.58E-7 T 15-10-2018 AM378_19875 3b5d99f59afb16f97dfa87f556863ea1 563 Gene3D G3DSA:2.60.40.10 7 130 5.5E-47 T 15-10-2018 IPR013783 Immunoglobulin-like fold AM378_19875 3b5d99f59afb16f97dfa87f556863ea1 563 SUPERFAMILY SSF51445 134 560 9.32E-100 T 15-10-2018 IPR017853 Glycoside hydrolase superfamily AM378_19875 3b5d99f59afb16f97dfa87f556863ea1 563 SUPERFAMILY SSF81296 24 132 1.15E-39 T 15-10-2018 IPR014756 Immunoglobulin E-set AM378_19875 3b5d99f59afb16f97dfa87f556863ea1 563 Pfam PF08329 Chitinase A, N-terminal domain 23 155 7.3E-61 T 15-10-2018 IPR013540 Chitinase A N-terminal GO:0004568|GO:0006032 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 AM378_19875 3b5d99f59afb16f97dfa87f556863ea1 563 Gene3D G3DSA:3.10.50.10 443 518 8.4E-173 T 15-10-2018 IPR029070 Chitinase insertion domain superfamily AM378_19875 3b5d99f59afb16f97dfa87f556863ea1 563 ProSitePatterns PS01095 Chitinases family 18 active site. 307 315 - T 15-10-2018 IPR001579 Glycoside hydrolase, chitinase active site GO:0004553|GO:0005975 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 AM378_19875 3b5d99f59afb16f97dfa87f556863ea1 563 Gene3D G3DSA:3.20.20.80 158 550 8.4E-173 T 15-10-2018 AM378_19875 3b5d99f59afb16f97dfa87f556863ea1 563 SMART SM00089 61 133 8.9E-8 T 15-10-2018 IPR022409 PKD/Chitinase domain AM378_19875 3b5d99f59afb16f97dfa87f556863ea1 563 SUPERFAMILY SSF54556 444 516 7.61E-22 T 15-10-2018 IPR029070 Chitinase insertion domain superfamily AM378_19875 3b5d99f59afb16f97dfa87f556863ea1 563 SMART SM00636 158 544 2.1E-166 T 15-10-2018 IPR011583 Chitinase II GO:0008061 AM378_19875 3b5d99f59afb16f97dfa87f556863ea1 563 Pfam PF00704 Glycosyl hydrolases family 18 160 544 8.6E-89 T 15-10-2018 IPR001223 Glycoside hydrolase family 18, catalytic domain GO:0005975 AM378_03730 83fcc63c7fb1591f4cfd61ad14be15a7 150 Pfam PF03733 Inner membrane component domain 4 53 2.6E-10 T 15-10-2018 IPR005185 Inner membrane component domain AM378_03730 83fcc63c7fb1591f4cfd61ad14be15a7 150 Pfam PF03733 Inner membrane component domain 77 127 1.3E-17 T 15-10-2018 IPR005185 Inner membrane component domain AM378_03730 83fcc63c7fb1591f4cfd61ad14be15a7 150 PIRSF PIRSF028777 1 139 6.5E-54 T 15-10-2018 IPR031308 Uncharacterised conserved protein UCP028777 AM378_11900 b5a395719f1cb52935944fc70202a6f8 209 Pfam PF00043 Glutathione S-transferase, C-terminal domain 136 197 3.0E-13 T 15-10-2018 IPR004046 Glutathione S-transferase, C-terminal AM378_11900 b5a395719f1cb52935944fc70202a6f8 209 Gene3D G3DSA:3.40.30.10 4 88 1.8E-83 T 15-10-2018 AM378_11900 b5a395719f1cb52935944fc70202a6f8 209 Pfam PF02798 Glutathione S-transferase, N-terminal domain 4 81 7.0E-12 T 15-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AM378_11900 b5a395719f1cb52935944fc70202a6f8 209 Gene3D G3DSA:1.20.1050.10 89 198 1.8E-83 T 15-10-2018 AM378_11900 b5a395719f1cb52935944fc70202a6f8 209 SUPERFAMILY SSF52833 1 84 2.33E-21 T 15-10-2018 IPR036249 Thioredoxin-like superfamily AM378_11900 b5a395719f1cb52935944fc70202a6f8 209 SUPERFAMILY SSF47616 78 205 9.28E-38 T 15-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily AM378_17910 af02ff5ed762db652a3693204a54a7af 101 Pfam PF13591 MerR HTH family regulatory protein 8 92 2.0E-24 T 15-10-2018 AM378_17910 af02ff5ed762db652a3693204a54a7af 101 Gene3D G3DSA:1.10.1660.10 2 100 3.5E-29 T 15-10-2018 AM378_01310 ddd1f66d2915f5d2fd1866bde7761f9e 345 TIGRFAM TIGR00433 bioB: biotin synthase 14 310 4.3E-125 T 15-10-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 AM378_01310 ddd1f66d2915f5d2fd1866bde7761f9e 345 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 220 310 1.7E-20 T 15-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 AM378_01310 ddd1f66d2915f5d2fd1866bde7761f9e 345 SUPERFAMILY SSF102114 5 313 2.49E-95 T 15-10-2018 AM378_01310 ddd1f66d2915f5d2fd1866bde7761f9e 345 Gene3D G3DSA:3.20.20.70 4 315 3.4E-135 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM378_01310 ddd1f66d2915f5d2fd1866bde7761f9e 345 Pfam PF04055 Radical SAM superfamily 50 202 3.9E-18 T 15-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AM378_01310 ddd1f66d2915f5d2fd1866bde7761f9e 345 Hamap MF_01694 Biotin synthase [bioB]. 5 313 41.463 T 15-10-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 AM378_01310 ddd1f66d2915f5d2fd1866bde7761f9e 345 PIRSF PIRSF001619 1 319 3.3E-139 T 15-10-2018 IPR024177 Biotin synthase KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 AM378_01310 ddd1f66d2915f5d2fd1866bde7761f9e 345 SMART SM00729 43 255 2.0E-39 T 15-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 AM378_01310 ddd1f66d2915f5d2fd1866bde7761f9e 345 SMART SM00876 220 312 2.5E-49 T 15-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 AM378_22600 b9d16a3067b20266296dc3a9f0f7fa99 185 Gene3D G3DSA:3.40.50.360 1 174 1.2E-55 T 15-10-2018 IPR029039 Flavoprotein-like superfamily AM378_22600 b9d16a3067b20266296dc3a9f0f7fa99 185 SUPERFAMILY SSF52218 2 170 1.37E-47 T 15-10-2018 IPR029039 Flavoprotein-like superfamily AM378_22600 b9d16a3067b20266296dc3a9f0f7fa99 185 Hamap MF_01414 Glutathione-regulated potassium-efflux system ancillary protein KefF [kefF]. 1 173 54.004 T 15-10-2018 IPR023948 Glutathione-regulated potassium-efflux system ancillary protein KefF GO:0006813 KEGG: 00130+1.6.5.2|MetaCyc: PWY-7731 AM378_22600 b9d16a3067b20266296dc3a9f0f7fa99 185 Pfam PF02525 Flavodoxin-like fold 2 166 6.7E-40 T 15-10-2018 IPR003680 Flavodoxin-like fold AM378_03255 32b754f825cb61b72a73bdababbc9f32 244 TIGRFAM TIGR01096 3A0103s03R: lysine-arginine-ornithine-binding periplasmic protein 5 242 3.7E-87 T 15-10-2018 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter GO:0030288|GO:0071705 AM378_03255 32b754f825cb61b72a73bdababbc9f32 244 Gene3D G3DSA:3.40.190.10 27 241 1.9E-83 T 15-10-2018 AM378_03255 32b754f825cb61b72a73bdababbc9f32 244 SUPERFAMILY SSF53850 1 243 3.52E-71 T 15-10-2018 AM378_03255 32b754f825cb61b72a73bdababbc9f32 244 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 46 59 - T 15-10-2018 IPR018313 Solute-binding protein family 3, conserved site AM378_03255 32b754f825cb61b72a73bdababbc9f32 244 SMART SM00062 23 243 5.2E-86 T 15-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AM378_03255 32b754f825cb61b72a73bdababbc9f32 244 SMART SM00079 23 244 0.0022 T 15-10-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 AM378_03255 32b754f825cb61b72a73bdababbc9f32 244 Gene3D G3DSA:3.40.190.10 109 202 1.9E-83 T 15-10-2018 AM378_03255 32b754f825cb61b72a73bdababbc9f32 244 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 24 243 1.2E-70 T 15-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AM378_05320 19be78ecfdda685f657ac5e4866b70a5 478 Hamap MF_01579 Ribosomal RNA small subunit methyltransferase F [rsmF]. 7 475 62.931 T 15-10-2018 IPR023545 rRNA small subunit methyltransferase F GO:0008649 AM378_05320 19be78ecfdda685f657ac5e4866b70a5 478 Gene3D G3DSA:3.40.50.150 3 310 1.6E-100 T 15-10-2018 AM378_05320 19be78ecfdda685f657ac5e4866b70a5 478 Pfam PF13636 RNA-binding PUA-like domain of methyltransferase RsmF 421 470 6.7E-11 T 15-10-2018 IPR027391 rRNA small subunit methyltransferase F, RNA-binding PUA-like domain AM378_05320 19be78ecfdda685f657ac5e4866b70a5 478 Pfam PF01189 16S rRNA methyltransferase RsmB/F 120 309 1.3E-49 T 15-10-2018 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 AM378_05320 19be78ecfdda685f657ac5e4866b70a5 478 TIGRFAM TIGR00446 nop2p: NOL1/NOP2/sun family putative RNA methylase 42 310 8.3E-104 T 15-10-2018 IPR011023 Nop2p GO:0003723|GO:0006364|GO:0008757 Reactome: R-HSA-6790901|Reactome: R-HSA-8869496 AM378_05320 19be78ecfdda685f657ac5e4866b70a5 478 ProSitePatterns PS01153 NOL1/NOP2/sun family signature. 188 199 - T 15-10-2018 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site GO:0003723|GO:0008168 AM378_05320 19be78ecfdda685f657ac5e4866b70a5 478 Pfam PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF 9 105 1.4E-27 T 15-10-2018 IPR031341 Ribosomal RNA small subunit methyltransferase F, N-terminal Reactome: R-HSA-6790901|Reactome: R-HSA-8869496 AM378_05320 19be78ecfdda685f657ac5e4866b70a5 478 Gene3D G3DSA:2.30.130.90 311 476 4.9E-64 T 15-10-2018 AM378_05320 19be78ecfdda685f657ac5e4866b70a5 478 SUPERFAMILY SSF53335 10 311 8.98E-68 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM378_05320 19be78ecfdda685f657ac5e4866b70a5 478 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 239 255 5.4E-28 T 15-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase AM378_05320 19be78ecfdda685f657ac5e4866b70a5 478 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 189 201 5.4E-28 T 15-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase AM378_05320 19be78ecfdda685f657ac5e4866b70a5 478 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 91 105 5.4E-28 T 15-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase AM378_05320 19be78ecfdda685f657ac5e4866b70a5 478 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 122 132 5.4E-28 T 15-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase AM378_05320 19be78ecfdda685f657ac5e4866b70a5 478 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 293 310 5.4E-28 T 15-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase AM378_11175 87bea699b33446ca461c2d671a853dc7 289 SUPERFAMILY SSF51658 17 279 5.63E-51 T 15-10-2018 IPR036237 Xylose isomerase-like superfamily AM378_11175 87bea699b33446ca461c2d671a853dc7 289 Gene3D G3DSA:3.20.20.150 1 288 5.3E-71 T 15-10-2018 AM378_11175 87bea699b33446ca461c2d671a853dc7 289 Pfam PF01261 Xylose isomerase-like TIM barrel 27 237 9.5E-33 T 15-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain AM378_11175 87bea699b33446ca461c2d671a853dc7 289 TIGRFAM TIGR00542 hxl6Piso_put: putative hexulose-6-phosphate isomerase 8 288 3.9E-119 T 15-10-2018 IPR004560 L-ribulose-5-phosphate 3-epimerase GO:0005975|GO:0016861 KEGG: 00040+5.1.3.22|KEGG: 00053+5.1.3.22|MetaCyc: PWY-6961 AM378_10830 555c720fe3d6c943e0c2bb8750225e89 306 Gene3D G3DSA:3.20.20.60 1 295 3.0E-91 T 15-10-2018 AM378_10830 555c720fe3d6c943e0c2bb8750225e89 306 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 11 230 1.9E-80 T 15-10-2018 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 AM378_10830 555c720fe3d6c943e0c2bb8750225e89 306 PIRSF PIRSF015582 2 304 3.9E-78 T 15-10-2018 IPR011206 Citrate lyase beta subunit-like AM378_10830 555c720fe3d6c943e0c2bb8750225e89 306 TIGRFAM TIGR01588 citE: citrate (pro-3S)-lyase, beta subunit 8 294 1.2E-135 T 15-10-2018 IPR006475 Citrate lyase, beta subunit, bacteria GO:0005737|GO:0006084|GO:0008816|GO:0009346 KEGG: 00720+4.1.3.34|MetaCyc: PWY-5392|MetaCyc: PWY-6038 AM378_10830 555c720fe3d6c943e0c2bb8750225e89 306 SUPERFAMILY SSF51621 7 240 3.84E-62 T 15-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 AM378_02910 ad7c134ac2a7a0ed8dfc83769029672d 362 SUPERFAMILY SSF53383 6 349 1.33E-79 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM378_02910 ad7c134ac2a7a0ed8dfc83769029672d 362 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 8 349 9.5E-121 T 15-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 AM378_02910 ad7c134ac2a7a0ed8dfc83769029672d 362 Pfam PF00155 Aminotransferase class I and II 43 348 3.7E-61 T 15-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AM378_02910 ad7c134ac2a7a0ed8dfc83769029672d 362 Gene3D G3DSA:3.90.1150.10 6 344 3.9E-133 T 15-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AM378_02910 ad7c134ac2a7a0ed8dfc83769029672d 362 Gene3D G3DSA:3.40.640.10 51 255 3.9E-133 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AM378_02910 ad7c134ac2a7a0ed8dfc83769029672d 362 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 208 217 - T 15-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 AM378_02910 ad7c134ac2a7a0ed8dfc83769029672d 362 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 6 352 55.078 T 15-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 AM378_06460 c7f9e2f5ac8267bf801e180079dee122 304 SUPERFAMILY SSF46689 200 250 2.82E-7 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AM378_06460 c7f9e2f5ac8267bf801e180079dee122 304 Pfam PF12852 Cupin 2 181 3.3E-21 T 15-10-2018 IPR032783 AraC-type transcription regulator, ligand-binding domain AM378_06460 c7f9e2f5ac8267bf801e180079dee122 304 Pfam PF12833 Helix-turn-helix domain 222 298 2.5E-17 T 15-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM378_06460 c7f9e2f5ac8267bf801e180079dee122 304 Gene3D G3DSA:1.10.10.60 197 303 1.6E-22 T 15-10-2018 AM378_06460 c7f9e2f5ac8267bf801e180079dee122 304 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 283 299 5.2E-6 T 15-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM378_06460 c7f9e2f5ac8267bf801e180079dee122 304 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 268 283 5.2E-6 T 15-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM378_06460 c7f9e2f5ac8267bf801e180079dee122 304 SUPERFAMILY SSF46689 252 301 6.72E-10 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AM378_06460 c7f9e2f5ac8267bf801e180079dee122 304 SMART SM00342 216 299 6.4E-24 T 15-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM378_15500 20770b1818670608f0f48827239c22fe 887 TIGRFAM TIGR00759 aceE: pyruvate dehydrogenase (acetyl-transferring), homodimeric type 5 886 0.0 T 15-10-2018 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 AM378_15500 20770b1818670608f0f48827239c22fe 887 SUPERFAMILY SSF52518 474 701 3.18E-98 T 15-10-2018 IPR029061 Thiamin diphosphate-binding fold AM378_15500 20770b1818670608f0f48827239c22fe 887 Gene3D G3DSA:3.40.50.970 472 706 4.6E-110 T 15-10-2018 AM378_15500 20770b1818670608f0f48827239c22fe 887 Gene3D G3DSA:3.40.50.970 57 471 1.4E-137 T 15-10-2018 AM378_15500 20770b1818670608f0f48827239c22fe 887 SUPERFAMILY SSF52518 58 469 1.3E-144 T 15-10-2018 IPR029061 Thiamin diphosphate-binding fold AM378_15500 20770b1818670608f0f48827239c22fe 887 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 361 446 3.1E-5 T 15-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 AM378_15500 20770b1818670608f0f48827239c22fe 887 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 117 294 1.6E-8 T 15-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 AM378_15500 20770b1818670608f0f48827239c22fe 887 PIRSF PIRSF000156 1 887 0.0 T 15-10-2018 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 AM378_15500 20770b1818670608f0f48827239c22fe 887 SUPERFAMILY SSF52922 702 885 1.04E-61 T 15-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 AM378_15500 20770b1818670608f0f48827239c22fe 887 Gene3D G3DSA:3.40.50.920 707 887 1.6E-73 T 15-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 AM378_20685 4e9abbe25f2a848003e991ce1ac29dcd 216 Hamap MF_00097 Thiamine-phosphate synthase [thiE]. 5 209 20.13 T 15-10-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 AM378_20685 4e9abbe25f2a848003e991ce1ac29dcd 216 SUPERFAMILY SSF51391 5 209 2.35E-65 T 15-10-2018 IPR036206 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 AM378_20685 4e9abbe25f2a848003e991ce1ac29dcd 216 TIGRFAM TIGR00693 thiE: thiamine-phosphate diphosphorylase 22 204 2.3E-55 T 15-10-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 AM378_20685 4e9abbe25f2a848003e991ce1ac29dcd 216 Gene3D G3DSA:3.20.20.70 8 211 7.7E-63 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM378_20685 4e9abbe25f2a848003e991ce1ac29dcd 216 Pfam PF02581 Thiamine monophosphate synthase 22 191 5.7E-56 T 15-10-2018 IPR022998 Thiamine phosphate synthase/TenI KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 AM378_10940 5faf95268bc0e6f0118c2b46447e4208 265 Gene3D G3DSA:3.10.180.10 26 128 7.1E-5 T 15-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AM378_10940 5faf95268bc0e6f0118c2b46447e4208 265 Gene3D G3DSA:3.10.180.10 142 264 6.8E-5 T 15-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AM378_10940 5faf95268bc0e6f0118c2b46447e4208 265 SUPERFAMILY SSF54593 44 126 1.2E-9 T 15-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AM378_10940 5faf95268bc0e6f0118c2b46447e4208 265 SUPERFAMILY SSF54593 182 263 5.35E-5 T 15-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AM378_22385 dd7ffc51d0108f5672de36fc8b65f8b9 331 Pfam PF00107 Zinc-binding dehydrogenase 154 283 4.7E-19 T 15-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AM378_22385 dd7ffc51d0108f5672de36fc8b65f8b9 331 Gene3D G3DSA:3.40.50.720 122 299 1.4E-109 T 15-10-2018 AM378_22385 dd7ffc51d0108f5672de36fc8b65f8b9 331 SUPERFAMILY SSF50129 2 139 1.24E-28 T 15-10-2018 IPR011032 GroES-like superfamily AM378_22385 dd7ffc51d0108f5672de36fc8b65f8b9 331 Gene3D G3DSA:3.90.180.10 19 327 1.4E-109 T 15-10-2018 AM378_22385 dd7ffc51d0108f5672de36fc8b65f8b9 331 SUPERFAMILY SSF51735 123 294 3.83E-45 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily AM378_22385 dd7ffc51d0108f5672de36fc8b65f8b9 331 SMART SM00829 14 328 3.6E-5 T 15-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AM378_22385 dd7ffc51d0108f5672de36fc8b65f8b9 331 Pfam PF16884 N-terminal domain of oxidoreductase 4 105 3.7E-23 T 15-10-2018 AM378_24175 b8760c0164dcbb8685383525c9b99280 418 Gene3D G3DSA:2.30.30.60 201 244 2.7E-5 T 15-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily AM378_24175 b8760c0164dcbb8685383525c9b99280 418 SUPERFAMILY SSF50182 187 252 2.88E-12 T 15-10-2018 IPR010920 LSM domain superfamily AM378_24175 b8760c0164dcbb8685383525c9b99280 418 Pfam PF00924 Mechanosensitive ion channel 143 397 1.8E-56 T 15-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 AM378_04935 f795501bec3bffd3156481418fbc2cfa 409 SUPERFAMILY SSF55031 208 320 5.02E-41 T 15-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain AM378_04935 f795501bec3bffd3156481418fbc2cfa 409 PIRSF PIRSF037215 1 408 1.6E-178 T 15-10-2018 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 AM378_04935 f795501bec3bffd3156481418fbc2cfa 409 SUPERFAMILY SSF53187 1 406 5.47E-80 T 15-10-2018 AM378_04935 f795501bec3bffd3156481418fbc2cfa 409 Gene3D G3DSA:3.40.630.10 4 400 1.6E-173 T 15-10-2018 AM378_04935 f795501bec3bffd3156481418fbc2cfa 409 Pfam PF07687 Peptidase dimerisation domain 206 303 1.4E-11 T 15-10-2018 IPR011650 Peptidase M20, dimerisation domain AM378_04935 f795501bec3bffd3156481418fbc2cfa 409 TIGRFAM TIGR01882 peptidase-T: peptidase T 2 408 2.6E-149 T 15-10-2018 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 AM378_04935 f795501bec3bffd3156481418fbc2cfa 409 Gene3D G3DSA:3.30.70.360 208 319 1.6E-173 T 15-10-2018 AM378_04935 f795501bec3bffd3156481418fbc2cfa 409 Pfam PF01546 Peptidase family M20/M25/M40 139 401 8.3E-16 T 15-10-2018 IPR002933 Peptidase M20 GO:0016787 AM378_04935 f795501bec3bffd3156481418fbc2cfa 409 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 73 82 - T 15-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 AM378_04935 f795501bec3bffd3156481418fbc2cfa 409 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 138 176 - T 15-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 AM378_04935 f795501bec3bffd3156481418fbc2cfa 409 Hamap MF_00550 Peptidase T [pepT]. 1 404 53.83 T 15-10-2018 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 AM378_01585 1f804adc033cb1df649804cf4273cbf7 507 SUPERFAMILY SSF52218 7 147 2.51E-37 T 15-10-2018 IPR029039 Flavoprotein-like superfamily AM378_01585 1f804adc033cb1df649804cf4273cbf7 507 Gene3D G3DSA:1.20.990.10 211 306 2.2E-30 T 15-10-2018 IPR023173 NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain superfamily GO:0016491|GO:0055114 AM378_01585 1f804adc033cb1df649804cf4273cbf7 507 SUPERFAMILY SSF63380 161 360 1.99E-35 T 15-10-2018 IPR017938 Riboflavin synthase-like beta-barrel AM378_01585 1f804adc033cb1df649804cf4273cbf7 507 Gene3D G3DSA:2.40.30.10 167 347 2.2E-30 T 15-10-2018 AM378_01585 1f804adc033cb1df649804cf4273cbf7 507 SUPERFAMILY SSF52343 361 507 1.57E-36 T 15-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AM378_01585 1f804adc033cb1df649804cf4273cbf7 507 Pfam PF00258 Flavodoxin 10 134 7.5E-24 T 15-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 AM378_01585 1f804adc033cb1df649804cf4273cbf7 507 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 201 211 3.3E-16 T 15-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AM378_01585 1f804adc033cb1df649804cf4273cbf7 507 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 373 392 3.3E-16 T 15-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AM378_01585 1f804adc033cb1df649804cf4273cbf7 507 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 411 422 3.3E-16 T 15-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AM378_01585 1f804adc033cb1df649804cf4273cbf7 507 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 465 473 3.3E-16 T 15-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AM378_01585 1f804adc033cb1df649804cf4273cbf7 507 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 339 348 3.3E-16 T 15-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AM378_01585 1f804adc033cb1df649804cf4273cbf7 507 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 398 407 3.3E-16 T 15-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AM378_01585 1f804adc033cb1df649804cf4273cbf7 507 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 308 315 3.3E-16 T 15-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AM378_01585 1f804adc033cb1df649804cf4273cbf7 507 Pfam PF00175 Oxidoreductase NAD-binding domain 374 477 4.9E-14 T 15-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 AM378_01585 1f804adc033cb1df649804cf4273cbf7 507 Gene3D G3DSA:3.40.50.80 362 507 2.6E-39 T 15-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AM378_01585 1f804adc033cb1df649804cf4273cbf7 507 Gene3D G3DSA:3.40.50.360 4 156 6.6E-37 T 15-10-2018 IPR029039 Flavoprotein-like superfamily AM378_01585 1f804adc033cb1df649804cf4273cbf7 507 PRINTS PR00369 Flavodoxin signature 9 22 3.0E-13 T 15-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 AM378_01585 1f804adc033cb1df649804cf4273cbf7 507 PRINTS PR00369 Flavodoxin signature 57 68 3.0E-13 T 15-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 AM378_01585 1f804adc033cb1df649804cf4273cbf7 507 PRINTS PR00369 Flavodoxin signature 87 97 3.0E-13 T 15-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 AM378_01585 1f804adc033cb1df649804cf4273cbf7 507 PRINTS PR00369 Flavodoxin signature 111 130 3.0E-13 T 15-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 AM378_15770 13a31ac6887f319124a1afb9cea46232 279 Pfam PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term 18 128 1.4E-46 T 15-10-2018 IPR029139 NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 AM378_15770 13a31ac6887f319124a1afb9cea46232 279 Hamap MF_00817 NADPH-dependent 7-cyano-7-deazaguanine reductase [queF]. 1 279 144.63 T 15-10-2018 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 AM378_15770 13a31ac6887f319124a1afb9cea46232 279 SUPERFAMILY SSF55620 184 263 7.19E-9 T 15-10-2018 AM378_15770 13a31ac6887f319124a1afb9cea46232 279 PIRSF PIRSF004750 3 279 1.7E-117 T 15-10-2018 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 AM378_15770 13a31ac6887f319124a1afb9cea46232 279 Pfam PF14489 QueF-like protein 193 266 8.0E-28 T 15-10-2018 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF GO:0008616|GO:0033739 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 AM378_15770 13a31ac6887f319124a1afb9cea46232 279 TIGRFAM TIGR03138 QueF: queuine synthase 9 279 7.6E-120 T 15-10-2018 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 AM378_15770 13a31ac6887f319124a1afb9cea46232 279 Gene3D G3DSA:3.30.1130.10 18 133 1.5E-42 T 15-10-2018 AM378_15770 13a31ac6887f319124a1afb9cea46232 279 Gene3D G3DSA:3.30.1130.10 142 279 5.9E-56 T 15-10-2018 AM378_10035 965d5e74ca0ace837c92a52732f46a97 280 Gene3D G3DSA:1.20.58.480 17 280 1.7E-99 T 15-10-2018 AM378_10035 965d5e74ca0ace837c92a52732f46a97 280 Hamap MF_01972 Tryptophan 2,3-dioxygenase [kynA]. 13 278 39.526 T 15-10-2018 IPR004981 Tryptophan 2,3-dioxygenase GO:0004833|GO:0019441|GO:0020037 KEGG: 00380+1.13.11.11|Reactome: R-HSA-71240 AM378_10035 965d5e74ca0ace837c92a52732f46a97 280 SUPERFAMILY SSF140959 19 278 2.22E-101 T 15-10-2018 IPR037217 Tryptophan/Indoleamine 2,3-dioxygenase-like GO:0019441|GO:0020037|GO:0046872 KEGG: 00380+1.13.11.11|Reactome: R-HSA-71240 AM378_10035 965d5e74ca0ace837c92a52732f46a97 280 Pfam PF03301 Tryptophan 2,3-dioxygenase 11 141 1.4E-41 T 15-10-2018 IPR004981 Tryptophan 2,3-dioxygenase GO:0004833|GO:0019441|GO:0020037 KEGG: 00380+1.13.11.11|Reactome: R-HSA-71240 AM378_10035 965d5e74ca0ace837c92a52732f46a97 280 Pfam PF03301 Tryptophan 2,3-dioxygenase 204 276 2.5E-21 T 15-10-2018 IPR004981 Tryptophan 2,3-dioxygenase GO:0004833|GO:0019441|GO:0020037 KEGG: 00380+1.13.11.11|Reactome: R-HSA-71240 AM378_10035 965d5e74ca0ace837c92a52732f46a97 280 TIGRFAM TIGR03036 trp_2_3_diox: tryptophan 2,3-dioxygenase 13 278 5.0E-124 T 15-10-2018 IPR017485 Tryptophan 2,3-dioxygenase, bacterial GO:0004833|GO:0019441 KEGG: 00380+1.13.11.11 AM378_02545 6eb68d1d8a6a92873fef427fb392fdbf 178 Gene3D G3DSA:1.25.40.10 78 178 1.2E-31 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AM378_02545 6eb68d1d8a6a92873fef427fb392fdbf 178 SUPERFAMILY SSF48452 2 174 1.14E-67 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AM378_02545 6eb68d1d8a6a92873fef427fb392fdbf 178 Gene3D G3DSA:1.20.58.320 1 77 1.8E-27 T 15-10-2018 AM378_02545 6eb68d1d8a6a92873fef427fb392fdbf 178 Pfam PF06041 Bacterial protein of unknown function (DUF924) 5 175 4.1E-61 T 15-10-2018 IPR010323 Protein of unknown function DUF924 AM378_11050 15242f8040a5fc820a961dfe4221fe44 268 SUPERFAMILY SSF53850 25 253 2.42E-39 T 15-10-2018 AM378_11050 15242f8040a5fc820a961dfe4221fe44 268 Gene3D G3DSA:3.40.190.10 27 251 1.4E-26 T 15-10-2018 AM378_11050 15242f8040a5fc820a961dfe4221fe44 268 Gene3D G3DSA:3.40.190.10 108 215 1.4E-26 T 15-10-2018 AM378_11050 15242f8040a5fc820a961dfe4221fe44 268 Pfam PF13531 Bacterial extracellular solute-binding protein 27 253 4.3E-39 T 15-10-2018 AM378_08825 bb9c92b70ac4e9578618f6b3ebf93db0 460 SMART SM00487 23 220 1.6E-56 T 15-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AM378_08825 bb9c92b70ac4e9578618f6b3ebf93db0 460 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 152 160 - T 15-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site AM378_08825 bb9c92b70ac4e9578618f6b3ebf93db0 460 Gene3D G3DSA:3.30.70.330 386 460 1.2E-20 T 15-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily AM378_08825 bb9c92b70ac4e9578618f6b3ebf93db0 460 Pfam PF00271 Helicase conserved C-terminal domain 236 337 2.4E-27 T 15-10-2018 IPR001650 Helicase, C-terminal AM378_08825 bb9c92b70ac4e9578618f6b3ebf93db0 460 SMART SM00490 256 337 4.3E-29 T 15-10-2018 IPR001650 Helicase, C-terminal AM378_08825 bb9c92b70ac4e9578618f6b3ebf93db0 460 Pfam PF03880 DbpA RNA binding domain 387 457 6.7E-23 T 15-10-2018 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain AM378_08825 bb9c92b70ac4e9578618f6b3ebf93db0 460 Gene3D G3DSA:3.40.50.300 211 373 5.4E-46 T 15-10-2018 AM378_08825 bb9c92b70ac4e9578618f6b3ebf93db0 460 Hamap MF_00965 ATP-dependent RNA helicase DbpA [dbpA]. 6 460 69.184 T 15-10-2018 IPR028619 ATP-dependent RNA helicase DbpA GO:0000027|GO:0003724 AM378_08825 bb9c92b70ac4e9578618f6b3ebf93db0 460 SUPERFAMILY SSF52540 74 358 1.19E-70 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_08825 bb9c92b70ac4e9578618f6b3ebf93db0 460 Pfam PF00270 DEAD/DEAH box helicase 28 193 2.3E-44 T 15-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AM378_08825 bb9c92b70ac4e9578618f6b3ebf93db0 460 Gene3D G3DSA:3.40.50.300 4 210 3.7E-70 T 15-10-2018 AM378_22495 da6f7a45a1e68f66b09bd79c8738bb07 195 Gene3D G3DSA:3.40.980.10 2 195 4.2E-64 T 15-10-2018 IPR036425 MoaB/Mog-like domain superfamily AM378_22495 da6f7a45a1e68f66b09bd79c8738bb07 195 SUPERFAMILY SSF53218 3 188 8.77E-47 T 15-10-2018 IPR036425 MoaB/Mog-like domain superfamily AM378_22495 da6f7a45a1e68f66b09bd79c8738bb07 195 ProSitePatterns PS01078 Molybdenum cofactor biosynthesis proteins signature 1. 69 82 - T 15-10-2018 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 Reactome: R-HSA-947581 AM378_22495 da6f7a45a1e68f66b09bd79c8738bb07 195 Pfam PF00994 Probable molybdopterin binding domain 8 147 3.1E-27 T 15-10-2018 IPR001453 MoaB/Mog domain AM378_22495 da6f7a45a1e68f66b09bd79c8738bb07 195 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 4 147 2.0E-40 T 15-10-2018 IPR001453 MoaB/Mog domain AM378_22495 da6f7a45a1e68f66b09bd79c8738bb07 195 SMART SM00852 7 153 1.9E-21 T 15-10-2018 IPR001453 MoaB/Mog domain AM378_13010 fda02b7da31e1ce98cd22bfcd63d4e61 549 SUPERFAMILY SSF161098 264 532 8.76E-38 T 15-10-2018 IPR035906 MetI-like superfamily AM378_13010 fda02b7da31e1ce98cd22bfcd63d4e61 549 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 281 540 2.1E-73 T 15-10-2018 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 AM378_13010 fda02b7da31e1ce98cd22bfcd63d4e61 549 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 317 543 1.1E-17 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AM378_13010 fda02b7da31e1ce98cd22bfcd63d4e61 549 Gene3D G3DSA:1.10.3720.10 292 544 5.4E-30 T 15-10-2018 IPR035906 MetI-like superfamily AM378_17880 222b337d4d021573ca08034af30cef83 292 SUPERFAMILY SSF118352 225 282 6.67E-21 T 15-10-2018 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 AM378_17880 222b337d4d021573ca08034af30cef83 292 Hamap MF_00117 33 kDa chaperonin [hslO]. 4 284 33.371 T 15-10-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 AM378_17880 222b337d4d021573ca08034af30cef83 292 Gene3D G3DSA:1.10.287.480 177 225 2.1E-24 T 15-10-2018 IPR023212 Heat shock protein Hsp33, helix hairpin bin domain superfamily AM378_17880 222b337d4d021573ca08034af30cef83 292 Gene3D G3DSA:3.90.1280.10 226 283 8.2E-24 T 15-10-2018 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 AM378_17880 222b337d4d021573ca08034af30cef83 292 SUPERFAMILY SSF64397 4 232 2.75E-78 T 15-10-2018 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 AM378_17880 222b337d4d021573ca08034af30cef83 292 PIRSF PIRSF005261 1 283 1.1E-74 T 15-10-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 AM378_17880 222b337d4d021573ca08034af30cef83 292 Pfam PF01430 Hsp33 protein 5 273 4.0E-87 T 15-10-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 AM378_17880 222b337d4d021573ca08034af30cef83 292 Gene3D G3DSA:3.55.30.10 1 176 6.6E-66 T 15-10-2018 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 AM378_21820 8e319db69871c885a365e658755fdfe3 300 Gene3D G3DSA:1.10.10.10 1 86 1.2E-21 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_21820 8e319db69871c885a365e658755fdfe3 300 SUPERFAMILY SSF53850 89 295 1.27E-35 T 15-10-2018 AM378_21820 8e319db69871c885a365e658755fdfe3 300 Gene3D G3DSA:3.40.190.10 170 268 5.0E-59 T 15-10-2018 AM378_21820 8e319db69871c885a365e658755fdfe3 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 65 1.1E-12 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_21820 8e319db69871c885a365e658755fdfe3 300 SUPERFAMILY SSF46785 3 81 1.7E-15 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM378_21820 8e319db69871c885a365e658755fdfe3 300 Gene3D G3DSA:3.40.190.10 91 292 5.0E-59 T 15-10-2018 AM378_21820 8e319db69871c885a365e658755fdfe3 300 Pfam PF03466 LysR substrate binding domain 95 295 4.8E-17 T 15-10-2018 IPR005119 LysR, substrate-binding AM378_14475 105da931078a0f7d6a6935b87a1c52b0 1123 Gene3D G3DSA:1.10.10.990 865 936 6.5E-30 T 15-10-2018 AM378_14475 105da931078a0f7d6a6935b87a1c52b0 1123 SUPERFAMILY SSF52540 360 811 5.1E-107 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_14475 105da931078a0f7d6a6935b87a1c52b0 1123 SUPERFAMILY SSF52540 1 347 6.9E-129 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_14475 105da931078a0f7d6a6935b87a1c52b0 1123 Gene3D G3DSA:3.40.50.10930 4 315 3.0E-133 T 15-10-2018 AM378_14475 105da931078a0f7d6a6935b87a1c52b0 1123 Gene3D G3DSA:1.10.10.160 79 187 3.0E-133 T 15-10-2018 IPR013986 DExx box DNA helicase domain superfamily AM378_14475 105da931078a0f7d6a6935b87a1c52b0 1123 Gene3D G3DSA:1.10.486.10 456 664 4.8E-203 T 15-10-2018 AM378_14475 105da931078a0f7d6a6935b87a1c52b0 1123 Hamap MF_01486 RecBCD enzyme subunit RecC [recC]. 1 1113 21.283 T 15-10-2018 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 AM378_14475 105da931078a0f7d6a6935b87a1c52b0 1123 PIRSF PIRSF000980 1 1122 0.0 T 15-10-2018 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 AM378_14475 105da931078a0f7d6a6935b87a1c52b0 1123 Pfam PF04257 Exodeoxyribonuclease V, gamma subunit 1 807 0.0 T 15-10-2018 AM378_14475 105da931078a0f7d6a6935b87a1c52b0 1123 SUPERFAMILY SSF52980 819 1120 6.43E-97 T 15-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 AM378_14475 105da931078a0f7d6a6935b87a1c52b0 1123 Gene3D G3DSA:3.40.50.300 334 809 4.8E-203 T 15-10-2018 AM378_14475 105da931078a0f7d6a6935b87a1c52b0 1123 TIGRFAM TIGR01450 recC: exodeoxyribonuclease V, gamma subunit 2 1088 0.0 T 15-10-2018 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 AM378_05460 8f8dbbb852757cbb2c1ff35d742de29b 221 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 76 104 - T 15-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 AM378_05460 8f8dbbb852757cbb2c1ff35d742de29b 221 SUPERFAMILY SSF53955 54 219 6.76E-30 T 15-10-2018 IPR023346 Lysozyme-like domain superfamily AM378_05460 8f8dbbb852757cbb2c1ff35d742de29b 221 Pfam PF01464 Transglycosylase SLT domain 58 180 1.1E-27 T 15-10-2018 IPR008258 Transglycosylase SLT domain 1 AM378_05460 8f8dbbb852757cbb2c1ff35d742de29b 221 Gene3D G3DSA:1.10.530.10 47 219 1.0E-45 T 15-10-2018 AM378_14605 3d7a4d805386f7c4462ef0bd262a5573 575 Pfam PF06472 ABC transporter transmembrane region 2 9 295 3.5E-65 T 15-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 AM378_14605 3d7a4d805386f7c4462ef0bd262a5573 575 Gene3D G3DSA:3.40.50.300 343 562 2.0E-42 T 15-10-2018 AM378_14605 3d7a4d805386f7c4462ef0bd262a5573 575 ProSitePatterns PS00211 ABC transporters family signature. 488 502 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM378_14605 3d7a4d805386f7c4462ef0bd262a5573 575 SUPERFAMILY SSF52540 362 554 3.55E-37 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_14605 3d7a4d805386f7c4462ef0bd262a5573 575 SMART SM00382 390 570 3.7E-15 T 15-10-2018 IPR003593 AAA+ ATPase domain AM378_14605 3d7a4d805386f7c4462ef0bd262a5573 575 Pfam PF00005 ABC transporter 383 516 2.6E-20 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM378_14605 3d7a4d805386f7c4462ef0bd262a5573 575 Gene3D G3DSA:1.20.1560.10 10 342 1.4E-10 T 15-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 AM378_14605 3d7a4d805386f7c4462ef0bd262a5573 575 SUPERFAMILY SSF90123 24 340 7.72E-26 T 15-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 AM378_19400 0c08df7fbd7cbd06312ba0dcd679287a 454 Pfam PF12631 MnmE helical domain 123 451 2.3E-60 T 15-10-2018 IPR025867 MnmE, helical domain Reactome: R-HSA-6787450 AM378_19400 0c08df7fbd7cbd06312ba0dcd679287a 454 SUPERFAMILY SSF52540 72 372 1.81E-45 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_19400 0c08df7fbd7cbd06312ba0dcd679287a 454 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 216 371 3.0E-22 T 15-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 AM378_19400 0c08df7fbd7cbd06312ba0dcd679287a 454 Pfam PF01926 50S ribosome-binding GTPase 218 307 3.9E-24 T 15-10-2018 IPR006073 GTP binding domain GO:0005525 AM378_19400 0c08df7fbd7cbd06312ba0dcd679287a 454 Hamap MF_00379 tRNA modification GTPase MnmE [mnmE]. 5 454 33.069 T 15-10-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 AM378_19400 0c08df7fbd7cbd06312ba0dcd679287a 454 TIGRFAM TIGR00450 mnmE_trmE_thdF: tRNA modification GTPase TrmE 11 454 3.2E-98 T 15-10-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 AM378_19400 0c08df7fbd7cbd06312ba0dcd679287a 454 Pfam PF10396 GTP-binding protein TrmE N-terminus 6 120 1.9E-34 T 15-10-2018 IPR018948 GTP-binding protein TrmE, N-terminal Reactome: R-HSA-6787450 AM378_19400 0c08df7fbd7cbd06312ba0dcd679287a 454 SUPERFAMILY SSF116878 121 454 5.36E-51 T 15-10-2018 AM378_19400 0c08df7fbd7cbd06312ba0dcd679287a 454 Gene3D G3DSA:3.40.50.300 217 382 1.1E-103 T 15-10-2018 AM378_19400 0c08df7fbd7cbd06312ba0dcd679287a 454 Gene3D G3DSA:3.30.1360.120 1 121 1.1E-37 T 15-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 AM378_19400 0c08df7fbd7cbd06312ba0dcd679287a 454 Gene3D G3DSA:1.20.120.430 122 454 1.1E-103 T 15-10-2018 IPR027368 tRNA modification GTPase MnmE domain 2 Reactome: R-HSA-6787450 AM378_22230 33b62ebd7bf46cd4b6f57e342c931b4f 398 Gene3D G3DSA:1.20.1250.20 204 394 7.6E-10 T 15-10-2018 AM378_22230 33b62ebd7bf46cd4b6f57e342c931b4f 398 Pfam PF07690 Major Facilitator Superfamily 218 384 7.3E-10 T 15-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM378_22230 33b62ebd7bf46cd4b6f57e342c931b4f 398 Gene3D G3DSA:1.20.1250.20 16 196 6.9E-11 T 15-10-2018 AM378_22230 33b62ebd7bf46cd4b6f57e342c931b4f 398 SUPERFAMILY SSF103473 17 390 5.36E-26 T 15-10-2018 IPR036259 MFS transporter superfamily AM378_09100 7f4d42bc1c1ba7fc89b821a04c9181a1 268 Pfam PF00753 Metallo-beta-lactamase superfamily 32 226 2.3E-12 T 15-10-2018 IPR001279 Metallo-beta-lactamase AM378_09100 7f4d42bc1c1ba7fc89b821a04c9181a1 268 SMART SM00849 31 264 1.5E-5 T 15-10-2018 IPR001279 Metallo-beta-lactamase AM378_09100 7f4d42bc1c1ba7fc89b821a04c9181a1 268 Gene3D G3DSA:3.60.15.10 2 268 9.9E-41 T 15-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AM378_09100 7f4d42bc1c1ba7fc89b821a04c9181a1 268 SUPERFAMILY SSF56281 25 266 1.97E-26 T 15-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AM378_19850 ba3a7ac550f269d54f94add17c232536 443 Gene3D G3DSA:1.20.1250.20 19 223 4.4E-50 T 15-10-2018 AM378_19850 ba3a7ac550f269d54f94add17c232536 443 PIRSF PIRSF002808 6 443 6.7E-145 T 15-10-2018 IPR000849 Sugar phosphate transporter GO:0016021|GO:0022857|GO:0055085 AM378_19850 ba3a7ac550f269d54f94add17c232536 443 ProSitePatterns PS00942 glpT family of transporters signature. 151 167 - T 15-10-2018 IPR021159 Glycerate/sugar phosphate transporter, conserved site Reactome: R-HSA-3229133|Reactome: R-HSA-70263 AM378_19850 ba3a7ac550f269d54f94add17c232536 443 Pfam PF07690 Major Facilitator Superfamily 36 396 1.3E-50 T 15-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM378_19850 ba3a7ac550f269d54f94add17c232536 443 Gene3D G3DSA:1.20.1250.20 238 436 3.6E-46 T 15-10-2018 AM378_19850 ba3a7ac550f269d54f94add17c232536 443 TIGRFAM TIGR00881 2A0104: phosphoglycerate transporter family protein 36 413 5.6E-143 T 15-10-2018 AM378_19850 ba3a7ac550f269d54f94add17c232536 443 SUPERFAMILY SSF103473 17 432 8.11E-81 T 15-10-2018 IPR036259 MFS transporter superfamily AM378_22120 ac18068ade78173ad8bb68918b4a0cb7 254 SUPERFAMILY SSF56529 39 247 8.11E-75 T 15-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 AM378_22120 ac18068ade78173ad8bb68918b4a0cb7 254 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 46 243 1.9E-61 T 15-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 AM378_22120 ac18068ade78173ad8bb68918b4a0cb7 254 Gene3D G3DSA:3.90.850.10 34 249 3.6E-80 T 15-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 AM378_22120 ac18068ade78173ad8bb68918b4a0cb7 254 TIGRFAM TIGR02303 HpaG-C-term: 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, C-terminal subunit 2 246 1.7E-118 T 15-10-2018 IPR012684 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, C-terminal subunit GO:0008704|GO:0018800|GO:1901023 KEGG: 00350+5.3.3.10+4.1.1.68 AM378_17545 b2739551f4f475630e6298f9ff66d9dc 159 Pfam PF00210 Ferritin-like domain 8 143 2.8E-39 T 15-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 AM378_17545 b2739551f4f475630e6298f9ff66d9dc 159 PIRSF PIRSF002560 1 157 1.8E-70 T 15-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AM378_17545 b2739551f4f475630e6298f9ff66d9dc 159 ProSitePatterns PS00549 Bacterioferritin signature. 1 19 - T 15-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AM378_17545 b2739551f4f475630e6298f9ff66d9dc 159 SUPERFAMILY SSF47240 1 153 2.29E-53 T 15-10-2018 IPR009078 Ferritin-like superfamily AM378_17545 b2739551f4f475630e6298f9ff66d9dc 159 TIGRFAM TIGR00754 bfr: bacterioferritin 1 156 3.4E-80 T 15-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AM378_17545 b2739551f4f475630e6298f9ff66d9dc 159 PRINTS PR00601 Bacterioferritin signature 65 85 7.8E-77 T 15-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AM378_17545 b2739551f4f475630e6298f9ff66d9dc 159 PRINTS PR00601 Bacterioferritin signature 107 127 7.8E-77 T 15-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AM378_17545 b2739551f4f475630e6298f9ff66d9dc 159 PRINTS PR00601 Bacterioferritin signature 128 149 7.8E-77 T 15-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AM378_17545 b2739551f4f475630e6298f9ff66d9dc 159 PRINTS PR00601 Bacterioferritin signature 3 22 7.8E-77 T 15-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AM378_17545 b2739551f4f475630e6298f9ff66d9dc 159 PRINTS PR00601 Bacterioferritin signature 44 64 7.8E-77 T 15-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AM378_17545 b2739551f4f475630e6298f9ff66d9dc 159 PRINTS PR00601 Bacterioferritin signature 86 106 7.8E-77 T 15-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AM378_17545 b2739551f4f475630e6298f9ff66d9dc 159 PRINTS PR00601 Bacterioferritin signature 23 43 7.8E-77 T 15-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AM378_17545 b2739551f4f475630e6298f9ff66d9dc 159 Gene3D G3DSA:1.20.1260.10 1 157 1.3E-70 T 15-10-2018 IPR012347 Ferritin-like AM378_00505 c3ea15af9f6c857a600d8aef339d42a4 810 Pfam PF02687 FtsX-like permease family 714 800 3.2E-6 T 15-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 AM378_14470 d1478fcc022db08d8123a3502b1c3bf3 962 ProSitePatterns PS00143 Insulinase family, zinc-binding region signature. 76 99 - T 15-10-2018 IPR001431 Peptidase M16, zinc-binding site GO:0004222|GO:0006508 AM378_14470 d1478fcc022db08d8123a3502b1c3bf3 962 SUPERFAMILY SSF63411 35 263 3.47E-52 T 15-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AM378_14470 d1478fcc022db08d8123a3502b1c3bf3 962 SUPERFAMILY SSF63411 266 503 2.5E-71 T 15-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AM378_14470 d1478fcc022db08d8123a3502b1c3bf3 962 SUPERFAMILY SSF63411 505 731 5.59E-49 T 15-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AM378_14470 d1478fcc022db08d8123a3502b1c3bf3 962 Gene3D G3DSA:3.30.830.10 653 918 2.4E-133 T 15-10-2018 AM378_14470 d1478fcc022db08d8123a3502b1c3bf3 962 Pfam PF00675 Insulinase (Peptidase family M16) 56 192 6.1E-35 T 15-10-2018 IPR011765 Peptidase M16, N-terminal AM378_14470 d1478fcc022db08d8123a3502b1c3bf3 962 Gene3D G3DSA:3.30.830.10 505 886 2.4E-133 T 15-10-2018 AM378_14470 d1478fcc022db08d8123a3502b1c3bf3 962 Gene3D G3DSA:3.30.830.10 274 503 4.3E-71 T 15-10-2018 AM378_14470 d1478fcc022db08d8123a3502b1c3bf3 962 Pfam PF16187 Middle or third domain of peptidase_M16 401 676 1.1E-57 T 15-10-2018 IPR032632 Peptidase M16, middle/third domain AM378_14470 d1478fcc022db08d8123a3502b1c3bf3 962 SUPERFAMILY SSF63411 746 955 2.97E-47 T 15-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AM378_14470 d1478fcc022db08d8123a3502b1c3bf3 962 Gene3D G3DSA:3.30.830.10 26 272 3.2E-77 T 15-10-2018 AM378_14470 d1478fcc022db08d8123a3502b1c3bf3 962 Pfam PF05193 Peptidase M16 inactive domain 683 859 9.3E-9 T 15-10-2018 IPR007863 Peptidase M16, C-terminal AM378_14470 d1478fcc022db08d8123a3502b1c3bf3 962 Pfam PF05193 Peptidase M16 inactive domain 217 393 2.0E-20 T 15-10-2018 IPR007863 Peptidase M16, C-terminal AM378_10340 0f786a6cec23749662816f96c02b7d3f 352 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 116 135 1.7E-7 T 15-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AM378_10340 0f786a6cec23749662816f96c02b7d3f 352 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 36 46 1.7E-7 T 15-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AM378_10340 0f786a6cec23749662816f96c02b7d3f 352 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 141 150 1.7E-7 T 15-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AM378_10340 0f786a6cec23749662816f96c02b7d3f 352 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 55 62 1.7E-7 T 15-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AM378_10340 0f786a6cec23749662816f96c02b7d3f 352 Gene3D G3DSA:3.10.20.30 247 352 2.3E-26 T 15-10-2018 IPR012675 Beta-grasp domain superfamily AM378_10340 0f786a6cec23749662816f96c02b7d3f 352 SUPERFAMILY SSF63380 2 107 6.35E-25 T 15-10-2018 IPR017938 Riboflavin synthase-like beta-barrel AM378_10340 0f786a6cec23749662816f96c02b7d3f 352 TIGRFAM TIGR02160 PA_CoA_Oxy5: phenylacetate-CoA oxygenase/reductase, PaaK subunit 4 351 2.6E-146 T 15-10-2018 IPR011884 Phenylacetate-CoA oxygenase/reductase, PaaK subunit GO:0010124 AM378_10340 0f786a6cec23749662816f96c02b7d3f 352 Pfam PF00970 Oxidoreductase FAD-binding domain 8 105 1.5E-12 T 15-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 AM378_10340 0f786a6cec23749662816f96c02b7d3f 352 SUPERFAMILY SSF54292 234 349 8.22E-29 T 15-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 AM378_10340 0f786a6cec23749662816f96c02b7d3f 352 Gene3D G3DSA:3.40.50.80 107 246 1.4E-31 T 15-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AM378_10340 0f786a6cec23749662816f96c02b7d3f 352 SUPERFAMILY SSF52343 94 242 7.2E-35 T 15-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AM378_10340 0f786a6cec23749662816f96c02b7d3f 352 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 299 307 - T 15-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 AM378_10340 0f786a6cec23749662816f96c02b7d3f 352 PRINTS PR00406 Cytochrome B5 reductase signature 91 105 7.5E-8 T 15-10-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 AM378_10340 0f786a6cec23749662816f96c02b7d3f 352 PRINTS PR00406 Cytochrome B5 reductase signature 116 135 7.5E-8 T 15-10-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 AM378_10340 0f786a6cec23749662816f96c02b7d3f 352 PRINTS PR00406 Cytochrome B5 reductase signature 212 220 7.5E-8 T 15-10-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 AM378_10340 0f786a6cec23749662816f96c02b7d3f 352 Pfam PF00175 Oxidoreductase NAD-binding domain 118 226 1.2E-16 T 15-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 AM378_10340 0f786a6cec23749662816f96c02b7d3f 352 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 268 341 9.8E-16 T 15-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AM378_10340 0f786a6cec23749662816f96c02b7d3f 352 Gene3D G3DSA:2.40.30.10 2 104 6.6E-23 T 15-10-2018 AM378_13215 cfdb21490618bf262f8df44c3762d08f 169 Pfam PF10908 Protein of unknown function (DUF2778) 23 147 7.3E-38 T 15-10-2018 IPR021225 Protein of unknown function DUF2778 AM378_19430 26f402973e365a57e2a52edd3f2b7a50 366 Gene3D G3DSA:3.10.150.10 124 247 1.0E-39 T 15-10-2018 AM378_19430 26f402973e365a57e2a52edd3f2b7a50 366 Gene3D G3DSA:3.10.150.10 248 366 2.6E-41 T 15-10-2018 AM378_19430 26f402973e365a57e2a52edd3f2b7a50 366 SUPERFAMILY SSF55979 1 118 2.28E-26 T 15-10-2018 AM378_19430 26f402973e365a57e2a52edd3f2b7a50 366 TIGRFAM TIGR00663 dnan: DNA polymerase III, beta subunit 1 366 7.9E-113 T 15-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 AM378_19430 26f402973e365a57e2a52edd3f2b7a50 366 Pfam PF02767 DNA polymerase III beta subunit, central domain 129 243 2.1E-40 T 15-10-2018 IPR022637 DNA polymerase III, beta sliding clamp, central GO:0003887|GO:0006260|GO:0008408|GO:0009360 AM378_19430 26f402973e365a57e2a52edd3f2b7a50 366 Pfam PF00712 DNA polymerase III beta subunit, N-terminal domain 1 120 8.8E-39 T 15-10-2018 IPR022634 DNA polymerase III, beta sliding clamp, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 AM378_19430 26f402973e365a57e2a52edd3f2b7a50 366 Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain 245 365 5.2E-44 T 15-10-2018 IPR022635 DNA polymerase III, beta sliding clamp, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 AM378_19430 26f402973e365a57e2a52edd3f2b7a50 366 SMART SM00480 17 362 1.6E-167 T 15-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 AM378_19430 26f402973e365a57e2a52edd3f2b7a50 366 PIRSF PIRSF000804 1 366 4.3E-117 T 15-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 AM378_19430 26f402973e365a57e2a52edd3f2b7a50 366 SUPERFAMILY SSF55979 245 366 5.16E-37 T 15-10-2018 AM378_19430 26f402973e365a57e2a52edd3f2b7a50 366 Gene3D G3DSA:3.10.150.10 1 123 2.4E-43 T 15-10-2018 AM378_19430 26f402973e365a57e2a52edd3f2b7a50 366 SUPERFAMILY SSF55979 125 244 3.59E-31 T 15-10-2018 AM378_05000 38747db2970294fa9649567159eeaf74 456 Gene3D G3DSA:1.10.275.10 1 117 1.7E-53 T 15-10-2018 IPR024083 Fumarase/histidase, N-terminal AM378_05000 38747db2970294fa9649567159eeaf74 456 Gene3D G3DSA:1.20.200.10 118 446 1.0E-157 T 15-10-2018 AM378_05000 38747db2970294fa9649567159eeaf74 456 Pfam PF08328 Adenylosuccinate lyase C-terminal 331 445 2.9E-52 T 15-10-2018 IPR013539 Adenylosuccinate lyase PurB, C-terminal GO:0004018|GO:0006188 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234 AM378_05000 38747db2970294fa9649567159eeaf74 456 TIGRFAM TIGR00928 purB: adenylosuccinate lyase 12 455 2.1E-152 T 15-10-2018 IPR004769 Adenylosuccinate lyase GO:0004018|GO:0009152 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AM378_05000 38747db2970294fa9649567159eeaf74 456 Gene3D G3DSA:1.10.40.30 382 445 1.0E-157 T 15-10-2018 AM378_05000 38747db2970294fa9649567159eeaf74 456 SUPERFAMILY SSF48557 10 454 1.23E-106 T 15-10-2018 IPR008948 L-Aspartase-like GO:0003824 AM378_05000 38747db2970294fa9649567159eeaf74 456 Pfam PF00206 Lyase 14 312 5.4E-78 T 15-10-2018 IPR022761 Fumarate lyase, N-terminal AM378_05000 38747db2970294fa9649567159eeaf74 456 ProSitePatterns PS00163 Fumarate lyases signature. 294 303 - T 15-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 AM378_05000 38747db2970294fa9649567159eeaf74 456 PRINTS PR00149 Fumarate lyase superfamily signature 294 310 4.7E-17 T 15-10-2018 IPR000362 Fumarate lyase family AM378_05000 38747db2970294fa9649567159eeaf74 456 PRINTS PR00149 Fumarate lyase superfamily signature 251 278 4.7E-17 T 15-10-2018 IPR000362 Fumarate lyase family AM378_05000 38747db2970294fa9649567159eeaf74 456 PRINTS PR00149 Fumarate lyase superfamily signature 117 135 4.7E-17 T 15-10-2018 IPR000362 Fumarate lyase family AM378_05000 38747db2970294fa9649567159eeaf74 456 PRINTS PR00149 Fumarate lyase superfamily signature 163 181 4.7E-17 T 15-10-2018 IPR000362 Fumarate lyase family AM378_21685 7fe6cd266d2887a5831ec4489ee5f439 238 SMART SM00421 171 228 2.8E-13 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM378_21685 7fe6cd266d2887a5831ec4489ee5f439 238 Gene3D G3DSA:1.10.10.10 175 236 1.9E-19 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_21685 7fe6cd266d2887a5831ec4489ee5f439 238 Gene3D G3DSA:3.30.450.80 2 174 9.5E-44 T 15-10-2018 IPR036693 Transcription factor LuxR-like, autoinducer-binding domain superfamily AM378_21685 7fe6cd266d2887a5831ec4489ee5f439 238 Pfam PF00196 Bacterial regulatory proteins, luxR family 173 227 6.2E-14 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM378_21685 7fe6cd266d2887a5831ec4489ee5f439 238 SUPERFAMILY SSF75516 11 158 2.09E-32 T 15-10-2018 IPR036693 Transcription factor LuxR-like, autoinducer-binding domain superfamily AM378_21685 7fe6cd266d2887a5831ec4489ee5f439 238 SUPERFAMILY SSF46894 166 234 2.72E-14 T 15-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AM378_21685 7fe6cd266d2887a5831ec4489ee5f439 238 Pfam PF03472 Autoinducer binding domain 27 152 2.0E-24 T 15-10-2018 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain AM378_21685 7fe6cd266d2887a5831ec4489ee5f439 238 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 188 204 2.7E-8 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM378_21685 7fe6cd266d2887a5831ec4489ee5f439 238 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 174 188 2.7E-8 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM378_21685 7fe6cd266d2887a5831ec4489ee5f439 238 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 204 216 2.7E-8 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM378_13810 de9dc21bc940ccdbf70c5ec41efcd3fb 193 SUPERFAMILY SSF46689 4 66 4.98E-12 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AM378_13810 de9dc21bc940ccdbf70c5ec41efcd3fb 193 Pfam PF13977 BetI-type transcriptional repressor, C-terminal 91 189 1.4E-7 T 15-10-2018 IPR039538 BetI-type transcriptional repressor, C-terminal AM378_13810 de9dc21bc940ccdbf70c5ec41efcd3fb 193 Gene3D G3DSA:1.10.357.10 6 193 1.1E-28 T 15-10-2018 AM378_13810 de9dc21bc940ccdbf70c5ec41efcd3fb 193 SUPERFAMILY SSF48498 92 191 4.73E-16 T 15-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AM378_13810 de9dc21bc940ccdbf70c5ec41efcd3fb 193 Pfam PF00440 Bacterial regulatory proteins, tetR family 13 58 4.3E-9 T 15-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM378_23160 8fc359a39c5286d6af0c82a47d70bbec 332 Pfam PF00140 Sigma-70 factor, region 1.2 58 89 5.1E-11 T 15-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM378_23160 8fc359a39c5286d6af0c82a47d70bbec 332 TIGRFAM TIGR02394 rpoS_proteo: RNA polymerase sigma factor RpoS 50 330 1.5E-144 T 15-10-2018 IPR012761 RNA polymerase sigma factor RpoS GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM378_23160 8fc359a39c5286d6af0c82a47d70bbec 332 Pfam PF04545 Sigma-70, region 4 264 317 2.7E-15 T 15-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 AM378_23160 8fc359a39c5286d6af0c82a47d70bbec 332 Gene3D G3DSA:1.10.601.10 86 168 5.5E-46 T 15-10-2018 AM378_23160 8fc359a39c5286d6af0c82a47d70bbec 332 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 93 319 4.1E-35 T 15-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 AM378_23160 8fc359a39c5286d6af0c82a47d70bbec 332 SUPERFAMILY SSF88659 169 243 8.72E-15 T 15-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like AM378_23160 8fc359a39c5286d6af0c82a47d70bbec 332 Pfam PF04539 Sigma-70 region 3 176 250 9.3E-21 T 15-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 AM378_23160 8fc359a39c5286d6af0c82a47d70bbec 332 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 289 315 - T 15-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AM378_23160 8fc359a39c5286d6af0c82a47d70bbec 332 SUPERFAMILY SSF88946 58 166 1.96E-45 T 15-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 AM378_23160 8fc359a39c5286d6af0c82a47d70bbec 332 Gene3D G3DSA:1.10.10.10 246 322 9.8E-20 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_23160 8fc359a39c5286d6af0c82a47d70bbec 332 PRINTS PR00046 Major sigma-70 factor signature 268 280 2.5E-27 T 15-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AM378_23160 8fc359a39c5286d6af0c82a47d70bbec 332 PRINTS PR00046 Major sigma-70 factor signature 304 315 2.5E-27 T 15-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AM378_23160 8fc359a39c5286d6af0c82a47d70bbec 332 PRINTS PR00046 Major sigma-70 factor signature 289 304 2.5E-27 T 15-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AM378_23160 8fc359a39c5286d6af0c82a47d70bbec 332 PRINTS PR00046 Major sigma-70 factor signature 120 133 2.5E-27 T 15-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AM378_23160 8fc359a39c5286d6af0c82a47d70bbec 332 PRINTS PR00046 Major sigma-70 factor signature 144 152 2.5E-27 T 15-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AM378_23160 8fc359a39c5286d6af0c82a47d70bbec 332 SUPERFAMILY SSF88659 227 321 5.05E-23 T 15-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like AM378_23160 8fc359a39c5286d6af0c82a47d70bbec 332 Hamap MF_00959 RNA polymerase sigma factor RpoS [rpoS]. 12 330 39.935 T 15-10-2018 IPR012761 RNA polymerase sigma factor RpoS GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM378_23160 8fc359a39c5286d6af0c82a47d70bbec 332 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 120 133 - T 15-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AM378_23160 8fc359a39c5286d6af0c82a47d70bbec 332 Pfam PF04542 Sigma-70 region 2 96 165 3.2E-21 T 15-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 AM378_23160 8fc359a39c5286d6af0c82a47d70bbec 332 Gene3D G3DSA:1.10.10.10 169 244 4.1E-18 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_09800 cac0250d3046efb643cd7b4e617b4dcc 556 SUPERFAMILY SSF58104 236 518 7.19E-76 T 15-10-2018 AM378_09800 cac0250d3046efb643cd7b4e617b4dcc 556 Pfam PF00672 HAMP domain 218 264 3.1E-11 T 15-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AM378_09800 cac0250d3046efb643cd7b4e617b4dcc 556 SMART SM00319 44 182 1.7E-55 T 15-10-2018 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding GO:0006935|GO:0007165 AM378_09800 cac0250d3046efb643cd7b4e617b4dcc 556 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 328 484 8.0E-59 T 15-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AM378_09800 cac0250d3046efb643cd7b4e617b4dcc 556 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 290 319 2.7E-92 T 15-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AM378_09800 cac0250d3046efb643cd7b4e617b4dcc 556 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 191 211 2.7E-92 T 15-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AM378_09800 cac0250d3046efb643cd7b4e617b4dcc 556 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 60 75 2.7E-92 T 15-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AM378_09800 cac0250d3046efb643cd7b4e617b4dcc 556 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 444 473 2.7E-92 T 15-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AM378_09800 cac0250d3046efb643cd7b4e617b4dcc 556 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 5 30 2.7E-92 T 15-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AM378_09800 cac0250d3046efb643cd7b4e617b4dcc 556 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 396 425 2.7E-92 T 15-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AM378_09800 cac0250d3046efb643cd7b4e617b4dcc 556 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 367 394 2.7E-92 T 15-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AM378_09800 cac0250d3046efb643cd7b4e617b4dcc 556 SUPERFAMILY SSF47170 25 182 4.32E-51 T 15-10-2018 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily AM378_09800 cac0250d3046efb643cd7b4e617b4dcc 556 SMART SM00304 216 268 2.0E-13 T 15-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AM378_09800 cac0250d3046efb643cd7b4e617b4dcc 556 Pfam PF02203 Tar ligand binding domain homologue 1 176 2.3E-57 T 15-10-2018 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding GO:0006935|GO:0007165 AM378_09800 cac0250d3046efb643cd7b4e617b4dcc 556 Gene3D G3DSA:1.10.287.950 216 518 3.8E-100 T 15-10-2018 AM378_09800 cac0250d3046efb643cd7b4e617b4dcc 556 ProSitePatterns PS00538 Bacterial chemotaxis sensory transducers signature. 294 316 - T 15-10-2018 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site AM378_09800 cac0250d3046efb643cd7b4e617b4dcc 556 SMART SM00283 269 516 1.1E-96 T 15-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AM378_09800 cac0250d3046efb643cd7b4e617b4dcc 556 Gene3D G3DSA:1.20.120.30 22 194 5.9E-67 T 15-10-2018 AM378_06445 9d2fa24dcee503d513845fbc9646e08e 210 PIRSF PIRSF006324 2 209 9.7E-50 T 15-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AM378_06445 9d2fa24dcee503d513845fbc9646e08e 210 Pfam PF01810 LysE type translocator 17 205 2.4E-29 T 15-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AM378_07885 477bb3f28784abbd691df13feaf1c123 118 Pfam PF15586 Immunity protein 8 4 113 8.7E-41 T 15-10-2018 IPR028964 Immunity protein 8 AM378_01610 37672eff19dc72a2dcc01403e68b5ba7 367 SUPERFAMILY SSF52440 3 139 9.59E-36 T 15-10-2018 IPR016185 Pre-ATP-grasp domain superfamily AM378_01610 37672eff19dc72a2dcc01403e68b5ba7 367 PIRSF PIRSF039102 1 359 7.4E-134 T 15-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 AM378_01610 37672eff19dc72a2dcc01403e68b5ba7 367 Pfam PF01820 D-ala D-ala ligase N-terminus 5 129 1.1E-29 T 15-10-2018 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 AM378_01610 37672eff19dc72a2dcc01403e68b5ba7 367 Pfam PF07478 D-ala D-ala ligase C-terminus 147 348 1.9E-79 T 15-10-2018 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 AM378_01610 37672eff19dc72a2dcc01403e68b5ba7 367 SUPERFAMILY SSF56059 140 357 1.56E-62 T 15-10-2018 AM378_01610 37672eff19dc72a2dcc01403e68b5ba7 367 ProSitePatterns PS00844 D-alanine--D-alanine ligase signature 2. 293 321 - T 15-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 AM378_01610 37672eff19dc72a2dcc01403e68b5ba7 367 Gene3D G3DSA:3.40.50.20 1 128 2.6E-44 T 15-10-2018 AM378_01610 37672eff19dc72a2dcc01403e68b5ba7 367 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 107 118 - T 15-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 AM378_01610 37672eff19dc72a2dcc01403e68b5ba7 367 Gene3D G3DSA:3.30.470.20 129 353 1.3E-89 T 15-10-2018 AM378_01610 37672eff19dc72a2dcc01403e68b5ba7 367 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 4 351 43.183 T 15-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 AM378_01610 37672eff19dc72a2dcc01403e68b5ba7 367 Gene3D G3DSA:3.30.1490.20 155 224 1.3E-89 T 15-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 AM378_01610 37672eff19dc72a2dcc01403e68b5ba7 367 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 5 350 1.1E-113 T 15-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 AM378_10675 47266d0ecebadda4c5e2c45a23e5e478 303 Pfam PF03466 LysR substrate binding domain 93 298 1.6E-36 T 15-10-2018 IPR005119 LysR, substrate-binding AM378_10675 47266d0ecebadda4c5e2c45a23e5e478 303 SUPERFAMILY SSF53850 94 300 1.77E-39 T 15-10-2018 AM378_10675 47266d0ecebadda4c5e2c45a23e5e478 303 Gene3D G3DSA:3.40.190.10 169 270 1.4E-51 T 15-10-2018 AM378_10675 47266d0ecebadda4c5e2c45a23e5e478 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 67 2.0E-17 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_10675 47266d0ecebadda4c5e2c45a23e5e478 303 SUPERFAMILY SSF46785 6 88 7.71E-18 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM378_10675 47266d0ecebadda4c5e2c45a23e5e478 303 Gene3D G3DSA:3.40.190.10 97 295 1.4E-51 T 15-10-2018 AM378_10675 47266d0ecebadda4c5e2c45a23e5e478 303 Gene3D G3DSA:1.10.10.10 7 94 2.4E-19 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_04110 1981555c4000997f06ea3b5f66196fb9 401 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 56 269 1.2E-15 T 15-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AM378_04110 1981555c4000997f06ea3b5f66196fb9 401 Gene3D G3DSA:2.40.30.170 56 326 2.0E-90 T 15-10-2018 AM378_04110 1981555c4000997f06ea3b5f66196fb9 401 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 45 388 4.5E-48 T 15-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AM378_04110 1981555c4000997f06ea3b5f66196fb9 401 Gene3D G3DSA:1.10.287.470 101 192 2.0E-90 T 15-10-2018 AM378_04110 1981555c4000997f06ea3b5f66196fb9 401 SUPERFAMILY SSF111369 59 248 1.57E-22 T 15-10-2018 AM378_04110 1981555c4000997f06ea3b5f66196fb9 401 Gene3D G3DSA:2.40.420.20 51 386 2.0E-90 T 15-10-2018 AM378_04110 1981555c4000997f06ea3b5f66196fb9 401 Gene3D G3DSA:2.40.50.100 67 229 2.0E-90 T 15-10-2018 AM378_11490 9f7b9d9d4adb25db5a1ee2cc68fd315b 593 PIRSF PIRSF004950 6 593 5.2E-236 T 15-10-2018 IPR012159 Inner membrane protein YejM AM378_11490 9f7b9d9d4adb25db5a1ee2cc68fd315b 593 Gene3D G3DSA:3.40.720.10 251 517 4.8E-38 T 15-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 AM378_11490 9f7b9d9d4adb25db5a1ee2cc68fd315b 593 Pfam PF00884 Sulfatase 261 507 1.3E-30 T 15-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 AM378_11490 9f7b9d9d4adb25db5a1ee2cc68fd315b 593 Pfam PF11893 Domain of unknown function (DUF3413) 6 251 1.7E-107 T 15-10-2018 IPR024588 Inner membrane protein YejM, N-terminal AM378_11490 9f7b9d9d4adb25db5a1ee2cc68fd315b 593 SUPERFAMILY SSF53649 256 556 2.62E-54 T 15-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 AM378_23435 3d731c1584884af8dbb05fee20679fcc 264 SUPERFAMILY SSF56219 40 255 1.07E-24 T 15-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily AM378_23435 3d731c1584884af8dbb05fee20679fcc 264 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 45 248 4.4E-7 T 15-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase AM378_23435 3d731c1584884af8dbb05fee20679fcc 264 Gene3D G3DSA:3.60.10.10 39 259 1.7E-18 T 15-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily AM378_20170 5c44ae951334de01a5aec51b27ce862b 156 Pfam PF03061 Thioesterase superfamily 59 144 2.2E-17 T 15-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 AM378_20170 5c44ae951334de01a5aec51b27ce862b 156 Gene3D G3DSA:3.10.129.10 3 156 2.0E-50 T 15-10-2018 AM378_20170 5c44ae951334de01a5aec51b27ce862b 156 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 27 154 2.2E-16 T 15-10-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 AM378_20170 5c44ae951334de01a5aec51b27ce862b 156 SUPERFAMILY SSF54637 13 155 1.15E-26 T 15-10-2018 IPR029069 HotDog domain superfamily AM378_02455 e02bec581f1fef56e018b7899ef05e01 357 SUPERFAMILY SSF49401 225 356 6.46E-13 T 15-10-2018 IPR008966 Adhesion domain superfamily AM378_02455 e02bec581f1fef56e018b7899ef05e01 357 Gene3D G3DSA:2.60.40.1090 210 356 2.9E-8 T 15-10-2018 IPR036937 Fimbrial-type adhesion domain superfamily GO:0007155|GO:0009289 AM378_02455 e02bec581f1fef56e018b7899ef05e01 357 Pfam PF00419 Fimbrial protein 200 357 6.0E-21 T 15-10-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM378_08105 04777207a994f5a30d3ffde790528717 453 Pfam PF00218 Indole-3-glycerol phosphate synthase 6 252 9.8E-98 T 15-10-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 AM378_08105 04777207a994f5a30d3ffde790528717 453 SUPERFAMILY SSF51366 4 253 1.01E-84 T 15-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 AM378_08105 04777207a994f5a30d3ffde790528717 453 Gene3D G3DSA:3.20.20.70 9 256 8.1E-185 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM378_08105 04777207a994f5a30d3ffde790528717 453 Gene3D G3DSA:3.20.20.70 257 447 8.1E-185 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM378_08105 04777207a994f5a30d3ffde790528717 453 Hamap MF_00134_B Indole-3-glycerol phosphate synthase [trpC]. 4 255 35.848 T 15-10-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 AM378_08105 04777207a994f5a30d3ffde790528717 453 ProSitePatterns PS00614 Indole-3-glycerol phosphate synthase signature. 51 69 - T 15-10-2018 IPR001468 Indole-3-glycerol phosphate synthase, conserved site GO:0004425|GO:0006568 KEGG: 00400+4.1.1.48 AM378_08105 04777207a994f5a30d3ffde790528717 453 SUPERFAMILY SSF51366 258 451 1.55E-58 T 15-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 AM378_08105 04777207a994f5a30d3ffde790528717 453 Hamap MF_00135 N-(5'-phosphoribosyl)anthranilate isomerase [trpF]. 256 453 31.507 T 15-10-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 AM378_08105 04777207a994f5a30d3ffde790528717 453 Pfam PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase 258 448 9.9E-58 T 15-10-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 AM378_22820 360f93f69f6f50652e6e28a91dadda12 453 Pfam PF08245 Mur ligase middle domain 106 294 7.2E-48 T 15-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 AM378_22820 360f93f69f6f50652e6e28a91dadda12 453 Gene3D G3DSA:3.40.1190.10 81 312 7.0E-87 T 15-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 AM378_22820 360f93f69f6f50652e6e28a91dadda12 453 SUPERFAMILY SSF53244 314 447 9.39E-38 T 15-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AM378_22820 360f93f69f6f50652e6e28a91dadda12 453 SUPERFAMILY SSF63418 1 97 1.7E-27 T 15-10-2018 IPR035911 MurE/MurF, N-terminal AM378_22820 360f93f69f6f50652e6e28a91dadda12 453 Gene3D G3DSA:3.90.190.20 313 453 1.6E-46 T 15-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AM378_22820 360f93f69f6f50652e6e28a91dadda12 453 SUPERFAMILY SSF53623 100 311 1.57E-58 T 15-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 AM378_22820 360f93f69f6f50652e6e28a91dadda12 453 Pfam PF02875 Mur ligase family, glutamate ligase domain 314 396 4.1E-14 T 15-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 AM378_22820 360f93f69f6f50652e6e28a91dadda12 453 Pfam PF01225 Mur ligase family, catalytic domain 24 90 1.5E-9 T 15-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 AM378_22820 360f93f69f6f50652e6e28a91dadda12 453 Gene3D G3DSA:3.40.1390.10 1 80 8.2E-29 T 15-10-2018 AM378_22820 360f93f69f6f50652e6e28a91dadda12 453 Hamap MF_02019 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [murF]. 4 448 34.47 T 15-10-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 AM378_22820 360f93f69f6f50652e6e28a91dadda12 453 TIGRFAM TIGR01143 murF: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 29 447 4.4E-140 T 15-10-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 AM378_10100 2d4a2d6d96e8d5b6df4248f2c47fae9b 272 Gene3D G3DSA:3.30.1150.10 143 270 2.5E-32 T 15-10-2018 AM378_10100 2d4a2d6d96e8d5b6df4248f2c47fae9b 272 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 188 267 4.2E-19 T 15-10-2018 IPR006260 TonB/TolA, C-terminal AM378_10100 2d4a2d6d96e8d5b6df4248f2c47fae9b 272 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 188 267 1.9E-15 T 15-10-2018 IPR037682 TonB, C-terminal GO:0055085 AM378_10100 2d4a2d6d96e8d5b6df4248f2c47fae9b 272 SUPERFAMILY SSF74653 151 268 5.49E-23 T 15-10-2018 AM378_13095 24b7b098b00d1c1b8377b9e92697dca7 460 SUPERFAMILY SSF47384 217 296 4.9E-15 T 15-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AM378_13095 24b7b098b00d1c1b8377b9e92697dca7 460 SUPERFAMILY SSF158472 182 230 5.62E-10 T 15-10-2018 AM378_13095 24b7b098b00d1c1b8377b9e92697dca7 460 SUPERFAMILY SSF55874 287 451 7.6E-39 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AM378_13095 24b7b098b00d1c1b8377b9e92697dca7 460 Gene3D G3DSA:1.10.287.130 179 293 9.2E-28 T 15-10-2018 AM378_13095 24b7b098b00d1c1b8377b9e92697dca7 460 SMART SM00304 181 233 7.2E-15 T 15-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AM378_13095 24b7b098b00d1c1b8377b9e92697dca7 460 SMART SM00387 343 455 3.3E-32 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AM378_13095 24b7b098b00d1c1b8377b9e92697dca7 460 Gene3D G3DSA:3.30.565.10 303 457 1.9E-37 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AM378_13095 24b7b098b00d1c1b8377b9e92697dca7 460 PRINTS PR00344 Bacterial sensor protein C-terminal signature 415 433 4.1E-10 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM378_13095 24b7b098b00d1c1b8377b9e92697dca7 460 PRINTS PR00344 Bacterial sensor protein C-terminal signature 398 408 4.1E-10 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM378_13095 24b7b098b00d1c1b8377b9e92697dca7 460 PRINTS PR00344 Bacterial sensor protein C-terminal signature 380 394 4.1E-10 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM378_13095 24b7b098b00d1c1b8377b9e92697dca7 460 Pfam PF00512 His Kinase A (phospho-acceptor) domain 234 296 1.3E-13 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM378_13095 24b7b098b00d1c1b8377b9e92697dca7 460 Pfam PF00672 HAMP domain 181 229 3.4E-13 T 15-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AM378_13095 24b7b098b00d1c1b8377b9e92697dca7 460 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 343 451 4.3E-20 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AM378_13095 24b7b098b00d1c1b8377b9e92697dca7 460 SMART SM00388 234 298 7.4E-15 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM378_22795 8f5d099e9814af94d38611b8141efa57 152 SUPERFAMILY SSF89447 1 138 3.66E-46 T 15-10-2018 IPR037914 SpoVT-AbrB domain superfamily AM378_22795 8f5d099e9814af94d38611b8141efa57 152 ProDom PD006745 MRAZ YABB DIVISION CELL 3D-STRUCTURE UNCHARACTERIZED BCR SIMILAR PROTEIN 1 141 1.0E-76 T 15-10-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 AM378_22795 8f5d099e9814af94d38611b8141efa57 152 Hamap MF_01008 Transcriptional regulator MraZ [mraZ]. 1 152 58.3 T 15-10-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 AM378_22795 8f5d099e9814af94d38611b8141efa57 152 Gene3D G3DSA:2.40.330.20 1 150 6.8E-44 T 15-10-2018 IPR038619 MraZ superfamily AM378_22795 8f5d099e9814af94d38611b8141efa57 152 Pfam PF02381 MraZ protein, putative antitoxin-like 77 142 6.0E-21 T 15-10-2018 IPR020603 MraZ domain AM378_22795 8f5d099e9814af94d38611b8141efa57 152 Pfam PF02381 MraZ protein, putative antitoxin-like 1 75 7.9E-24 T 15-10-2018 IPR020603 MraZ domain AM378_22795 8f5d099e9814af94d38611b8141efa57 152 TIGRFAM TIGR00242 TIGR00242: division/cell wall cluster transcriptional repressor MraZ 1 152 4.4E-64 T 15-10-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 AM378_21150 ab71021300b57111ff0223661063ac51 206 Gene3D G3DSA:1.10.287.460 5 68 9.8E-19 T 15-10-2018 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily GO:0006457 AM378_21150 ab71021300b57111ff0223661063ac51 206 Gene3D G3DSA:3.10.50.40 69 206 8.7E-49 T 15-10-2018 AM378_21150 ab71021300b57111ff0223661063ac51 206 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 3 108 1.1E-21 T 15-10-2018 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 AM378_21150 ab71021300b57111ff0223661063ac51 206 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 116 203 6.0E-26 T 15-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain AM378_21150 ab71021300b57111ff0223661063ac51 206 SUPERFAMILY SSF54534 8 205 1.06E-53 T 15-10-2018 AM378_10115 3ce3c1f4bb288e92bb5ba529f113475e 811 Pfam PF07660 Secretin and TonB N terminus short domain 48 94 9.1E-9 T 15-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 AM378_10115 3ce3c1f4bb288e92bb5ba529f113475e 811 Pfam PF07715 TonB-dependent Receptor Plug Domain 117 219 4.4E-16 T 15-10-2018 IPR012910 TonB-dependent receptor, plug domain AM378_10115 3ce3c1f4bb288e92bb5ba529f113475e 811 Gene3D G3DSA:2.170.130.10 115 230 1.2E-28 T 15-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily AM378_10115 3ce3c1f4bb288e92bb5ba529f113475e 811 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 794 811 - T 15-10-2018 IPR010917 TonB-dependent receptor, conserved site AM378_10115 3ce3c1f4bb288e92bb5ba529f113475e 811 Gene3D G3DSA:3.55.50.30 25 94 1.9E-19 T 15-10-2018 AM378_10115 3ce3c1f4bb288e92bb5ba529f113475e 811 Gene3D G3DSA:2.40.170.20 231 811 6.0E-99 T 15-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AM378_10115 3ce3c1f4bb288e92bb5ba529f113475e 811 SMART SM00965 46 96 2.1E-8 T 15-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 AM378_10115 3ce3c1f4bb288e92bb5ba529f113475e 811 Pfam PF00593 TonB dependent receptor 328 809 9.9E-47 T 15-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel AM378_10115 3ce3c1f4bb288e92bb5ba529f113475e 811 TIGRFAM TIGR01785 TonB-hemin: TonB-dependent heme/hemoglobin receptor family protein 114 811 3.4E-147 T 15-10-2018 IPR011276 TonB-dependent haem/haemoglobin receptor GO:0015232|GO:0015886|GO:0019867 AM378_10115 3ce3c1f4bb288e92bb5ba529f113475e 811 SUPERFAMILY SSF56935 105 811 1.07E-91 T 15-10-2018 AM378_10115 3ce3c1f4bb288e92bb5ba529f113475e 811 TIGRFAM TIGR01786 TonB-hemlactrns: TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein 115 811 1.3E-118 T 15-10-2018 IPR010949 TonB-dependent haemoglobin/transferrin/lactoferrin receptor GO:0019867|GO:0022857|GO:0055085 AM378_18665 da0ea866f6226cf2ae7106674a1cde49 334 SUPERFAMILY SSF51735 2 180 2.58E-47 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily AM378_18665 da0ea866f6226cf2ae7106674a1cde49 334 Gene3D G3DSA:3.30.360.10 153 312 3.1E-128 T 15-10-2018 AM378_18665 da0ea866f6226cf2ae7106674a1cde49 334 TIGRFAM TIGR01850 argC: N-acetyl-gamma-glutamyl-phosphate reductase 3 333 3.7E-126 T 15-10-2018 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 AM378_18665 da0ea866f6226cf2ae7106674a1cde49 334 Gene3D G3DSA:3.40.50.720 6 330 3.1E-128 T 15-10-2018 AM378_18665 da0ea866f6226cf2ae7106674a1cde49 334 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 163 311 2.8E-17 T 15-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 AM378_18665 da0ea866f6226cf2ae7106674a1cde49 334 SMART SM00859 3 146 1.4E-52 T 15-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 AM378_18665 da0ea866f6226cf2ae7106674a1cde49 334 SUPERFAMILY SSF55347 154 308 4.21E-50 T 15-10-2018 AM378_18665 da0ea866f6226cf2ae7106674a1cde49 334 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 5 146 8.5E-34 T 15-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 AM378_18665 da0ea866f6226cf2ae7106674a1cde49 334 Hamap MF_00150 N-acetyl-gamma-glutamyl-phosphate reductase [argC]. 2 334 39.591 T 15-10-2018 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 AM378_18665 da0ea866f6226cf2ae7106674a1cde49 334 ProSitePatterns PS01224 N-acetyl-gamma-glutamyl-phosphate reductase active site. 149 165 - T 15-10-2018 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site GO:0003942|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 AM378_09545 830e7fde77d3f69a6ee1d9ced571ff34 413 Gene3D G3DSA:1.20.58.1830 2 62 3.5E-10 T 15-10-2018 AM378_09545 830e7fde77d3f69a6ee1d9ced571ff34 413 Gene3D G3DSA:3.30.70.3070 164 311 2.1E-59 T 15-10-2018 AM378_09545 830e7fde77d3f69a6ee1d9ced571ff34 413 Pfam PF08884 Flagellin D3 domain 251 329 8.3E-5 T 15-10-2018 IPR014981 Flagellin D3 AM378_09545 830e7fde77d3f69a6ee1d9ced571ff34 413 SUPERFAMILY SSF64518 1 413 1.23E-104 T 15-10-2018 AM378_09545 830e7fde77d3f69a6ee1d9ced571ff34 413 PRINTS PR00207 Flagellin signature 37 54 3.4E-29 T 15-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 AM378_09545 830e7fde77d3f69a6ee1d9ced571ff34 413 PRINTS PR00207 Flagellin signature 76 95 3.4E-29 T 15-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 AM378_09545 830e7fde77d3f69a6ee1d9ced571ff34 413 PRINTS PR00207 Flagellin signature 111 134 3.4E-29 T 15-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 AM378_09545 830e7fde77d3f69a6ee1d9ced571ff34 413 Pfam PF00700 Bacterial flagellin C-terminal helical region 328 412 3.7E-29 T 15-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 AM378_09545 830e7fde77d3f69a6ee1d9ced571ff34 413 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 141 1.9E-45 T 15-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 AM378_09545 830e7fde77d3f69a6ee1d9ced571ff34 413 Gene3D G3DSA:1.20.1330.10 63 358 2.1E-59 T 15-10-2018 AM378_09545 830e7fde77d3f69a6ee1d9ced571ff34 413 Gene3D G3DSA:1.10.8.410 361 413 1.0E-21 T 15-10-2018 AM378_00640 6918640889ebe4ac69c1004a7378225e 355 Pfam PF00990 Diguanylate cyclase, GGDEF domain 191 346 1.7E-43 T 15-10-2018 IPR000160 GGDEF domain AM378_00640 6918640889ebe4ac69c1004a7378225e 355 SMART SM00267 179 350 4.2E-57 T 15-10-2018 IPR000160 GGDEF domain AM378_00640 6918640889ebe4ac69c1004a7378225e 355 Gene3D G3DSA:3.30.70.270 175 350 8.0E-52 T 15-10-2018 AM378_00640 6918640889ebe4ac69c1004a7378225e 355 Pfam PF05230 MASE2 domain 20 107 5.5E-32 T 15-10-2018 IPR007894 MASE2 AM378_00640 6918640889ebe4ac69c1004a7378225e 355 SUPERFAMILY SSF55073 195 348 5.49E-45 T 15-10-2018 IPR029787 Nucleotide cyclase AM378_00640 6918640889ebe4ac69c1004a7378225e 355 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 186 349 1.6E-53 T 15-10-2018 IPR000160 GGDEF domain AM378_09150 fda21b268be7a40525b269875480e585 301 Pfam PF00535 Glycosyl transferase family 2 4 150 2.5E-20 T 15-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 AM378_09150 fda21b268be7a40525b269875480e585 301 SUPERFAMILY SSF53448 3 193 6.14E-31 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AM378_09150 fda21b268be7a40525b269875480e585 301 Gene3D G3DSA:3.90.550.10 2 197 1.5E-28 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AM378_13190 2a40fc6ad610f472bb33fccc873b6211 141 Pfam PF13508 Acetyltransferase (GNAT) domain 46 121 4.6E-13 T 15-10-2018 IPR000182 GNAT domain AM378_13190 2a40fc6ad610f472bb33fccc873b6211 141 Gene3D G3DSA:3.40.630.30 1 135 8.1E-25 T 15-10-2018 AM378_13190 2a40fc6ad610f472bb33fccc873b6211 141 SUPERFAMILY SSF55729 1 126 3.26E-25 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase AM378_22770 9b82024442eff597e60a3c0a82b774d9 602 ProSitePatterns PS00455 Putative AMP-binding domain signature. 186 197 - T 15-10-2018 IPR020845 AMP-binding, conserved site AM378_22770 9b82024442eff597e60a3c0a82b774d9 602 Gene3D G3DSA:3.40.50.12780 323 465 3.6E-35 T 15-10-2018 AM378_22770 9b82024442eff597e60a3c0a82b774d9 602 SUPERFAMILY SSF56801 8 599 1.96E-112 T 15-10-2018 AM378_22770 9b82024442eff597e60a3c0a82b774d9 602 Pfam PF00501 AMP-binding enzyme 15 469 2.0E-92 T 15-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 AM378_22770 9b82024442eff597e60a3c0a82b774d9 602 Gene3D G3DSA:3.40.50.12780 4 315 1.2E-55 T 15-10-2018 AM378_19250 09dac49c167c064e3cc954c6855884fb 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 7 23 1.6E-11 T 15-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 AM378_19250 09dac49c167c064e3cc954c6855884fb 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 34 53 1.6E-11 T 15-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 AM378_19250 09dac49c167c064e3cc954c6855884fb 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 23 34 1.6E-11 T 15-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 AM378_19250 09dac49c167c064e3cc954c6855884fb 153 SUPERFAMILY SSF46785 5 67 1.14E-19 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM378_19250 09dac49c167c064e3cc954c6855884fb 153 ProSitePatterns PS00519 AsnC-type HTH domain signature. 25 51 - T 15-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site AM378_19250 09dac49c167c064e3cc954c6855884fb 153 Pfam PF01037 Lrp/AsnC ligand binding domain 77 144 4.3E-17 T 15-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain AM378_19250 09dac49c167c064e3cc954c6855884fb 153 Gene3D G3DSA:3.30.70.920 59 141 1.8E-35 T 15-10-2018 AM378_19250 09dac49c167c064e3cc954c6855884fb 153 SUPERFAMILY SSF54909 68 153 2.28E-19 T 15-10-2018 IPR011008 Dimeric alpha-beta barrel AM378_19250 09dac49c167c064e3cc954c6855884fb 153 Pfam PF13412 Winged helix-turn-helix DNA-binding 8 54 2.0E-13 T 15-10-2018 AM378_19250 09dac49c167c064e3cc954c6855884fb 153 Gene3D G3DSA:1.10.10.10 3 58 8.5E-25 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_19250 09dac49c167c064e3cc954c6855884fb 153 SMART SM00344 7 114 2.4E-44 T 15-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 AM378_22465 e93b33ed7f8a005e8fe331788284adcb 819 Pfam PF00696 Amino acid kinase family 2 284 1.1E-44 T 15-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 AM378_22465 e93b33ed7f8a005e8fe331788284adcb 819 SUPERFAMILY SSF55021 383 476 6.7E-21 T 15-10-2018 AM378_22465 e93b33ed7f8a005e8fe331788284adcb 819 SUPERFAMILY SSF51735 464 636 2.73E-39 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily AM378_22465 e93b33ed7f8a005e8fe331788284adcb 819 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 472 605 4.2E-29 T 15-10-2018 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 AM378_22465 e93b33ed7f8a005e8fe331788284adcb 819 PIRSF PIRSF000727 1 817 0.0 T 15-10-2018 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I GO:0004072|GO:0004412|GO:0009067|GO:0055114 KEGG: 00260+1.1.1.3+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+1.1.1.3+2.7.2.4|KEGG: 00300+1.1.1.3+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 AM378_22465 e93b33ed7f8a005e8fe331788284adcb 819 SUPERFAMILY SSF53633 1 298 1.7E-73 T 15-10-2018 IPR036393 Acetylglutamate kinase-like superfamily AM378_22465 e93b33ed7f8a005e8fe331788284adcb 819 SUPERFAMILY SSF55021 304 381 2.29E-23 T 15-10-2018 AM378_22465 e93b33ed7f8a005e8fe331788284adcb 819 Gene3D G3DSA:3.30.360.10 625 795 3.9E-119 T 15-10-2018 AM378_22465 e93b33ed7f8a005e8fe331788284adcb 819 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 3 460 1.5E-143 T 15-10-2018 IPR001341 Aspartate kinase GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 AM378_22465 e93b33ed7f8a005e8fe331788284adcb 819 Gene3D G3DSA:3.40.1160.10 1 299 1.7E-84 T 15-10-2018 IPR036393 Acetylglutamate kinase-like superfamily AM378_22465 e93b33ed7f8a005e8fe331788284adcb 819 Pfam PF13840 ACT domain 394 450 9.4E-8 T 15-10-2018 IPR027795 CASTOR, ACT domain AM378_22465 e93b33ed7f8a005e8fe331788284adcb 819 SUPERFAMILY SSF55347 614 797 1.18E-51 T 15-10-2018 AM378_22465 e93b33ed7f8a005e8fe331788284adcb 819 Gene3D G3DSA:3.30.2130.10 302 464 2.4E-47 T 15-10-2018 AM378_22465 e93b33ed7f8a005e8fe331788284adcb 819 ProSitePatterns PS00324 Aspartokinase signature. 3 11 - T 15-10-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 AM378_22465 e93b33ed7f8a005e8fe331788284adcb 819 Gene3D G3DSA:3.40.50.720 466 811 3.9E-119 T 15-10-2018 AM378_22465 e93b33ed7f8a005e8fe331788284adcb 819 Pfam PF00742 Homoserine dehydrogenase 614 810 2.7E-48 T 15-10-2018 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 AM378_22465 e93b33ed7f8a005e8fe331788284adcb 819 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 660 682 - T 15-10-2018 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 AM378_22465 e93b33ed7f8a005e8fe331788284adcb 819 Pfam PF01842 ACT domain 324 376 6.5E-9 T 15-10-2018 IPR002912 ACT domain AM378_12295 a776bab82ec009cd991fc58d55b3d33f 146 TIGRFAM TIGR03940 PGA_PgaD: poly-beta-1,6-N-acetyl-D-glucosamine biosynthesis protein PgaD 11 128 1.8E-16 T 15-10-2018 IPR023829 Poly-beta-1,6-N-acetyl-D-glucosamine biosynthesis protein PgaD GO:0043709 AM378_12295 a776bab82ec009cd991fc58d55b3d33f 146 ProDom PD460230 MEMBRANE STORAGE INNER HAEMIN SYSTEM HMSS PGA BIOFILM PGAD TRANSMEMBRANE 1 110 2.0E-12 T 15-10-2018 AM378_12295 a776bab82ec009cd991fc58d55b3d33f 146 Pfam PF13994 PgaD-like protein 5 125 1.2E-20 T 15-10-2018 IPR023829 Poly-beta-1,6-N-acetyl-D-glucosamine biosynthesis protein PgaD GO:0043709 AM378_00215 35b5ce4e7ab367b9eb8d878396fb1bbe 1048 Gene3D G3DSA:3.30.2090.10 725 813 0.0 T 15-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AM378_00215 35b5ce4e7ab367b9eb8d878396fb1bbe 1048 Pfam PF00873 AcrB/AcrD/AcrF family 1 1029 0.0 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AM378_00215 35b5ce4e7ab367b9eb8d878396fb1bbe 1048 Gene3D G3DSA:1.20.1640.10 8 515 0.0 T 15-10-2018 AM378_00215 35b5ce4e7ab367b9eb8d878396fb1bbe 1048 Gene3D G3DSA:1.20.1640.10 516 1026 0.0 T 15-10-2018 AM378_00215 35b5ce4e7ab367b9eb8d878396fb1bbe 1048 SUPERFAMILY SSF82693 135 330 6.02E-27 T 15-10-2018 AM378_00215 35b5ce4e7ab367b9eb8d878396fb1bbe 1048 Gene3D G3DSA:3.30.70.1320 133 330 0.0 T 15-10-2018 AM378_00215 35b5ce4e7ab367b9eb8d878396fb1bbe 1048 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 1 1047 0.0 T 15-10-2018 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0006855|GO:0015562|GO:0016021 AM378_00215 35b5ce4e7ab367b9eb8d878396fb1bbe 1048 SUPERFAMILY SSF82693 38 132 1.2E-27 T 15-10-2018 AM378_00215 35b5ce4e7ab367b9eb8d878396fb1bbe 1048 Gene3D G3DSA:3.30.70.1430 38 821 0.0 T 15-10-2018 AM378_00215 35b5ce4e7ab367b9eb8d878396fb1bbe 1048 SUPERFAMILY SSF82866 296 497 7.06E-49 T 15-10-2018 AM378_00215 35b5ce4e7ab367b9eb8d878396fb1bbe 1048 SUPERFAMILY SSF82866 807 1034 1.57E-45 T 15-10-2018 AM378_00215 35b5ce4e7ab367b9eb8d878396fb1bbe 1048 SUPERFAMILY SSF82714 182 272 7.06E-22 T 15-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AM378_00215 35b5ce4e7ab367b9eb8d878396fb1bbe 1048 Gene3D G3DSA:3.30.70.1440 675 865 0.0 T 15-10-2018 AM378_00215 35b5ce4e7ab367b9eb8d878396fb1bbe 1048 SUPERFAMILY SSF82693 566 670 9.42E-32 T 15-10-2018 AM378_00215 35b5ce4e7ab367b9eb8d878396fb1bbe 1048 Gene3D G3DSA:3.30.2090.10 180 277 0.0 T 15-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AM378_00215 35b5ce4e7ab367b9eb8d878396fb1bbe 1048 Gene3D G3DSA:3.30.70.1430 570 674 0.0 T 15-10-2018 AM378_00215 35b5ce4e7ab367b9eb8d878396fb1bbe 1048 SUPERFAMILY SSF82714 724 811 1.83E-21 T 15-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AM378_00215 35b5ce4e7ab367b9eb8d878396fb1bbe 1048 PRINTS PR00702 Acriflavin resistance protein family signature 336 359 2.6E-115 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AM378_00215 35b5ce4e7ab367b9eb8d878396fb1bbe 1048 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 2.6E-115 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AM378_00215 35b5ce4e7ab367b9eb8d878396fb1bbe 1048 PRINTS PR00702 Acriflavin resistance protein family signature 622 636 2.6E-115 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AM378_00215 35b5ce4e7ab367b9eb8d878396fb1bbe 1048 PRINTS PR00702 Acriflavin resistance protein family signature 470 493 2.6E-115 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AM378_00215 35b5ce4e7ab367b9eb8d878396fb1bbe 1048 PRINTS PR00702 Acriflavin resistance protein family signature 553 570 2.6E-115 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AM378_00215 35b5ce4e7ab367b9eb8d878396fb1bbe 1048 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 2.6E-115 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AM378_00215 35b5ce4e7ab367b9eb8d878396fb1bbe 1048 PRINTS PR00702 Acriflavin resistance protein family signature 391 415 2.6E-115 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AM378_00215 35b5ce4e7ab367b9eb8d878396fb1bbe 1048 PRINTS PR00702 Acriflavin resistance protein family signature 363 384 2.6E-115 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AM378_00215 35b5ce4e7ab367b9eb8d878396fb1bbe 1048 PRINTS PR00702 Acriflavin resistance protein family signature 445 468 2.6E-115 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AM378_15450 7429e0cb70fd41e70203e77b87477de8 218 Gene3D G3DSA:3.40.1050.10 1 217 1.6E-90 T 15-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 AM378_15450 7429e0cb70fd41e70203e77b87477de8 218 SMART SM00947 30 192 1.2E-67 T 15-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 AM378_15450 7429e0cb70fd41e70203e77b87477de8 218 SUPERFAMILY SSF53056 1 211 7.19E-76 T 15-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 AM378_15450 7429e0cb70fd41e70203e77b87477de8 218 Pfam PF00484 Carbonic anhydrase 38 188 2.5E-50 T 15-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 AM378_15450 7429e0cb70fd41e70203e77b87477de8 218 ProSitePatterns PS00705 Prokaryotic-type carbonic anhydrases signature 2. 82 102 - T 15-10-2018 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 AM378_15450 7429e0cb70fd41e70203e77b87477de8 218 ProSitePatterns PS00704 Prokaryotic-type carbonic anhydrases signature 1. 42 49 - T 15-10-2018 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 AM378_17825 223a54596d7bfdc0ef12acb32959857c 173 Hamap MF_00109 Shikimate kinase [aroK]. 4 171 29.478 T 15-10-2018 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 AM378_17825 223a54596d7bfdc0ef12acb32959857c 173 SUPERFAMILY SSF52540 4 170 7.83E-35 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_17825 223a54596d7bfdc0ef12acb32959857c 173 Gene3D G3DSA:3.40.50.300 1 173 1.7E-58 T 15-10-2018 AM378_17825 223a54596d7bfdc0ef12acb32959857c 173 Pfam PF01202 Shikimate kinase 13 170 7.5E-57 T 15-10-2018 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 AM378_17825 223a54596d7bfdc0ef12acb32959857c 173 PRINTS PR01100 Shikimate kinase family signature 59 67 4.3E-29 T 15-10-2018 AM378_17825 223a54596d7bfdc0ef12acb32959857c 173 PRINTS PR01100 Shikimate kinase family signature 31 44 4.3E-29 T 15-10-2018 AM378_17825 223a54596d7bfdc0ef12acb32959857c 173 PRINTS PR01100 Shikimate kinase family signature 98 115 4.3E-29 T 15-10-2018 AM378_17825 223a54596d7bfdc0ef12acb32959857c 173 PRINTS PR01100 Shikimate kinase family signature 7 22 4.3E-29 T 15-10-2018 AM378_17825 223a54596d7bfdc0ef12acb32959857c 173 PRINTS PR01100 Shikimate kinase family signature 77 86 4.3E-29 T 15-10-2018 AM378_17825 223a54596d7bfdc0ef12acb32959857c 173 ProSitePatterns PS01128 Shikimate kinase signature. 60 85 - T 15-10-2018 IPR023000 Shikimate kinase, conserved site KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 AM378_11840 9b24d65f117411e603b56bb57d08ad37 400 Gene3D G3DSA:3.30.420.40 199 400 1.2E-85 T 15-10-2018 AM378_11840 9b24d65f117411e603b56bb57d08ad37 400 TIGRFAM TIGR00016 ackA: acetate kinase 1 399 1.4E-180 T 15-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AM378_11840 9b24d65f117411e603b56bb57d08ad37 400 PIRSF PIRSF000722 2 400 2.5E-142 T 15-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AM378_11840 9b24d65f117411e603b56bb57d08ad37 400 SUPERFAMILY SSF53067 160 398 4.71E-83 T 15-10-2018 AM378_11840 9b24d65f117411e603b56bb57d08ad37 400 Pfam PF00871 Acetokinase family 6 393 8.1E-173 T 15-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AM378_11840 9b24d65f117411e603b56bb57d08ad37 400 Hamap MF_00020 Acetate kinase [ackA]. 1 400 186.118 T 15-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AM378_11840 9b24d65f117411e603b56bb57d08ad37 400 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 6 17 - T 15-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AM378_11840 9b24d65f117411e603b56bb57d08ad37 400 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 206 223 - T 15-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AM378_11840 9b24d65f117411e603b56bb57d08ad37 400 SUPERFAMILY SSF53067 4 199 1.81E-62 T 15-10-2018 AM378_11840 9b24d65f117411e603b56bb57d08ad37 400 PRINTS PR00471 Acetate kinase family signature 380 392 2.4E-47 T 15-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AM378_11840 9b24d65f117411e603b56bb57d08ad37 400 PRINTS PR00471 Acetate kinase family signature 6 17 2.4E-47 T 15-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AM378_11840 9b24d65f117411e603b56bb57d08ad37 400 PRINTS PR00471 Acetate kinase family signature 206 227 2.4E-47 T 15-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AM378_11840 9b24d65f117411e603b56bb57d08ad37 400 PRINTS PR00471 Acetate kinase family signature 302 315 2.4E-47 T 15-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AM378_11840 9b24d65f117411e603b56bb57d08ad37 400 PRINTS PR00471 Acetate kinase family signature 176 189 2.4E-47 T 15-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AM378_11840 9b24d65f117411e603b56bb57d08ad37 400 PRINTS PR00471 Acetate kinase family signature 325 341 2.4E-47 T 15-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AM378_11840 9b24d65f117411e603b56bb57d08ad37 400 Gene3D G3DSA:3.30.420.40 3 198 4.3E-77 T 15-10-2018 AM378_04525 437dab5ad371ea636162a92cf93379c4 217 Pfam PF04391 Protein of unknown function (DUF533) 30 209 9.5E-53 T 15-10-2018 IPR007486 Inner membrane protein YebE AM378_04525 437dab5ad371ea636162a92cf93379c4 217 SUPERFAMILY SSF158682 69 206 5.89E-18 T 15-10-2018 IPR029024 TerB-like AM378_04525 437dab5ad371ea636162a92cf93379c4 217 Gene3D G3DSA:1.10.3680.10 77 216 9.2E-11 T 15-10-2018 IPR029024 TerB-like AM378_06745 508eaa1e0693ab1e5b9c1c4ebb30b296 429 Gene3D G3DSA:3.60.15.10 141 427 2.5E-91 T 15-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AM378_06745 508eaa1e0693ab1e5b9c1c4ebb30b296 429 Pfam PF00753 Metallo-beta-lactamase superfamily 160 346 1.1E-19 T 15-10-2018 IPR001279 Metallo-beta-lactamase AM378_06745 508eaa1e0693ab1e5b9c1c4ebb30b296 429 Pfam PF04273 Putative phosphatase (DUF442) 3 109 8.8E-19 T 15-10-2018 IPR005939 Beta-lactamase hydrolase-like GO:0016787 AM378_06745 508eaa1e0693ab1e5b9c1c4ebb30b296 429 Gene3D G3DSA:3.90.190.10 1 136 1.9E-27 T 15-10-2018 IPR029021 Protein-tyrosine phosphatase-like AM378_06745 508eaa1e0693ab1e5b9c1c4ebb30b296 429 SMART SM00849 157 346 1.9E-18 T 15-10-2018 IPR001279 Metallo-beta-lactamase AM378_06745 508eaa1e0693ab1e5b9c1c4ebb30b296 429 SUPERFAMILY SSF56281 152 392 1.26E-42 T 15-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AM378_06745 508eaa1e0693ab1e5b9c1c4ebb30b296 429 SUPERFAMILY SSF52799 8 141 1.44E-9 T 15-10-2018 IPR029021 Protein-tyrosine phosphatase-like AM378_18770 89313702beb1e8ee56a5541511bbbe92 248 SUPERFAMILY SSF52343 103 248 1.06E-38 T 15-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AM378_18770 89313702beb1e8ee56a5541511bbbe92 248 Pfam PF00175 Oxidoreductase NAD-binding domain 111 222 1.5E-18 T 15-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 AM378_18770 89313702beb1e8ee56a5541511bbbe92 248 Pfam PF00970 Oxidoreductase FAD-binding domain 29 90 3.8E-7 T 15-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 AM378_18770 89313702beb1e8ee56a5541511bbbe92 248 Gene3D G3DSA:2.40.30.10 1 96 6.5E-31 T 15-10-2018 AM378_18770 89313702beb1e8ee56a5541511bbbe92 248 Gene3D G3DSA:3.40.50.80 97 248 5.3E-40 T 15-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AM378_18770 89313702beb1e8ee56a5541511bbbe92 248 SUPERFAMILY SSF63380 3 99 8.78E-24 T 15-10-2018 IPR017938 Riboflavin synthase-like beta-barrel AM378_03840 26c627d46ba6d8adba6dae8333e97ce4 309 Gene3D G3DSA:1.10.10.10 2 91 1.4E-21 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_03840 26c627d46ba6d8adba6dae8333e97ce4 309 Gene3D G3DSA:3.40.190.10 92 291 1.2E-49 T 15-10-2018 AM378_03840 26c627d46ba6d8adba6dae8333e97ce4 309 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 4.9E-13 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_03840 26c627d46ba6d8adba6dae8333e97ce4 309 SUPERFAMILY SSF53850 88 299 3.44E-36 T 15-10-2018 AM378_03840 26c627d46ba6d8adba6dae8333e97ce4 309 Pfam PF03466 LysR substrate binding domain 88 296 1.4E-34 T 15-10-2018 IPR005119 LysR, substrate-binding AM378_03840 26c627d46ba6d8adba6dae8333e97ce4 309 Gene3D G3DSA:3.40.190.10 165 267 1.2E-49 T 15-10-2018 AM378_03840 26c627d46ba6d8adba6dae8333e97ce4 309 SUPERFAMILY SSF46785 3 88 1.79E-15 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM378_00830 7d3ea668cb432f842812b27f931a2199 250 SUPERFAMILY SSF56784 1 247 2.07E-66 T 15-10-2018 IPR036412 HAD-like superfamily AM378_00830 7d3ea668cb432f842812b27f931a2199 250 Gene3D G3DSA:3.40.50.1000 71 174 1.1E-84 T 15-10-2018 IPR023214 HAD superfamily AM378_00830 7d3ea668cb432f842812b27f931a2199 250 Gene3D G3DSA:3.40.50.1000 6 232 1.1E-84 T 15-10-2018 IPR023214 HAD superfamily AM378_00830 7d3ea668cb432f842812b27f931a2199 250 Pfam PF13344 Haloacid dehalogenase-like hydrolase 6 105 2.4E-23 T 15-10-2018 IPR006357 HAD-superfamily hydrolase, subfamily IIA AM378_00830 7d3ea668cb432f842812b27f931a2199 250 Pfam PF13242 HAD-hyrolase-like 174 246 1.2E-20 T 15-10-2018 AM378_00830 7d3ea668cb432f842812b27f931a2199 250 TIGRFAM TIGR01460 HAD-SF-IIA: HAD hydrolase, family IIA 6 223 1.9E-62 T 15-10-2018 IPR006357 HAD-superfamily hydrolase, subfamily IIA AM378_05705 9b986270d14bff43749aa33dc1f4a5a8 248 SMART SM00382 26 223 3.4E-8 T 15-10-2018 IPR003593 AAA+ ATPase domain AM378_05705 9b986270d14bff43749aa33dc1f4a5a8 248 TIGRFAM TIGR01978 sufC: FeS assembly ATPase SufC 2 244 9.3E-113 T 15-10-2018 IPR010230 FeS cluster assembly SUF system, ATPase SufC GO:0005524 AM378_05705 9b986270d14bff43749aa33dc1f4a5a8 248 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM378_05705 9b986270d14bff43749aa33dc1f4a5a8 248 Pfam PF00005 ABC transporter 17 172 3.7E-21 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM378_05705 9b986270d14bff43749aa33dc1f4a5a8 248 SUPERFAMILY SSF52540 2 231 2.61E-43 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_05705 9b986270d14bff43749aa33dc1f4a5a8 248 Gene3D G3DSA:3.40.50.300 1 248 3.9E-67 T 15-10-2018 AM378_03360 a9bc8e36d47b7f8f4e8fc6e5fff29e51 371 SUPERFAMILY SSF111369 53 299 1.7E-27 T 15-10-2018 AM378_03360 a9bc8e36d47b7f8f4e8fc6e5fff29e51 371 Gene3D G3DSA:2.40.50.100 61 223 1.3E-89 T 15-10-2018 AM378_03360 a9bc8e36d47b7f8f4e8fc6e5fff29e51 371 Gene3D G3DSA:2.40.420.20 46 363 1.3E-89 T 15-10-2018 AM378_03360 a9bc8e36d47b7f8f4e8fc6e5fff29e51 371 Gene3D G3DSA:1.10.287.470 95 186 1.3E-89 T 15-10-2018 AM378_03360 a9bc8e36d47b7f8f4e8fc6e5fff29e51 371 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 51 295 8.5E-19 T 15-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AM378_03360 a9bc8e36d47b7f8f4e8fc6e5fff29e51 371 Gene3D G3DSA:2.40.30.170 50 302 1.3E-89 T 15-10-2018 AM378_03360 a9bc8e36d47b7f8f4e8fc6e5fff29e51 371 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 38 364 9.5E-59 T 15-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AM378_08845 b1065c963ae51599b92e81150df662c6 333 SUPERFAMILY SSF53448 5 226 2.44E-50 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AM378_08845 b1065c963ae51599b92e81150df662c6 333 Pfam PF00535 Glycosyl transferase family 2 6 131 3.1E-33 T 15-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 AM378_08845 b1065c963ae51599b92e81150df662c6 333 Gene3D G3DSA:3.90.550.10 4 206 2.5E-47 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AM378_03675 60aba7684c57de16f6868e7a2141ed0a 186 Pfam PF03886 ABC-type transport auxiliary lipoprotein component 25 180 3.0E-41 T 15-10-2018 IPR005586 ABC-type transport auxiliary lipoprotein component AM378_03675 60aba7684c57de16f6868e7a2141ed0a 186 Gene3D G3DSA:3.40.50.10610 13 182 9.6E-6 T 15-10-2018 AM378_03675 60aba7684c57de16f6868e7a2141ed0a 186 SUPERFAMILY SSF159594 23 183 3.92E-30 T 15-10-2018 AM378_22360 1d3a15bb1ae2f44c556bef010a88fdab 461 Hamap MF_01498 DNA repair protein RadA [radA]. 22 458 42.97 T 15-10-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 AM378_22360 1d3a15bb1ae2f44c556bef010a88fdab 461 Gene3D G3DSA:3.40.50.300 70 282 4.7E-38 T 15-10-2018 AM378_22360 1d3a15bb1ae2f44c556bef010a88fdab 461 Pfam PF13481 AAA domain 88 225 1.5E-13 T 15-10-2018 AM378_22360 1d3a15bb1ae2f44c556bef010a88fdab 461 PRINTS PR01874 DNA repair protein radA signature 177 201 1.6E-93 T 15-10-2018 AM378_22360 1d3a15bb1ae2f44c556bef010a88fdab 461 PRINTS PR01874 DNA repair protein radA signature 216 244 1.6E-93 T 15-10-2018 AM378_22360 1d3a15bb1ae2f44c556bef010a88fdab 461 PRINTS PR01874 DNA repair protein radA signature 127 144 1.6E-93 T 15-10-2018 AM378_22360 1d3a15bb1ae2f44c556bef010a88fdab 461 PRINTS PR01874 DNA repair protein radA signature 325 348 1.6E-93 T 15-10-2018 AM378_22360 1d3a15bb1ae2f44c556bef010a88fdab 461 PRINTS PR01874 DNA repair protein radA signature 11 35 1.6E-93 T 15-10-2018 AM378_22360 1d3a15bb1ae2f44c556bef010a88fdab 461 PRINTS PR01874 DNA repair protein radA signature 86 114 1.6E-93 T 15-10-2018 AM378_22360 1d3a15bb1ae2f44c556bef010a88fdab 461 PRINTS PR01874 DNA repair protein radA signature 251 277 1.6E-93 T 15-10-2018 AM378_22360 1d3a15bb1ae2f44c556bef010a88fdab 461 SUPERFAMILY SSF52540 72 291 1.51E-47 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_22360 1d3a15bb1ae2f44c556bef010a88fdab 461 SUPERFAMILY SSF54211 258 457 1.25E-41 T 15-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AM378_22360 1d3a15bb1ae2f44c556bef010a88fdab 461 Gene3D G3DSA:3.30.230.10 305 460 4.6E-21 T 15-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AM378_22360 1d3a15bb1ae2f44c556bef010a88fdab 461 Pfam PF13541 Subunit ChlI of Mg-chelatase 348 433 3.8E-9 T 15-10-2018 AM378_22360 1d3a15bb1ae2f44c556bef010a88fdab 461 SMART SM00382 94 248 1.0E-8 T 15-10-2018 IPR003593 AAA+ ATPase domain AM378_22360 1d3a15bb1ae2f44c556bef010a88fdab 461 TIGRFAM TIGR00416 sms: DNA repair protein RadA 1 454 1.6E-235 T 15-10-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 AM378_20975 b68d4287db1f3a466ae2bff03eb5b86a 1115 Pfam PF12794 Mechanosensitive ion channel inner membrane domain 1 481 818 3.5E-115 T 15-10-2018 IPR025692 Mechanosensitive ion channel inner membrane domain 1 AM378_20975 b68d4287db1f3a466ae2bff03eb5b86a 1115 SUPERFAMILY SSF82861 838 920 8.11E-7 T 15-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 AM378_20975 b68d4287db1f3a466ae2bff03eb5b86a 1115 SUPERFAMILY SSF50182 922 987 3.6E-17 T 15-10-2018 IPR010920 LSM domain superfamily AM378_20975 b68d4287db1f3a466ae2bff03eb5b86a 1115 Gene3D G3DSA:2.30.30.60 937 986 2.4E-10 T 15-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily AM378_20975 b68d4287db1f3a466ae2bff03eb5b86a 1115 SUPERFAMILY SSF82689 990 1086 1.96E-14 T 15-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 AM378_20975 b68d4287db1f3a466ae2bff03eb5b86a 1115 Pfam PF12795 Mechanosensitive ion channel porin domain 31 262 1.1E-59 T 15-10-2018 IPR024393 Mechanosensitive ion channel MscS, porin domain AM378_20975 b68d4287db1f3a466ae2bff03eb5b86a 1115 Pfam PF00924 Mechanosensitive ion channel 879 1077 5.4E-50 T 15-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 AM378_20975 b68d4287db1f3a466ae2bff03eb5b86a 1115 Gene3D G3DSA:3.30.70.100 990 1082 6.1E-8 T 15-10-2018 AM378_07015 88375427ebfdbef98d605ec29d3e7759 126 Gene3D G3DSA:3.10.450.50 5 123 8.2E-13 T 15-10-2018 AM378_07015 88375427ebfdbef98d605ec29d3e7759 126 Pfam PF14534 Domain of unknown function (DUF4440) 11 116 2.8E-18 T 15-10-2018 IPR027843 Domain of unknown function DUF4440 AM378_07015 88375427ebfdbef98d605ec29d3e7759 126 SUPERFAMILY SSF54427 8 123 9.5E-16 T 15-10-2018 IPR032710 NTF2-like domain superfamily AM378_12710 558739a18003367d402f3674fcacd625 759 Pfam PF00390 Malic enzyme, N-terminal domain 115 151 8.4E-6 T 15-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 AM378_12710 558739a18003367d402f3674fcacd625 759 Pfam PF00390 Malic enzyme, N-terminal domain 19 114 8.1E-22 T 15-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 AM378_12710 558739a18003367d402f3674fcacd625 759 SMART SM00919 163 401 1.1E-141 T 15-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 AM378_12710 558739a18003367d402f3674fcacd625 759 SUPERFAMILY SSF53659 430 754 3.78E-91 T 15-10-2018 AM378_12710 558739a18003367d402f3674fcacd625 759 Gene3D G3DSA:3.40.50.10750 573 727 2.7E-93 T 15-10-2018 AM378_12710 558739a18003367d402f3674fcacd625 759 PIRSF PIRSF036684 1 758 0.0 T 15-10-2018 IPR012188 NAD(P)-dependent malic enzyme GO:0004470|GO:0006108|GO:0046872 KEGG: 00620+1.1.1.40|KEGG: 00710+1.1.1.40|MetaCyc: PWY-241|MetaCyc: PWY-7117 AM378_12710 558739a18003367d402f3674fcacd625 759 SUPERFAMILY SSF51735 163 453 1.81E-87 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily AM378_12710 558739a18003367d402f3674fcacd625 759 Pfam PF01515 Phosphate acetyl/butaryl transferase 430 751 4.3E-98 T 15-10-2018 IPR002505 Phosphate acetyl/butaryl transferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 AM378_12710 558739a18003367d402f3674fcacd625 759 SUPERFAMILY SSF53223 10 161 7.91E-53 T 15-10-2018 AM378_12710 558739a18003367d402f3674fcacd625 759 Pfam PF03949 Malic enzyme, NAD binding domain 165 359 6.1E-19 T 15-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 AM378_12710 558739a18003367d402f3674fcacd625 759 SMART SM01274 18 151 1.8E-80 T 15-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 AM378_12710 558739a18003367d402f3674fcacd625 759 Gene3D G3DSA:3.40.50.10380 1 160 7.4E-69 T 15-10-2018 IPR037062 Malic enzyme, N-terminal domain superfamily GO:0004471|GO:0055114 AM378_12710 558739a18003367d402f3674fcacd625 759 ProSitePatterns PS00331 Malic enzymes signature. 159 175 - T 15-10-2018 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 AM378_12710 558739a18003367d402f3674fcacd625 759 Gene3D G3DSA:3.40.50.720 161 446 1.2E-82 T 15-10-2018 AM378_12710 558739a18003367d402f3674fcacd625 759 Gene3D G3DSA:3.40.50.10950 447 751 2.7E-93 T 15-10-2018 AM378_16910 7b1386b836aa09cb92627e33290e7f7a 80 ProDom PD745092 MEMBRANE YHDT SODIUM/PANTOTHENATE TRANSMEMBRANE INNER SYMPORTER Y0210 INTEGRAL PROTEIN-LIKE PM1090 1 79 2.0E-19 T 15-10-2018 IPR010398 Protein of unknown function DUF997 AM378_16910 7b1386b836aa09cb92627e33290e7f7a 80 Pfam PF06196 Protein of unknown function (DUF997) 7 77 1.9E-29 T 15-10-2018 IPR010398 Protein of unknown function DUF997 AM378_13005 0289d0e7e1d515c977c13abbf3846818 270 SUPERFAMILY SSF52540 23 257 2.18E-58 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_13005 0289d0e7e1d515c977c13abbf3846818 270 Gene3D G3DSA:3.40.50.300 19 266 4.7E-63 T 15-10-2018 AM378_13005 0289d0e7e1d515c977c13abbf3846818 270 ProSitePatterns PS00211 ABC transporters family signature. 167 181 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM378_13005 0289d0e7e1d515c977c13abbf3846818 270 SMART SM00382 48 242 2.7E-13 T 15-10-2018 IPR003593 AAA+ ATPase domain AM378_13005 0289d0e7e1d515c977c13abbf3846818 270 Pfam PF00005 ABC transporter 39 195 6.5E-30 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM378_13005 0289d0e7e1d515c977c13abbf3846818 270 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 24 270 2.4E-118 T 15-10-2018 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 AM378_14700 e8b0f80e51f3d37202432c7abbe16123 80 SUPERFAMILY SSF47336 6 80 7.33E-14 T 15-10-2018 IPR036736 ACP-like superfamily AM378_14700 e8b0f80e51f3d37202432c7abbe16123 80 Gene3D G3DSA:1.10.1200.10 1 80 1.1E-12 T 15-10-2018 IPR036736 ACP-like superfamily AM378_14700 e8b0f80e51f3d37202432c7abbe16123 80 Pfam PF00550 Phosphopantetheine attachment site 10 76 1.7E-11 T 15-10-2018 IPR009081 Phosphopantetheine binding ACP domain AM378_17465 e48c0c4579ecb6173da341e62b7e0a1a 130 Gene3D G3DSA:3.30.1490.10 73 130 1.1E-25 T 15-10-2018 AM378_17465 e48c0c4579ecb6173da341e62b7e0a1a 130 ProSitePatterns PS00053 Ribosomal protein S8 signature. 100 117 - T 15-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM378_17465 e48c0c4579ecb6173da341e62b7e0a1a 130 Gene3D G3DSA:3.30.1370.30 2 72 1.7E-27 T 15-10-2018 AM378_17465 e48c0c4579ecb6173da341e62b7e0a1a 130 Pfam PF00410 Ribosomal protein S8 5 129 2.1E-48 T 15-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM378_17465 e48c0c4579ecb6173da341e62b7e0a1a 130 Hamap MF_01302_B 30S ribosomal protein S8 [rpsH]. 2 130 31.746 T 15-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM378_17465 e48c0c4579ecb6173da341e62b7e0a1a 130 SUPERFAMILY SSF56047 5 129 2.35E-46 T 15-10-2018 IPR035987 Ribosomal protein S8 superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM378_14165 77359b929166e076846d9b0b46fb4f3e 572 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 95 459 3.4E-49 T 15-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM378_14165 77359b929166e076846d9b0b46fb4f3e 572 Gene3D G3DSA:3.30.930.10 11 465 1.4E-241 T 15-10-2018 AM378_14165 77359b929166e076846d9b0b46fb4f3e 572 Pfam PF04073 Aminoacyl-tRNA editing domain 257 377 8.5E-26 T 15-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 AM378_14165 77359b929166e076846d9b0b46fb4f3e 572 Hamap MF_01569 Proline--tRNA ligase [proS]. 1 571 42.934 T 15-10-2018 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 AM378_14165 77359b929166e076846d9b0b46fb4f3e 572 PRINTS PR01046 Prolyl-tRNA synthetase signature 68 86 3.2E-19 T 15-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 AM378_14165 77359b929166e076846d9b0b46fb4f3e 572 PRINTS PR01046 Prolyl-tRNA synthetase signature 134 142 3.2E-19 T 15-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 AM378_14165 77359b929166e076846d9b0b46fb4f3e 572 PRINTS PR01046 Prolyl-tRNA synthetase signature 144 155 3.2E-19 T 15-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 AM378_14165 77359b929166e076846d9b0b46fb4f3e 572 PRINTS PR01046 Prolyl-tRNA synthetase signature 104 115 3.2E-19 T 15-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 AM378_14165 77359b929166e076846d9b0b46fb4f3e 572 Gene3D G3DSA:3.90.960.10 240 389 1.4E-241 T 15-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 AM378_14165 77359b929166e076846d9b0b46fb4f3e 572 SUPERFAMILY SSF55826 218 390 1.57E-31 T 15-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 AM378_14165 77359b929166e076846d9b0b46fb4f3e 572 TIGRFAM TIGR00409 proS_fam_II: proline--tRNA ligase 1 566 1.2E-271 T 15-10-2018 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 AM378_14165 77359b929166e076846d9b0b46fb4f3e 572 Gene3D G3DSA:3.40.50.800 4 554 1.4E-241 T 15-10-2018 IPR036621 Anticodon-binding domain superfamily AM378_14165 77359b929166e076846d9b0b46fb4f3e 572 Pfam PF03129 Anticodon binding domain 475 567 8.0E-20 T 15-10-2018 IPR004154 Anticodon-binding AM378_14165 77359b929166e076846d9b0b46fb4f3e 572 SUPERFAMILY SSF55681 10 478 7.56E-109 T 15-10-2018 AM378_14165 77359b929166e076846d9b0b46fb4f3e 572 SUPERFAMILY SSF52954 463 570 8.31E-33 T 15-10-2018 AM378_14165 77359b929166e076846d9b0b46fb4f3e 572 PIRSF PIRSF001535 1 572 1.5E-275 T 15-10-2018 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 AM378_18030 72969af741b3cd2f2c278b12762fc0f0 252 SUPERFAMILY SSF46785 3 73 4.05E-16 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM378_18030 72969af741b3cd2f2c278b12762fc0f0 252 Pfam PF08220 DeoR-like helix-turn-helix domain 6 61 7.0E-24 T 15-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AM378_18030 72969af741b3cd2f2c278b12762fc0f0 252 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 1.2E-12 T 15-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AM378_18030 72969af741b3cd2f2c278b12762fc0f0 252 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 1.2E-12 T 15-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AM378_18030 72969af741b3cd2f2c278b12762fc0f0 252 SMART SM00420 6 58 4.9E-26 T 15-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AM378_18030 72969af741b3cd2f2c278b12762fc0f0 252 SUPERFAMILY SSF100950 74 233 6.98E-30 T 15-10-2018 IPR037171 NagB/RpiA transferase-like AM378_18030 72969af741b3cd2f2c278b12762fc0f0 252 Gene3D G3DSA:1.10.10.10 1 58 1.0E-7 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_18030 72969af741b3cd2f2c278b12762fc0f0 252 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 15-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 AM378_18030 72969af741b3cd2f2c278b12762fc0f0 252 SMART SM01134 72 233 3.2E-71 T 15-10-2018 AM378_18030 72969af741b3cd2f2c278b12762fc0f0 252 Gene3D G3DSA:3.30.750.70 69 133 9.5E-11 T 15-10-2018 AM378_18030 72969af741b3cd2f2c278b12762fc0f0 252 Pfam PF00455 DeoR C terminal sensor domain 76 232 3.5E-54 T 15-10-2018 IPR014036 DeoR C-terminal sensor domain AM378_23005 fb3237ec26518acdf874d1abf7f45455 264 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 30 103 8.1E-27 T 15-10-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core AM378_23005 fb3237ec26518acdf874d1abf7f45455 264 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 171 232 3.4E-8 T 15-10-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core AM378_23005 fb3237ec26518acdf874d1abf7f45455 264 Gene3D G3DSA:1.10.287.1080 4 128 1.7E-46 T 15-10-2018 AM378_23005 fb3237ec26518acdf874d1abf7f45455 264 SUPERFAMILY SSF101386 6 108 2.8E-25 T 15-10-2018 AM378_23005 fb3237ec26518acdf874d1abf7f45455 264 SUPERFAMILY SSF101386 139 239 1.01E-23 T 15-10-2018 AM378_23005 fb3237ec26518acdf874d1abf7f45455 264 TIGRFAM TIGR00444 mazG: MazG family protein 13 260 8.1E-111 T 15-10-2018 IPR011551 NTP pyrophosphohydrolase MazG AM378_23005 fb3237ec26518acdf874d1abf7f45455 264 Gene3D G3DSA:1.10.287.1080 132 264 2.6E-48 T 15-10-2018 AM378_20180 1fe773f7e0f9b8aa5b02596fc844ef6e 610 SUPERFAMILY SSF47819 532 607 1.48E-25 T 15-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 AM378_20180 1fe773f7e0f9b8aa5b02596fc844ef6e 610 SMART SM00341 531 610 6.1E-26 T 15-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 AM378_20180 1fe773f7e0f9b8aa5b02596fc844ef6e 610 Pfam PF09382 RQC domain 406 517 2.3E-39 T 15-10-2018 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 AM378_20180 1fe773f7e0f9b8aa5b02596fc844ef6e 610 SMART SM00956 411 514 4.1E-55 T 15-10-2018 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 AM378_20180 1fe773f7e0f9b8aa5b02596fc844ef6e 610 Gene3D G3DSA:1.10.10.10 341 523 4.8E-53 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_20180 1fe773f7e0f9b8aa5b02596fc844ef6e 610 Gene3D G3DSA:3.40.50.300 2 208 5.6E-85 T 15-10-2018 AM378_20180 1fe773f7e0f9b8aa5b02596fc844ef6e 610 Gene3D G3DSA:1.10.150.80 524 610 1.8E-29 T 15-10-2018 AM378_20180 1fe773f7e0f9b8aa5b02596fc844ef6e 610 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 15 464 3.1E-196 T 15-10-2018 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 AM378_20180 1fe773f7e0f9b8aa5b02596fc844ef6e 610 Pfam PF00271 Helicase conserved C-terminal domain 228 330 2.1E-19 T 15-10-2018 IPR001650 Helicase, C-terminal AM378_20180 1fe773f7e0f9b8aa5b02596fc844ef6e 610 SMART SM00490 250 331 4.7E-28 T 15-10-2018 IPR001650 Helicase, C-terminal AM378_20180 1fe773f7e0f9b8aa5b02596fc844ef6e 610 SMART SM00487 22 218 7.8E-30 T 15-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AM378_20180 1fe773f7e0f9b8aa5b02596fc844ef6e 610 SUPERFAMILY SSF52540 15 198 1.52E-45 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_20180 1fe773f7e0f9b8aa5b02596fc844ef6e 610 Gene3D G3DSA:3.40.50.300 209 340 2.3E-44 T 15-10-2018 AM378_20180 1fe773f7e0f9b8aa5b02596fc844ef6e 610 Pfam PF16124 RecQ zinc-binding 343 404 1.1E-15 T 15-10-2018 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain AM378_20180 1fe773f7e0f9b8aa5b02596fc844ef6e 610 Pfam PF00270 DEAD/DEAH box helicase 28 186 9.6E-20 T 15-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AM378_20180 1fe773f7e0f9b8aa5b02596fc844ef6e 610 TIGRFAM TIGR01389 recQ: ATP-dependent DNA helicase RecQ 14 603 4.0E-267 T 15-10-2018 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial GO:0004003|GO:0006310|GO:0009432 AM378_20180 1fe773f7e0f9b8aa5b02596fc844ef6e 610 SUPERFAMILY SSF52540 208 454 1.65E-65 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_20180 1fe773f7e0f9b8aa5b02596fc844ef6e 610 Pfam PF00570 HRDC domain 535 601 1.1E-23 T 15-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 AM378_19395 1a2a258e71894fff1d92a925ba472d9d 437 Pfam PF13434 L-lysine 6-monooxygenase (NADPH-requiring) 4 334 4.6E-114 T 15-10-2018 IPR025700 L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase AM378_19395 1a2a258e71894fff1d92a925ba472d9d 437 SUPERFAMILY SSF51905 1 248 6.48E-24 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AM378_19395 1a2a258e71894fff1d92a925ba472d9d 437 Gene3D G3DSA:3.50.50.60 1 417 5.9E-117 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AM378_19395 1a2a258e71894fff1d92a925ba472d9d 437 SUPERFAMILY SSF51905 177 408 2.81E-7 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AM378_10380 ec4d787b340a540ace0aef6c1f95873d 198 Gene3D G3DSA:2.160.10.10 2 178 2.3E-52 T 15-10-2018 AM378_10380 ec4d787b340a540ace0aef6c1f95873d 198 SUPERFAMILY SSF51161 2 167 1.39E-44 T 15-10-2018 IPR011004 Trimeric LpxA-like superfamily AM378_10380 ec4d787b340a540ace0aef6c1f95873d 198 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 88 122 9.0E-8 T 15-10-2018 IPR001451 Hexapeptide repeat AM378_10380 ec4d787b340a540ace0aef6c1f95873d 198 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 16 45 9.2E-6 T 15-10-2018 IPR001451 Hexapeptide repeat AM378_10380 ec4d787b340a540ace0aef6c1f95873d 198 TIGRFAM TIGR02287 PaaY: phenylacetic acid degradation protein PaaY 3 194 1.4E-102 T 15-10-2018 IPR011974 Phenylacetic acid degradation protein PaaY AM378_16395 44e17e3be9ee13f309e265a9039df723 495 Pfam PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus 108 494 3.8E-152 T 15-10-2018 IPR007392 D-galactarate/Altronate dehydratase, C-terminal GO:0016829 AM378_16395 44e17e3be9ee13f309e265a9039df723 495 Pfam PF08666 SAF domain 11 80 2.5E-15 T 15-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 AM378_16395 44e17e3be9ee13f309e265a9039df723 495 Gene3D G3DSA:3.90.1210.30 3 85 1.3E-29 T 15-10-2018 AM378_16395 44e17e3be9ee13f309e265a9039df723 495 SMART SM00858 11 82 8.2E-17 T 15-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 AM378_02515 17e7407e312736d8337ac3f2f9afa508 217 Gene3D G3DSA:3.40.1050.10 1 202 2.5E-68 T 15-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 AM378_02515 17e7407e312736d8337ac3f2f9afa508 217 ProSitePatterns PS00704 Prokaryotic-type carbonic anhydrases signature 1. 39 46 - T 15-10-2018 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 AM378_02515 17e7407e312736d8337ac3f2f9afa508 217 ProSitePatterns PS00705 Prokaryotic-type carbonic anhydrases signature 2. 82 102 - T 15-10-2018 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 AM378_02515 17e7407e312736d8337ac3f2f9afa508 217 SUPERFAMILY SSF53056 1 203 1.44E-64 T 15-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 AM378_02515 17e7407e312736d8337ac3f2f9afa508 217 Pfam PF00484 Carbonic anhydrase 34 188 1.5E-48 T 15-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 AM378_02515 17e7407e312736d8337ac3f2f9afa508 217 SMART SM00947 27 193 8.7E-67 T 15-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 AM378_14185 818caade6c80860ac61a7fd3822c80e5 66 Hamap MF_01064 UPF0253 protein YaeP [yaeP]. 1 66 26.369 T 15-10-2018 IPR009624 Uncharacterised protein family UPF0253 AM378_14185 818caade6c80860ac61a7fd3822c80e5 66 ProDom PD054643 UPF0253 YAEP CYTOPLASMIC VP2335 YPO1064.1/Y3113/YP2785 VC0872 VV2574 PBPRA2947 VV11836 1 66 1.0E-19 T 15-10-2018 IPR009624 Uncharacterised protein family UPF0253 AM378_14185 818caade6c80860ac61a7fd3822c80e5 66 Pfam PF06786 Uncharacterised protein family (UPF0253) 2 65 3.4E-36 T 15-10-2018 IPR009624 Uncharacterised protein family UPF0253 AM378_01810 aba620bbcffa0655db3a22773aac7e7d 272 Gene3D G3DSA:3.40.190.10 29 268 1.1E-87 T 15-10-2018 AM378_01810 aba620bbcffa0655db3a22773aac7e7d 272 Gene3D G3DSA:3.40.190.10 112 220 1.1E-87 T 15-10-2018 AM378_01810 aba620bbcffa0655db3a22773aac7e7d 272 SUPERFAMILY SSF53850 26 270 6.92E-70 T 15-10-2018 AM378_01810 aba620bbcffa0655db3a22773aac7e7d 272 PIRSF PIRSF002854 1 272 6.3E-89 T 15-10-2018 IPR004872 Lipoprotein NlpA family AM378_01810 aba620bbcffa0655db3a22773aac7e7d 272 Pfam PF03180 NLPA lipoprotein 27 270 5.2E-76 T 15-10-2018 IPR004872 Lipoprotein NlpA family AM378_08265 070ed8de1e847711ce07cf74f5053b34 302 Gene3D G3DSA:1.10.3720.10 100 298 8.7E-17 T 15-10-2018 IPR035906 MetI-like superfamily AM378_08265 070ed8de1e847711ce07cf74f5053b34 302 SUPERFAMILY SSF161098 100 283 7.85E-24 T 15-10-2018 IPR035906 MetI-like superfamily AM378_08265 070ed8de1e847711ce07cf74f5053b34 302 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 24 76 1.9E-13 T 15-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain AM378_08265 070ed8de1e847711ce07cf74f5053b34 302 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 119 300 4.3E-26 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AM378_00660 9588950d97ddd42a0b5b5f3811ff9e25 88 Hamap MF_00659 UPF0250 protein YbeD [ybeD]. 2 88 27.378 T 15-10-2018 IPR007454 Uncharacterised protein family UPF0250 AM378_00660 9588950d97ddd42a0b5b5f3811ff9e25 88 Pfam PF04359 Protein of unknown function (DUF493) 8 88 1.8E-30 T 15-10-2018 IPR007454 Uncharacterised protein family UPF0250 AM378_00660 9588950d97ddd42a0b5b5f3811ff9e25 88 Gene3D G3DSA:3.30.70.260 2 88 2.3E-35 T 15-10-2018 AM378_00660 9588950d97ddd42a0b5b5f3811ff9e25 88 SUPERFAMILY SSF117991 3 88 4.58E-32 T 15-10-2018 IPR027471 YbeD-like domain superfamily AM378_14090 7b9b68960ce4e56d891c237b0654fc31 882 Gene3D G3DSA:3.40.50.261 285 455 3.8E-43 T 15-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AM378_14090 7b9b68960ce4e56d891c237b0654fc31 882 SUPERFAMILY SSF55729 614 861 1.49E-25 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase AM378_14090 7b9b68960ce4e56d891c237b0654fc31 882 SUPERFAMILY SSF56059 481 690 5.5E-28 T 15-10-2018 AM378_14090 7b9b68960ce4e56d891c237b0654fc31 882 SUPERFAMILY SSF51735 2 135 4.6E-31 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily AM378_14090 7b9b68960ce4e56d891c237b0654fc31 882 Gene3D G3DSA:3.40.50.720 4 125 1.3E-30 T 15-10-2018 AM378_14090 7b9b68960ce4e56d891c237b0654fc31 882 Gene3D G3DSA:3.30.470.20 481 690 1.6E-57 T 15-10-2018 AM378_14090 7b9b68960ce4e56d891c237b0654fc31 882 SUPERFAMILY SSF52210 125 286 5.36E-35 T 15-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AM378_14090 7b9b68960ce4e56d891c237b0654fc31 882 Pfam PF13607 Succinyl-CoA ligase like flavodoxin domain 147 280 1.1E-45 T 15-10-2018 IPR032875 Succinyl-CoA synthetase-like, flavodoxin domain AM378_14090 7b9b68960ce4e56d891c237b0654fc31 882 Pfam PF13549 ATP-grasp domain 472 694 2.2E-74 T 15-10-2018 AM378_14090 7b9b68960ce4e56d891c237b0654fc31 882 Pfam PF00583 Acetyltransferase (GNAT) family 761 859 8.6E-12 T 15-10-2018 IPR000182 GNAT domain AM378_14090 7b9b68960ce4e56d891c237b0654fc31 882 Gene3D G3DSA:3.40.630.30 717 882 1.5E-45 T 15-10-2018 AM378_14090 7b9b68960ce4e56d891c237b0654fc31 882 Pfam PF13380 CoA binding domain 13 129 1.6E-20 T 15-10-2018 IPR003781 CoA-binding GO:0048037 AM378_14090 7b9b68960ce4e56d891c237b0654fc31 882 SMART SM00881 9 104 1.2E-24 T 15-10-2018 IPR003781 CoA-binding GO:0048037 AM378_14090 7b9b68960ce4e56d891c237b0654fc31 882 Gene3D G3DSA:3.30.1490.20 499 576 1.6E-57 T 15-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 AM378_14090 7b9b68960ce4e56d891c237b0654fc31 882 SUPERFAMILY SSF52210 287 447 1.96E-38 T 15-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AM378_14090 7b9b68960ce4e56d891c237b0654fc31 882 Gene3D G3DSA:3.40.50.261 126 283 1.9E-47 T 15-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AM378_17215 d8d865ec6d70f1ea3978e58523603ab5 1608 SMART SM00912 48 168 9.4E-42 T 15-10-2018 IPR008638 Filamentous haemagglutinin, N-terminal AM378_17215 d8d865ec6d70f1ea3978e58523603ab5 1608 SUPERFAMILY SSF51126 40 378 5.02E-52 T 15-10-2018 IPR011050 Pectin lyase fold/virulence factor AM378_17215 d8d865ec6d70f1ea3978e58523603ab5 1608 Pfam PF05860 haemagglutination activity domain 32 166 3.6E-30 T 15-10-2018 IPR008638 Filamentous haemagglutinin, N-terminal AM378_17215 d8d865ec6d70f1ea3978e58523603ab5 1608 TIGRFAM TIGR01901 adhes_NPXG: filamentous hemagglutinin family N-terminal domain 66 159 1.0E-16 T 15-10-2018 IPR008638 Filamentous haemagglutinin, N-terminal AM378_17215 d8d865ec6d70f1ea3978e58523603ab5 1608 Gene3D G3DSA:2.160.20.10 31 281 2.0E-76 T 15-10-2018 IPR012334 Pectin lyase fold AM378_17215 d8d865ec6d70f1ea3978e58523603ab5 1608 Pfam PF13332 Haemagluttinin repeat 623 784 4.1E-13 T 15-10-2018 IPR025157 Hemagglutinin repeat AM378_17215 d8d865ec6d70f1ea3978e58523603ab5 1608 Pfam PF13332 Haemagluttinin repeat 805 890 9.2E-5 T 15-10-2018 IPR025157 Hemagglutinin repeat AM378_17215 d8d865ec6d70f1ea3978e58523603ab5 1608 Pfam PF13332 Haemagluttinin repeat 394 455 7.4E-7 T 15-10-2018 IPR025157 Hemagglutinin repeat AM378_17215 d8d865ec6d70f1ea3978e58523603ab5 1608 Pfam PF13332 Haemagluttinin repeat 1108 1204 2.5E-10 T 15-10-2018 IPR025157 Hemagglutinin repeat AM378_17215 d8d865ec6d70f1ea3978e58523603ab5 1608 Pfam PF13332 Haemagluttinin repeat 471 588 0.0013 T 15-10-2018 IPR025157 Hemagglutinin repeat AM378_17215 d8d865ec6d70f1ea3978e58523603ab5 1608 Pfam PF13332 Haemagluttinin repeat 1211 1373 4.5E-25 T 15-10-2018 IPR025157 Hemagglutinin repeat AM378_17215 d8d865ec6d70f1ea3978e58523603ab5 1608 Pfam PF13332 Haemagluttinin repeat 924 1086 7.2E-20 T 15-10-2018 IPR025157 Hemagglutinin repeat AM378_03190 0c16da42d60a16a4aa9cc5d0d952e683 129 ProDom PD079046 MEMBRANE INNER YBJM TRANSMEMBRANE 31 108 9.0E-14 T 15-10-2018 IPR020368 Uncharacterised protein family YbjM GO:0016021 AM378_03190 0c16da42d60a16a4aa9cc5d0d952e683 129 Pfam PF11045 Putative inner membrane protein of Enterobacteriaceae 4 117 4.1E-46 T 15-10-2018 IPR020368 Uncharacterised protein family YbjM GO:0016021 AM378_09795 49bfd606c955edecb0142cbf7e3a2cce 538 SMART SM00283 265 512 5.1E-101 T 15-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AM378_09795 49bfd606c955edecb0142cbf7e3a2cce 538 SUPERFAMILY SSF58104 232 513 7.85E-74 T 15-10-2018 AM378_09795 49bfd606c955edecb0142cbf7e3a2cce 538 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 363 390 9.5E-84 T 15-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AM378_09795 49bfd606c955edecb0142cbf7e3a2cce 538 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 60 75 9.5E-84 T 15-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AM378_09795 49bfd606c955edecb0142cbf7e3a2cce 538 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 188 208 9.5E-84 T 15-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AM378_09795 49bfd606c955edecb0142cbf7e3a2cce 538 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 5 30 9.5E-84 T 15-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AM378_09795 49bfd606c955edecb0142cbf7e3a2cce 538 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 392 421 9.5E-84 T 15-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AM378_09795 49bfd606c955edecb0142cbf7e3a2cce 538 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 440 469 9.5E-84 T 15-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AM378_09795 49bfd606c955edecb0142cbf7e3a2cce 538 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 286 315 9.5E-84 T 15-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AM378_09795 49bfd606c955edecb0142cbf7e3a2cce 538 Pfam PF02203 Tar ligand binding domain homologue 2 175 5.8E-52 T 15-10-2018 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding GO:0006935|GO:0007165 AM378_09795 49bfd606c955edecb0142cbf7e3a2cce 538 SMART SM00319 44 178 1.5E-29 T 15-10-2018 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding GO:0006935|GO:0007165 AM378_09795 49bfd606c955edecb0142cbf7e3a2cce 538 Gene3D G3DSA:1.10.287.950 212 514 1.6E-91 T 15-10-2018 AM378_09795 49bfd606c955edecb0142cbf7e3a2cce 538 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 323 480 5.3E-55 T 15-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AM378_09795 49bfd606c955edecb0142cbf7e3a2cce 538 Pfam PF00672 HAMP domain 214 259 1.0E-9 T 15-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AM378_09795 49bfd606c955edecb0142cbf7e3a2cce 538 Gene3D G3DSA:1.20.120.30 22 188 2.1E-40 T 15-10-2018 AM378_09795 49bfd606c955edecb0142cbf7e3a2cce 538 SMART SM00304 212 264 1.3E-10 T 15-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AM378_09795 49bfd606c955edecb0142cbf7e3a2cce 538 SUPERFAMILY SSF47170 39 173 1.83E-39 T 15-10-2018 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily AM378_09795 49bfd606c955edecb0142cbf7e3a2cce 538 ProSitePatterns PS00538 Bacterial chemotaxis sensory transducers signature. 290 312 - T 15-10-2018 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site AM378_24140 a62a373dd4c762c3096e918bc7b20cd3 410 Pfam PF00149 Calcineurin-like phosphoesterase 1 93 8.3E-13 T 15-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 AM378_24140 a62a373dd4c762c3096e918bc7b20cd3 410 Pfam PF12320 Type 5 capsule protein repressor C-terminal domain 282 379 5.3E-24 T 15-10-2018 IPR026843 Nuclease SbcCD subunit D, C-terminal domain AM378_24140 a62a373dd4c762c3096e918bc7b20cd3 410 TIGRFAM TIGR00619 sbcd: exonuclease SbcCD, D subunit 1 259 7.9E-78 T 15-10-2018 IPR004593 Nuclease SbcCD subunit D GO:0004519|GO:0006259|GO:0008408 AM378_24140 a62a373dd4c762c3096e918bc7b20cd3 410 Gene3D G3DSA:3.30.160.720 283 346 7.5E-28 T 15-10-2018 AM378_24140 a62a373dd4c762c3096e918bc7b20cd3 410 Gene3D G3DSA:3.60.21.10 1 281 6.1E-92 T 15-10-2018 IPR029052 Metallo-dependent phosphatase-like AM378_24140 a62a373dd4c762c3096e918bc7b20cd3 410 SUPERFAMILY SSF56300 1 339 5.86E-58 T 15-10-2018 AM378_03015 e87526e4620c754822f2181a809266aa 173 SUPERFAMILY SSF49401 29 173 4.77E-41 T 15-10-2018 IPR008966 Adhesion domain superfamily AM378_03015 e87526e4620c754822f2181a809266aa 173 Pfam PF00419 Fimbrial protein 31 173 2.7E-17 T 15-10-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM378_03015 e87526e4620c754822f2181a809266aa 173 Gene3D G3DSA:2.60.40.1090 41 173 1.7E-39 T 15-10-2018 IPR036937 Fimbrial-type adhesion domain superfamily GO:0007155|GO:0009289 AM378_23375 9d136f2e11bda0fc42f4790935713aaa 243 Hamap MF_00922 Outer membrane protein assembly factor BamD [bamD]. 4 242 38.177 T 15-10-2018 IPR017689 Outer membrane protein assembly factor BamD AM378_23375 9d136f2e11bda0fc42f4790935713aaa 243 Pfam PF13525 Outer membrane lipoprotein 28 236 7.6E-83 T 15-10-2018 IPR039565 Outer membrane lipoprotein BamD-like AM378_23375 9d136f2e11bda0fc42f4790935713aaa 243 SUPERFAMILY SSF48452 26 119 6.64E-8 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AM378_23375 9d136f2e11bda0fc42f4790935713aaa 243 Gene3D G3DSA:1.25.40.10 29 243 6.6E-61 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AM378_23375 9d136f2e11bda0fc42f4790935713aaa 243 TIGRFAM TIGR03302 OM_YfiO: outer membrane assembly lipoprotein YfiO 5 241 2.0E-86 T 15-10-2018 IPR017689 Outer membrane protein assembly factor BamD AM378_13225 9ab420584251cd7db8351698f8f34667 1015 SMART SM00869 745 1005 1.7E-59 T 15-10-2018 IPR005546 Autotransporter beta-domain AM378_13225 9ab420584251cd7db8351698f8f34667 1015 SUPERFAMILY SSF103515 693 1015 3.53E-72 T 15-10-2018 IPR036709 Autotransporter beta-domain superfamily AM378_13225 9ab420584251cd7db8351698f8f34667 1015 TIGRFAM TIGR04393 rpt_T5SS_PEPC: T5SS/PEP-CTERM-associated repeat 250 290 1.0E-6 T 15-10-2018 IPR030895 T5SS/PEP-CTERM-associated repeat AM378_13225 9ab420584251cd7db8351698f8f34667 1015 Pfam PF03797 Autotransporter beta-domain 748 995 2.3E-65 T 15-10-2018 IPR005546 Autotransporter beta-domain AM378_13225 9ab420584251cd7db8351698f8f34667 1015 Gene3D G3DSA:2.40.128.130 685 1015 2.7E-78 T 15-10-2018 IPR036709 Autotransporter beta-domain superfamily AM378_13225 9ab420584251cd7db8351698f8f34667 1015 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 481 1015 4.4E-54 T 15-10-2018 IPR006315 Outer membrane autotransporter barrel GO:0019867 AM378_22825 13cc51fe7f5f00b795d2d37b2792b787 360 TIGRFAM TIGR00445 mraY: phospho-N-acetylmuramoyl-pentapeptide-transferase 37 360 1.4E-161 T 15-10-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AM378_22825 13cc51fe7f5f00b795d2d37b2792b787 360 Pfam PF00953 Glycosyl transferase family 4 99 284 5.6E-37 T 15-10-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 AM378_22825 13cc51fe7f5f00b795d2d37b2792b787 360 Pfam PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 68 80 9.3E-6 T 15-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AM378_22825 13cc51fe7f5f00b795d2d37b2792b787 360 ProSitePatterns PS01347 MraY family signature 1. 68 80 - T 15-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AM378_22825 13cc51fe7f5f00b795d2d37b2792b787 360 Hamap MF_00038 Phospho-N-acetylmuramoyl-pentapeptide-transferase [mraY]. 25 358 25.989 T 15-10-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AM378_22825 13cc51fe7f5f00b795d2d37b2792b787 360 ProSitePatterns PS01348 MraY family signature 2. 189 200 - T 15-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AM378_23525 a2f7ab0334b98aae3b6b54bdbccd4723 399 PIRSF PIRSF031134 1 399 6.6E-162 T 15-10-2018 IPR009212 Methylthioribose kinase GO:0009086|GO:0046522 KEGG: 00270+2.7.1.100|MetaCyc: PWY-6754 AM378_23525 a2f7ab0334b98aae3b6b54bdbccd4723 399 TIGRFAM TIGR01767 MTRK: S-methyl-5-thioribose kinase 33 396 1.7E-157 T 15-10-2018 IPR009212 Methylthioribose kinase GO:0009086|GO:0046522 KEGG: 00270+2.7.1.100|MetaCyc: PWY-6754 AM378_23525 a2f7ab0334b98aae3b6b54bdbccd4723 399 SUPERFAMILY SSF56112 2 397 9.62E-90 T 15-10-2018 IPR011009 Protein kinase-like domain superfamily AM378_23525 a2f7ab0334b98aae3b6b54bdbccd4723 399 Gene3D G3DSA:3.30.200.20 1 115 3.7E-39 T 15-10-2018 AM378_23525 a2f7ab0334b98aae3b6b54bdbccd4723 399 Pfam PF01636 Phosphotransferase enzyme family 33 263 1.7E-11 T 15-10-2018 IPR002575 Aminoglycoside phosphotransferase AM378_23525 a2f7ab0334b98aae3b6b54bdbccd4723 399 Gene3D G3DSA:3.90.1200.10 116 398 7.3E-99 T 15-10-2018 AM378_23525 a2f7ab0334b98aae3b6b54bdbccd4723 399 Hamap MF_01683 Methylthioribose kinase [mtnK]. 1 399 209.534 T 15-10-2018 IPR009212 Methylthioribose kinase GO:0009086|GO:0046522 KEGG: 00270+2.7.1.100|MetaCyc: PWY-6754 AM378_13945 61652c9827aa595674ab62bad8145901 477 SMART SM00345 23 82 8.8E-17 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM378_13945 61652c9827aa595674ab62bad8145901 477 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 56 72 1.5E-6 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM378_13945 61652c9827aa595674ab62bad8145901 477 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 42 56 1.5E-6 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM378_13945 61652c9827aa595674ab62bad8145901 477 SUPERFAMILY SSF53383 78 475 3.73E-88 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM378_13945 61652c9827aa595674ab62bad8145901 477 Pfam PF00392 Bacterial regulatory proteins, gntR family 19 82 4.7E-18 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM378_13945 61652c9827aa595674ab62bad8145901 477 SUPERFAMILY SSF46785 17 85 2.72E-19 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM378_13945 61652c9827aa595674ab62bad8145901 477 Pfam PF00155 Aminotransferase class I and II 150 416 3.6E-21 T 15-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AM378_13945 61652c9827aa595674ab62bad8145901 477 Gene3D G3DSA:3.40.640.10 107 467 2.7E-112 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AM378_13945 61652c9827aa595674ab62bad8145901 477 Gene3D G3DSA:1.10.10.10 7 83 1.0E-22 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_00850 eac56f752480d04525f7c71f23e1d78d 678 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 530 654 3.1E-48 T 15-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 AM378_00850 eac56f752480d04525f7c71f23e1d78d 678 Pfam PF02378 Phosphotransferase system, EIIC 12 324 1.8E-78 T 15-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 AM378_00850 eac56f752480d04525f7c71f23e1d78d 678 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 435 452 - T 15-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 AM378_00850 eac56f752480d04525f7c71f23e1d78d 678 Gene3D G3DSA:2.70.70.10 520 678 2.5E-54 T 15-10-2018 IPR011055 Duplicated hybrid motif AM378_00850 eac56f752480d04525f7c71f23e1d78d 678 ProSitePatterns PS00371 PTS EIIA domains phosphorylation site signature 1. 593 605 - T 15-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 AM378_00850 eac56f752480d04525f7c71f23e1d78d 678 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 383 482 1.1E-19 T 15-10-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 AM378_00850 eac56f752480d04525f7c71f23e1d78d 678 SUPERFAMILY SSF51261 527 675 3.49E-52 T 15-10-2018 IPR011055 Duplicated hybrid motif AM378_00850 eac56f752480d04525f7c71f23e1d78d 678 TIGRFAM TIGR01998 PTS-II-BC-nag: PTS system, N-acetylglucosamine-specific IIBC component 3 493 8.3E-204 T 15-10-2018 IPR010974 Phosphotransferase system, N-acetylglucosamine-specific IIBC component GO:0008982|GO:0009401|GO:0015572|GO:0016021|GO:0019866 AM378_00850 eac56f752480d04525f7c71f23e1d78d 678 Pfam PF00367 phosphotransferase system, EIIB 426 457 1.5E-11 T 15-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 AM378_00850 eac56f752480d04525f7c71f23e1d78d 678 TIGRFAM TIGR00830 PTBA: PTS system, glucose subfamily, IIA component 531 651 8.1E-49 T 15-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 AM378_00850 eac56f752480d04525f7c71f23e1d78d 678 SUPERFAMILY SSF55604 422 495 9.15E-18 T 15-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 AM378_00850 eac56f752480d04525f7c71f23e1d78d 678 Gene3D G3DSA:3.30.1360.60 417 498 8.5E-23 T 15-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 AM378_21710 83769139b07d87e64727d4fc7fb7aa5c 249 SMART SM01133 19 231 4.0E-59 T 15-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 AM378_21710 83769139b07d87e64727d4fc7fb7aa5c 249 Hamap MF_00114 Deoxyribose-phosphate aldolase [deoC]. 18 235 25.288 T 15-10-2018 IPR028581 Deoxyribose-phosphate aldolase type I GO:0004139 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180 AM378_21710 83769139b07d87e64727d4fc7fb7aa5c 249 TIGRFAM TIGR00126 deoC: deoxyribose-phosphate aldolase 20 228 7.0E-55 T 15-10-2018 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|Reactome: R-HSA-6798695|Reactome: R-HSA-71336 AM378_21710 83769139b07d87e64727d4fc7fb7aa5c 249 Gene3D G3DSA:3.20.20.70 1 239 1.0E-68 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM378_21710 83769139b07d87e64727d4fc7fb7aa5c 249 Pfam PF01791 DeoC/LacD family aldolase 91 207 1.2E-7 T 15-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 AM378_21710 83769139b07d87e64727d4fc7fb7aa5c 249 SUPERFAMILY SSF51569 13 228 1.67E-59 T 15-10-2018 AM378_21710 83769139b07d87e64727d4fc7fb7aa5c 249 PIRSF PIRSF001357 13 240 7.4E-64 T 15-10-2018 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|Reactome: R-HSA-6798695|Reactome: R-HSA-71336 AM378_21390 8919a757ed8db76161165a46df562a69 640 SMART SM00487 26 224 1.8E-64 T 15-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AM378_21390 8919a757ed8db76161165a46df562a69 640 SMART SM00490 260 341 1.4E-31 T 15-10-2018 IPR001650 Helicase, C-terminal AM378_21390 8919a757ed8db76161165a46df562a69 640 Hamap MF_00964 ATP-dependent RNA helicase DeaD [deaD]. 2 558 47.0 T 15-10-2018 IPR028618 ATP-dependent RNA helicase DeaD GO:0000027|GO:0004004|GO:0070417 AM378_21390 8919a757ed8db76161165a46df562a69 640 Pfam PF03880 DbpA RNA binding domain 487 556 5.9E-20 T 15-10-2018 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain AM378_21390 8919a757ed8db76161165a46df562a69 640 Gene3D G3DSA:3.30.70.330 484 557 1.0E-9 T 15-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily AM378_21390 8919a757ed8db76161165a46df562a69 640 Pfam PF00271 Helicase conserved C-terminal domain 233 341 1.3E-28 T 15-10-2018 IPR001650 Helicase, C-terminal AM378_21390 8919a757ed8db76161165a46df562a69 640 Gene3D G3DSA:3.40.50.300 2 212 6.7E-77 T 15-10-2018 AM378_21390 8919a757ed8db76161165a46df562a69 640 Gene3D G3DSA:3.40.50.300 213 433 1.6E-49 T 15-10-2018 AM378_21390 8919a757ed8db76161165a46df562a69 640 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 155 163 - T 15-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site AM378_21390 8919a757ed8db76161165a46df562a69 640 Pfam PF12343 Cold shock protein DEAD box A 575 640 3.5E-16 T 15-10-2018 IPR021046 Cold-shock protein, DEAD box A, C-terminal GO:0016817 AM378_21390 8919a757ed8db76161165a46df562a69 640 Pfam PF00270 DEAD/DEAH box helicase 32 196 1.4E-51 T 15-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AM378_21390 8919a757ed8db76161165a46df562a69 640 SUPERFAMILY SSF52540 76 362 9.66E-73 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_06845 b6487722dc00eccaa8cea15da362bcd5 251 Pfam PF03070 TENA/THI-4/PQQC family 15 223 8.1E-63 T 15-10-2018 IPR004305 Thiaminase-2/PQQC AM378_06845 b6487722dc00eccaa8cea15da362bcd5 251 Hamap MF_00654 Pyrroloquinoline-quinone synthase [pqqC]. 1 251 138.6 T 15-10-2018 IPR011845 Coenzyme PQQ biosynthesis protein C GO:0018189|GO:0055114 MetaCyc: PWY-6420 AM378_06845 b6487722dc00eccaa8cea15da362bcd5 251 Gene3D G3DSA:1.20.910.10 5 251 3.0E-83 T 15-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 AM378_06845 b6487722dc00eccaa8cea15da362bcd5 251 SUPERFAMILY SSF48613 5 249 1.58E-77 T 15-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 AM378_06845 b6487722dc00eccaa8cea15da362bcd5 251 TIGRFAM TIGR02111 PQQ_syn_pqqC: coenzyme PQQ biosynthesis protein C 8 240 3.5E-117 T 15-10-2018 IPR011845 Coenzyme PQQ biosynthesis protein C GO:0018189|GO:0055114 MetaCyc: PWY-6420 AM378_00325 8e34ca47fa2d6211ac6d339ce0f5d2b6 255 SUPERFAMILY SSF46689 205 253 2.29E-7 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AM378_00325 8e34ca47fa2d6211ac6d339ce0f5d2b6 255 Gene3D G3DSA:2.60.120.10 18 84 7.8E-8 T 15-10-2018 IPR014710 RmlC-like jelly roll fold AM378_00325 8e34ca47fa2d6211ac6d339ce0f5d2b6 255 Pfam PF12833 Helix-turn-helix domain 175 253 6.3E-19 T 15-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM378_00325 8e34ca47fa2d6211ac6d339ce0f5d2b6 255 SUPERFAMILY SSF51182 29 183 4.98E-16 T 15-10-2018 IPR011051 RmlC-like cupin domain superfamily AM378_00325 8e34ca47fa2d6211ac6d339ce0f5d2b6 255 Gene3D G3DSA:1.10.10.60 160 255 2.6E-19 T 15-10-2018 AM378_00325 8e34ca47fa2d6211ac6d339ce0f5d2b6 255 Pfam PF02311 AraC-like ligand binding domain 18 117 2.0E-11 T 15-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 AM378_00325 8e34ca47fa2d6211ac6d339ce0f5d2b6 255 SMART SM00342 169 251 7.5E-16 T 15-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM378_18790 7c38891bac2af95f1b2eb481a540511f 329 Gene3D G3DSA:3.40.190.10 27 295 2.9E-139 T 15-10-2018 AM378_18790 7c38891bac2af95f1b2eb481a540511f 329 Gene3D G3DSA:3.40.190.10 114 325 2.9E-139 T 15-10-2018 AM378_18790 7c38891bac2af95f1b2eb481a540511f 329 TIGRFAM TIGR00971 3a0106s03: sulfate ABC transporter, sulfate-binding protein 13 326 2.8E-177 T 15-10-2018 IPR005669 Thiosulphate/Sulfate-binding protein GO:0008272|GO:0015419 AM378_18790 7c38891bac2af95f1b2eb481a540511f 329 SUPERFAMILY SSF53850 21 326 1.57E-91 T 15-10-2018 AM378_18790 7c38891bac2af95f1b2eb481a540511f 329 Pfam PF13531 Bacterial extracellular solute-binding protein 42 280 1.4E-45 T 15-10-2018 AM378_18790 7c38891bac2af95f1b2eb481a540511f 329 ProSitePatterns PS00757 Prokaryotic sulfate-binding proteins signature 2. 145 153 - T 15-10-2018 IPR034408 Sulphate/thiosulphate-binding site GO:1901681 AM378_08725 59b834921ce7e34cd6139849f9a24137 247 Gene3D G3DSA:3.40.50.150 18 247 1.7E-68 T 15-10-2018 AM378_08725 59b834921ce7e34cd6139849f9a24137 247 SUPERFAMILY SSF53335 20 242 2.48E-43 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM378_08725 59b834921ce7e34cd6139849f9a24137 247 Hamap MF_01589 Carboxy-S-adenosyl-L-methionine synthase [cmoA]. 3 242 42.974 T 15-10-2018 IPR005271 Carboxy-S-adenosyl-L-methionine synthase GO:0002098 AM378_08725 59b834921ce7e34cd6139849f9a24137 247 TIGRFAM TIGR00740 TIGR00740: tRNA (cmo5U34)-methyltransferase 4 242 9.7E-129 T 15-10-2018 IPR005271 Carboxy-S-adenosyl-L-methionine synthase GO:0002098 AM378_08725 59b834921ce7e34cd6139849f9a24137 247 Pfam PF13649 Methyltransferase domain 60 158 9.1E-15 T 15-10-2018 AM378_08725 59b834921ce7e34cd6139849f9a24137 247 PIRSF PIRSF006325 1 243 3.3E-131 T 15-10-2018 IPR005271 Carboxy-S-adenosyl-L-methionine synthase GO:0002098 AM378_07440 fc3893d5e7d92a7ebe4d57197fd36f44 342 Gene3D G3DSA:3.30.460.20 11 151 3.8E-25 T 15-10-2018 AM378_07440 fc3893d5e7d92a7ebe4d57197fd36f44 342 Gene3D G3DSA:1.20.58.340 284 340 2.5E-12 T 15-10-2018 AM378_07440 fc3893d5e7d92a7ebe4d57197fd36f44 342 Pfam PF01544 CorA-like Mg2+ transporter protein 52 333 3.0E-51 T 15-10-2018 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 AM378_07440 fc3893d5e7d92a7ebe4d57197fd36f44 342 SUPERFAMILY SSF144083 277 338 3.4E-14 T 15-10-2018 AM378_07440 fc3893d5e7d92a7ebe4d57197fd36f44 342 SUPERFAMILY SSF143865 44 269 1.57E-40 T 15-10-2018 AM378_07440 fc3893d5e7d92a7ebe4d57197fd36f44 342 Gene3D G3DSA:1.20.58.340 154 276 4.3E-18 T 15-10-2018 AM378_03115 3327290e65ea4ab7b4464b6e4466248b 333 TIGRFAM TIGR00557 pdxA: 4-hydroxythreonine-4-phosphate dehydrogenase PdxA 7 329 4.4E-112 T 15-10-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00750+1.1.1.262 AM378_03115 3327290e65ea4ab7b4464b6e4466248b 333 SUPERFAMILY SSF53659 6 331 8.8E-107 T 15-10-2018 AM378_03115 3327290e65ea4ab7b4464b6e4466248b 333 Pfam PF04166 Pyridoxal phosphate biosynthetic protein PdxA 35 326 2.2E-102 T 15-10-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00750+1.1.1.262 AM378_03115 3327290e65ea4ab7b4464b6e4466248b 333 Gene3D G3DSA:3.40.718.10 1 333 2.6E-126 T 15-10-2018 AM378_11830 216ae607da766a3994159550ac62018e 164 Gene3D G3DSA:1.10.287.680 1 53 4.0E-33 T 15-10-2018 IPR023145 YfbU, helix-hairpin domain superfamily AM378_11830 216ae607da766a3994159550ac62018e 164 Hamap MF_00762 UPF0304 protein YfbU [yfbU]. 1 164 37.24 T 15-10-2018 IPR005587 Uncharacterised protein family UPF0304, YfbU AM378_11830 216ae607da766a3994159550ac62018e 164 SUPERFAMILY SSF116960 1 164 1.57E-65 T 15-10-2018 AM378_11830 216ae607da766a3994159550ac62018e 164 Pfam PF03887 YfbU domain 1 164 1.0E-66 T 15-10-2018 IPR005587 Uncharacterised protein family UPF0304, YfbU AM378_11830 216ae607da766a3994159550ac62018e 164 PIRSF PIRSF006272 1 164 2.2E-73 T 15-10-2018 IPR005587 Uncharacterised protein family UPF0304, YfbU AM378_11830 216ae607da766a3994159550ac62018e 164 ProDom PD035118 UPF0304 YFBU PLASMID YPO2563/Y1624/YP2374 YBFU PM1500 OXYGEN ECA3037 VV12093 PROTEIN 1 164 5.0E-86 T 15-10-2018 IPR005587 Uncharacterised protein family UPF0304, YfbU AM378_11830 216ae607da766a3994159550ac62018e 164 Gene3D G3DSA:1.10.3190.10 54 164 7.0E-37 T 15-10-2018 IPR023146 YfbU, alpha-helical bundle domain superfamily AM378_20420 b5441917c8b7474620334aff0e8488c3 253 SUPERFAMILY SSF53167 6 250 8.51E-73 T 15-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 AM378_20420 b5441917c8b7474620334aff0e8488c3 253 ProSitePatterns PS01232 Purine and other phosphorylases family 1 signature. 66 81 - T 15-10-2018 IPR018016 Nucleoside phosphorylase, conserved site GO:0016763 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-73614|Reactome: R-HSA-73621 AM378_20420 b5441917c8b7474620334aff0e8488c3 253 Pfam PF01048 Phosphorylase superfamily 21 244 2.6E-39 T 15-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 AM378_20420 b5441917c8b7474620334aff0e8488c3 253 Gene3D G3DSA:3.40.50.1580 1 253 1.7E-79 T 15-10-2018 AM378_20420 b5441917c8b7474620334aff0e8488c3 253 TIGRFAM TIGR01718 Uridine-psphlse: uridine phosphorylase 6 253 2.3E-124 T 15-10-2018 IPR010058 Uridine phosphorylase GO:0004850|GO:0005737|GO:0009166 KEGG: 00240+2.4.2.3|KEGG: 00983+2.4.2.3|MetaCyc: PWY-5532 AM378_05800 81d691180b0c63c9c3004aebd9037d9c 192 Gene3D G3DSA:1.10.287.990 20 82 2.6E-26 T 15-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 AM378_05800 81d691180b0c63c9c3004aebd9037d9c 192 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 157 164 - T 15-10-2018 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 AM378_05800 81d691180b0c63c9c3004aebd9037d9c 192 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 2 82 2.2E-34 T 15-10-2018 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 AM378_05800 81d691180b0c63c9c3004aebd9037d9c 192 SUPERFAMILY SSF46609 1 84 2.36E-35 T 15-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 AM378_05800 81d691180b0c63c9c3004aebd9037d9c 192 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 89 189 8.8E-40 T 15-10-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 AM378_05800 81d691180b0c63c9c3004aebd9037d9c 192 Gene3D G3DSA:2.40.500.20 83 192 1.8E-43 T 15-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 AM378_05800 81d691180b0c63c9c3004aebd9037d9c 192 PRINTS PR01703 Manganese superoxide dismutase signature 27 40 4.9E-22 T 15-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 AM378_05800 81d691180b0c63c9c3004aebd9037d9c 192 PRINTS PR01703 Manganese superoxide dismutase signature 65 78 4.9E-22 T 15-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 AM378_05800 81d691180b0c63c9c3004aebd9037d9c 192 PRINTS PR01703 Manganese superoxide dismutase signature 118 126 4.9E-22 T 15-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 AM378_05800 81d691180b0c63c9c3004aebd9037d9c 192 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 4.9E-22 T 15-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 AM378_05800 81d691180b0c63c9c3004aebd9037d9c 192 PRINTS PR01703 Manganese superoxide dismutase signature 155 167 4.9E-22 T 15-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 AM378_05800 81d691180b0c63c9c3004aebd9037d9c 192 PIRSF PIRSF000349 1 192 2.3E-85 T 15-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 AM378_05800 81d691180b0c63c9c3004aebd9037d9c 192 SUPERFAMILY SSF54719 82 191 1.57E-43 T 15-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 AM378_19425 124fb12b62dfe0c9b08701fd15866a3d 464 ProSitePatterns PS01008 DnaA protein signature. 422 441 - T 15-10-2018 IPR018312 Chromosomal replication control, initiator DnaA, conserved site GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 AM378_19425 124fb12b62dfe0c9b08701fd15866a3d 464 Pfam PF11638 DnaA N-terminal domain 4 64 2.7E-20 T 15-10-2018 IPR024633 DnaA N-terminal domain AM378_19425 124fb12b62dfe0c9b08701fd15866a3d 464 SMART SM00760 372 441 6.1E-45 T 15-10-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 AM378_19425 124fb12b62dfe0c9b08701fd15866a3d 464 TIGRFAM TIGR00362 DnaA: chromosomal replication initiator protein DnaA 6 462 1.9E-186 T 15-10-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 AM378_19425 124fb12b62dfe0c9b08701fd15866a3d 464 SUPERFAMILY SSF52540 129 340 7.92E-45 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_19425 124fb12b62dfe0c9b08701fd15866a3d 464 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 260 287 1.2E-54 T 15-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like AM378_19425 124fb12b62dfe0c9b08701fd15866a3d 464 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 226 240 1.2E-54 T 15-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like AM378_19425 124fb12b62dfe0c9b08701fd15866a3d 464 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 162 182 1.2E-54 T 15-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like AM378_19425 124fb12b62dfe0c9b08701fd15866a3d 464 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 194 208 1.2E-54 T 15-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like AM378_19425 124fb12b62dfe0c9b08701fd15866a3d 464 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 422 441 1.2E-54 T 15-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like AM378_19425 124fb12b62dfe0c9b08701fd15866a3d 464 Gene3D G3DSA:1.10.1750.10 371 464 7.3E-40 T 15-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 AM378_19425 124fb12b62dfe0c9b08701fd15866a3d 464 Pfam PF00308 Bacterial dnaA protein 130 346 5.8E-99 T 15-10-2018 IPR013317 Chromosomal replication initiator protein DnaA AM378_19425 124fb12b62dfe0c9b08701fd15866a3d 464 Hamap MF_00377 Chromosomal replication initiator protein DnaA [dnaA]. 3 463 34.437 T 15-10-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 AM378_19425 124fb12b62dfe0c9b08701fd15866a3d 464 Gene3D G3DSA:3.40.50.300 114 293 1.5E-51 T 15-10-2018 AM378_19425 124fb12b62dfe0c9b08701fd15866a3d 464 SUPERFAMILY SSF48295 360 463 3.4E-38 T 15-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 AM378_19425 124fb12b62dfe0c9b08701fd15866a3d 464 SMART SM00382 161 363 6.3E-7 T 15-10-2018 IPR003593 AAA+ ATPase domain AM378_19425 124fb12b62dfe0c9b08701fd15866a3d 464 Gene3D G3DSA:1.10.8.60 295 365 1.1E-23 T 15-10-2018 AM378_19425 124fb12b62dfe0c9b08701fd15866a3d 464 Pfam PF08299 Bacterial dnaA protein helix-turn-helix 373 441 1.0E-32 T 15-10-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 AM378_19425 124fb12b62dfe0c9b08701fd15866a3d 464 Gene3D G3DSA:3.30.300.180 2 108 1.1E-40 T 15-10-2018 IPR038454 DnaA, N-terminal domain superfamily AM378_02615 e0375e14d1f41d4721633d1c2647d48d 345 SUPERFAMILY SSF47413 6 64 2.2E-19 T 15-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AM378_02615 e0375e14d1f41d4721633d1c2647d48d 345 Gene3D G3DSA:3.40.50.2300 165 294 1.1E-67 T 15-10-2018 AM378_02615 e0375e14d1f41d4721633d1c2647d48d 345 SUPERFAMILY SSF53822 66 337 4.12E-79 T 15-10-2018 IPR028082 Periplasmic binding protein-like I AM378_02615 e0375e14d1f41d4721633d1c2647d48d 345 SMART SM00354 6 76 9.9E-34 T 15-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM378_02615 e0375e14d1f41d4721633d1c2647d48d 345 Gene3D G3DSA:3.40.50.2300 61 310 1.1E-67 T 15-10-2018 AM378_02615 e0375e14d1f41d4721633d1c2647d48d 345 Pfam PF00356 Bacterial regulatory proteins, lacI family 8 53 3.0E-20 T 15-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM378_02615 e0375e14d1f41d4721633d1c2647d48d 345 Pfam PF13377 Periplasmic binding protein-like domain 175 334 1.2E-34 T 15-10-2018 AM378_02615 e0375e14d1f41d4721633d1c2647d48d 345 ProSitePatterns PS00356 LacI-type HTH domain signature. 9 27 - T 15-10-2018 AM378_02615 e0375e14d1f41d4721633d1c2647d48d 345 Gene3D G3DSA:1.10.260.40 4 60 1.6E-25 T 15-10-2018 AM378_02615 e0375e14d1f41d4721633d1c2647d48d 345 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 8 18 8.6E-7 T 15-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM378_02615 e0375e14d1f41d4721633d1c2647d48d 345 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 18 28 8.6E-7 T 15-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM378_14350 28d817bda9f2c45007306350ed2c724f 256 Gene3D G3DSA:3.30.2350.10 2 235 1.0E-63 T 15-10-2018 AM378_14350 28d817bda9f2c45007306350ed2c724f 256 Pfam PF00849 RNA pseudouridylate synthase 10 170 2.9E-34 T 15-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM378_14350 28d817bda9f2c45007306350ed2c724f 256 SUPERFAMILY SSF55120 3 236 3.68E-65 T 15-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM378_14350 28d817bda9f2c45007306350ed2c724f 256 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 50 64 - T 15-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM378_07410 53d2b5fbce8d22171535b219ba3e1ba6 237 PIRSF PIRSF039137 1 237 9.3E-103 T 15-10-2018 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein GO:0015658|GO:0015803 AM378_07410 53d2b5fbce8d22171535b219ba3e1ba6 237 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM378_07410 53d2b5fbce8d22171535b219ba3e1ba6 237 SUPERFAMILY SSF52540 5 234 1.97E-57 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_07410 53d2b5fbce8d22171535b219ba3e1ba6 237 Pfam PF00005 ABC transporter 22 165 4.1E-27 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM378_07410 53d2b5fbce8d22171535b219ba3e1ba6 237 Gene3D G3DSA:3.40.50.300 1 237 5.1E-63 T 15-10-2018 AM378_07410 53d2b5fbce8d22171535b219ba3e1ba6 237 SMART SM00382 30 231 2.1E-5 T 15-10-2018 IPR003593 AAA+ ATPase domain AM378_02880 612f718358afbd43dee4af222ae4b67b 468 Pfam PF00393 6-phosphogluconate dehydrogenase, C-terminal domain 178 466 1.6E-133 T 15-10-2018 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 AM378_02880 612f718358afbd43dee4af222ae4b67b 468 SMART SM01350 178 467 6.5E-224 T 15-10-2018 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 AM378_02880 612f718358afbd43dee4af222ae4b67b 468 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 167 195 1.5E-89 T 15-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 AM378_02880 612f718358afbd43dee4af222ae4b67b 468 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 66 95 1.5E-89 T 15-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 AM378_02880 612f718358afbd43dee4af222ae4b67b 468 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 4 27 1.5E-89 T 15-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 AM378_02880 612f718358afbd43dee4af222ae4b67b 468 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 248 275 1.5E-89 T 15-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 AM378_02880 612f718358afbd43dee4af222ae4b67b 468 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 119 144 1.5E-89 T 15-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 AM378_02880 612f718358afbd43dee4af222ae4b67b 468 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 356 378 1.5E-89 T 15-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 AM378_02880 612f718358afbd43dee4af222ae4b67b 468 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 5 173 1.3E-51 T 15-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 AM378_02880 612f718358afbd43dee4af222ae4b67b 468 Gene3D G3DSA:1.20.5.320 435 468 2.0E-22 T 15-10-2018 AM378_02880 612f718358afbd43dee4af222ae4b67b 468 TIGRFAM TIGR00873 gnd: 6-phosphogluconate dehydrogenase (decarboxylating) 5 468 6.2E-230 T 15-10-2018 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 AM378_02880 612f718358afbd43dee4af222ae4b67b 468 Gene3D G3DSA:1.10.1040.10 180 434 2.4E-110 T 15-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AM378_02880 612f718358afbd43dee4af222ae4b67b 468 ProSitePatterns PS00461 6-phosphogluconate dehydrogenase signature. 252 264 - T 15-10-2018 IPR006184 6-phosphogluconate-binding site GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 AM378_02880 612f718358afbd43dee4af222ae4b67b 468 SUPERFAMILY SSF51735 4 175 9.25E-52 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily AM378_02880 612f718358afbd43dee4af222ae4b67b 468 Gene3D G3DSA:3.40.50.720 1 179 3.0E-56 T 15-10-2018 AM378_02880 612f718358afbd43dee4af222ae4b67b 468 PIRSF PIRSF000109 1 468 3.4E-241 T 15-10-2018 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 AM378_02880 612f718358afbd43dee4af222ae4b67b 468 SUPERFAMILY SSF48179 176 467 1.57E-131 T 15-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 AM378_13600 5b6effa31dbe8fde506ee35befaf4a39 325 ProSitePatterns PS00760 Signal peptidases I lysine active site. 146 158 - T 15-10-2018 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GO:0008236|GO:0016021 AM378_13600 5b6effa31dbe8fde506ee35befaf4a39 325 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 144 156 1.0E-25 T 15-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 AM378_13600 5b6effa31dbe8fde506ee35befaf4a39 325 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 265 284 1.0E-25 T 15-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 AM378_13600 5b6effa31dbe8fde506ee35befaf4a39 325 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 80 96 1.0E-25 T 15-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 AM378_13600 5b6effa31dbe8fde506ee35befaf4a39 325 Pfam PF00717 Peptidase S24-like 86 166 2.4E-20 T 15-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C AM378_13600 5b6effa31dbe8fde506ee35befaf4a39 325 Pfam PF10502 Signal peptidase, peptidase S26 257 303 1.3E-7 T 15-10-2018 IPR019533 Peptidase S26 AM378_13600 5b6effa31dbe8fde506ee35befaf4a39 325 SUPERFAMILY SSF51306 78 324 6.8E-80 T 15-10-2018 IPR036286 LexA/Signal peptidase-like superfamily AM378_13600 5b6effa31dbe8fde506ee35befaf4a39 325 ProSitePatterns PS00501 Signal peptidases I serine active site. 89 96 - T 15-10-2018 IPR019756 Peptidase S26A, signal peptidase I, serine active site GO:0008236|GO:0016021 Reactome: R-HSA-1799339|Reactome: R-HSA-381771|Reactome: R-HSA-400511|Reactome: R-HSA-422085 AM378_13600 5b6effa31dbe8fde506ee35befaf4a39 325 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 66 305 3.1E-43 T 15-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 AM378_13600 5b6effa31dbe8fde506ee35befaf4a39 325 Gene3D G3DSA:2.10.109.10 80 305 5.2E-75 T 15-10-2018 AM378_13600 5b6effa31dbe8fde506ee35befaf4a39 325 ProSitePatterns PS00761 Signal peptidases I signature 3. 270 283 - T 15-10-2018 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 AM378_13600 5b6effa31dbe8fde506ee35befaf4a39 325 Gene3D G3DSA:2.170.230.10 155 264 5.2E-75 T 15-10-2018 AM378_03945 31856620483d0f983ed29caa0cb3936c 403 ProSitePatterns PS00737 Thiolases signature 2. 349 365 - T 15-10-2018 IPR020613 Thiolase, conserved site GO:0016747 AM378_03945 31856620483d0f983ed29caa0cb3936c 403 SUPERFAMILY SSF53901 279 400 8.99E-38 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 AM378_03945 31856620483d0f983ed29caa0cb3936c 403 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 11 398 2.5E-128 T 15-10-2018 IPR002155 Thiolase GO:0016747 AM378_03945 31856620483d0f983ed29caa0cb3936c 403 SUPERFAMILY SSF53901 8 277 1.23E-74 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 AM378_03945 31856620483d0f983ed29caa0cb3936c 403 PIRSF PIRSF000429 2 403 2.9E-122 T 15-10-2018 IPR002155 Thiolase GO:0016747 AM378_03945 31856620483d0f983ed29caa0cb3936c 403 Pfam PF02803 Thiolase, C-terminal domain 279 400 1.6E-38 T 15-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 AM378_03945 31856620483d0f983ed29caa0cb3936c 403 Gene3D G3DSA:3.40.47.10 144 397 2.3E-143 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 AM378_03945 31856620483d0f983ed29caa0cb3936c 403 ProSitePatterns PS00099 Thiolases active site. 384 397 - T 15-10-2018 IPR020610 Thiolase, active site GO:0016747 AM378_03945 31856620483d0f983ed29caa0cb3936c 403 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 89 107 - T 15-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 AM378_03945 31856620483d0f983ed29caa0cb3936c 403 Gene3D G3DSA:3.40.47.10 11 284 2.3E-143 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 AM378_03945 31856620483d0f983ed29caa0cb3936c 403 Pfam PF00108 Thiolase, N-terminal domain 8 269 7.3E-74 T 15-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 AM378_07535 9c582fd2aff2b35210a4d6afddf3dc67 464 PIRSF PIRSF000204 1 464 1.6E-238 T 15-10-2018 IPR012136 NADP transhydrogenase, beta subunit GO:0008750|GO:0016021|GO:0050661|GO:0055114 KEGG: 00760+1.6.1.2 AM378_07535 9c582fd2aff2b35210a4d6afddf3dc67 464 SUPERFAMILY SSF52467 289 463 3.07E-77 T 15-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily AM378_07535 9c582fd2aff2b35210a4d6afddf3dc67 464 Gene3D G3DSA:3.40.50.1220 286 464 6.3E-87 T 15-10-2018 AM378_07535 9c582fd2aff2b35210a4d6afddf3dc67 464 Pfam PF02233 NAD(P) transhydrogenase beta subunit 7 460 5.0E-203 T 15-10-2018 IPR034300 NADP transhydrogenase beta-like domain KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 AM378_08015 cb983ec364a091a2390d6d00d4c4ab8e 264 SUPERFAMILY SSF46785 11 72 8.39E-14 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM378_08015 cb983ec364a091a2390d6d00d4c4ab8e 264 Gene3D G3DSA:1.10.10.10 9 94 4.4E-6 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_08015 cb983ec364a091a2390d6d00d4c4ab8e 264 SMART SM00420 14 66 8.3E-15 T 15-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AM378_08015 cb983ec364a091a2390d6d00d4c4ab8e 264 SUPERFAMILY SSF100950 82 243 9.21E-24 T 15-10-2018 IPR037171 NagB/RpiA transferase-like AM378_08015 cb983ec364a091a2390d6d00d4c4ab8e 264 SMART SM01134 81 243 4.2E-55 T 15-10-2018 AM378_08015 cb983ec364a091a2390d6d00d4c4ab8e 264 Pfam PF08220 DeoR-like helix-turn-helix domain 14 68 7.5E-15 T 15-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AM378_08015 cb983ec364a091a2390d6d00d4c4ab8e 264 Pfam PF00455 DeoR C terminal sensor domain 83 241 5.9E-43 T 15-10-2018 IPR014036 DeoR C-terminal sensor domain AM378_17240 defe3c9cc42e6a6ca551dad50c419f93 269 Pfam PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase 3 208 3.2E-12 T 15-10-2018 IPR002591 Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase GO:0003824 AM378_17240 defe3c9cc42e6a6ca551dad50c419f93 269 Gene3D G3DSA:3.40.720.10 1 267 3.9E-29 T 15-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 AM378_17240 defe3c9cc42e6a6ca551dad50c419f93 269 SUPERFAMILY SSF53649 2 251 1.62E-44 T 15-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 AM378_00395 5231ef5ce25387dddd5ce582dfd52393 301 Gene3D G3DSA:3.30.479.30 46 178 9.0E-43 T 15-10-2018 AM378_00395 5231ef5ce25387dddd5ce582dfd52393 301 PRINTS PR00721 Stomatin signature 128 151 4.5E-27 T 15-10-2018 IPR001972 Stomatin family GO:0016020 AM378_00395 5231ef5ce25387dddd5ce582dfd52393 301 PRINTS PR00721 Stomatin signature 108 125 4.5E-27 T 15-10-2018 IPR001972 Stomatin family GO:0016020 AM378_00395 5231ef5ce25387dddd5ce582dfd52393 301 PRINTS PR00721 Stomatin signature 152 170 4.5E-27 T 15-10-2018 IPR001972 Stomatin family GO:0016020 AM378_00395 5231ef5ce25387dddd5ce582dfd52393 301 PRINTS PR00721 Stomatin signature 73 94 4.5E-27 T 15-10-2018 IPR001972 Stomatin family GO:0016020 AM378_00395 5231ef5ce25387dddd5ce582dfd52393 301 PRINTS PR00721 Stomatin signature 171 192 4.5E-27 T 15-10-2018 IPR001972 Stomatin family GO:0016020 AM378_00395 5231ef5ce25387dddd5ce582dfd52393 301 Pfam PF01145 SPFH domain / Band 7 family 22 200 4.4E-32 T 15-10-2018 IPR001107 Band 7 domain AM378_00395 5231ef5ce25387dddd5ce582dfd52393 301 SUPERFAMILY SSF117892 49 183 1.44E-40 T 15-10-2018 IPR036013 Band 7/SPFH domain superfamily AM378_00395 5231ef5ce25387dddd5ce582dfd52393 301 SMART SM00244 18 176 2.1E-58 T 15-10-2018 IPR001107 Band 7 domain AM378_00395 5231ef5ce25387dddd5ce582dfd52393 301 ProSitePatterns PS01270 Band 7 protein family signature. 132 160 - T 15-10-2018 IPR018080 Band 7/stomatin-like, conserved site AM378_11335 dacdf4ead55d4f0223ba0a9fed0af11c 279 ProSitePatterns PS00731 AP endonucleases family 2 signature 3. 215 231 - T 15-10-2018 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 AM378_11335 dacdf4ead55d4f0223ba0a9fed0af11c 279 TIGRFAM TIGR00587 nfo: apurinic endonuclease (APN1) 3 276 5.5E-107 T 15-10-2018 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 AM378_11335 dacdf4ead55d4f0223ba0a9fed0af11c 279 SMART SM00518 3 279 7.7E-129 T 15-10-2018 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 AM378_11335 dacdf4ead55d4f0223ba0a9fed0af11c 279 Gene3D G3DSA:3.20.20.150 1 279 6.5E-110 T 15-10-2018 AM378_11335 dacdf4ead55d4f0223ba0a9fed0af11c 279 Hamap MF_00152 Probable endonuclease 4 [nfo]. 2 279 43.419 T 15-10-2018 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 AM378_11335 dacdf4ead55d4f0223ba0a9fed0af11c 279 Pfam PF01261 Xylose isomerase-like TIM barrel 20 239 2.6E-41 T 15-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain AM378_11335 dacdf4ead55d4f0223ba0a9fed0af11c 279 ProSitePatterns PS00730 AP endonucleases family 2 signature 2. 175 182 - T 15-10-2018 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 AM378_11335 dacdf4ead55d4f0223ba0a9fed0af11c 279 ProSitePatterns PS00729 AP endonucleases family 2 signature 1. 69 77 - T 15-10-2018 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 AM378_11335 dacdf4ead55d4f0223ba0a9fed0af11c 279 SUPERFAMILY SSF51658 1 277 3.67E-101 T 15-10-2018 IPR036237 Xylose isomerase-like superfamily AM378_03955 682a6228b4881ae6f3b300ae20d72919 238 SUPERFAMILY SSF46894 171 237 1.22E-15 T 15-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AM378_03955 682a6228b4881ae6f3b300ae20d72919 238 Pfam PF00196 Bacterial regulatory proteins, luxR family 176 231 1.3E-17 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM378_03955 682a6228b4881ae6f3b300ae20d72919 238 Gene3D G3DSA:1.10.10.10 172 238 1.1E-23 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_03955 682a6228b4881ae6f3b300ae20d72919 238 SMART SM00421 175 232 8.9E-18 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM378_03955 682a6228b4881ae6f3b300ae20d72919 238 SUPERFAMILY SSF75516 11 164 2.22E-30 T 15-10-2018 IPR036693 Transcription factor LuxR-like, autoinducer-binding domain superfamily AM378_03955 682a6228b4881ae6f3b300ae20d72919 238 ProSitePatterns PS00622 LuxR-type HTH domain signature. 192 219 - T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM378_03955 682a6228b4881ae6f3b300ae20d72919 238 Pfam PF03472 Autoinducer binding domain 20 161 5.8E-31 T 15-10-2018 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain AM378_03955 682a6228b4881ae6f3b300ae20d72919 238 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 192 208 8.3E-11 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM378_03955 682a6228b4881ae6f3b300ae20d72919 238 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 208 220 8.3E-11 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM378_03955 682a6228b4881ae6f3b300ae20d72919 238 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 178 192 8.3E-11 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM378_03955 682a6228b4881ae6f3b300ae20d72919 238 Gene3D G3DSA:3.30.450.80 4 169 2.8E-34 T 15-10-2018 IPR036693 Transcription factor LuxR-like, autoinducer-binding domain superfamily AM378_08200 3e352dea21a810fdec3885eecb39f353 344 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 62 76 - T 15-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 AM378_08200 3e352dea21a810fdec3885eecb39f353 344 SUPERFAMILY SSF50129 1 174 3.65E-51 T 15-10-2018 IPR011032 GroES-like superfamily AM378_08200 3e352dea21a810fdec3885eecb39f353 344 SMART SM00829 10 341 2.3E-5 T 15-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AM378_08200 3e352dea21a810fdec3885eecb39f353 344 Gene3D G3DSA:3.40.50.720 153 289 1.6E-98 T 15-10-2018 AM378_08200 3e352dea21a810fdec3885eecb39f353 344 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 25 135 2.0E-24 T 15-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AM378_08200 3e352dea21a810fdec3885eecb39f353 344 SUPERFAMILY SSF51735 139 307 4.32E-35 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily AM378_08200 3e352dea21a810fdec3885eecb39f353 344 Gene3D G3DSA:3.90.180.10 9 328 1.6E-98 T 15-10-2018 AM378_08200 3e352dea21a810fdec3885eecb39f353 344 Pfam PF00107 Zinc-binding dehydrogenase 176 302 2.0E-18 T 15-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AM378_22900 54f3470980f1e8a006ce353e646157fc 250 Pfam PF07072 Cell division protein 22 228 6.6E-79 T 15-10-2018 IPR009777 Cell division protein ZapD AM378_22900 54f3470980f1e8a006ce353e646157fc 250 Gene3D G3DSA:2.60.440.10 9 250 5.8E-85 T 15-10-2018 IPR027462 Z ring-associated protein D, C-terminal AM378_22900 54f3470980f1e8a006ce353e646157fc 250 Gene3D G3DSA:1.10.3900.10 16 182 5.8E-85 T 15-10-2018 AM378_22900 54f3470980f1e8a006ce353e646157fc 250 Hamap MF_01092 Cell division protein ZapD [zapD]. 7 250 32.844 T 15-10-2018 IPR009777 Cell division protein ZapD AM378_22900 54f3470980f1e8a006ce353e646157fc 250 SUPERFAMILY SSF160950 7 250 9.42E-91 T 15-10-2018 IPR036268 ZapD domain superfamily AM378_07725 a5ebced67aa50e7c03e8f4db95cc23b4 523 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 419 428 - T 15-10-2018 IPR025944 Sigma-54 interaction domain, conserved site AM378_07725 a5ebced67aa50e7c03e8f4db95cc23b4 523 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 230 243 - T 15-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 AM378_07725 a5ebced67aa50e7c03e8f4db95cc23b4 523 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 292 307 - T 15-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AM378_07725 a5ebced67aa50e7c03e8f4db95cc23b4 523 SUPERFAMILY SSF55021 2 69 4.06E-5 T 15-10-2018 AM378_07725 a5ebced67aa50e7c03e8f4db95cc23b4 523 Gene3D G3DSA:3.30.450.20 82 190 1.1E-29 T 15-10-2018 AM378_07725 a5ebced67aa50e7c03e8f4db95cc23b4 523 SMART SM00382 226 370 9.8E-8 T 15-10-2018 IPR003593 AAA+ ATPase domain AM378_07725 a5ebced67aa50e7c03e8f4db95cc23b4 523 SUPERFAMILY SSF46689 459 513 7.62E-10 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AM378_07725 a5ebced67aa50e7c03e8f4db95cc23b4 523 SUPERFAMILY SSF55785 77 175 8.03E-9 T 15-10-2018 IPR035965 PAS domain superfamily AM378_07725 a5ebced67aa50e7c03e8f4db95cc23b4 523 Gene3D G3DSA:1.10.8.60 377 444 1.6E-17 T 15-10-2018 AM378_07725 a5ebced67aa50e7c03e8f4db95cc23b4 523 TIGRFAM TIGR04381 HTH_TypR: TyrR family helix-turn-helix domain 466 513 1.1E-27 T 15-10-2018 IPR030828 TyrR family, helix-turn-helix domain GO:0003677 AM378_07725 a5ebced67aa50e7c03e8f4db95cc23b4 523 Pfam PF00158 Sigma-54 interaction domain 207 372 1.1E-62 T 15-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 AM378_07725 a5ebced67aa50e7c03e8f4db95cc23b4 523 Gene3D G3DSA:3.40.50.300 193 376 1.3E-61 T 15-10-2018 AM378_07725 a5ebced67aa50e7c03e8f4db95cc23b4 523 SMART SM00091 80 146 2.7E-7 T 15-10-2018 IPR000014 PAS domain AM378_07725 a5ebced67aa50e7c03e8f4db95cc23b4 523 Pfam PF00989 PAS fold 82 167 2.0E-6 T 15-10-2018 IPR013767 PAS fold GO:0006355 AM378_07725 a5ebced67aa50e7c03e8f4db95cc23b4 523 Gene3D G3DSA:1.10.10.60 456 514 2.0E-26 T 15-10-2018 AM378_07725 a5ebced67aa50e7c03e8f4db95cc23b4 523 SUPERFAMILY SSF52540 206 447 1.54E-63 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_07725 a5ebced67aa50e7c03e8f4db95cc23b4 523 Gene3D G3DSA:3.30.70.260 1 81 2.3E-27 T 15-10-2018 AM378_14235 ff5f7ec368a1a893bda636bfefd330e1 712 SUPERFAMILY SSF55904 567 707 5.62E-42 T 15-10-2018 IPR036633 Orn/Lys/Arg decarboxylase, C-terminal domain superfamily GO:0003824 AM378_14235 ff5f7ec368a1a893bda636bfefd330e1 712 SUPERFAMILY SSF53383 130 562 2.24E-101 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM378_14235 ff5f7ec368a1a893bda636bfefd330e1 712 Pfam PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain 570 699 3.6E-45 T 15-10-2018 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 AM378_14235 ff5f7ec368a1a893bda636bfefd330e1 712 PIRSF PIRSF009393 1 712 9.3E-274 T 15-10-2018 IPR011193 Ornithine/lysine/arginine decarboxylase GO:0005737|GO:0006520|GO:0016831 AM378_14235 ff5f7ec368a1a893bda636bfefd330e1 712 ProSitePatterns PS00703 Orn/Lys/Arg decarboxylases family 1 pyridoxal-P attachment site. 362 376 - T 15-10-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 AM378_14235 ff5f7ec368a1a893bda636bfefd330e1 712 Gene3D G3DSA:3.40.50.2300 1 129 6.7E-55 T 15-10-2018 AM378_14235 ff5f7ec368a1a893bda636bfefd330e1 712 Pfam PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain 14 124 2.3E-28 T 15-10-2018 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal GO:0016831 AM378_14235 ff5f7ec368a1a893bda636bfefd330e1 712 Pfam PF01276 Orn/Lys/Arg decarboxylase, major domain 130 545 5.0E-186 T 15-10-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 AM378_14235 ff5f7ec368a1a893bda636bfefd330e1 712 Gene3D G3DSA:3.40.640.10 130 424 7.7E-88 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AM378_14235 ff5f7ec368a1a893bda636bfefd330e1 712 Gene3D G3DSA:3.90.100.10 595 712 2.3E-44 T 15-10-2018 AM378_14235 ff5f7ec368a1a893bda636bfefd330e1 712 Gene3D G3DSA:3.90.1150.10 425 594 9.2E-70 T 15-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AM378_12630 229ef7d090e65d12707b0e900527bef2 279 Gene3D G3DSA:1.10.3720.10 17 272 6.5E-69 T 15-10-2018 IPR035906 MetI-like superfamily AM378_12630 229ef7d090e65d12707b0e900527bef2 279 TIGRFAM TIGR02139 permease_CysT: sulfate ABC transporter, permease protein CysT 10 272 4.6E-113 T 15-10-2018 IPR011865 Sulphate ABC transporter, permease protein CysT GO:0008272|GO:0015116|GO:0016021 AM378_12630 229ef7d090e65d12707b0e900527bef2 279 SUPERFAMILY SSF161098 19 266 2.35E-57 T 15-10-2018 IPR035906 MetI-like superfamily AM378_12630 229ef7d090e65d12707b0e900527bef2 279 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 77 275 9.3E-33 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AM378_12630 229ef7d090e65d12707b0e900527bef2 279 TIGRFAM TIGR00969 3a0106s02: sulfate ABC transporter, permease protein 3 270 2.4E-112 T 15-10-2018 IPR005667 Sulphate ABC transporter permease protein 2 GO:0008272|GO:0015419|GO:0016020 AM378_02975 2938e3443a9baccbe44c760c206a087c 218 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 3 188 1.4E-25 T 15-10-2018 AM378_02975 2938e3443a9baccbe44c760c206a087c 218 Gene3D G3DSA:3.40.50.1000 3 213 1.1E-69 T 15-10-2018 IPR023214 HAD superfamily AM378_02975 2938e3443a9baccbe44c760c206a087c 218 Gene3D G3DSA:1.20.1440.100 15 87 1.1E-69 T 15-10-2018 AM378_02975 2938e3443a9baccbe44c760c206a087c 218 SUPERFAMILY SSF56784 1 206 4.41E-29 T 15-10-2018 IPR036412 HAD-like superfamily AM378_02975 2938e3443a9baccbe44c760c206a087c 218 Pfam PF12710 haloacid dehalogenase-like hydrolase 4 188 5.0E-40 T 15-10-2018 AM378_02975 2938e3443a9baccbe44c760c206a087c 218 TIGRFAM TIGR01490 HAD-SF-IB-hyp1: HAD hydrolase, family IB 3 201 4.6E-52 T 15-10-2018 IPR006385 HAD-superfamily hydrolase, subfamily IB, SerB1-like AM378_09570 445891ee91f00b9d0b641030859801d6 282 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 234 249 2.1E-5 T 15-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM378_09570 445891ee91f00b9d0b641030859801d6 282 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 249 265 2.1E-5 T 15-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM378_09570 445891ee91f00b9d0b641030859801d6 282 SMART SM00342 183 265 1.2E-18 T 15-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM378_09570 445891ee91f00b9d0b641030859801d6 282 Gene3D G3DSA:1.10.10.60 163 272 5.6E-21 T 15-10-2018 AM378_09570 445891ee91f00b9d0b641030859801d6 282 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 219 261 - T 15-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AM378_09570 445891ee91f00b9d0b641030859801d6 282 SUPERFAMILY SSF46689 218 269 2.33E-11 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AM378_09570 445891ee91f00b9d0b641030859801d6 282 Pfam PF12833 Helix-turn-helix domain 190 265 1.7E-12 T 15-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM378_00870 7b58505195c8a4b7bf57215efcea09f7 885 SUPERFAMILY SSF55545 205 337 1.06E-26 T 15-10-2018 IPR029018 Beta-hexosaminidase-like, domain 2 AM378_00870 7b58505195c8a4b7bf57215efcea09f7 885 Pfam PF03174 Chitobiase/beta-hexosaminidase C-terminal domain 806 881 1.3E-32 T 15-10-2018 IPR004867 Chitobiase C-terminal domain KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 AM378_00870 7b58505195c8a4b7bf57215efcea09f7 885 Pfam PF03173 Putative carbohydrate binding domain 37 195 1.2E-62 T 15-10-2018 IPR004866 Chitobiase/beta-hexosaminidases, N-terminal domain KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 AM378_00870 7b58505195c8a4b7bf57215efcea09f7 885 Gene3D G3DSA:2.60.40.10 820 885 1.5E-30 T 15-10-2018 IPR013783 Immunoglobulin-like fold AM378_00870 7b58505195c8a4b7bf57215efcea09f7 885 PRINTS PR00738 Glycosyl hydrolase family 20 signature 502 520 1.1E-45 T 15-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 AM378_00870 7b58505195c8a4b7bf57215efcea09f7 885 PRINTS PR00738 Glycosyl hydrolase family 20 signature 332 349 1.1E-45 T 15-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 AM378_00870 7b58505195c8a4b7bf57215efcea09f7 885 PRINTS PR00738 Glycosyl hydrolase family 20 signature 729 745 1.1E-45 T 15-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 AM378_00870 7b58505195c8a4b7bf57215efcea09f7 885 PRINTS PR00738 Glycosyl hydrolase family 20 signature 747 764 1.1E-45 T 15-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 AM378_00870 7b58505195c8a4b7bf57215efcea09f7 885 PRINTS PR00738 Glycosyl hydrolase family 20 signature 435 452 1.1E-45 T 15-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 AM378_00870 7b58505195c8a4b7bf57215efcea09f7 885 PRINTS PR00738 Glycosyl hydrolase family 20 signature 361 382 1.1E-45 T 15-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 AM378_00870 7b58505195c8a4b7bf57215efcea09f7 885 PRINTS PR00738 Glycosyl hydrolase family 20 signature 529 542 1.1E-45 T 15-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 AM378_00870 7b58505195c8a4b7bf57215efcea09f7 885 PRINTS PR00738 Glycosyl hydrolase family 20 signature 298 318 1.1E-45 T 15-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 AM378_00870 7b58505195c8a4b7bf57215efcea09f7 885 Gene3D G3DSA:3.30.379.10 210 335 1.6E-23 T 15-10-2018 IPR029018 Beta-hexosaminidase-like, domain 2 AM378_00870 7b58505195c8a4b7bf57215efcea09f7 885 Pfam PF00728 Glycosyl hydrolase family 20, catalytic domain 338 765 6.9E-114 T 15-10-2018 IPR015883 Glycoside hydrolase family 20, catalytic domain GO:0004553|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 AM378_00870 7b58505195c8a4b7bf57215efcea09f7 885 SMART SM01081 36 197 4.6E-92 T 15-10-2018 IPR004866 Chitobiase/beta-hexosaminidases, N-terminal domain KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 AM378_00870 7b58505195c8a4b7bf57215efcea09f7 885 SUPERFAMILY SSF81296 782 885 8.82E-40 T 15-10-2018 IPR014756 Immunoglobulin E-set AM378_00870 7b58505195c8a4b7bf57215efcea09f7 885 SUPERFAMILY SSF49384 29 199 7.32E-66 T 15-10-2018 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily GO:0030246 AM378_00870 7b58505195c8a4b7bf57215efcea09f7 885 SUPERFAMILY SSF51445 338 774 4.48E-144 T 15-10-2018 IPR017853 Glycoside hydrolase superfamily AM378_00870 7b58505195c8a4b7bf57215efcea09f7 885 Gene3D G3DSA:3.20.20.80 336 819 3.4E-170 T 15-10-2018 AM378_00870 7b58505195c8a4b7bf57215efcea09f7 885 Gene3D G3DSA:2.60.40.290 28 169 8.6E-58 T 15-10-2018 IPR012291 CBM2, carbohydrate-binding domain superfamily GO:0004553|GO:0030247 AM378_00870 7b58505195c8a4b7bf57215efcea09f7 885 Pfam PF02838 Glycosyl hydrolase family 20, domain 2 216 334 5.1E-15 T 15-10-2018 IPR015882 Beta-hexosaminidase, bacterial type, N-terminal AM378_22780 3bb3766c5eff687e3a218f7d533ccbda 164 Gene3D G3DSA:3.30.70.260 1 80 8.0E-35 T 15-10-2018 AM378_22780 3bb3766c5eff687e3a218f7d533ccbda 164 SUPERFAMILY SSF55021 80 163 9.16E-26 T 15-10-2018 AM378_22780 3bb3766c5eff687e3a218f7d533ccbda 164 Gene3D G3DSA:3.30.70.1150 81 158 5.2E-27 T 15-10-2018 IPR027271 Acetolactate synthase/Transcription factor NikR, C-terminal AM378_22780 3bb3766c5eff687e3a218f7d533ccbda 164 Pfam PF01842 ACT domain 5 69 3.1E-15 T 15-10-2018 IPR002912 ACT domain AM378_22780 3bb3766c5eff687e3a218f7d533ccbda 164 TIGRFAM TIGR00119 acolac_sm: acetolactate synthase, small subunit 2 160 5.1E-67 T 15-10-2018 IPR004789 Acetolactate synthase, small subunit GO:0003984|GO:0009082 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 AM378_22780 3bb3766c5eff687e3a218f7d533ccbda 164 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 2 77 1.0E-36 T 15-10-2018 AM378_22780 3bb3766c5eff687e3a218f7d533ccbda 164 SUPERFAMILY SSF55021 3 75 2.75E-22 T 15-10-2018 AM378_22780 3bb3766c5eff687e3a218f7d533ccbda 164 Pfam PF10369 Small subunit of acetolactate synthase 85 159 1.1E-23 T 15-10-2018 IPR019455 Acetolactate synthase, small subunit, C-terminal KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 AM378_02990 6d1a92f2e890865139bbaa48998c5dab 455 Pfam PF00571 CBS domain 400 449 1.7E-5 T 15-10-2018 IPR000644 CBS domain AM378_02990 6d1a92f2e890865139bbaa48998c5dab 455 Pfam PF00571 CBS domain 344 388 9.2E-6 T 15-10-2018 IPR000644 CBS domain AM378_02990 6d1a92f2e890865139bbaa48998c5dab 455 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 10 301 3.8E-64 T 15-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme AM378_02990 6d1a92f2e890865139bbaa48998c5dab 455 SUPERFAMILY SSF53686 4 320 7.6E-96 T 15-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme AM378_02990 6d1a92f2e890865139bbaa48998c5dab 455 SMART SM00116 342 389 0.0039 T 15-10-2018 IPR000644 CBS domain AM378_02990 6d1a92f2e890865139bbaa48998c5dab 455 SMART SM00116 403 451 99.0 T 15-10-2018 IPR000644 CBS domain AM378_02990 6d1a92f2e890865139bbaa48998c5dab 455 Gene3D G3DSA:3.10.580.10 335 454 1.7E-17 T 15-10-2018 AM378_02990 6d1a92f2e890865139bbaa48998c5dab 455 Gene3D G3DSA:3.40.50.1100 40 153 6.3E-110 T 15-10-2018 AM378_02990 6d1a92f2e890865139bbaa48998c5dab 455 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 32 50 - T 15-10-2018 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 AM378_02990 6d1a92f2e890865139bbaa48998c5dab 455 SUPERFAMILY SSF54631 344 452 6.7E-19 T 15-10-2018 AM378_02990 6d1a92f2e890865139bbaa48998c5dab 455 Gene3D G3DSA:3.40.50.1100 9 309 6.3E-110 T 15-10-2018 AM378_03735 bd2d4d3095db4ca421b4900bf5fcebe8 684 SUPERFAMILY SSF52540 195 675 1.78E-80 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_03735 bd2d4d3095db4ca421b4900bf5fcebe8 684 Gene3D G3DSA:3.40.50.300 190 334 1.7E-27 T 15-10-2018 AM378_03735 bd2d4d3095db4ca421b4900bf5fcebe8 684 Pfam PF12462 DNA helicase IV / RNA helicase N terminal 1 164 4.4E-67 T 15-10-2018 IPR022161 DNA helicase IV, N-terminal domain AM378_03735 bd2d4d3095db4ca421b4900bf5fcebe8 684 Pfam PF13361 UvrD-like helicase C-terminal domain 563 659 2.9E-12 T 15-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 AM378_03735 bd2d4d3095db4ca421b4900bf5fcebe8 684 Gene3D G3DSA:3.40.50.300 500 682 5.7E-24 T 15-10-2018 AM378_03735 bd2d4d3095db4ca421b4900bf5fcebe8 684 Pfam PF00580 UvrD/REP helicase N-terminal domain 197 488 1.6E-39 T 15-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 AM378_03735 bd2d4d3095db4ca421b4900bf5fcebe8 684 Gene3D G3DSA:3.40.50.300 345 499 1.7E-21 T 15-10-2018 AM378_04135 1ddf98424fea9865d62c421b94814320 573 Gene3D G3DSA:3.30.465.10 491 569 1.8E-11 T 15-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 AM378_04135 1ddf98424fea9865d62c421b94814320 573 SUPERFAMILY SSF116726 414 483 1.57E-10 T 15-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 AM378_04135 1ddf98424fea9865d62c421b94814320 573 Pfam PF00999 Sodium/hydrogen exchanger family 15 388 3.8E-57 T 15-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 AM378_04135 1ddf98424fea9865d62c421b94814320 573 Hamap MF_01075 K(+)/H(+) antiporter NhaP2 [nhaP2]. 1 573 50.415 T 15-10-2018 IPR023729 K(+)/H(+) antiporter NhaP2 GO:0005451|GO:0006812|GO:0006813|GO:0006884|GO:0016021 AM378_04135 1ddf98424fea9865d62c421b94814320 573 SMART SM01091 492 572 4.7E-22 T 15-10-2018 IPR005170 Transporter-associated domain AM378_04135 1ddf98424fea9865d62c421b94814320 573 Gene3D G3DSA:1.20.1530.20 7 392 4.8E-17 T 15-10-2018 IPR038770 Sodium/solute symporter superfamily AM378_04135 1ddf98424fea9865d62c421b94814320 573 Pfam PF03471 Transporter associated domain 493 570 1.7E-14 T 15-10-2018 IPR005170 Transporter-associated domain AM378_04135 1ddf98424fea9865d62c421b94814320 573 Pfam PF02080 TrkA-C domain 421 477 8.3E-11 T 15-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AM378_04135 1ddf98424fea9865d62c421b94814320 573 Gene3D G3DSA:3.30.70.1450 408 483 2.3E-11 T 15-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 AM378_04135 1ddf98424fea9865d62c421b94814320 573 SUPERFAMILY SSF56176 497 570 6.54E-13 T 15-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 AM378_23070 c610e038521ef7bb8f26978726a22959 571 Hamap MF_01540 Sulfite reductase [NADPH] hemoprotein beta-component [cysI]. 10 571 58.771 T 15-10-2018 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit GO:0004783|GO:0008652|GO:0009337|GO:0050661|GO:0051539 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AM378_23070 c610e038521ef7bb8f26978726a22959 571 SUPERFAMILY SSF56014 150 344 2.62E-60 T 15-10-2018 AM378_23070 c610e038521ef7bb8f26978726a22959 571 Gene3D G3DSA:3.30.413.10 426 568 5.7E-36 T 15-10-2018 AM378_23070 c610e038521ef7bb8f26978726a22959 571 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 431 548 0.034 T 15-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AM378_23070 c610e038521ef7bb8f26978726a22959 571 SUPERFAMILY SSF56014 429 561 1.83E-35 T 15-10-2018 AM378_23070 c610e038521ef7bb8f26978726a22959 571 SUPERFAMILY SSF55124 14 142 1.54E-26 T 15-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AM378_23070 c610e038521ef7bb8f26978726a22959 571 PRINTS PR00397 Sirohaem Fe-binding site signature 478 496 1.4E-8 T 15-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AM378_23070 c610e038521ef7bb8f26978726a22959 571 PRINTS PR00397 Sirohaem Fe-binding site signature 430 448 1.4E-8 T 15-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AM378_23070 c610e038521ef7bb8f26978726a22959 571 Gene3D G3DSA:3.30.413.10 196 335 7.6E-44 T 15-10-2018 AM378_23070 c610e038521ef7bb8f26978726a22959 571 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 173 329 2.1E-47 T 15-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AM378_23070 c610e038521ef7bb8f26978726a22959 571 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 478 494 - T 15-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AM378_23070 c610e038521ef7bb8f26978726a22959 571 Gene3D G3DSA:3.90.480.10 336 423 1.3E-31 T 15-10-2018 AM378_23070 c610e038521ef7bb8f26978726a22959 571 Gene3D G3DSA:3.90.480.10 81 167 1.9E-22 T 15-10-2018 AM378_23070 c610e038521ef7bb8f26978726a22959 571 SUPERFAMILY SSF55124 346 423 2.62E-22 T 15-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AM378_23070 c610e038521ef7bb8f26978726a22959 571 TIGRFAM TIGR02041 CysI: sulfite reductase (NADPH) hemoprotein, beta-component 19 559 1.0E-294 T 15-10-2018 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit GO:0004783|GO:0008652|GO:0009337|GO:0050661|GO:0051539 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AM378_23070 c610e038521ef7bb8f26978726a22959 571 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 355 417 6.3E-15 T 15-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AM378_23070 c610e038521ef7bb8f26978726a22959 571 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 80 139 6.0E-14 T 15-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AM378_23635 04f08c171a631ed2f404f735719aa048 133 Gene3D G3DSA:3.30.310.230 1 133 2.7E-59 T 15-10-2018 IPR038208 Sigma factor-binding protein Crl superfamily GO:0045893 AM378_23635 04f08c171a631ed2f404f735719aa048 133 Pfam PF07417 Transcriptional regulator Crl 5 122 2.1E-55 T 15-10-2018 IPR009986 Sigma factor-binding protein Crl GO:0045893 AM378_23635 04f08c171a631ed2f404f735719aa048 133 Hamap MF_01178 Sigma factor-binding protein Crl [crl]. 3 128 32.636 T 15-10-2018 IPR009986 Sigma factor-binding protein Crl GO:0045893 AM378_23000 2d217af744302302cd6944d4f0fed5ff 743 Gene3D G3DSA:3.10.20.30 399 472 7.7E-33 T 15-10-2018 IPR012675 Beta-grasp domain superfamily AM378_23000 2d217af744302302cd6944d4f0fed5ff 743 Pfam PF02824 TGS domain 405 464 5.5E-21 T 15-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 AM378_23000 2d217af744302302cd6944d4f0fed5ff 743 Pfam PF13328 HD domain 46 191 1.5E-42 T 15-10-2018 IPR003607 HD/PDEase domain AM378_23000 2d217af744302302cd6944d4f0fed5ff 743 SMART SM00954 251 361 6.2E-66 T 15-10-2018 IPR007685 RelA/SpoT GO:0015969 AM378_23000 2d217af744302302cd6944d4f0fed5ff 743 Pfam PF04607 Region found in RelA / SpoT proteins 251 360 2.2E-36 T 15-10-2018 IPR007685 RelA/SpoT GO:0015969 AM378_23000 2d217af744302302cd6944d4f0fed5ff 743 Gene3D G3DSA:3.30.460.10 208 341 5.6E-49 T 15-10-2018 AM378_23000 2d217af744302302cd6944d4f0fed5ff 743 Gene3D G3DSA:3.30.70.260 662 742 1.4E-18 T 15-10-2018 AM378_23000 2d217af744302302cd6944d4f0fed5ff 743 Pfam PF13291 ACT domain 663 739 1.9E-18 T 15-10-2018 IPR002912 ACT domain AM378_23000 2d217af744302302cd6944d4f0fed5ff 743 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 64 739 2.4E-187 T 15-10-2018 IPR004811 RelA/SpoT family GO:0015969 AM378_23000 2d217af744302302cd6944d4f0fed5ff 743 SUPERFAMILY SSF81271 398 464 6.05E-22 T 15-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 AM378_23000 2d217af744302302cd6944d4f0fed5ff 743 SUPERFAMILY SSF109604 27 207 2.26E-46 T 15-10-2018 AM378_23000 2d217af744302302cd6944d4f0fed5ff 743 Gene3D G3DSA:1.10.3210.10 33 207 1.8E-39 T 15-10-2018 AM378_23000 2d217af744302302cd6944d4f0fed5ff 743 SUPERFAMILY SSF55021 664 740 1.34E-14 T 15-10-2018 AM378_23000 2d217af744302302cd6944d4f0fed5ff 743 SUPERFAMILY SSF81301 196 409 8.01E-64 T 15-10-2018 AM378_10590 4c006ca5565c4434aca5ba60135b3850 310 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 13 71 4.1E-18 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_10590 4c006ca5565c4434aca5ba60135b3850 310 Gene3D G3DSA:3.40.190.10 176 277 7.3E-33 T 15-10-2018 AM378_10590 4c006ca5565c4434aca5ba60135b3850 310 Pfam PF03466 LysR substrate binding domain 102 304 1.3E-25 T 15-10-2018 IPR005119 LysR, substrate-binding AM378_10590 4c006ca5565c4434aca5ba60135b3850 310 SUPERFAMILY SSF53850 102 305 1.86E-29 T 15-10-2018 AM378_10590 4c006ca5565c4434aca5ba60135b3850 310 SUPERFAMILY SSF46785 10 119 2.5E-19 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM378_10590 4c006ca5565c4434aca5ba60135b3850 310 Gene3D G3DSA:1.10.10.10 12 95 1.7E-21 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_10590 4c006ca5565c4434aca5ba60135b3850 310 Gene3D G3DSA:3.40.190.10 103 291 7.3E-33 T 15-10-2018 AM378_10590 4c006ca5565c4434aca5ba60135b3850 310 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 28 39 1.8E-7 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_10590 4c006ca5565c4434aca5ba60135b3850 310 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 49 1.8E-7 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_10590 4c006ca5565c4434aca5ba60135b3850 310 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 49 60 1.8E-7 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_18955 328066c83ec098d222ce72a4bfce8134 161 SUPERFAMILY SSF52374 4 156 7.24E-44 T 15-10-2018 AM378_18955 328066c83ec098d222ce72a4bfce8134 161 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 86 102 2.8E-50 T 15-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 AM378_18955 328066c83ec098d222ce72a4bfce8134 161 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 50 74 2.8E-50 T 15-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 AM378_18955 328066c83ec098d222ce72a4bfce8134 161 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 21 42 2.8E-50 T 15-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 AM378_18955 328066c83ec098d222ce72a4bfce8134 161 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 3 21 2.8E-50 T 15-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 AM378_18955 328066c83ec098d222ce72a4bfce8134 161 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 113 135 2.8E-50 T 15-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 AM378_18955 328066c83ec098d222ce72a4bfce8134 161 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 5 60 1.3E-15 T 15-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 AM378_18955 328066c83ec098d222ce72a4bfce8134 161 TIGRFAM TIGR01510 coaD_prev_kdtB: pantetheine-phosphate adenylyltransferase 5 157 4.2E-59 T 15-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 AM378_18955 328066c83ec098d222ce72a4bfce8134 161 Gene3D G3DSA:3.40.50.620 1 161 5.5E-55 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM378_18955 328066c83ec098d222ce72a4bfce8134 161 Hamap MF_00151 Phosphopantetheine adenylyltransferase [coaD]. 3 159 35.776 T 15-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 AM378_18955 328066c83ec098d222ce72a4bfce8134 161 Pfam PF01467 Cytidylyltransferase-like 6 134 6.1E-19 T 15-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 AM378_04155 a7a2e4838c198d2236c6a246ff0fdb38 535 SUPERFAMILY SSF74650 47 418 4.71E-164 T 15-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 AM378_04155 a7a2e4838c198d2236c6a246ff0fdb38 535 Gene3D G3DSA:2.60.40.10 422 535 1.9E-48 T 15-10-2018 IPR013783 Immunoglobulin-like fold AM378_04155 a7a2e4838c198d2236c6a246ff0fdb38 535 Pfam PF04349 Periplasmic glucan biosynthesis protein, MdoG 47 531 5.0E-197 T 15-10-2018 IPR007444 Glucan biosynthesis, periplasmic, MdoG C-terminal GO:0016051|GO:0042597 AM378_04155 a7a2e4838c198d2236c6a246ff0fdb38 535 PIRSF PIRSF006281 14 535 5.3E-240 T 15-10-2018 IPR014438 Glucan biosynthesis protein MdoG/MdoD AM378_04155 a7a2e4838c198d2236c6a246ff0fdb38 535 SUPERFAMILY SSF81296 422 534 1.68E-33 T 15-10-2018 IPR014756 Immunoglobulin E-set AM378_04155 a7a2e4838c198d2236c6a246ff0fdb38 535 Gene3D G3DSA:2.70.98.10 46 421 2.2E-170 T 15-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 AM378_04155 a7a2e4838c198d2236c6a246ff0fdb38 535 Hamap MF_01069 Glucans biosynthesis protein G [mdoG]. 23 533 62.325 T 15-10-2018 IPR023704 Glucan biosynthesis protein G AM378_19095 9b2d0a2887cae80c128cffe35cd84656 469 ProSitePatterns PS00182 Glutamine synthetase class-I adenylation site. 386 398 - T 15-10-2018 IPR001637 Glutamine synthetase class-I, adenylation site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AM378_19095 9b2d0a2887cae80c128cffe35cd84656 469 ProSitePatterns PS00180 Glutamine synthetase signature 1. 50 68 - T 15-10-2018 IPR027302 Glutamine synthetase, N-terminal conserved site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 AM378_19095 9b2d0a2887cae80c128cffe35cd84656 469 SUPERFAMILY SSF55931 102 468 2.26E-136 T 15-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 AM378_19095 9b2d0a2887cae80c128cffe35cd84656 469 SMART SM01230 102 379 5.8E-147 T 15-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AM378_19095 9b2d0a2887cae80c128cffe35cd84656 469 Pfam PF00120 Glutamine synthetase, catalytic domain 103 466 2.9E-136 T 15-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AM378_19095 9b2d0a2887cae80c128cffe35cd84656 469 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 259 274 - T 15-10-2018 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 AM378_19095 9b2d0a2887cae80c128cffe35cd84656 469 Pfam PF03951 Glutamine synthetase, beta-Grasp domain 14 95 5.8E-32 T 15-10-2018 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 AM378_19095 9b2d0a2887cae80c128cffe35cd84656 469 Gene3D G3DSA:3.10.20.70 2 104 3.8E-42 T 15-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AM378_19095 9b2d0a2887cae80c128cffe35cd84656 469 TIGRFAM TIGR00653 GlnA: glutamine synthetase, type I 4 468 4.7E-214 T 15-10-2018 IPR004809 Glutamine synthetase type I GO:0004356|GO:0005737|GO:0009399 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AM378_19095 9b2d0a2887cae80c128cffe35cd84656 469 SUPERFAMILY SSF54368 3 100 3.4E-37 T 15-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AM378_19095 9b2d0a2887cae80c128cffe35cd84656 469 Gene3D G3DSA:3.30.590.10 105 457 4.1E-148 T 15-10-2018 AM378_06965 5acf36d4ec321169911946de88ceec93 154 SUPERFAMILY SSF46785 11 144 4.83E-19 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM378_06965 5acf36d4ec321169911946de88ceec93 154 Gene3D G3DSA:1.10.10.10 9 144 1.5E-21 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_06965 5acf36d4ec321169911946de88ceec93 154 PRINTS PR00598 Bacterial regulatory protein MarR family signature 70 85 3.1E-7 T 15-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AM378_06965 5acf36d4ec321169911946de88ceec93 154 PRINTS PR00598 Bacterial regulatory protein MarR family signature 119 139 3.1E-7 T 15-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AM378_06965 5acf36d4ec321169911946de88ceec93 154 PRINTS PR00598 Bacterial regulatory protein MarR family signature 53 69 3.1E-7 T 15-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AM378_06965 5acf36d4ec321169911946de88ceec93 154 PRINTS PR00598 Bacterial regulatory protein MarR family signature 89 105 3.1E-7 T 15-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AM378_06965 5acf36d4ec321169911946de88ceec93 154 Pfam PF01047 MarR family 36 92 4.8E-8 T 15-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AM378_06965 5acf36d4ec321169911946de88ceec93 154 SMART SM00347 28 129 4.0E-13 T 15-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AM378_02080 3fdf103c42a4eeac655400b6d83543e4 189 SMART SM00530 15 70 6.9E-16 T 15-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM378_02080 3fdf103c42a4eeac655400b6d83543e4 189 Gene3D G3DSA:2.60.120.10 79 188 3.9E-7 T 15-10-2018 IPR014710 RmlC-like jelly roll fold AM378_02080 3fdf103c42a4eeac655400b6d83543e4 189 SUPERFAMILY SSF51182 64 189 9.24E-19 T 15-10-2018 IPR011051 RmlC-like cupin domain superfamily AM378_02080 3fdf103c42a4eeac655400b6d83543e4 189 Gene3D G3DSA:1.10.260.40 6 78 8.7E-19 T 15-10-2018 AM378_02080 3fdf103c42a4eeac655400b6d83543e4 189 SUPERFAMILY SSF47413 10 78 8.16E-18 T 15-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AM378_02080 3fdf103c42a4eeac655400b6d83543e4 189 Pfam PF01381 Helix-turn-helix 16 68 1.2E-15 T 15-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM378_22430 98f717a8cea0da80df4cd0e8b8a99fdb 172 Gene3D G3DSA:3.90.950.10 1 172 4.3E-59 T 15-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like AM378_22430 98f717a8cea0da80df4cd0e8b8a99fdb 172 TIGRFAM TIGR00258 TIGR00258: inosine/xanthosine triphosphatase 7 170 1.8E-46 T 15-10-2018 IPR002786 Non-canonical purine NTP phosphatase AM378_22430 98f717a8cea0da80df4cd0e8b8a99fdb 172 SUPERFAMILY SSF52972 1 167 1.05E-53 T 15-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like AM378_22430 98f717a8cea0da80df4cd0e8b8a99fdb 172 Pfam PF01931 Protein of unknown function DUF84 7 165 5.2E-50 T 15-10-2018 IPR026533 Non-canonical purine NTP phosphatase/PRRC1 AM378_22430 98f717a8cea0da80df4cd0e8b8a99fdb 172 Hamap MF_00648 Non-canonical purine NTP phosphatase. 2 171 27.905 T 15-10-2018 IPR002786 Non-canonical purine NTP phosphatase AM378_18500 a2c8fca2d9bf6a7211d07c5ccdfaccad 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 2.9E-5 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_18500 a2c8fca2d9bf6a7211d07c5ccdfaccad 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 2.9E-5 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_18500 a2c8fca2d9bf6a7211d07c5ccdfaccad 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 2.9E-5 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_18500 a2c8fca2d9bf6a7211d07c5ccdfaccad 296 Pfam PF03466 LysR substrate binding domain 89 294 3.5E-38 T 15-10-2018 IPR005119 LysR, substrate-binding AM378_18500 a2c8fca2d9bf6a7211d07c5ccdfaccad 296 SUPERFAMILY SSF53850 89 294 6.3E-34 T 15-10-2018 AM378_18500 a2c8fca2d9bf6a7211d07c5ccdfaccad 296 SUPERFAMILY SSF46785 1 111 6.96E-24 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM378_18500 a2c8fca2d9bf6a7211d07c5ccdfaccad 296 Gene3D G3DSA:3.40.190.10 90 291 1.6E-29 T 15-10-2018 AM378_18500 a2c8fca2d9bf6a7211d07c5ccdfaccad 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 4.3E-21 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_18500 a2c8fca2d9bf6a7211d07c5ccdfaccad 296 Gene3D G3DSA:1.10.10.10 1 83 2.4E-24 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_18500 a2c8fca2d9bf6a7211d07c5ccdfaccad 296 Gene3D G3DSA:3.40.190.10 165 269 1.6E-29 T 15-10-2018 AM378_18095 30994da45ce53a6d3039f8302c6249ff 171 Gene3D G3DSA:3.40.630.30 2 168 1.9E-43 T 15-10-2018 AM378_18095 30994da45ce53a6d3039f8302c6249ff 171 Pfam PF00583 Acetyltransferase (GNAT) family 39 137 4.9E-19 T 15-10-2018 IPR000182 GNAT domain AM378_18095 30994da45ce53a6d3039f8302c6249ff 171 SUPERFAMILY SSF55729 4 163 1.32E-37 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase AM378_11390 3823e5455c1a1a910d35977602f0d0b3 190 SMART SM00841 133 188 8.3E-25 T 15-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 AM378_11390 3823e5455c1a1a910d35977602f0d0b3 190 Hamap MF_00646 Elongation factor P-like protein [yeiP]. 2 189 43.223 T 15-10-2018 IPR011897 Translation elongation factor P-like, YeiP AM378_11390 3823e5455c1a1a910d35977602f0d0b3 190 ProSitePatterns PS01275 Elongation factor P signature. 154 173 - T 15-10-2018 IPR013852 Translation elongation factor P/YeiP, conserved site AM378_11390 3823e5455c1a1a910d35977602f0d0b3 190 SMART SM01185 69 125 1.5E-15 T 15-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 AM378_11390 3823e5455c1a1a910d35977602f0d0b3 190 Gene3D G3DSA:2.40.50.140 66 130 5.2E-15 T 15-10-2018 AM378_11390 3823e5455c1a1a910d35977602f0d0b3 190 SUPERFAMILY SSF50249 132 189 8.39E-14 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold AM378_11390 3823e5455c1a1a910d35977602f0d0b3 190 SUPERFAMILY SSF50104 1 64 1.75E-10 T 15-10-2018 IPR008991 Translation protein SH3-like domain superfamily AM378_11390 3823e5455c1a1a910d35977602f0d0b3 190 TIGRFAM TIGR02178 yeiP: elongation factor P-like protein YeiP 3 189 5.6E-97 T 15-10-2018 IPR011897 Translation elongation factor P-like, YeiP AM378_11390 3823e5455c1a1a910d35977602f0d0b3 190 PIRSF PIRSF005901 1 190 8.7E-59 T 15-10-2018 IPR020599 Translation elongation factor P/YeiP AM378_11390 3823e5455c1a1a910d35977602f0d0b3 190 Pfam PF09285 Elongation factor P, C-terminal 133 188 4.2E-18 T 15-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 AM378_11390 3823e5455c1a1a910d35977602f0d0b3 190 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 4 61 2.0E-16 T 15-10-2018 IPR013185 Translation elongation factor, KOW-like AM378_11390 3823e5455c1a1a910d35977602f0d0b3 190 Gene3D G3DSA:2.30.30.30 1 65 7.8E-15 T 15-10-2018 IPR014722 Ribosomal protein L2, domain 2 AM378_11390 3823e5455c1a1a910d35977602f0d0b3 190 SUPERFAMILY SSF50249 67 130 2.74E-11 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold AM378_11390 3823e5455c1a1a910d35977602f0d0b3 190 Gene3D G3DSA:2.40.50.140 132 189 1.2E-19 T 15-10-2018 AM378_11390 3823e5455c1a1a910d35977602f0d0b3 190 Pfam PF01132 Elongation factor P (EF-P) OB domain 70 125 4.0E-13 T 15-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 AM378_18610 b9a78c942c0fab6f9d0ef4cdd7daac37 367 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 299 328 - T 15-10-2018 IPR030390 RNA methyltransferase TrmA, active site AM378_18610 b9a78c942c0fab6f9d0ef4cdd7daac37 367 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 11 365 6.3E-191 T 15-10-2018 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 AM378_18610 b9a78c942c0fab6f9d0ef4cdd7daac37 367 SUPERFAMILY SSF53335 6 365 5.01E-52 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM378_18610 b9a78c942c0fab6f9d0ef4cdd7daac37 367 Gene3D G3DSA:3.40.1350.30 45 189 1.6E-145 T 15-10-2018 AM378_18610 b9a78c942c0fab6f9d0ef4cdd7daac37 367 TIGRFAM TIGR02143 trmA_only: tRNA (uracil(54)-C(5))-methyltransferase 11 365 4.0E-186 T 15-10-2018 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA GO:0006396|GO:0030697 AM378_18610 b9a78c942c0fab6f9d0ef4cdd7daac37 367 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 348 358 - T 15-10-2018 IPR030391 RNA methyltransferase TrmA, conserved site AM378_18610 b9a78c942c0fab6f9d0ef4cdd7daac37 367 Hamap MF_01011 tRNA/tmRNA (uracil-C(5))-methyltransferase [trmA]. 4 366 42.405 T 15-10-2018 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA GO:0006396|GO:0030697 AM378_18610 b9a78c942c0fab6f9d0ef4cdd7daac37 367 Gene3D G3DSA:3.40.50.150 14 362 1.6E-145 T 15-10-2018 AM378_14680 80db907632385508120014e5137c83c1 849 ProSitePatterns PS01151 Fimbrial biogenesis outer membrane usher protein signature. 315 325 - T 15-10-2018 IPR018030 Fimbrial membrane usher, conserved site AM378_14680 80db907632385508120014e5137c83c1 849 Gene3D G3DSA:2.60.40.3110 273 362 9.4E-37 T 15-10-2018 AM378_14680 80db907632385508120014e5137c83c1 849 Pfam PF13954 PapC N-terminal domain 38 186 2.8E-45 T 15-10-2018 IPR025885 PapC, N-terminal domain GO:0005515 AM378_14680 80db907632385508120014e5137c83c1 849 Gene3D G3DSA:2.60.40.2610 673 763 1.7E-34 T 15-10-2018 AM378_14680 80db907632385508120014e5137c83c1 849 SUPERFAMILY SSF141729 64 177 4.58E-31 T 15-10-2018 IPR037224 PapC, N-terminal domain superfamily GO:0005515 AM378_14680 80db907632385508120014e5137c83c1 849 Gene3D G3DSA:2.60.40.2070 764 849 1.5E-26 T 15-10-2018 AM378_14680 80db907632385508120014e5137c83c1 849 Pfam PF13953 PapC C-terminal domain 767 833 3.3E-24 T 15-10-2018 IPR025949 PapC-like, C-terminal domain AM378_14680 80db907632385508120014e5137c83c1 849 Gene3D G3DSA:3.10.20.410 55 174 2.5E-35 T 15-10-2018 AM378_14680 80db907632385508120014e5137c83c1 849 Pfam PF00577 Outer membrane usher protein 203 758 5.7E-196 T 15-10-2018 IPR000015 Outer membrane usher protein GO:0009297|GO:0015473|GO:0016020 AM378_21495 f0fc1e7844c08b07ed99b37252608caf 378 SUPERFAMILY SSF51556 50 345 3.15E-25 T 15-10-2018 IPR032466 Metal-dependent hydrolase AM378_21495 f0fc1e7844c08b07ed99b37252608caf 378 Gene3D G3DSA:3.20.20.140 1 292 1.9E-9 T 15-10-2018 AM378_21495 f0fc1e7844c08b07ed99b37252608caf 378 PIRSF PIRSF038971 1 378 2.1E-162 T 15-10-2018 IPR012696 Phosphonate metabolism PhnM GO:0019700 KEGG: 00440+3.6.1.63|MetaCyc: PWY-7399|MetaCyc: PWY-7805|MetaCyc: PWY-7807 AM378_21495 f0fc1e7844c08b07ed99b37252608caf 378 TIGRFAM TIGR02318 phosphono_phnM: phosphonate metabolism protein PhnM 3 378 3.8E-155 T 15-10-2018 IPR012696 Phosphonate metabolism PhnM GO:0019700 KEGG: 00440+3.6.1.63|MetaCyc: PWY-7399|MetaCyc: PWY-7805|MetaCyc: PWY-7807 AM378_21495 f0fc1e7844c08b07ed99b37252608caf 378 Gene3D G3DSA:2.30.40.10 312 378 1.6E-8 T 15-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 AM378_21495 f0fc1e7844c08b07ed99b37252608caf 378 Pfam PF07969 Amidohydrolase family 214 378 4.7E-11 T 15-10-2018 IPR013108 Amidohydrolase 3 AM378_21495 f0fc1e7844c08b07ed99b37252608caf 378 SUPERFAMILY SSF51338 2 377 1.86E-9 T 15-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 AM378_15070 f47ec6163a127651c3c750c0219e7fde 218 Hamap MF_00170 Ribose-5-phosphate isomerase A [rpiA]. 3 217 34.354 T 15-10-2018 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 AM378_15070 f47ec6163a127651c3c750c0219e7fde 218 Gene3D G3DSA:3.40.50.1360 7 207 5.0E-76 T 15-10-2018 AM378_15070 f47ec6163a127651c3c750c0219e7fde 218 Pfam PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) 49 213 9.2E-59 T 15-10-2018 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 AM378_15070 f47ec6163a127651c3c750c0219e7fde 218 SUPERFAMILY SSF75445 127 198 7.06E-24 T 15-10-2018 AM378_15070 f47ec6163a127651c3c750c0219e7fde 218 Gene3D G3DSA:3.30.70.260 125 196 5.0E-76 T 15-10-2018 AM378_15070 f47ec6163a127651c3c750c0219e7fde 218 SUPERFAMILY SSF100950 1 146 7.33E-48 T 15-10-2018 IPR037171 NagB/RpiA transferase-like AM378_15070 f47ec6163a127651c3c750c0219e7fde 218 TIGRFAM TIGR00021 rpiA: ribose 5-phosphate isomerase A 6 215 7.9E-71 T 15-10-2018 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 AM378_04975 a197786b9e48bad09641d8e86a6db0d5 339 SUPERFAMILY SSF101478 7 320 4.05E-69 T 15-10-2018 IPR036705 ADP-ribosylation/Crystallin J1 superfamily AM378_04975 a197786b9e48bad09641d8e86a6db0d5 339 Pfam PF03747 ADP-ribosylglycohydrolase 12 305 1.4E-60 T 15-10-2018 IPR005502 ADP-ribosylation/Crystallin J1 AM378_04975 a197786b9e48bad09641d8e86a6db0d5 339 Gene3D G3DSA:1.10.4080.10 2 331 1.2E-70 T 15-10-2018 IPR036705 ADP-ribosylation/Crystallin J1 superfamily AM378_20200 7c68bb16f73cfe084d87d26e192704cf 265 Gene3D G3DSA:3.30.1240.10 82 186 2.8E-82 T 15-10-2018 AM378_20200 7c68bb16f73cfe084d87d26e192704cf 265 ProSitePatterns PS01228 Hypothetical cof family signature 1. 4 15 - T 15-10-2018 AM378_20200 7c68bb16f73cfe084d87d26e192704cf 265 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 5 231 1.3E-26 T 15-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 AM378_20200 7c68bb16f73cfe084d87d26e192704cf 265 Pfam PF08282 haloacid dehalogenase-like hydrolase 5 260 6.5E-63 T 15-10-2018 AM378_20200 7c68bb16f73cfe084d87d26e192704cf 265 ProSitePatterns PS01229 Hypothetical cof family signature 2. 212 234 - T 15-10-2018 AM378_20200 7c68bb16f73cfe084d87d26e192704cf 265 Gene3D G3DSA:3.40.50.1000 5 256 2.8E-82 T 15-10-2018 IPR023214 HAD superfamily AM378_20200 7c68bb16f73cfe084d87d26e192704cf 265 SUPERFAMILY SSF56784 1 264 1.45E-69 T 15-10-2018 IPR036412 HAD-like superfamily AM378_20200 7c68bb16f73cfe084d87d26e192704cf 265 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 4 259 1.6E-65 T 15-10-2018 IPR000150 Cof family GO:0016787 AM378_00445 516c58eaf41d6c178c22cbc0fd3a0c4c 419 Pfam PF07690 Major Facilitator Superfamily 21 369 4.5E-49 T 15-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM378_00445 516c58eaf41d6c178c22cbc0fd3a0c4c 419 ProSitePatterns PS00217 Sugar transport proteins signature 2. 110 135 - T 15-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AM378_00445 516c58eaf41d6c178c22cbc0fd3a0c4c 419 Gene3D G3DSA:1.20.1250.20 221 411 2.9E-31 T 15-10-2018 AM378_00445 516c58eaf41d6c178c22cbc0fd3a0c4c 419 SUPERFAMILY SSF103473 6 407 3.01E-70 T 15-10-2018 IPR036259 MFS transporter superfamily AM378_00445 516c58eaf41d6c178c22cbc0fd3a0c4c 419 Gene3D G3DSA:1.20.1250.20 7 199 1.5E-33 T 15-10-2018 AM378_23035 b0556cb59e49fa26172838a6eb14cbe0 464 Pfam PF00324 Amino acid permease 16 451 2.2E-104 T 15-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 AM378_23035 b0556cb59e49fa26172838a6eb14cbe0 464 PIRSF PIRSF006060 1 459 8.9E-70 T 15-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 AM378_23035 b0556cb59e49fa26172838a6eb14cbe0 464 ProSitePatterns PS00218 Amino acid permeases signature. 41 71 - T 15-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 AM378_23035 b0556cb59e49fa26172838a6eb14cbe0 464 Gene3D G3DSA:1.20.1740.10 7 457 2.7E-66 T 15-10-2018 AM378_23155 4b3e07699661adc183c0e65b5173b34b 338 SMART SM00257 82 126 1.9E-10 T 15-10-2018 IPR018392 LysM domain AM378_23155 4b3e07699661adc183c0e65b5173b34b 338 Gene3D G3DSA:2.70.70.10 187 338 3.1E-39 T 15-10-2018 IPR011055 Duplicated hybrid motif AM378_23155 4b3e07699661adc183c0e65b5173b34b 338 Pfam PF01551 Peptidase family M23 238 331 5.6E-32 T 15-10-2018 IPR016047 Peptidase M23 AM378_23155 4b3e07699661adc183c0e65b5173b34b 338 SUPERFAMILY SSF51261 83 335 2.3E-51 T 15-10-2018 IPR011055 Duplicated hybrid motif AM378_23155 4b3e07699661adc183c0e65b5173b34b 338 Pfam PF01476 LysM domain 83 124 4.9E-10 T 15-10-2018 IPR018392 LysM domain AM378_23155 4b3e07699661adc183c0e65b5173b34b 338 Gene3D G3DSA:3.10.350.10 81 124 1.6E-10 T 15-10-2018 IPR036779 LysM domain superfamily AM378_19585 42a0699df58462cfaf75d438c92e999f 639 Gene3D G3DSA:3.40.50.2300 366 471 1.5E-36 T 15-10-2018 AM378_19585 42a0699df58462cfaf75d438c92e999f 639 TIGRFAM TIGR00851 mtlA: PTS system, mannitol-specific IIC component 9 348 2.8E-186 T 15-10-2018 IPR004718 Phosphotransferase system, mannitol-specific enzyme IIC GO:0008982|GO:0009401|GO:0016021 KEGG: 00051+2.7.1.197 AM378_19585 42a0699df58462cfaf75d438c92e999f 639 SUPERFAMILY SSF55804 496 634 4.58E-41 T 15-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 AM378_19585 42a0699df58462cfaf75d438c92e999f 639 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 496 633 6.4E-33 T 15-10-2018 IPR002178 PTS EIIA type-2 domain AM378_19585 42a0699df58462cfaf75d438c92e999f 639 Gene3D G3DSA:3.40.930.10 490 637 6.7E-54 T 15-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 AM378_19585 42a0699df58462cfaf75d438c92e999f 639 Pfam PF02378 Phosphotransferase system, EIIC 18 278 4.2E-19 T 15-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 AM378_19585 42a0699df58462cfaf75d438c92e999f 639 SUPERFAMILY SSF52794 377 466 5.18E-23 T 15-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 AM378_19585 42a0699df58462cfaf75d438c92e999f 639 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 539 555 - T 15-10-2018 IPR002178 PTS EIIA type-2 domain AM378_19585 42a0699df58462cfaf75d438c92e999f 639 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 379 456 3.7E-10 T 15-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 AM378_17435 7339761a27671444651417b9135436bb 443 TIGRFAM TIGR00967 3a0501s007: preprotein translocase, SecY subunit 20 429 9.9E-141 T 15-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 AM378_17435 7339761a27671444651417b9135436bb 443 PIRSF PIRSF004557 11 441 1.9E-123 T 15-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 AM378_17435 7339761a27671444651417b9135436bb 443 ProSitePatterns PS00756 Protein secY signature 2. 173 190 - T 15-10-2018 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 AM378_17435 7339761a27671444651417b9135436bb 443 Pfam PF00344 SecY translocase 76 417 1.1E-119 T 15-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 AM378_17435 7339761a27671444651417b9135436bb 443 Hamap MF_01465 Protein translocase subunit SecY [secY]. 10 433 29.938 T 15-10-2018 IPR026593 Protein translocase subunit SecY AM378_17435 7339761a27671444651417b9135436bb 443 ProSitePatterns PS00755 Protein secY signature 1. 76 95 - T 15-10-2018 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 AM378_17435 7339761a27671444651417b9135436bb 443 Gene3D G3DSA:1.10.3370.10 13 429 2.1E-164 T 15-10-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 AM378_17435 7339761a27671444651417b9135436bb 443 SUPERFAMILY SSF103491 16 424 1.02E-133 T 15-10-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 AM378_17435 7339761a27671444651417b9135436bb 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 370 388 1.7E-98 T 15-10-2018 AM378_17435 7339761a27671444651417b9135436bb 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 315 337 1.7E-98 T 15-10-2018 AM378_17435 7339761a27671444651417b9135436bb 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 402 420 1.7E-98 T 15-10-2018 AM378_17435 7339761a27671444651417b9135436bb 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 154 179 1.7E-98 T 15-10-2018 AM378_17435 7339761a27671444651417b9135436bb 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 75 95 1.7E-98 T 15-10-2018 AM378_17435 7339761a27671444651417b9135436bb 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 116 139 1.7E-98 T 15-10-2018 AM378_17435 7339761a27671444651417b9135436bb 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 23 41 1.7E-98 T 15-10-2018 AM378_17435 7339761a27671444651417b9135436bb 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 180 203 1.7E-98 T 15-10-2018 AM378_17435 7339761a27671444651417b9135436bb 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 272 291 1.7E-98 T 15-10-2018 AM378_23830 d216148e31055e5e6aa374abc346d616 533 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 74 447 1.3E-95 T 15-10-2018 IPR000914 Solute-binding protein family 5 domain AM378_23830 d216148e31055e5e6aa374abc346d616 533 SUPERFAMILY SSF53850 30 524 7.24E-146 T 15-10-2018 AM378_23830 d216148e31055e5e6aa374abc346d616 533 Gene3D G3DSA:3.40.190.10 211 521 1.6E-169 T 15-10-2018 AM378_23830 d216148e31055e5e6aa374abc346d616 533 Gene3D G3DSA:3.90.76.10 55 210 1.6E-169 T 15-10-2018 AM378_23830 d216148e31055e5e6aa374abc346d616 533 Gene3D G3DSA:3.10.105.10 292 509 1.6E-169 T 15-10-2018 AM378_23830 d216148e31055e5e6aa374abc346d616 533 PIRSF PIRSF002741 14 532 5.6E-108 T 15-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 AM378_14690 06f16757fcc761204b9e4a9d76cf848e 173 Pfam PF00419 Fimbrial protein 28 173 2.4E-14 T 15-10-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM378_14690 06f16757fcc761204b9e4a9d76cf848e 173 SUPERFAMILY SSF49401 27 173 4.47E-32 T 15-10-2018 IPR008966 Adhesion domain superfamily AM378_14690 06f16757fcc761204b9e4a9d76cf848e 173 Gene3D G3DSA:2.60.40.1090 23 173 2.3E-38 T 15-10-2018 IPR036937 Fimbrial-type adhesion domain superfamily GO:0007155|GO:0009289 AM378_20655 da917cf4cb3ffc2571a5c921a02bd56e 259 Pfam PF08667 BetR domain 9 67 2.5E-9 T 15-10-2018 IPR013975 Transcription regulator BetR, N-terminal AM378_20655 da917cf4cb3ffc2571a5c921a02bd56e 259 Pfam PF00072 Response regulator receiver domain 139 221 2.2E-5 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM378_20655 da917cf4cb3ffc2571a5c921a02bd56e 259 SUPERFAMILY SSF52172 135 223 1.93E-8 T 15-10-2018 IPR011006 CheY-like superfamily AM378_20655 da917cf4cb3ffc2571a5c921a02bd56e 259 Gene3D G3DSA:3.40.50.2300 127 256 4.8E-11 T 15-10-2018 AM378_00380 6397630d1bf4efe8fc19867f827c13df 903 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 592 598 - T 15-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 AM378_00380 6397630d1bf4efe8fc19867f827c13df 903 PRINTS PR00943 Copper-transporting ATPase signature 573 588 2.4E-8 T 15-10-2018 AM378_00380 6397630d1bf4efe8fc19867f827c13df 903 PRINTS PR00943 Copper-transporting ATPase signature 764 781 2.4E-8 T 15-10-2018 AM378_00380 6397630d1bf4efe8fc19867f827c13df 903 PRINTS PR00943 Copper-transporting ATPase signature 860 874 2.4E-8 T 15-10-2018 AM378_00380 6397630d1bf4efe8fc19867f827c13df 903 PRINTS PR00943 Copper-transporting ATPase signature 306 325 2.4E-8 T 15-10-2018 AM378_00380 6397630d1bf4efe8fc19867f827c13df 903 PRINTS PR00943 Copper-transporting ATPase signature 511 525 2.4E-8 T 15-10-2018 AM378_00380 6397630d1bf4efe8fc19867f827c13df 903 PRINTS PR00943 Copper-transporting ATPase signature 378 396 2.4E-8 T 15-10-2018 AM378_00380 6397630d1bf4efe8fc19867f827c13df 903 SUPERFAMILY SSF81653 391 488 4.58E-24 T 15-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 AM378_00380 6397630d1bf4efe8fc19867f827c13df 903 Gene3D G3DSA:2.70.150.20 376 492 1.2E-33 T 15-10-2018 AM378_00380 6397630d1bf4efe8fc19867f827c13df 903 SUPERFAMILY SSF56784 588 893 7.33E-61 T 15-10-2018 IPR036412 HAD-like superfamily AM378_00380 6397630d1bf4efe8fc19867f827c13df 903 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 590 604 4.6E-25 T 15-10-2018 AM378_00380 6397630d1bf4efe8fc19867f827c13df 903 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 712 723 4.6E-25 T 15-10-2018 AM378_00380 6397630d1bf4efe8fc19867f827c13df 903 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 734 744 4.6E-25 T 15-10-2018 AM378_00380 6397630d1bf4efe8fc19867f827c13df 903 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 787 806 4.6E-25 T 15-10-2018 AM378_00380 6397630d1bf4efe8fc19867f827c13df 903 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 810 822 4.6E-25 T 15-10-2018 AM378_00380 6397630d1bf4efe8fc19867f827c13df 903 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 438 452 4.6E-25 T 15-10-2018 AM378_00380 6397630d1bf4efe8fc19867f827c13df 903 Pfam PF00702 haloacid dehalogenase-like hydrolase 587 801 2.8E-50 T 15-10-2018 AM378_00380 6397630d1bf4efe8fc19867f827c13df 903 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 302 896 1.6E-188 T 15-10-2018 AM378_00380 6397630d1bf4efe8fc19867f827c13df 903 Pfam PF00403 Heavy-metal-associated domain 73 128 5.3E-8 T 15-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 AM378_00380 6397630d1bf4efe8fc19867f827c13df 903 Pfam PF00403 Heavy-metal-associated domain 174 228 7.8E-16 T 15-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 AM378_00380 6397630d1bf4efe8fc19867f827c13df 903 Pfam PF00403 Heavy-metal-associated domain 9 61 3.7E-8 T 15-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 AM378_00380 6397630d1bf4efe8fc19867f827c13df 903 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 321 896 1.8E-183 T 15-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 AM378_00380 6397630d1bf4efe8fc19867f827c13df 903 ProSitePatterns PS01229 Hypothetical cof family signature 2. 787 809 - T 15-10-2018 AM378_00380 6397630d1bf4efe8fc19867f827c13df 903 Pfam PF00122 E1-E2 ATPase 389 569 1.0E-49 T 15-10-2018 AM378_00380 6397630d1bf4efe8fc19867f827c13df 903 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 360 864 2.2E-86 T 15-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 AM378_00380 6397630d1bf4efe8fc19867f827c13df 903 SUPERFAMILY SSF55008 170 235 2.62E-19 T 15-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 AM378_00380 6397630d1bf4efe8fc19867f827c13df 903 Gene3D G3DSA:3.40.1110.10 601 719 5.4E-93 T 15-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 AM378_00380 6397630d1bf4efe8fc19867f827c13df 903 SUPERFAMILY SSF55008 3 65 1.15E-10 T 15-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 AM378_00380 6397630d1bf4efe8fc19867f827c13df 903 ProSitePatterns PS01047 Heavy-metal-associated domain. 9 38 - T 15-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 AM378_00380 6397630d1bf4efe8fc19867f827c13df 903 Gene3D G3DSA:3.40.50.1000 571 839 5.4E-93 T 15-10-2018 IPR023214 HAD superfamily AM378_00380 6397630d1bf4efe8fc19867f827c13df 903 SUPERFAMILY SSF81665 355 848 5.23E-10 T 15-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 AM378_00380 6397630d1bf4efe8fc19867f827c13df 903 SUPERFAMILY SSF55008 71 129 7.59E-12 T 15-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 AM378_00380 6397630d1bf4efe8fc19867f827c13df 903 Gene3D G3DSA:3.30.70.100 170 233 2.9E-21 T 15-10-2018 AM378_00380 6397630d1bf4efe8fc19867f827c13df 903 Gene3D G3DSA:3.30.70.100 71 132 6.5E-14 T 15-10-2018 AM378_00380 6397630d1bf4efe8fc19867f827c13df 903 ProSitePatterns PS01047 Heavy-metal-associated domain. 174 203 - T 15-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 AM378_00380 6397630d1bf4efe8fc19867f827c13df 903 Gene3D G3DSA:3.30.70.100 6 66 2.0E-11 T 15-10-2018 AM378_24360 660fa677fdd745ba5fab73db772acb9c 207 TIGRFAM TIGR00493 clpP: ATP-dependent Clp endopeptidase, proteolytic subunit ClpP 14 205 5.9E-111 T 15-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AM378_24360 660fa677fdd745ba5fab73db772acb9c 207 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 16 206 45.064 T 15-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AM378_24360 660fa677fdd745ba5fab73db772acb9c 207 Gene3D G3DSA:3.90.226.10 6 207 3.0E-86 T 15-10-2018 AM378_24360 660fa677fdd745ba5fab73db772acb9c 207 PRINTS PR00127 Clp protease catalytic subunit P signature 103 120 5.4E-54 T 15-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AM378_24360 660fa677fdd745ba5fab73db772acb9c 207 PRINTS PR00127 Clp protease catalytic subunit P signature 124 143 5.4E-54 T 15-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AM378_24360 660fa677fdd745ba5fab73db772acb9c 207 PRINTS PR00127 Clp protease catalytic subunit P signature 72 92 5.4E-54 T 15-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AM378_24360 660fa677fdd745ba5fab73db772acb9c 207 PRINTS PR00127 Clp protease catalytic subunit P signature 32 47 5.4E-54 T 15-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AM378_24360 660fa677fdd745ba5fab73db772acb9c 207 PRINTS PR00127 Clp protease catalytic subunit P signature 181 200 5.4E-54 T 15-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AM378_24360 660fa677fdd745ba5fab73db772acb9c 207 Pfam PF00574 Clp protease 25 205 2.5E-91 T 15-10-2018 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA AM378_24360 660fa677fdd745ba5fab73db772acb9c 207 ProSitePatterns PS00381 Endopeptidase Clp serine active site. 103 114 - T 15-10-2018 IPR018215 ClpP, Ser active site AM378_24360 660fa677fdd745ba5fab73db772acb9c 207 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 125 138 - T 15-10-2018 IPR033135 ClpP, histidine active site AM378_24360 660fa677fdd745ba5fab73db772acb9c 207 SUPERFAMILY SSF52096 23 206 4.14E-77 T 15-10-2018 IPR029045 ClpP/crotonase-like domain superfamily AM378_22685 8aa8a2e1b025962cbeafdb8ec347213a 258 Pfam PF09335 SNARE associated Golgi protein 36 159 1.5E-18 T 15-10-2018 IPR032816 SNARE associated Golgi protein AM378_07330 00763552e6fcb19085312699da1e7b8e 82 SUPERFAMILY SSF69047 4 58 1.24E-5 T 15-10-2018 IPR036629 YjbJ superfamily AM378_07330 00763552e6fcb19085312699da1e7b8e 82 Pfam PF05957 Bacterial protein of unknown function (DUF883) 4 82 1.7E-11 T 15-10-2018 IPR010279 Inner membrane protein YqjD/ElaB GO:0043022 AM378_10050 004000dfb34848890c4042e1fb0ba387 190 PIRSF PIRSF028065 78 181 2.4E-10 T 15-10-2018 IPR016865 Inner membrane protein RclC AM378_10050 004000dfb34848890c4042e1fb0ba387 190 PIRSF PIRSF028065 7 65 2.4E-12 T 15-10-2018 IPR016865 Inner membrane protein RclC AM378_10050 004000dfb34848890c4042e1fb0ba387 190 Pfam PF04224 Protein of unknown function, DUF417 4 179 4.3E-72 T 15-10-2018 IPR007339 Inner membrane protein RclC-like AM378_08520 9a8dd2714c3a63b85c86020b5d9aaf32 105 SUPERFAMILY SSF54909 1 83 8.26E-12 T 15-10-2018 IPR011008 Dimeric alpha-beta barrel AM378_08520 9a8dd2714c3a63b85c86020b5d9aaf32 105 Gene3D G3DSA:3.30.70.100 2 97 1.1E-9 T 15-10-2018 AM378_08520 9a8dd2714c3a63b85c86020b5d9aaf32 105 Pfam PF03992 Antibiotic biosynthesis monooxygenase 1 63 4.1E-8 T 15-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain AM378_15815 b0ca4f82d4f125ad2b12e9d099a908eb 469 Pfam PF11471 Maltoporin periplasmic N-terminal extension 3 54 1.1E-16 T 15-10-2018 IPR021570 LamB-type porin N-terminal domain AM378_15815 b0ca4f82d4f125ad2b12e9d099a908eb 469 Gene3D G3DSA:1.20.5.340 25 93 1.3E-5 T 15-10-2018 AM378_15815 b0ca4f82d4f125ad2b12e9d099a908eb 469 SUPERFAMILY SSF57997 27 81 9.81E-7 T 15-10-2018 AM378_15815 b0ca4f82d4f125ad2b12e9d099a908eb 469 Pfam PF16966 Porin-like glycoporin RafY 104 469 1.7E-186 T 15-10-2018 IPR016963 Glycoporin RafY AM378_05825 ee3fa21d989c36a2349c8f660ae3e145 367 SUPERFAMILY SSF51395 1 365 4.97E-126 T 15-10-2018 AM378_05825 ee3fa21d989c36a2349c8f660ae3e145 367 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 5 344 2.2E-91 T 15-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 AM378_05825 ee3fa21d989c36a2349c8f660ae3e145 367 Gene3D G3DSA:3.20.20.70 3 367 8.9E-143 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM378_06880 1c521c8ce74858dbc08d92e2899e32e6 460 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 262 299 - T 15-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AM378_06880 1c521c8ce74858dbc08d92e2899e32e6 460 PIRSF PIRSF000521 140 455 7.4E-36 T 15-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AM378_06880 1c521c8ce74858dbc08d92e2899e32e6 460 PIRSF PIRSF000521 2 148 1.3E-7 T 15-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AM378_06880 1c521c8ce74858dbc08d92e2899e32e6 460 Pfam PF00202 Aminotransferase class-III 39 452 1.5E-100 T 15-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AM378_06880 1c521c8ce74858dbc08d92e2899e32e6 460 Gene3D G3DSA:3.90.1150.10 23 449 1.5E-136 T 15-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AM378_06880 1c521c8ce74858dbc08d92e2899e32e6 460 SUPERFAMILY SSF53383 30 452 1.3E-123 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM378_06880 1c521c8ce74858dbc08d92e2899e32e6 460 TIGRFAM TIGR00709 dat: 2,4-diaminobutyrate 4-transaminase 21 454 3.0E-214 T 15-10-2018 IPR004637 2,4-diaminobutyrate 4-transaminase GO:0008483|GO:0009058 KEGG: 00260+2.6.1.76|MetaCyc: PWY-6409|MetaCyc: PWY-6562|MetaCyc: PWY-761|MetaCyc: PWY-7855|MetaCyc: PWY-7988 AM378_06880 1c521c8ce74858dbc08d92e2899e32e6 460 Gene3D G3DSA:3.40.640.10 76 343 1.5E-136 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AM378_07160 fa656ddd81dc3afafdc3058e2aaea456 184 Pfam PF01381 Helix-turn-helix 14 66 4.0E-16 T 15-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM378_07160 fa656ddd81dc3afafdc3058e2aaea456 184 SMART SM00530 13 68 9.8E-15 T 15-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM378_07160 fa656ddd81dc3afafdc3058e2aaea456 184 SUPERFAMILY SSF47413 10 71 2.95E-16 T 15-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AM378_07160 fa656ddd81dc3afafdc3058e2aaea456 184 Gene3D G3DSA:1.10.260.40 9 80 1.1E-17 T 15-10-2018 AM378_07160 fa656ddd81dc3afafdc3058e2aaea456 184 SUPERFAMILY SSF51182 61 181 1.18E-20 T 15-10-2018 IPR011051 RmlC-like cupin domain superfamily AM378_07160 fa656ddd81dc3afafdc3058e2aaea456 184 Gene3D G3DSA:2.60.120.10 96 184 6.9E-17 T 15-10-2018 IPR014710 RmlC-like jelly roll fold AM378_01630 dc76b363801469b13e0222e2484b0c48 765 Gene3D G3DSA:3.40.50.1700 381 650 1.1E-98 T 15-10-2018 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily GO:0004553|GO:0005975 AM378_01630 dc76b363801469b13e0222e2484b0c48 765 Gene3D G3DSA:2.60.40.10 651 764 1.1E-35 T 15-10-2018 IPR013783 Immunoglobulin-like fold AM378_01630 dc76b363801469b13e0222e2484b0c48 765 Pfam PF14310 Fibronectin type III-like domain 686 754 2.5E-21 T 15-10-2018 IPR026891 Fibronectin type III-like domain AM378_01630 dc76b363801469b13e0222e2484b0c48 765 Gene3D G3DSA:3.20.20.300 28 368 2.1E-118 T 15-10-2018 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily GO:0004553|GO:0005975 AM378_01630 dc76b363801469b13e0222e2484b0c48 765 SUPERFAMILY SSF52279 395 651 8.24E-62 T 15-10-2018 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily GO:0004553|GO:0005975 AM378_01630 dc76b363801469b13e0222e2484b0c48 765 SMART SM01217 685 754 1.3E-29 T 15-10-2018 IPR026891 Fibronectin type III-like domain AM378_01630 dc76b363801469b13e0222e2484b0c48 765 PRINTS PR00133 Glycosyl hydrolase family 3 signature 120 139 2.3E-19 T 15-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 AM378_01630 dc76b363801469b13e0222e2484b0c48 765 PRINTS PR00133 Glycosyl hydrolase family 3 signature 273 291 2.3E-19 T 15-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 AM378_01630 dc76b363801469b13e0222e2484b0c48 765 PRINTS PR00133 Glycosyl hydrolase family 3 signature 203 219 2.3E-19 T 15-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 AM378_01630 dc76b363801469b13e0222e2484b0c48 765 PRINTS PR00133 Glycosyl hydrolase family 3 signature 166 182 2.3E-19 T 15-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 AM378_01630 dc76b363801469b13e0222e2484b0c48 765 PRINTS PR00133 Glycosyl hydrolase family 3 signature 101 117 2.3E-19 T 15-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 AM378_01630 dc76b363801469b13e0222e2484b0c48 765 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 46 351 4.5E-88 T 15-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 AM378_01630 dc76b363801469b13e0222e2484b0c48 765 ProSitePatterns PS00775 Glycosyl hydrolases family 3 active site. 273 290 - T 15-10-2018 IPR019800 Glycoside hydrolase, family 3, active site GO:0004553|GO:0005975 AM378_01630 dc76b363801469b13e0222e2484b0c48 765 SUPERFAMILY SSF51445 34 388 2.21E-98 T 15-10-2018 IPR017853 Glycoside hydrolase superfamily AM378_01630 dc76b363801469b13e0222e2484b0c48 765 Pfam PF01915 Glycosyl hydrolase family 3 C-terminal domain 395 648 1.5E-63 T 15-10-2018 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 AM378_12595 c85f3d57c8979bbb8e6f0e68e87a8076 575 Gene3D G3DSA:3.50.30.10 4 233 9.9E-82 T 15-10-2018 AM378_12595 c85f3d57c8979bbb8e6f0e68e87a8076 575 Pfam PF00391 PEP-utilising enzyme, mobile domain 152 222 2.2E-22 T 15-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 AM378_12595 c85f3d57c8979bbb8e6f0e68e87a8076 575 Pfam PF05524 PEP-utilising enzyme, N-terminal 4 126 2.7E-29 T 15-10-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 AM378_12595 c85f3d57c8979bbb8e6f0e68e87a8076 575 Gene3D G3DSA:3.20.20.60 234 575 1.1E-128 T 15-10-2018 AM378_12595 c85f3d57c8979bbb8e6f0e68e87a8076 575 SUPERFAMILY SSF51621 252 549 6.54E-111 T 15-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 AM378_12595 c85f3d57c8979bbb8e6f0e68e87a8076 575 PIRSF PIRSF000732 1 574 1.5E-219 T 15-10-2018 IPR024692 Phosphotransferase system, enzyme I GO:0008965|GO:0009401 AM378_12595 c85f3d57c8979bbb8e6f0e68e87a8076 575 Gene3D G3DSA:1.10.274.10 21 146 9.9E-82 T 15-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 AM378_12595 c85f3d57c8979bbb8e6f0e68e87a8076 575 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 500 512 4.5E-31 T 15-10-2018 AM378_12595 c85f3d57c8979bbb8e6f0e68e87a8076 575 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 464 479 4.5E-31 T 15-10-2018 AM378_12595 c85f3d57c8979bbb8e6f0e68e87a8076 575 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 293 312 4.5E-31 T 15-10-2018 AM378_12595 c85f3d57c8979bbb8e6f0e68e87a8076 575 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 447 462 4.5E-31 T 15-10-2018 AM378_12595 c85f3d57c8979bbb8e6f0e68e87a8076 575 SUPERFAMILY SSF47831 24 143 3.79E-33 T 15-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 AM378_12595 c85f3d57c8979bbb8e6f0e68e87a8076 575 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 252 541 3.3E-126 T 15-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 AM378_12595 c85f3d57c8979bbb8e6f0e68e87a8076 575 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 184 195 - T 15-10-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 AM378_12595 c85f3d57c8979bbb8e6f0e68e87a8076 575 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 447 465 - T 15-10-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 AM378_12595 c85f3d57c8979bbb8e6f0e68e87a8076 575 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 2 566 1.9E-260 T 15-10-2018 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 AM378_12595 c85f3d57c8979bbb8e6f0e68e87a8076 575 SUPERFAMILY SSF52009 125 246 3.53E-36 T 15-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 AM378_15600 98d8908cdb3076f232a3d2205923bf7a 96 SMART SM01152 7 83 2.3E-38 T 15-10-2018 IPR003746 Protein of unknown function DUF167 AM378_15600 98d8908cdb3076f232a3d2205923bf7a 96 Hamap MF_00634 UPF0235 protein YggU [yggU]. 7 93 20.455 T 15-10-2018 IPR003746 Protein of unknown function DUF167 AM378_15600 98d8908cdb3076f232a3d2205923bf7a 96 Pfam PF02594 Uncharacterised ACR, YggU family COG1872 11 81 1.3E-26 T 15-10-2018 IPR003746 Protein of unknown function DUF167 AM378_15600 98d8908cdb3076f232a3d2205923bf7a 96 SUPERFAMILY SSF69786 9 95 7.06E-32 T 15-10-2018 IPR036591 YggU-like superfamily AM378_15600 98d8908cdb3076f232a3d2205923bf7a 96 Gene3D G3DSA:3.30.1200.10 1 96 9.6E-36 T 15-10-2018 IPR036591 YggU-like superfamily AM378_15600 98d8908cdb3076f232a3d2205923bf7a 96 TIGRFAM TIGR00251 TIGR00251: TIGR00251 family protein 6 88 5.9E-29 T 15-10-2018 IPR005228 Conserved hypothetical protein CHP00251 AM378_23695 ab5a9d08ded6391fa19807f71266990b 184 SMART SM00479 7 182 1.2E-7 T 15-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III AM378_23695 ab5a9d08ded6391fa19807f71266990b 184 SUPERFAMILY SSF53098 6 182 2.48E-34 T 15-10-2018 IPR012337 Ribonuclease H-like superfamily AM378_23695 ab5a9d08ded6391fa19807f71266990b 184 Gene3D G3DSA:3.30.420.10 2 183 1.4E-32 T 15-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AM378_23695 ab5a9d08ded6391fa19807f71266990b 184 Pfam PF16473 3' exoribonuclease, RNase T-like 9 175 5.7E-11 T 15-10-2018 IPR033390 3'-5' exoribonuclease Rv2179c-like domain AM378_09225 e3a90c85679fe4e4abf587645901c9f8 223 Pfam PF00005 ABC transporter 24 171 3.2E-29 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM378_09225 e3a90c85679fe4e4abf587645901c9f8 223 SMART SM00382 32 220 3.3E-13 T 15-10-2018 IPR003593 AAA+ ATPase domain AM378_09225 e3a90c85679fe4e4abf587645901c9f8 223 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM378_09225 e3a90c85679fe4e4abf587645901c9f8 223 Gene3D G3DSA:3.40.50.300 1 223 1.0E-68 T 15-10-2018 AM378_09225 e3a90c85679fe4e4abf587645901c9f8 223 SUPERFAMILY SSF52540 3 222 2.11E-57 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_22530 771733107c550f1ceb75c6a6a8fde07c 87 TIGRFAM TIGR00029 S20: ribosomal protein bS20 1 86 2.8E-31 T 15-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM378_22530 771733107c550f1ceb75c6a6a8fde07c 87 ProDom PD004231 RIBOSOMAL S20 30S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN S20P SUBUNIT CHLOROPLAST DIRECT 13 87 3.0E-24 T 15-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM378_22530 771733107c550f1ceb75c6a6a8fde07c 87 Pfam PF01649 Ribosomal protein S20 2 84 1.3E-28 T 15-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM378_22530 771733107c550f1ceb75c6a6a8fde07c 87 Gene3D G3DSA:1.20.58.110 1 87 8.9E-31 T 15-10-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM378_22530 771733107c550f1ceb75c6a6a8fde07c 87 SUPERFAMILY SSF46992 3 86 2.22E-31 T 15-10-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM378_22530 771733107c550f1ceb75c6a6a8fde07c 87 Hamap MF_00500 30S ribosomal protein S20 [rpsT]. 1 85 17.714 T 15-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM378_00485 b17ee18aea9c19c70eb7fc4606cf5122 284 Gene3D G3DSA:3.40.30.10 1 111 2.7E-29 T 15-10-2018 AM378_00485 b17ee18aea9c19c70eb7fc4606cf5122 284 Gene3D G3DSA:1.25.40.10 112 196 7.9E-26 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AM378_00485 b17ee18aea9c19c70eb7fc4606cf5122 284 Pfam PF14559 Tetratricopeptide repeat 124 190 2.7E-18 T 15-10-2018 AM378_00485 b17ee18aea9c19c70eb7fc4606cf5122 284 Pfam PF14561 Tetratricopeptide repeat 195 284 3.1E-30 T 15-10-2018 AM378_00485 b17ee18aea9c19c70eb7fc4606cf5122 284 Gene3D G3DSA:1.25.40.10 197 284 4.3E-26 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AM378_00485 b17ee18aea9c19c70eb7fc4606cf5122 284 Pfam PF00085 Thioredoxin 6 107 2.6E-19 T 15-10-2018 IPR013766 Thioredoxin domain GO:0045454 AM378_00485 b17ee18aea9c19c70eb7fc4606cf5122 284 SUPERFAMILY SSF48452 113 240 3.16E-6 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AM378_00485 b17ee18aea9c19c70eb7fc4606cf5122 284 SUPERFAMILY SSF52833 3 112 9.25E-31 T 15-10-2018 IPR036249 Thioredoxin-like superfamily AM378_03935 822cf449dc519d72043d8b0ea4812ebf 390 Gene3D G3DSA:1.20.1250.20 10 383 2.9E-45 T 15-10-2018 AM378_03935 822cf449dc519d72043d8b0ea4812ebf 390 Pfam PF07690 Major Facilitator Superfamily 17 319 1.5E-37 T 15-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM378_03935 822cf449dc519d72043d8b0ea4812ebf 390 PRINTS PR01035 Tetracycline resistance protein signature 141 163 3.0E-5 T 15-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AM378_03935 822cf449dc519d72043d8b0ea4812ebf 390 PRINTS PR01035 Tetracycline resistance protein signature 272 293 3.0E-5 T 15-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AM378_03935 822cf449dc519d72043d8b0ea4812ebf 390 PRINTS PR01035 Tetracycline resistance protein signature 48 67 3.0E-5 T 15-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AM378_03935 822cf449dc519d72043d8b0ea4812ebf 390 SUPERFAMILY SSF103473 9 384 1.96E-54 T 15-10-2018 IPR036259 MFS transporter superfamily AM378_00295 308b3426f8fd327b0c8e6fc7c9654bb1 387 TIGRFAM TIGR00045 TIGR00045: glycerate kinase 6 379 1.1E-162 T 15-10-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 AM378_00295 308b3426f8fd327b0c8e6fc7c9654bb1 387 Gene3D G3DSA:3.40.50.10350 6 366 1.9E-142 T 15-10-2018 IPR018197 Glycerate kinase, restriction-enzyme-like fold AM378_00295 308b3426f8fd327b0c8e6fc7c9654bb1 387 PIRSF PIRSF006078 5 381 8.2E-140 T 15-10-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 AM378_00295 308b3426f8fd327b0c8e6fc7c9654bb1 387 SUPERFAMILY SSF110738 6 379 2.75E-143 T 15-10-2018 IPR036129 Glycerate kinase superfamily GO:0008887|GO:0031388 AM378_00295 308b3426f8fd327b0c8e6fc7c9654bb1 387 Gene3D G3DSA:3.90.1510.10 46 280 1.9E-142 T 15-10-2018 IPR018193 Glycerate kinase, flavodoxin-like fold GO:0008887|GO:0031388 AM378_00295 308b3426f8fd327b0c8e6fc7c9654bb1 387 Pfam PF02595 Glycerate kinase family 7 377 2.2E-153 T 15-10-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 AM378_10910 de5a28b20ba970f9589278ca9ddfb2cd 456 Gene3D G3DSA:1.20.1250.20 262 451 3.8E-19 T 15-10-2018 AM378_10910 de5a28b20ba970f9589278ca9ddfb2cd 456 Pfam PF07690 Major Facilitator Superfamily 20 408 5.5E-46 T 15-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM378_10910 de5a28b20ba970f9589278ca9ddfb2cd 456 SUPERFAMILY SSF103473 12 443 2.22E-57 T 15-10-2018 IPR036259 MFS transporter superfamily AM378_10910 de5a28b20ba970f9589278ca9ddfb2cd 456 PRINTS PR01036 Tetracycline resistance protein TetB signature 203 221 2.2E-7 T 15-10-2018 AM378_10910 de5a28b20ba970f9589278ca9ddfb2cd 456 PRINTS PR01036 Tetracycline resistance protein TetB signature 139 163 2.2E-7 T 15-10-2018 AM378_10910 de5a28b20ba970f9589278ca9ddfb2cd 456 PRINTS PR01036 Tetracycline resistance protein TetB signature 18 42 2.2E-7 T 15-10-2018 AM378_10910 de5a28b20ba970f9589278ca9ddfb2cd 456 PRINTS PR01036 Tetracycline resistance protein TetB signature 109 129 2.2E-7 T 15-10-2018 AM378_10910 de5a28b20ba970f9589278ca9ddfb2cd 456 Gene3D G3DSA:1.20.1720.10 16 249 3.8E-38 T 15-10-2018 AM378_01210 81b7a6aeb9c5289f7c4e114fb8141ccf 383 SUPERFAMILY SSF55060 205 381 1.14E-53 T 15-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily AM378_01210 81b7a6aeb9c5289f7c4e114fb8141ccf 383 Pfam PF08544 GHMP kinases C terminal 279 361 5.5E-12 T 15-10-2018 IPR013750 GHMP kinase, C-terminal domain AM378_01210 81b7a6aeb9c5289f7c4e114fb8141ccf 383 SUPERFAMILY SSF54211 8 203 1.52E-63 T 15-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AM378_01210 81b7a6aeb9c5289f7c4e114fb8141ccf 383 Hamap MF_00246 Galactokinase [galK]. 25 382 43.57 T 15-10-2018 IPR022963 Galactokinase, bacterial GO:0004335|GO:0006012 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 AM378_01210 81b7a6aeb9c5289f7c4e114fb8141ccf 383 PIRSF PIRSF000530 3 383 4.3E-123 T 15-10-2018 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 AM378_01210 81b7a6aeb9c5289f7c4e114fb8141ccf 383 Gene3D G3DSA:3.30.70.890 202 357 2.1E-133 T 15-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily AM378_01210 81b7a6aeb9c5289f7c4e114fb8141ccf 383 Gene3D G3DSA:3.30.230.10 23 201 2.1E-133 T 15-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AM378_01210 81b7a6aeb9c5289f7c4e114fb8141ccf 383 ProSitePatterns PS00627 GHMP kinases putative ATP-binding domain. 121 132 - T 15-10-2018 IPR006203 GHMP kinase, ATP-binding, conserved site GO:0005524 AM378_01210 81b7a6aeb9c5289f7c4e114fb8141ccf 383 Pfam PF00288 GHMP kinases N terminal domain 114 181 4.1E-15 T 15-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 AM378_01210 81b7a6aeb9c5289f7c4e114fb8141ccf 383 ProSitePatterns PS00106 Galactokinase signature. 27 38 - T 15-10-2018 IPR019741 Galactokinase, conserved site KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 AM378_01210 81b7a6aeb9c5289f7c4e114fb8141ccf 383 TIGRFAM TIGR00131 gal_kin: galactokinase 7 383 4.8E-156 T 15-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 AM378_01210 81b7a6aeb9c5289f7c4e114fb8141ccf 383 PRINTS PR00473 Galactokinase signature 92 103 1.6E-29 T 15-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 AM378_01210 81b7a6aeb9c5289f7c4e114fb8141ccf 383 PRINTS PR00473 Galactokinase signature 263 277 1.6E-29 T 15-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 AM378_01210 81b7a6aeb9c5289f7c4e114fb8141ccf 383 PRINTS PR00473 Galactokinase signature 27 45 1.6E-29 T 15-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 AM378_01210 81b7a6aeb9c5289f7c4e114fb8141ccf 383 PRINTS PR00473 Galactokinase signature 112 130 1.6E-29 T 15-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 AM378_01210 81b7a6aeb9c5289f7c4e114fb8141ccf 383 PRINTS PR00959 Mevalonate kinase family signature 25 49 2.1E-46 T 15-10-2018 AM378_01210 81b7a6aeb9c5289f7c4e114fb8141ccf 383 PRINTS PR00959 Mevalonate kinase family signature 328 345 2.1E-46 T 15-10-2018 AM378_01210 81b7a6aeb9c5289f7c4e114fb8141ccf 383 PRINTS PR00959 Mevalonate kinase family signature 162 181 2.1E-46 T 15-10-2018 AM378_01210 81b7a6aeb9c5289f7c4e114fb8141ccf 383 PRINTS PR00959 Mevalonate kinase family signature 119 141 2.1E-46 T 15-10-2018 AM378_01210 81b7a6aeb9c5289f7c4e114fb8141ccf 383 Pfam PF10509 Galactokinase galactose-binding signature 10 58 5.3E-23 T 15-10-2018 IPR019539 Galactokinase galactose-binding domain GO:0005534 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 AM378_22865 ec632d565397fedfa0a2a1c46df80c98 384 SUPERFAMILY SSF55307 203 319 2.98E-42 T 15-10-2018 IPR008280 Tubulin/FtsZ, C-terminal Reactome: R-HSA-380320 AM378_22865 ec632d565397fedfa0a2a1c46df80c98 384 SMART SM00865 206 324 8.3E-56 T 15-10-2018 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain Reactome: R-HSA-380320 AM378_22865 ec632d565397fedfa0a2a1c46df80c98 384 Hamap MF_00909 Cell division protein FtsZ [ftsZ]. 8 344 38.017 T 15-10-2018 IPR000158 Cell division protein FtsZ GO:0005525 AM378_22865 ec632d565397fedfa0a2a1c46df80c98 384 Gene3D G3DSA:3.40.50.1440 9 316 2.5E-116 T 15-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 AM378_22865 ec632d565397fedfa0a2a1c46df80c98 384 TIGRFAM TIGR00065 ftsZ: cell division protein FtsZ 7 336 1.9E-141 T 15-10-2018 IPR000158 Cell division protein FtsZ GO:0005525 AM378_22865 ec632d565397fedfa0a2a1c46df80c98 384 ProSitePatterns PS01134 FtsZ protein signature 1. 43 77 - T 15-10-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 AM378_22865 ec632d565397fedfa0a2a1c46df80c98 384 Pfam PF00091 Tubulin/FtsZ family, GTPase domain 13 172 2.0E-41 T 15-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 AM378_22865 ec632d565397fedfa0a2a1c46df80c98 384 Pfam PF12327 FtsZ family, C-terminal domain 221 315 5.7E-37 T 15-10-2018 IPR024757 Cell division protein FtsZ, C-terminal AM378_22865 ec632d565397fedfa0a2a1c46df80c98 384 SUPERFAMILY SSF52490 12 207 3.66E-69 T 15-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 AM378_22865 ec632d565397fedfa0a2a1c46df80c98 384 ProSitePatterns PS01135 FtsZ protein signature 2. 96 117 - T 15-10-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 AM378_22865 ec632d565397fedfa0a2a1c46df80c98 384 SMART SM00864 12 204 2.2E-111 T 15-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 AM378_22865 ec632d565397fedfa0a2a1c46df80c98 384 PRINTS PR00423 Cell division protein FtsZ signature 188 210 1.4E-51 T 15-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 AM378_22865 ec632d565397fedfa0a2a1c46df80c98 384 PRINTS PR00423 Cell division protein FtsZ signature 97 117 1.4E-51 T 15-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 AM378_22865 ec632d565397fedfa0a2a1c46df80c98 384 PRINTS PR00423 Cell division protein FtsZ signature 125 146 1.4E-51 T 15-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 AM378_22865 ec632d565397fedfa0a2a1c46df80c98 384 PRINTS PR00423 Cell division protein FtsZ signature 211 232 1.4E-51 T 15-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 AM378_11975 ce44903d7668546807878aae318c8993 336 PIRSF PIRSF000148 4 336 4.0E-98 T 15-10-2018 AM378_11975 ce44903d7668546807878aae318c8993 336 SMART SM00859 6 121 4.5E-33 T 15-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 AM378_11975 ce44903d7668546807878aae318c8993 336 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 141 316 1.2E-38 T 15-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 AM378_11975 ce44903d7668546807878aae318c8993 336 SUPERFAMILY SSF51735 5 158 1.45E-44 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily AM378_11975 ce44903d7668546807878aae318c8993 336 Gene3D G3DSA:3.40.50.720 7 328 3.1E-110 T 15-10-2018 AM378_11975 ce44903d7668546807878aae318c8993 336 Gene3D G3DSA:3.30.360.10 130 314 3.1E-110 T 15-10-2018 AM378_11975 ce44903d7668546807878aae318c8993 336 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 6 119 9.2E-25 T 15-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 AM378_11975 ce44903d7668546807878aae318c8993 336 SUPERFAMILY SSF55347 132 318 3.13E-53 T 15-10-2018 AM378_17135 dd2acc2d520bb63e9b499cc43ddd5dbc 333 Gene3D G3DSA:3.40.50.2300 167 295 2.7E-73 T 15-10-2018 AM378_17135 dd2acc2d520bb63e9b499cc43ddd5dbc 333 Gene3D G3DSA:1.10.260.40 1 62 3.7E-20 T 15-10-2018 AM378_17135 dd2acc2d520bb63e9b499cc43ddd5dbc 333 Pfam PF00356 Bacterial regulatory proteins, lacI family 13 56 7.4E-13 T 15-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM378_17135 dd2acc2d520bb63e9b499cc43ddd5dbc 333 Gene3D G3DSA:3.40.50.2300 63 310 2.7E-73 T 15-10-2018 AM378_17135 dd2acc2d520bb63e9b499cc43ddd5dbc 333 SUPERFAMILY SSF53822 69 332 7.43E-69 T 15-10-2018 IPR028082 Periplasmic binding protein-like I AM378_17135 dd2acc2d520bb63e9b499cc43ddd5dbc 333 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 68 274 9.5E-30 T 15-10-2018 IPR001761 Periplasmic binding protein/LacI sugar binding domain AM378_17135 dd2acc2d520bb63e9b499cc43ddd5dbc 333 SUPERFAMILY SSF47413 7 67 4.82E-14 T 15-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AM378_17135 dd2acc2d520bb63e9b499cc43ddd5dbc 333 SMART SM00354 8 79 3.3E-23 T 15-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM378_01390 ad8915f366085c6127d966368db5b1ae 578 Pfam PF00005 ABC transporter 27 166 9.2E-27 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM378_01390 ad8915f366085c6127d966368db5b1ae 578 SUPERFAMILY SSF52540 6 228 1.41E-53 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_01390 ad8915f366085c6127d966368db5b1ae 578 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM378_01390 ad8915f366085c6127d966368db5b1ae 578 SUPERFAMILY SSF52540 325 550 3.41E-62 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_01390 ad8915f366085c6127d966368db5b1ae 578 Pfam PF00005 ABC transporter 347 490 4.5E-27 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM378_01390 ad8915f366085c6127d966368db5b1ae 578 Gene3D G3DSA:3.40.50.300 322 558 1.4E-63 T 15-10-2018 AM378_01390 ad8915f366085c6127d966368db5b1ae 578 Gene3D G3DSA:3.40.50.300 1 238 3.2E-57 T 15-10-2018 AM378_01390 ad8915f366085c6127d966368db5b1ae 578 SMART SM00382 355 536 1.7E-15 T 15-10-2018 IPR003593 AAA+ ATPase domain AM378_01390 ad8915f366085c6127d966368db5b1ae 578 SMART SM00382 33 214 9.3E-10 T 15-10-2018 IPR003593 AAA+ ATPase domain AM378_03475 a7d67ee3b8f1a868a440341f28a42734 428 Gene3D G3DSA:3.65.10.10 242 421 7.8E-159 T 15-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 AM378_03475 a7d67ee3b8f1a868a440341f28a42734 428 Gene3D G3DSA:3.65.10.10 21 224 7.8E-159 T 15-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 AM378_03475 a7d67ee3b8f1a868a440341f28a42734 428 Hamap MF_00210 3-phosphoshikimate 1-carboxyvinyltransferase [aroA]. 11 427 35.538 T 15-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 AM378_03475 a7d67ee3b8f1a868a440341f28a42734 428 ProSitePatterns PS00104 EPSP synthase signature 1. 91 105 - T 15-10-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 AM378_03475 a7d67ee3b8f1a868a440341f28a42734 428 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 9 421 1.5E-151 T 15-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 AM378_03475 a7d67ee3b8f1a868a440341f28a42734 428 TIGRFAM TIGR01356 aroA: 3-phosphoshikimate 1-carboxyvinyltransferase 15 424 4.9E-143 T 15-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 AM378_03475 a7d67ee3b8f1a868a440341f28a42734 428 ProSitePatterns PS00885 EPSP synthase signature 2. 339 357 - T 15-10-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 AM378_03475 a7d67ee3b8f1a868a440341f28a42734 428 SUPERFAMILY SSF55205 4 424 1.83E-146 T 15-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 AM378_03475 a7d67ee3b8f1a868a440341f28a42734 428 PIRSF PIRSF000505 4 428 2.9E-156 T 15-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 AM378_21945 bd305540b63e5203929cf6228129612b 378 Pfam PF13609 Gram-negative porin 14 263 5.1E-17 T 15-10-2018 AM378_21945 bd305540b63e5203929cf6228129612b 378 Gene3D G3DSA:2.40.160.10 42 378 1.5E-34 T 15-10-2018 IPR023614 Porin domain superfamily AM378_21945 bd305540b63e5203929cf6228129612b 378 SUPERFAMILY SSF56935 41 366 1.98E-34 T 15-10-2018 AM378_14270 4c3e0dae43e515e9ccdf8d1c1a0068df 340 TIGRFAM TIGR01853 lipid_A_lpxD: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD 8 329 4.0E-124 T 15-10-2018 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 AM378_14270 4c3e0dae43e515e9ccdf8d1c1a0068df 340 Gene3D G3DSA:2.160.10.10 100 309 2.6E-68 T 15-10-2018 AM378_14270 4c3e0dae43e515e9ccdf8d1c1a0068df 340 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 222 255 2.6E-7 T 15-10-2018 IPR001451 Hexapeptide repeat AM378_14270 4c3e0dae43e515e9ccdf8d1c1a0068df 340 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 110 144 1.4E-9 T 15-10-2018 IPR001451 Hexapeptide repeat AM378_14270 4c3e0dae43e515e9ccdf8d1c1a0068df 340 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 145 179 1.6E-7 T 15-10-2018 IPR001451 Hexapeptide repeat AM378_14270 4c3e0dae43e515e9ccdf8d1c1a0068df 340 Hamap MF_00523 UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase [lpxD]. 9 326 35.956 T 15-10-2018 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 AM378_14270 4c3e0dae43e515e9ccdf8d1c1a0068df 340 Pfam PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD 22 89 5.4E-25 T 15-10-2018 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region GO:0009245|GO:0016747 AM378_14270 4c3e0dae43e515e9ccdf8d1c1a0068df 340 SUPERFAMILY SSF51161 33 316 5.63E-88 T 15-10-2018 IPR011004 Trimeric LpxA-like superfamily AM378_14270 4c3e0dae43e515e9ccdf8d1c1a0068df 340 Gene3D G3DSA:3.40.1390.10 1 99 1.1E-37 T 15-10-2018 AM378_14270 4c3e0dae43e515e9ccdf8d1c1a0068df 340 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 130 158 - T 15-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 AM378_14270 4c3e0dae43e515e9ccdf8d1c1a0068df 340 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 225 253 - T 15-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 AM378_17460 ba126741694d3eca6b4cbac1121a2cfc 177 PRINTS PR00059 Ribosomal protein L6 signature 71 96 2.4E-33 T 15-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 AM378_17460 ba126741694d3eca6b4cbac1121a2cfc 177 PRINTS PR00059 Ribosomal protein L6 signature 99 115 2.4E-33 T 15-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 AM378_17460 ba126741694d3eca6b4cbac1121a2cfc 177 PRINTS PR00059 Ribosomal protein L6 signature 141 162 2.4E-33 T 15-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 AM378_17460 ba126741694d3eca6b4cbac1121a2cfc 177 SUPERFAMILY SSF56053 1 82 1.22E-23 T 15-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM378_17460 ba126741694d3eca6b4cbac1121a2cfc 177 Pfam PF00347 Ribosomal protein L6 90 164 2.0E-18 T 15-10-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM378_17460 ba126741694d3eca6b4cbac1121a2cfc 177 Pfam PF00347 Ribosomal protein L6 11 82 3.7E-20 T 15-10-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM378_17460 ba126741694d3eca6b4cbac1121a2cfc 177 TIGRFAM TIGR03654 L6_bact: ribosomal protein uL6 2 176 1.4E-73 T 15-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 AM378_17460 ba126741694d3eca6b4cbac1121a2cfc 177 Gene3D G3DSA:3.90.930.12 1 82 2.2E-30 T 15-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM378_17460 ba126741694d3eca6b4cbac1121a2cfc 177 Hamap MF_01365_B 50S ribosomal protein L6 [rplF]. 1 176 36.551 T 15-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 AM378_17460 ba126741694d3eca6b4cbac1121a2cfc 177 SUPERFAMILY SSF56053 83 177 8.76E-36 T 15-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM378_17460 ba126741694d3eca6b4cbac1121a2cfc 177 PIRSF PIRSF002162 1 177 5.6E-45 T 15-10-2018 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM378_17460 ba126741694d3eca6b4cbac1121a2cfc 177 ProSitePatterns PS00525 Ribosomal protein L6 signature 1. 154 162 - T 15-10-2018 IPR002358 Ribosomal protein L6, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM378_17460 ba126741694d3eca6b4cbac1121a2cfc 177 Gene3D G3DSA:3.90.930.12 83 177 9.7E-40 T 15-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM378_04865 9fe249fe4df10672e2c49c850a0f4596 1157 SUPERFAMILY SSF52540 528 788 6.07E-64 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_04865 9fe249fe4df10672e2c49c850a0f4596 1157 SUPERFAMILY SSF52540 20 348 1.86E-100 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_04865 9fe249fe4df10672e2c49c850a0f4596 1157 Gene3D G3DSA:3.40.50.11180 32 341 5.3E-127 T 15-10-2018 AM378_04865 9fe249fe4df10672e2c49c850a0f4596 1157 Gene3D G3DSA:3.30.2060.10 136 221 5.3E-127 T 15-10-2018 AM378_04865 9fe249fe4df10672e2c49c850a0f4596 1157 Pfam PF03461 TRCF domain 1014 1105 7.6E-28 T 15-10-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 AM378_04865 9fe249fe4df10672e2c49c850a0f4596 1157 SUPERFAMILY SSF143517 1000 1152 6.41E-43 T 15-10-2018 IPR037235 TRCF-like, C-terminal domain AM378_04865 9fe249fe4df10672e2c49c850a0f4596 1157 Gene3D G3DSA:3.40.50.300 547 786 5.0E-236 T 15-10-2018 AM378_04865 9fe249fe4df10672e2c49c850a0f4596 1157 Gene3D G3DSA:2.30.30.840 488 546 5.0E-236 T 15-10-2018 AM378_04865 9fe249fe4df10672e2c49c850a0f4596 1157 SMART SM00490 831 915 2.2E-19 T 15-10-2018 IPR001650 Helicase, C-terminal AM378_04865 9fe249fe4df10672e2c49c850a0f4596 1157 SUPERFAMILY SSF141259 476 553 4.58E-24 T 15-10-2018 IPR036101 CarD-like/TRCF domain superfamily AM378_04865 9fe249fe4df10672e2c49c850a0f4596 1157 SUPERFAMILY SSF52540 787 995 2.38E-49 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_04865 9fe249fe4df10672e2c49c850a0f4596 1157 Pfam PF02559 CarD-like/TRCF domain 485 580 2.6E-25 T 15-10-2018 IPR003711 CarD-like/TRCF domain AM378_04865 9fe249fe4df10672e2c49c850a0f4596 1157 Gene3D G3DSA:3.90.1150.50 1009 1156 8.7E-46 T 15-10-2018 IPR037235 TRCF-like, C-terminal domain AM378_04865 9fe249fe4df10672e2c49c850a0f4596 1157 Hamap MF_00969 Transcription-repair-coupling factor [mfd]. 40 1133 27.886 T 15-10-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 AM378_04865 9fe249fe4df10672e2c49c850a0f4596 1157 Gene3D G3DSA:3.40.50.11140 362 458 1.1E-33 T 15-10-2018 AM378_04865 9fe249fe4df10672e2c49c850a0f4596 1157 Gene3D G3DSA:3.40.50.300 483 995 5.0E-236 T 15-10-2018 AM378_04865 9fe249fe4df10672e2c49c850a0f4596 1157 SMART SM00982 1013 1113 3.0E-47 T 15-10-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 AM378_04865 9fe249fe4df10672e2c49c850a0f4596 1157 TIGRFAM TIGR00580 mfd: transcription-repair coupling factor 153 1087 0.0 T 15-10-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 AM378_04865 9fe249fe4df10672e2c49c850a0f4596 1157 Pfam PF00271 Helicase conserved C-terminal domain 810 914 9.0E-18 T 15-10-2018 IPR001650 Helicase, C-terminal AM378_04865 9fe249fe4df10672e2c49c850a0f4596 1157 Pfam PF00270 DEAD/DEAH box helicase 610 770 1.4E-20 T 15-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AM378_04865 9fe249fe4df10672e2c49c850a0f4596 1157 SMART SM00487 605 795 2.4E-33 T 15-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AM378_04865 9fe249fe4df10672e2c49c850a0f4596 1157 SUPERFAMILY SSF52540 358 471 1.73E-26 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_04865 9fe249fe4df10672e2c49c850a0f4596 1157 SMART SM01058 484 581 9.4E-52 T 15-10-2018 IPR003711 CarD-like/TRCF domain AM378_05545 078c26f38a2b1caca753fb255545fa8d 335 SUPERFAMILY SSF81345 13 330 6.28E-80 T 15-10-2018 IPR037294 ABC transporter, BtuC-like AM378_05545 078c26f38a2b1caca753fb255545fa8d 335 Gene3D G3DSA:1.10.3470.10 8 332 9.7E-107 T 15-10-2018 IPR037294 ABC transporter, BtuC-like AM378_05545 078c26f38a2b1caca753fb255545fa8d 335 Pfam PF01032 FecCD transport family 30 330 7.4E-84 T 15-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 AM378_05545 078c26f38a2b1caca753fb255545fa8d 335 Hamap MF_01004 Vitamin B12 import system permease protein BtuC [btuC]. 7 333 32.701 T 15-10-2018 IPR023691 ABC transporter, vitamin B12 import, permease protein BtuC GO:0015889|GO:0016020 AM378_00575 4eb650f07695b4387ff9f68c6824f205 482 Pfam PF00990 Diguanylate cyclase, GGDEF domain 305 464 3.0E-43 T 15-10-2018 IPR000160 GGDEF domain AM378_00575 4eb650f07695b4387ff9f68c6824f205 482 Gene3D G3DSA:3.30.70.270 293 470 2.7E-52 T 15-10-2018 AM378_00575 4eb650f07695b4387ff9f68c6824f205 482 SUPERFAMILY SSF55073 310 468 9.42E-42 T 15-10-2018 IPR029787 Nucleotide cyclase AM378_00575 4eb650f07695b4387ff9f68c6824f205 482 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 301 467 1.8E-49 T 15-10-2018 IPR000160 GGDEF domain AM378_00575 4eb650f07695b4387ff9f68c6824f205 482 SMART SM00267 294 468 1.1E-54 T 15-10-2018 IPR000160 GGDEF domain AM378_23795 fc9e11f3917a59a670eedf70052608a1 72 Pfam PF05154 TM2 domain 3 53 4.2E-17 T 15-10-2018 IPR007829 TM2 domain AM378_07110 da1f3aa5d9e20c5ec0bba55ce08d285e 189 SUPERFAMILY SSF52317 3 187 7.88E-49 T 15-10-2018 IPR029062 Class I glutamine amidotransferase-like AM378_07110 da1f3aa5d9e20c5ec0bba55ce08d285e 189 Pfam PF01965 DJ-1/PfpI family 4 185 6.2E-49 T 15-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 AM378_07110 da1f3aa5d9e20c5ec0bba55ce08d285e 189 TIGRFAM TIGR01382 PfpI: intracellular protease, PfpI family 5 188 1.1E-52 T 15-10-2018 IPR006286 Deglycase PfpI AM378_07110 da1f3aa5d9e20c5ec0bba55ce08d285e 189 Gene3D G3DSA:3.40.50.880 1 189 5.9E-52 T 15-10-2018 IPR029062 Class I glutamine amidotransferase-like AM378_09295 a700139fd5df012e0421a430b12f6fe1 815 Pfam PF10145 Phage-related minor tail protein 240 440 1.7E-37 T 15-10-2018 IPR010090 Phage tail tape measure protein AM378_09295 a700139fd5df012e0421a430b12f6fe1 815 TIGRFAM TIGR01760 tape_meas_TP901: phage tail tape measure protein, TP901 family, core region 204 548 6.0E-91 T 15-10-2018 IPR010090 Phage tail tape measure protein AM378_22920 2ac82def93ce7a29655c95a645c7a55e 480 Gene3D G3DSA:3.40.50.300 203 474 3.0E-98 T 15-10-2018 AM378_22920 2ac82def93ce7a29655c95a645c7a55e 480 Pfam PF00437 Type II/IV secretion system protein 108 368 4.4E-81 T 15-10-2018 IPR001482 Type II/IV secretion system protein AM378_22920 2ac82def93ce7a29655c95a645c7a55e 480 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 296 310 - T 15-10-2018 IPR001482 Type II/IV secretion system protein AM378_22920 2ac82def93ce7a29655c95a645c7a55e 480 Gene3D G3DSA:3.30.450.90 68 200 1.1E-41 T 15-10-2018 AM378_22920 2ac82def93ce7a29655c95a645c7a55e 480 SUPERFAMILY SSF52540 91 470 2.41E-87 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_06760 4a5a0e58f1d89a0af8d1e10c94243e23 587 Pfam PF02954 Bacterial regulatory protein, Fis family 548 581 1.0E-11 T 15-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AM378_06760 4a5a0e58f1d89a0af8d1e10c94243e23 587 SUPERFAMILY SSF55781 49 184 8.63E-6 T 15-10-2018 AM378_06760 4a5a0e58f1d89a0af8d1e10c94243e23 587 Gene3D G3DSA:3.30.450.40 8 189 8.1E-44 T 15-10-2018 IPR029016 GAF-like domain superfamily AM378_06760 4a5a0e58f1d89a0af8d1e10c94243e23 587 Gene3D G3DSA:3.40.50.300 290 461 4.8E-52 T 15-10-2018 AM378_06760 4a5a0e58f1d89a0af8d1e10c94243e23 587 SUPERFAMILY SSF46689 543 581 1.59E-8 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AM378_06760 4a5a0e58f1d89a0af8d1e10c94243e23 587 Gene3D G3DSA:1.10.8.60 462 535 3.0E-10 T 15-10-2018 AM378_06760 4a5a0e58f1d89a0af8d1e10c94243e23 587 Gene3D G3DSA:1.10.10.60 543 584 2.0E-11 T 15-10-2018 AM378_06760 4a5a0e58f1d89a0af8d1e10c94243e23 587 SUPERFAMILY SSF52540 302 532 2.2E-55 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_06760 4a5a0e58f1d89a0af8d1e10c94243e23 587 Pfam PF00158 Sigma-54 interaction domain 297 455 4.9E-55 T 15-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 AM378_06760 4a5a0e58f1d89a0af8d1e10c94243e23 587 SMART SM00382 309 453 3.0E-8 T 15-10-2018 IPR003593 AAA+ ATPase domain AM378_06760 4a5a0e58f1d89a0af8d1e10c94243e23 587 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 565 585 4.2E-9 T 15-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AM378_06760 4a5a0e58f1d89a0af8d1e10c94243e23 587 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 548 565 4.2E-9 T 15-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AM378_06760 4a5a0e58f1d89a0af8d1e10c94243e23 587 Pfam PF01590 GAF domain 72 181 2.4E-5 T 15-10-2018 IPR003018 GAF domain GO:0005515 AM378_19840 b358e46e08baf88fea7a9599f139159a 196 Gene3D G3DSA:3.40.50.12740 3 195 3.7E-51 T 15-10-2018 AM378_19840 b358e46e08baf88fea7a9599f139159a 196 Pfam PF00072 Response regulator receiver domain 6 114 2.4E-22 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM378_19840 b358e46e08baf88fea7a9599f139159a 196 SMART SM00448 3 113 6.7E-21 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM378_19840 b358e46e08baf88fea7a9599f139159a 196 SUPERFAMILY SSF46894 123 195 4.42E-20 T 15-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AM378_19840 b358e46e08baf88fea7a9599f139159a 196 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 139 153 1.8E-12 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM378_19840 b358e46e08baf88fea7a9599f139159a 196 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 153 169 1.8E-12 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM378_19840 b358e46e08baf88fea7a9599f139159a 196 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 169 181 1.8E-12 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM378_19840 b358e46e08baf88fea7a9599f139159a 196 ProSitePatterns PS00622 LuxR-type HTH domain signature. 153 180 - T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM378_19840 b358e46e08baf88fea7a9599f139159a 196 Pfam PF00196 Bacterial regulatory proteins, luxR family 138 191 2.1E-19 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM378_19840 b358e46e08baf88fea7a9599f139159a 196 SMART SM00421 136 193 2.0E-22 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM378_19840 b358e46e08baf88fea7a9599f139159a 196 SUPERFAMILY SSF52172 2 129 1.12E-24 T 15-10-2018 IPR011006 CheY-like superfamily AM378_13205 528a6ddf5d67121b67a734bd65cf527e 149 Pfam PF01638 HxlR-like helix-turn-helix 19 104 4.1E-19 T 15-10-2018 IPR002577 Helix-turn-helix, HxlR type AM378_13205 528a6ddf5d67121b67a734bd65cf527e 149 Gene3D G3DSA:1.10.10.10 1 149 2.3E-42 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_13205 528a6ddf5d67121b67a734bd65cf527e 149 SUPERFAMILY SSF46785 5 142 1.64E-37 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM378_21870 4fe2a63d380c85c25f60b8de6efd1676 229 Pfam PF00982 Glycosyltransferase family 20 22 227 1.7E-42 T 15-10-2018 IPR001830 Glycosyl transferase, family 20 GO:0003824|GO:0005992 KEGG: 00500+2.4.1.15 AM378_21870 4fe2a63d380c85c25f60b8de6efd1676 229 Gene3D G3DSA:3.40.50.2000 1 228 3.5E-55 T 15-10-2018 AM378_21870 4fe2a63d380c85c25f60b8de6efd1676 229 SUPERFAMILY SSF53756 12 225 4.71E-40 T 15-10-2018 AM378_00835 40c743e90f4b2a73d8126db62190b98e 407 Gene3D G3DSA:3.30.420.40 94 387 1.1E-90 T 15-10-2018 AM378_00835 40c743e90f4b2a73d8126db62190b98e 407 ProSitePatterns PS01125 ROK family signature. 221 248 - T 15-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 AM378_00835 40c743e90f4b2a73d8126db62190b98e 407 Pfam PF00480 ROK family 90 393 4.6E-90 T 15-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 AM378_00835 40c743e90f4b2a73d8126db62190b98e 407 Pfam PF01047 MarR family 26 64 6.0E-7 T 15-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AM378_00835 40c743e90f4b2a73d8126db62190b98e 407 Gene3D G3DSA:3.30.420.40 211 379 1.1E-90 T 15-10-2018 AM378_00835 40c743e90f4b2a73d8126db62190b98e 407 SUPERFAMILY SSF46785 15 80 1.44E-17 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM378_00835 40c743e90f4b2a73d8126db62190b98e 407 Gene3D G3DSA:1.10.10.10 6 82 1.1E-20 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_00835 40c743e90f4b2a73d8126db62190b98e 407 SUPERFAMILY SSF53067 89 395 3.48E-55 T 15-10-2018 AM378_21880 1d91e5a7ca15cf16700a73fa12d5c15c 456 Gene3D G3DSA:3.30.590.10 131 453 8.7E-88 T 15-10-2018 AM378_21880 1d91e5a7ca15cf16700a73fa12d5c15c 456 SUPERFAMILY SSF54368 37 130 1.83E-5 T 15-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AM378_21880 1d91e5a7ca15cf16700a73fa12d5c15c 456 SUPERFAMILY SSF55931 133 456 7.36E-86 T 15-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 AM378_21880 1d91e5a7ca15cf16700a73fa12d5c15c 456 SMART SM01230 133 378 7.6E-78 T 15-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AM378_21880 1d91e5a7ca15cf16700a73fa12d5c15c 456 Pfam PF00120 Glutamine synthetase, catalytic domain 134 453 3.0E-82 T 15-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AM378_06065 07be3def1d7245c59bff439e2a27b46c 198 Gene3D G3DSA:3.90.79.10 5 194 1.9E-50 T 15-10-2018 AM378_06065 07be3def1d7245c59bff439e2a27b46c 198 SUPERFAMILY SSF55811 10 192 1.35E-40 T 15-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 AM378_06065 07be3def1d7245c59bff439e2a27b46c 198 TIGRFAM TIGR00052 TIGR00052: nudix-type nucleoside diphosphatase, YffH/AdpP family 9 189 2.6E-45 T 15-10-2018 IPR004385 Nucleoside diphosphate pyrophosphatase GO:0016818|GO:0046872 Reactome: R-HSA-480985 AM378_17805 a22dd712c872f6b14d0d3b253e8403e8 225 PIRSF PIRSF001461 1 225 3.2E-106 T 15-10-2018 IPR026019 Ribulose-phosphate 3-epimerase GO:0004750|GO:0006098 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 AM378_17805 a22dd712c872f6b14d0d3b253e8403e8 225 TIGRFAM TIGR01163 rpe: ribulose-phosphate 3-epimerase 5 216 2.7E-97 T 15-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 AM378_17805 a22dd712c872f6b14d0d3b253e8403e8 225 ProSitePatterns PS01085 Ribulose-phosphate 3-epimerase family signature 1. 33 47 - T 15-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 AM378_17805 a22dd712c872f6b14d0d3b253e8403e8 225 Pfam PF00834 Ribulose-phosphate 3 epimerase family 6 203 3.6E-92 T 15-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 AM378_17805 a22dd712c872f6b14d0d3b253e8403e8 225 SUPERFAMILY SSF51366 3 218 1.36E-75 T 15-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 AM378_17805 a22dd712c872f6b14d0d3b253e8403e8 225 Gene3D G3DSA:3.20.20.70 4 222 2.3E-83 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM378_17805 a22dd712c872f6b14d0d3b253e8403e8 225 ProSitePatterns PS01086 Ribulose-phosphate 3-epimerase family signature 2. 136 158 - T 15-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 AM378_15840 8a70e2cf5d4ea0f9adcbf772389d8e0e 325 TIGRFAM TIGR02797 exbB: tonB-system energizer ExbB 92 303 4.0E-96 T 15-10-2018 IPR014164 TonB-system energizer ExbB type-1 GO:0016020|GO:0022857|GO:0055085 AM378_15840 8a70e2cf5d4ea0f9adcbf772389d8e0e 325 Pfam PF01618 MotA/TolQ/ExbB proton channel family 177 285 1.9E-34 T 15-10-2018 IPR002898 MotA/TolQ/ExbB proton channel AM378_13115 8a87c1fe2b533e7899c5e6b5ea1a7376 112 SUPERFAMILY SSF160113 4 61 1.26E-18 T 15-10-2018 IPR036913 YegP-like superfamily AM378_13115 8a87c1fe2b533e7899c5e6b5ea1a7376 112 SUPERFAMILY SSF160113 55 109 5.36E-17 T 15-10-2018 IPR036913 YegP-like superfamily AM378_13115 8a87c1fe2b533e7899c5e6b5ea1a7376 112 Gene3D G3DSA:2.30.29.80 2 112 4.7E-47 T 15-10-2018 AM378_13115 8a87c1fe2b533e7899c5e6b5ea1a7376 112 Pfam PF07411 Domain of unknown function (DUF1508) 11 58 5.7E-22 T 15-10-2018 IPR010879 Domain of unknown function DUF1508 AM378_13115 8a87c1fe2b533e7899c5e6b5ea1a7376 112 Pfam PF07411 Domain of unknown function (DUF1508) 63 109 3.5E-22 T 15-10-2018 IPR010879 Domain of unknown function DUF1508 AM378_23890 a552a4e0ffc3abfa86660181190a99e8 367 Pfam PF07759 Protein of unknown function (DUF1615) 55 364 2.8E-146 T 15-10-2018 IPR011673 Protein of unknown function DUF1615 AM378_23890 a552a4e0ffc3abfa86660181190a99e8 367 ProDom PD041438 LIPOPROTEIN YAIW PRECURSOR SIGNAL MEMBRANE OUTER LIPOPROTEIN ECS0428 XAC0592 SECRETED 41 364 1.0E-146 T 15-10-2018 IPR011673 Protein of unknown function DUF1615 AM378_14055 7500019558328a8ad0e9d7638d326f46 172 PRINTS PR00598 Bacterial regulatory protein MarR family signature 72 88 6.3E-23 T 15-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AM378_14055 7500019558328a8ad0e9d7638d326f46 172 PRINTS PR00598 Bacterial regulatory protein MarR family signature 89 104 6.3E-23 T 15-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AM378_14055 7500019558328a8ad0e9d7638d326f46 172 PRINTS PR00598 Bacterial regulatory protein MarR family signature 108 124 6.3E-23 T 15-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AM378_14055 7500019558328a8ad0e9d7638d326f46 172 PRINTS PR00598 Bacterial regulatory protein MarR family signature 138 158 6.3E-23 T 15-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AM378_14055 7500019558328a8ad0e9d7638d326f46 172 Gene3D G3DSA:1.10.10.10 11 165 2.9E-30 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_14055 7500019558328a8ad0e9d7638d326f46 172 SMART SM00347 46 148 1.7E-32 T 15-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AM378_14055 7500019558328a8ad0e9d7638d326f46 172 ProSitePatterns PS01117 MarR-type HTH domain signature. 87 121 - T 15-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site AM378_14055 7500019558328a8ad0e9d7638d326f46 172 Pfam PF01047 MarR family 53 112 3.6E-16 T 15-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AM378_14055 7500019558328a8ad0e9d7638d326f46 172 SUPERFAMILY SSF46785 20 163 2.13E-29 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM378_05940 3199cbe26bfaa5e521ebd14ec83c9224 221 SMART SM00471 33 150 4.3E-5 T 15-10-2018 IPR003607 HD/PDEase domain AM378_05940 3199cbe26bfaa5e521ebd14ec83c9224 221 Gene3D G3DSA:1.10.3210.50 15 221 2.4E-68 T 15-10-2018 AM378_05940 3199cbe26bfaa5e521ebd14ec83c9224 221 SUPERFAMILY SSF109604 20 221 5.02E-58 T 15-10-2018 AM378_05940 3199cbe26bfaa5e521ebd14ec83c9224 221 Pfam PF01966 HD domain 40 140 1.3E-9 T 15-10-2018 IPR006674 HD domain AM378_11460 8e0540080f210d8d0f4e85a76dd15c55 398 Gene3D G3DSA:1.20.1720.10 11 389 4.9E-106 T 15-10-2018 AM378_11460 8e0540080f210d8d0f4e85a76dd15c55 398 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 9 390 6.4E-140 T 15-10-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0006855|GO:0015238|GO:0016021 AM378_11460 8e0540080f210d8d0f4e85a76dd15c55 398 Pfam PF07690 Major Facilitator Superfamily 16 358 6.5E-47 T 15-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM378_11460 8e0540080f210d8d0f4e85a76dd15c55 398 SUPERFAMILY SSF103473 7 396 6.67E-70 T 15-10-2018 IPR036259 MFS transporter superfamily AM378_04910 e347de572d82a89626df633c8c7711de 461 Gene3D G3DSA:3.90.110.10 84 297 1.8E-75 T 15-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 AM378_04910 e347de572d82a89626df633c8c7711de 461 Gene3D G3DSA:3.90.110.10 302 461 1.4E-36 T 15-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 AM378_04910 e347de572d82a89626df633c8c7711de 461 Gene3D G3DSA:3.40.50.720 2 165 1.8E-75 T 15-10-2018 AM378_04910 e347de572d82a89626df633c8c7711de 461 SUPERFAMILY SSF56327 166 456 2.5E-53 T 15-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 AM378_04910 e347de572d82a89626df633c8c7711de 461 PRINTS PR00732 Glycosyl hydrolase family 4 signature 71 87 9.0E-21 T 15-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 AM378_04910 e347de572d82a89626df633c8c7711de 461 PRINTS PR00732 Glycosyl hydrolase family 4 signature 92 105 9.0E-21 T 15-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 AM378_04910 e347de572d82a89626df633c8c7711de 461 PRINTS PR00732 Glycosyl hydrolase family 4 signature 136 153 9.0E-21 T 15-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 AM378_04910 e347de572d82a89626df633c8c7711de 461 PRINTS PR00732 Glycosyl hydrolase family 4 signature 162 173 9.0E-21 T 15-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 AM378_04910 e347de572d82a89626df633c8c7711de 461 PRINTS PR00732 Glycosyl hydrolase family 4 signature 2 17 9.0E-21 T 15-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 AM378_04910 e347de572d82a89626df633c8c7711de 461 PRINTS PR00732 Glycosyl hydrolase family 4 signature 188 200 9.0E-21 T 15-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 AM378_04910 e347de572d82a89626df633c8c7711de 461 Pfam PF11975 Family 4 glycosyl hydrolase C-terminal domain 192 436 5.2E-39 T 15-10-2018 IPR022616 Glycosyl hydrolase, family 4, C-terminal GO:0004553 AM378_04910 e347de572d82a89626df633c8c7711de 461 Pfam PF02056 Family 4 glycosyl hydrolase 2 181 4.0E-33 T 15-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 AM378_04910 e347de572d82a89626df633c8c7711de 461 SUPERFAMILY SSF51735 1 157 4.07E-41 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily AM378_21625 710957f4f96dde5206a82fd80701226e 522 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 70 439 2.1E-71 T 15-10-2018 IPR000914 Solute-binding protein family 5 domain AM378_21625 710957f4f96dde5206a82fd80701226e 522 Gene3D G3DSA:3.90.76.10 41 201 3.0E-98 T 15-10-2018 AM378_21625 710957f4f96dde5206a82fd80701226e 522 SUPERFAMILY SSF53850 21 517 6.15E-101 T 15-10-2018 AM378_21625 710957f4f96dde5206a82fd80701226e 522 Gene3D G3DSA:3.40.190.10 202 508 3.0E-98 T 15-10-2018 AM378_21625 710957f4f96dde5206a82fd80701226e 522 Gene3D G3DSA:3.10.105.10 283 498 3.0E-98 T 15-10-2018 AM378_21625 710957f4f96dde5206a82fd80701226e 522 PIRSF PIRSF002741 4 519 1.9E-67 T 15-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 AM378_10120 6032a74cc355163ec32004afa395405e 144 Gene3D G3DSA:2.10.109.10 30 143 3.8E-47 T 15-10-2018 AM378_10120 6032a74cc355163ec32004afa395405e 144 Pfam PF00717 Peptidase S24-like 62 126 1.5E-13 T 15-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C AM378_10120 6032a74cc355163ec32004afa395405e 144 SUPERFAMILY SSF51306 19 139 5.58E-34 T 15-10-2018 IPR036286 LexA/Signal peptidase-like superfamily AM378_10120 6032a74cc355163ec32004afa395405e 144 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 57 67 1.2E-10 T 15-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 AM378_10120 6032a74cc355163ec32004afa395405e 144 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 68 79 1.2E-10 T 15-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 AM378_10120 6032a74cc355163ec32004afa395405e 144 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 96 108 1.2E-10 T 15-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 AM378_07405 fa3d5434566f0f5cc25d785d06b676f9 256 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 231 251 4.1E-8 T 15-10-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal AM378_07405 fa3d5434566f0f5cc25d785d06b676f9 256 SMART SM00382 29 252 9.6E-7 T 15-10-2018 IPR003593 AAA+ ATPase domain AM378_07405 fa3d5434566f0f5cc25d785d06b676f9 256 Pfam PF00005 ABC transporter 21 180 4.9E-29 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM378_07405 fa3d5434566f0f5cc25d785d06b676f9 256 Gene3D G3DSA:3.40.50.300 1 252 4.8E-60 T 15-10-2018 AM378_07405 fa3d5434566f0f5cc25d785d06b676f9 256 SUPERFAMILY SSF52540 3 250 1.54E-61 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_02920 07c5f32dfb3809589c28466dd63cba0c 299 Pfam PF01634 ATP phosphoribosyltransferase 54 219 4.9E-48 T 15-10-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 AM378_02920 07c5f32dfb3809589c28466dd63cba0c 299 Hamap MF_00079 ATP phosphoribosyltransferase [hisG]. 6 299 35.991 T 15-10-2018 IPR020621 ATP phosphoribosyltransferase HisG, long form GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17 AM378_02920 07c5f32dfb3809589c28466dd63cba0c 299 SUPERFAMILY SSF53850 6 224 5.88E-70 T 15-10-2018 AM378_02920 07c5f32dfb3809589c28466dd63cba0c 299 ProSitePatterns PS01316 ATP phosphoribosyltransferase signature. 156 177 - T 15-10-2018 IPR018198 ATP phosphoribosyltransferase, conserved site GO:0003879 KEGG: 00340+2.4.2.17 AM378_02920 07c5f32dfb3809589c28466dd63cba0c 299 SUPERFAMILY SSF54913 226 298 4.34E-21 T 15-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta AM378_02920 07c5f32dfb3809589c28466dd63cba0c 299 TIGRFAM TIGR00070 hisG: ATP phosphoribosyltransferase 7 197 4.1E-57 T 15-10-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 AM378_02920 07c5f32dfb3809589c28466dd63cba0c 299 TIGRFAM TIGR03455 HisG_C-term: ATP phosphoribosyltransferase, C-terminal domain 201 298 1.1E-31 T 15-10-2018 IPR013115 Histidine biosynthesis HisG, C-terminal GO:0000105|GO:0000287|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 AM378_02920 07c5f32dfb3809589c28466dd63cba0c 299 Pfam PF08029 HisG, C-terminal domain 223 296 1.3E-23 T 15-10-2018 IPR013115 Histidine biosynthesis HisG, C-terminal GO:0000105|GO:0000287|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 AM378_02920 07c5f32dfb3809589c28466dd63cba0c 299 Gene3D G3DSA:3.40.190.10 103 192 1.0E-74 T 15-10-2018 AM378_02920 07c5f32dfb3809589c28466dd63cba0c 299 Gene3D G3DSA:3.40.190.10 7 221 1.0E-74 T 15-10-2018 AM378_02920 07c5f32dfb3809589c28466dd63cba0c 299 Gene3D G3DSA:3.30.70.120 226 299 7.9E-34 T 15-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal AM378_00895 85c68a3d87146e6ce344456077d1ef4b 180 PIRSF PIRSF019401 1 180 8.3E-50 T 15-10-2018 IPR005621 Negative modulator of initiation of replication SeqA GO:0003677|GO:0032297 AM378_00895 85c68a3d87146e6ce344456077d1ef4b 180 Gene3D G3DSA:1.20.1380.10 67 180 4.3E-47 T 15-10-2018 IPR036835 Replication modulator SeqA, C-terminal DNA-binding domain superfamily GO:0003677 AM378_00895 85c68a3d87146e6ce344456077d1ef4b 180 SUPERFAMILY SSF82808 65 179 2.09E-48 T 15-10-2018 IPR036835 Replication modulator SeqA, C-terminal DNA-binding domain superfamily GO:0003677 AM378_00895 85c68a3d87146e6ce344456077d1ef4b 180 Gene3D G3DSA:1.10.1220.10 1 40 7.3E-25 T 15-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 AM378_00895 85c68a3d87146e6ce344456077d1ef4b 180 Pfam PF17206 SeqA protein N-terminal domain 1 36 6.6E-25 T 15-10-2018 IPR033761 Negative modulator of initiation of replication SeqA, N-terminal AM378_00895 85c68a3d87146e6ce344456077d1ef4b 180 SUPERFAMILY SSF47598 1 35 6.89E-14 T 15-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 AM378_00895 85c68a3d87146e6ce344456077d1ef4b 180 Pfam PF03925 SeqA protein C-terminal domain 70 178 2.1E-49 T 15-10-2018 IPR026577 Replication modulator SeqA, C-terminal DNA-binding domain GO:0003677 AM378_00895 85c68a3d87146e6ce344456077d1ef4b 180 Hamap MF_00908 Negative modulator of initiation of replication [seqA]. 1 180 43.613 T 15-10-2018 IPR005621 Negative modulator of initiation of replication SeqA GO:0003677|GO:0032297 AM378_10425 3d96b5f4f5aecb1f52d6d983c6ab45be 491 Gene3D G3DSA:3.40.605.10 31 478 5.2E-181 T 15-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 AM378_10425 3d96b5f4f5aecb1f52d6d983c6ab45be 491 SUPERFAMILY SSF53720 10 487 5.89E-169 T 15-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 AM378_10425 3d96b5f4f5aecb1f52d6d983c6ab45be 491 Gene3D G3DSA:3.40.309.10 264 453 5.2E-181 T 15-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 AM378_10425 3d96b5f4f5aecb1f52d6d983c6ab45be 491 TIGRFAM TIGR01780 SSADH: succinate-semialdehyde dehydrogenase 37 482 1.7E-216 T 15-10-2018 IPR010102 Succinate semialdehyde dehydrogenase GO:0009013|GO:0009450|GO:0055114 Reactome: R-HSA-916853 AM378_10425 3d96b5f4f5aecb1f52d6d983c6ab45be 491 Pfam PF00171 Aldehyde dehydrogenase family 25 483 1.3E-168 T 15-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 AM378_10425 3d96b5f4f5aecb1f52d6d983c6ab45be 491 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 260 267 - T 15-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 AM378_10425 3d96b5f4f5aecb1f52d6d983c6ab45be 491 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 288 299 - T 15-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 AM378_04355 dfd880b8851c90b3691800a020ea3bf4 413 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 155 171 - T 15-10-2018 IPR018201 Beta-ketoacyl synthase, active site AM378_04355 dfd880b8851c90b3691800a020ea3bf4 413 SUPERFAMILY SSF53901 215 412 3.84E-74 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 AM378_04355 dfd880b8851c90b3691800a020ea3bf4 413 TIGRFAM TIGR03150 fabF: beta-ketoacyl-acyl-carrier-protein synthase II 4 411 1.2E-195 T 15-10-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 AM378_04355 dfd880b8851c90b3691800a020ea3bf4 413 Gene3D G3DSA:3.40.47.10 1 255 5.7E-89 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 AM378_04355 dfd880b8851c90b3691800a020ea3bf4 413 SUPERFAMILY SSF53901 4 252 3.76E-77 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 AM378_04355 dfd880b8851c90b3691800a020ea3bf4 413 SMART SM00825 Beta-ketoacyl synthase 6 413 7.5E-16 T 15-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain AM378_04355 dfd880b8851c90b3691800a020ea3bf4 413 Gene3D G3DSA:3.40.47.10 261 413 1.4E-56 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 AM378_04355 dfd880b8851c90b3691800a020ea3bf4 413 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 255 369 3.2E-41 T 15-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal AM378_04355 dfd880b8851c90b3691800a020ea3bf4 413 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 4 247 6.6E-62 T 15-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal AM378_04355 dfd880b8851c90b3691800a020ea3bf4 413 PIRSF PIRSF000447 1 413 6.0E-202 T 15-10-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 AM378_06405 1dcc6a55fd3fb32b336c51080968c89b 740 Gene3D G3DSA:3.90.1170.50 189 318 5.4E-8 T 15-10-2018 AM378_06405 1dcc6a55fd3fb32b336c51080968c89b 740 Gene3D G3DSA:3.30.365.10 43 181 8.1E-21 T 15-10-2018 AM378_06405 1dcc6a55fd3fb32b336c51080968c89b 740 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 591 680 6.8E-13 T 15-10-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 AM378_06405 1dcc6a55fd3fb32b336c51080968c89b 740 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 316 557 1.7E-20 T 15-10-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 AM378_06405 1dcc6a55fd3fb32b336c51080968c89b 740 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 47 179 1.8E-14 T 15-10-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 AM378_06405 1dcc6a55fd3fb32b336c51080968c89b 740 PIRSF PIRSF036389 1 732 6.5E-222 T 15-10-2018 IPR012368 Oxidoreductase molybdopterin-binding subunit, IorB-related AM378_06405 1dcc6a55fd3fb32b336c51080968c89b 740 Gene3D G3DSA:3.30.365.10 322 557 4.7E-42 T 15-10-2018 AM378_06405 1dcc6a55fd3fb32b336c51080968c89b 740 SUPERFAMILY SSF56003 45 249 2.58E-39 T 15-10-2018 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily GO:0016491|GO:0055114 AM378_06405 1dcc6a55fd3fb32b336c51080968c89b 740 Gene3D G3DSA:3.30.365.10 346 446 4.7E-42 T 15-10-2018 AM378_06405 1dcc6a55fd3fb32b336c51080968c89b 740 Gene3D G3DSA:3.30.365.10 575 727 2.4E-30 T 15-10-2018 AM378_06405 1dcc6a55fd3fb32b336c51080968c89b 740 SUPERFAMILY SSF56003 317 715 2.75E-94 T 15-10-2018 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily GO:0016491|GO:0055114 AM378_06405 1dcc6a55fd3fb32b336c51080968c89b 740 SMART SM01008 216 294 9.3E-16 T 15-10-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead AM378_14365 26ded2d4acd36e7a8c6c180987f58fae 110 Pfam PF04287 tRNA pseudouridine synthase C 9 104 1.5E-35 T 15-10-2018 IPR023376 YqcC-like domain AM378_14365 26ded2d4acd36e7a8c6c180987f58fae 110 Gene3D G3DSA:1.20.1440.40 3 107 2.2E-35 T 15-10-2018 IPR036814 YqcC-like superfamily AM378_14365 26ded2d4acd36e7a8c6c180987f58fae 110 PIRSF PIRSF006257 3 110 2.0E-39 T 15-10-2018 IPR007384 Protein of unknown function UCP006257 AM378_14365 26ded2d4acd36e7a8c6c180987f58fae 110 SUPERFAMILY SSF158452 3 108 1.31E-38 T 15-10-2018 IPR036814 YqcC-like superfamily AM378_00015 f5b4aa496e42140b09f89a1b05c01913 137 Gene3D G3DSA:3.10.129.10 1 132 5.3E-37 T 15-10-2018 AM378_00015 f5b4aa496e42140b09f89a1b05c01913 137 SUPERFAMILY SSF54637 5 129 3.1E-36 T 15-10-2018 IPR029069 HotDog domain superfamily AM378_00015 f5b4aa496e42140b09f89a1b05c01913 137 PIRSF PIRSF003230 1 134 4.8E-21 T 15-10-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 AM378_00015 f5b4aa496e42140b09f89a1b05c01913 137 TIGRFAM TIGR00051 TIGR00051: acyl-CoA thioester hydrolase, YbgC/YbaW family 7 117 6.0E-31 T 15-10-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 AM378_00015 f5b4aa496e42140b09f89a1b05c01913 137 Pfam PF13279 Thioesterase-like superfamily 11 120 1.6E-17 T 15-10-2018 AM378_06470 aefdc0e17b065d6009f08553da07a2f0 351 TIGRFAM TIGR01430 aden_deam: adenosine deaminase 18 335 1.6E-80 T 15-10-2018 IPR006330 Adenosine/adenine deaminase GO:0019239 Reactome: R-HSA-74217 AM378_06470 aefdc0e17b065d6009f08553da07a2f0 351 Gene3D G3DSA:3.20.20.140 2 349 5.1E-87 T 15-10-2018 AM378_06470 aefdc0e17b065d6009f08553da07a2f0 351 Pfam PF00962 Adenosine/AMP deaminase 18 332 2.9E-65 T 15-10-2018 IPR001365 Adenosine/AMP deaminase domain GO:0019239 Reactome: R-HSA-74217 AM378_06470 aefdc0e17b065d6009f08553da07a2f0 351 SUPERFAMILY SSF51556 16 339 4.16E-64 T 15-10-2018 IPR032466 Metal-dependent hydrolase AM378_05220 af979d624751117c41571a3efcced383 251 Pfam PF00392 Bacterial regulatory proteins, gntR family 22 84 2.5E-22 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM378_05220 af979d624751117c41571a3efcced383 251 SMART SM00345 25 84 6.8E-21 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM378_05220 af979d624751117c41571a3efcced383 251 SUPERFAMILY SSF46785 17 88 1.0E-22 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM378_05220 af979d624751117c41571a3efcced383 251 SUPERFAMILY SSF64288 72 247 1.1E-42 T 15-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily AM378_05220 af979d624751117c41571a3efcced383 251 SMART SM00866 105 242 6.5E-35 T 15-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 AM378_05220 af979d624751117c41571a3efcced383 251 Gene3D G3DSA:3.40.1410.10 103 238 9.1E-36 T 15-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily AM378_05220 af979d624751117c41571a3efcced383 251 TIGRFAM TIGR02018 his_ut_repres: histidine utilization repressor 20 248 1.6E-104 T 15-10-2018 IPR010248 Histidine utilization repressor GO:0003677|GO:0006547|GO:0045892 AM378_05220 af979d624751117c41571a3efcced383 251 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 58 74 1.1E-9 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM378_05220 af979d624751117c41571a3efcced383 251 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 44 58 1.1E-9 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM378_05220 af979d624751117c41571a3efcced383 251 Gene3D G3DSA:1.10.10.10 19 88 8.4E-25 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_05220 af979d624751117c41571a3efcced383 251 Pfam PF07702 UTRA domain 105 242 1.1E-34 T 15-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 AM378_19110 132ff6bcd2c764f45ee0b6e66d65993e 457 SMART SM00729 52 272 1.5E-55 T 15-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 AM378_19110 132ff6bcd2c764f45ee0b6e66d65993e 457 Gene3D G3DSA:3.80.30.20 1 363 3.3E-137 T 15-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe AM378_19110 132ff6bcd2c764f45ee0b6e66d65993e 457 SUPERFAMILY SSF102114 6 444 1.27E-144 T 15-10-2018 AM378_19110 132ff6bcd2c764f45ee0b6e66d65993e 457 Gene3D G3DSA:1.10.10.920 364 457 3.8E-36 T 15-10-2018 AM378_19110 132ff6bcd2c764f45ee0b6e66d65993e 457 Pfam PF06969 HemN C-terminal domain 363 431 6.6E-11 T 15-10-2018 IPR010723 HemN, C-terminal AM378_19110 132ff6bcd2c764f45ee0b6e66d65993e 457 PIRSF PIRSF000167 3 454 1.2E-173 T 15-10-2018 IPR004558 Oxygen-independent coproporphyrinogen III oxidase HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.98.3|MetaCyc: PWY-5531 AM378_19110 132ff6bcd2c764f45ee0b6e66d65993e 457 TIGRFAM TIGR00538 hemN: oxygen-independent coproporphyrinogen III oxidase 8 457 2.6E-220 T 15-10-2018 IPR004558 Oxygen-independent coproporphyrinogen III oxidase HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.98.3|MetaCyc: PWY-5531 AM378_19110 132ff6bcd2c764f45ee0b6e66d65993e 457 Pfam PF04055 Radical SAM superfamily 57 226 1.6E-16 T 15-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AM378_24280 4dd11469686c7385be3d8e668e080fcf 482 Gene3D G3DSA:3.30.2130.30 1 174 1.5E-36 T 15-10-2018 AM378_24280 4dd11469686c7385be3d8e668e080fcf 482 SUPERFAMILY SSF52402 174 372 1.52E-42 T 15-10-2018 AM378_24280 4dd11469686c7385be3d8e668e080fcf 482 Hamap MF_00021 tRNA sulfurtransferase [thiI]. 1 482 230.316 T 15-10-2018 IPR003720 tRNA sulfurtransferase ThiI GO:0005737|GO:0016783|GO:0034227 KEGG: 00730+2.8.1.4 AM378_24280 4dd11469686c7385be3d8e668e080fcf 482 Gene3D G3DSA:3.40.250.10 397 482 1.3E-7 T 15-10-2018 IPR036873 Rhodanese-like domain superfamily AM378_24280 4dd11469686c7385be3d8e668e080fcf 482 Pfam PF02568 Thiamine biosynthesis protein (ThiI) 175 369 9.8E-79 T 15-10-2018 IPR020536 Thil, AANH domain GO:0004810 KEGG: 00730+2.8.1.4 AM378_24280 4dd11469686c7385be3d8e668e080fcf 482 SUPERFAMILY SSF52821 405 481 1.01E-9 T 15-10-2018 IPR036873 Rhodanese-like domain superfamily AM378_24280 4dd11469686c7385be3d8e668e080fcf 482 Gene3D G3DSA:3.40.50.620 175 396 4.2E-54 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM378_24280 4dd11469686c7385be3d8e668e080fcf 482 SUPERFAMILY SSF143437 1 173 9.24E-47 T 15-10-2018 AM378_24280 4dd11469686c7385be3d8e668e080fcf 482 TIGRFAM TIGR00342 TIGR00342: tRNA sulfurtransferase ThiI 4 373 6.7E-136 T 15-10-2018 IPR003720 tRNA sulfurtransferase ThiI GO:0005737|GO:0016783|GO:0034227 KEGG: 00730+2.8.1.4 AM378_24280 4dd11469686c7385be3d8e668e080fcf 482 TIGRFAM TIGR04271 ThiI_C_thiazole: thiazole biosynthesis domain 383 482 9.6E-43 T 15-10-2018 IPR026340 Thiazole biosynthesis domain GO:0052837 KEGG: 00730+2.8.1.4 AM378_24280 4dd11469686c7385be3d8e668e080fcf 482 SMART SM00981 75 165 2.9E-22 T 15-10-2018 IPR004114 THUMP domain GO:0003723 AM378_24280 4dd11469686c7385be3d8e668e080fcf 482 Pfam PF02926 THUMP domain 29 162 2.2E-23 T 15-10-2018 IPR004114 THUMP domain GO:0003723 AM378_15165 47fd164ba96f882abbf5d5c16e410f61 343 SUPERFAMILY SSF51726 7 341 1.96E-68 T 15-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 AM378_15165 47fd164ba96f882abbf5d5c16e410f61 343 PIRSF PIRSF005632 1 343 2.2E-199 T 15-10-2018 IPR016456 Predicted cobalamin-independent methionine synthase, catalytic subunit AM378_15165 47fd164ba96f882abbf5d5c16e410f61 343 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 5 329 4.2E-38 T 15-10-2018 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 AM378_15165 47fd164ba96f882abbf5d5c16e410f61 343 Gene3D G3DSA:3.20.20.210 1 343 1.4E-134 T 15-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 AM378_06060 684e2e2521e4ce336f334d141a9f13ef 251 SMART SM00420 6 58 9.1E-15 T 15-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AM378_06060 684e2e2521e4ce336f334d141a9f13ef 251 Pfam PF08220 DeoR-like helix-turn-helix domain 6 60 1.7E-16 T 15-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AM378_06060 684e2e2521e4ce336f334d141a9f13ef 251 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 8.0E-10 T 15-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AM378_06060 684e2e2521e4ce336f334d141a9f13ef 251 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 8.0E-10 T 15-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AM378_06060 684e2e2521e4ce336f334d141a9f13ef 251 Gene3D G3DSA:1.10.10.10 3 97 7.7E-8 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_06060 684e2e2521e4ce336f334d141a9f13ef 251 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 15-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 AM378_06060 684e2e2521e4ce336f334d141a9f13ef 251 Pfam PF00455 DeoR C terminal sensor domain 75 230 4.9E-42 T 15-10-2018 IPR014036 DeoR C-terminal sensor domain AM378_06060 684e2e2521e4ce336f334d141a9f13ef 251 SUPERFAMILY SSF100950 75 230 2.02E-27 T 15-10-2018 IPR037171 NagB/RpiA transferase-like AM378_06060 684e2e2521e4ce336f334d141a9f13ef 251 SMART SM01134 71 232 6.0E-60 T 15-10-2018 AM378_06060 684e2e2521e4ce336f334d141a9f13ef 251 SUPERFAMILY SSF46785 4 61 6.54E-13 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM378_15195 fb3afdfb0fb4dcbdd08513d556247c90 338 PIRSF PIRSF000149 1 337 1.1E-129 T 15-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM378_15195 fb3afdfb0fb4dcbdd08513d556247c90 338 SUPERFAMILY SSF55347 155 317 9.82E-56 T 15-10-2018 AM378_15195 fb3afdfb0fb4dcbdd08513d556247c90 338 SUPERFAMILY SSF51735 1 174 2.21E-53 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily AM378_15195 fb3afdfb0fb4dcbdd08513d556247c90 338 Gene3D G3DSA:3.40.50.720 4 328 1.5E-129 T 15-10-2018 AM378_15195 fb3afdfb0fb4dcbdd08513d556247c90 338 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 160 316 3.6E-52 T 15-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM378_15195 fb3afdfb0fb4dcbdd08513d556247c90 338 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 153 160 - T 15-10-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM378_15195 fb3afdfb0fb4dcbdd08513d556247c90 338 TIGRFAM TIGR01532 E4PD_g-proteo: erythrose-4-phosphate dehydrogenase 4 328 4.2E-185 T 15-10-2018 IPR006422 D-erythrose-4-phosphate dehydrogenase GO:0005737|GO:0042823|GO:0048001|GO:0051287|GO:0055114 KEGG: 00750+1.2.1.72 AM378_15195 fb3afdfb0fb4dcbdd08513d556247c90 338 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 104 3.7E-33 T 15-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM378_15195 fb3afdfb0fb4dcbdd08513d556247c90 338 Gene3D G3DSA:3.30.360.10 154 318 1.5E-129 T 15-10-2018 AM378_15195 fb3afdfb0fb4dcbdd08513d556247c90 338 Hamap MF_01640 D-erythrose-4-phosphate dehydrogenase [epd]. 2 337 64.649 T 15-10-2018 IPR006422 D-erythrose-4-phosphate dehydrogenase GO:0005737|GO:0042823|GO:0048001|GO:0051287|GO:0055114 KEGG: 00750+1.2.1.72 AM378_15195 fb3afdfb0fb4dcbdd08513d556247c90 338 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 232 249 1.6E-29 T 15-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM378_15195 fb3afdfb0fb4dcbdd08513d556247c90 338 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 272 287 1.6E-29 T 15-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM378_15195 fb3afdfb0fb4dcbdd08513d556247c90 338 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 112 125 1.6E-29 T 15-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM378_15195 fb3afdfb0fb4dcbdd08513d556247c90 338 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 176 192 1.6E-29 T 15-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM378_15195 fb3afdfb0fb4dcbdd08513d556247c90 338 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 149 167 1.6E-29 T 15-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM378_15195 fb3afdfb0fb4dcbdd08513d556247c90 338 SMART SM00846 3 155 2.1E-79 T 15-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM378_09210 f95d628d2858a2a420ee09d6f15619a7 503 Pfam PF11924 Inverse autotransporter, beta-domain 82 360 1.8E-92 T 15-10-2018 IPR024519 Inverse autotransporter, beta-domain AM378_09210 f95d628d2858a2a420ee09d6f15619a7 503 Gene3D G3DSA:2.40.160.160 123 367 2.7E-76 T 15-10-2018 IPR038177 Inverse autotransporter, beta-domain superfamily AM378_14430 198f71873f72b0f08e59411acc0f8376 378 Pfam PF06725 3D domain 278 355 1.8E-24 T 15-10-2018 IPR010611 3D domain GO:0004553|GO:0009254|GO:0019867 AM378_14430 198f71873f72b0f08e59411acc0f8376 378 Gene3D G3DSA:2.40.240.50 125 263 6.1E-157 T 15-10-2018 AM378_14430 198f71873f72b0f08e59411acc0f8376 378 PIRSF PIRSF019422 1 365 1.5E-81 T 15-10-2018 IPR026044 Membrane-bound lytic murein transglycosylase A AM378_14430 198f71873f72b0f08e59411acc0f8376 378 SUPERFAMILY SSF50685 25 354 6.98E-109 T 15-10-2018 IPR036908 RlpA-like domain superfamily AM378_14430 198f71873f72b0f08e59411acc0f8376 378 SMART SM00925 125 258 8.9E-70 T 15-10-2018 IPR005300 Lytic transglycosylase MltA, domain B GO:0004553 AM378_14430 198f71873f72b0f08e59411acc0f8376 378 Pfam PF03562 MltA specific insert domain 95 258 8.4E-38 T 15-10-2018 IPR005300 Lytic transglycosylase MltA, domain B GO:0004553 AM378_14430 198f71873f72b0f08e59411acc0f8376 378 Gene3D G3DSA:2.40.40.10 54 354 6.1E-157 T 15-10-2018 IPR036908 RlpA-like domain superfamily AM378_17975 76c317d6cc5ee7e1e08d53f92621f37f 904 Hamap MF_01247 HTH-type transcriptional regulator MalT [malT]. 1 902 37.251 T 15-10-2018 IPR023768 Transcriptional regulator HTH-type, MalT AM378_17975 76c317d6cc5ee7e1e08d53f92621f37f 904 SUPERFAMILY SSF52540 7 226 2.27E-6 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_17975 76c317d6cc5ee7e1e08d53f92621f37f 904 Gene3D G3DSA:1.10.10.10 828 900 1.2E-18 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_17975 76c317d6cc5ee7e1e08d53f92621f37f 904 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 853 869 2.2E-10 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM378_17975 76c317d6cc5ee7e1e08d53f92621f37f 904 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 869 881 2.2E-10 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM378_17975 76c317d6cc5ee7e1e08d53f92621f37f 904 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 839 853 2.2E-10 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM378_17975 76c317d6cc5ee7e1e08d53f92621f37f 904 Gene3D G3DSA:1.25.40.10 441 811 3.8E-96 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AM378_17975 76c317d6cc5ee7e1e08d53f92621f37f 904 ProSitePatterns PS00622 LuxR-type HTH domain signature. 853 880 - T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM378_17975 76c317d6cc5ee7e1e08d53f92621f37f 904 SUPERFAMILY SSF48452 441 806 2.11E-158 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AM378_17975 76c317d6cc5ee7e1e08d53f92621f37f 904 SMART SM00421 836 893 7.9E-21 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM378_17975 76c317d6cc5ee7e1e08d53f92621f37f 904 SUPERFAMILY SSF46894 829 895 2.58E-17 T 15-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AM378_17975 76c317d6cc5ee7e1e08d53f92621f37f 904 Pfam PF00196 Bacterial regulatory proteins, luxR family 838 891 2.1E-19 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM378_11400 09a2c9fa1186205d8330201e02b62092 490 SUPERFAMILY SSF51735 6 282 4.72E-92 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily AM378_11400 09a2c9fa1186205d8330201e02b62092 490 Gene3D G3DSA:3.40.50.720 9 282 2.3E-102 T 15-10-2018 AM378_11400 09a2c9fa1186205d8330201e02b62092 490 SUPERFAMILY SSF48179 284 487 1.12E-66 T 15-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 AM378_11400 09a2c9fa1186205d8330201e02b62092 490 Pfam PF01232 Mannitol dehydrogenase Rossmann domain 26 188 8.5E-43 T 15-10-2018 IPR013131 Mannitol dehydrogenase, N-terminal GO:0016491|GO:0055114 AM378_11400 09a2c9fa1186205d8330201e02b62092 490 Pfam PF08125 Mannitol dehydrogenase C-terminal domain 218 461 1.9E-90 T 15-10-2018 IPR013118 Mannitol dehydrogenase, C-terminal GO:0016491|GO:0050662|GO:0055114 AM378_11400 09a2c9fa1186205d8330201e02b62092 490 PRINTS PR00084 Mannitol dehydrogenase signature 27 37 1.7E-18 T 15-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 AM378_11400 09a2c9fa1186205d8330201e02b62092 490 PRINTS PR00084 Mannitol dehydrogenase signature 218 231 1.7E-18 T 15-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 AM378_11400 09a2c9fa1186205d8330201e02b62092 490 PRINTS PR00084 Mannitol dehydrogenase signature 179 192 1.7E-18 T 15-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 AM378_11400 09a2c9fa1186205d8330201e02b62092 490 PRINTS PR00084 Mannitol dehydrogenase signature 249 264 1.7E-18 T 15-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 AM378_11400 09a2c9fa1186205d8330201e02b62092 490 Gene3D G3DSA:1.10.1040.10 283 489 2.4E-78 T 15-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AM378_06395 2f1a083da30f18e00a76a84b58710c2d 351 Gene3D G3DSA:3.60.70.12 21 350 5.8E-109 T 15-10-2018 IPR016117 ArgJ-like domain superfamily KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 AM378_06395 2f1a083da30f18e00a76a84b58710c2d 351 SUPERFAMILY SSF56266 29 349 3.4E-86 T 15-10-2018 IPR016117 ArgJ-like domain superfamily KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 AM378_06395 2f1a083da30f18e00a76a84b58710c2d 351 Pfam PF03576 Peptidase family S58 37 336 2.3E-97 T 15-10-2018 IPR005321 Peptidase S58, DmpA AM378_20855 96a61067474c2133d6e64c549ea73198 354 Gene3D G3DSA:2.130.10.10 32 353 3.6E-120 T 15-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 AM378_20855 96a61067474c2133d6e64c549ea73198 354 TIGRFAM TIGR02276 beta_rpt_yvtn: 40-residue YVTN family beta-propeller repeat 282 321 7.7E-8 T 15-10-2018 IPR011964 YVTN beta-propeller repeat AM378_20855 96a61067474c2133d6e64c549ea73198 354 SUPERFAMILY SSF51004 34 341 7.98E-44 T 15-10-2018 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain superfamily AM378_20855 96a61067474c2133d6e64c549ea73198 354 Pfam PF13360 PQQ-like domain 111 307 1.9E-5 T 15-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat AM378_00825 f037acc8f49b05082b99bff4e83c1005 482 SMART SM00495 435 481 2.0E-13 T 15-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 AM378_00825 f037acc8f49b05082b99bff4e83c1005 482 SUPERFAMILY SSF51445 21 317 1.05E-47 T 15-10-2018 IPR017853 Glycoside hydrolase superfamily AM378_00825 f037acc8f49b05082b99bff4e83c1005 482 Gene3D G3DSA:2.60.40.10 339 424 1.1E-18 T 15-10-2018 IPR013783 Immunoglobulin-like fold AM378_00825 f037acc8f49b05082b99bff4e83c1005 482 SUPERFAMILY SSF51055 437 480 2.49E-16 T 15-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 AM378_00825 f037acc8f49b05082b99bff4e83c1005 482 SMART SM00636 23 307 0.0041 T 15-10-2018 IPR011583 Chitinase II GO:0008061 AM378_00825 f037acc8f49b05082b99bff4e83c1005 482 SMART SM00060 340 413 1.1E-5 T 15-10-2018 IPR003961 Fibronectin type III GO:0005515 AM378_00825 f037acc8f49b05082b99bff4e83c1005 482 Gene3D G3DSA:2.10.10.20 437 480 8.5E-20 T 15-10-2018 AM378_00825 f037acc8f49b05082b99bff4e83c1005 482 Gene3D G3DSA:3.20.20.80 3 330 2.1E-90 T 15-10-2018 AM378_00825 f037acc8f49b05082b99bff4e83c1005 482 Pfam PF00704 Glycosyl hydrolases family 18 25 307 1.6E-29 T 15-10-2018 IPR001223 Glycoside hydrolase family 18, catalytic domain GO:0005975 AM378_00825 f037acc8f49b05082b99bff4e83c1005 482 SUPERFAMILY SSF49265 334 426 1.8E-14 T 15-10-2018 IPR036116 Fibronectin type III superfamily GO:0005515 AM378_00825 f037acc8f49b05082b99bff4e83c1005 482 ProSitePatterns PS01095 Chitinases family 18 active site. 131 139 - T 15-10-2018 IPR001579 Glycoside hydrolase, chitinase active site GO:0004553|GO:0005975 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 AM378_01590 eaaae0dfd8998132c0426b560beb9bdb 141 SMART SM00091 5 73 1.7E-5 T 15-10-2018 IPR000014 PAS domain AM378_01590 eaaae0dfd8998132c0426b560beb9bdb 141 SUPERFAMILY SSF55785 19 115 3.32E-28 T 15-10-2018 IPR035965 PAS domain superfamily AM378_01590 eaaae0dfd8998132c0426b560beb9bdb 141 Gene3D G3DSA:3.30.450.20 2 115 3.4E-28 T 15-10-2018 AM378_01590 eaaae0dfd8998132c0426b560beb9bdb 141 Pfam PF08447 PAS fold 30 114 8.9E-12 T 15-10-2018 IPR013655 PAS fold-3 GO:0005515 AM378_01590 eaaae0dfd8998132c0426b560beb9bdb 141 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 17 119 4.2E-14 T 15-10-2018 IPR000014 PAS domain AM378_01285 9cffed19dd2d5df3c1f32aee3cc29af5 272 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 244 256 1.2E-5 T 15-10-2018 AM378_01285 9cffed19dd2d5df3c1f32aee3cc29af5 272 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 221 240 1.2E-5 T 15-10-2018 AM378_01285 9cffed19dd2d5df3c1f32aee3cc29af5 272 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 7 21 1.2E-5 T 15-10-2018 AM378_01285 9cffed19dd2d5df3c1f32aee3cc29af5 272 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 5 267 1.5E-69 T 15-10-2018 IPR000150 Cof family GO:0016787 AM378_01285 9cffed19dd2d5df3c1f32aee3cc29af5 272 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 6 77 1.2E-11 T 15-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 AM378_01285 9cffed19dd2d5df3c1f32aee3cc29af5 272 ProSitePatterns PS01229 Hypothetical cof family signature 2. 221 243 - T 15-10-2018 AM378_01285 9cffed19dd2d5df3c1f32aee3cc29af5 272 Gene3D G3DSA:3.40.50.1000 5 267 1.0E-61 T 15-10-2018 IPR023214 HAD superfamily AM378_01285 9cffed19dd2d5df3c1f32aee3cc29af5 272 Pfam PF08282 haloacid dehalogenase-like hydrolase 6 267 7.8E-63 T 15-10-2018 AM378_01285 9cffed19dd2d5df3c1f32aee3cc29af5 272 SUPERFAMILY SSF56784 1 270 1.03E-66 T 15-10-2018 IPR036412 HAD-like superfamily AM378_01285 9cffed19dd2d5df3c1f32aee3cc29af5 272 Gene3D G3DSA:3.30.1240.10 84 196 1.0E-61 T 15-10-2018 AM378_05185 9ea79cf2425bf2457f7e7cb450d74c25 293 PRINTS PR01277 Nucleoside-specific channel-forming protein Tsx signature 150 175 3.7E-95 T 15-10-2018 IPR003055 Nucleoside-specific channel-forming protein Tsx GO:0005337|GO:0009279 AM378_05185 9ea79cf2425bf2457f7e7cb450d74c25 293 PRINTS PR01277 Nucleoside-specific channel-forming protein Tsx signature 27 49 3.7E-95 T 15-10-2018 IPR003055 Nucleoside-specific channel-forming protein Tsx GO:0005337|GO:0009279 AM378_05185 9ea79cf2425bf2457f7e7cb450d74c25 293 PRINTS PR01277 Nucleoside-specific channel-forming protein Tsx signature 54 78 3.7E-95 T 15-10-2018 IPR003055 Nucleoside-specific channel-forming protein Tsx GO:0005337|GO:0009279 AM378_05185 9ea79cf2425bf2457f7e7cb450d74c25 293 PRINTS PR01277 Nucleoside-specific channel-forming protein Tsx signature 89 110 3.7E-95 T 15-10-2018 IPR003055 Nucleoside-specific channel-forming protein Tsx GO:0005337|GO:0009279 AM378_05185 9ea79cf2425bf2457f7e7cb450d74c25 293 PRINTS PR01277 Nucleoside-specific channel-forming protein Tsx signature 241 260 3.7E-95 T 15-10-2018 IPR003055 Nucleoside-specific channel-forming protein Tsx GO:0005337|GO:0009279 AM378_05185 9ea79cf2425bf2457f7e7cb450d74c25 293 PRINTS PR01277 Nucleoside-specific channel-forming protein Tsx signature 115 135 3.7E-95 T 15-10-2018 IPR003055 Nucleoside-specific channel-forming protein Tsx GO:0005337|GO:0009279 AM378_05185 9ea79cf2425bf2457f7e7cb450d74c25 293 PRINTS PR01277 Nucleoside-specific channel-forming protein Tsx signature 182 205 3.7E-95 T 15-10-2018 IPR003055 Nucleoside-specific channel-forming protein Tsx GO:0005337|GO:0009279 AM378_05185 9ea79cf2425bf2457f7e7cb450d74c25 293 SUPERFAMILY SSF111364 31 293 3.14E-87 T 15-10-2018 IPR036777 Nucleoside-specific channel-forming protein, Tsx-like superfamily GO:0009279 AM378_05185 9ea79cf2425bf2457f7e7cb450d74c25 293 Pfam PF03502 Nucleoside-specific channel-forming protein, Tsx 31 293 3.8E-82 T 15-10-2018 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like GO:0009279 AM378_05185 9ea79cf2425bf2457f7e7cb450d74c25 293 Gene3D G3DSA:2.40.230.20 22 293 7.3E-117 T 15-10-2018 IPR036777 Nucleoside-specific channel-forming protein, Tsx-like superfamily GO:0009279 AM378_09585 9dc945e61ce608ca98c53b2fa2dc93df 305 SUPERFAMILY SSF46785 4 112 4.47E-24 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM378_09585 9dc945e61ce608ca98c53b2fa2dc93df 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 63 1.6E-19 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_09585 9dc945e61ce608ca98c53b2fa2dc93df 305 SUPERFAMILY SSF53850 90 297 3.08E-40 T 15-10-2018 AM378_09585 9dc945e61ce608ca98c53b2fa2dc93df 305 Gene3D G3DSA:1.10.10.10 1 86 6.8E-28 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_09585 9dc945e61ce608ca98c53b2fa2dc93df 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 3.3E-7 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_09585 9dc945e61ce608ca98c53b2fa2dc93df 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 3.3E-7 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_09585 9dc945e61ce608ca98c53b2fa2dc93df 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 3.3E-7 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_09585 9dc945e61ce608ca98c53b2fa2dc93df 305 Pfam PF03466 LysR substrate binding domain 90 294 8.3E-39 T 15-10-2018 IPR005119 LysR, substrate-binding AM378_09585 9dc945e61ce608ca98c53b2fa2dc93df 305 Gene3D G3DSA:3.40.190.290 92 294 2.1E-59 T 15-10-2018 AM378_15755 84ec7a526a898c98e680a039e1250aaa 433 Gene3D G3DSA:1.10.4160.10 9 432 4.2E-48 T 15-10-2018 IPR038271 Purine-cytosine permease superfamily AM378_15755 84ec7a526a898c98e680a039e1250aaa 433 Pfam PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin 12 396 1.2E-22 T 15-10-2018 IPR001248 Purine-cytosine permease GO:0016020|GO:0022857|GO:0055085 AM378_08880 15420c34e0ffa34d541b6179f6eaa6ea 266 Pfam PF03609 PTS system sorbose-specific iic component 6 237 4.9E-74 T 15-10-2018 IPR004700 Phosphotransferase system, mannose/fructose/sorbose family, IIC subunit GO:0009401|GO:0016021 AM378_08880 15420c34e0ffa34d541b6179f6eaa6ea 266 TIGRFAM TIGR00822 EII-Sor: PTS system, mannose/fructose/sorbose family, IIC component 1 266 1.8E-120 T 15-10-2018 IPR004700 Phosphotransferase system, mannose/fructose/sorbose family, IIC subunit GO:0009401|GO:0016021 AM378_01675 32d88bb9c4bbfffe4dde2227a25ea508 241 Gene3D G3DSA:3.30.428.30 16 239 9.3E-84 T 15-10-2018 IPR038433 CDP-diacylglycerol pyrophosphatase superfamily KEGG: 00564+3.6.1.26 AM378_01675 32d88bb9c4bbfffe4dde2227a25ea508 241 Pfam PF02611 CDP-diacylglycerol pyrophosphatase 20 238 7.9E-84 T 15-10-2018 IPR003763 CDP-diacylglycerol pyrophosphatase GO:0008654|GO:0008715|GO:0016020 KEGG: 00564+3.6.1.26 AM378_01675 32d88bb9c4bbfffe4dde2227a25ea508 241 SUPERFAMILY SSF54197 20 239 6.23E-82 T 15-10-2018 IPR036265 HIT-like superfamily AM378_01675 32d88bb9c4bbfffe4dde2227a25ea508 241 PIRSF PIRSF001273 8 241 8.1E-75 T 15-10-2018 IPR003763 CDP-diacylglycerol pyrophosphatase GO:0008654|GO:0008715|GO:0016020 KEGG: 00564+3.6.1.26 AM378_09825 6b5fc552735098b34b5d5bb913889b19 193 Pfam PF05280 Flagellar transcriptional activator (FlhC) 1 173 2.7E-84 T 15-10-2018 IPR007944 Flagellar transcriptional activator FlhC GO:0003677|GO:0045893|GO:1902208 AM378_09825 6b5fc552735098b34b5d5bb913889b19 193 ProDom PD016592 ACTIVATOR TRANSCRIPTIONAL FLAGELLUM FLAGELLAR TRANSCRIPTION FLHC RNA DNA-BINDING REGULATION DNA-DIRECTED 1 193 5.0E-111 T 15-10-2018 IPR007944 Flagellar transcriptional activator FlhC GO:0003677|GO:0045893|GO:1902208 AM378_09825 6b5fc552735098b34b5d5bb913889b19 193 Hamap MF_01891 Flagellar transcriptional regulator FlhC [flhC]. 1 187 46.747 T 15-10-2018 IPR007944 Flagellar transcriptional activator FlhC GO:0003677|GO:0045893|GO:1902208 AM378_09825 6b5fc552735098b34b5d5bb913889b19 193 PIRSF PIRSF003159 1 182 6.1E-91 T 15-10-2018 IPR007944 Flagellar transcriptional activator FlhC GO:0003677|GO:0045893|GO:1902208 AM378_09825 6b5fc552735098b34b5d5bb913889b19 193 SUPERFAMILY SSF160930 5 161 1.44E-65 T 15-10-2018 AM378_11555 913ecb7ac93ea2dfa2ee7e333499e8c3 80 Gene3D G3DSA:3.30.910.10 1 79 1.9E-17 T 15-10-2018 IPR036687 DinI-like superfamily AM378_11555 913ecb7ac93ea2dfa2ee7e333499e8c3 80 Pfam PF06183 DinI-like family 17 76 5.3E-23 T 15-10-2018 IPR010391 DNA damage-inducible protein DinI-like AM378_11555 913ecb7ac93ea2dfa2ee7e333499e8c3 80 SUPERFAMILY SSF54857 1 77 1.7E-24 T 15-10-2018 IPR036687 DinI-like superfamily AM378_23290 b3c81f78b062dd88a665ba6e89f1eee0 171 Pfam PF02664 S-Ribosylhomocysteinase (LuxS) 4 151 1.1E-61 T 15-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 AM378_23290 b3c81f78b062dd88a665ba6e89f1eee0 171 Hamap MF_00091 S-ribosylhomocysteine lyase [luxS]. 1 159 35.389 T 15-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 AM378_23290 b3c81f78b062dd88a665ba6e89f1eee0 171 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 77 95 4.9E-49 T 15-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 AM378_23290 b3c81f78b062dd88a665ba6e89f1eee0 171 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 49 67 4.9E-49 T 15-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 AM378_23290 b3c81f78b062dd88a665ba6e89f1eee0 171 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 28 46 4.9E-49 T 15-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 AM378_23290 b3c81f78b062dd88a665ba6e89f1eee0 171 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 121 140 4.9E-49 T 15-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 AM378_23290 b3c81f78b062dd88a665ba6e89f1eee0 171 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 5 23 4.9E-49 T 15-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 AM378_23290 b3c81f78b062dd88a665ba6e89f1eee0 171 ProDom PD013172 LYASE SYNTHESIS LUXS AUTOINDUCER-2 PRODUCTION AUTOINDUCER S-RIBOSYLHOMOCYSTEINE AI-2 QUORUM SENSING 9 148 3.0E-80 T 15-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 AM378_23290 b3c81f78b062dd88a665ba6e89f1eee0 171 SUPERFAMILY SSF63411 4 162 1.28E-66 T 15-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AM378_23290 b3c81f78b062dd88a665ba6e89f1eee0 171 PIRSF PIRSF006160 1 162 3.5E-65 T 15-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 AM378_23290 b3c81f78b062dd88a665ba6e89f1eee0 171 Gene3D G3DSA:3.30.1360.80 1 171 3.7E-72 T 15-10-2018 IPR037005 S-ribosylhomocysteinase (LuxS) superfamily GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 AM378_05510 29db0ceaf213ce79aa98264fea92b760 183 Gene3D G3DSA:3.30.110.10 84 183 5.8E-37 T 15-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 AM378_05510 29db0ceaf213ce79aa98264fea92b760 183 Pfam PF00707 Translation initiation factor IF-3, C-terminal domain 91 180 7.7E-36 T 15-10-2018 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 Reactome: R-HSA-5368286 AM378_05510 29db0ceaf213ce79aa98264fea92b760 183 Gene3D G3DSA:3.10.20.80 10 83 5.2E-33 T 15-10-2018 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily GO:0003743|GO:0006413 Reactome: R-HSA-5368286 AM378_05510 29db0ceaf213ce79aa98264fea92b760 183 Pfam PF05198 Translation initiation factor IF-3, N-terminal domain 15 84 1.2E-31 T 15-10-2018 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 Reactome: R-HSA-5368286 AM378_05510 29db0ceaf213ce79aa98264fea92b760 183 TIGRFAM TIGR00168 infC: translation initiation factor IF-3 15 182 2.3E-74 T 15-10-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 AM378_05510 29db0ceaf213ce79aa98264fea92b760 183 SUPERFAMILY SSF55200 90 182 2.49E-32 T 15-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 AM378_05510 29db0ceaf213ce79aa98264fea92b760 183 ProSitePatterns PS00938 Initiation factor 3 signature. 66 79 - T 15-10-2018 IPR019813 Translation initiation factor 3, conserved site GO:0003743|GO:0006413 AM378_05510 29db0ceaf213ce79aa98264fea92b760 183 SUPERFAMILY SSF54364 13 86 2.48E-29 T 15-10-2018 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily GO:0003743|GO:0006413 Reactome: R-HSA-5368286 AM378_05510 29db0ceaf213ce79aa98264fea92b760 183 Hamap MF_00080 Translation initiation factor IF-3 [infC]. 9 182 30.596 T 15-10-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 AM378_04965 c3d924281427fcd187998ec65c551ea7 485 Gene3D G3DSA:3.30.565.10 334 484 1.3E-32 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AM378_04965 c3d924281427fcd187998ec65c551ea7 485 SMART SM00387 373 479 1.1E-22 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AM378_04965 c3d924281427fcd187998ec65c551ea7 485 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 375 475 2.5E-12 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AM378_04965 c3d924281427fcd187998ec65c551ea7 485 SUPERFAMILY SSF47384 247 329 1.0E-5 T 15-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AM378_04965 c3d924281427fcd187998ec65c551ea7 485 SMART SM00388 264 328 0.0041 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM378_04965 c3d924281427fcd187998ec65c551ea7 485 Gene3D G3DSA:3.30.450.140 42 192 1.5E-63 T 15-10-2018 IPR038429 PhoQ Sensor superfamily AM378_04965 c3d924281427fcd187998ec65c551ea7 485 PRINTS PR00344 Bacterial sensor protein C-terminal signature 439 457 8.4E-8 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM378_04965 c3d924281427fcd187998ec65c551ea7 485 PRINTS PR00344 Bacterial sensor protein C-terminal signature 408 422 8.4E-8 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM378_04965 c3d924281427fcd187998ec65c551ea7 485 SUPERFAMILY SSF55874 320 477 2.62E-30 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AM378_04965 c3d924281427fcd187998ec65c551ea7 485 Pfam PF08918 PhoQ Sensor 8 185 1.6E-90 T 15-10-2018 IPR015014 PhoQ Sensor GO:0000160|GO:0004673|GO:0005524|GO:0016020|GO:0018106|GO:0046872 AM378_04965 c3d924281427fcd187998ec65c551ea7 485 Gene3D G3DSA:1.10.287.130 214 321 1.0E-7 T 15-10-2018 AM378_06605 37a3ef16ca4a42baccc8d8328b56aa2d 149 Pfam PF01047 MarR family 33 91 3.5E-9 T 15-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AM378_06605 37a3ef16ca4a42baccc8d8328b56aa2d 149 Gene3D G3DSA:1.10.10.10 32 95 5.9E-18 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_06605 37a3ef16ca4a42baccc8d8328b56aa2d 149 SUPERFAMILY SSF46785 10 142 5.46E-23 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM378_06605 37a3ef16ca4a42baccc8d8328b56aa2d 149 SMART SM00347 25 127 1.3E-16 T 15-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AM378_06605 37a3ef16ca4a42baccc8d8328b56aa2d 149 Gene3D G3DSA:1.10.287.100 97 143 3.1E-13 T 15-10-2018 AM378_19910 861c1819fef7573bc2176aa1ef52e960 67 Pfam PF11120 Cellulose biosynthesis protein BcsF 3 60 3.2E-30 T 15-10-2018 IPR019995 Cellulose biosynthesis, BcsF/YhjT AM378_19910 861c1819fef7573bc2176aa1ef52e960 67 ProDom PD053231 YHJT MEMBRANE INNER BCSF 2 63 1.0E-6 T 15-10-2018 IPR019995 Cellulose biosynthesis, BcsF/YhjT AM378_19910 861c1819fef7573bc2176aa1ef52e960 67 TIGRFAM TIGR03493 cellullose_BcsF: celllulose biosynthesis operon protein BcsF/YhjT 3 60 2.3E-24 T 15-10-2018 IPR019995 Cellulose biosynthesis, BcsF/YhjT AM378_20145 ad08054855d893e83d602c09769dccbd 720 Pfam PF00580 UvrD/REP helicase N-terminal domain 10 271 1.2E-76 T 15-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 AM378_20145 ad08054855d893e83d602c09769dccbd 720 Gene3D G3DSA:3.40.50.300 281 636 1.2E-139 T 15-10-2018 AM378_20145 ad08054855d893e83d602c09769dccbd 720 SUPERFAMILY SSF52540 4 642 2.66E-184 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_20145 ad08054855d893e83d602c09769dccbd 720 TIGRFAM TIGR01075 uvrD: DNA helicase II 6 718 0.0 T 15-10-2018 IPR005753 DNA helicase, ATP-dependent, UvrD type GO:0004003|GO:0005737|GO:0006268 AM378_20145 ad08054855d893e83d602c09769dccbd 720 Gene3D G3DSA:1.10.486.10 382 538 1.2E-139 T 15-10-2018 AM378_20145 ad08054855d893e83d602c09769dccbd 720 Gene3D G3DSA:1.10.10.160 114 187 7.6E-106 T 15-10-2018 IPR013986 DExx box DNA helicase domain superfamily AM378_20145 ad08054855d893e83d602c09769dccbd 720 Pfam PF13361 UvrD-like helicase C-terminal domain 277 616 3.5E-76 T 15-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 AM378_20145 ad08054855d893e83d602c09769dccbd 720 Gene3D G3DSA:3.40.50.300 10 274 7.6E-106 T 15-10-2018 AM378_12580 8a894d459e79dc075ac690e432b8f198 252 Pfam PF07264 Etoposide-induced protein 2.4 (EI24) 16 232 5.0E-45 T 15-10-2018 AM378_12580 8a894d459e79dc075ac690e432b8f198 252 Hamap MF_00468 Sulfate transporter CysZ [cysZ]. 10 250 29.092 T 15-10-2018 IPR022985 Sulfate transporter CysZ GO:0000103|GO:0005887|GO:0015116 AM378_01865 6b382b16a9dcc02ad20480a8b3d1ab9e 287 SUPERFAMILY SSF161098 89 273 1.83E-31 T 15-10-2018 IPR035906 MetI-like superfamily AM378_01865 6b382b16a9dcc02ad20480a8b3d1ab9e 287 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 111 271 8.3E-15 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AM378_01865 6b382b16a9dcc02ad20480a8b3d1ab9e 287 TIGRFAM TIGR01097 PhnE: phosphonate ABC transporter, permease protein PhnE 17 282 2.3E-83 T 15-10-2018 IPR005769 ABC transporter, permease PhnE/PtxC GO:0005887|GO:0015604|GO:0015716 AM378_01865 6b382b16a9dcc02ad20480a8b3d1ab9e 287 Gene3D G3DSA:1.10.3720.10 85 283 4.3E-31 T 15-10-2018 IPR035906 MetI-like superfamily AM378_00530 213f8ed5c0d2affbd86c255a747f39eb 164 Gene3D G3DSA:2.40.100.10 1 164 2.0E-70 T 15-10-2018 IPR029000 Cyclophilin-like domain superfamily AM378_00530 213f8ed5c0d2affbd86c255a747f39eb 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 41 53 5.9E-12 T 15-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 AM378_00530 213f8ed5c0d2affbd86c255a747f39eb 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 15 30 5.9E-12 T 15-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 AM378_00530 213f8ed5c0d2affbd86c255a747f39eb 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 118 133 5.9E-12 T 15-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 AM378_00530 213f8ed5c0d2affbd86c255a747f39eb 164 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 36 53 - T 15-10-2018 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 AM378_00530 213f8ed5c0d2affbd86c255a747f39eb 164 PIRSF PIRSF001467 1 164 3.4E-28 T 15-10-2018 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755 AM378_00530 213f8ed5c0d2affbd86c255a747f39eb 164 SUPERFAMILY SSF50891 1 162 1.34E-59 T 15-10-2018 IPR029000 Cyclophilin-like domain superfamily AM378_00530 213f8ed5c0d2affbd86c255a747f39eb 164 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 1 161 6.0E-47 T 15-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 AM378_12205 f47916f186c7851f80c98dc523e1118f 245 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 121 141 2.8E-64 T 15-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 AM378_12205 f47916f186c7851f80c98dc523e1118f 245 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 156 182 2.8E-64 T 15-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 AM378_12205 f47916f186c7851f80c98dc523e1118f 245 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 62 82 2.8E-64 T 15-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 AM378_12205 f47916f186c7851f80c98dc523e1118f 245 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 100 120 2.8E-64 T 15-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 AM378_12205 f47916f186c7851f80c98dc523e1118f 245 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 45 62 2.8E-64 T 15-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 AM378_12205 f47916f186c7851f80c98dc523e1118f 245 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 201 225 2.8E-64 T 15-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 AM378_12205 f47916f186c7851f80c98dc523e1118f 245 TIGRFAM TIGR01191 ccmC: heme exporter protein CcmC 45 225 4.0E-85 T 15-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 AM378_12205 f47916f186c7851f80c98dc523e1118f 245 Pfam PF01578 Cytochrome C assembly protein 14 184 2.7E-33 T 15-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 AM378_19820 ca4bcdfd8f67dd9ddbe64e67a7fd1ce5 199 SUPERFAMILY SSF109604 4 152 5.34E-37 T 15-10-2018 AM378_19820 ca4bcdfd8f67dd9ddbe64e67a7fd1ce5 199 Gene3D G3DSA:1.10.3210.10 1 172 4.6E-40 T 15-10-2018 AM378_19820 ca4bcdfd8f67dd9ddbe64e67a7fd1ce5 199 SMART SM00471 27 136 2.4E-9 T 15-10-2018 IPR003607 HD/PDEase domain AM378_19820 ca4bcdfd8f67dd9ddbe64e67a7fd1ce5 199 Pfam PF13328 HD domain 9 131 8.5E-19 T 15-10-2018 IPR003607 HD/PDEase domain AM378_02795 d867d120f9dc5ae5bdd5eaa7277388c0 441 SUPERFAMILY SSF51445 36 346 4.35E-57 T 15-10-2018 IPR017853 Glycoside hydrolase superfamily AM378_02795 d867d120f9dc5ae5bdd5eaa7277388c0 441 Pfam PF00150 Cellulase (glycosyl hydrolase family 5) 41 296 3.5E-11 T 15-10-2018 IPR001547 Glycoside hydrolase, family 5 GO:0004553|GO:0005975 AM378_02795 d867d120f9dc5ae5bdd5eaa7277388c0 441 Gene3D G3DSA:3.20.20.80 45 347 7.0E-51 T 15-10-2018 AM378_17365 fc03f366ed60472b52c3eebb25f22007 169 Pfam PF01327 Polypeptide deformylase 4 152 2.9E-49 T 15-10-2018 IPR023635 Peptide deformylase AM378_17365 fc03f366ed60472b52c3eebb25f22007 169 Gene3D G3DSA:3.90.45.10 2 169 1.4E-66 T 15-10-2018 IPR036821 Peptide deformylase superfamily AM378_17365 fc03f366ed60472b52c3eebb25f22007 169 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 4 160 6.2E-65 T 15-10-2018 IPR023635 Peptide deformylase AM378_17365 fc03f366ed60472b52c3eebb25f22007 169 PIRSF PIRSF004749 1 168 1.7E-54 T 15-10-2018 IPR023635 Peptide deformylase AM378_17365 fc03f366ed60472b52c3eebb25f22007 169 PRINTS PR01576 Peptide deformylase signature 89 100 2.1E-37 T 15-10-2018 IPR023635 Peptide deformylase AM378_17365 fc03f366ed60472b52c3eebb25f22007 169 PRINTS PR01576 Peptide deformylase signature 120 149 2.1E-37 T 15-10-2018 IPR023635 Peptide deformylase AM378_17365 fc03f366ed60472b52c3eebb25f22007 169 PRINTS PR01576 Peptide deformylase signature 33 62 2.1E-37 T 15-10-2018 IPR023635 Peptide deformylase AM378_17365 fc03f366ed60472b52c3eebb25f22007 169 PRINTS PR01576 Peptide deformylase signature 101 119 2.1E-37 T 15-10-2018 IPR023635 Peptide deformylase AM378_17365 fc03f366ed60472b52c3eebb25f22007 169 SUPERFAMILY SSF56420 3 164 6.41E-61 T 15-10-2018 IPR036821 Peptide deformylase superfamily AM378_17365 fc03f366ed60472b52c3eebb25f22007 169 Hamap MF_00163 Peptide deformylase [def]. 2 162 31.283 T 15-10-2018 IPR023635 Peptide deformylase AM378_17960 97b22d44e58680b3dd92d45aad3ffbdc 191 Gene3D G3DSA:2.60.300.12 1 98 2.8E-13 T 15-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 AM378_17960 97b22d44e58680b3dd92d45aad3ffbdc 191 Pfam PF01521 Iron-sulphur cluster biosynthesis 2 98 2.2E-13 T 15-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 AM378_17960 97b22d44e58680b3dd92d45aad3ffbdc 191 Hamap MF_01637 Fe/S biogenesis protein NfuA [nfuA]. 1 191 46.37 T 15-10-2018 IPR017726 Fe/S biogenesis protein NfuA GO:0016226|GO:0051539|GO:0051604 AM378_17960 97b22d44e58680b3dd92d45aad3ffbdc 191 SUPERFAMILY SSF117916 95 184 5.45E-25 T 15-10-2018 IPR034904 Fe-S cluster assembly domain superfamily AM378_17960 97b22d44e58680b3dd92d45aad3ffbdc 191 Gene3D G3DSA:3.30.300.130 101 188 7.8E-22 T 15-10-2018 IPR034904 Fe-S cluster assembly domain superfamily AM378_17960 97b22d44e58680b3dd92d45aad3ffbdc 191 ProDom PD002830 NIFU NIFU NITROGEN-FIXING C-TERMINAL FIXATION NITROGEN NIFU-LIKE DOMAIN CLUSTER HESB/YADR/YFHF:NITROGEN-FIXING 119 177 3.0E-26 T 15-10-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 AM378_17960 97b22d44e58680b3dd92d45aad3ffbdc 191 Pfam PF01106 NifU-like domain 111 177 8.0E-21 T 15-10-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 AM378_17960 97b22d44e58680b3dd92d45aad3ffbdc 191 TIGRFAM TIGR03341 YhgI_GntY: IscR-regulated protein YhgI 2 191 1.2E-102 T 15-10-2018 IPR017726 Fe/S biogenesis protein NfuA GO:0016226|GO:0051539|GO:0051604 AM378_17960 97b22d44e58680b3dd92d45aad3ffbdc 191 SUPERFAMILY SSF89360 1 97 2.55E-21 T 15-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 AM378_24325 51010739c8d9ec7274ed2cdf4b9ec450 204 TIGRFAM TIGR02842 CyoC: cytochrome o ubiquinol oxidase, subunit III 25 204 1.4E-88 T 15-10-2018 IPR014206 Cytochrome o ubiquinol oxidase, subunit III GO:0005886|GO:0008827|GO:0019646 AM378_24325 51010739c8d9ec7274ed2cdf4b9ec450 204 Pfam PF00510 Cytochrome c oxidase subunit III 17 202 3.3E-16 T 15-10-2018 IPR000298 Cytochrome c oxidase subunit III-like GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM378_24325 51010739c8d9ec7274ed2cdf4b9ec450 204 SUPERFAMILY SSF81452 12 202 2.22E-60 T 15-10-2018 IPR035973 Cytochrome c oxidase subunit III-like superfamily GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM378_24325 51010739c8d9ec7274ed2cdf4b9ec450 204 Gene3D G3DSA:1.20.120.80 19 204 9.1E-60 T 15-10-2018 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM378_23440 26a7b50ad9abc515f78a7b56422dced0 461 SUPERFAMILY SSF54106 352 396 2.62E-10 T 15-10-2018 AM378_23440 26a7b50ad9abc515f78a7b56422dced0 461 Gene3D G3DSA:3.10.350.10 350 401 4.4E-16 T 15-10-2018 IPR036779 LysM domain superfamily AM378_23440 26a7b50ad9abc515f78a7b56422dced0 461 SMART SM00257 407 452 2.3E-9 T 15-10-2018 IPR018392 LysM domain AM378_23440 26a7b50ad9abc515f78a7b56422dced0 461 SMART SM00257 353 397 2.1E-13 T 15-10-2018 IPR018392 LysM domain AM378_23440 26a7b50ad9abc515f78a7b56422dced0 461 Gene3D G3DSA:3.10.350.10 404 453 4.4E-14 T 15-10-2018 IPR036779 LysM domain superfamily AM378_23440 26a7b50ad9abc515f78a7b56422dced0 461 Pfam PF01476 LysM domain 354 396 7.8E-13 T 15-10-2018 IPR018392 LysM domain AM378_23440 26a7b50ad9abc515f78a7b56422dced0 461 Pfam PF01476 LysM domain 408 451 3.2E-9 T 15-10-2018 IPR018392 LysM domain AM378_23440 26a7b50ad9abc515f78a7b56422dced0 461 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 130 158 - T 15-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 AM378_23440 26a7b50ad9abc515f78a7b56422dced0 461 Gene3D G3DSA:1.10.530.10 106 265 1.1E-31 T 15-10-2018 AM378_23440 26a7b50ad9abc515f78a7b56422dced0 461 Pfam PF01464 Transglycosylase SLT domain 112 223 2.7E-28 T 15-10-2018 IPR008258 Transglycosylase SLT domain 1 AM378_23440 26a7b50ad9abc515f78a7b56422dced0 461 SUPERFAMILY SSF53955 108 260 9.85E-41 T 15-10-2018 IPR023346 Lysozyme-like domain superfamily AM378_23440 26a7b50ad9abc515f78a7b56422dced0 461 SUPERFAMILY SSF54106 406 452 6.02E-10 T 15-10-2018 AM378_19315 e2ffa0c77907f9e91e1b6019bb26eb6b 457 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 403 431 - T 15-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 AM378_19315 e2ffa0c77907f9e91e1b6019bb26eb6b 457 Hamap MF_01631 Bifunctional protein GlmU [glmU]. 5 452 43.293 T 15-10-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|MetaCyc: PWY-5514 AM378_19315 e2ffa0c77907f9e91e1b6019bb26eb6b 457 SUPERFAMILY SSF53448 6 252 5.84E-68 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AM378_19315 e2ffa0c77907f9e91e1b6019bb26eb6b 457 TIGRFAM TIGR01173 glmU: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase 6 455 6.7E-204 T 15-10-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|MetaCyc: PWY-5514 AM378_19315 e2ffa0c77907f9e91e1b6019bb26eb6b 457 Gene3D G3DSA:3.90.550.10 1 227 2.3E-73 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AM378_19315 e2ffa0c77907f9e91e1b6019bb26eb6b 457 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 318 350 0.0021 T 15-10-2018 IPR001451 Hexapeptide repeat AM378_19315 e2ffa0c77907f9e91e1b6019bb26eb6b 457 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 395 429 1.1E-6 T 15-10-2018 IPR001451 Hexapeptide repeat AM378_19315 e2ffa0c77907f9e91e1b6019bb26eb6b 457 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 267 300 6.4E-7 T 15-10-2018 IPR001451 Hexapeptide repeat AM378_19315 e2ffa0c77907f9e91e1b6019bb26eb6b 457 Pfam PF12804 MobA-like NTP transferase domain 8 123 8.1E-22 T 15-10-2018 IPR025877 MobA-like NTP transferase AM378_19315 e2ffa0c77907f9e91e1b6019bb26eb6b 457 Gene3D G3DSA:2.160.10.10 228 456 2.1E-71 T 15-10-2018 AM378_19315 e2ffa0c77907f9e91e1b6019bb26eb6b 457 SUPERFAMILY SSF51161 255 437 2.81E-52 T 15-10-2018 IPR011004 Trimeric LpxA-like superfamily AM378_11105 8385db44c3764f8dbca146aca2405eb2 445 Pfam PF13440 Polysaccharide biosynthesis protein 43 346 1.4E-8 T 15-10-2018 AM378_18525 730ea515882e5884a69d8b7afd0048b1 308 ProSitePatterns PS00770 Aminotransferases class-IV signature. 193 222 - T 15-10-2018 IPR018300 Aminotransferase, class IV, conserved site GO:0003824 Reactome: R-HSA-70895 AM378_18525 730ea515882e5884a69d8b7afd0048b1 308 Gene3D G3DSA:3.30.470.10 9 126 8.6E-112 T 15-10-2018 AM378_18525 730ea515882e5884a69d8b7afd0048b1 308 Pfam PF01063 Amino-transferase class IV 35 267 1.4E-49 T 15-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 AM378_18525 730ea515882e5884a69d8b7afd0048b1 308 SUPERFAMILY SSF56752 6 306 6.41E-105 T 15-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 AM378_18525 730ea515882e5884a69d8b7afd0048b1 308 TIGRFAM TIGR01122 ilvE_I: branched-chain amino acid aminotransferase 9 306 1.8E-144 T 15-10-2018 IPR005785 Branched-chain amino acid aminotransferase I GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|MetaCyc: PWY-7767 AM378_18525 730ea515882e5884a69d8b7afd0048b1 308 Gene3D G3DSA:3.20.10.10 137 288 8.6E-112 T 15-10-2018 AM378_08975 7897e0ae197d6b767ade788be28fd2fa 128 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 61 103 - T 15-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AM378_08975 7897e0ae197d6b767ade788be28fd2fa 128 SUPERFAMILY SSF46689 10 58 8.69E-8 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AM378_08975 7897e0ae197d6b767ade788be28fd2fa 128 SUPERFAMILY SSF46689 60 110 1.52E-13 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AM378_08975 7897e0ae197d6b767ade788be28fd2fa 128 SMART SM00342 24 107 4.8E-27 T 15-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM378_08975 7897e0ae197d6b767ade788be28fd2fa 128 Gene3D G3DSA:1.10.10.60 3 60 2.1E-19 T 15-10-2018 AM378_08975 7897e0ae197d6b767ade788be28fd2fa 128 Gene3D G3DSA:1.10.10.60 61 116 2.4E-15 T 15-10-2018 AM378_08975 7897e0ae197d6b767ade788be28fd2fa 128 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 76 91 9.4E-7 T 15-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM378_08975 7897e0ae197d6b767ade788be28fd2fa 128 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 91 107 9.4E-7 T 15-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM378_08975 7897e0ae197d6b767ade788be28fd2fa 128 Pfam PF12833 Helix-turn-helix domain 30 108 4.4E-22 T 15-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM378_05160 9cc97796b78721ecf7da51301a9c3e31 472 Gene3D G3DSA:3.30.590.10 136 471 2.0E-97 T 15-10-2018 AM378_05160 9cc97796b78721ecf7da51301a9c3e31 472 SUPERFAMILY SSF54368 38 132 5.49E-9 T 15-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AM378_05160 9cc97796b78721ecf7da51301a9c3e31 472 SMART SM01230 133 390 5.8E-102 T 15-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AM378_05160 9cc97796b78721ecf7da51301a9c3e31 472 Pfam PF00120 Glutamine synthetase, catalytic domain 134 467 5.0E-104 T 15-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AM378_05160 9cc97796b78721ecf7da51301a9c3e31 472 SUPERFAMILY SSF55931 134 469 9.42E-101 T 15-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 AM378_05160 9cc97796b78721ecf7da51301a9c3e31 472 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 271 286 - T 15-10-2018 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 AM378_03890 b5356dafc145927b7767fd52d452fabc 307 Pfam PF00892 EamA-like transporter family 21 147 3.0E-13 T 15-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AM378_03890 b5356dafc145927b7767fd52d452fabc 307 Pfam PF00892 EamA-like transporter family 159 289 2.7E-14 T 15-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AM378_03890 b5356dafc145927b7767fd52d452fabc 307 SUPERFAMILY SSF103481 52 151 1.83E-12 T 15-10-2018 AM378_03890 b5356dafc145927b7767fd52d452fabc 307 SUPERFAMILY SSF103481 199 292 1.57E-11 T 15-10-2018 AM378_16570 c2a8b4661d2da19e1949613f46707601 375 Hamap MF_01919 Cell division protein ZapE [zapE]. 4 375 53.853 T 15-10-2018 IPR030870 Cell division protein ZapE GO:0016887|GO:0051301 AM378_16570 c2a8b4661d2da19e1949613f46707601 375 SUPERFAMILY SSF52540 70 193 7.68E-13 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_16570 c2a8b4661d2da19e1949613f46707601 375 Pfam PF03969 AFG1-like ATPase 5 370 1.7E-149 T 15-10-2018 IPR005654 ATPase, AFG1-like GO:0005524 AM378_16570 c2a8b4661d2da19e1949613f46707601 375 Gene3D G3DSA:3.40.50.300 21 203 1.5E-19 T 15-10-2018 AM378_04945 9bbfa7bb8d308238018e2c364df87d75 294 Pfam PF06958 S-type Pyocin 1 137 2.7E-30 T 15-10-2018 IPR016128 Pyosin/cloacin translocation domain GO:0009405 AM378_04945 9bbfa7bb8d308238018e2c364df87d75 294 SUPERFAMILY SSF69369 3 175 9.94E-29 T 15-10-2018 IPR036302 Pyosin/cloacin translocation domain superfamily GO:0009405 AM378_20945 60b9681aab95c96a572dd3b9fa58808e 177 PRINTS PR01171 Bacterial lipocalin signature 69 78 1.6E-42 T 15-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 AM378_20945 60b9681aab95c96a572dd3b9fa58808e 177 PRINTS PR01171 Bacterial lipocalin signature 120 128 1.6E-42 T 15-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 AM378_20945 60b9681aab95c96a572dd3b9fa58808e 177 PRINTS PR01171 Bacterial lipocalin signature 103 117 1.6E-42 T 15-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 AM378_20945 60b9681aab95c96a572dd3b9fa58808e 177 PRINTS PR01171 Bacterial lipocalin signature 162 172 1.6E-42 T 15-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 AM378_20945 60b9681aab95c96a572dd3b9fa58808e 177 PRINTS PR01171 Bacterial lipocalin signature 33 47 1.6E-42 T 15-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 AM378_20945 60b9681aab95c96a572dd3b9fa58808e 177 PRINTS PR01171 Bacterial lipocalin signature 135 146 1.6E-42 T 15-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 AM378_20945 60b9681aab95c96a572dd3b9fa58808e 177 PRINTS PR01171 Bacterial lipocalin signature 50 66 1.6E-42 T 15-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 AM378_20945 60b9681aab95c96a572dd3b9fa58808e 177 SUPERFAMILY SSF50814 11 173 2.12E-48 T 15-10-2018 IPR012674 Calycin AM378_20945 60b9681aab95c96a572dd3b9fa58808e 177 Pfam PF08212 Lipocalin-like domain 34 173 1.4E-41 T 15-10-2018 IPR000566 Lipocalin/cytosolic fatty-acid binding domain AM378_20945 60b9681aab95c96a572dd3b9fa58808e 177 ProSitePatterns PS00213 Lipocalin signature. 34 45 - T 15-10-2018 IPR022272 Lipocalin family conserved site AM378_20945 60b9681aab95c96a572dd3b9fa58808e 177 Gene3D G3DSA:2.40.128.20 6 175 1.8E-54 T 15-10-2018 IPR012674 Calycin AM378_20945 60b9681aab95c96a572dd3b9fa58808e 177 PIRSF PIRSF036893 1 177 4.5E-47 T 15-10-2018 IPR022271 Lipocalin, ApoD type AM378_08140 4c0a0b39b393429a5d1b35798fe42c17 567 Pfam PF00916 Sulfate permease family 24 380 6.0E-80 T 15-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 AM378_08140 4c0a0b39b393429a5d1b35798fe42c17 567 SUPERFAMILY SSF52091 444 537 3.14E-9 T 15-10-2018 IPR036513 STAS domain superfamily AM378_08140 4c0a0b39b393429a5d1b35798fe42c17 567 Pfam PF01740 STAS domain 445 531 2.3E-11 T 15-10-2018 IPR002645 STAS domain AM378_08140 4c0a0b39b393429a5d1b35798fe42c17 567 Gene3D G3DSA:3.30.750.24 436 562 4.4E-17 T 15-10-2018 IPR036513 STAS domain superfamily AM378_10850 077557e9a0d953643c9cd31edf6d1bd7 1029 SUPERFAMILY SSF74650 741 1023 1.24E-89 T 15-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 AM378_10850 077557e9a0d953643c9cd31edf6d1bd7 1029 ProSitePatterns PS00608 Glycosyl hydrolases family 2 acid/base catalyst. 447 461 - T 15-10-2018 IPR023232 Glycoside hydrolase, family 2, active site KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 AM378_10850 077557e9a0d953643c9cd31edf6d1bd7 1029 Gene3D G3DSA:3.20.20.80 334 623 7.6E-126 T 15-10-2018 AM378_10850 077557e9a0d953643c9cd31edf6d1bd7 1029 SMART SM01038 751 1024 2.1E-115 T 15-10-2018 IPR004199 Beta galactosidase small chain/ domain 5 GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 AM378_10850 077557e9a0d953643c9cd31edf6d1bd7 1029 Gene3D G3DSA:2.60.120.260 6 220 4.8E-81 T 15-10-2018 IPR008979 Galactose-binding-like domain superfamily AM378_10850 077557e9a0d953643c9cd31edf6d1bd7 1029 ProSitePatterns PS00719 Glycosyl hydrolases family 2 signature 1. 385 410 - T 15-10-2018 IPR023230 Glycoside hydrolase, family 2, conserved site KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 AM378_10850 077557e9a0d953643c9cd31edf6d1bd7 1029 Pfam PF02837 Glycosyl hydrolases family 2, sugar binding domain 54 220 2.7E-62 T 15-10-2018 IPR006104 Glycosyl hydrolases family 2, sugar binding domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 AM378_10850 077557e9a0d953643c9cd31edf6d1bd7 1029 Gene3D G3DSA:2.60.40.10 221 333 1.3E-22 T 15-10-2018 IPR013783 Immunoglobulin-like fold AM378_10850 077557e9a0d953643c9cd31edf6d1bd7 1029 SUPERFAMILY SSF49785 16 220 1.2E-68 T 15-10-2018 IPR008979 Galactose-binding-like domain superfamily AM378_10850 077557e9a0d953643c9cd31edf6d1bd7 1029 PRINTS PR00132 Glycosyl hydrolase family 2 signature 531 546 6.1E-38 T 15-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 AM378_10850 077557e9a0d953643c9cd31edf6d1bd7 1029 PRINTS PR00132 Glycosyl hydrolase family 2 signature 148 163 6.1E-38 T 15-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 AM378_10850 077557e9a0d953643c9cd31edf6d1bd7 1029 PRINTS PR00132 Glycosyl hydrolase family 2 signature 447 462 6.1E-38 T 15-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 AM378_10850 077557e9a0d953643c9cd31edf6d1bd7 1029 PRINTS PR00132 Glycosyl hydrolase family 2 signature 375 393 6.1E-38 T 15-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 AM378_10850 077557e9a0d953643c9cd31edf6d1bd7 1029 PRINTS PR00132 Glycosyl hydrolase family 2 signature 344 358 6.1E-38 T 15-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 AM378_10850 077557e9a0d953643c9cd31edf6d1bd7 1029 Pfam PF00703 Glycosyl hydrolases family 2 222 333 2.1E-13 T 15-10-2018 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 AM378_10850 077557e9a0d953643c9cd31edf6d1bd7 1029 SUPERFAMILY SSF49303 622 730 1.15E-29 T 15-10-2018 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily AM378_10850 077557e9a0d953643c9cd31edf6d1bd7 1029 Gene3D G3DSA:2.60.40.10 628 730 1.2E-23 T 15-10-2018 IPR013783 Immunoglobulin-like fold AM378_10850 077557e9a0d953643c9cd31edf6d1bd7 1029 Pfam PF02929 Beta galactosidase small chain 755 1023 8.1E-56 T 15-10-2018 IPR004199 Beta galactosidase small chain/ domain 5 GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 AM378_10850 077557e9a0d953643c9cd31edf6d1bd7 1029 SUPERFAMILY SSF49303 223 333 8.63E-22 T 15-10-2018 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily AM378_10850 077557e9a0d953643c9cd31edf6d1bd7 1029 SUPERFAMILY SSF51445 335 624 8.77E-102 T 15-10-2018 IPR017853 Glycoside hydrolase superfamily AM378_10850 077557e9a0d953643c9cd31edf6d1bd7 1029 Pfam PF02836 Glycosyl hydrolases family 2, TIM barrel domain 335 627 2.1E-117 T 15-10-2018 IPR006103 Glycoside hydrolase family 2, catalytic domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-6798695 AM378_10850 077557e9a0d953643c9cd31edf6d1bd7 1029 Hamap MF_01687 Beta-galactosidase [lacZ]. 7 1026 17.523 T 15-10-2018 IPR023933 Glycoside hydrolase, family 2, beta-galactosidase GO:0016798 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 AM378_10850 077557e9a0d953643c9cd31edf6d1bd7 1029 Gene3D G3DSA:2.70.98.10 736 1025 2.0E-86 T 15-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 AM378_10850 077557e9a0d953643c9cd31edf6d1bd7 1029 Pfam PF16353 Domain of unknown function(DUF4981) 638 725 1.2E-17 T 15-10-2018 IPR032312 Beta-galactosidase, domain 4 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 AM378_05985 b98ab62f6182df9e3e06ce15de0e89bb 697 Gene3D G3DSA:3.40.50.1820 20 652 1.9E-142 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold AM378_05985 b98ab62f6182df9e3e06ce15de0e89bb 697 Gene3D G3DSA:2.130.10.120 71 423 1.9E-142 T 15-10-2018 AM378_05985 b98ab62f6182df9e3e06ce15de0e89bb 697 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 518 537 3.9E-46 T 15-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AM378_05985 b98ab62f6182df9e3e06ce15de0e89bb 697 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 603 618 3.9E-46 T 15-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AM378_05985 b98ab62f6182df9e3e06ce15de0e89bb 697 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 463 481 3.9E-46 T 15-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AM378_05985 b98ab62f6182df9e3e06ce15de0e89bb 697 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 622 644 3.9E-46 T 15-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AM378_05985 b98ab62f6182df9e3e06ce15de0e89bb 697 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 490 514 3.9E-46 T 15-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AM378_05985 b98ab62f6182df9e3e06ce15de0e89bb 697 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 548 568 3.9E-46 T 15-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AM378_05985 b98ab62f6182df9e3e06ce15de0e89bb 697 Pfam PF00326 Prolyl oligopeptidase family 486 690 1.4E-47 T 15-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 AM378_05985 b98ab62f6182df9e3e06ce15de0e89bb 697 Pfam PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain 330 421 8.2E-6 T 15-10-2018 IPR023302 Peptidase S9A, N-terminal domain GO:0004252|GO:0070008 AM378_05985 b98ab62f6182df9e3e06ce15de0e89bb 697 Pfam PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain 17 237 7.3E-26 T 15-10-2018 IPR023302 Peptidase S9A, N-terminal domain GO:0004252|GO:0070008 AM378_05985 b98ab62f6182df9e3e06ce15de0e89bb 697 SUPERFAMILY SSF53474 431 683 3.89E-47 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold AM378_05985 b98ab62f6182df9e3e06ce15de0e89bb 697 SUPERFAMILY SSF50993 20 428 5.23E-56 T 15-10-2018 AM378_17210 6b6a3f968c205b9eb3ab791dbc55fd9d 559 Pfam PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB 211 521 1.3E-95 T 15-10-2018 IPR005565 Haemolysin activator HlyB, C-terminal AM378_17210 6b6a3f968c205b9eb3ab791dbc55fd9d 559 Gene3D G3DSA:3.10.20.310 82 157 6.7E-9 T 15-10-2018 AM378_17210 6b6a3f968c205b9eb3ab791dbc55fd9d 559 Pfam PF08479 POTRA domain, ShlB-type 81 154 5.3E-19 T 15-10-2018 IPR013686 Polypeptide-transport-associated, ShlB-type AM378_17210 6b6a3f968c205b9eb3ab791dbc55fd9d 559 Gene3D G3DSA:2.40.160.50 184 559 4.0E-71 T 15-10-2018 AM378_17210 6b6a3f968c205b9eb3ab791dbc55fd9d 559 PIRSF PIRSF029745 1 559 3.1E-126 T 15-10-2018 IPR027282 Two partner secretion pathway transporter GO:0015031 AM378_17210 6b6a3f968c205b9eb3ab791dbc55fd9d 559 Pfam PF17287 POTRA domain 156 206 2.7E-14 T 15-10-2018 IPR035251 ShlB, POTRA domain AM378_10400 e1dcc607cde976c27db3072b2a6c49f2 265 Gene3D G3DSA:3.40.50.1820 22 260 1.0E-49 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold AM378_10400 e1dcc607cde976c27db3072b2a6c49f2 265 Pfam PF07859 alpha/beta hydrolase fold 64 170 1.7E-8 T 15-10-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0016787 AM378_10400 e1dcc607cde976c27db3072b2a6c49f2 265 SUPERFAMILY SSF53474 27 256 5.01E-43 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold AM378_02070 eec8d06d02ed8ab46b6a1800826dff62 484 Gene3D G3DSA:1.20.1250.20 14 233 1.8E-30 T 15-10-2018 AM378_02070 eec8d06d02ed8ab46b6a1800826dff62 484 Gene3D G3DSA:1.20.1250.20 263 464 7.3E-6 T 15-10-2018 AM378_02070 eec8d06d02ed8ab46b6a1800826dff62 484 PRINTS PR01035 Tetracycline resistance protein signature 144 166 6.2E-5 T 15-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AM378_02070 eec8d06d02ed8ab46b6a1800826dff62 484 PRINTS PR01035 Tetracycline resistance protein signature 30 46 6.2E-5 T 15-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AM378_02070 eec8d06d02ed8ab46b6a1800826dff62 484 PRINTS PR01035 Tetracycline resistance protein signature 265 285 6.2E-5 T 15-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AM378_02070 eec8d06d02ed8ab46b6a1800826dff62 484 Pfam PF07690 Major Facilitator Superfamily 25 403 2.0E-30 T 15-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM378_02070 eec8d06d02ed8ab46b6a1800826dff62 484 SUPERFAMILY SSF103473 6 460 3.4E-39 T 15-10-2018 IPR036259 MFS transporter superfamily AM378_21165 e75af425895836e293d3b9273aa48cd1 247 TIGRFAM TIGR01331 bisphos_cysQ: 3'(2'),5'-bisphosphate nucleotidase 2 245 1.6E-100 T 15-10-2018 IPR006240 3'(2'),5'-bisphosphate nucleotidase CysQ GO:0000287|GO:0006790|GO:0008441 KEGG: 00920+3.1.3.7 AM378_21165 e75af425895836e293d3b9273aa48cd1 247 Gene3D G3DSA:3.40.190.80 147 246 5.0E-33 T 15-10-2018 AM378_21165 e75af425895836e293d3b9273aa48cd1 247 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 81 94 - T 15-10-2018 IPR020583 Inositol monophosphatase, metal-binding site AM378_21165 e75af425895836e293d3b9273aa48cd1 247 SUPERFAMILY SSF56655 2 243 5.5E-73 T 15-10-2018 AM378_21165 e75af425895836e293d3b9273aa48cd1 247 Hamap MF_02095 3'(2'),5'-bisphosphate nucleotidase CysQ [cysQ]. 2 247 40.808 T 15-10-2018 IPR006240 3'(2'),5'-bisphosphate nucleotidase CysQ GO:0000287|GO:0006790|GO:0008441 KEGG: 00920+3.1.3.7 AM378_21165 e75af425895836e293d3b9273aa48cd1 247 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 205 219 - T 15-10-2018 IPR020550 Inositol monophosphatase, conserved site GO:0046854 AM378_21165 e75af425895836e293d3b9273aa48cd1 247 Gene3D G3DSA:3.30.540.10 2 146 1.6E-43 T 15-10-2018 AM378_21165 e75af425895836e293d3b9273aa48cd1 247 Pfam PF00459 Inositol monophosphatase family 7 234 3.8E-47 T 15-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AM378_14305 91973fddf5bf0c4d99045710c848d624 185 SUPERFAMILY SSF55194 2 184 1.03E-71 T 15-10-2018 IPR036191 RRF superfamily Reactome: R-HSA-5419276 AM378_14305 91973fddf5bf0c4d99045710c848d624 185 TIGRFAM TIGR00496 frr: ribosome recycling factor 11 185 5.7E-81 T 15-10-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 AM378_14305 91973fddf5bf0c4d99045710c848d624 185 Gene3D G3DSA:3.30.1360.40 35 100 1.2E-30 T 15-10-2018 AM378_14305 91973fddf5bf0c4d99045710c848d624 185 Gene3D G3DSA:1.10.132.20 101 185 3.6E-28 T 15-10-2018 AM378_14305 91973fddf5bf0c4d99045710c848d624 185 Gene3D G3DSA:1.10.132.20 1 34 9.3E-8 T 15-10-2018 AM378_14305 91973fddf5bf0c4d99045710c848d624 185 Pfam PF01765 Ribosome recycling factor 20 183 4.9E-64 T 15-10-2018 IPR023584 Ribosome recycling factor domain Reactome: R-HSA-5419276 AM378_14305 91973fddf5bf0c4d99045710c848d624 185 Hamap MF_00040 Ribosome-recycling factor [frr]. 3 185 28.108 T 15-10-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 AM378_14595 18cefa0b16a17f16d68e34deb27ea121 215 Pfam PF01323 DSBA-like thioredoxin domain 9 186 5.1E-7 T 15-10-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590|Reactome: R-HSA-9033241 AM378_14595 18cefa0b16a17f16d68e34deb27ea121 215 Gene3D G3DSA:3.40.30.10 1 212 1.5E-51 T 15-10-2018 AM378_14595 18cefa0b16a17f16d68e34deb27ea121 215 SUPERFAMILY SSF52833 4 210 9.45E-31 T 15-10-2018 IPR036249 Thioredoxin-like superfamily AM378_16435 7e9c45abff4a195ae6d7ec2c07b23d8d 101 Gene3D G3DSA:1.20.120.20 2 78 3.0E-5 T 15-10-2018 AM378_16435 7e9c45abff4a195ae6d7ec2c07b23d8d 101 Pfam PF05957 Bacterial protein of unknown function (DUF883) 9 101 5.9E-33 T 15-10-2018 IPR010279 Inner membrane protein YqjD/ElaB GO:0043022 AM378_08280 5417f79f0aeb73f841f406662a865df4 545 Gene3D G3DSA:3.90.76.10 73 196 4.3E-190 T 15-10-2018 AM378_08280 5417f79f0aeb73f841f406662a865df4 545 SUPERFAMILY SSF53850 37 527 8.87E-139 T 15-10-2018 AM378_08280 5417f79f0aeb73f841f406662a865df4 545 PIRSF PIRSF002741 1 545 2.6E-105 T 15-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 AM378_08280 5417f79f0aeb73f841f406662a865df4 545 Gene3D G3DSA:3.40.190.10 44 526 4.3E-190 T 15-10-2018 AM378_08280 5417f79f0aeb73f841f406662a865df4 545 Gene3D G3DSA:3.10.105.10 299 514 4.3E-190 T 15-10-2018 AM378_08280 5417f79f0aeb73f841f406662a865df4 545 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 84 465 4.6E-85 T 15-10-2018 IPR000914 Solute-binding protein family 5 domain AM378_10495 4f26f68920713d07b6a92505dd817499 151 SUPERFAMILY SSF49401 27 151 6.96E-24 T 15-10-2018 IPR008966 Adhesion domain superfamily AM378_10495 4f26f68920713d07b6a92505dd817499 151 Pfam PF00419 Fimbrial protein 20 151 1.3E-18 T 15-10-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM378_10495 4f26f68920713d07b6a92505dd817499 151 Gene3D G3DSA:2.60.40.1090 29 151 9.2E-39 T 15-10-2018 IPR036937 Fimbrial-type adhesion domain superfamily GO:0007155|GO:0009289 AM378_06595 ed5bcbb707c3207d5bc21a3215bc5041 163 Pfam PF12680 SnoaL-like domain 47 145 1.8E-11 T 15-10-2018 IPR037401 SnoaL-like domain AM378_06595 ed5bcbb707c3207d5bc21a3215bc5041 163 SUPERFAMILY SSF54427 44 157 4.91E-20 T 15-10-2018 IPR032710 NTF2-like domain superfamily AM378_06595 ed5bcbb707c3207d5bc21a3215bc5041 163 Gene3D G3DSA:3.10.450.50 38 163 1.2E-31 T 15-10-2018 AM378_04630 ce605f0c65f7057fa7bb041c5c1724ea 494 SMART SM00382 30 218 9.3E-11 T 15-10-2018 IPR003593 AAA+ ATPase domain AM378_04630 ce605f0c65f7057fa7bb041c5c1724ea 494 SMART SM00382 278 473 1.7E-6 T 15-10-2018 IPR003593 AAA+ ATPase domain AM378_04630 ce605f0c65f7057fa7bb041c5c1724ea 494 SUPERFAMILY SSF52540 268 482 2.34E-48 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_04630 ce605f0c65f7057fa7bb041c5c1724ea 494 ProSitePatterns PS00211 ABC transporters family signature. 397 411 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM378_04630 ce605f0c65f7057fa7bb041c5c1724ea 494 Pfam PF00005 ABC transporter 21 170 1.2E-33 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM378_04630 ce605f0c65f7057fa7bb041c5c1724ea 494 SUPERFAMILY SSF52540 4 231 9.82E-60 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_04630 ce605f0c65f7057fa7bb041c5c1724ea 494 Gene3D G3DSA:3.40.50.300 262 490 7.7E-46 T 15-10-2018 AM378_04630 ce605f0c65f7057fa7bb041c5c1724ea 494 Gene3D G3DSA:3.40.50.300 3 247 7.9E-59 T 15-10-2018 AM378_04630 ce605f0c65f7057fa7bb041c5c1724ea 494 Pfam PF00005 ABC transporter 270 424 6.7E-23 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM378_14355 d50839fad35111caf8f44e2819bf0a79 782 Gene3D G3DSA:3.40.710.10 249 613 1.8E-74 T 15-10-2018 AM378_14355 d50839fad35111caf8f44e2819bf0a79 782 Pfam PF06832 Penicillin-Binding Protein C-terminus Family 693 773 2.9E-15 T 15-10-2018 IPR009647 Penicillin-binding, C-terminal KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AM378_14355 d50839fad35111caf8f44e2819bf0a79 782 Pfam PF00905 Penicillin binding protein transpeptidase domain 312 526 1.7E-17 T 15-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 AM378_14355 d50839fad35111caf8f44e2819bf0a79 782 SUPERFAMILY SSF56601 220 647 8.35E-94 T 15-10-2018 IPR012338 Beta-lactamase/transpeptidase-like AM378_14355 d50839fad35111caf8f44e2819bf0a79 782 Pfam PF00912 Transglycosylase 59 206 5.6E-41 T 15-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AM378_14355 d50839fad35111caf8f44e2819bf0a79 782 TIGRFAM TIGR02073 PBP_1c: penicillin-binding protein 1C 32 778 5.6E-272 T 15-10-2018 IPR011815 Penicillin-binding protein 1C GO:0008955|GO:0009252 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AM378_14355 d50839fad35111caf8f44e2819bf0a79 782 SUPERFAMILY SSF53955 38 260 8.44E-52 T 15-10-2018 IPR023346 Lysozyme-like domain superfamily AM378_14355 d50839fad35111caf8f44e2819bf0a79 782 Gene3D G3DSA:1.10.3810.10 42 241 9.8E-43 T 15-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AM378_04530 fb34641f2de605c89a90d67e2e4563b0 677 SUPERFAMILY SSF53474 414 655 3.07E-48 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold AM378_04530 fb34641f2de605c89a90d67e2e4563b0 677 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 530 550 1.0E-55 T 15-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AM378_04530 fb34641f2de605c89a90d67e2e4563b0 677 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 588 603 1.0E-55 T 15-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AM378_04530 fb34641f2de605c89a90d67e2e4563b0 677 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 446 464 1.0E-55 T 15-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AM378_04530 fb34641f2de605c89a90d67e2e4563b0 677 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 500 519 1.0E-55 T 15-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AM378_04530 fb34641f2de605c89a90d67e2e4563b0 677 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 606 628 1.0E-55 T 15-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AM378_04530 fb34641f2de605c89a90d67e2e4563b0 677 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 472 496 1.0E-55 T 15-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AM378_04530 fb34641f2de605c89a90d67e2e4563b0 677 Pfam PF00326 Prolyl oligopeptidase family 461 674 4.2E-70 T 15-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 AM378_04530 fb34641f2de605c89a90d67e2e4563b0 677 SUPERFAMILY SSF50993 1 406 1.46E-87 T 15-10-2018 AM378_04530 fb34641f2de605c89a90d67e2e4563b0 677 Gene3D G3DSA:3.40.50.1820 23 673 8.7E-255 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold AM378_04530 fb34641f2de605c89a90d67e2e4563b0 677 Gene3D G3DSA:2.130.10.120 74 405 8.7E-255 T 15-10-2018 AM378_04530 fb34641f2de605c89a90d67e2e4563b0 677 Pfam PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain 5 404 8.5E-103 T 15-10-2018 IPR023302 Peptidase S9A, N-terminal domain GO:0004252|GO:0070008 AM378_09525 519fc51d9800198300d66223000f75e5 266 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 65 78 - T 15-10-2018 IPR018313 Solute-binding protein family 3, conserved site AM378_09525 519fc51d9800198300d66223000f75e5 266 Gene3D G3DSA:3.40.190.10 126 225 1.0E-73 T 15-10-2018 AM378_09525 519fc51d9800198300d66223000f75e5 266 SUPERFAMILY SSF53850 17 264 6.34E-78 T 15-10-2018 AM378_09525 519fc51d9800198300d66223000f75e5 266 SMART SM00079 42 262 6.2E-5 T 15-10-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 AM378_09525 519fc51d9800198300d66223000f75e5 266 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 43 261 3.1E-73 T 15-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AM378_09525 519fc51d9800198300d66223000f75e5 266 Gene3D G3DSA:3.40.190.10 40 260 1.0E-73 T 15-10-2018 AM378_09525 519fc51d9800198300d66223000f75e5 266 SMART SM00062 42 263 7.9E-88 T 15-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AM378_16835 fa48a182196bfa5147f74384215c1558 481 SUPERFAMILY SSF111283 19 480 2.75E-132 T 15-10-2018 IPR036059 Metalloprotease TldD/PmbA superfamily GO:0006508|GO:0008237 AM378_16835 fa48a182196bfa5147f74384215c1558 481 Pfam PF01523 Putative modulator of DNA gyrase 35 332 3.4E-71 T 15-10-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 AM378_16835 fa48a182196bfa5147f74384215c1558 481 Gene3D G3DSA:3.30.2290.10 8 240 6.8E-22 T 15-10-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal AM378_16835 fa48a182196bfa5147f74384215c1558 481 PIRSF PIRSF004919 14 481 3.4E-147 T 15-10-2018 IPR025502 TldD AM378_05580 e7cc361f2cf1a4485ed58732c78d7a66 554 Pfam PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase 10 239 1.1E-34 T 15-10-2018 IPR003342 Glycosyl transferase family 39/83 GO:0000030|GO:0006493|GO:0016020 Reactome: R-HSA-5173105 AM378_05580 e7cc361f2cf1a4485ed58732c78d7a66 554 Hamap MF_01165 Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase [arnT]. 3 553 42.831 T 15-10-2018 IPR022839 Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase GO:0016763 AM378_22185 6819df22cf409688ba46409eb65aa7a3 246 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 130 158 - T 15-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AM378_22185 6819df22cf409688ba46409eb65aa7a3 246 Gene3D G3DSA:3.40.50.720 1 245 1.1E-76 T 15-10-2018 AM378_22185 6819df22cf409688ba46409eb65aa7a3 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 69 80 4.6E-40 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_22185 6819df22cf409688ba46409eb65aa7a3 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 143 162 4.6E-40 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_22185 6819df22cf409688ba46409eb65aa7a3 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 4.6E-40 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_22185 6819df22cf409688ba46409eb65aa7a3 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 164 181 4.6E-40 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_22185 6819df22cf409688ba46409eb65aa7a3 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 208 228 4.6E-40 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_22185 6819df22cf409688ba46409eb65aa7a3 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 116 132 4.6E-40 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_22185 6819df22cf409688ba46409eb65aa7a3 246 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 245 4.5E-60 T 15-10-2018 AM378_22185 6819df22cf409688ba46409eb65aa7a3 246 SUPERFAMILY SSF51735 5 245 2.98E-76 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily AM378_22185 6819df22cf409688ba46409eb65aa7a3 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 143 162 1.1E-12 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_22185 6819df22cf409688ba46409eb65aa7a3 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 69 80 1.1E-12 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_22185 6819df22cf409688ba46409eb65aa7a3 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 122 130 1.1E-12 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_12835 a32decfe75a56fca9dc23a63188baccb 237 ProSitePatterns PS01058 SAICAR synthetase signature 2. 173 181 - T 15-10-2018 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AM378_12835 a32decfe75a56fca9dc23a63188baccb 237 Pfam PF01259 SAICAR synthetase 7 231 4.1E-58 T 15-10-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AM378_12835 a32decfe75a56fca9dc23a63188baccb 237 SUPERFAMILY SSF56104 2 232 6.21E-76 T 15-10-2018 AM378_12835 a32decfe75a56fca9dc23a63188baccb 237 ProSitePatterns PS01057 SAICAR synthetase signature 1. 86 100 - T 15-10-2018 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AM378_12835 a32decfe75a56fca9dc23a63188baccb 237 Gene3D G3DSA:3.30.470.20 85 220 3.4E-90 T 15-10-2018 AM378_12835 a32decfe75a56fca9dc23a63188baccb 237 Hamap MF_00137 Phosphoribosylaminoimidazole-succinocarboxamide synthase [purC]. 4 234 28.969 T 15-10-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AM378_12835 a32decfe75a56fca9dc23a63188baccb 237 TIGRFAM TIGR00081 purC: phosphoribosylaminoimidazolesuccinocarboxamide synthase 3 235 3.6E-80 T 15-10-2018 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234 AM378_12835 a32decfe75a56fca9dc23a63188baccb 237 Gene3D G3DSA:3.30.200.20 7 231 3.4E-90 T 15-10-2018 AM378_18765 eb25c152559fc11d3b445c6860299c91 203 Gene3D G3DSA:1.10.10.10 2 83 3.5E-11 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_18765 eb25c152559fc11d3b445c6860299c91 203 SUPERFAMILY SSF46785 6 179 1.19E-26 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM378_18765 eb25c152559fc11d3b445c6860299c91 203 Pfam PF08279 HTH domain 7 42 3.6E-5 T 15-10-2018 IPR013196 Helix-turn-helix, type 11 AM378_22925 dff3cee585ae7e82d8caf6a13ff74634 145 Pfam PF07963 Prokaryotic N-terminal methylation motif 3 25 1.2E-9 T 15-10-2018 IPR012902 Prokaryotic N-terminal methylation site AM378_22925 dff3cee585ae7e82d8caf6a13ff74634 145 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 5 25 - T 15-10-2018 IPR012902 Prokaryotic N-terminal methylation site AM378_22925 dff3cee585ae7e82d8caf6a13ff74634 145 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 4 27 1.1E-10 T 15-10-2018 IPR012902 Prokaryotic N-terminal methylation site AM378_22925 dff3cee585ae7e82d8caf6a13ff74634 145 Gene3D G3DSA:3.30.700.10 7 138 1.2E-27 T 15-10-2018 AM378_22925 dff3cee585ae7e82d8caf6a13ff74634 145 SUPERFAMILY SSF54523 7 115 2.35E-22 T 15-10-2018 AM378_22925 dff3cee585ae7e82d8caf6a13ff74634 145 Pfam PF00114 Pilin (bacterial filament) 36 120 2.0E-5 T 15-10-2018 IPR001082 Fimbrial protein pilin GO:0007155|GO:0009289 AM378_01500 fc2010b898f9d16745d40d0e4a156a07 314 Pfam PF01965 DJ-1/PfpI family 3 170 2.4E-23 T 15-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 AM378_01500 fc2010b898f9d16745d40d0e4a156a07 314 SUPERFAMILY SSF46689 208 256 3.81E-8 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AM378_01500 fc2010b898f9d16745d40d0e4a156a07 314 Pfam PF12833 Helix-turn-helix domain 231 309 2.5E-21 T 15-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM378_01500 fc2010b898f9d16745d40d0e4a156a07 314 Gene3D G3DSA:1.10.10.60 208 312 4.5E-27 T 15-10-2018 AM378_01500 fc2010b898f9d16745d40d0e4a156a07 314 SMART SM00342 225 308 1.5E-26 T 15-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM378_01500 fc2010b898f9d16745d40d0e4a156a07 314 SUPERFAMILY SSF52317 1 191 3.79E-50 T 15-10-2018 IPR029062 Class I glutamine amidotransferase-like AM378_01500 fc2010b898f9d16745d40d0e4a156a07 314 Gene3D G3DSA:3.40.50.880 1 199 2.2E-65 T 15-10-2018 IPR029062 Class I glutamine amidotransferase-like AM378_01500 fc2010b898f9d16745d40d0e4a156a07 314 SUPERFAMILY SSF46689 261 309 1.93E-8 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AM378_03690 6d9181f2c0ab49bc79ce1e813905d05e 175 Gene3D G3DSA:1.10.10.10 1 167 1.7E-47 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_03690 6d9181f2c0ab49bc79ce1e813905d05e 175 Pfam PF01638 HxlR-like helix-turn-helix 20 104 2.0E-20 T 15-10-2018 IPR002577 Helix-turn-helix, HxlR type AM378_03690 6d9181f2c0ab49bc79ce1e813905d05e 175 SUPERFAMILY SSF46785 6 107 6.71E-33 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM378_01415 a25baa1a26dd32498316675b7ec8c3b6 310 Pfam PF01207 Dihydrouridine synthase (Dus) 5 293 1.1E-88 T 15-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 AM378_01415 a25baa1a26dd32498316675b7ec8c3b6 310 Gene3D G3DSA:1.20.225.30 243 309 2.8E-32 T 15-10-2018 AM378_01415 a25baa1a26dd32498316675b7ec8c3b6 310 Gene3D G3DSA:3.20.20.70 1 242 5.6E-86 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM378_01415 a25baa1a26dd32498316675b7ec8c3b6 310 PIRSF PIRSF006621 1 309 1.2E-80 T 15-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 AM378_01415 a25baa1a26dd32498316675b7ec8c3b6 310 Hamap MF_02043 tRNA-dihydrouridine(16) synthase [dusC]. 8 310 51.839 T 15-10-2018 IPR032886 tRNA-dihydrouridine(16) synthase GO:0002943|GO:0017150 AM378_01415 a25baa1a26dd32498316675b7ec8c3b6 310 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 92 110 - T 15-10-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 AM378_01415 a25baa1a26dd32498316675b7ec8c3b6 310 SUPERFAMILY SSF51395 1 302 2.01E-70 T 15-10-2018 AM378_01010 9f6b38014b8848c37c2f0fe0b15698b2 129 SUPERFAMILY SSF81343 3 129 1.24E-34 T 15-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AM378_01010 9f6b38014b8848c37c2f0fe0b15698b2 129 TIGRFAM TIGR02970 succ_dehyd_cytB: succinate dehydrogenase, cytochrome b556 subunit 7 126 6.5E-40 T 15-10-2018 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AM378_01010 9f6b38014b8848c37c2f0fe0b15698b2 129 Gene3D G3DSA:1.20.1300.10 2 129 3.1E-47 T 15-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AM378_01010 9f6b38014b8848c37c2f0fe0b15698b2 129 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 6 123 1.6E-30 T 15-10-2018 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit GO:0016627 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AM378_01010 9f6b38014b8848c37c2f0fe0b15698b2 129 ProSitePatterns PS01000 Succinate dehydrogenase cytochrome b subunit signature 1. 9 33 - T 15-10-2018 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site GO:0000104|GO:0006099|GO:0009055|GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AM378_01010 9f6b38014b8848c37c2f0fe0b15698b2 129 ProSitePatterns PS01001 Succinate dehydrogenase cytochrome b subunit signature 2. 84 97 - T 15-10-2018 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site GO:0000104|GO:0006099|GO:0009055|GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AM378_01010 9f6b38014b8848c37c2f0fe0b15698b2 129 PIRSF PIRSF000178 2 129 5.2E-32 T 15-10-2018 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AM378_00350 201a4954adf8c6055383bd32e9aec2d9 1902 Pfam PF00550 Phosphopantetheine attachment site 793 855 1.6E-7 T 15-10-2018 IPR009081 Phosphopantetheine binding ACP domain AM378_00350 201a4954adf8c6055383bd32e9aec2d9 1902 Pfam PF00550 Phosphopantetheine attachment site 1829 1888 1.7E-8 T 15-10-2018 IPR009081 Phosphopantetheine binding ACP domain AM378_00350 201a4954adf8c6055383bd32e9aec2d9 1902 Gene3D G3DSA:3.30.559.10 875 1238 2.0E-100 T 15-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 AM378_00350 201a4954adf8c6055383bd32e9aec2d9 1902 Gene3D G3DSA:3.30.300.30 1710 1809 3.3E-23 T 15-10-2018 AM378_00350 201a4954adf8c6055383bd32e9aec2d9 1902 Pfam PF00501 AMP-binding enzyme 297 683 1.5E-80 T 15-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 AM378_00350 201a4954adf8c6055383bd32e9aec2d9 1902 Pfam PF00501 AMP-binding enzyme 1330 1715 1.7E-91 T 15-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 AM378_00350 201a4954adf8c6055383bd32e9aec2d9 1902 Gene3D G3DSA:1.10.1200.10 781 865 4.7E-16 T 15-10-2018 IPR036736 ACP-like superfamily AM378_00350 201a4954adf8c6055383bd32e9aec2d9 1902 Gene3D G3DSA:3.30.300.30 678 780 1.3E-26 T 15-10-2018 AM378_00350 201a4954adf8c6055383bd32e9aec2d9 1902 Gene3D G3DSA:3.40.50.12780 1314 1709 3.0E-111 T 15-10-2018 AM378_00350 201a4954adf8c6055383bd32e9aec2d9 1902 Gene3D G3DSA:3.40.50.12780 284 677 1.3E-107 T 15-10-2018 AM378_00350 201a4954adf8c6055383bd32e9aec2d9 1902 Gene3D G3DSA:1.10.1200.10 1810 1896 8.8E-17 T 15-10-2018 IPR036736 ACP-like superfamily AM378_00350 201a4954adf8c6055383bd32e9aec2d9 1902 SUPERFAMILY SSF52777 872 1064 1.89E-35 T 15-10-2018 AM378_00350 201a4954adf8c6055383bd32e9aec2d9 1902 SUPERFAMILY SSF56801 291 801 4.45E-132 T 15-10-2018 AM378_00350 201a4954adf8c6055383bd32e9aec2d9 1902 SUPERFAMILY SSF52777 1052 1292 1.33E-49 T 15-10-2018 AM378_00350 201a4954adf8c6055383bd32e9aec2d9 1902 Pfam PF13193 AMP-binding enzyme C-terminal domain 691 764 2.0E-13 T 15-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain AM378_00350 201a4954adf8c6055383bd32e9aec2d9 1902 Pfam PF00668 Condensation domain 872 1295 4.5E-71 T 15-10-2018 IPR001242 Condensation domain AM378_00350 201a4954adf8c6055383bd32e9aec2d9 1902 SUPERFAMILY SSF47336 1818 1888 1.96E-12 T 15-10-2018 IPR036736 ACP-like superfamily AM378_00350 201a4954adf8c6055383bd32e9aec2d9 1902 Gene3D G3DSA:3.30.559.30 1049 1290 2.0E-100 T 15-10-2018 AM378_00350 201a4954adf8c6055383bd32e9aec2d9 1902 SMART SM00823 Phosphopantetheine attachment site 1825 1894 0.082 T 15-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 AM378_00350 201a4954adf8c6055383bd32e9aec2d9 1902 SMART SM00823 Phosphopantetheine attachment site 790 859 0.0086 T 15-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 AM378_00350 201a4954adf8c6055383bd32e9aec2d9 1902 ProSitePatterns PS00455 Putative AMP-binding domain signature. 433 444 - T 15-10-2018 IPR020845 AMP-binding, conserved site AM378_00350 201a4954adf8c6055383bd32e9aec2d9 1902 SUPERFAMILY SSF56801 1327 1836 1.05E-127 T 15-10-2018 AM378_00350 201a4954adf8c6055383bd32e9aec2d9 1902 SUPERFAMILY SSF47336 784 856 8.11E-13 T 15-10-2018 IPR036736 ACP-like superfamily AM378_00350 201a4954adf8c6055383bd32e9aec2d9 1902 ProSitePatterns PS00455 Putative AMP-binding domain signature. 1463 1474 - T 15-10-2018 IPR020845 AMP-binding, conserved site AM378_00350 201a4954adf8c6055383bd32e9aec2d9 1902 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 318 707 4.9E-110 T 15-10-2018 IPR010071 Amino acid adenylation domain AM378_00350 201a4954adf8c6055383bd32e9aec2d9 1902 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 1349 1736 1.7E-110 T 15-10-2018 IPR010071 Amino acid adenylation domain AM378_02535 66b4c55d9697c6683a18960de88bafca 251 Gene3D G3DSA:3.40.50.720 5 251 6.0E-91 T 15-10-2018 AM378_02535 66b4c55d9697c6683a18960de88bafca 251 Pfam PF00899 ThiF family 13 245 1.4E-63 T 15-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 AM378_02535 66b4c55d9697c6683a18960de88bafca 251 TIGRFAM TIGR02355 moeB: molybdopterin synthase sulfurylase MoeB 9 248 1.5E-121 T 15-10-2018 IPR012730 Molybdopterin synthase sulfurylase MoeB GO:0006777 MetaCyc: PWY-6823 AM378_02535 66b4c55d9697c6683a18960de88bafca 251 SUPERFAMILY SSF69572 4 249 3.53E-88 T 15-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 AM378_04535 ef9acfd5c9d4a109fe3310337e956020 222 SMART SM00479 2 159 2.0E-27 T 15-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III AM378_04535 ef9acfd5c9d4a109fe3310337e956020 222 Gene3D G3DSA:3.30.420.10 3 177 1.8E-41 T 15-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AM378_04535 ef9acfd5c9d4a109fe3310337e956020 222 Pfam PF00929 Exonuclease 5 150 5.5E-10 T 15-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III AM378_04535 ef9acfd5c9d4a109fe3310337e956020 222 SUPERFAMILY SSF53098 1 187 2.39E-31 T 15-10-2018 IPR012337 Ribonuclease H-like superfamily AM378_04345 a7b32a9014b447d5fab13cd471adcb09 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 125 141 4.0E-49 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_04345 a7b32a9014b447d5fab13cd471adcb09 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 4.0E-49 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_04345 a7b32a9014b447d5fab13cd471adcb09 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 151 170 4.0E-49 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_04345 a7b32a9014b447d5fab13cd471adcb09 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 172 189 4.0E-49 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_04345 a7b32a9014b447d5fab13cd471adcb09 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 78 89 4.0E-49 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_04345 a7b32a9014b447d5fab13cd471adcb09 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 205 225 4.0E-49 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_04345 a7b32a9014b447d5fab13cd471adcb09 244 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 241 3.2E-66 T 15-10-2018 AM378_04345 a7b32a9014b447d5fab13cd471adcb09 244 TIGRFAM TIGR01830 3oxo_ACP_reduc: 3-oxoacyl-[acyl-carrier-protein] reductase 8 242 1.2E-100 T 15-10-2018 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase GO:0004316|GO:0006633|GO:0051287|GO:0055114 KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 AM378_04345 a7b32a9014b447d5fab13cd471adcb09 244 SUPERFAMILY SSF51735 4 243 6.33E-86 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily AM378_04345 a7b32a9014b447d5fab13cd471adcb09 244 Gene3D G3DSA:3.40.50.720 1 244 1.5E-86 T 15-10-2018 AM378_04345 a7b32a9014b447d5fab13cd471adcb09 244 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 187 1.4E-5 T 15-10-2018 AM378_04345 a7b32a9014b447d5fab13cd471adcb09 244 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 138 166 - T 15-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AM378_04345 a7b32a9014b447d5fab13cd471adcb09 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 131 139 2.9E-15 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_04345 a7b32a9014b447d5fab13cd471adcb09 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 151 170 2.9E-15 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_04345 a7b32a9014b447d5fab13cd471adcb09 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 78 89 2.9E-15 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_20380 b205f5b2f6bc4c6f533c54658c943cec 356 SUPERFAMILY SSF52540 4 242 1.05E-85 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_20380 b205f5b2f6bc4c6f533c54658c943cec 356 Pfam PF08402 TOBE domain 278 347 1.8E-7 T 15-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 AM378_20380 b205f5b2f6bc4c6f533c54658c943cec 356 SMART SM00382 29 212 6.1E-13 T 15-10-2018 IPR003593 AAA+ ATPase domain AM378_20380 b205f5b2f6bc4c6f533c54658c943cec 356 Pfam PF00005 ABC transporter 21 162 1.4E-30 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM378_20380 b205f5b2f6bc4c6f533c54658c943cec 356 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM378_20380 b205f5b2f6bc4c6f533c54658c943cec 356 Gene3D G3DSA:2.40.50.140 285 339 4.4E-28 T 15-10-2018 AM378_20380 b205f5b2f6bc4c6f533c54658c943cec 356 SUPERFAMILY SSF50331 237 354 6.32E-29 T 15-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal AM378_20380 b205f5b2f6bc4c6f533c54658c943cec 356 Gene3D G3DSA:2.40.50.940 223 348 4.4E-28 T 15-10-2018 AM378_20380 b205f5b2f6bc4c6f533c54658c943cec 356 Gene3D G3DSA:3.40.50.300 4 222 1.3E-64 T 15-10-2018 AM378_17285 5acb432d4104b67adee37ba59f52e514 584 ProDom PD043552 KINASE KINASE/PHOSPHATASE ISOCITRATE DEHYDROGENASE 3.1.3.- IDH TRANSFERASE IDHK/P HYDROLASE ENZYME 8 572 0.0 T 15-10-2018 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 AM378_17285 5acb432d4104b67adee37ba59f52e514 584 Pfam PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) 9 566 3.1E-254 T 15-10-2018 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 AM378_17285 5acb432d4104b67adee37ba59f52e514 584 PIRSF PIRSF000719 1 575 1.6E-291 T 15-10-2018 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 AM378_17285 5acb432d4104b67adee37ba59f52e514 584 Hamap MF_00747 Isocitrate dehydrogenase kinase/phosphatase [aceK]. 1 570 44.331 T 15-10-2018 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 AM378_10475 f68ecac5858453ac87415b186d01f396 233 Gene3D G3DSA:1.10.10.10 109 203 2.7E-15 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_10475 f68ecac5858453ac87415b186d01f396 233 SMART SM00421 136 193 4.4E-9 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM378_10475 f68ecac5858453ac87415b186d01f396 233 SUPERFAMILY SSF46894 129 198 1.97E-15 T 15-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AM378_10475 f68ecac5858453ac87415b186d01f396 233 Pfam PF00196 Bacterial regulatory proteins, luxR family 139 192 4.8E-12 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM378_08405 11143d8731c6b30b773b1992313c0ee5 618 SUPERFAMILY SSF52096 322 530 1.09E-40 T 15-10-2018 IPR029045 ClpP/crotonase-like domain superfamily AM378_08405 11143d8731c6b30b773b1992313c0ee5 618 Gene3D G3DSA:3.90.226.10 97 318 9.9E-167 T 15-10-2018 AM378_08405 11143d8731c6b30b773b1992313c0ee5 618 TIGRFAM TIGR00705 SppA_67K: signal peptide peptidase SppA, 67K type 16 609 1.1E-229 T 15-10-2018 IPR004634 Peptidase S49, protease IV GO:0006465|GO:0008233|GO:0016021 AM378_08405 11143d8731c6b30b773b1992313c0ee5 618 TIGRFAM TIGR00706 SppA_dom: signal peptide peptidase SppA, 36K type 327 541 1.7E-53 T 15-10-2018 IPR004635 Peptidase S49, SppA GO:0006508|GO:0008233 AM378_08405 11143d8731c6b30b773b1992313c0ee5 618 SUPERFAMILY SSF52096 35 287 2.49E-26 T 15-10-2018 IPR029045 ClpP/crotonase-like domain superfamily AM378_08405 11143d8731c6b30b773b1992313c0ee5 618 Pfam PF01343 Peptidase family S49 393 542 2.0E-50 T 15-10-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 AM378_08405 11143d8731c6b30b773b1992313c0ee5 618 Pfam PF01343 Peptidase family S49 141 292 7.3E-36 T 15-10-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 AM378_08405 11143d8731c6b30b773b1992313c0ee5 618 PIRSF PIRSF001217 8 618 1.8E-216 T 15-10-2018 IPR004634 Peptidase S49, protease IV GO:0006465|GO:0008233|GO:0016021 AM378_08405 11143d8731c6b30b773b1992313c0ee5 618 Gene3D G3DSA:3.40.1750.10 189 498 9.9E-167 T 15-10-2018 AM378_08405 11143d8731c6b30b773b1992313c0ee5 618 Gene3D G3DSA:3.90.226.10 319 541 9.9E-167 T 15-10-2018 AM378_04725 6fd94eaddcc834d0fc44718dd1272731 197 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 7 197 40.264 T 15-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AM378_04725 6fd94eaddcc834d0fc44718dd1272731 197 Pfam PF00574 Clp protease 17 196 3.2E-78 T 15-10-2018 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA AM378_04725 6fd94eaddcc834d0fc44718dd1272731 197 SUPERFAMILY SSF52096 14 195 2.41E-70 T 15-10-2018 IPR029045 ClpP/crotonase-like domain superfamily AM378_04725 6fd94eaddcc834d0fc44718dd1272731 197 Gene3D G3DSA:3.90.226.10 1 197 1.5E-81 T 15-10-2018 AM378_04725 6fd94eaddcc834d0fc44718dd1272731 197 PRINTS PR00127 Clp protease catalytic subunit P signature 23 38 1.2E-45 T 15-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AM378_04725 6fd94eaddcc834d0fc44718dd1272731 197 PRINTS PR00127 Clp protease catalytic subunit P signature 115 134 1.2E-45 T 15-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AM378_04725 6fd94eaddcc834d0fc44718dd1272731 197 PRINTS PR00127 Clp protease catalytic subunit P signature 63 83 1.2E-45 T 15-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AM378_04725 6fd94eaddcc834d0fc44718dd1272731 197 PRINTS PR00127 Clp protease catalytic subunit P signature 172 191 1.2E-45 T 15-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AM378_04725 6fd94eaddcc834d0fc44718dd1272731 197 PRINTS PR00127 Clp protease catalytic subunit P signature 94 111 1.2E-45 T 15-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AM378_19650 7f58d2f8cda814d7b8ccd364b86d73f8 211 TIGRFAM TIGR01583 formate-DH-gamm: formate dehydrogenase, gamma subunit 7 204 2.4E-67 T 15-10-2018 IPR006471 Formate dehydrogenase, gamma subunit GO:0008863|GO:0009326|GO:0016021|GO:0045333 AM378_19650 7f58d2f8cda814d7b8ccd364b86d73f8 211 SUPERFAMILY SSF81342 4 208 1.73E-55 T 15-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 AM378_19650 7f58d2f8cda814d7b8ccd364b86d73f8 211 Gene3D G3DSA:1.20.950.20 1 211 2.3E-71 T 15-10-2018 AM378_19650 7f58d2f8cda814d7b8ccd364b86d73f8 211 Pfam PF01292 Prokaryotic cytochrome b561 9 184 5.8E-22 T 15-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 AM378_08255 dae67a796bf4635419e0c9e8240485ce 333 SMART SM00382 48 241 4.1E-18 T 15-10-2018 IPR003593 AAA+ ATPase domain AM378_08255 dae67a796bf4635419e0c9e8240485ce 333 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 243 310 1.3E-19 T 15-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AM378_08255 dae67a796bf4635419e0c9e8240485ce 333 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 241 328 4.2E-29 T 15-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AM378_08255 dae67a796bf4635419e0c9e8240485ce 333 Pfam PF00005 ABC transporter 40 191 6.0E-31 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM378_08255 dae67a796bf4635419e0c9e8240485ce 333 SUPERFAMILY SSF52540 25 263 8.23E-74 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_08255 dae67a796bf4635419e0c9e8240485ce 333 Gene3D G3DSA:3.40.50.300 8 332 5.1E-97 T 15-10-2018 AM378_08255 dae67a796bf4635419e0c9e8240485ce 333 ProSitePatterns PS00211 ABC transporters family signature. 164 178 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM378_15365 4f62f653ddb752d3b00385b96c7d2f43 830 TIGRFAM TIGR02071 PBP_1b: penicillin-binding protein 1B 71 797 0.0 T 15-10-2018 IPR011813 Penicillin-binding protein 1B GO:0008233|GO:0008955|GO:0009252|GO:0009274|GO:0046677 KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AM378_15365 4f62f653ddb752d3b00385b96c7d2f43 830 SUPERFAMILY SSF56601 365 789 3.45E-108 T 15-10-2018 IPR012338 Beta-lactamase/transpeptidase-like AM378_15365 4f62f653ddb752d3b00385b96c7d2f43 830 SUPERFAMILY SSF53955 199 406 5.06E-66 T 15-10-2018 IPR023346 Lysozyme-like domain superfamily AM378_15365 4f62f653ddb752d3b00385b96c7d2f43 830 Gene3D G3DSA:1.10.3810.10 204 407 1.2E-266 T 15-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AM378_15365 4f62f653ddb752d3b00385b96c7d2f43 830 Pfam PF00912 Transglycosylase 212 383 6.4E-55 T 15-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AM378_15365 4f62f653ddb752d3b00385b96c7d2f43 830 Gene3D G3DSA:3.30.2060.10 114 203 1.2E-266 T 15-10-2018 AM378_15365 4f62f653ddb752d3b00385b96c7d2f43 830 Pfam PF14812 Transmembrane domain of transglycosylase PBP1 at N-terminal 1 82 1.1E-30 T 15-10-2018 IPR032730 Transglycosylase PBP1b, N-terminal transmembrane domain AM378_15365 4f62f653ddb752d3b00385b96c7d2f43 830 Gene3D G3DSA:3.40.710.10 106 764 1.2E-266 T 15-10-2018 AM378_15365 4f62f653ddb752d3b00385b96c7d2f43 830 Pfam PF00905 Penicillin binding protein transpeptidase domain 476 722 5.7E-23 T 15-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 AM378_15365 4f62f653ddb752d3b00385b96c7d2f43 830 Gene3D G3DSA:1.20.5.100 57 99 1.5E-19 T 15-10-2018 AM378_15365 4f62f653ddb752d3b00385b96c7d2f43 830 PIRSF PIRSF002799 42 830 0.0 T 15-10-2018 IPR011813 Penicillin-binding protein 1B GO:0008233|GO:0008955|GO:0009252|GO:0009274|GO:0046677 KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AM378_15365 4f62f653ddb752d3b00385b96c7d2f43 830 Pfam PF14814 Bifunctional transglycosylase second domain 116 200 4.3E-30 T 15-10-2018 IPR028166 Bifunctional transglycosylase second domain KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AM378_06140 5175960fb4823fd3b0ff2b30b0e64e09 312 Gene3D G3DSA:3.30.54.10 174 306 4.4E-118 T 15-10-2018 AM378_06140 5175960fb4823fd3b0ff2b30b0e64e09 312 Pfam PF05472 DNA replication terminus site-binding protein (Ter protein) 9 306 2.0E-139 T 15-10-2018 IPR008865 DNA replication terminus site-binding protein GO:0003677|GO:0005737|GO:0006274 AM378_06140 5175960fb4823fd3b0ff2b30b0e64e09 312 TIGRFAM TIGR02648 rep_term_tus: DNA replication terminus site-binding protein 10 308 2.1E-156 T 15-10-2018 IPR008865 DNA replication terminus site-binding protein GO:0003677|GO:0005737|GO:0006274 AM378_06140 5175960fb4823fd3b0ff2b30b0e64e09 312 Hamap MF_00483 DNA replication terminus site-binding protein [tus]. 1 309 46.996 T 15-10-2018 IPR008865 DNA replication terminus site-binding protein GO:0003677|GO:0005737|GO:0006274 AM378_06140 5175960fb4823fd3b0ff2b30b0e64e09 312 Gene3D G3DSA:3.50.14.10 13 281 4.4E-118 T 15-10-2018 IPR036381 Replication terminator Tus, domain 1 GO:0003677|GO:0005737|GO:0006274 AM378_06140 5175960fb4823fd3b0ff2b30b0e64e09 312 SUPERFAMILY SSF56596 6 307 6.93E-115 T 15-10-2018 IPR036384 Replication terminator Tus superfamily GO:0003677|GO:0005737|GO:0006274 AM378_11450 8ad4d6d076e2f29822218a07d8ba064e 536 Pfam PF00005 ABC transporter 26 184 3.8E-27 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM378_11450 8ad4d6d076e2f29822218a07d8ba064e 536 Pfam PF00005 ABC transporter 309 460 5.4E-30 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM378_11450 8ad4d6d076e2f29822218a07d8ba064e 536 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 236 259 3.8E-4 T 15-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AM378_11450 8ad4d6d076e2f29822218a07d8ba064e 536 Gene3D G3DSA:3.40.50.300 280 536 9.9E-82 T 15-10-2018 AM378_11450 8ad4d6d076e2f29822218a07d8ba064e 536 Gene3D G3DSA:3.40.50.300 3 272 2.5E-80 T 15-10-2018 AM378_11450 8ad4d6d076e2f29822218a07d8ba064e 536 SUPERFAMILY SSF52540 5 256 1.25E-63 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_11450 8ad4d6d076e2f29822218a07d8ba064e 536 ProSitePatterns PS00211 ABC transporters family signature. 432 446 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM378_11450 8ad4d6d076e2f29822218a07d8ba064e 536 SUPERFAMILY SSF52540 282 531 9.58E-66 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_11450 8ad4d6d076e2f29822218a07d8ba064e 536 ProSitePatterns PS00211 ABC transporters family signature. 157 171 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM378_11450 8ad4d6d076e2f29822218a07d8ba064e 536 SMART SM00382 34 234 1.3E-15 T 15-10-2018 IPR003593 AAA+ ATPase domain AM378_11450 8ad4d6d076e2f29822218a07d8ba064e 536 SMART SM00382 318 508 7.9E-18 T 15-10-2018 IPR003593 AAA+ ATPase domain AM378_15740 0b9ca508a470bff2953bad9df0b8389c 304 Gene3D G3DSA:3.40.50.1820 37 303 9.1E-72 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold AM378_15740 0b9ca508a470bff2953bad9df0b8389c 304 Pfam PF00756 Putative esterase 60 237 8.7E-18 T 15-10-2018 IPR000801 Putative esterase Reactome: R-HSA-156590 AM378_15740 0b9ca508a470bff2953bad9df0b8389c 304 SUPERFAMILY SSF53474 40 297 7.08E-53 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold AM378_12890 0782349d8e31f368d0a67e47d74b9ec0 153 ProSitePatterns PS00519 AsnC-type HTH domain signature. 19 45 - T 15-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site AM378_12890 0782349d8e31f368d0a67e47d74b9ec0 153 SUPERFAMILY SSF46785 1 61 2.35E-20 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM378_12890 0782349d8e31f368d0a67e47d74b9ec0 153 SMART SM00344 1 110 1.6E-48 T 15-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 AM378_12890 0782349d8e31f368d0a67e47d74b9ec0 153 Pfam PF01037 Lrp/AsnC ligand binding domain 67 141 1.6E-19 T 15-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain AM378_12890 0782349d8e31f368d0a67e47d74b9ec0 153 SUPERFAMILY SSF54909 61 146 3.89E-18 T 15-10-2018 IPR011008 Dimeric alpha-beta barrel AM378_12890 0782349d8e31f368d0a67e47d74b9ec0 153 Gene3D G3DSA:3.30.70.920 55 137 7.0E-21 T 15-10-2018 AM378_12890 0782349d8e31f368d0a67e47d74b9ec0 153 Pfam PF13412 Winged helix-turn-helix DNA-binding 1 48 8.7E-22 T 15-10-2018 AM378_12890 0782349d8e31f368d0a67e47d74b9ec0 153 Gene3D G3DSA:1.10.10.10 1 54 2.4E-26 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_12890 0782349d8e31f368d0a67e47d74b9ec0 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 17 28 2.2E-19 T 15-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 AM378_12890 0782349d8e31f368d0a67e47d74b9ec0 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 1 17 2.2E-19 T 15-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 AM378_12890 0782349d8e31f368d0a67e47d74b9ec0 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 28 47 2.2E-19 T 15-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 AM378_02255 e3b9460adcf7b578048ab45e146097a9 295 Pfam PF00892 EamA-like transporter family 150 279 6.5E-18 T 15-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AM378_02255 e3b9460adcf7b578048ab45e146097a9 295 SUPERFAMILY SSF103481 48 138 2.22E-5 T 15-10-2018 AM378_02255 e3b9460adcf7b578048ab45e146097a9 295 SUPERFAMILY SSF103481 187 280 8.63E-11 T 15-10-2018 AM378_04215 740f504da8fcd572b20ddcd6ddf04eb9 412 Gene3D G3DSA:1.20.1250.20 10 197 5.0E-37 T 15-10-2018 AM378_04215 740f504da8fcd572b20ddcd6ddf04eb9 412 Hamap MF_01528 Multidrug resistance protein MdtG [mdtG]. 1 404 46.439 T 15-10-2018 IPR023692 Multidrug resistance protein MdtG GO:0005215|GO:0005886 AM378_04215 740f504da8fcd572b20ddcd6ddf04eb9 412 PRINTS PR01035 Tetracycline resistance protein signature 23 39 8.2E-13 T 15-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AM378_04215 740f504da8fcd572b20ddcd6ddf04eb9 412 PRINTS PR01035 Tetracycline resistance protein signature 85 109 8.2E-13 T 15-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AM378_04215 740f504da8fcd572b20ddcd6ddf04eb9 412 PRINTS PR01035 Tetracycline resistance protein signature 346 369 8.2E-13 T 15-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AM378_04215 740f504da8fcd572b20ddcd6ddf04eb9 412 PRINTS PR01035 Tetracycline resistance protein signature 142 164 8.2E-13 T 15-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AM378_04215 740f504da8fcd572b20ddcd6ddf04eb9 412 PRINTS PR01035 Tetracycline resistance protein signature 311 331 8.2E-13 T 15-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AM378_04215 740f504da8fcd572b20ddcd6ddf04eb9 412 PRINTS PR01035 Tetracycline resistance protein signature 112 133 8.2E-13 T 15-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AM378_04215 740f504da8fcd572b20ddcd6ddf04eb9 412 SUPERFAMILY SSF103473 9 405 6.19E-72 T 15-10-2018 IPR036259 MFS transporter superfamily AM378_04215 740f504da8fcd572b20ddcd6ddf04eb9 412 Pfam PF07690 Major Facilitator Superfamily 18 261 1.2E-36 T 15-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM378_04215 740f504da8fcd572b20ddcd6ddf04eb9 412 Gene3D G3DSA:1.20.1250.20 214 411 1.1E-29 T 15-10-2018 AM378_03895 39ec45b98084920637374a9ef51d95f6 466 Gene3D G3DSA:1.20.1740.10 18 466 3.2E-61 T 15-10-2018 AM378_03895 39ec45b98084920637374a9ef51d95f6 466 Pfam PF00324 Amino acid permease 27 464 2.6E-118 T 15-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 AM378_03895 39ec45b98084920637374a9ef51d95f6 466 ProSitePatterns PS00218 Amino acid permeases signature. 52 82 - T 15-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 AM378_03895 39ec45b98084920637374a9ef51d95f6 466 PIRSF PIRSF006060 2 465 1.1E-69 T 15-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 AM378_15460 bd83a07599a88f71d608f2a732013cd8 555 Gene3D G3DSA:2.60.40.420 388 555 2.2E-47 T 15-10-2018 IPR008972 Cupredoxin AM378_15460 bd83a07599a88f71d608f2a732013cd8 555 Pfam PF07732 Multicopper oxidase 60 167 1.2E-29 T 15-10-2018 IPR011707 Multicopper oxidase, type 3 GO:0005507 AM378_15460 bd83a07599a88f71d608f2a732013cd8 555 Gene3D G3DSA:2.60.40.420 176 326 4.1E-42 T 15-10-2018 IPR008972 Cupredoxin AM378_15460 bd83a07599a88f71d608f2a732013cd8 555 Pfam PF07731 Multicopper oxidase 442 554 9.2E-26 T 15-10-2018 IPR011706 Multicopper oxidase, type 2 GO:0005507|GO:0016491|GO:0055114 AM378_15460 bd83a07599a88f71d608f2a732013cd8 555 Pfam PF00394 Multicopper oxidase 227 298 4.9E-5 T 15-10-2018 IPR001117 Multicopper oxidase, type 1 GO:0055114 AM378_15460 bd83a07599a88f71d608f2a732013cd8 555 SUPERFAMILY SSF49503 172 293 2.77E-28 T 15-10-2018 IPR008972 Cupredoxin AM378_15460 bd83a07599a88f71d608f2a732013cd8 555 SUPERFAMILY SSF49503 439 553 1.93E-27 T 15-10-2018 IPR008972 Cupredoxin AM378_15460 bd83a07599a88f71d608f2a732013cd8 555 SUPERFAMILY SSF49503 33 169 6.19E-31 T 15-10-2018 IPR008972 Cupredoxin AM378_15460 bd83a07599a88f71d608f2a732013cd8 555 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 3 28 4.5E-4 T 15-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal AM378_15460 bd83a07599a88f71d608f2a732013cd8 555 Gene3D G3DSA:2.60.40.420 29 175 5.1E-43 T 15-10-2018 IPR008972 Cupredoxin AM378_15460 bd83a07599a88f71d608f2a732013cd8 555 ProSitePatterns PS00080 Multicopper oxidases signature 2. 536 547 - T 15-10-2018 IPR002355 Multicopper oxidase, copper-binding site GO:0005507 AM378_20815 0a41b19a8c119a826916b1798cf593f4 760 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 743 760 - T 15-10-2018 IPR010917 TonB-dependent receptor, conserved site AM378_20815 0a41b19a8c119a826916b1798cf593f4 760 Pfam PF00593 TonB dependent receptor 287 757 3.7E-56 T 15-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel AM378_20815 0a41b19a8c119a826916b1798cf593f4 760 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 57 - T 15-10-2018 IPR010916 TonB box, conserved site AM378_20815 0a41b19a8c119a826916b1798cf593f4 760 Pfam PF07715 TonB-dependent Receptor Plug Domain 65 179 2.2E-29 T 15-10-2018 IPR012910 TonB-dependent receptor, plug domain AM378_20815 0a41b19a8c119a826916b1798cf593f4 760 SUPERFAMILY SSF56935 50 760 1.83E-135 T 15-10-2018 AM378_20815 0a41b19a8c119a826916b1798cf593f4 760 Gene3D G3DSA:2.170.130.10 40 184 2.2E-47 T 15-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily AM378_20815 0a41b19a8c119a826916b1798cf593f4 760 Gene3D G3DSA:2.40.170.20 190 760 6.1E-218 T 15-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AM378_20815 0a41b19a8c119a826916b1798cf593f4 760 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 66 760 2.8E-119 T 15-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 AM378_06085 2ac1341f998c1561b39cb7d6929a9791 343 SUPERFAMILY SSF53822 65 342 2.55E-60 T 15-10-2018 IPR028082 Periplasmic binding protein-like I AM378_06085 2ac1341f998c1561b39cb7d6929a9791 343 Gene3D G3DSA:3.40.50.2300 66 335 1.8E-63 T 15-10-2018 AM378_06085 2ac1341f998c1561b39cb7d6929a9791 343 Gene3D G3DSA:3.40.50.2300 165 340 1.8E-63 T 15-10-2018 AM378_06085 2ac1341f998c1561b39cb7d6929a9791 343 SUPERFAMILY SSF47413 4 63 1.18E-17 T 15-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AM378_06085 2ac1341f998c1561b39cb7d6929a9791 343 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 64 323 2.1E-58 T 15-10-2018 IPR001761 Periplasmic binding protein/LacI sugar binding domain AM378_06085 2ac1341f998c1561b39cb7d6929a9791 343 ProSitePatterns PS00356 LacI-type HTH domain signature. 8 26 - T 15-10-2018 AM378_06085 2ac1341f998c1561b39cb7d6929a9791 343 Gene3D G3DSA:1.10.260.40 3 63 6.0E-22 T 15-10-2018 AM378_06085 2ac1341f998c1561b39cb7d6929a9791 343 SMART SM00354 5 75 9.0E-33 T 15-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM378_06085 2ac1341f998c1561b39cb7d6929a9791 343 Pfam PF00356 Bacterial regulatory proteins, lacI family 7 52 4.6E-18 T 15-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM378_21555 280c2d15bac9dad9043813ea114eac8d 154 PIRSF PIRSF000368 1 154 4.8E-59 T 15-10-2018 IPR012837 Ribonucleoside-triphosphate reductase activating, anaerobic GO:0005737|GO:0043365|GO:0051539|GO:0055114 AM378_21555 280c2d15bac9dad9043813ea114eac8d 154 ProSitePatterns PS01087 Radical activating enzymes signature. 14 35 - T 15-10-2018 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 AM378_21555 280c2d15bac9dad9043813ea114eac8d 154 SUPERFAMILY SSF102114 24 125 5.23E-7 T 15-10-2018 AM378_21555 280c2d15bac9dad9043813ea114eac8d 154 Gene3D G3DSA:3.20.20.70 2 154 2.4E-20 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM378_21555 280c2d15bac9dad9043813ea114eac8d 154 TIGRFAM TIGR02491 NrdG: anaerobic ribonucleoside-triphosphate reductase activating protein 2 153 2.4E-62 T 15-10-2018 IPR012837 Ribonucleoside-triphosphate reductase activating, anaerobic GO:0005737|GO:0043365|GO:0051539|GO:0055114 AM378_21555 280c2d15bac9dad9043813ea114eac8d 154 Pfam PF13353 4Fe-4S single cluster domain 12 151 2.6E-50 T 15-10-2018 AM378_16895 30c3fdf0a2a8c7276b295bc697d7ac8a 150 PIRSF PIRSF001399 3 149 1.5E-60 T 15-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 AM378_16895 30c3fdf0a2a8c7276b295bc697d7ac8a 150 Pfam PF01220 Dehydroquinase class II 7 142 2.6E-62 T 15-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 AM378_16895 30c3fdf0a2a8c7276b295bc697d7ac8a 150 Hamap MF_00169 3-dehydroquinate dehydratase [aroQ]. 1 150 75.363 T 15-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 AM378_16895 30c3fdf0a2a8c7276b295bc697d7ac8a 150 TIGRFAM TIGR01088 aroQ: 3-dehydroquinate dehydratase, type II 6 145 4.1E-63 T 15-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 AM378_16895 30c3fdf0a2a8c7276b295bc697d7ac8a 150 Gene3D G3DSA:3.40.50.9100 1 150 4.3E-69 T 15-10-2018 IPR036441 Dehydroquinase, class II superfamily GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 AM378_16895 30c3fdf0a2a8c7276b295bc697d7ac8a 150 SUPERFAMILY SSF52304 6 148 6.28E-63 T 15-10-2018 IPR036441 Dehydroquinase, class II superfamily GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 AM378_16895 30c3fdf0a2a8c7276b295bc697d7ac8a 150 ProDom PD004527 LYASE II 3-DEHYDROQUINATE BIOSYNTHESIS DEHYDRATASE TYPE 3-DEHYDROQUINASE DHQASE AMINO AROMATIC 21 149 1.0E-61 T 15-10-2018 AM378_16895 30c3fdf0a2a8c7276b295bc697d7ac8a 150 ProSitePatterns PS01029 Dehydroquinase class II signature. 10 27 - T 15-10-2018 IPR018509 Dehydroquinase, class II, conserved site GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 AM378_21680 df6d500e355b482b105b5c06a3f7ddc3 252 Pfam PF00455 DeoR C terminal sensor domain 75 233 2.6E-48 T 15-10-2018 IPR014036 DeoR C-terminal sensor domain AM378_21680 df6d500e355b482b105b5c06a3f7ddc3 252 Pfam PF08220 DeoR-like helix-turn-helix domain 6 59 5.2E-17 T 15-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AM378_21680 df6d500e355b482b105b5c06a3f7ddc3 252 Gene3D G3DSA:1.10.10.10 1 58 4.8E-8 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_21680 df6d500e355b482b105b5c06a3f7ddc3 252 SUPERFAMILY SSF46785 4 58 8.7E-14 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM378_21680 df6d500e355b482b105b5c06a3f7ddc3 252 SUPERFAMILY SSF100950 75 234 3.54E-32 T 15-10-2018 IPR037171 NagB/RpiA transferase-like AM378_21680 df6d500e355b482b105b5c06a3f7ddc3 252 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 6.6E-7 T 15-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AM378_21680 df6d500e355b482b105b5c06a3f7ddc3 252 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 6.6E-7 T 15-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AM378_21680 df6d500e355b482b105b5c06a3f7ddc3 252 SMART SM01134 73 234 5.2E-63 T 15-10-2018 AM378_21680 df6d500e355b482b105b5c06a3f7ddc3 252 SMART SM00420 6 58 1.5E-17 T 15-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AM378_04715 e84ff8e29bbbcf61aa56aef16ea9f32a 104 SUPERFAMILY SSF46785 5 95 3.68E-27 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM378_04715 e84ff8e29bbbcf61aa56aef16ea9f32a 104 Gene3D G3DSA:1.10.10.10 2 104 6.3E-32 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_04715 e84ff8e29bbbcf61aa56aef16ea9f32a 104 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 54 69 4.0E-14 T 15-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AM378_04715 e84ff8e29bbbcf61aa56aef16ea9f32a 104 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 39 54 4.0E-14 T 15-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AM378_04715 e84ff8e29bbbcf61aa56aef16ea9f32a 104 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 7 22 4.0E-14 T 15-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AM378_04715 e84ff8e29bbbcf61aa56aef16ea9f32a 104 SMART SM00418 5 83 1.2E-22 T 15-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AM378_04715 e84ff8e29bbbcf61aa56aef16ea9f32a 104 Pfam PF12840 Helix-turn-helix domain 5 63 1.0E-15 T 15-10-2018 AM378_16505 56c96ff364512264eb8cb1e8ab943026 217 Gene3D G3DSA:3.40.50.880 1 217 2.3E-91 T 15-10-2018 IPR029062 Class I glutamine amidotransferase-like AM378_16505 56c96ff364512264eb8cb1e8ab943026 217 PIRSF PIRSF006320 1 216 4.9E-100 T 15-10-2018 IPR026041 Glyoxalase ElbB AM378_16505 56c96ff364512264eb8cb1e8ab943026 217 SUPERFAMILY SSF52317 1 216 1.76E-60 T 15-10-2018 IPR029062 Class I glutamine amidotransferase-like AM378_09610 82d8e0e1dd4a56c7e024209e014bf4f2 330 Pfam PF14841 FliG middle domain 114 186 1.3E-24 T 15-10-2018 IPR032779 Flagellar motor switch protein FliG, middle domain AM378_09610 82d8e0e1dd4a56c7e024209e014bf4f2 330 SUPERFAMILY SSF48029 4 103 2.88E-20 T 15-10-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical AM378_09610 82d8e0e1dd4a56c7e024209e014bf4f2 330 SUPERFAMILY SSF48029 114 323 2.22E-62 T 15-10-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical AM378_09610 82d8e0e1dd4a56c7e024209e014bf4f2 330 Gene3D G3DSA:1.10.220.30 88 191 5.2E-26 T 15-10-2018 AM378_09610 82d8e0e1dd4a56c7e024209e014bf4f2 330 PIRSF PIRSF003161 1 330 1.2E-116 T 15-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 AM378_09610 82d8e0e1dd4a56c7e024209e014bf4f2 330 Gene3D G3DSA:1.10.220.30 1 82 1.9E-18 T 15-10-2018 AM378_09610 82d8e0e1dd4a56c7e024209e014bf4f2 330 Pfam PF01706 FliG C-terminal domain 216 322 2.7E-37 T 15-10-2018 IPR023087 Flagellar motor switch protein FliG, C-terminal AM378_09610 82d8e0e1dd4a56c7e024209e014bf4f2 330 PRINTS PR00954 Flagellar motor switch protein FliG signature 224 244 1.7E-72 T 15-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 AM378_09610 82d8e0e1dd4a56c7e024209e014bf4f2 330 PRINTS PR00954 Flagellar motor switch protein FliG signature 32 58 1.7E-72 T 15-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 AM378_09610 82d8e0e1dd4a56c7e024209e014bf4f2 330 PRINTS PR00954 Flagellar motor switch protein FliG signature 246 266 1.7E-72 T 15-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 AM378_09610 82d8e0e1dd4a56c7e024209e014bf4f2 330 PRINTS PR00954 Flagellar motor switch protein FliG signature 270 296 1.7E-72 T 15-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 AM378_09610 82d8e0e1dd4a56c7e024209e014bf4f2 330 PRINTS PR00954 Flagellar motor switch protein FliG signature 3 19 1.7E-72 T 15-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 AM378_09610 82d8e0e1dd4a56c7e024209e014bf4f2 330 PRINTS PR00954 Flagellar motor switch protein FliG signature 193 218 1.7E-72 T 15-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 AM378_09610 82d8e0e1dd4a56c7e024209e014bf4f2 330 PRINTS PR00954 Flagellar motor switch protein FliG signature 113 136 1.7E-72 T 15-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 AM378_09610 82d8e0e1dd4a56c7e024209e014bf4f2 330 Gene3D G3DSA:1.10.220.30 193 330 5.2E-42 T 15-10-2018 AM378_09610 82d8e0e1dd4a56c7e024209e014bf4f2 330 TIGRFAM TIGR00207 fliG: flagellar motor switch protein FliG 2 330 1.5E-142 T 15-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 AM378_09610 82d8e0e1dd4a56c7e024209e014bf4f2 330 Pfam PF14842 FliG N-terminal domain 3 102 3.8E-30 T 15-10-2018 IPR028263 Flagellar motor switch protein FliG, N-terminal domain AM378_12950 2c2bc8c52605dd021812264b99214996 212 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 134 157 - T 15-10-2018 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AM378_12950 2c2bc8c52605dd021812264b99214996 212 TIGRFAM TIGR00639 PurN: phosphoribosylglycinamide formyltransferase 2 191 8.6E-82 T 15-10-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 AM378_12950 2c2bc8c52605dd021812264b99214996 212 Gene3D G3DSA:3.40.50.170 2 212 1.5E-88 T 15-10-2018 AM378_12950 2c2bc8c52605dd021812264b99214996 212 SUPERFAMILY SSF53328 2 206 4.19E-68 T 15-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AM378_12950 2c2bc8c52605dd021812264b99214996 212 Pfam PF00551 Formyl transferase 2 182 1.2E-67 T 15-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AM378_12950 2c2bc8c52605dd021812264b99214996 212 Hamap MF_01930 Phosphoribosylglycinamide formyltransferase [purN]. 3 188 31.922 T 15-10-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 AM378_08175 a732ebed06f9be41a4e71f4b99f49bb6 288 SUPERFAMILY SSF53850 91 281 6.67E-22 T 15-10-2018 AM378_08175 a732ebed06f9be41a4e71f4b99f49bb6 288 SUPERFAMILY SSF46785 4 113 1.22E-19 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM378_08175 a732ebed06f9be41a4e71f4b99f49bb6 288 Gene3D G3DSA:3.40.190.10 97 259 3.7E-40 T 15-10-2018 AM378_08175 a732ebed06f9be41a4e71f4b99f49bb6 288 Gene3D G3DSA:3.40.190.10 163 253 3.7E-40 T 15-10-2018 AM378_08175 a732ebed06f9be41a4e71f4b99f49bb6 288 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 65 2.1E-16 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_08175 a732ebed06f9be41a4e71f4b99f49bb6 288 Pfam PF03466 LysR substrate binding domain 90 256 2.8E-20 T 15-10-2018 IPR005119 LysR, substrate-binding AM378_08175 a732ebed06f9be41a4e71f4b99f49bb6 288 Gene3D G3DSA:1.10.10.10 1 86 1.8E-18 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_07920 6e60f962080518966f51a5216c7f1c13 299 SUPERFAMILY SSF54862 15 157 5.66E-8 T 15-10-2018 AM378_07920 6e60f962080518966f51a5216c7f1c13 299 Gene3D G3DSA:3.20.20.70 50 294 1.1E-54 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM378_07920 6e60f962080518966f51a5216c7f1c13 299 Gene3D G3DSA:3.20.20.70 1 49 1.3E-14 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM378_07920 6e60f962080518966f51a5216c7f1c13 299 Pfam PF04055 Radical SAM superfamily 19 228 9.3E-26 T 15-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AM378_07920 6e60f962080518966f51a5216c7f1c13 299 SUPERFAMILY SSF102114 126 264 2.55E-18 T 15-10-2018 AM378_07920 6e60f962080518966f51a5216c7f1c13 299 PIRSF PIRSF000371 1 297 1.6E-91 T 15-10-2018 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 AM378_07920 6e60f962080518966f51a5216c7f1c13 299 TIGRFAM TIGR02494 PFLE_PFLC: glycyl-radical enzyme activating protein 3 286 3.2E-100 T 15-10-2018 AM378_07920 6e60f962080518966f51a5216c7f1c13 299 ProSitePatterns PS01087 Radical activating enzymes signature. 13 34 - T 15-10-2018 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 AM378_07920 6e60f962080518966f51a5216c7f1c13 299 Pfam PF13353 4Fe-4S single cluster domain 12 154 4.2E-11 T 15-10-2018 AM378_10505 d7349ab5771e5a53a8244ecc25ab50af 252 Gene3D G3DSA:2.60.40.10 26 144 4.9E-41 T 15-10-2018 IPR013783 Immunoglobulin-like fold AM378_10505 d7349ab5771e5a53a8244ecc25ab50af 252 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 170 231 8.7E-17 T 15-10-2018 IPR016148 Pili assembly chaperone, C-terminal AM378_10505 d7349ab5771e5a53a8244ecc25ab50af 252 SUPERFAMILY SSF49584 154 244 1.14E-25 T 15-10-2018 IPR036316 Pili assembly chaperone, C-terminal domain superfamily AM378_10505 d7349ab5771e5a53a8244ecc25ab50af 252 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 27 144 3.0E-38 T 15-10-2018 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 AM378_10505 d7349ab5771e5a53a8244ecc25ab50af 252 ProSitePatterns PS00635 Gram-negative pili assembly chaperone signature. 102 119 - T 15-10-2018 IPR018046 Pili assembly chaperone, conserved site AM378_10505 d7349ab5771e5a53a8244ecc25ab50af 252 PRINTS PR00969 Pili chaperone signature 165 180 9.2E-35 T 15-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM378_10505 d7349ab5771e5a53a8244ecc25ab50af 252 PRINTS PR00969 Pili chaperone signature 103 120 9.2E-35 T 15-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM378_10505 d7349ab5771e5a53a8244ecc25ab50af 252 PRINTS PR00969 Pili chaperone signature 126 141 9.2E-35 T 15-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM378_10505 d7349ab5771e5a53a8244ecc25ab50af 252 PRINTS PR00969 Pili chaperone signature 27 36 9.2E-35 T 15-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM378_10505 d7349ab5771e5a53a8244ecc25ab50af 252 PRINTS PR00969 Pili chaperone signature 73 94 9.2E-35 T 15-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM378_10505 d7349ab5771e5a53a8244ecc25ab50af 252 SUPERFAMILY SSF49354 27 144 2.38E-39 T 15-10-2018 IPR008962 PapD-like superfamily AM378_10505 d7349ab5771e5a53a8244ecc25ab50af 252 Gene3D G3DSA:2.60.40.10 150 243 1.5E-24 T 15-10-2018 IPR013783 Immunoglobulin-like fold AM378_04460 9ffbeb2a508077adb58ce52d550725f3 159 SUPERFAMILY SSF46785 1 135 4.99E-21 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM378_04460 9ffbeb2a508077adb58ce52d550725f3 159 Pfam PF02082 Transcriptional regulator 4 83 1.1E-15 T 15-10-2018 IPR000944 Transcription regulator Rrf2-type AM378_04460 9ffbeb2a508077adb58ce52d550725f3 159 Gene3D G3DSA:1.10.10.10 1 147 2.1E-29 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_18250 560290542526173e5209785548f801ac 599 SUPERFAMILY SSF47336 518 588 2.49E-13 T 15-10-2018 IPR036736 ACP-like superfamily AM378_18250 560290542526173e5209785548f801ac 599 Gene3D G3DSA:3.30.300.30 403 511 1.7E-27 T 15-10-2018 AM378_18250 560290542526173e5209785548f801ac 599 ProSitePatterns PS00455 Putative AMP-binding domain signature. 152 163 - T 15-10-2018 IPR020845 AMP-binding, conserved site AM378_18250 560290542526173e5209785548f801ac 599 SUPERFAMILY SSF56801 6 533 1.57E-145 T 15-10-2018 AM378_18250 560290542526173e5209785548f801ac 599 Gene3D G3DSA:1.10.1200.10 520 594 1.3E-16 T 15-10-2018 IPR036736 ACP-like superfamily AM378_18250 560290542526173e5209785548f801ac 599 Pfam PF00550 Phosphopantetheine attachment site 524 587 1.8E-11 T 15-10-2018 IPR009081 Phosphopantetheine binding ACP domain AM378_18250 560290542526173e5209785548f801ac 599 Gene3D G3DSA:3.40.50.12780 1 402 8.0E-133 T 15-10-2018 AM378_18250 560290542526173e5209785548f801ac 599 Pfam PF00501 AMP-binding enzyme 11 409 4.7E-97 T 15-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 AM378_18250 560290542526173e5209785548f801ac 599 Pfam PF13193 AMP-binding enzyme C-terminal domain 417 493 3.5E-5 T 15-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain AM378_18250 560290542526173e5209785548f801ac 599 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 32 433 7.8E-130 T 15-10-2018 IPR010071 Amino acid adenylation domain AM378_03925 9cec2423d3d889a9ec264257747250d3 188 Gene3D G3DSA:3.40.630.30 3 187 1.5E-43 T 15-10-2018 AM378_03925 9cec2423d3d889a9ec264257747250d3 188 Pfam PF13302 Acetyltransferase (GNAT) domain 10 150 9.2E-28 T 15-10-2018 IPR000182 GNAT domain AM378_03925 9cec2423d3d889a9ec264257747250d3 188 SUPERFAMILY SSF55729 4 174 1.54E-41 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase AM378_12970 fb93376e54f63fca8e76df57e447f292 121 Gene3D G3DSA:1.10.3510.10 3 121 4.4E-23 T 15-10-2018 IPR023138 NMB0513-like superfamily AM378_12970 fb93376e54f63fca8e76df57e447f292 121 Pfam PF04591 Protein of unknown function, DUF596 54 121 1.1E-21 T 15-10-2018 IPR007670 Protein of unknown function DUF596 AM378_12970 fb93376e54f63fca8e76df57e447f292 121 SUPERFAMILY SSF160472 3 121 1.14E-32 T 15-10-2018 IPR023138 NMB0513-like superfamily AM378_08985 5d4867d61c7cdd8668cf29e62ce5b8bc 313 Gene3D G3DSA:2.60.120.10 36 286 1.3E-60 T 15-10-2018 IPR014710 RmlC-like jelly roll fold AM378_08985 5d4867d61c7cdd8668cf29e62ce5b8bc 313 SUPERFAMILY SSF51182 23 302 1.67E-71 T 15-10-2018 IPR011051 RmlC-like cupin domain superfamily AM378_08985 5d4867d61c7cdd8668cf29e62ce5b8bc 313 Gene3D G3DSA:2.60.120.10 159 260 1.3E-60 T 15-10-2018 IPR014710 RmlC-like jelly roll fold AM378_08985 5d4867d61c7cdd8668cf29e62ce5b8bc 313 Pfam PF02678 Pirin 40 139 2.0E-30 T 15-10-2018 IPR003829 Pirin, N-terminal domain Reactome: R-HSA-8935690 AM378_08985 5d4867d61c7cdd8668cf29e62ce5b8bc 313 Pfam PF05726 Pirin C-terminal cupin domain 191 288 6.9E-19 T 15-10-2018 IPR008778 Pirin, C-terminal domain Reactome: R-HSA-8935690 AM378_08985 5d4867d61c7cdd8668cf29e62ce5b8bc 313 PIRSF PIRSF006232 21 299 2.5E-73 T 15-10-2018 IPR012093 Pirin Reactome: R-HSA-8935690 AM378_09270 e64880bdd01ec8e9d35e63dc6ec2c188 367 Pfam PF01699 Sodium/calcium exchanger protein 43 193 1.2E-13 T 15-10-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 AM378_09270 e64880bdd01ec8e9d35e63dc6ec2c188 367 Pfam PF01699 Sodium/calcium exchanger protein 225 365 3.6E-9 T 15-10-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 AM378_09270 e64880bdd01ec8e9d35e63dc6ec2c188 367 TIGRFAM TIGR00846 caca2: calcium/proton exchanger 12 366 1.2E-105 T 15-10-2018 IPR004713 Calcium/proton exchanger GO:0006812|GO:0008324|GO:0016021|GO:0055085 AM378_14310 26da7ceeb7215e710b34f0b07ad92528 241 Gene3D G3DSA:3.40.1160.10 3 241 1.4E-75 T 15-10-2018 IPR036393 Acetylglutamate kinase-like superfamily AM378_14310 26da7ceeb7215e710b34f0b07ad92528 241 Hamap MF_01220_B Uridylate kinase [pyrH]. 7 240 44.024 T 15-10-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 AM378_14310 26da7ceeb7215e710b34f0b07ad92528 241 PIRSF PIRSF005650 4 241 6.2E-90 T 15-10-2018 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22 AM378_14310 26da7ceeb7215e710b34f0b07ad92528 241 Pfam PF00696 Amino acid kinase family 11 219 2.0E-27 T 15-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 AM378_14310 26da7ceeb7215e710b34f0b07ad92528 241 TIGRFAM TIGR02075 pyrH_bact: UMP kinase 9 240 2.1E-103 T 15-10-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 AM378_14310 26da7ceeb7215e710b34f0b07ad92528 241 SUPERFAMILY SSF53633 7 240 3.01E-73 T 15-10-2018 IPR036393 Acetylglutamate kinase-like superfamily AM378_19050 491511ca70ea2ef7b31ead163bfc6d1e 693 SMART SM00487 265 459 1.6E-29 T 15-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AM378_19050 491511ca70ea2ef7b31ead163bfc6d1e 693 Gene3D G3DSA:2.40.50.140 47 141 9.4E-15 T 15-10-2018 AM378_19050 491511ca70ea2ef7b31ead163bfc6d1e 693 SUPERFAMILY SSF52540 292 653 7.55E-46 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_19050 491511ca70ea2ef7b31ead163bfc6d1e 693 Gene3D G3DSA:3.40.50.300 208 450 1.7E-81 T 15-10-2018 AM378_19050 491511ca70ea2ef7b31ead163bfc6d1e 693 SUPERFAMILY SSF52540 207 453 4.05E-59 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_19050 491511ca70ea2ef7b31ead163bfc6d1e 693 Pfam PF00270 DEAD/DEAH box helicase 293 431 3.6E-19 T 15-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AM378_19050 491511ca70ea2ef7b31ead163bfc6d1e 693 SMART SM00490 505 589 8.7E-23 T 15-10-2018 IPR001650 Helicase, C-terminal AM378_19050 491511ca70ea2ef7b31ead163bfc6d1e 693 TIGRFAM TIGR00643 recG: ATP-dependent DNA helicase RecG 28 664 2.2E-248 T 15-10-2018 IPR004609 ATP-dependent DNA helicase RecG GO:0004003|GO:0006281|GO:0006310 AM378_19050 491511ca70ea2ef7b31ead163bfc6d1e 693 Pfam PF00271 Helicase conserved C-terminal domain 481 588 2.0E-18 T 15-10-2018 IPR001650 Helicase, C-terminal AM378_19050 491511ca70ea2ef7b31ead163bfc6d1e 693 Gene3D G3DSA:3.40.50.300 457 630 1.9E-52 T 15-10-2018 AM378_19050 491511ca70ea2ef7b31ead163bfc6d1e 693 Pfam PF17191 RecG wedge domain 14 171 1.4E-21 T 15-10-2018 IPR033454 RecG, wedge domain AM378_19050 491511ca70ea2ef7b31ead163bfc6d1e 693 SUPERFAMILY SSF50249 9 176 6.28E-45 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold AM378_03885 5e0a554edf3c3edae914c0855787ad79 191 Pfam PF01381 Helix-turn-helix 24 77 1.9E-12 T 15-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM378_03885 5e0a554edf3c3edae914c0855787ad79 191 SUPERFAMILY SSF47413 16 81 1.37E-15 T 15-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AM378_03885 5e0a554edf3c3edae914c0855787ad79 191 Pfam PF07883 Cupin domain 119 186 2.9E-10 T 15-10-2018 IPR013096 Cupin 2, conserved barrel AM378_03885 5e0a554edf3c3edae914c0855787ad79 191 SUPERFAMILY SSF51182 63 186 1.51E-16 T 15-10-2018 IPR011051 RmlC-like cupin domain superfamily AM378_03885 5e0a554edf3c3edae914c0855787ad79 191 Gene3D G3DSA:2.60.120.10 100 191 4.2E-19 T 15-10-2018 IPR014710 RmlC-like jelly roll fold AM378_03885 5e0a554edf3c3edae914c0855787ad79 191 Gene3D G3DSA:1.10.260.40 2 84 2.8E-17 T 15-10-2018 AM378_03885 5e0a554edf3c3edae914c0855787ad79 191 SMART SM00530 22 77 8.6E-14 T 15-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM378_07635 9f9d9e0e095e3386f18be9d7ad6a23f3 276 SUPERFAMILY SSF53850 87 276 1.71E-31 T 15-10-2018 AM378_07635 9f9d9e0e095e3386f18be9d7ad6a23f3 276 SUPERFAMILY SSF46785 2 110 8.57E-21 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM378_07635 9f9d9e0e095e3386f18be9d7ad6a23f3 276 Gene3D G3DSA:3.40.190.10 82 172 2.0E-17 T 15-10-2018 AM378_07635 9f9d9e0e095e3386f18be9d7ad6a23f3 276 Gene3D G3DSA:1.10.10.10 2 81 7.5E-21 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_07635 9f9d9e0e095e3386f18be9d7ad6a23f3 276 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 63 2.9E-15 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_07635 9f9d9e0e095e3386f18be9d7ad6a23f3 276 Pfam PF03466 LysR substrate binding domain 86 275 1.6E-33 T 15-10-2018 IPR005119 LysR, substrate-binding AM378_07635 9f9d9e0e095e3386f18be9d7ad6a23f3 276 Gene3D G3DSA:3.40.190.10 173 248 1.6E-8 T 15-10-2018 AM378_08085 a12d0be0e7763e96e671696ff13bcccc 293 SUPERFAMILY SSF89550 13 287 6.87E-52 T 15-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 AM378_08085 a12d0be0e7763e96e671696ff13bcccc 293 Gene3D G3DSA:3.20.20.140 15 261 3.5E-80 T 15-10-2018 AM378_08085 a12d0be0e7763e96e671696ff13bcccc 293 Gene3D G3DSA:1.10.150.650 109 180 3.5E-80 T 15-10-2018 AM378_08085 a12d0be0e7763e96e671696ff13bcccc 293 Pfam PF02811 PHP domain 15 169 2.6E-7 T 15-10-2018 IPR004013 PHP domain GO:0003824 AM378_08085 a12d0be0e7763e96e671696ff13bcccc 293 SMART SM00481 14 81 7.5E-16 T 15-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal AM378_13120 38bd1cb8aa4f6a474be11568ac675450 450 Gene3D G3DSA:2.40.30.10 355 441 5.2E-12 T 15-10-2018 AM378_13120 38bd1cb8aa4f6a474be11568ac675450 450 Pfam PF01136 Peptidase family U32 76 343 2.0E-95 T 15-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 AM378_13120 38bd1cb8aa4f6a474be11568ac675450 450 Pfam PF16325 Peptidase family U32 C-terminal domain 359 440 2.5E-23 T 15-10-2018 IPR032525 Peptidase family U32, C-terminal AM378_13120 38bd1cb8aa4f6a474be11568ac675450 450 ProSitePatterns PS01276 Peptidase family U32 signature. 162 180 - T 15-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 AM378_18120 2f0af5d792773cb5afd8c076277f2cda 646 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 442 601 6.0E-39 T 15-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 AM378_18120 2f0af5d792773cb5afd8c076277f2cda 646 Gene3D G3DSA:3.40.50.1220 214 386 2.4E-36 T 15-10-2018 AM378_18120 2f0af5d792773cb5afd8c076277f2cda 646 SUPERFAMILY SSF52518 3 208 3.85E-33 T 15-10-2018 IPR029061 Thiamin diphosphate-binding fold AM378_18120 2f0af5d792773cb5afd8c076277f2cda 646 TIGRFAM TIGR04377 myo_inos_iolD: 3,5/4-trihydroxycyclohexa-1,2-dione hydrolase 5 644 1.3E-285 T 15-10-2018 IPR030817 3,5/4-Trihydroxycyclohexa-1,2-dione hydrolase GO:0016823|GO:0019310|GO:0030976 KEGG: 00562+3.7.1.22 AM378_18120 2f0af5d792773cb5afd8c076277f2cda 646 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 478 497 - T 15-10-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 AM378_18120 2f0af5d792773cb5afd8c076277f2cda 646 SUPERFAMILY SSF52518 419 630 4.29E-51 T 15-10-2018 IPR029061 Thiamin diphosphate-binding fold AM378_18120 2f0af5d792773cb5afd8c076277f2cda 646 Gene3D G3DSA:3.40.50.970 414 615 9.2E-44 T 15-10-2018 AM378_18120 2f0af5d792773cb5afd8c076277f2cda 646 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 20 196 1.3E-32 T 15-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 AM378_18120 2f0af5d792773cb5afd8c076277f2cda 646 SUPERFAMILY SSF52467 185 368 5.34E-41 T 15-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily AM378_18120 2f0af5d792773cb5afd8c076277f2cda 646 Gene3D G3DSA:3.40.50.970 3 208 3.5E-33 T 15-10-2018 AM378_18120 2f0af5d792773cb5afd8c076277f2cda 646 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 220 353 1.8E-32 T 15-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 AM378_11070 649ff304185896601ffcf0642a3bf557 579 Pfam PF14535 AMP-binding enzyme C-terminal domain 465 555 1.1E-6 T 15-10-2018 IPR028154 AMP-dependent ligase, C-terminal AM378_11070 649ff304185896601ffcf0642a3bf557 579 Gene3D G3DSA:3.30.300.30 458 567 9.3E-34 T 15-10-2018 AM378_11070 649ff304185896601ffcf0642a3bf557 579 Pfam PF00501 AMP-binding enzyme 47 464 6.1E-74 T 15-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 AM378_11070 649ff304185896601ffcf0642a3bf557 579 SUPERFAMILY SSF56801 19 564 2.62E-98 T 15-10-2018 AM378_11070 649ff304185896601ffcf0642a3bf557 579 Gene3D G3DSA:3.40.50.12780 1 456 3.9E-176 T 15-10-2018 AM378_15040 aaae82341a9c5f46d7f7aed32bafa285 438 Gene3D G3DSA:3.40.350.10 1 171 1.5E-63 T 15-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal AM378_15040 aaae82341a9c5f46d7f7aed32bafa285 438 SUPERFAMILY SSF55920 175 434 2.22E-86 T 15-10-2018 IPR036005 Creatinase/aminopeptidase-like AM378_15040 aaae82341a9c5f46d7f7aed32bafa285 438 ProSitePatterns PS00491 Aminopeptidase P and proline dipeptidase signature. 348 360 - T 15-10-2018 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site AM378_15040 aaae82341a9c5f46d7f7aed32bafa285 438 Pfam PF00557 Metallopeptidase family M24 181 412 2.9E-65 T 15-10-2018 IPR000994 Peptidase M24 AM378_15040 aaae82341a9c5f46d7f7aed32bafa285 438 Pfam PF05195 Aminopeptidase P, N-terminal domain 6 126 2.2E-36 T 15-10-2018 IPR007865 Aminopeptidase P, N-terminal GO:0004177|GO:0030145 AM378_15040 aaae82341a9c5f46d7f7aed32bafa285 438 PRINTS PR00599 Methionine aminopeptidase-1 signature 253 269 7.1E-6 T 15-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 AM378_15040 aaae82341a9c5f46d7f7aed32bafa285 438 PRINTS PR00599 Methionine aminopeptidase-1 signature 371 383 7.1E-6 T 15-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 AM378_15040 aaae82341a9c5f46d7f7aed32bafa285 438 SUPERFAMILY SSF53092 2 174 3.98E-53 T 15-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal AM378_15040 aaae82341a9c5f46d7f7aed32bafa285 438 SMART SM01011 1 136 9.1E-60 T 15-10-2018 IPR007865 Aminopeptidase P, N-terminal GO:0004177|GO:0030145 AM378_15040 aaae82341a9c5f46d7f7aed32bafa285 438 Gene3D G3DSA:3.90.230.10 172 437 6.9E-105 T 15-10-2018 AM378_21135 796e6a646b36e97c6d6c11e49eb8b7f6 150 SUPERFAMILY SSF55658 1 57 4.01E-19 T 15-10-2018 IPR009027 Ribosomal protein L9/RNase H1, N-terminal AM378_21135 796e6a646b36e97c6d6c11e49eb8b7f6 150 Pfam PF03948 Ribosomal protein L9, C-terminal domain 64 148 1.5E-24 T 15-10-2018 IPR020069 Ribosomal protein L9, C-terminal AM378_21135 796e6a646b36e97c6d6c11e49eb8b7f6 150 Hamap MF_00503 50S ribosomal protein L9 [rplI]. 1 149 25.29 T 15-10-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM378_21135 796e6a646b36e97c6d6c11e49eb8b7f6 150 Pfam PF01281 Ribosomal protein L9, N-terminal domain 1 45 5.5E-22 T 15-10-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM378_21135 796e6a646b36e97c6d6c11e49eb8b7f6 150 TIGRFAM TIGR00158 L9: ribosomal protein bL9 1 149 3.2E-58 T 15-10-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM378_21135 796e6a646b36e97c6d6c11e49eb8b7f6 150 Gene3D G3DSA:3.10.430.100 61 149 1.2E-30 T 15-10-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily AM378_21135 796e6a646b36e97c6d6c11e49eb8b7f6 150 Gene3D G3DSA:3.40.5.10 1 50 5.1E-25 T 15-10-2018 IPR036935 Ribosomal protein L9, N-terminal domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM378_21135 796e6a646b36e97c6d6c11e49eb8b7f6 150 SUPERFAMILY SSF55653 60 149 3.92E-25 T 15-10-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily AM378_21135 796e6a646b36e97c6d6c11e49eb8b7f6 150 ProSitePatterns PS00651 Ribosomal protein L9 signature. 13 40 - T 15-10-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM378_12390 5038a491a9fd1f40440315d36fcad4d1 553 Gene3D G3DSA:3.40.50.1220 189 344 1.2E-39 T 15-10-2018 AM378_12390 5038a491a9fd1f40440315d36fcad4d1 553 Gene3D G3DSA:3.40.50.970 358 543 1.9E-59 T 15-10-2018 AM378_12390 5038a491a9fd1f40440315d36fcad4d1 553 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 394 528 2.9E-18 T 15-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 AM378_12390 5038a491a9fd1f40440315d36fcad4d1 553 PIRSF PIRSF036565 1 552 8.8E-203 T 15-10-2018 IPR012110 Thiamine pyrophosphate (TPP)-dependent enzyme GO:0016831 AM378_12390 5038a491a9fd1f40440315d36fcad4d1 553 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 199 323 1.1E-17 T 15-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 AM378_12390 5038a491a9fd1f40440315d36fcad4d1 553 Gene3D G3DSA:3.40.50.970 1 183 3.3E-76 T 15-10-2018 AM378_12390 5038a491a9fd1f40440315d36fcad4d1 553 SUPERFAMILY SSF52518 5 184 1.98E-43 T 15-10-2018 IPR029061 Thiamin diphosphate-binding fold AM378_12390 5038a491a9fd1f40440315d36fcad4d1 553 SUPERFAMILY SSF52467 167 334 2.32E-29 T 15-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily AM378_12390 5038a491a9fd1f40440315d36fcad4d1 553 SUPERFAMILY SSF52518 356 540 1.4E-44 T 15-10-2018 IPR029061 Thiamin diphosphate-binding fold AM378_12390 5038a491a9fd1f40440315d36fcad4d1 553 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 6 178 2.0E-34 T 15-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 AM378_12390 5038a491a9fd1f40440315d36fcad4d1 553 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 418 437 - T 15-10-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 AM378_06230 8d5c3649bb631f71cf07af66eba00f16 249 Pfam PF00106 short chain dehydrogenase 2 187 2.1E-54 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_06230 8d5c3649bb631f71cf07af66eba00f16 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 147 166 1.1E-8 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_06230 8d5c3649bb631f71cf07af66eba00f16 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 127 135 1.1E-8 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_06230 8d5c3649bb631f71cf07af66eba00f16 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 73 84 1.1E-8 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_06230 8d5c3649bb631f71cf07af66eba00f16 249 SUPERFAMILY SSF51735 3 229 3.34E-63 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily AM378_06230 8d5c3649bb631f71cf07af66eba00f16 249 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 134 162 - T 15-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AM378_06230 8d5c3649bb631f71cf07af66eba00f16 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 202 222 4.6E-21 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_06230 8d5c3649bb631f71cf07af66eba00f16 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 168 185 4.6E-21 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_06230 8d5c3649bb631f71cf07af66eba00f16 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 2 19 4.6E-21 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_06230 8d5c3649bb631f71cf07af66eba00f16 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 73 84 4.6E-21 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_06230 8d5c3649bb631f71cf07af66eba00f16 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 147 166 4.6E-21 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_06230 8d5c3649bb631f71cf07af66eba00f16 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 121 137 4.6E-21 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_06230 8d5c3649bb631f71cf07af66eba00f16 249 Gene3D G3DSA:3.40.50.720 2 235 1.8E-68 T 15-10-2018 AM378_02940 d55463a2bf3d07de79a797718c9fa756 310 Gene3D G3DSA:3.40.800.10 1 309 3.0E-123 T 15-10-2018 AM378_02940 d55463a2bf3d07de79a797718c9fa756 310 ProSitePatterns PS01053 Arginase family signature. 235 256 - T 15-10-2018 IPR020855 Ureohydrolase, manganese-binding site GO:0016813|GO:0046872 AM378_02940 d55463a2bf3d07de79a797718c9fa756 310 SUPERFAMILY SSF52768 11 307 2.16E-103 T 15-10-2018 IPR023696 Ureohydrolase domain superfamily AM378_02940 d55463a2bf3d07de79a797718c9fa756 310 Pfam PF00491 Arginase family 33 304 9.0E-91 T 15-10-2018 IPR006035 Ureohydrolase GO:0046872 AM378_02940 d55463a2bf3d07de79a797718c9fa756 310 TIGRFAM TIGR01230 agmatinase: agmatinase 33 305 5.5E-62 T 15-10-2018 IPR005925 Agmatinase-related KEGG: 00330+3.5.3.11|MetaCyc: PWY-40|MetaCyc: PWY-6305|Reactome: R-HSA-351143 AM378_02940 d55463a2bf3d07de79a797718c9fa756 310 PIRSF PIRSF036979 11 310 3.3E-103 T 15-10-2018 IPR006035 Ureohydrolase GO:0046872 AM378_02940 d55463a2bf3d07de79a797718c9fa756 310 PRINTS PR00116 Arginase signature 119 134 1.6E-14 T 15-10-2018 IPR006035 Ureohydrolase GO:0046872 AM378_02940 d55463a2bf3d07de79a797718c9fa756 310 PRINTS PR00116 Arginase signature 232 261 1.6E-14 T 15-10-2018 IPR006035 Ureohydrolase GO:0046872 AM378_14600 91c51bd9f5b6a432c82f4a6c69765bfe 235 Gene3D G3DSA:1.25.40.10 34 125 2.4E-5 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AM378_19895 6300705d6003292b58dcd5bfe4a8e79e 326 SUPERFAMILY SSF52540 3 253 6.95E-65 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_19895 6300705d6003292b58dcd5bfe4a8e79e 326 Pfam PF00005 ABC transporter 24 181 1.2E-27 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM378_19895 6300705d6003292b58dcd5bfe4a8e79e 326 SMART SM00382 32 231 4.0E-13 T 15-10-2018 IPR003593 AAA+ ATPase domain AM378_19895 6300705d6003292b58dcd5bfe4a8e79e 326 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 233 297 2.4E-18 T 15-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AM378_19895 6300705d6003292b58dcd5bfe4a8e79e 326 Gene3D G3DSA:3.40.50.300 1 321 6.2E-95 T 15-10-2018 AM378_19895 6300705d6003292b58dcd5bfe4a8e79e 326 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 231 315 1.2E-25 T 15-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AM378_19895 6300705d6003292b58dcd5bfe4a8e79e 326 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM378_03025 f54c02d6fed72d2e9d1b159a9a6d19d4 844 Pfam PF13954 PapC N-terminal domain 36 180 6.4E-40 T 15-10-2018 IPR025885 PapC, N-terminal domain GO:0005515 AM378_03025 f54c02d6fed72d2e9d1b159a9a6d19d4 844 SUPERFAMILY SSF141729 35 155 4.71E-31 T 15-10-2018 IPR037224 PapC, N-terminal domain superfamily GO:0005515 AM378_03025 f54c02d6fed72d2e9d1b159a9a6d19d4 844 Gene3D G3DSA:3.10.20.410 35 157 2.8E-22 T 15-10-2018 AM378_03025 f54c02d6fed72d2e9d1b159a9a6d19d4 844 ProSitePatterns PS01151 Fimbrial biogenesis outer membrane usher protein signature. 314 324 - T 15-10-2018 IPR018030 Fimbrial membrane usher, conserved site AM378_03025 f54c02d6fed72d2e9d1b159a9a6d19d4 844 Gene3D G3DSA:2.60.40.2070 755 833 1.4E-27 T 15-10-2018 AM378_03025 f54c02d6fed72d2e9d1b159a9a6d19d4 844 Pfam PF13953 PapC C-terminal domain 758 815 9.4E-14 T 15-10-2018 IPR025949 PapC-like, C-terminal domain AM378_03025 f54c02d6fed72d2e9d1b159a9a6d19d4 844 Pfam PF00577 Outer membrane usher protein 197 746 2.3E-192 T 15-10-2018 IPR000015 Outer membrane usher protein GO:0009297|GO:0015473|GO:0016020 AM378_03025 f54c02d6fed72d2e9d1b159a9a6d19d4 844 Gene3D G3DSA:2.60.40.2610 659 751 1.1E-12 T 15-10-2018 AM378_03025 f54c02d6fed72d2e9d1b159a9a6d19d4 844 Gene3D G3DSA:2.60.40.3110 272 360 2.6E-29 T 15-10-2018 AM378_06690 9f4e1d2bfc9b2b174e1e77e081e7f523 464 PRINTS PR01036 Tetracycline resistance protein TetB signature 107 127 2.7E-13 T 15-10-2018 AM378_06690 9f4e1d2bfc9b2b174e1e77e081e7f523 464 PRINTS PR01036 Tetracycline resistance protein TetB signature 137 161 2.7E-13 T 15-10-2018 AM378_06690 9f4e1d2bfc9b2b174e1e77e081e7f523 464 PRINTS PR01036 Tetracycline resistance protein TetB signature 301 325 2.7E-13 T 15-10-2018 AM378_06690 9f4e1d2bfc9b2b174e1e77e081e7f523 464 PRINTS PR01036 Tetracycline resistance protein TetB signature 398 417 2.7E-13 T 15-10-2018 AM378_06690 9f4e1d2bfc9b2b174e1e77e081e7f523 464 PRINTS PR01036 Tetracycline resistance protein TetB signature 16 40 2.7E-13 T 15-10-2018 AM378_06690 9f4e1d2bfc9b2b174e1e77e081e7f523 464 Pfam PF07690 Major Facilitator Superfamily 18 407 2.1E-53 T 15-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM378_06690 9f4e1d2bfc9b2b174e1e77e081e7f523 464 Gene3D G3DSA:1.20.1720.10 13 230 2.0E-51 T 15-10-2018 AM378_06690 9f4e1d2bfc9b2b174e1e77e081e7f523 464 Gene3D G3DSA:1.20.1250.20 255 455 1.9E-21 T 15-10-2018 AM378_06690 9f4e1d2bfc9b2b174e1e77e081e7f523 464 SUPERFAMILY SSF103473 12 458 4.71E-66 T 15-10-2018 IPR036259 MFS transporter superfamily AM378_20765 882937a56750384bd519b4cc4f9cdc84 550 Gene3D G3DSA:1.20.1730.10 50 545 1.1E-60 T 15-10-2018 IPR038377 Sodium/glucose symporter superfamily AM378_20765 882937a56750384bd519b4cc4f9cdc84 550 Hamap MF_01426 Cation/acetate symporter ActP [actP]. 1 550 51.535 T 15-10-2018 IPR014083 Cation/acetate symporter ActP GO:0005887|GO:0015123|GO:0043879 AM378_20765 882937a56750384bd519b4cc4f9cdc84 550 ProSitePatterns PS00456 Sodium:solute symporter family signature 1. 178 203 - T 15-10-2018 IPR018212 Sodium/solute symporter, conserved site AM378_20765 882937a56750384bd519b4cc4f9cdc84 550 Pfam PF00474 Sodium:solute symporter family 63 469 4.5E-128 T 15-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 AM378_20765 882937a56750384bd519b4cc4f9cdc84 550 TIGRFAM TIGR02711 symport_actP: cation/acetate symporter ActP 5 550 0.0 T 15-10-2018 IPR014083 Cation/acetate symporter ActP GO:0005887|GO:0015123|GO:0043879 AM378_20765 882937a56750384bd519b4cc4f9cdc84 550 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 63 467 3.2E-63 T 15-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 AM378_20765 882937a56750384bd519b4cc4f9cdc84 550 ProSitePatterns PS00457 Sodium:solute symporter family signature 2. 451 471 - T 15-10-2018 IPR018212 Sodium/solute symporter, conserved site AM378_18975 13065886b926d63c5e8ae9b4cedb0e4f 227 Gene3D G3DSA:3.40.140.10 104 227 1.9E-44 T 15-10-2018 AM378_18975 13065886b926d63c5e8ae9b4cedb0e4f 227 SUPERFAMILY SSF47781 20 90 1.02E-9 T 15-10-2018 IPR010994 RuvA domain 2-like AM378_18975 13065886b926d63c5e8ae9b4cedb0e4f 227 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 176 181 - T 15-10-2018 IPR020891 Uncharacterised protein family UPF0758, conserved site AM378_18975 13065886b926d63c5e8ae9b4cedb0e4f 227 Pfam PF04002 RadC-like JAB domain 108 225 2.4E-44 T 15-10-2018 IPR025657 RadC-like JAB domain AM378_18975 13065886b926d63c5e8ae9b4cedb0e4f 227 TIGRFAM TIGR00608 radc: DNA repair protein RadC 15 227 1.0E-82 T 15-10-2018 IPR001405 Uncharacterised protein family UPF0758 AM378_18975 13065886b926d63c5e8ae9b4cedb0e4f 227 Hamap MF_00018 UPF0758 protein YicR [yicR]. 7 227 52.634 T 15-10-2018 IPR022820 Uncharacterised protein family UPF0758, YicR subfamily AM378_17495 41b1f25fa34f86b5ca60f1aae5023954 63 SUPERFAMILY SSF46561 1 61 1.07E-21 T 15-10-2018 IPR036049 Ribosomal protein L29/L35 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM378_17495 41b1f25fa34f86b5ca60f1aae5023954 63 TIGRFAM TIGR00012 L29: ribosomal protein uL29 5 60 1.6E-22 T 15-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM378_17495 41b1f25fa34f86b5ca60f1aae5023954 63 Gene3D G3DSA:1.10.287.310 1 63 1.9E-30 T 15-10-2018 AM378_17495 41b1f25fa34f86b5ca60f1aae5023954 63 ProSitePatterns PS00579 Ribosomal protein L29 signature. 39 53 - T 15-10-2018 IPR018254 Ribosomal protein L29, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM378_17495 41b1f25fa34f86b5ca60f1aae5023954 63 Pfam PF00831 Ribosomal L29 protein 4 60 3.8E-23 T 15-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM378_17495 41b1f25fa34f86b5ca60f1aae5023954 63 Hamap MF_00374 50S ribosomal protein L29 [rpmC]. 1 60 18.797 T 15-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM378_16405 8b298a796b669fc87c51c4ab057420e5 432 Gene3D G3DSA:1.20.1250.20 1 199 4.2E-46 T 15-10-2018 AM378_16405 8b298a796b669fc87c51c4ab057420e5 432 Pfam PF07690 Major Facilitator Superfamily 16 313 4.8E-49 T 15-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM378_16405 8b298a796b669fc87c51c4ab057420e5 432 Gene3D G3DSA:1.20.1250.20 214 418 1.7E-25 T 15-10-2018 AM378_16405 8b298a796b669fc87c51c4ab057420e5 432 SUPERFAMILY SSF103473 3 413 1.44E-79 T 15-10-2018 IPR036259 MFS transporter superfamily AM378_15645 b28cd56300c9848815713066d599c5a5 90 PIRSF PIRSF029827 1 90 2.9E-43 T 15-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 AM378_15645 b28cd56300c9848815713066d599c5a5 90 SUPERFAMILY SSF111148 1 89 2.09E-39 T 15-10-2018 IPR036766 Fe(II) trafficking protein YggX superfamily GO:0005506 AM378_15645 b28cd56300c9848815713066d599c5a5 90 Gene3D G3DSA:1.10.3880.10 1 90 4.5E-37 T 15-10-2018 IPR036766 Fe(II) trafficking protein YggX superfamily GO:0005506 AM378_15645 b28cd56300c9848815713066d599c5a5 90 ProDom PD029191 TRAFFICKING IRON PROBABLE FE2 YGGX FEII 3D-STRUCTURE OXIDATIVE CONTROL DIRECT 1 76 2.0E-35 T 15-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 AM378_15645 b28cd56300c9848815713066d599c5a5 90 Pfam PF04362 Bacterial Fe(2+) trafficking 1 88 2.7E-39 T 15-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 AM378_15645 b28cd56300c9848815713066d599c5a5 90 Hamap MF_00686 Probable Fe(2+)-trafficking protein [yggX]. 1 88 27.677 T 15-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 AM378_12190 7ae21ed7efbc62108bfdbf65f68953b7 656 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 395 414 6.1E-60 T 15-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 AM378_12190 7ae21ed7efbc62108bfdbf65f68953b7 656 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 190 205 6.1E-60 T 15-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 AM378_12190 7ae21ed7efbc62108bfdbf65f68953b7 656 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 352 369 6.1E-60 T 15-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 AM378_12190 7ae21ed7efbc62108bfdbf65f68953b7 656 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 113 136 6.1E-60 T 15-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 AM378_12190 7ae21ed7efbc62108bfdbf65f68953b7 656 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 4 28 6.1E-60 T 15-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 AM378_12190 7ae21ed7efbc62108bfdbf65f68953b7 656 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 314 329 6.1E-60 T 15-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 AM378_12190 7ae21ed7efbc62108bfdbf65f68953b7 656 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 631 644 6.1E-60 T 15-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 AM378_12190 7ae21ed7efbc62108bfdbf65f68953b7 656 Pfam PF01578 Cytochrome C assembly protein 89 296 3.6E-54 T 15-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 AM378_12190 7ae21ed7efbc62108bfdbf65f68953b7 656 Pfam PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal 316 637 1.2E-130 T 15-10-2018 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal AM378_12190 7ae21ed7efbc62108bfdbf65f68953b7 656 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 80 106 1.5E-94 T 15-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AM378_12190 7ae21ed7efbc62108bfdbf65f68953b7 656 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 311 330 1.5E-94 T 15-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AM378_12190 7ae21ed7efbc62108bfdbf65f68953b7 656 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 275 295 1.5E-94 T 15-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AM378_12190 7ae21ed7efbc62108bfdbf65f68953b7 656 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 245 265 1.5E-94 T 15-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AM378_12190 7ae21ed7efbc62108bfdbf65f68953b7 656 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 211 237 1.5E-94 T 15-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AM378_12190 7ae21ed7efbc62108bfdbf65f68953b7 656 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 132 149 1.5E-94 T 15-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AM378_12190 7ae21ed7efbc62108bfdbf65f68953b7 656 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 160 182 1.5E-94 T 15-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AM378_12190 7ae21ed7efbc62108bfdbf65f68953b7 656 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 295 311 1.5E-94 T 15-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AM378_12190 7ae21ed7efbc62108bfdbf65f68953b7 656 TIGRFAM TIGR00353 nrfE: cytochrome c-type biogenesis protein CcmF 53 641 5.2E-283 T 15-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 AM378_07270 0aed9859ba9ab5650bb30c8b19e1b0d7 339 SMART SM00342 244 327 1.4E-22 T 15-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM378_07270 0aed9859ba9ab5650bb30c8b19e1b0d7 339 Gene3D G3DSA:1.10.10.60 223 333 2.0E-28 T 15-10-2018 AM378_07270 0aed9859ba9ab5650bb30c8b19e1b0d7 339 SUPERFAMILY SSF46689 227 278 1.76E-6 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AM378_07270 0aed9859ba9ab5650bb30c8b19e1b0d7 339 Pfam PF12833 Helix-turn-helix domain 251 329 1.0E-21 T 15-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM378_07270 0aed9859ba9ab5650bb30c8b19e1b0d7 339 Gene3D G3DSA:3.40.50.880 13 215 3.7E-38 T 15-10-2018 IPR029062 Class I glutamine amidotransferase-like AM378_07270 0aed9859ba9ab5650bb30c8b19e1b0d7 339 Pfam PF01965 DJ-1/PfpI family 57 187 4.0E-11 T 15-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 AM378_07270 0aed9859ba9ab5650bb30c8b19e1b0d7 339 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 281 323 - T 15-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AM378_07270 0aed9859ba9ab5650bb30c8b19e1b0d7 339 SUPERFAMILY SSF46689 280 331 8.96E-13 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AM378_07270 0aed9859ba9ab5650bb30c8b19e1b0d7 339 SUPERFAMILY SSF52317 17 205 1.25E-32 T 15-10-2018 IPR029062 Class I glutamine amidotransferase-like AM378_07300 3b5349e8f39792c8e785c5ef12bc48c1 281 PRINTS PR00377 Inositol monophosphatase superfamily signature 183 204 4.0E-31 T 15-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AM378_07300 3b5349e8f39792c8e785c5ef12bc48c1 281 PRINTS PR00377 Inositol monophosphatase superfamily signature 89 105 4.0E-31 T 15-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AM378_07300 3b5349e8f39792c8e785c5ef12bc48c1 281 PRINTS PR00377 Inositol monophosphatase superfamily signature 47 67 4.0E-31 T 15-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AM378_07300 3b5349e8f39792c8e785c5ef12bc48c1 281 PRINTS PR00377 Inositol monophosphatase superfamily signature 138 161 4.0E-31 T 15-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AM378_07300 3b5349e8f39792c8e785c5ef12bc48c1 281 PRINTS PR00377 Inositol monophosphatase superfamily signature 69 85 4.0E-31 T 15-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AM378_07300 3b5349e8f39792c8e785c5ef12bc48c1 281 PRINTS PR00377 Inositol monophosphatase superfamily signature 214 238 4.0E-31 T 15-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AM378_07300 3b5349e8f39792c8e785c5ef12bc48c1 281 Gene3D G3DSA:3.40.190.80 152 266 6.4E-18 T 15-10-2018 AM378_07300 3b5349e8f39792c8e785c5ef12bc48c1 281 Gene3D G3DSA:3.30.540.10 2 147 4.5E-44 T 15-10-2018 AM378_07300 3b5349e8f39792c8e785c5ef12bc48c1 281 Pfam PF00459 Inositol monophosphatase family 11 251 4.3E-51 T 15-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AM378_07300 3b5349e8f39792c8e785c5ef12bc48c1 281 SUPERFAMILY SSF56655 10 263 4.58E-67 T 15-10-2018 AM378_07300 3b5349e8f39792c8e785c5ef12bc48c1 281 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 89 102 - T 15-10-2018 IPR020583 Inositol monophosphatase, metal-binding site AM378_14015 268e08f95af409db89a71ed07e31ab55 228 PIRSF PIRSF006171 4 228 2.5E-64 T 15-10-2018 IPR024187 Signal transduction response regulator, citrate/malate metabolism GO:0000160|GO:0003700 AM378_14015 268e08f95af409db89a71ed07e31ab55 228 SUPERFAMILY SSF52172 6 136 2.85E-30 T 15-10-2018 IPR011006 CheY-like superfamily AM378_14015 268e08f95af409db89a71ed07e31ab55 228 Gene3D G3DSA:3.40.50.12740 6 206 4.0E-26 T 15-10-2018 AM378_14015 268e08f95af409db89a71ed07e31ab55 228 Pfam PF00072 Response regulator receiver domain 8 119 5.6E-21 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM378_14015 268e08f95af409db89a71ed07e31ab55 228 Pfam PF12431 Transcriptional regulator 135 161 6.2E-5 T 15-10-2018 IPR028141 Transcriptional regulator AM378_14015 268e08f95af409db89a71ed07e31ab55 228 SMART SM00448 6 119 5.9E-20 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM378_09925 21404dbf86aaf4e8b17621b4b420bf84 239 PIRSF PIRSF029287 3 227 1.5E-48 T 15-10-2018 IPR017748 T6S-associated protein TagF AM378_09925 21404dbf86aaf4e8b17621b4b420bf84 239 Gene3D G3DSA:3.40.1730.10 9 227 1.5E-41 T 15-10-2018 IPR038225 T6S-associated protein TagF superfamily AM378_09925 21404dbf86aaf4e8b17621b4b420bf84 239 TIGRFAM TIGR03373 VI_minor_4: type VI secretion-associated protein, BMA_A0400 family 12 146 3.0E-32 T 15-10-2018 IPR017748 T6S-associated protein TagF AM378_09925 21404dbf86aaf4e8b17621b4b420bf84 239 Pfam PF09867 Uncharacterized protein conserved in bacteria (DUF2094) 12 146 1.2E-44 T 15-10-2018 IPR017748 T6S-associated protein TagF AM378_06010 e003b06af7228fcfe945a08130ae18d2 361 TIGRFAM TIGR01946 rnfD: electron transport complex, RnfABCDGE type, D subunit 19 360 2.6E-140 T 15-10-2018 IPR011303 Ion-translocating oxidoreductase complex Rnf, subunit D GO:0016021|GO:0022900 AM378_06010 e003b06af7228fcfe945a08130ae18d2 361 Hamap MF_00462 Ion-translocating oxidoreductase complex subunit D [rsxD]. 14 361 28.067 T 15-10-2018 IPR011303 Ion-translocating oxidoreductase complex Rnf, subunit D GO:0016021|GO:0022900 AM378_06010 e003b06af7228fcfe945a08130ae18d2 361 Pfam PF03116 NQR2, RnfD, RnfE family 16 359 1.3E-108 T 15-10-2018 IPR004338 Ion-translocating oxidoreductase NqrB/RnfD GO:0016020|GO:0055085 AM378_05885 165d5f3b3c1d467ea8663e455667ed48 143 ProSitePatterns PS01117 MarR-type HTH domain signature. 62 96 - T 15-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site AM378_05885 165d5f3b3c1d467ea8663e455667ed48 143 SUPERFAMILY SSF46785 4 140 3.02E-32 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM378_05885 165d5f3b3c1d467ea8663e455667ed48 143 Hamap MF_01819 Transcriptional regulator SlyA [slyA]. 1 143 38.159 T 15-10-2018 IPR023071 Transcriptional regulator, SlyA AM378_05885 165d5f3b3c1d467ea8663e455667ed48 143 PRINTS PR00598 Bacterial regulatory protein MarR family signature 47 63 5.0E-26 T 15-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AM378_05885 165d5f3b3c1d467ea8663e455667ed48 143 PRINTS PR00598 Bacterial regulatory protein MarR family signature 64 79 5.0E-26 T 15-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AM378_05885 165d5f3b3c1d467ea8663e455667ed48 143 PRINTS PR00598 Bacterial regulatory protein MarR family signature 83 99 5.0E-26 T 15-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AM378_05885 165d5f3b3c1d467ea8663e455667ed48 143 PRINTS PR00598 Bacterial regulatory protein MarR family signature 113 133 5.0E-26 T 15-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AM378_05885 165d5f3b3c1d467ea8663e455667ed48 143 Gene3D G3DSA:1.10.10.10 1 143 2.8E-37 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_05885 165d5f3b3c1d467ea8663e455667ed48 143 SMART SM00347 22 123 3.3E-27 T 15-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AM378_05885 165d5f3b3c1d467ea8663e455667ed48 143 Pfam PF01047 MarR family 29 87 5.2E-17 T 15-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AM378_11430 dd782a32b63c8444e88e9e141684e9b9 527 Pfam PF12792 CSS motif domain associated with EAL 49 243 1.8E-33 T 15-10-2018 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain AM378_11430 dd782a32b63c8444e88e9e141684e9b9 527 SUPERFAMILY SSF141868 270 522 8.63E-76 T 15-10-2018 IPR035919 EAL domain superfamily AM378_11430 dd782a32b63c8444e88e9e141684e9b9 527 Pfam PF00563 EAL domain 271 505 7.1E-66 T 15-10-2018 IPR001633 EAL domain AM378_11430 dd782a32b63c8444e88e9e141684e9b9 527 SMART SM00052 265 510 2.5E-96 T 15-10-2018 IPR001633 EAL domain AM378_11430 dd782a32b63c8444e88e9e141684e9b9 527 Gene3D G3DSA:3.20.20.450 265 522 3.0E-79 T 15-10-2018 IPR035919 EAL domain superfamily AM378_05470 23385b5cfd4da49ef56a257c6446cbb9 593 SUPERFAMILY SSF51905 6 584 4.42E-50 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AM378_05470 23385b5cfd4da49ef56a257c6446cbb9 593 Pfam PF05199 GMC oxidoreductase 448 573 1.2E-21 T 15-10-2018 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 Reactome: R-HSA-6798163 AM378_05470 23385b5cfd4da49ef56a257c6446cbb9 593 Gene3D G3DSA:3.50.50.60 495 583 3.2E-9 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AM378_05470 23385b5cfd4da49ef56a257c6446cbb9 593 Gene3D G3DSA:3.50.50.60 2 177 2.1E-9 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AM378_05470 23385b5cfd4da49ef56a257c6446cbb9 593 Pfam PF00732 GMC oxidoreductase 202 347 1.3E-8 T 15-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 AM378_05470 23385b5cfd4da49ef56a257c6446cbb9 593 Gene3D G3DSA:3.50.50.60 217 353 5.6E-9 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AM378_05470 23385b5cfd4da49ef56a257c6446cbb9 593 SUPERFAMILY SSF54373 432 504 4.71E-8 T 15-10-2018 AM378_23050 d28d559c8eb237171e485f98a7947ee6 446 Pfam PF07690 Major Facilitator Superfamily 31 300 6.9E-37 T 15-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM378_23050 d28d559c8eb237171e485f98a7947ee6 446 Gene3D G3DSA:1.20.1250.20 246 441 2.7E-27 T 15-10-2018 AM378_23050 d28d559c8eb237171e485f98a7947ee6 446 ProSitePatterns PS00216 Sugar transport proteins signature 1. 80 96 - T 15-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AM378_23050 d28d559c8eb237171e485f98a7947ee6 446 SUPERFAMILY SSF103473 4 436 2.75E-81 T 15-10-2018 IPR036259 MFS transporter superfamily AM378_23050 d28d559c8eb237171e485f98a7947ee6 446 Gene3D G3DSA:1.20.1250.20 16 228 1.0E-39 T 15-10-2018 AM378_23050 d28d559c8eb237171e485f98a7947ee6 446 ProSitePatterns PS00217 Sugar transport proteins signature 2. 122 147 - T 15-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AM378_16840 1f04230a3b350ba424cb882225bb2d7f 286 ProSitePatterns PS01227 Uncharacterized protein family UPF0012 signature. 153 173 - T 15-10-2018 IPR001110 Uncharacterised protein family UPF0012, conserved site AM378_16840 1f04230a3b350ba424cb882225bb2d7f 286 Pfam PF00795 Carbon-nitrogen hydrolase 6 254 7.8E-46 T 15-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 AM378_16840 1f04230a3b350ba424cb882225bb2d7f 286 SUPERFAMILY SSF56317 2 267 1.57E-72 T 15-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily AM378_16840 1f04230a3b350ba424cb882225bb2d7f 286 Gene3D G3DSA:3.60.110.10 1 273 1.4E-85 T 15-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily AM378_10320 e8b42a52c216a7f30eaf55a5c9d98b79 325 Gene3D G3DSA:1.20.1260.10 17 325 5.5E-132 T 15-10-2018 IPR012347 Ferritin-like AM378_10320 e8b42a52c216a7f30eaf55a5c9d98b79 325 TIGRFAM TIGR02156 PA_CoA_Oxy1: phenylacetate-CoA oxygenase, PaaG subunit 24 311 4.3E-153 T 15-10-2018 IPR011881 1,2-phenylacetyl-CoA epoxidase, subunit A GO:0010124|GO:0097266 KEGG: 00360+1.14.13.149 AM378_10320 e8b42a52c216a7f30eaf55a5c9d98b79 325 Pfam PF05138 Phenylacetic acid catabolic protein 34 308 2.4E-99 T 15-10-2018 IPR007814 1,2-phenylacetyl-CoA epoxidase, subunit A/C GO:0010124 AM378_10320 e8b42a52c216a7f30eaf55a5c9d98b79 325 SUPERFAMILY SSF47240 44 287 6.69E-81 T 15-10-2018 IPR009078 Ferritin-like superfamily AM378_17730 73e9ad3cbb854aab28a0a4a74cb44534 241 Gene3D G3DSA:2.40.50.1020 131 239 5.2E-10 T 15-10-2018 AM378_17730 73e9ad3cbb854aab28a0a4a74cb44534 241 SMART SM00448 2 112 2.7E-27 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM378_17730 73e9ad3cbb854aab28a0a4a74cb44534 241 Pfam PF04397 LytTr DNA-binding domain 144 237 1.2E-22 T 15-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 AM378_17730 73e9ad3cbb854aab28a0a4a74cb44534 241 SUPERFAMILY SSF52172 1 123 1.02E-32 T 15-10-2018 IPR011006 CheY-like superfamily AM378_17730 73e9ad3cbb854aab28a0a4a74cb44534 241 Pfam PF00072 Response regulator receiver domain 5 112 1.2E-24 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM378_17730 73e9ad3cbb854aab28a0a4a74cb44534 241 SMART SM00850 143 238 2.2E-27 T 15-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 AM378_17730 73e9ad3cbb854aab28a0a4a74cb44534 241 Gene3D G3DSA:3.40.50.2300 1 126 1.1E-30 T 15-10-2018 AM378_06570 2a6b28821b0ea6da670ef1e10863764d 298 PIRSF PIRSF016184 8 298 3.9E-73 T 15-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 AM378_06570 2a6b28821b0ea6da670ef1e10863764d 298 TIGRFAM TIGR00654 PhzF_family: phenazine biosynthesis protein, PhzF family 12 277 5.3E-60 T 15-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 AM378_06570 2a6b28821b0ea6da670ef1e10863764d 298 Pfam PF02567 Phenazine biosynthesis-like protein 15 276 3.9E-57 T 15-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 AM378_06570 2a6b28821b0ea6da670ef1e10863764d 298 Gene3D G3DSA:3.10.310.10 13 291 1.1E-80 T 15-10-2018 AM378_06570 2a6b28821b0ea6da670ef1e10863764d 298 Gene3D G3DSA:3.10.310.10 132 290 1.1E-80 T 15-10-2018 AM378_06570 2a6b28821b0ea6da670ef1e10863764d 298 SUPERFAMILY SSF54506 11 296 3.87E-69 T 15-10-2018 AM378_06950 75593d4e09d34473b8744d8e576d7a0b 291 Gene3D G3DSA:1.10.287.470 81 156 2.0E-36 T 15-10-2018 AM378_06950 75593d4e09d34473b8744d8e576d7a0b 291 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 47 241 8.0E-35 T 15-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AM378_06950 75593d4e09d34473b8744d8e576d7a0b 291 Gene3D G3DSA:2.40.30.170 192 248 2.0E-36 T 15-10-2018 AM378_06950 75593d4e09d34473b8744d8e576d7a0b 291 SUPERFAMILY SSF111369 47 240 1.96E-20 T 15-10-2018 AM378_06950 75593d4e09d34473b8744d8e576d7a0b 291 Pfam PF13533 Biotin-lipoyl like 48 95 2.9E-16 T 15-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain AM378_06950 75593d4e09d34473b8744d8e576d7a0b 291 Pfam PF13437 HlyD family secretion protein 157 239 9.2E-10 T 15-10-2018 AM378_06950 75593d4e09d34473b8744d8e576d7a0b 291 Gene3D G3DSA:2.40.50.100 47 191 2.0E-36 T 15-10-2018 AM378_19330 22fbb79f2fe07a55c344ddd36d091f99 318 Gene3D G3DSA:1.10.3720.10 70 316 3.5E-32 T 15-10-2018 IPR035906 MetI-like superfamily AM378_19330 22fbb79f2fe07a55c344ddd36d091f99 318 SUPERFAMILY SSF161098 29 304 8.97E-34 T 15-10-2018 IPR035906 MetI-like superfamily AM378_19330 22fbb79f2fe07a55c344ddd36d091f99 318 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 95 308 5.8E-19 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AM378_19330 22fbb79f2fe07a55c344ddd36d091f99 318 TIGRFAM TIGR02138 phosphate_pstC: phosphate ABC transporter, permease protein PstC 18 311 9.6E-94 T 15-10-2018 IPR011864 Phosphate ABC transporter, permease protein PstC GO:0005315|GO:0006817|GO:0016021 AM378_08850 80318d031d778129204821ca61cae31f 457 Pfam PF04715 Anthranilate synthase component I, N terminal region 19 154 1.1E-26 T 15-10-2018 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AM378_08850 80318d031d778129204821ca61cae31f 457 SUPERFAMILY SSF56322 8 451 4.32E-144 T 15-10-2018 IPR005801 ADC synthase GO:0009058 AM378_08850 80318d031d778129204821ca61cae31f 457 TIGRFAM TIGR00553 pabB: aminodeoxychorismate synthase, component I 107 445 9.0E-130 T 15-10-2018 IPR005802 Para-aminobenzoate synthase, component I GO:0009396 KEGG: 00790+2.6.1.85|MetaCyc: PWY-6543 AM378_08850 80318d031d778129204821ca61cae31f 457 Gene3D G3DSA:3.60.120.10 2 452 7.3E-175 T 15-10-2018 IPR005801 ADC synthase GO:0009058 AM378_08850 80318d031d778129204821ca61cae31f 457 PRINTS PR00095 Anthranilate synthase component I signature 305 318 2.2E-17 T 15-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AM378_08850 80318d031d778129204821ca61cae31f 457 PRINTS PR00095 Anthranilate synthase component I signature 291 304 2.2E-17 T 15-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AM378_08850 80318d031d778129204821ca61cae31f 457 PRINTS PR00095 Anthranilate synthase component I signature 400 414 2.2E-17 T 15-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AM378_08850 80318d031d778129204821ca61cae31f 457 PRINTS PR00095 Anthranilate synthase component I signature 385 399 2.2E-17 T 15-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AM378_08850 80318d031d778129204821ca61cae31f 457 Pfam PF00425 chorismate binding enzyme 189 443 1.1E-94 T 15-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal AM378_07355 b020b3327eef03ce93ae1bcf298e781b 300 SUPERFAMILY SSF53474 17 298 7.62E-76 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold AM378_07355 b020b3327eef03ce93ae1bcf298e781b 300 Pfam PF07859 alpha/beta hydrolase fold 79 282 1.7E-73 T 15-10-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0016787 AM378_07355 b020b3327eef03ce93ae1bcf298e781b 300 Gene3D G3DSA:3.40.50.1820 3 300 1.2E-89 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold AM378_03950 46fe8d66d1d21edb665a16d3dd37ea81 509 Gene3D G3DSA:1.10.1040.50 195 497 1.9E-64 T 15-10-2018 AM378_03950 46fe8d66d1d21edb665a16d3dd37ea81 509 SUPERFAMILY SSF48179 417 497 9.35E-11 T 15-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 AM378_03950 46fe8d66d1d21edb665a16d3dd37ea81 509 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 11 187 4.1E-55 T 15-10-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 AM378_03950 46fe8d66d1d21edb665a16d3dd37ea81 509 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 191 285 1.0E-22 T 15-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 AM378_03950 46fe8d66d1d21edb665a16d3dd37ea81 509 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 423 496 7.7E-9 T 15-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 AM378_03950 46fe8d66d1d21edb665a16d3dd37ea81 509 SUPERFAMILY SSF51735 8 190 1.19E-47 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily AM378_03950 46fe8d66d1d21edb665a16d3dd37ea81 509 SUPERFAMILY SSF48179 190 295 1.02E-22 T 15-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 AM378_03950 46fe8d66d1d21edb665a16d3dd37ea81 509 Gene3D G3DSA:3.40.50.720 9 194 1.5E-59 T 15-10-2018 AM378_03950 46fe8d66d1d21edb665a16d3dd37ea81 509 Gene3D G3DSA:3.30.750.190 294 418 1.9E-64 T 15-10-2018 AM378_10460 7acdaadb80d3dca50a1f80c745533bd3 790 ProSitePatterns PS00364 Bacterial quinoprotein dehydrogenases signature 2. 401 422 - T 15-10-2018 IPR001479 Quinoprotein dehydrogenase, conserved site GO:0030288|GO:0055114 AM378_10460 7acdaadb80d3dca50a1f80c745533bd3 790 TIGRFAM TIGR03074 PQQ_membr_DH: membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family 13 787 0.0 T 15-10-2018 IPR017511 PQQ-dependent membrane bound dehydrogenase GO:0016021|GO:0016614|GO:0048038|GO:0055114 AM378_10460 7acdaadb80d3dca50a1f80c745533bd3 790 SUPERFAMILY SSF50998 158 787 8.77E-157 T 15-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily AM378_10460 7acdaadb80d3dca50a1f80c745533bd3 790 Gene3D G3DSA:2.140.10.10 140 786 6.3E-148 T 15-10-2018 AM378_10460 7acdaadb80d3dca50a1f80c745533bd3 790 Pfam PF01011 PQQ enzyme repeat 354 384 3.6E-4 T 15-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat AM378_10460 7acdaadb80d3dca50a1f80c745533bd3 790 Pfam PF01011 PQQ enzyme repeat 286 315 2.8E-4 T 15-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat AM378_10460 7acdaadb80d3dca50a1f80c745533bd3 790 Pfam PF01011 PQQ enzyme repeat 440 465 1.4E-5 T 15-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat AM378_10460 7acdaadb80d3dca50a1f80c745533bd3 790 Pfam PF01011 PQQ enzyme repeat 719 753 6.3E-5 T 15-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat AM378_10460 7acdaadb80d3dca50a1f80c745533bd3 790 Pfam PF01011 PQQ enzyme repeat 663 696 2.6E-6 T 15-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat AM378_10460 7acdaadb80d3dca50a1f80c745533bd3 790 Pfam PF01011 PQQ enzyme repeat 220 248 5.6E-8 T 15-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat AM378_10460 7acdaadb80d3dca50a1f80c745533bd3 790 SMART SM00564 479 510 800.0 T 15-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AM378_10460 7acdaadb80d3dca50a1f80c745533bd3 790 SMART SM00564 336 377 0.0078 T 15-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AM378_10460 7acdaadb80d3dca50a1f80c745533bd3 790 SMART SM00564 215 246 0.0014 T 15-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AM378_10460 7acdaadb80d3dca50a1f80c745533bd3 790 SMART SM00564 710 743 0.014 T 15-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AM378_07280 46beb3501cdb45672a2c95904c175024 815 SUPERFAMILY SSF50182 634 698 1.96E-15 T 15-10-2018 IPR010920 LSM domain superfamily AM378_07280 46beb3501cdb45672a2c95904c175024 815 Gene3D G3DSA:3.30.70.100 706 794 8.9E-9 T 15-10-2018 AM378_07280 46beb3501cdb45672a2c95904c175024 815 Pfam PF12607 Protein of unknown function (DUF3772) 141 202 5.2E-18 T 15-10-2018 IPR022249 Domain of unknown function DUF3772 AM378_07280 46beb3501cdb45672a2c95904c175024 815 Pfam PF00924 Mechanosensitive ion channel 592 789 2.6E-43 T 15-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 AM378_07280 46beb3501cdb45672a2c95904c175024 815 Gene3D G3DSA:2.30.30.60 649 697 4.2E-13 T 15-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily AM378_07280 46beb3501cdb45672a2c95904c175024 815 SUPERFAMILY SSF82689 707 801 1.05E-13 T 15-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 AM378_07280 46beb3501cdb45672a2c95904c175024 815 SUPERFAMILY SSF82861 549 632 2.35E-10 T 15-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 AM378_07545 102352b61a24e978a9f0581117135d52 316 SUPERFAMILY SSF159871 108 179 3.27E-18 T 15-10-2018 IPR036275 YdgH-like superfamily AM378_07545 102352b61a24e978a9f0581117135d52 316 Pfam PF07338 Protein of unknown function (DUF1471) 34 90 2.8E-20 T 15-10-2018 IPR010854 Domain of unknown function DUF1471 AM378_07545 102352b61a24e978a9f0581117135d52 316 Pfam PF07338 Protein of unknown function (DUF1471) 260 316 8.9E-21 T 15-10-2018 IPR010854 Domain of unknown function DUF1471 AM378_07545 102352b61a24e978a9f0581117135d52 316 Pfam PF07338 Protein of unknown function (DUF1471) 119 175 5.5E-19 T 15-10-2018 IPR010854 Domain of unknown function DUF1471 AM378_07545 102352b61a24e978a9f0581117135d52 316 Gene3D G3DSA:3.30.1660.10 21 90 6.2E-26 T 15-10-2018 IPR025543 Dodecin-like AM378_07545 102352b61a24e978a9f0581117135d52 316 SUPERFAMILY SSF159871 3 94 5.1E-25 T 15-10-2018 IPR036275 YdgH-like superfamily AM378_07545 102352b61a24e978a9f0581117135d52 316 Gene3D G3DSA:3.30.1660.10 244 316 3.0E-30 T 15-10-2018 IPR025543 Dodecin-like AM378_07545 102352b61a24e978a9f0581117135d52 316 Gene3D G3DSA:3.30.1660.10 106 175 1.7E-22 T 15-10-2018 IPR025543 Dodecin-like AM378_07545 102352b61a24e978a9f0581117135d52 316 PIRSF PIRSF014774 1 316 4.9E-189 T 15-10-2018 IPR025539 YdgH protein AM378_07545 102352b61a24e978a9f0581117135d52 316 SUPERFAMILY SSF159871 239 316 2.75E-19 T 15-10-2018 IPR036275 YdgH-like superfamily AM378_06340 55c58c1046989bb8dbfc24e8b9ac9594 157 SMART SM00347 40 140 6.0E-9 T 15-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AM378_06340 55c58c1046989bb8dbfc24e8b9ac9594 157 Pfam PF13463 Winged helix DNA-binding domain 47 113 5.5E-12 T 15-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AM378_06340 55c58c1046989bb8dbfc24e8b9ac9594 157 SUPERFAMILY SSF46785 17 152 3.25E-28 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM378_06340 55c58c1046989bb8dbfc24e8b9ac9594 157 Gene3D G3DSA:1.10.10.10 14 154 3.4E-28 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_14315 9f92eb5de4d4e5595028e2bce017236f 283 ProSitePatterns PS01126 Elongation factor Ts signature 1. 12 27 - T 15-10-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AM378_14315 9f92eb5de4d4e5595028e2bce017236f 283 Gene3D G3DSA:1.10.286.20 187 226 9.7E-25 T 15-10-2018 AM378_14315 9f92eb5de4d4e5595028e2bce017236f 283 ProSitePatterns PS01127 Elongation factor Ts signature 2. 75 85 - T 15-10-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AM378_14315 9f92eb5de4d4e5595028e2bce017236f 283 Pfam PF00889 Elongation factor TS 71 263 3.4E-67 T 15-10-2018 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0006414 Reactome: R-HSA-5389840 AM378_14315 9f92eb5de4d4e5595028e2bce017236f 283 SUPERFAMILY SSF54713 56 139 1.63E-20 T 15-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 AM378_14315 9f92eb5de4d4e5595028e2bce017236f 283 Hamap MF_00050 Elongation factor Ts [tsf]. 1 280 79.691 T 15-10-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AM378_14315 9f92eb5de4d4e5595028e2bce017236f 283 SUPERFAMILY SSF46934 4 54 1.53E-18 T 15-10-2018 IPR009060 UBA-like superfamily GO:0005515 AM378_14315 9f92eb5de4d4e5595028e2bce017236f 283 Gene3D G3DSA:3.30.479.20 57 141 6.4E-33 T 15-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 AM378_14315 9f92eb5de4d4e5595028e2bce017236f 283 TIGRFAM TIGR00116 tsf: translation elongation factor Ts 1 282 2.2E-120 T 15-10-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AM378_14315 9f92eb5de4d4e5595028e2bce017236f 283 SUPERFAMILY SSF54713 142 281 8.18E-54 T 15-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 AM378_14315 9f92eb5de4d4e5595028e2bce017236f 283 Gene3D G3DSA:1.10.8.10 1 56 4.9E-27 T 15-10-2018 AM378_21130 4d776f2becc435db4210658806b3f9df 75 Pfam PF01084 Ribosomal protein S18 19 68 9.1E-25 T 15-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM378_21130 4d776f2becc435db4210658806b3f9df 75 ProDom PD002239 RIBOSOMAL S18 RIBONUCLEOPROTEIN 30S RRNA-BINDING RNA-BINDING CHLOROPLAST PLASTID MITOCHONDRIAL ACETYLATION 21 71 3.0E-22 T 15-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM378_21130 4d776f2becc435db4210658806b3f9df 75 Gene3D G3DSA:4.10.640.10 20 75 4.2E-29 T 15-10-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM378_21130 4d776f2becc435db4210658806b3f9df 75 SUPERFAMILY SSF46911 3 74 7.06E-29 T 15-10-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM378_21130 4d776f2becc435db4210658806b3f9df 75 PRINTS PR00974 Ribosomal protein S18 family signature 38 45 1.3E-18 T 15-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM378_21130 4d776f2becc435db4210658806b3f9df 75 PRINTS PR00974 Ribosomal protein S18 family signature 46 60 1.3E-18 T 15-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM378_21130 4d776f2becc435db4210658806b3f9df 75 PRINTS PR00974 Ribosomal protein S18 family signature 28 38 1.3E-18 T 15-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM378_21130 4d776f2becc435db4210658806b3f9df 75 PRINTS PR00974 Ribosomal protein S18 family signature 60 70 1.3E-18 T 15-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM378_21130 4d776f2becc435db4210658806b3f9df 75 ProSitePatterns PS00057 Ribosomal protein S18 signature. 21 44 - T 15-10-2018 IPR018275 Ribosomal protein S18, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM378_21130 4d776f2becc435db4210658806b3f9df 75 TIGRFAM TIGR00165 S18: ribosomal protein bS18 4 72 8.1E-38 T 15-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM378_21130 4d776f2becc435db4210658806b3f9df 75 Hamap MF_00270 30S ribosomal protein S18 [rpsR]. 2 73 21.313 T 15-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM378_17920 67fe427cd89686e65b66cbca92536eb0 157 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 81 155 8.0E-23 T 15-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 AM378_17920 67fe427cd89686e65b66cbca92536eb0 157 PIRSF PIRSF006092 1 157 1.3E-46 T 15-10-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 AM378_17920 67fe427cd89686e65b66cbca92536eb0 157 Gene3D G3DSA:3.10.50.30 77 157 1.9E-33 T 15-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 AM378_17920 67fe427cd89686e65b66cbca92536eb0 157 Hamap MF_00930 Transcription elongation factor GreB [greB]. 1 156 54.171 T 15-10-2018 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 AM378_17920 67fe427cd89686e65b66cbca92536eb0 157 Pfam PF03449 Transcription elongation factor, N-terminal 5 74 5.9E-27 T 15-10-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 AM378_17920 67fe427cd89686e65b66cbca92536eb0 157 TIGRFAM TIGR01461 greB: transcription elongation factor GreB 3 157 1.0E-83 T 15-10-2018 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 AM378_17920 67fe427cd89686e65b66cbca92536eb0 157 SUPERFAMILY SSF46557 4 78 4.19E-28 T 15-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 AM378_17920 67fe427cd89686e65b66cbca92536eb0 157 Gene3D G3DSA:1.10.287.180 1 76 4.2E-33 T 15-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 AM378_17920 67fe427cd89686e65b66cbca92536eb0 157 Hamap MF_00105 Transcription elongation factor GreA [greA]. 2 154 28.463 T 15-10-2018 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 AM378_17920 67fe427cd89686e65b66cbca92536eb0 157 SUPERFAMILY SSF54534 80 155 6.54E-20 T 15-10-2018 AM378_17920 67fe427cd89686e65b66cbca92536eb0 157 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 17 48 - T 15-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 AM378_09090 a5db8b9799f882c95d9e088340d92c36 205 SUPERFAMILY SSF48317 37 198 1.99E-8 T 15-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily AM378_09090 a5db8b9799f882c95d9e088340d92c36 205 Gene3D G3DSA:1.20.144.10 109 203 1.8E-7 T 15-10-2018 AM378_09090 a5db8b9799f882c95d9e088340d92c36 205 Pfam PF14378 PAP2 superfamily 48 186 3.7E-10 T 15-10-2018 IPR026841 Inositolphosphotransferase Aur1/Ipt1 AM378_18885 b09bc27c7c3b2864277a62e266321a6b 309 Pfam PF01370 NAD dependent epimerase/dehydratase family 2 235 6.6E-47 T 15-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 AM378_18885 b09bc27c7c3b2864277a62e266321a6b 309 Gene3D G3DSA:3.90.25.10 167 289 2.3E-120 T 15-10-2018 AM378_18885 b09bc27c7c3b2864277a62e266321a6b 309 TIGRFAM TIGR02197 heptose_epim: ADP-glyceromanno-heptose 6-epimerase 2 307 5.8E-136 T 15-10-2018 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase GO:0005975|GO:0008712|GO:0050661 KEGG: 00540+5.1.3.20 AM378_18885 b09bc27c7c3b2864277a62e266321a6b 309 SUPERFAMILY SSF51735 1 305 1.42E-63 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily AM378_18885 b09bc27c7c3b2864277a62e266321a6b 309 Hamap MF_01601 ADP-L-glycero-D-manno-heptose-6-epimerase [hldD]. 1 308 48.504 T 15-10-2018 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase GO:0005975|GO:0008712|GO:0050661 KEGG: 00540+5.1.3.20 AM378_18885 b09bc27c7c3b2864277a62e266321a6b 309 Gene3D G3DSA:3.40.50.720 3 301 2.3E-120 T 15-10-2018 AM378_22275 c8634315c7dde5fd1bd594ceef2bb0ff 346 Pfam PF08468 Methyltransferase small domain N-terminal 8 162 4.3E-53 T 15-10-2018 IPR013675 Methyltransferase small, N-terminal GO:0006364|GO:0008990 AM378_22275 c8634315c7dde5fd1bd594ceef2bb0ff 346 Gene3D G3DSA:3.40.50.150 1 158 1.3E-52 T 15-10-2018 AM378_22275 c8634315c7dde5fd1bd594ceef2bb0ff 346 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 265 271 - T 15-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 AM378_22275 c8634315c7dde5fd1bd594ceef2bb0ff 346 Gene3D G3DSA:3.40.50.150 159 338 1.4E-48 T 15-10-2018 AM378_22275 c8634315c7dde5fd1bd594ceef2bb0ff 346 Hamap MF_01862 Ribosomal RNA small subunit methyltransferase C [rsmC]. 4 336 45.493 T 15-10-2018 IPR023543 rRNA small subunit methyltransferase C GO:0008649 AM378_22275 c8634315c7dde5fd1bd594ceef2bb0ff 346 SUPERFAMILY SSF53335 152 315 1.82E-29 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM378_22275 c8634315c7dde5fd1bd594ceef2bb0ff 346 Pfam PF05175 Methyltransferase small domain 167 333 7.9E-60 T 15-10-2018 IPR007848 Methyltransferase small domain GO:0008168 AM378_23245 63253a2550875150bf1b42058daac87c 875 Gene3D G3DSA:3.10.310.40 764 872 8.8E-35 T 15-10-2018 AM378_23245 63253a2550875150bf1b42058daac87c 875 Gene3D G3DSA:2.40.30.130 460 552 5.2E-12 T 15-10-2018 AM378_23245 63253a2550875150bf1b42058daac87c 875 PRINTS PR00980 Alanyl-tRNA synthetase signature 306 319 3.2E-33 T 15-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 AM378_23245 63253a2550875150bf1b42058daac87c 875 PRINTS PR00980 Alanyl-tRNA synthetase signature 236 249 3.2E-33 T 15-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 AM378_23245 63253a2550875150bf1b42058daac87c 875 PRINTS PR00980 Alanyl-tRNA synthetase signature 76 87 3.2E-33 T 15-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 AM378_23245 63253a2550875150bf1b42058daac87c 875 PRINTS PR00980 Alanyl-tRNA synthetase signature 282 298 3.2E-33 T 15-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 AM378_23245 63253a2550875150bf1b42058daac87c 875 PRINTS PR00980 Alanyl-tRNA synthetase signature 209 220 3.2E-33 T 15-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 AM378_23245 63253a2550875150bf1b42058daac87c 875 Gene3D G3DSA:3.30.980.10 563 697 3.5E-52 T 15-10-2018 AM378_23245 63253a2550875150bf1b42058daac87c 875 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 653 696 7.5E-18 T 15-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 AM378_23245 63253a2550875150bf1b42058daac87c 875 SUPERFAMILY SSF55186 552 711 3.53E-53 T 15-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 AM378_23245 63253a2550875150bf1b42058daac87c 875 TIGRFAM TIGR00344 alaS: alanine--tRNA ligase 7 854 0.0 T 15-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 AM378_23245 63253a2550875150bf1b42058daac87c 875 Hamap MF_00036_B Alanine--tRNA ligase [alaS]. 1 875 209.339 T 15-10-2018 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria GO:0004813 KEGG: 00970+6.1.1.7 AM378_23245 63253a2550875150bf1b42058daac87c 875 SMART SM00863 653 696 9.8E-22 T 15-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 AM378_23245 63253a2550875150bf1b42058daac87c 875 Pfam PF01411 tRNA synthetases class II (A) 7 556 5.7E-236 T 15-10-2018 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 AM378_23245 63253a2550875150bf1b42058daac87c 875 SUPERFAMILY SSF50447 455 552 1.09E-18 T 15-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily AM378_23245 63253a2550875150bf1b42058daac87c 875 Gene3D G3DSA:3.30.54.20 624 677 3.5E-52 T 15-10-2018 AM378_23245 63253a2550875150bf1b42058daac87c 875 Pfam PF02272 DHHA1 domain 732 871 6.0E-31 T 15-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 AM378_23245 63253a2550875150bf1b42058daac87c 875 Gene3D G3DSA:3.30.930.10 2 252 1.7E-124 T 15-10-2018 AM378_23245 63253a2550875150bf1b42058daac87c 875 SUPERFAMILY SSF101353 256 462 5.89E-60 T 15-10-2018 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily GO:0000166|GO:0004813|GO:0005524|GO:0005737|GO:0006419 KEGG: 00970+6.1.1.7 AM378_23245 63253a2550875150bf1b42058daac87c 875 SUPERFAMILY SSF55681 4 255 1.59E-108 T 15-10-2018 AM378_20370 c726cfd3387f5acf2e9525ab7f76c460 295 SUPERFAMILY SSF161098 56 283 1.44E-52 T 15-10-2018 IPR035906 MetI-like superfamily AM378_20370 c726cfd3387f5acf2e9525ab7f76c460 295 Gene3D G3DSA:1.10.3720.10 52 293 2.6E-60 T 15-10-2018 IPR035906 MetI-like superfamily AM378_20370 c726cfd3387f5acf2e9525ab7f76c460 295 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 89 293 1.7E-19 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AM378_02530 6ccf92c488720384851cbe5671d4004e 530 SUPERFAMILY SSF52540 298 523 1.89E-45 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_02530 6ccf92c488720384851cbe5671d4004e 530 SUPERFAMILY SSF52540 2 242 1.18E-45 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_02530 6ccf92c488720384851cbe5671d4004e 530 Gene3D G3DSA:3.40.50.300 2 280 3.7E-57 T 15-10-2018 AM378_02530 6ccf92c488720384851cbe5671d4004e 530 Pfam PF12848 ABC transporter 224 309 7.2E-21 T 15-10-2018 IPR032781 ABC-transporter extension domain AM378_02530 6ccf92c488720384851cbe5671d4004e 530 Gene3D G3DSA:3.40.50.300 282 528 8.1E-56 T 15-10-2018 AM378_02530 6ccf92c488720384851cbe5671d4004e 530 Pfam PF00005 ABC transporter 337 467 6.7E-23 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM378_02530 6ccf92c488720384851cbe5671d4004e 530 SMART SM00382 26 228 1.1E-9 T 15-10-2018 IPR003593 AAA+ ATPase domain AM378_02530 6ccf92c488720384851cbe5671d4004e 530 SMART SM00382 344 521 4.5E-10 T 15-10-2018 IPR003593 AAA+ ATPase domain AM378_02530 6ccf92c488720384851cbe5671d4004e 530 Pfam PF00005 ABC transporter 18 184 3.6E-19 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM378_22750 8dab145a7160ff4940f63790ce0bcb94 363 Hamap MF_01033 3-isopropylmalate dehydrogenase [leuB]. 5 359 51.579 T 15-10-2018 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 AM378_22750 8dab145a7160ff4940f63790ce0bcb94 363 Gene3D G3DSA:3.40.718.10 1 363 5.1E-158 T 15-10-2018 AM378_22750 8dab145a7160ff4940f63790ce0bcb94 363 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 247 266 - T 15-10-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 AM378_22750 8dab145a7160ff4940f63790ce0bcb94 363 SUPERFAMILY SSF53659 2 360 1.29E-123 T 15-10-2018 AM378_22750 8dab145a7160ff4940f63790ce0bcb94 363 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 6 355 4.3E-137 T 15-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 AM378_22750 8dab145a7160ff4940f63790ce0bcb94 363 SMART SM01329 6 355 4.5E-204 T 15-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 AM378_22750 8dab145a7160ff4940f63790ce0bcb94 363 TIGRFAM TIGR00169 leuB: 3-isopropylmalate dehydrogenase 6 354 1.9E-168 T 15-10-2018 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 AM378_10095 050e53af42cfe85b14c5f883d9ad0280 428 Pfam PF11799 impB/mucB/samB family C-terminal domain 243 351 7.4E-14 T 15-10-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 AM378_10095 050e53af42cfe85b14c5f883d9ad0280 428 Pfam PF13438 Domain of unknown function (DUF4113) 370 419 2.0E-21 T 15-10-2018 IPR025188 Domain of unknown function DUF4113 AM378_10095 050e53af42cfe85b14c5f883d9ad0280 428 Gene3D G3DSA:1.10.150.20 178 230 1.1E-8 T 15-10-2018 AM378_10095 050e53af42cfe85b14c5f883d9ad0280 428 Gene3D G3DSA:2.30.40.20 10 73 7.3E-43 T 15-10-2018 AM378_10095 050e53af42cfe85b14c5f883d9ad0280 428 Gene3D G3DSA:3.30.70.270 4 154 7.3E-43 T 15-10-2018 AM378_10095 050e53af42cfe85b14c5f883d9ad0280 428 SUPERFAMILY SSF56672 1 236 1.69E-68 T 15-10-2018 AM378_10095 050e53af42cfe85b14c5f883d9ad0280 428 SUPERFAMILY SSF100879 249 334 3.92E-5 T 15-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 AM378_10095 050e53af42cfe85b14c5f883d9ad0280 428 Gene3D G3DSA:3.30.1490.100 246 354 5.0E-5 T 15-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 AM378_10095 050e53af42cfe85b14c5f883d9ad0280 428 Pfam PF00817 impB/mucB/samB family 5 149 1.6E-35 T 15-10-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 AM378_08245 8b9a29fcb97718598147a323dc01ab72 486 Pfam PF13091 PLD-like domain 134 242 2.7E-11 T 15-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 AM378_08245 8b9a29fcb97718598147a323dc01ab72 486 Pfam PF13091 PLD-like domain 329 442 2.6E-23 T 15-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 AM378_08245 8b9a29fcb97718598147a323dc01ab72 486 Gene3D G3DSA:3.30.870.10 112 302 7.1E-36 T 15-10-2018 AM378_08245 8b9a29fcb97718598147a323dc01ab72 486 Gene3D G3DSA:3.30.870.10 303 484 4.9E-31 T 15-10-2018 AM378_08245 8b9a29fcb97718598147a323dc01ab72 486 SUPERFAMILY SSF56024 72 315 8.63E-48 T 15-10-2018 AM378_08245 8b9a29fcb97718598147a323dc01ab72 486 Hamap MF_00190 Cardiolipin synthase A [clsA]. 2 486 52.301 T 15-10-2018 IPR030840 Cardiolipin synthase A GO:0008808|GO:0016780|GO:0032049 AM378_08245 8b9a29fcb97718598147a323dc01ab72 486 SMART SM00155 219 246 5.1E-4 T 15-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 AM378_08245 8b9a29fcb97718598147a323dc01ab72 486 SMART SM00155 399 426 4.2E-5 T 15-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 AM378_08245 8b9a29fcb97718598147a323dc01ab72 486 Pfam PF13396 Phospholipase_D-nuclease N-terminal 23 59 3.3E-7 T 15-10-2018 IPR027379 Cardiolipin synthase N-terminal AM378_08245 8b9a29fcb97718598147a323dc01ab72 486 SUPERFAMILY SSF56024 273 473 1.66E-48 T 15-10-2018 AM378_08245 8b9a29fcb97718598147a323dc01ab72 486 TIGRFAM TIGR04265 bac_cardiolipin: cardiolipin synthase 6 486 2.8E-208 T 15-10-2018 IPR022924 Cardiolipin synthase GO:0008808|GO:0016780|GO:0032049 AM378_24230 be5d6b30fdf39fdd2e653faec168d6b8 149 Hamap MF_00440 Transcriptional repressor NrdR [nrdR]. 1 149 88.297 T 15-10-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 AM378_24230 be5d6b30fdf39fdd2e653faec168d6b8 149 Pfam PF03477 ATP cone domain 50 136 8.4E-16 T 15-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 AM378_24230 be5d6b30fdf39fdd2e653faec168d6b8 149 TIGRFAM TIGR00244 TIGR00244: transcriptional regulator NrdR 1 147 8.0E-76 T 15-10-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 AM378_05615 9f095c9942cac588657da8370c739969 261 SMART SM00382 31 220 6.3E-14 T 15-10-2018 IPR003593 AAA+ ATPase domain AM378_05615 9f095c9942cac588657da8370c739969 261 SUPERFAMILY SSF52540 7 233 3.04E-55 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_05615 9f095c9942cac588657da8370c739969 261 Pfam PF00005 ABC transporter 23 171 1.0E-24 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM378_05615 9f095c9942cac588657da8370c739969 261 Gene3D G3DSA:3.40.50.300 1 261 1.3E-75 T 15-10-2018 AM378_05615 9f095c9942cac588657da8370c739969 261 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM378_21195 4f783d8b744cee8d22e14cf0a00d678a 1272 Pfam PF04357 TamB, inner membrane protein subunit of TAM complex 936 1272 2.8E-68 T 15-10-2018 IPR007452 Translocation and assembly module TamB AM378_12350 84147dcfa7414f7d0e2d84d7346fce7a 244 Gene3D G3DSA:2.40.50.40 136 204 1.1E-16 T 15-10-2018 AM378_12350 84147dcfa7414f7d0e2d84d7346fce7a 244 SMART SM00448 1 112 5.8E-22 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM378_12350 84147dcfa7414f7d0e2d84d7346fce7a 244 SUPERFAMILY SSF52172 2 124 2.13E-25 T 15-10-2018 IPR011006 CheY-like superfamily AM378_12350 84147dcfa7414f7d0e2d84d7346fce7a 244 Pfam PF04397 LytTr DNA-binding domain 146 242 4.4E-30 T 15-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 AM378_12350 84147dcfa7414f7d0e2d84d7346fce7a 244 SMART SM00850 145 243 2.3E-35 T 15-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 AM378_12350 84147dcfa7414f7d0e2d84d7346fce7a 244 Pfam PF00072 Response regulator receiver domain 4 112 2.2E-23 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM378_12350 84147dcfa7414f7d0e2d84d7346fce7a 244 Gene3D G3DSA:3.40.50.2300 1 123 1.0E-29 T 15-10-2018 AM378_22575 e7cfc322261e27063ca9c47c2df31aaf 287 Pfam PF02668 Taurine catabolism dioxygenase TauD, TfdA family 16 267 2.8E-44 T 15-10-2018 IPR003819 TauD/TfdA-like domain GO:0016491|GO:0055114 Reactome: R-HSA-71262 AM378_22575 e7cfc322261e27063ca9c47c2df31aaf 287 SUPERFAMILY SSF51197 13 269 3.94E-60 T 15-10-2018 AM378_22575 e7cfc322261e27063ca9c47c2df31aaf 287 Gene3D G3DSA:3.60.130.10 1 282 1.8E-96 T 15-10-2018 AM378_19060 ec3df242c14d763e7e7defb9659863d4 466 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 30 458 1.0E-138 T 15-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 AM378_19060 ec3df242c14d763e7e7defb9659863d4 466 Pfam PF00860 Permease family 35 427 1.0E-107 T 15-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 AM378_19060 ec3df242c14d763e7e7defb9659863d4 466 TIGRFAM TIGR03173 pbuX: xanthine permease 42 460 4.6E-125 T 15-10-2018 IPR017588 Uric acid permease UacT-like GO:0016021|GO:0022857|GO:0055085 AM378_19060 ec3df242c14d763e7e7defb9659863d4 466 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 376 396 - T 15-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 AM378_16930 e9ff87b2f6cbc07850e519f60813e1f6 98 SUPERFAMILY SSF46689 4 98 3.88E-27 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AM378_16930 e9ff87b2f6cbc07850e519f60813e1f6 98 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 78 98 8.3E-13 T 15-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AM378_16930 e9ff87b2f6cbc07850e519f60813e1f6 98 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 61 78 8.3E-13 T 15-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AM378_16930 e9ff87b2f6cbc07850e519f60813e1f6 98 Hamap MF_00166 DNA-binding protein Fis [fis]. 1 98 33.769 T 15-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 AM378_16930 e9ff87b2f6cbc07850e519f60813e1f6 98 Gene3D G3DSA:1.10.10.60 1 98 1.1E-35 T 15-10-2018 AM378_16930 e9ff87b2f6cbc07850e519f60813e1f6 98 PRINTS PR01591 DNA-binding protein FIS signature 57 69 7.6E-35 T 15-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 AM378_16930 e9ff87b2f6cbc07850e519f60813e1f6 98 PRINTS PR01591 DNA-binding protein FIS signature 42 57 7.6E-35 T 15-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 AM378_16930 e9ff87b2f6cbc07850e519f60813e1f6 98 PRINTS PR01591 DNA-binding protein FIS signature 26 42 7.6E-35 T 15-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 AM378_16930 e9ff87b2f6cbc07850e519f60813e1f6 98 PRINTS PR01591 DNA-binding protein FIS signature 9 26 7.6E-35 T 15-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 AM378_16930 e9ff87b2f6cbc07850e519f60813e1f6 98 Pfam PF02954 Bacterial regulatory protein, Fis family 55 95 3.8E-14 T 15-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AM378_16930 e9ff87b2f6cbc07850e519f60813e1f6 98 PIRSF PIRSF002097 1 98 4.9E-46 T 15-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 AM378_20165 396ae2b3f6da67491b0a3ca573c0bd13 295 Pfam PF00892 EamA-like transporter family 9 142 1.0E-16 T 15-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AM378_20165 396ae2b3f6da67491b0a3ca573c0bd13 295 SUPERFAMILY SSF103481 47 145 1.7E-13 T 15-10-2018 AM378_20165 396ae2b3f6da67491b0a3ca573c0bd13 295 TIGRFAM TIGR00688 rarD: protein RarD 8 261 2.8E-102 T 15-10-2018 IPR004626 RarD protein GO:0005887 AM378_20165 396ae2b3f6da67491b0a3ca573c0bd13 295 SUPERFAMILY SSF103481 191 285 4.05E-8 T 15-10-2018 AM378_12735 017276a5f8d73411d788cce6bca94b3d 313 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 65 1.5E-13 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_12735 017276a5f8d73411d788cce6bca94b3d 313 SUPERFAMILY SSF53850 94 290 1.99E-22 T 15-10-2018 AM378_12735 017276a5f8d73411d788cce6bca94b3d 313 Pfam PF03466 LysR substrate binding domain 94 288 7.5E-20 T 15-10-2018 IPR005119 LysR, substrate-binding AM378_12735 017276a5f8d73411d788cce6bca94b3d 313 Gene3D G3DSA:1.10.10.10 4 91 1.4E-17 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_12735 017276a5f8d73411d788cce6bca94b3d 313 Gene3D G3DSA:3.40.190.290 94 274 3.5E-13 T 15-10-2018 AM378_12735 017276a5f8d73411d788cce6bca94b3d 313 SUPERFAMILY SSF46785 5 88 1.41E-15 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM378_19200 0a9c2e63309e548f70d1930a66431317 333 Gene3D G3DSA:3.40.50.2300 70 322 8.4E-87 T 15-10-2018 AM378_19200 0a9c2e63309e548f70d1930a66431317 333 Gene3D G3DSA:1.10.260.40 3 59 1.1E-23 T 15-10-2018 AM378_19200 0a9c2e63309e548f70d1930a66431317 333 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 6.6E-21 T 15-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM378_19200 0a9c2e63309e548f70d1930a66431317 333 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 4.6E-6 T 15-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM378_19200 0a9c2e63309e548f70d1930a66431317 333 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 4.6E-6 T 15-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM378_19200 0a9c2e63309e548f70d1930a66431317 333 SUPERFAMILY SSF53822 60 331 1.4E-90 T 15-10-2018 IPR028082 Periplasmic binding protein-like I AM378_19200 0a9c2e63309e548f70d1930a66431317 333 SMART SM00354 1 71 5.1E-34 T 15-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM378_19200 0a9c2e63309e548f70d1930a66431317 333 Pfam PF13377 Periplasmic binding protein-like domain 169 330 1.5E-43 T 15-10-2018 AM378_19200 0a9c2e63309e548f70d1930a66431317 333 Gene3D G3DSA:3.40.50.2300 161 323 8.4E-87 T 15-10-2018 AM378_19200 0a9c2e63309e548f70d1930a66431317 333 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 15-10-2018 AM378_19200 0a9c2e63309e548f70d1930a66431317 333 SUPERFAMILY SSF47413 2 59 9.01E-18 T 15-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AM378_21565 ee97538838aa2b5c5b679e1e6e384d31 712 SUPERFAMILY SSF51998 121 687 4.27E-194 T 15-10-2018 AM378_21565 ee97538838aa2b5c5b679e1e6e384d31 712 Gene3D G3DSA:3.20.70.20 121 687 2.0E-232 T 15-10-2018 AM378_21565 ee97538838aa2b5c5b679e1e6e384d31 712 TIGRFAM TIGR02487 NrdD: anaerobic ribonucleoside-triphosphate reductase 115 705 3.3E-203 T 15-10-2018 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.1.98.6|KEGG: 00240+1.1.98.6|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 AM378_21565 ee97538838aa2b5c5b679e1e6e384d31 712 Pfam PF03477 ATP cone domain 4 89 3.2E-20 T 15-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 AM378_21565 ee97538838aa2b5c5b679e1e6e384d31 712 Pfam PF13597 Anaerobic ribonucleoside-triphosphate reductase 116 705 2.4E-180 T 15-10-2018 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.1.98.6|KEGG: 00240+1.1.98.6|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 AM378_21565 ee97538838aa2b5c5b679e1e6e384d31 712 ProSitePatterns PS00850 Glycine radical domain signature. 676 684 - T 15-10-2018 IPR019777 Formate C-acetyltransferase glycine radical, conserved site AM378_15880 a6c0d550c7c9d41518a55229446ff952 244 SMART SM00345 24 83 7.3E-16 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM378_15880 a6c0d550c7c9d41518a55229446ff952 244 Gene3D G3DSA:1.10.10.10 14 84 7.4E-18 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_15880 a6c0d550c7c9d41518a55229446ff952 244 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 57 73 5.1E-8 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM378_15880 a6c0d550c7c9d41518a55229446ff952 244 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 43 57 5.1E-8 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM378_15880 a6c0d550c7c9d41518a55229446ff952 244 SMART SM00866 103 239 4.4E-33 T 15-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 AM378_15880 a6c0d550c7c9d41518a55229446ff952 244 Gene3D G3DSA:3.40.1410.10 93 243 9.7E-39 T 15-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily AM378_15880 a6c0d550c7c9d41518a55229446ff952 244 Pfam PF07702 UTRA domain 105 238 6.6E-32 T 15-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 AM378_15880 a6c0d550c7c9d41518a55229446ff952 244 Pfam PF00392 Bacterial regulatory proteins, gntR family 22 83 5.6E-14 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM378_15880 a6c0d550c7c9d41518a55229446ff952 244 SUPERFAMILY SSF64288 71 242 1.27E-40 T 15-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily AM378_15880 a6c0d550c7c9d41518a55229446ff952 244 SUPERFAMILY SSF46785 19 84 9.36E-17 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM378_02465 5dce0f2a163f7a38d9f1db03f40d7fdb 526 Hamap MF_00212 Probable malate:quinone oxidoreductase [mqo]. 25 516 54.284 T 15-10-2018 IPR006231 Malate:quinone-oxidoreductase GO:0006099|GO:0008924 KEGG: 00020+1.1.5.4|KEGG: 00620+1.1.5.4|MetaCyc: PWY-7254 AM378_02465 5dce0f2a163f7a38d9f1db03f40d7fdb 526 Pfam PF06039 Malate:quinone oxidoreductase (Mqo) 28 516 2.8E-242 T 15-10-2018 IPR006231 Malate:quinone-oxidoreductase GO:0006099|GO:0008924 KEGG: 00020+1.1.5.4|KEGG: 00620+1.1.5.4|MetaCyc: PWY-7254 AM378_02465 5dce0f2a163f7a38d9f1db03f40d7fdb 526 SUPERFAMILY SSF51905 11 355 2.37E-24 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AM378_02465 5dce0f2a163f7a38d9f1db03f40d7fdb 526 TIGRFAM TIGR01320 mal_quin_oxido: malate dehydrogenase (acceptor) 29 514 4.0E-214 T 15-10-2018 IPR006231 Malate:quinone-oxidoreductase GO:0006099|GO:0008924 KEGG: 00020+1.1.5.4|KEGG: 00620+1.1.5.4|MetaCyc: PWY-7254 AM378_07165 85ff1f100c3095f045e14cb45f4d3b23 298 Pfam PF00892 EamA-like transporter family 9 139 2.5E-11 T 15-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AM378_07165 85ff1f100c3095f045e14cb45f4d3b23 298 Pfam PF00892 EamA-like transporter family 152 282 5.7E-15 T 15-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AM378_07165 85ff1f100c3095f045e14cb45f4d3b23 298 SUPERFAMILY SSF103481 38 141 4.45E-15 T 15-10-2018 AM378_07165 85ff1f100c3095f045e14cb45f4d3b23 298 SUPERFAMILY SSF103481 186 286 9.02E-13 T 15-10-2018 AM378_05440 17eb3ceb175b0fbbd0b27287f2e0ea41 286 Pfam PF00950 ABC 3 transport family 10 265 6.0E-89 T 15-10-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 AM378_05440 17eb3ceb175b0fbbd0b27287f2e0ea41 286 SUPERFAMILY SSF81345 3 261 2.35E-38 T 15-10-2018 IPR037294 ABC transporter, BtuC-like AM378_05440 17eb3ceb175b0fbbd0b27287f2e0ea41 286 Gene3D G3DSA:1.10.3470.10 39 269 5.8E-8 T 15-10-2018 IPR037294 ABC transporter, BtuC-like AM378_22790 1689ac2ef62cd4d421a3db46b8df086a 146 Pfam PF06610 L-alanine exporter 5 142 3.9E-69 T 15-10-2018 IPR010574 L-alanine exporter AlaE GO:0016021|GO:0034639 AM378_22790 1689ac2ef62cd4d421a3db46b8df086a 146 ProDom PD090021 MEMBRANE YGAW TRANSMEMBRANE INNER VV2263 Y3636 VC1828 VP1070 9 142 7.0E-51 T 15-10-2018 IPR010574 L-alanine exporter AlaE GO:0016021|GO:0034639 AM378_22790 1689ac2ef62cd4d421a3db46b8df086a 146 Hamap MF_00914 L-alanine exporter AlaE [alaE]. 1 145 33.752 T 15-10-2018 IPR010574 L-alanine exporter AlaE GO:0016021|GO:0034639 AM378_05415 1b140eaa329f9bd77ed314feee81c06f 221 Gene3D G3DSA:3.40.50.1000 10 202 5.8E-58 T 15-10-2018 IPR023214 HAD superfamily AM378_05415 1b140eaa329f9bd77ed314feee81c06f 221 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 104 117 6.7E-9 T 15-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AM378_05415 1b140eaa329f9bd77ed314feee81c06f 221 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 135 151 6.7E-9 T 15-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AM378_05415 1b140eaa329f9bd77ed314feee81c06f 221 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 7 18 6.7E-9 T 15-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AM378_05415 1b140eaa329f9bd77ed314feee81c06f 221 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 153 173 6.7E-9 T 15-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AM378_05415 1b140eaa329f9bd77ed314feee81c06f 221 Pfam PF13419 Haloacid dehalogenase-like hydrolase 11 190 6.3E-26 T 15-10-2018 AM378_05415 1b140eaa329f9bd77ed314feee81c06f 221 Gene3D G3DSA:1.10.150.240 20 91 5.8E-58 T 15-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 AM378_05415 1b140eaa329f9bd77ed314feee81c06f 221 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 86 191 1.1E-12 T 15-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AM378_05415 1b140eaa329f9bd77ed314feee81c06f 221 SUPERFAMILY SSF56784 7 216 7.31E-50 T 15-10-2018 IPR036412 HAD-like superfamily AM378_19100 94e76114d2df532c5582a29951430a5d 349 SUPERFAMILY SSF47384 121 190 1.12E-12 T 15-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AM378_19100 94e76114d2df532c5582a29951430a5d 349 SMART SM00091 7 75 1.6E-5 T 15-10-2018 IPR000014 PAS domain AM378_19100 94e76114d2df532c5582a29951430a5d 349 Gene3D G3DSA:1.10.287.130 116 191 2.7E-14 T 15-10-2018 AM378_19100 94e76114d2df532c5582a29951430a5d 349 Pfam PF00512 His Kinase A (phospho-acceptor) domain 131 190 1.8E-14 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM378_19100 94e76114d2df532c5582a29951430a5d 349 SMART SM00388 129 194 6.2E-15 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM378_19100 94e76114d2df532c5582a29951430a5d 349 Pfam PF00989 PAS fold 11 97 1.4E-6 T 15-10-2018 IPR013767 PAS fold GO:0006355 AM378_19100 94e76114d2df532c5582a29951430a5d 349 SMART SM00387 233 349 3.1E-31 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AM378_19100 94e76114d2df532c5582a29951430a5d 349 Gene3D G3DSA:3.30.450.20 9 112 2.0E-16 T 15-10-2018 AM378_19100 94e76114d2df532c5582a29951430a5d 349 SUPERFAMILY SSF55874 198 346 1.83E-35 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AM378_19100 94e76114d2df532c5582a29951430a5d 349 Gene3D G3DSA:3.30.565.10 192 348 5.1E-43 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AM378_19100 94e76114d2df532c5582a29951430a5d 349 SUPERFAMILY SSF55785 11 99 4.35E-5 T 15-10-2018 IPR035965 PAS domain superfamily AM378_19100 94e76114d2df532c5582a29951430a5d 349 PRINTS PR00344 Bacterial sensor protein C-terminal signature 281 295 6.7E-11 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM378_19100 94e76114d2df532c5582a29951430a5d 349 PRINTS PR00344 Bacterial sensor protein C-terminal signature 333 346 6.7E-11 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM378_19100 94e76114d2df532c5582a29951430a5d 349 PRINTS PR00344 Bacterial sensor protein C-terminal signature 310 328 6.7E-11 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM378_19100 94e76114d2df532c5582a29951430a5d 349 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 234 347 9.8E-15 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AM378_21550 e25cf8ec6fdab6dba818ce48c01b9afb 241 Pfam PF00117 Glutamine amidotransferase class-I 25 186 1.0E-15 T 15-10-2018 IPR017926 Glutamine amidotransferase AM378_21550 e25cf8ec6fdab6dba818ce48c01b9afb 241 Gene3D G3DSA:3.40.50.880 1 236 9.1E-59 T 15-10-2018 IPR029062 Class I glutamine amidotransferase-like AM378_21550 e25cf8ec6fdab6dba818ce48c01b9afb 241 SUPERFAMILY SSF52317 1 229 2.43E-35 T 15-10-2018 IPR029062 Class I glutamine amidotransferase-like AM378_21340 acd4e913d9585057fa436ba413e3abd6 152 Gene3D G3DSA:3.30.300.70 2 81 5.0E-25 T 15-10-2018 IPR035956 RimP, N-terminal domain superfamily AM378_21340 acd4e913d9585057fa436ba413e3abd6 152 Pfam PF02576 RimP N-terminal domain 14 84 4.4E-29 T 15-10-2018 IPR028989 Ribosome maturation factor RimP, N-terminal AM378_21340 acd4e913d9585057fa436ba413e3abd6 152 Pfam PF17384 RimP C-terminal SH3 domain 87 152 2.4E-22 T 15-10-2018 IPR028998 Ribosome maturation factor RimP, C-terminal AM378_21340 acd4e913d9585057fa436ba413e3abd6 152 SUPERFAMILY SSF74942 85 152 1.57E-16 T 15-10-2018 IPR036847 Ribosome maturation factor RimP, C-terminal domain superfamily AM378_21340 acd4e913d9585057fa436ba413e3abd6 152 Hamap MF_01077 Ribosome maturation factor RimP [rimP]. 8 152 24.458 T 15-10-2018 IPR003728 Ribosome maturation factor RimP GO:0042274 AM378_21340 acd4e913d9585057fa436ba413e3abd6 152 SUPERFAMILY SSF75420 4 84 1.09E-24 T 15-10-2018 IPR035956 RimP, N-terminal domain superfamily AM378_09495 3875f5f21428a80612bd385b929a1c7d 378 Gene3D G3DSA:1.20.1420.20 131 378 1.0E-100 T 15-10-2018 IPR038352 Imelysin-like domain superfamily AM378_09495 3875f5f21428a80612bd385b929a1c7d 378 Pfam PF09375 Imelysin 139 371 4.2E-41 T 15-10-2018 IPR018976 Imelysin-like domain AM378_09495 3875f5f21428a80612bd385b929a1c7d 378 Gene3D G3DSA:2.60.40.420 22 119 2.5E-7 T 15-10-2018 IPR008972 Cupredoxin AM378_09495 3875f5f21428a80612bd385b929a1c7d 378 SUPERFAMILY SSF49503 18 118 1.75E-7 T 15-10-2018 IPR008972 Cupredoxin AM378_09495 3875f5f21428a80612bd385b929a1c7d 378 Pfam PF13473 Cupredoxin-like domain 15 118 1.2E-24 T 15-10-2018 IPR028096 EfeO-type cupredoxin-like domain AM378_15110 a5ad8c9239689e9f636d6901d2032af3 283 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 147 169 8.4E-10 T 15-10-2018 IPR005511 Senescence marker protein-30 (SMP-30) AM378_15110 a5ad8c9239689e9f636d6901d2032af3 283 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 17 34 8.4E-10 T 15-10-2018 IPR005511 Senescence marker protein-30 (SMP-30) AM378_15110 a5ad8c9239689e9f636d6901d2032af3 283 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 253 271 8.4E-10 T 15-10-2018 IPR005511 Senescence marker protein-30 (SMP-30) AM378_15110 a5ad8c9239689e9f636d6901d2032af3 283 Pfam PF08450 SMP-30/Gluconolaconase/LRE-like region 16 271 2.6E-52 T 15-10-2018 IPR013658 SMP-30/Gluconolactonase/LRE-like region AM378_15110 a5ad8c9239689e9f636d6901d2032af3 283 SUPERFAMILY SSF63829 4 283 3.71E-61 T 15-10-2018 AM378_15110 a5ad8c9239689e9f636d6901d2032af3 283 Gene3D G3DSA:2.120.10.30 1 280 2.7E-102 T 15-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like AM378_19990 af5e758c88b34ac31b21e3eea8d8d6b7 419 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 160 363 2.3E-22 T 15-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 AM378_19990 af5e758c88b34ac31b21e3eea8d8d6b7 419 SMART SM00959 5 47 3.1E-17 T 15-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 AM378_19990 af5e758c88b34ac31b21e3eea8d8d6b7 419 Pfam PF07497 Rho termination factor, RNA-binding domain 52 125 4.7E-32 T 15-10-2018 IPR011113 Rho termination factor, RNA-binding domain GO:0003723|GO:0006353 AM378_19990 af5e758c88b34ac31b21e3eea8d8d6b7 419 TIGRFAM TIGR00767 rho: transcription termination factor Rho 2 417 6.6E-222 T 15-10-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 AM378_19990 af5e758c88b34ac31b21e3eea8d8d6b7 419 SUPERFAMILY SSF52540 90 371 6.75E-68 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_19990 af5e758c88b34ac31b21e3eea8d8d6b7 419 SUPERFAMILY SSF68912 1 46 3.92E-12 T 15-10-2018 IPR036269 Rho termination factor, N-terminal domain superfamily AM378_19990 af5e758c88b34ac31b21e3eea8d8d6b7 419 Gene3D G3DSA:3.40.50.300 130 417 3.9E-134 T 15-10-2018 AM378_19990 af5e758c88b34ac31b21e3eea8d8d6b7 419 SUPERFAMILY SSF50249 48 125 1.88E-29 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold AM378_19990 af5e758c88b34ac31b21e3eea8d8d6b7 419 Gene3D G3DSA:2.40.50.140 48 117 2.8E-35 T 15-10-2018 AM378_19990 af5e758c88b34ac31b21e3eea8d8d6b7 419 Hamap MF_01884 Transcription termination factor Rho [rho]. 1 419 250.745 T 15-10-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 AM378_19990 af5e758c88b34ac31b21e3eea8d8d6b7 419 Pfam PF07498 Rho termination factor, N-terminal domain 5 47 2.0E-16 T 15-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 AM378_19990 af5e758c88b34ac31b21e3eea8d8d6b7 419 SMART SM00382 170 355 1.0E-8 T 15-10-2018 IPR003593 AAA+ ATPase domain AM378_19990 af5e758c88b34ac31b21e3eea8d8d6b7 419 SMART SM00357 52 118 3.3E-18 T 15-10-2018 IPR011129 Cold shock domain GO:0003676 AM378_19990 af5e758c88b34ac31b21e3eea8d8d6b7 419 Gene3D G3DSA:1.10.720.10 1 47 2.7E-24 T 15-10-2018 AM378_09220 04d65d480b6a1f32ac6ef7a8545ea132 524 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 72 438 5.7E-56 T 15-10-2018 IPR000914 Solute-binding protein family 5 domain AM378_09220 04d65d480b6a1f32ac6ef7a8545ea132 524 Gene3D G3DSA:3.40.190.10 205 510 5.4E-79 T 15-10-2018 AM378_09220 04d65d480b6a1f32ac6ef7a8545ea132 524 PIRSF PIRSF002741 10 522 2.5E-44 T 15-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 AM378_09220 04d65d480b6a1f32ac6ef7a8545ea132 524 Gene3D G3DSA:3.10.105.10 283 500 5.4E-79 T 15-10-2018 AM378_09220 04d65d480b6a1f32ac6ef7a8545ea132 524 SUPERFAMILY SSF53850 22 518 5.07E-83 T 15-10-2018 AM378_09220 04d65d480b6a1f32ac6ef7a8545ea132 524 Gene3D G3DSA:3.90.76.10 39 204 5.4E-79 T 15-10-2018 AM378_21050 3493eecb5612a8bbd37e8b7808975f39 416 SMART SM00244 94 254 6.9E-40 T 15-10-2018 IPR001107 Band 7 domain AM378_21050 3493eecb5612a8bbd37e8b7808975f39 416 Gene3D G3DSA:3.30.479.30 123 256 8.4E-18 T 15-10-2018 AM378_21050 3493eecb5612a8bbd37e8b7808975f39 416 Pfam PF12221 Bacterial membrane protein N terminal 1 58 1.1E-14 T 15-10-2018 IPR020980 Menbrane protein HflK, N-terminal AM378_21050 3493eecb5612a8bbd37e8b7808975f39 416 TIGRFAM TIGR01933 hflK: HflK protein 96 355 3.3E-120 T 15-10-2018 IPR010201 HflK GO:0016021 AM378_21050 3493eecb5612a8bbd37e8b7808975f39 416 SUPERFAMILY SSF117892 127 258 4.97E-19 T 15-10-2018 IPR036013 Band 7/SPFH domain superfamily AM378_21050 3493eecb5612a8bbd37e8b7808975f39 416 PRINTS PR00721 Stomatin signature 148 169 3.3E-6 T 15-10-2018 IPR001972 Stomatin family GO:0016020 AM378_21050 3493eecb5612a8bbd37e8b7808975f39 416 PRINTS PR00721 Stomatin signature 101 123 3.3E-6 T 15-10-2018 IPR001972 Stomatin family GO:0016020 AM378_21050 3493eecb5612a8bbd37e8b7808975f39 416 PRINTS PR00721 Stomatin signature 183 200 3.3E-6 T 15-10-2018 IPR001972 Stomatin family GO:0016020 AM378_21050 3493eecb5612a8bbd37e8b7808975f39 416 Pfam PF01145 SPFH domain / Band 7 family 98 270 1.0E-27 T 15-10-2018 IPR001107 Band 7 domain AM378_04255 792e16040f1f91f8f7c20ca79970bb4d 334 SUPERFAMILY SSF51735 115 285 8.88E-27 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily AM378_04255 792e16040f1f91f8f7c20ca79970bb4d 334 Pfam PF13602 Zinc-binding dehydrogenase 201 316 3.4E-7 T 15-10-2018 AM378_04255 792e16040f1f91f8f7c20ca79970bb4d 334 Gene3D G3DSA:3.40.50.720 137 255 1.7E-76 T 15-10-2018 AM378_04255 792e16040f1f91f8f7c20ca79970bb4d 334 SUPERFAMILY SSF50129 10 145 1.49E-25 T 15-10-2018 IPR011032 GroES-like superfamily AM378_04255 792e16040f1f91f8f7c20ca79970bb4d 334 Gene3D G3DSA:3.90.180.10 13 306 1.7E-76 T 15-10-2018 AM378_04255 792e16040f1f91f8f7c20ca79970bb4d 334 SMART SM00829 15 318 5.6E-6 T 15-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AM378_03660 617935699fdf50fe9408914380a42c92 634 Gene3D G3DSA:3.40.50.300 11 279 1.0E-64 T 15-10-2018 AM378_03660 617935699fdf50fe9408914380a42c92 634 Gene3D G3DSA:1.10.287.380 553 634 3.3E-30 T 15-10-2018 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 AM378_03660 617935699fdf50fe9408914380a42c92 634 ProSitePatterns PS00211 ABC transporters family signature. 441 455 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM378_03660 617935699fdf50fe9408914380a42c92 634 Pfam PF00005 ABC transporter 19 185 9.4E-21 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM378_03660 617935699fdf50fe9408914380a42c92 634 Gene3D G3DSA:3.40.50.300 283 552 5.7E-64 T 15-10-2018 AM378_03660 617935699fdf50fe9408914380a42c92 634 SUPERFAMILY SSF52540 311 501 6.74E-46 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_03660 617935699fdf50fe9408914380a42c92 634 Pfam PF12848 ABC transporter 224 299 4.5E-10 T 15-10-2018 IPR032781 ABC-transporter extension domain AM378_03660 617935699fdf50fe9408914380a42c92 634 SMART SM00382 28 230 7.1E-14 T 15-10-2018 IPR003593 AAA+ ATPase domain AM378_03660 617935699fdf50fe9408914380a42c92 634 SMART SM00382 344 514 3.5E-12 T 15-10-2018 IPR003593 AAA+ ATPase domain AM378_03660 617935699fdf50fe9408914380a42c92 634 SUPERFAMILY SSF52540 4 245 7.71E-48 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_03660 617935699fdf50fe9408914380a42c92 634 ProSitePatterns PS00211 ABC transporters family signature. 157 171 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM378_03660 617935699fdf50fe9408914380a42c92 634 Pfam PF16326 ABC transporter C-terminal domain 561 629 6.9E-21 T 15-10-2018 IPR032524 ABC transporter Uup, C-terminal GO:0003677 AM378_03660 617935699fdf50fe9408914380a42c92 634 Pfam PF00005 ABC transporter 336 469 3.7E-24 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM378_00915 77130a9b335481a427526a833cff2905 229 SMART SM00862 151 227 4.2E-22 T 15-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AM378_00915 77130a9b335481a427526a833cff2905 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 152 227 3.3E-21 T 15-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AM378_00915 77130a9b335481a427526a833cff2905 229 SUPERFAMILY SSF52172 5 175 2.78E-38 T 15-10-2018 IPR011006 CheY-like superfamily AM378_00915 77130a9b335481a427526a833cff2905 229 Gene3D G3DSA:3.40.50.2300 2 129 3.3E-34 T 15-10-2018 AM378_00915 77130a9b335481a427526a833cff2905 229 Pfam PF00072 Response regulator receiver domain 8 117 3.3E-27 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM378_00915 77130a9b335481a427526a833cff2905 229 SMART SM00448 6 116 6.7E-36 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM378_00915 77130a9b335481a427526a833cff2905 229 Gene3D G3DSA:1.10.10.10 130 229 1.9E-29 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_07240 8bf8f227d34ac5c8705e051b1c028837 229 Gene3D G3DSA:1.10.10.10 3 66 5.4E-18 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_07240 8bf8f227d34ac5c8705e051b1c028837 229 SUPERFAMILY SSF46785 7 70 6.28E-15 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM378_07240 8bf8f227d34ac5c8705e051b1c028837 229 Pfam PF00392 Bacterial regulatory proteins, gntR family 7 66 4.1E-14 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM378_07240 8bf8f227d34ac5c8705e051b1c028837 229 SMART SM00895 76 205 2.2E-8 T 15-10-2018 IPR011711 GntR, C-terminal AM378_07240 8bf8f227d34ac5c8705e051b1c028837 229 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 26 40 8.2E-5 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM378_07240 8bf8f227d34ac5c8705e051b1c028837 229 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 40 56 8.2E-5 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM378_07240 8bf8f227d34ac5c8705e051b1c028837 229 Gene3D G3DSA:1.20.120.530 80 211 1.6E-16 T 15-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AM378_07240 8bf8f227d34ac5c8705e051b1c028837 229 SMART SM00345 8 66 1.4E-13 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM378_07240 8bf8f227d34ac5c8705e051b1c028837 229 SUPERFAMILY SSF48008 87 210 2.88E-14 T 15-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AM378_07240 8bf8f227d34ac5c8705e051b1c028837 229 Pfam PF07729 FCD domain 84 204 9.3E-17 T 15-10-2018 IPR011711 GntR, C-terminal AM378_11145 a997b068f9f1075622c07c04fb70e1bb 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 67 1.6E-13 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_11145 a997b068f9f1075622c07c04fb70e1bb 303 Gene3D G3DSA:3.40.190.290 97 272 2.4E-15 T 15-10-2018 AM378_11145 a997b068f9f1075622c07c04fb70e1bb 303 SUPERFAMILY SSF53850 94 282 1.12E-14 T 15-10-2018 AM378_11145 a997b068f9f1075622c07c04fb70e1bb 303 Gene3D G3DSA:1.10.10.10 6 88 1.3E-16 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_11145 a997b068f9f1075622c07c04fb70e1bb 303 SUPERFAMILY SSF46785 7 90 4.21E-16 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM378_11145 a997b068f9f1075622c07c04fb70e1bb 303 Pfam PF03466 LysR substrate binding domain 95 282 3.9E-12 T 15-10-2018 IPR005119 LysR, substrate-binding AM378_07290 9bdb16c5b2af6a0ecbac888ef9ffb138 201 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 7 20 4.4E-9 T 15-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM378_07290 9bdb16c5b2af6a0ecbac888ef9ffb138 201 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 27 50 4.4E-9 T 15-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM378_07290 9bdb16c5b2af6a0ecbac888ef9ffb138 201 SUPERFAMILY SSF46689 3 70 1.6E-16 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AM378_07290 9bdb16c5b2af6a0ecbac888ef9ffb138 201 Pfam PF00440 Bacterial regulatory proteins, tetR family 7 51 3.8E-14 T 15-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM378_07290 9bdb16c5b2af6a0ecbac888ef9ffb138 201 Gene3D G3DSA:1.10.357.10 1 196 1.0E-35 T 15-10-2018 AM378_07290 9bdb16c5b2af6a0ecbac888ef9ffb138 201 SUPERFAMILY SSF48498 85 188 8.53E-7 T 15-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AM378_23080 0438bba740fa7c88d0514954a6e30e78 356 SUPERFAMILY SSF53187 45 319 2.73E-40 T 15-10-2018 AM378_23080 0438bba740fa7c88d0514954a6e30e78 356 Gene3D G3DSA:3.40.630.10 35 351 4.3E-47 T 15-10-2018 AM378_23080 0438bba740fa7c88d0514954a6e30e78 356 Pfam PF04389 Peptidase family M28 104 328 1.5E-32 T 15-10-2018 IPR007484 Peptidase M28 AM378_13880 4f67b87599032b68505ba35e6d7c18b2 92 Pfam PF14542 GCN5-related N-acetyl-transferase 11 90 5.4E-22 T 15-10-2018 IPR031165 Yjdj-type Gcn5-related N-acetyltransferase AM378_13880 4f67b87599032b68505ba35e6d7c18b2 92 SUPERFAMILY SSF55729 7 90 6.67E-24 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase AM378_13880 4f67b87599032b68505ba35e6d7c18b2 92 Gene3D G3DSA:3.40.630.30 4 92 5.7E-29 T 15-10-2018 AM378_04235 71f096a1f0f587bcbd71d306a2cb49b8 355 Gene3D G3DSA:3.30.70.100 13 118 4.5E-16 T 15-10-2018 AM378_04235 71f096a1f0f587bcbd71d306a2cb49b8 355 SUPERFAMILY SSF52821 123 255 5.24E-30 T 15-10-2018 IPR036873 Rhodanese-like domain superfamily AM378_04235 71f096a1f0f587bcbd71d306a2cb49b8 355 Pfam PF00581 Rhodanese-like domain 138 233 9.3E-15 T 15-10-2018 IPR001763 Rhodanese-like domain AM378_04235 71f096a1f0f587bcbd71d306a2cb49b8 355 Hamap MF_00469 UPF0176 protein YceA [yceA]. 22 277 39.137 T 15-10-2018 IPR020936 Uncharacterised protein family UPF0176 AM378_04235 71f096a1f0f587bcbd71d306a2cb49b8 355 Pfam PF12368 Rhodanase C-terminal 246 308 2.6E-19 T 15-10-2018 IPR022111 Rhodanase, C-terminal AM378_04235 71f096a1f0f587bcbd71d306a2cb49b8 355 SMART SM00450 136 237 2.9E-26 T 15-10-2018 IPR001763 Rhodanese-like domain AM378_04235 71f096a1f0f587bcbd71d306a2cb49b8 355 Gene3D G3DSA:3.40.250.10 123 270 7.1E-44 T 15-10-2018 IPR036873 Rhodanese-like domain superfamily AM378_07580 9064b9d7c2c76c4ebd00a56b6c3a7077 434 Gene3D G3DSA:1.10.287.130 163 272 9.2E-22 T 15-10-2018 AM378_07580 9064b9d7c2c76c4ebd00a56b6c3a7077 434 Gene3D G3DSA:3.30.565.10 275 424 7.2E-33 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AM378_07580 9064b9d7c2c76c4ebd00a56b6c3a7077 434 Pfam PF00512 His Kinase A (phospho-acceptor) domain 211 270 2.7E-7 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM378_07580 9064b9d7c2c76c4ebd00a56b6c3a7077 434 PRINTS PR00344 Bacterial sensor protein C-terminal signature 350 364 1.2E-11 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM378_07580 9064b9d7c2c76c4ebd00a56b6c3a7077 434 PRINTS PR00344 Bacterial sensor protein C-terminal signature 385 403 1.2E-11 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM378_07580 9064b9d7c2c76c4ebd00a56b6c3a7077 434 PRINTS PR00344 Bacterial sensor protein C-terminal signature 368 378 1.2E-11 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM378_07580 9064b9d7c2c76c4ebd00a56b6c3a7077 434 SMART SM00387 315 425 1.6E-35 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AM378_07580 9064b9d7c2c76c4ebd00a56b6c3a7077 434 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 320 423 1.4E-19 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AM378_07580 9064b9d7c2c76c4ebd00a56b6c3a7077 434 SUPERFAMILY SSF47384 194 271 1.96E-12 T 15-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AM378_07580 9064b9d7c2c76c4ebd00a56b6c3a7077 434 Pfam PF00672 HAMP domain 164 205 2.4E-6 T 15-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AM378_07580 9064b9d7c2c76c4ebd00a56b6c3a7077 434 SMART SM00388 211 271 1.3E-8 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM378_07580 9064b9d7c2c76c4ebd00a56b6c3a7077 434 SMART SM00304 158 210 4.0E-6 T 15-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AM378_07580 9064b9d7c2c76c4ebd00a56b6c3a7077 434 SUPERFAMILY SSF55874 260 423 2.75E-39 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AM378_09120 6853051615cb1122e732bfb66893d6e8 240 TIGRFAM TIGR00684 narJ: nitrate reductase molybdenum cofactor assembly chaperone 9 161 3.8E-44 T 15-10-2018 IPR003765 Nitrate reductase chaperone, NarJ GO:0051082|GO:0051131 AM378_09120 6853051615cb1122e732bfb66893d6e8 240 Gene3D G3DSA:1.10.3480.10 4 150 9.2E-8 T 15-10-2018 AM378_09120 6853051615cb1122e732bfb66893d6e8 240 SUPERFAMILY SSF89155 3 163 5.34E-31 T 15-10-2018 IPR036411 TorD-like superfamily AM378_09120 6853051615cb1122e732bfb66893d6e8 240 Pfam PF02613 Nitrate reductase delta subunit 52 157 2.2E-12 T 15-10-2018 IPR020945 DMSO/Nitrate reductase chaperone AM378_02025 c999b51158170a349d07b60dc0edac09 386 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 197 382 1.9E-17 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AM378_02025 c999b51158170a349d07b60dc0edac09 386 Gene3D G3DSA:1.10.3720.10 170 381 1.2E-29 T 15-10-2018 IPR035906 MetI-like superfamily AM378_02025 c999b51158170a349d07b60dc0edac09 386 SUPERFAMILY SSF161098 177 373 9.42E-32 T 15-10-2018 IPR035906 MetI-like superfamily AM378_01875 90eb13b4fd9b54741f4efcfdae1af99a 154 Pfam PF07308 Protein of unknown function (DUF1456) 3 70 1.1E-25 T 15-10-2018 IPR009921 Domain of unknown function DUF1456 AM378_01875 90eb13b4fd9b54741f4efcfdae1af99a 154 Pfam PF07308 Protein of unknown function (DUF1456) 86 153 7.4E-26 T 15-10-2018 IPR009921 Domain of unknown function DUF1456 AM378_04810 6d1288013cf8b315dd6b5fefedf92e5d 315 SUPERFAMILY SSF53271 69 306 3.92E-67 T 15-10-2018 IPR029057 Phosphoribosyltransferase-like AM378_04810 6d1288013cf8b315dd6b5fefedf92e5d 315 Pfam PF14572 Phosphoribosyl synthetase-associated domain 204 313 3.1E-30 T 15-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 AM378_04810 6d1288013cf8b315dd6b5fefedf92e5d 315 Hamap MF_00583_B Putative ribose-phosphate pyrophosphokinase [prs]. 4 314 49.867 T 15-10-2018 IPR037515 Ribose-phosphate pyrophosphokinase, bacterial-type GO:0004749 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 AM378_04810 6d1288013cf8b315dd6b5fefedf92e5d 315 ProSitePatterns PS00114 Phosphoribosyl pyrophosphate synthase signature. 129 144 - T 15-10-2018 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site GO:0000287|GO:0004749|GO:0009156|GO:0044249 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 AM378_04810 6d1288013cf8b315dd6b5fefedf92e5d 315 SMART SM01400 4 121 5.7E-76 T 15-10-2018 AM378_04810 6d1288013cf8b315dd6b5fefedf92e5d 315 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 4 121 1.9E-49 T 15-10-2018 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 AM378_04810 6d1288013cf8b315dd6b5fefedf92e5d 315 Gene3D G3DSA:3.40.50.2020 148 290 4.0E-137 T 15-10-2018 AM378_04810 6d1288013cf8b315dd6b5fefedf92e5d 315 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 4 314 7.0E-127 T 15-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 AM378_04810 6d1288013cf8b315dd6b5fefedf92e5d 315 Gene3D G3DSA:3.40.50.2020 7 302 4.0E-137 T 15-10-2018 AM378_17700 139a0fe2febf30c0446274d45dab3747 692 TIGRFAM TIGR01667 YCCS_YHJK: integral membrane protein, YccS/YhfK family 12 672 6.9E-188 T 15-10-2018 IPR010020 Integral membrane protein, YccS/YhfK AM378_17700 139a0fe2febf30c0446274d45dab3747 692 Pfam PF12805 FUSC-like inner membrane protein yccS 63 330 3.0E-67 T 15-10-2018 IPR032692 Integral membrane protein YccS, N-terminal AM378_17700 139a0fe2febf30c0446274d45dab3747 692 Pfam PF13515 Fusaric acid resistance protein-like 378 497 2.7E-19 T 15-10-2018 AM378_15270 96b32005ce67822ba652f00779f23c07 403 Gene3D G3DSA:3.50.50.60 9 307 1.1E-85 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AM378_15270 96b32005ce67822ba652f00779f23c07 403 Pfam PF14759 Reductase C-terminal 320 402 1.7E-19 T 15-10-2018 IPR028202 Reductase, C-terminal AM378_15270 96b32005ce67822ba652f00779f23c07 403 SUPERFAMILY SSF51905 148 310 6.12E-25 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AM378_15270 96b32005ce67822ba652f00779f23c07 403 Gene3D G3DSA:3.30.390.30 320 403 4.5E-18 T 15-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 AM378_15270 96b32005ce67822ba652f00779f23c07 403 Gene3D G3DSA:3.50.50.60 117 241 1.1E-85 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AM378_15270 96b32005ce67822ba652f00779f23c07 403 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 9 284 6.3E-51 T 15-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM378_15270 96b32005ce67822ba652f00779f23c07 403 SUPERFAMILY SSF51905 3 194 1.69E-43 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AM378_15270 96b32005ce67822ba652f00779f23c07 403 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 2.6E-21 T 15-10-2018 AM378_15270 96b32005ce67822ba652f00779f23c07 403 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 234 250 2.6E-21 T 15-10-2018 AM378_15270 96b32005ce67822ba652f00779f23c07 403 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 104 122 2.6E-21 T 15-10-2018 AM378_15270 96b32005ce67822ba652f00779f23c07 403 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 149 167 2.6E-21 T 15-10-2018 AM378_15270 96b32005ce67822ba652f00779f23c07 403 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 259 281 2.6E-21 T 15-10-2018 AM378_15270 96b32005ce67822ba652f00779f23c07 403 SUPERFAMILY SSF55424 313 402 1.15E-18 T 15-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 AM378_15270 96b32005ce67822ba652f00779f23c07 403 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 8 30 2.6E-17 T 15-10-2018 AM378_15270 96b32005ce67822ba652f00779f23c07 403 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 149 174 2.6E-17 T 15-10-2018 AM378_15270 96b32005ce67822ba652f00779f23c07 403 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 274 281 2.6E-17 T 15-10-2018 AM378_15270 96b32005ce67822ba652f00779f23c07 403 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 235 249 2.6E-17 T 15-10-2018 AM378_00065 a09abb3d5f9f977a773095f93d5fa590 287 Gene3D G3DSA:3.10.129.90 1 286 2.2E-117 T 15-10-2018 AM378_00065 a09abb3d5f9f977a773095f93d5fa590 287 Pfam PF13622 Thioesterase-like superfamily 33 282 8.8E-61 T 15-10-2018 AM378_00065 a09abb3d5f9f977a773095f93d5fa590 287 TIGRFAM TIGR00189 tesB: acyl-CoA thioesterase II 12 283 4.5E-105 T 15-10-2018 IPR003703 Acyl-CoA thioesterase GO:0006637|GO:0047617 Reactome: R-HSA-193368|Reactome: R-HSA-2046106|Reactome: R-HSA-389887|Reactome: R-HSA-390247|Reactome: R-HSA-9033241 AM378_00065 a09abb3d5f9f977a773095f93d5fa590 287 SUPERFAMILY SSF54637 116 283 7.03E-63 T 15-10-2018 IPR029069 HotDog domain superfamily AM378_00065 a09abb3d5f9f977a773095f93d5fa590 287 SUPERFAMILY SSF54637 5 114 9.39E-43 T 15-10-2018 IPR029069 HotDog domain superfamily AM378_16775 1500610fe7be6a8091e1533a049ac26f 182 Pfam PF04751 Protein of unknown function (DUF615) 25 175 1.6E-56 T 15-10-2018 IPR006839 Ribosome-associated, YjgA AM378_16775 1500610fe7be6a8091e1533a049ac26f 182 PIRSF PIRSF016183 9 182 4.5E-72 T 15-10-2018 IPR006839 Ribosome-associated, YjgA AM378_16775 1500610fe7be6a8091e1533a049ac26f 182 Gene3D G3DSA:1.10.60.30 111 182 7.3E-29 T 15-10-2018 AM378_16775 1500610fe7be6a8091e1533a049ac26f 182 Gene3D G3DSA:1.10.60.30 35 109 7.4E-21 T 15-10-2018 AM378_16775 1500610fe7be6a8091e1533a049ac26f 182 Hamap MF_00765 UPF0307 protein YjgA [yjgA]. 15 179 23.839 T 15-10-2018 IPR006839 Ribosome-associated, YjgA AM378_16775 1500610fe7be6a8091e1533a049ac26f 182 SUPERFAMILY SSF158710 36 179 7.98E-52 T 15-10-2018 IPR023153 PSPTO4464-like domain superfamily AM378_02030 6f51c5a97a9cd67bc58f64b6276b7858 311 Pfam PF00005 ABC transporter 18 163 2.9E-31 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM378_02030 6f51c5a97a9cd67bc58f64b6276b7858 311 SUPERFAMILY SSF52540 1 240 6.92E-76 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_02030 6f51c5a97a9cd67bc58f64b6276b7858 311 SMART SM00382 26 213 4.4E-15 T 15-10-2018 IPR003593 AAA+ ATPase domain AM378_02030 6f51c5a97a9cd67bc58f64b6276b7858 311 Gene3D G3DSA:3.40.50.300 1 257 1.1E-76 T 15-10-2018 AM378_02030 6f51c5a97a9cd67bc58f64b6276b7858 311 SUPERFAMILY SSF54631 266 305 2.36E-6 T 15-10-2018 AM378_02030 6f51c5a97a9cd67bc58f64b6276b7858 311 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM378_03610 38f3489ef3e79a5e4dbd385289405533 872 TIGRFAM TIGR02414 pepN_proteo: aminopeptidase N 12 870 0.0 T 15-10-2018 IPR012779 Peptidase M1, alanyl aminopeptidase GO:0008270 AM378_03610 38f3489ef3e79a5e4dbd385289405533 872 SUPERFAMILY SSF55486 204 450 2.93E-74 T 15-10-2018 AM378_03610 38f3489ef3e79a5e4dbd385289405533 872 Pfam PF11940 Domain of unknown function (DUF3458) Ig-like fold 444 544 9.4E-34 T 15-10-2018 IPR035414 Peptidase M1, alanyl aminopeptidase, Ig-like fold AM378_03610 38f3489ef3e79a5e4dbd385289405533 872 Gene3D G3DSA:2.60.40.1840 444 545 2.6E-36 T 15-10-2018 IPR038438 Alanyl aminopeptidase, Ig-like domain superfamily AM378_03610 38f3489ef3e79a5e4dbd385289405533 872 Pfam PF17432 Domain of unknown function (DUF3458_C) ARM repeats 548 870 4.3E-123 T 15-10-2018 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal AM378_03610 38f3489ef3e79a5e4dbd385289405533 872 SUPERFAMILY SSF63737 1 193 4.05E-48 T 15-10-2018 AM378_03610 38f3489ef3e79a5e4dbd385289405533 872 Gene3D G3DSA:1.25.50.10 546 871 3.9E-126 T 15-10-2018 IPR037144 Peptidase M1, alanyl aminopeptidase, C-terminal domain superfamily AM378_03610 38f3489ef3e79a5e4dbd385289405533 872 Gene3D G3DSA:1.10.390.10 280 443 5.3E-66 T 15-10-2018 IPR027268 Peptidase M4/M1, CTD superfamily AM378_03610 38f3489ef3e79a5e4dbd385289405533 872 Pfam PF01433 Peptidase family M1 domain 208 439 1.6E-59 T 15-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 AM378_03610 38f3489ef3e79a5e4dbd385289405533 872 Gene3D G3DSA:1.10.1740.60 195 279 3.0E-41 T 15-10-2018 AM378_03610 38f3489ef3e79a5e4dbd385289405533 872 Gene3D G3DSA:2.60.40.1730 15 194 9.3E-71 T 15-10-2018 AM378_03610 38f3489ef3e79a5e4dbd385289405533 872 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 258 268 1.5E-7 T 15-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 AM378_03610 38f3489ef3e79a5e4dbd385289405533 872 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 176 191 1.5E-7 T 15-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 AM378_03610 38f3489ef3e79a5e4dbd385289405533 872 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 313 325 1.5E-7 T 15-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 AM378_03610 38f3489ef3e79a5e4dbd385289405533 872 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 294 309 1.5E-7 T 15-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 AM378_24235 29eb59527e76a56465b5da5c4dedf0ff 369 Pfam PF01872 RibD C-terminal domain 148 361 2.7E-56 T 15-10-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 AM378_24235 29eb59527e76a56465b5da5c4dedf0ff 369 PIRSF PIRSF006769 1 369 1.2E-130 T 15-10-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-7991 AM378_24235 29eb59527e76a56465b5da5c4dedf0ff 369 TIGRFAM TIGR00326 eubact_ribD: riboflavin biosynthesis protein RibD 8 362 1.1E-142 T 15-10-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-7991 AM378_24235 29eb59527e76a56465b5da5c4dedf0ff 369 TIGRFAM TIGR00227 ribD_Cterm: riboflavin-specific deaminase C-terminal domain 147 365 3.6E-72 T 15-10-2018 IPR011549 Riboflavin-specific deaminase, C-terminal GO:0008703|GO:0009231|GO:0050661|GO:0055114 AM378_24235 29eb59527e76a56465b5da5c4dedf0ff 369 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 1 100 2.4E-20 T 15-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain AM378_24235 29eb59527e76a56465b5da5c4dedf0ff 369 Gene3D G3DSA:3.40.430.10 142 369 1.8E-77 T 15-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 AM378_24235 29eb59527e76a56465b5da5c4dedf0ff 369 SUPERFAMILY SSF53927 4 146 4.61E-49 T 15-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 AM378_24235 29eb59527e76a56465b5da5c4dedf0ff 369 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 51 89 - T 15-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 AM378_24235 29eb59527e76a56465b5da5c4dedf0ff 369 SUPERFAMILY SSF53597 145 364 1.2E-57 T 15-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 AM378_24235 29eb59527e76a56465b5da5c4dedf0ff 369 Gene3D G3DSA:3.40.140.10 1 141 2.0E-46 T 15-10-2018 AM378_17115 6e6898c84d2933747baeaddcf259a36d 821 TIGRFAM TIGR03703 plsB: glycerol-3-phosphate O-acyltransferase 11 798 0.0 T 15-10-2018 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109|Reactome: R-HSA-8931987|Reactome: R-HSA-9018519 AM378_17115 6e6898c84d2933747baeaddcf259a36d 821 PIRSF PIRSF500064 2 813 0.0 T 15-10-2018 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109|Reactome: R-HSA-8931987|Reactome: R-HSA-9018519 AM378_17115 6e6898c84d2933747baeaddcf259a36d 821 SMART SM00563 299 426 7.4E-28 T 15-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 AM378_17115 6e6898c84d2933747baeaddcf259a36d 821 SUPERFAMILY SSF69593 270 485 1.31E-24 T 15-10-2018 AM378_17115 6e6898c84d2933747baeaddcf259a36d 821 PIRSF PIRSF000437 19 810 0.0 T 15-10-2018 IPR022284 Glycerol-3-phosphate O-acyltransferase/Dihydroxyacetone phosphate acyltransferase GO:0008374|GO:0044255 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166 AM378_17115 6e6898c84d2933747baeaddcf259a36d 821 Hamap MF_00393 Glycerol-3-phosphate acyltransferase [plsB]. 13 806 32.659 T 15-10-2018 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109|Reactome: R-HSA-8931987|Reactome: R-HSA-9018519 AM378_17115 6e6898c84d2933747baeaddcf259a36d 821 Pfam PF01553 Acyltransferase 281 423 8.2E-26 T 15-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 AM378_10920 7a4683bde83bee7d8d682e77dddcdbfe 350 Gene3D G3DSA:2.40.160.10 32 350 8.0E-78 T 15-10-2018 IPR023614 Porin domain superfamily AM378_10920 7a4683bde83bee7d8d682e77dddcdbfe 350 Pfam PF00267 Gram-negative porin 36 349 9.1E-49 T 15-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 AM378_10920 7a4683bde83bee7d8d682e77dddcdbfe 350 PRINTS PR00183 E.coli/Salmonella-type porin signature 264 283 8.4E-12 T 15-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 AM378_10920 7a4683bde83bee7d8d682e77dddcdbfe 350 PRINTS PR00183 E.coli/Salmonella-type porin signature 28 44 8.4E-12 T 15-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 AM378_10920 7a4683bde83bee7d8d682e77dddcdbfe 350 PRINTS PR00183 E.coli/Salmonella-type porin signature 97 119 8.4E-12 T 15-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 AM378_10920 7a4683bde83bee7d8d682e77dddcdbfe 350 PRINTS PR00183 E.coli/Salmonella-type porin signature 235 252 8.4E-12 T 15-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 AM378_10920 7a4683bde83bee7d8d682e77dddcdbfe 350 SUPERFAMILY SSF56935 32 333 9.94E-39 T 15-10-2018 AM378_24270 db6173b135b6bf5ea15c6358d79ddaef 306 Gene3D G3DSA:1.10.600.10 9 306 2.6E-104 T 15-10-2018 IPR008949 Isoprenoid synthase domain superfamily AM378_24270 db6173b135b6bf5ea15c6358d79ddaef 306 Pfam PF00348 Polyprenyl synthetase 42 269 3.4E-56 T 15-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 AM378_24270 db6173b135b6bf5ea15c6358d79ddaef 306 SUPERFAMILY SSF48576 10 288 3.7E-85 T 15-10-2018 IPR008949 Isoprenoid synthase domain superfamily AM378_24270 db6173b135b6bf5ea15c6358d79ddaef 306 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 88 104 - T 15-10-2018 IPR033749 Polyprenyl synthetase, conserved site AM378_24270 db6173b135b6bf5ea15c6358d79ddaef 306 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 222 234 - T 15-10-2018 IPR033749 Polyprenyl synthetase, conserved site AM378_05345 c66c2c6c8b6a7b0e7085133ea24346ae 682 Pfam PF11818 C-terminal domain of tail specific protease (DUF3340) 534 667 1.5E-40 T 15-10-2018 IPR020992 Tail specific protease, C-terminal AM378_05345 c66c2c6c8b6a7b0e7085133ea24346ae 682 SMART SM00228 246 323 9.5E-10 T 15-10-2018 IPR001478 PDZ domain GO:0005515 AM378_05345 c66c2c6c8b6a7b0e7085133ea24346ae 682 Gene3D G3DSA:2.30.42.10 246 338 1.6E-16 T 15-10-2018 AM378_05345 c66c2c6c8b6a7b0e7085133ea24346ae 682 Gene3D G3DSA:3.90.226.10 339 545 3.7E-50 T 15-10-2018 AM378_05345 c66c2c6c8b6a7b0e7085133ea24346ae 682 Pfam PF03572 Peptidase family S41 356 528 4.0E-51 T 15-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 AM378_05345 c66c2c6c8b6a7b0e7085133ea24346ae 682 SUPERFAMILY SSF52096 179 535 1.82E-67 T 15-10-2018 IPR029045 ClpP/crotonase-like domain superfamily AM378_05345 c66c2c6c8b6a7b0e7085133ea24346ae 682 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 194 551 1.2E-123 T 15-10-2018 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 AM378_05345 c66c2c6c8b6a7b0e7085133ea24346ae 682 SMART SM00245 326 531 2.5E-74 T 15-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 AM378_05345 c66c2c6c8b6a7b0e7085133ea24346ae 682 SUPERFAMILY SSF50156 216 343 6.37E-17 T 15-10-2018 IPR036034 PDZ superfamily GO:0005515 AM378_05345 c66c2c6c8b6a7b0e7085133ea24346ae 682 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 240 320 1.8E-14 T 15-10-2018 IPR001478 PDZ domain GO:0005515 AM378_06220 1bbe4455bd49292a865d09bf5fcd7d2e 122 Pfam PF06932 Protein of unknown function (DUF1283) 39 122 5.6E-40 T 15-10-2018 IPR009700 Protein of unknown function DUF1283 AM378_06220 1bbe4455bd49292a865d09bf5fcd7d2e 122 Hamap MF_01581 UPF0482 protein YnfB [ynfB]. 1 122 32.351 T 15-10-2018 IPR009700 Protein of unknown function DUF1283 AM378_06220 1bbe4455bd49292a865d09bf5fcd7d2e 122 ProDom PD073251 YNFB PERIPLASMIC SECRETED ORF9 PRECURSOR SIGNAL SIMILAR ECS2289 EXPORTED ESCHERICHIA 29 122 2.0E-22 T 15-10-2018 IPR009700 Protein of unknown function DUF1283 AM378_22375 c6ec4721c09e47e1905e40556ad25330 333 SUPERFAMILY SSF51735 116 282 7.32E-33 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily AM378_22375 c6ec4721c09e47e1905e40556ad25330 333 Gene3D G3DSA:3.40.50.720 127 272 4.3E-95 T 15-10-2018 AM378_22375 c6ec4721c09e47e1905e40556ad25330 333 Gene3D G3DSA:3.90.180.10 23 330 4.3E-95 T 15-10-2018 AM378_22375 c6ec4721c09e47e1905e40556ad25330 333 SUPERFAMILY SSF50129 11 142 1.05E-30 T 15-10-2018 IPR011032 GroES-like superfamily AM378_22375 c6ec4721c09e47e1905e40556ad25330 333 SMART SM00829 15 331 3.3E-10 T 15-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AM378_22375 c6ec4721c09e47e1905e40556ad25330 333 Pfam PF13602 Zinc-binding dehydrogenase 192 331 2.7E-20 T 15-10-2018 AM378_22375 c6ec4721c09e47e1905e40556ad25330 333 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 30 88 3.9E-8 T 15-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AM378_22375 c6ec4721c09e47e1905e40556ad25330 333 TIGRFAM TIGR02817 adh_fam_1: zinc-binding alcohol dehydrogenase family protein 12 331 6.1E-115 T 15-10-2018 IPR014182 Alcohol dehydrogenase, zinc-binding type 1 GO:0008270 AM378_04475 0e5d6685026d5346211858f7eef487c4 1047 Gene3D G3DSA:3.30.2090.10 181 278 0.0 T 15-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AM378_04475 0e5d6685026d5346211858f7eef487c4 1047 Gene3D G3DSA:3.30.70.1440 676 874 0.0 T 15-10-2018 AM378_04475 0e5d6685026d5346211858f7eef487c4 1047 SUPERFAMILY SSF82866 812 1037 3.27E-42 T 15-10-2018 AM378_04475 0e5d6685026d5346211858f7eef487c4 1047 Gene3D G3DSA:3.30.70.1430 577 675 0.0 T 15-10-2018 AM378_04475 0e5d6685026d5346211858f7eef487c4 1047 Gene3D G3DSA:1.20.1640.10 523 1031 0.0 T 15-10-2018 AM378_04475 0e5d6685026d5346211858f7eef487c4 1047 SUPERFAMILY SSF82693 139 333 6.98E-27 T 15-10-2018 AM378_04475 0e5d6685026d5346211858f7eef487c4 1047 SUPERFAMILY SSF82693 575 678 1.52E-20 T 15-10-2018 AM378_04475 0e5d6685026d5346211858f7eef487c4 1047 PRINTS PR00702 Acriflavin resistance protein family signature 366 387 1.8E-88 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AM378_04475 0e5d6685026d5346211858f7eef487c4 1047 PRINTS PR00702 Acriflavin resistance protein family signature 394 418 1.8E-88 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AM378_04475 0e5d6685026d5346211858f7eef487c4 1047 PRINTS PR00702 Acriflavin resistance protein family signature 472 495 1.8E-88 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AM378_04475 0e5d6685026d5346211858f7eef487c4 1047 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 1.8E-88 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AM378_04475 0e5d6685026d5346211858f7eef487c4 1047 PRINTS PR00702 Acriflavin resistance protein family signature 562 579 1.8E-88 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AM378_04475 0e5d6685026d5346211858f7eef487c4 1047 PRINTS PR00702 Acriflavin resistance protein family signature 339 362 1.8E-88 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AM378_04475 0e5d6685026d5346211858f7eef487c4 1047 PRINTS PR00702 Acriflavin resistance protein family signature 447 470 1.8E-88 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AM378_04475 0e5d6685026d5346211858f7eef487c4 1047 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 1.8E-88 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AM378_04475 0e5d6685026d5346211858f7eef487c4 1047 PRINTS PR00702 Acriflavin resistance protein family signature 631 645 1.8E-88 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AM378_04475 0e5d6685026d5346211858f7eef487c4 1047 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 3 1045 0.0 T 15-10-2018 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0006855|GO:0015562|GO:0016021 AM378_04475 0e5d6685026d5346211858f7eef487c4 1047 Gene3D G3DSA:3.30.70.1430 40 824 0.0 T 15-10-2018 AM378_04475 0e5d6685026d5346211858f7eef487c4 1047 SUPERFAMILY SSF82714 729 815 1.96E-18 T 15-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AM378_04475 0e5d6685026d5346211858f7eef487c4 1047 Gene3D G3DSA:3.30.70.1320 135 335 0.0 T 15-10-2018 AM378_04475 0e5d6685026d5346211858f7eef487c4 1047 Gene3D G3DSA:1.20.1640.10 10 522 0.0 T 15-10-2018 AM378_04475 0e5d6685026d5346211858f7eef487c4 1047 SUPERFAMILY SSF82866 299 499 2.22E-50 T 15-10-2018 AM378_04475 0e5d6685026d5346211858f7eef487c4 1047 SUPERFAMILY SSF82714 185 275 5.23E-22 T 15-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AM378_04475 0e5d6685026d5346211858f7eef487c4 1047 Pfam PF00873 AcrB/AcrD/AcrF family 3 1034 0.0 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AM378_04475 0e5d6685026d5346211858f7eef487c4 1047 Gene3D G3DSA:3.30.2090.10 728 816 0.0 T 15-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AM378_04475 0e5d6685026d5346211858f7eef487c4 1047 SUPERFAMILY SSF82693 41 134 3.14E-27 T 15-10-2018 AM378_06090 857204264d46561af1097c48d9ebc78f 293 Gene3D G3DSA:3.40.190.10 162 256 9.8E-54 T 15-10-2018 AM378_06090 857204264d46561af1097c48d9ebc78f 293 SUPERFAMILY SSF53850 93 289 2.9E-35 T 15-10-2018 AM378_06090 857204264d46561af1097c48d9ebc78f 293 Gene3D G3DSA:3.40.190.10 102 282 9.8E-54 T 15-10-2018 AM378_06090 857204264d46561af1097c48d9ebc78f 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 1.9E-9 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_06090 857204264d46561af1097c48d9ebc78f 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 1.9E-9 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_06090 857204264d46561af1097c48d9ebc78f 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 1.9E-9 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_06090 857204264d46561af1097c48d9ebc78f 293 Pfam PF03466 LysR substrate binding domain 91 286 1.0E-36 T 15-10-2018 IPR005119 LysR, substrate-binding AM378_06090 857204264d46561af1097c48d9ebc78f 293 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 66 1.2E-17 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_06090 857204264d46561af1097c48d9ebc78f 293 SUPERFAMILY SSF46785 2 86 4.18E-21 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM378_06090 857204264d46561af1097c48d9ebc78f 293 Gene3D G3DSA:1.10.10.10 5 92 3.5E-22 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_04035 871cd4c3c47621b6959b36e3942bd213 218 SMART SM00421 146 203 1.5E-18 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM378_04035 871cd4c3c47621b6959b36e3942bd213 218 SUPERFAMILY SSF46894 136 210 3.23E-19 T 15-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AM378_04035 871cd4c3c47621b6959b36e3942bd213 218 Pfam PF00196 Bacterial regulatory proteins, luxR family 148 203 2.5E-19 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM378_04035 871cd4c3c47621b6959b36e3942bd213 218 ProSitePatterns PS00622 LuxR-type HTH domain signature. 163 190 - T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM378_04035 871cd4c3c47621b6959b36e3942bd213 218 SUPERFAMILY SSF52172 3 131 2.99E-33 T 15-10-2018 IPR011006 CheY-like superfamily AM378_04035 871cd4c3c47621b6959b36e3942bd213 218 Pfam PF00072 Response regulator receiver domain 4 115 1.2E-30 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM378_04035 871cd4c3c47621b6959b36e3942bd213 218 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 163 179 7.0E-11 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM378_04035 871cd4c3c47621b6959b36e3942bd213 218 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 149 163 7.0E-11 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM378_04035 871cd4c3c47621b6959b36e3942bd213 218 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 179 191 7.0E-11 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM378_04035 871cd4c3c47621b6959b36e3942bd213 218 SMART SM00448 2 115 4.9E-30 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM378_04035 871cd4c3c47621b6959b36e3942bd213 218 Gene3D G3DSA:3.40.50.12740 2 209 1.3E-59 T 15-10-2018 AM378_24145 bf7144cd4adc7132d3b1858a4330e53e 229 SMART SM00448 3 116 3.2E-44 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM378_24145 bf7144cd4adc7132d3b1858a4330e53e 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 151 225 2.1E-28 T 15-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AM378_24145 bf7144cd4adc7132d3b1858a4330e53e 229 Gene3D G3DSA:1.10.10.10 128 229 2.7E-42 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_24145 bf7144cd4adc7132d3b1858a4330e53e 229 Pfam PF00072 Response regulator receiver domain 5 117 1.5E-27 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM378_24145 bf7144cd4adc7132d3b1858a4330e53e 229 SMART SM00862 150 225 2.7E-27 T 15-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AM378_24145 bf7144cd4adc7132d3b1858a4330e53e 229 SUPERFAMILY SSF52172 3 126 1.85E-42 T 15-10-2018 IPR011006 CheY-like superfamily AM378_24145 bf7144cd4adc7132d3b1858a4330e53e 229 SUPERFAMILY SSF46894 129 226 1.87E-32 T 15-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AM378_24145 bf7144cd4adc7132d3b1858a4330e53e 229 TIGRFAM TIGR02154 PhoB: phosphate regulon transcriptional regulatory protein PhoB 1 226 7.0E-115 T 15-10-2018 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB GO:0000156|GO:0000160|GO:0003677|GO:0006817 AM378_24145 bf7144cd4adc7132d3b1858a4330e53e 229 Gene3D G3DSA:3.40.50.2300 1 127 2.1E-37 T 15-10-2018 AM378_00535 bc70623db16b1d8f500de172133efc5f 461 TIGRFAM TIGR00435 cysS: cysteine--tRNA ligase 2 460 1.6E-192 T 15-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 AM378_00535 bc70623db16b1d8f500de172133efc5f 461 Gene3D G3DSA:3.40.50.620 1 305 1.4E-132 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM378_00535 bc70623db16b1d8f500de172133efc5f 461 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 15 313 3.8E-139 T 15-10-2018 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 AM378_00535 bc70623db16b1d8f500de172133efc5f 461 SUPERFAMILY SSF47323 316 460 2.48E-43 T 15-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM378_00535 bc70623db16b1d8f500de172133efc5f 461 Gene3D G3DSA:1.20.120.640 306 461 1.0E-57 T 15-10-2018 AM378_00535 bc70623db16b1d8f500de172133efc5f 461 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 25 36 7.2E-30 T 15-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 AM378_00535 bc70623db16b1d8f500de172133efc5f 461 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 191 209 7.2E-30 T 15-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 AM378_00535 bc70623db16b1d8f500de172133efc5f 461 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 222 243 7.2E-30 T 15-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 AM378_00535 bc70623db16b1d8f500de172133efc5f 461 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 61 70 7.2E-30 T 15-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 AM378_00535 bc70623db16b1d8f500de172133efc5f 461 SMART SM00840 341 402 1.9E-29 T 15-10-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 AM378_00535 bc70623db16b1d8f500de172133efc5f 461 Pfam PF09190 DALR domain 341 402 1.4E-25 T 15-10-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 AM378_00535 bc70623db16b1d8f500de172133efc5f 461 Hamap MF_00041 Cysteine--tRNA ligase [cysS]. 2 461 38.739 T 15-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 AM378_00535 bc70623db16b1d8f500de172133efc5f 461 SUPERFAMILY SSF52374 1 313 8.45E-99 T 15-10-2018 AM378_23250 2826d8a1f492806d32acfe1bae7f4526 61 SUPERFAMILY SSF117130 1 54 3.66E-21 T 15-10-2018 IPR036107 Carbon storage regulator superfamily GO:0003723|GO:0006109|GO:0006402 AM378_23250 2826d8a1f492806d32acfe1bae7f4526 61 TIGRFAM TIGR00202 csrA: carbon storage regulator 1 58 2.3E-31 T 15-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 AM378_23250 2826d8a1f492806d32acfe1bae7f4526 61 ProDom PD009007 STORAGE CARBON REGULATOR RNA-BINDING HOMOLOG CSRA REGULATOR GLOBAL PLASMID RSMA 1 48 2.0E-20 T 15-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 AM378_23250 2826d8a1f492806d32acfe1bae7f4526 61 Hamap MF_00167 Translational regulator CsrA [csrA]. 1 60 17.231 T 15-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 AM378_23250 2826d8a1f492806d32acfe1bae7f4526 61 Gene3D G3DSA:3.30.70.1680 1 61 7.2E-32 T 15-10-2018 IPR036107 Carbon storage regulator superfamily GO:0003723|GO:0006109|GO:0006402 AM378_23250 2826d8a1f492806d32acfe1bae7f4526 61 Pfam PF02599 Global regulator protein family 1 52 2.5E-27 T 15-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 AM378_01790 c7576bc5eff0f31a17b1f796254a770e 291 Gene3D G3DSA:3.10.310.10 119 267 3.0E-80 T 15-10-2018 AM378_01790 c7576bc5eff0f31a17b1f796254a770e 291 Pfam PF01678 Diaminopimelate epimerase 6 123 8.3E-22 T 15-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 AM378_01790 c7576bc5eff0f31a17b1f796254a770e 291 Pfam PF01678 Diaminopimelate epimerase 153 266 2.6E-23 T 15-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 AM378_01790 c7576bc5eff0f31a17b1f796254a770e 291 TIGRFAM TIGR00652 DapF: diaminopimelate epimerase 6 268 2.3E-66 T 15-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 AM378_01790 c7576bc5eff0f31a17b1f796254a770e 291 SUPERFAMILY SSF54506 139 271 6.06E-40 T 15-10-2018 AM378_01790 c7576bc5eff0f31a17b1f796254a770e 291 SUPERFAMILY SSF54506 5 129 3.03E-28 T 15-10-2018 AM378_01790 c7576bc5eff0f31a17b1f796254a770e 291 Hamap MF_00197 Diaminopimelate epimerase [dapF]. 4 274 30.324 T 15-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 AM378_01790 c7576bc5eff0f31a17b1f796254a770e 291 Gene3D G3DSA:3.10.310.10 6 118 3.0E-80 T 15-10-2018 AM378_01935 8a437c0c42311898a1844d0ba5500406 170 Pfam PF09933 Predicted small integral membrane protein (DUF2165) 8 165 1.3E-33 T 15-10-2018 IPR018681 Protein of unknown function DUF2165, transmembrane AM378_10045 414f9e74797f7ada04d944760367b5fe 151 SUPERFAMILY SSF103247 31 148 2.35E-24 T 15-10-2018 IPR035923 TT1751-like domain superfamily AM378_10045 414f9e74797f7ada04d944760367b5fe 151 Gene3D G3DSA:3.30.310.70 28 150 3.5E-11 T 15-10-2018 IPR035923 TT1751-like domain superfamily AM378_10045 414f9e74797f7ada04d944760367b5fe 151 Pfam PF03625 Domain of unknown function DUF302 60 120 5.0E-14 T 15-10-2018 IPR005180 Domain of unknown function DUF302 AM378_23030 0b4d1222988ebfb766aae33fb203a161 397 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 202 216 - T 15-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 AM378_23030 0b4d1222988ebfb766aae33fb203a161 397 Gene3D G3DSA:3.40.640.10 8 261 3.4E-95 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AM378_23030 0b4d1222988ebfb766aae33fb203a161 397 TIGRFAM TIGR01328 met_gam_lyase: methionine gamma-lyase 7 395 1.4E-173 T 15-10-2018 IPR006237 L-methionine gamma-lyase GO:0018826 KEGG: 00270+4.4.1.11|KEGG: 00450+4.4.1.11|KEGG: 00920+4.4.1.2|MetaCyc: PWY-7793 AM378_23030 0b4d1222988ebfb766aae33fb203a161 397 Gene3D G3DSA:3.90.1150.10 262 394 6.3E-52 T 15-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AM378_23030 0b4d1222988ebfb766aae33fb203a161 397 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 11 393 4.8E-139 T 15-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 AM378_23030 0b4d1222988ebfb766aae33fb203a161 397 SUPERFAMILY SSF53383 29 394 4.79E-123 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM378_23030 0b4d1222988ebfb766aae33fb203a161 397 PIRSF PIRSF001434 1 397 5.7E-144 T 15-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 AM378_17540 45d53e98b9ae88d2567b52bea3a6f87c 103 TIGRFAM TIGR01049 rpsJ_bact: ribosomal protein uS10 4 101 1.0E-46 T 15-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM378_17540 45d53e98b9ae88d2567b52bea3a6f87c 103 ProSitePatterns PS00361 Ribosomal protein S10 signature. 29 44 - T 15-10-2018 IPR018268 Ribosomal protein S10, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM378_17540 45d53e98b9ae88d2567b52bea3a6f87c 103 Hamap MF_00508 30S ribosomal protein S10 [rpsJ]. 3 102 27.353 T 15-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM378_17540 45d53e98b9ae88d2567b52bea3a6f87c 103 SUPERFAMILY SSF54999 5 101 1.26E-36 T 15-10-2018 IPR036838 Ribosomal protein S10 domain superfamily AM378_17540 45d53e98b9ae88d2567b52bea3a6f87c 103 PRINTS PR00971 Ribosomal protein S10 family signature 40 55 1.2E-18 T 15-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM378_17540 45d53e98b9ae88d2567b52bea3a6f87c 103 PRINTS PR00971 Ribosomal protein S10 family signature 61 75 1.2E-18 T 15-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM378_17540 45d53e98b9ae88d2567b52bea3a6f87c 103 PRINTS PR00971 Ribosomal protein S10 family signature 5 18 1.2E-18 T 15-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM378_17540 45d53e98b9ae88d2567b52bea3a6f87c 103 Gene3D G3DSA:3.30.70.600 1 103 3.9E-38 T 15-10-2018 IPR036838 Ribosomal protein S10 domain superfamily AM378_17540 45d53e98b9ae88d2567b52bea3a6f87c 103 SMART SM01403 7 101 1.0E-56 T 15-10-2018 IPR027486 Ribosomal protein S10 domain AM378_17540 45d53e98b9ae88d2567b52bea3a6f87c 103 Pfam PF00338 Ribosomal protein S10p/S20e 7 100 2.1E-35 T 15-10-2018 IPR027486 Ribosomal protein S10 domain AM378_21480 42c8e234865e73271f6cc016089768bd 260 TIGRFAM TIGR03307 PhnP: phosphonate metabolism protein PhnP 1 246 3.4E-121 T 15-10-2018 IPR017693 Phosphonate metabolism protein PhnP GO:0008081|GO:0019700 KEGG: 00440+3.1.4.55|MetaCyc: PWY-7805|MetaCyc: PWY-7807 AM378_21480 42c8e234865e73271f6cc016089768bd 260 Gene3D G3DSA:3.60.15.10 1 253 2.1E-71 T 15-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AM378_21480 42c8e234865e73271f6cc016089768bd 260 Pfam PF12706 Beta-lactamase superfamily domain 61 221 8.2E-19 T 15-10-2018 IPR001279 Metallo-beta-lactamase AM378_21480 42c8e234865e73271f6cc016089768bd 260 SUPERFAMILY SSF56281 1 249 7.31E-40 T 15-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AM378_18640 69d35c78e68aa22073feca367732359b 482 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 349 458 3.8E-18 T 15-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 AM378_18640 69d35c78e68aa22073feca367732359b 482 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 7 326 5.0E-39 T 15-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM378_18640 69d35c78e68aa22073feca367732359b 482 PIRSF PIRSF000350 2 467 4.8E-58 T 15-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 AM378_18640 69d35c78e68aa22073feca367732359b 482 Gene3D G3DSA:3.50.50.60 7 329 5.9E-95 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AM378_18640 69d35c78e68aa22073feca367732359b 482 SUPERFAMILY SSF51905 1 365 2.14E-43 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AM378_18640 69d35c78e68aa22073feca367732359b 482 Gene3D G3DSA:3.30.390.30 346 469 4.9E-43 T 15-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 AM378_18640 69d35c78e68aa22073feca367732359b 482 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 135 153 1.8E-19 T 15-10-2018 AM378_18640 69d35c78e68aa22073feca367732359b 482 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 261 277 1.8E-19 T 15-10-2018 AM378_18640 69d35c78e68aa22073feca367732359b 482 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 1.8E-19 T 15-10-2018 AM378_18640 69d35c78e68aa22073feca367732359b 482 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 291 313 1.8E-19 T 15-10-2018 AM378_18640 69d35c78e68aa22073feca367732359b 482 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 174 192 1.8E-19 T 15-10-2018 AM378_18640 69d35c78e68aa22073feca367732359b 482 Gene3D G3DSA:1.10.287.990 37 107 5.9E-95 T 15-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 AM378_18640 69d35c78e68aa22073feca367732359b 482 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 262 276 5.7E-40 T 15-10-2018 AM378_18640 69d35c78e68aa22073feca367732359b 482 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 138 147 5.7E-40 T 15-10-2018 AM378_18640 69d35c78e68aa22073feca367732359b 482 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 306 313 5.7E-40 T 15-10-2018 AM378_18640 69d35c78e68aa22073feca367732359b 482 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 5.7E-40 T 15-10-2018 AM378_18640 69d35c78e68aa22073feca367732359b 482 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 39 54 5.7E-40 T 15-10-2018 AM378_18640 69d35c78e68aa22073feca367732359b 482 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 433 453 5.7E-40 T 15-10-2018 AM378_18640 69d35c78e68aa22073feca367732359b 482 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 411 426 5.7E-40 T 15-10-2018 AM378_18640 69d35c78e68aa22073feca367732359b 482 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 343 364 5.7E-40 T 15-10-2018 AM378_18640 69d35c78e68aa22073feca367732359b 482 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 174 199 5.7E-40 T 15-10-2018 AM378_18640 69d35c78e68aa22073feca367732359b 482 Gene3D G3DSA:3.50.50.60 147 268 5.9E-95 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AM378_18640 69d35c78e68aa22073feca367732359b 482 SUPERFAMILY SSF55424 348 465 9.62E-26 T 15-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 AM378_10970 2022d61d23426b8cd9584e0486e0e42c 276 Gene3D G3DSA:3.40.50.1820 3 272 1.1E-73 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold AM378_10970 2022d61d23426b8cd9584e0486e0e42c 276 Pfam PF00561 alpha/beta hydrolase fold 22 253 5.1E-21 T 15-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AM378_10970 2022d61d23426b8cd9584e0486e0e42c 276 SUPERFAMILY SSF53474 4 272 2.96E-57 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold AM378_10970 2022d61d23426b8cd9584e0486e0e42c 276 PRINTS PR00111 Alpha/beta hydrolase fold signature 91 104 2.2E-11 T 15-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AM378_10970 2022d61d23426b8cd9584e0486e0e42c 276 PRINTS PR00111 Alpha/beta hydrolase fold signature 47 62 2.2E-11 T 15-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AM378_10970 2022d61d23426b8cd9584e0486e0e42c 276 PRINTS PR00111 Alpha/beta hydrolase fold signature 216 230 2.2E-11 T 15-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AM378_10970 2022d61d23426b8cd9584e0486e0e42c 276 PRINTS PR00412 Epoxide hydrolase signature 27 45 4.0E-6 T 15-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AM378_10970 2022d61d23426b8cd9584e0486e0e42c 276 PRINTS PR00412 Epoxide hydrolase signature 248 270 4.0E-6 T 15-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AM378_10970 2022d61d23426b8cd9584e0486e0e42c 276 PRINTS PR00412 Epoxide hydrolase signature 47 62 4.0E-6 T 15-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AM378_10170 5ce4c6bc3fd64256b35f35877e7ecddc 108 Pfam PF01022 Bacterial regulatory protein, arsR family 15 60 3.3E-14 T 15-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AM378_10170 5ce4c6bc3fd64256b35f35877e7ecddc 108 SUPERFAMILY SSF46785 3 102 7.88E-28 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM378_10170 5ce4c6bc3fd64256b35f35877e7ecddc 108 SMART SM00418 8 86 9.4E-28 T 15-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AM378_10170 5ce4c6bc3fd64256b35f35877e7ecddc 108 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 10 25 8.6E-24 T 15-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AM378_10170 5ce4c6bc3fd64256b35f35877e7ecddc 108 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 30 41 8.6E-24 T 15-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AM378_10170 5ce4c6bc3fd64256b35f35877e7ecddc 108 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 43 58 8.6E-24 T 15-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AM378_10170 5ce4c6bc3fd64256b35f35877e7ecddc 108 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 58 73 8.6E-24 T 15-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AM378_10170 5ce4c6bc3fd64256b35f35877e7ecddc 108 Gene3D G3DSA:1.10.10.10 5 98 1.3E-25 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_01025 b4658e385a59cd12c2fe9f4a9c67c8ea 238 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 5 111 9.2E-32 T 15-10-2018 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 AM378_01025 b4658e385a59cd12c2fe9f4a9c67c8ea 238 SUPERFAMILY SSF46548 107 237 1.92E-40 T 15-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 AM378_01025 b4658e385a59cd12c2fe9f4a9c67c8ea 238 Gene3D G3DSA:3.10.20.30 1 106 4.8E-34 T 15-10-2018 IPR012675 Beta-grasp domain superfamily AM378_01025 b4658e385a59cd12c2fe9f4a9c67c8ea 238 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 149 160 - T 15-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AM378_01025 b4658e385a59cd12c2fe9f4a9c67c8ea 238 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 7 230 8.2E-91 T 15-10-2018 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 AM378_01025 b4658e385a59cd12c2fe9f4a9c67c8ea 238 Pfam PF13534 4Fe-4S dicluster domain 148 221 4.4E-10 T 15-10-2018 AM378_01025 b4658e385a59cd12c2fe9f4a9c67c8ea 238 SUPERFAMILY SSF54292 1 106 1.67E-30 T 15-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 AM378_01025 b4658e385a59cd12c2fe9f4a9c67c8ea 238 Gene3D G3DSA:1.10.1060.10 107 238 1.2E-59 T 15-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 AM378_04615 e93cf486a58815ee0e1c91d955bc7c0e 537 SMART SM00387 423 531 1.6E-21 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AM378_04615 e93cf486a58815ee0e1c91d955bc7c0e 537 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 428 529 7.4E-16 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AM378_04615 e93cf486a58815ee0e1c91d955bc7c0e 537 Gene3D G3DSA:3.30.565.10 389 536 2.7E-29 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AM378_04615 e93cf486a58815ee0e1c91d955bc7c0e 537 Gene3D G3DSA:3.30.450.20 201 318 7.5E-25 T 15-10-2018 AM378_04615 e93cf486a58815ee0e1c91d955bc7c0e 537 PRINTS PR00344 Bacterial sensor protein C-terminal signature 491 509 2.3E-12 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM378_04615 e93cf486a58815ee0e1c91d955bc7c0e 537 PRINTS PR00344 Bacterial sensor protein C-terminal signature 462 476 2.3E-12 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM378_04615 e93cf486a58815ee0e1c91d955bc7c0e 537 PRINTS PR00344 Bacterial sensor protein C-terminal signature 515 528 2.3E-12 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM378_04615 e93cf486a58815ee0e1c91d955bc7c0e 537 PRINTS PR00344 Bacterial sensor protein C-terminal signature 480 490 2.3E-12 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM378_04615 e93cf486a58815ee0e1c91d955bc7c0e 537 SUPERFAMILY SSF55785 214 315 3.4E-5 T 15-10-2018 IPR035965 PAS domain superfamily AM378_04615 e93cf486a58815ee0e1c91d955bc7c0e 537 Pfam PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain 327 377 2.3E-10 T 15-10-2018 IPR039506 SpoOB, alpha-helical domain AM378_04615 e93cf486a58815ee0e1c91d955bc7c0e 537 SUPERFAMILY SSF103190 42 171 3.4E-37 T 15-10-2018 IPR029151 Periplasmic sensor-like domain superfamily AM378_04615 e93cf486a58815ee0e1c91d955bc7c0e 537 SUPERFAMILY SSF55890 329 396 5.23E-14 T 15-10-2018 IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB GO:0000155|GO:0000160|GO:0016772 AM378_04615 e93cf486a58815ee0e1c91d955bc7c0e 537 SUPERFAMILY SSF55874 423 528 2.75E-28 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AM378_04615 e93cf486a58815ee0e1c91d955bc7c0e 537 Gene3D G3DSA:3.30.450.20 34 174 2.9E-42 T 15-10-2018 AM378_04615 e93cf486a58815ee0e1c91d955bc7c0e 537 Pfam PF17203 Single cache domain 3 39 172 2.7E-18 T 15-10-2018 IPR033463 Single cache domain 3 AM378_02155 4ca0f6784b8bb9efddd0a333fa7b1ce0 209 Pfam PF01810 LysE type translocator 16 206 1.2E-31 T 15-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AM378_02155 4ca0f6784b8bb9efddd0a333fa7b1ce0 209 PIRSF PIRSF006324 1 208 4.6E-50 T 15-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AM378_01205 e8b6f1427a9b8fd3cda8d5b915bf1a50 347 Pfam PF01263 Aldose 1-epimerase 18 343 1.2E-79 T 15-10-2018 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 AM378_01205 e8b6f1427a9b8fd3cda8d5b915bf1a50 347 SUPERFAMILY SSF74650 3 344 3.2E-101 T 15-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 AM378_01205 e8b6f1427a9b8fd3cda8d5b915bf1a50 347 PIRSF PIRSF005096 1 346 3.4E-114 T 15-10-2018 IPR015443 Aldose 1-epimerase GO:0016853|GO:0019318 KEGG: 00010+5.1.3.3|KEGG: 00052+5.1.3.3|MetaCyc: PWY-6317 AM378_01205 e8b6f1427a9b8fd3cda8d5b915bf1a50 347 Gene3D G3DSA:2.70.98.10 6 346 9.7E-108 T 15-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 AM378_01205 e8b6f1427a9b8fd3cda8d5b915bf1a50 347 ProSitePatterns PS00545 Aldose 1-epimerase putative active site. 171 180 - T 15-10-2018 IPR018052 Aldose 1-epimerase, conserved site KEGG: 00010+5.1.3.3|KEGG: 00052+5.1.3.3|MetaCyc: PWY-6317 AM378_01205 e8b6f1427a9b8fd3cda8d5b915bf1a50 347 TIGRFAM TIGR02636 galM_Leloir: galactose mutarotase 12 344 2.9E-135 T 15-10-2018 IPR013458 Aldose 1-epimerase, bacterial GO:0004034|GO:0006012 KEGG: 00010+5.1.3.3|KEGG: 00052+5.1.3.3|MetaCyc: PWY-6317 AM378_19245 a5a3a804c6f519e84c180b33c82b90bd 330 Pfam PF03590 Aspartate-ammonia ligase 9 244 1.2E-94 T 15-10-2018 IPR004618 Aspartate--ammonia ligase GO:0004071|GO:0005737|GO:0006529 KEGG: 00250+6.3.1.1|KEGG: 00460+6.3.1.1 AM378_19245 a5a3a804c6f519e84c180b33c82b90bd 330 Gene3D G3DSA:3.30.930.10 1 330 1.1E-141 T 15-10-2018 AM378_19245 a5a3a804c6f519e84c180b33c82b90bd 330 PIRSF PIRSF001555 1 329 2.2E-151 T 15-10-2018 IPR004618 Aspartate--ammonia ligase GO:0004071|GO:0005737|GO:0006529 KEGG: 00250+6.3.1.1|KEGG: 00460+6.3.1.1 AM378_19245 a5a3a804c6f519e84c180b33c82b90bd 330 TIGRFAM TIGR00669 asnA: aspartate--ammonia ligase 1 330 4.2E-181 T 15-10-2018 IPR004618 Aspartate--ammonia ligase GO:0004071|GO:0005737|GO:0006529 KEGG: 00250+6.3.1.1|KEGG: 00460+6.3.1.1 AM378_19245 a5a3a804c6f519e84c180b33c82b90bd 330 Hamap MF_00555 Aspartate--ammonia ligase [asnA]. 1 330 45.36 T 15-10-2018 IPR004618 Aspartate--ammonia ligase GO:0004071|GO:0005737|GO:0006529 KEGG: 00250+6.3.1.1|KEGG: 00460+6.3.1.1 AM378_19245 a5a3a804c6f519e84c180b33c82b90bd 330 SUPERFAMILY SSF55681 5 323 2.25E-98 T 15-10-2018 AM378_08895 e5cd4046f2983fff1bc8a866e2dcf3a4 189 Pfam PF02659 Putative manganese efflux pump 31 181 3.7E-55 T 15-10-2018 IPR003810 Putative manganese efflux pump AM378_08895 e5cd4046f2983fff1bc8a866e2dcf3a4 189 Hamap MF_01521 Probable manganese efflux pump MntP [mntP]. 1 184 25.62 T 15-10-2018 IPR022929 Putative manganese efflux pump MntP AM378_08560 93b65eac539221802025c0651a64b3dc 340 Gene3D G3DSA:1.10.8.350 53 218 3.6E-86 T 15-10-2018 AM378_08560 93b65eac539221802025c0651a64b3dc 340 SUPERFAMILY SSF53955 33 338 8.21E-93 T 15-10-2018 IPR023346 Lysozyme-like domain superfamily AM378_08560 93b65eac539221802025c0651a64b3dc 340 TIGRFAM TIGR02283 MltB_2: lytic murein transglycosylase 42 339 2.0E-114 T 15-10-2018 IPR011970 Lytic murein transglycosylase AM378_08560 93b65eac539221802025c0651a64b3dc 340 Gene3D G3DSA:1.10.530.10 85 335 3.6E-86 T 15-10-2018 AM378_08560 93b65eac539221802025c0651a64b3dc 340 Pfam PF13406 Transglycosylase SLT domain 43 336 1.3E-104 T 15-10-2018 IPR031304 Transglycosylase SLT domain 2 AM378_11465 6e0f89887c58c1d5c5d393a5ddf11f88 237 Gene3D G3DSA:3.30.70.580 63 227 1.4E-60 T 15-10-2018 AM378_11465 6e0f89887c58c1d5c5d393a5ddf11f88 237 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 99 113 - T 15-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 AM378_11465 6e0f89887c58c1d5c5d393a5ddf11f88 237 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 66 224 7.4E-57 T 15-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 AM378_11465 6e0f89887c58c1d5c5d393a5ddf11f88 237 SUPERFAMILY SSF55174 1 85 1.91E-12 T 15-10-2018 AM378_11465 6e0f89887c58c1d5c5d393a5ddf11f88 237 Pfam PF01479 S4 domain 1 47 1.8E-8 T 15-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM378_11465 6e0f89887c58c1d5c5d393a5ddf11f88 237 Gene3D G3DSA:3.30.70.1560 128 209 1.4E-60 T 15-10-2018 AM378_11465 6e0f89887c58c1d5c5d393a5ddf11f88 237 SMART SM00363 1 60 9.5E-9 T 15-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM378_11465 6e0f89887c58c1d5c5d393a5ddf11f88 237 Pfam PF00849 RNA pseudouridylate synthase 62 192 6.4E-19 T 15-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM378_11465 6e0f89887c58c1d5c5d393a5ddf11f88 237 SUPERFAMILY SSF55120 61 227 2.72E-47 T 15-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM378_11465 6e0f89887c58c1d5c5d393a5ddf11f88 237 Gene3D G3DSA:3.10.290.10 1 62 9.4E-22 T 15-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 AM378_04370 f50e98b141efe6a2097c4f3b53066bc1 212 TIGRFAM TIGR00041 DTMP_kinase: dTMP kinase 2 198 2.7E-61 T 15-10-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 AM378_04370 f50e98b141efe6a2097c4f3b53066bc1 212 ProSitePatterns PS01331 Thymidylate kinase signature. 95 107 - T 15-10-2018 IPR018095 Thymidylate kinase, conserved site GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 AM378_04370 f50e98b141efe6a2097c4f3b53066bc1 212 SUPERFAMILY SSF52540 1 206 9.19E-51 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_04370 f50e98b141efe6a2097c4f3b53066bc1 212 Pfam PF02223 Thymidylate kinase 8 198 4.4E-56 T 15-10-2018 IPR039430 Thymidylate kinase-like domain KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 AM378_04370 f50e98b141efe6a2097c4f3b53066bc1 212 Gene3D G3DSA:3.40.50.300 1 210 2.2E-60 T 15-10-2018 AM378_04370 f50e98b141efe6a2097c4f3b53066bc1 212 Hamap MF_00165 Thymidylate kinase [tmk]. 4 206 27.395 T 15-10-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 AM378_14220 2ac2d4ac6b79cdf3e7ce23db66734fc6 517 SUPERFAMILY SSF46894 2 101 1.67E-20 T 15-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AM378_14220 2ac2d4ac6b79cdf3e7ce23db66734fc6 517 Gene3D G3DSA:1.25.40.10 357 517 2.9E-32 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AM378_14220 2ac2d4ac6b79cdf3e7ce23db66734fc6 517 Pfam PF00486 Transcriptional regulatory protein, C terminal 26 100 4.3E-17 T 15-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AM378_14220 2ac2d4ac6b79cdf3e7ce23db66734fc6 517 Gene3D G3DSA:1.10.10.10 2 111 8.3E-24 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_14220 2ac2d4ac6b79cdf3e7ce23db66734fc6 517 Gene3D G3DSA:3.40.50.11830 197 356 1.2E-76 T 15-10-2018 AM378_14220 2ac2d4ac6b79cdf3e7ce23db66734fc6 517 SUPERFAMILY SSF48452 360 488 7.03E-5 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AM378_14220 2ac2d4ac6b79cdf3e7ce23db66734fc6 517 SMART SM00862 24 100 4.7E-18 T 15-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AM378_13185 d77bcbdbfc84a320d9c9eb68410c8121 263 PIRSF PIRSF000513 11 263 5.3E-94 T 15-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 AM378_13185 d77bcbdbfc84a320d9c9eb68410c8121 263 SUPERFAMILY SSF53613 10 262 1.33E-59 T 15-10-2018 IPR029056 Ribokinase-like AM378_13185 d77bcbdbfc84a320d9c9eb68410c8121 263 TIGRFAM TIGR00694 thiM: hydroxyethylthiazole kinase 17 261 6.8E-85 T 15-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 AM378_13185 d77bcbdbfc84a320d9c9eb68410c8121 263 Pfam PF02110 Hydroxyethylthiazole kinase family 17 260 9.4E-88 T 15-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 AM378_13185 d77bcbdbfc84a320d9c9eb68410c8121 263 Hamap MF_00228 Hydroxyethylthiazole kinase [thiM]. 19 263 29.93 T 15-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 AM378_13185 d77bcbdbfc84a320d9c9eb68410c8121 263 Gene3D G3DSA:3.40.1190.20 8 263 1.3E-91 T 15-10-2018 IPR029056 Ribokinase-like AM378_13185 d77bcbdbfc84a320d9c9eb68410c8121 263 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 25 32 1.2E-40 T 15-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 AM378_13185 d77bcbdbfc84a320d9c9eb68410c8121 263 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 95 112 1.2E-40 T 15-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 AM378_13185 d77bcbdbfc84a320d9c9eb68410c8121 263 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 38 59 1.2E-40 T 15-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 AM378_13185 d77bcbdbfc84a320d9c9eb68410c8121 263 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 169 186 1.2E-40 T 15-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 AM378_13185 d77bcbdbfc84a320d9c9eb68410c8121 263 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 125 139 1.2E-40 T 15-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 AM378_13185 d77bcbdbfc84a320d9c9eb68410c8121 263 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 69 77 1.2E-40 T 15-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 AM378_16585 542a8733ae1188571539e073bbfc8670 352 Gene3D G3DSA:2.40.10.10 138 254 9.7E-39 T 15-10-2018 AM378_16585 542a8733ae1188571539e073bbfc8670 352 Gene3D G3DSA:2.30.42.10 255 349 3.3E-20 T 15-10-2018 AM378_16585 542a8733ae1188571539e073bbfc8670 352 Pfam PF13180 PDZ domain 276 344 2.7E-12 T 15-10-2018 IPR001478 PDZ domain GO:0005515 AM378_16585 542a8733ae1188571539e073bbfc8670 352 SUPERFAMILY SSF50156 227 348 2.1E-19 T 15-10-2018 IPR036034 PDZ superfamily GO:0005515 AM378_16585 542a8733ae1188571539e073bbfc8670 352 PRINTS PR00834 HtrA/DegQ protease family signature 107 127 5.8E-45 T 15-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AM378_16585 542a8733ae1188571539e073bbfc8670 352 PRINTS PR00834 HtrA/DegQ protease family signature 147 171 5.8E-45 T 15-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AM378_16585 542a8733ae1188571539e073bbfc8670 352 PRINTS PR00834 HtrA/DegQ protease family signature 86 98 5.8E-45 T 15-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AM378_16585 542a8733ae1188571539e073bbfc8670 352 PRINTS PR00834 HtrA/DegQ protease family signature 204 221 5.8E-45 T 15-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AM378_16585 542a8733ae1188571539e073bbfc8670 352 PRINTS PR00834 HtrA/DegQ protease family signature 293 305 5.8E-45 T 15-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AM378_16585 542a8733ae1188571539e073bbfc8670 352 PRINTS PR00834 HtrA/DegQ protease family signature 182 199 5.8E-45 T 15-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AM378_16585 542a8733ae1188571539e073bbfc8670 352 TIGRFAM TIGR02038 protease_degS: periplasmic serine peptidase DegS 3 348 6.4E-154 T 15-10-2018 IPR011783 Peptidase S1C, DegS GO:0004252|GO:0006508 AM378_16585 542a8733ae1188571539e073bbfc8670 352 Gene3D G3DSA:2.40.10.10 29 137 1.7E-30 T 15-10-2018 AM378_16585 542a8733ae1188571539e073bbfc8670 352 SMART SM00228 253 335 2.4E-10 T 15-10-2018 IPR001478 PDZ domain GO:0005515 AM378_16585 542a8733ae1188571539e073bbfc8670 352 SUPERFAMILY SSF50494 45 250 1.14E-60 T 15-10-2018 IPR009003 Peptidase S1, PA clan AM378_16585 542a8733ae1188571539e073bbfc8670 352 Pfam PF13365 Trypsin-like peptidase domain 77 211 1.6E-30 T 15-10-2018 AM378_01450 ca9fb483584ea8c8a38c3ea9e7809b46 209 SUPERFAMILY SSF52172 1 118 1.34E-29 T 15-10-2018 IPR011006 CheY-like superfamily AM378_01450 ca9fb483584ea8c8a38c3ea9e7809b46 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 176 188 8.4E-12 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM378_01450 ca9fb483584ea8c8a38c3ea9e7809b46 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 146 160 8.4E-12 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM378_01450 ca9fb483584ea8c8a38c3ea9e7809b46 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 160 176 8.4E-12 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM378_01450 ca9fb483584ea8c8a38c3ea9e7809b46 209 Pfam PF00072 Response regulator receiver domain 4 116 5.4E-25 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM378_01450 ca9fb483584ea8c8a38c3ea9e7809b46 209 Gene3D G3DSA:3.40.50.12740 2 206 3.6E-57 T 15-10-2018 AM378_01450 ca9fb483584ea8c8a38c3ea9e7809b46 209 SMART SM00421 143 200 2.6E-20 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM378_01450 ca9fb483584ea8c8a38c3ea9e7809b46 209 SUPERFAMILY SSF46894 133 206 2.41E-20 T 15-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AM378_01450 ca9fb483584ea8c8a38c3ea9e7809b46 209 SMART SM00448 2 115 6.4E-27 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM378_01450 ca9fb483584ea8c8a38c3ea9e7809b46 209 ProSitePatterns PS00622 LuxR-type HTH domain signature. 160 187 - T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM378_01450 ca9fb483584ea8c8a38c3ea9e7809b46 209 Pfam PF00196 Bacterial regulatory proteins, luxR family 145 200 1.7E-18 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM378_00620 93e68c89387b5713f3c0cdae5295164e 69 PRINTS PR00050 Cold shock protein signature 27 36 1.4E-18 T 15-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AM378_00620 93e68c89387b5713f3c0cdae5295164e 69 PRINTS PR00050 Cold shock protein signature 6 21 1.4E-18 T 15-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AM378_00620 93e68c89387b5713f3c0cdae5295164e 69 PRINTS PR00050 Cold shock protein signature 42 60 1.4E-18 T 15-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AM378_00620 93e68c89387b5713f3c0cdae5295164e 69 PIRSF PIRSF002599 1 69 8.2E-26 T 15-10-2018 IPR012156 Cold shock, CspA GO:0003676 AM378_00620 93e68c89387b5713f3c0cdae5295164e 69 SUPERFAMILY SSF50249 3 68 7.5E-26 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold AM378_00620 93e68c89387b5713f3c0cdae5295164e 69 SMART SM00357 5 69 1.2E-33 T 15-10-2018 IPR011129 Cold shock domain GO:0003676 AM378_00620 93e68c89387b5713f3c0cdae5295164e 69 Gene3D G3DSA:2.40.50.140 1 69 2.2E-32 T 15-10-2018 AM378_00620 93e68c89387b5713f3c0cdae5295164e 69 Pfam PF00313 'Cold-shock' DNA-binding domain 5 68 2.8E-33 T 15-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AM378_00620 93e68c89387b5713f3c0cdae5295164e 69 ProSitePatterns PS00352 'Cold-shock' domain signature. 17 36 - T 15-10-2018 IPR019844 Cold-shock conserved site AM378_00365 107c087276b310c04dcc03857bb20362 488 TIGRFAM TIGR00666 PBP4: D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 57 459 3.1E-101 T 15-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AM378_00365 107c087276b310c04dcc03857bb20362 488 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 297 319 4.2E-27 T 15-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AM378_00365 107c087276b310c04dcc03857bb20362 488 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 369 383 4.2E-27 T 15-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AM378_00365 107c087276b310c04dcc03857bb20362 488 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 436 449 4.2E-27 T 15-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AM378_00365 107c087276b310c04dcc03857bb20362 488 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 354 368 4.2E-27 T 15-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AM378_00365 107c087276b310c04dcc03857bb20362 488 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 69 88 4.2E-27 T 15-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AM378_00365 107c087276b310c04dcc03857bb20362 488 Gene3D G3DSA:3.50.80.20 97 188 1.5E-20 T 15-10-2018 AM378_00365 107c087276b310c04dcc03857bb20362 488 SUPERFAMILY SSF56601 28 480 4.05E-93 T 15-10-2018 IPR012338 Beta-lactamase/transpeptidase-like AM378_00365 107c087276b310c04dcc03857bb20362 488 Gene3D G3DSA:3.40.710.10 36 96 5.9E-7 T 15-10-2018 AM378_00365 107c087276b310c04dcc03857bb20362 488 Pfam PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family 30 479 9.6E-118 T 15-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AM378_00365 107c087276b310c04dcc03857bb20362 488 Gene3D G3DSA:3.40.710.10 255 481 6.6E-58 T 15-10-2018 AM378_13575 ea158048f1cf5f018e65c64024c777c2 126 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 5 122 3.3E-23 T 15-10-2018 IPR008278 4'-phosphopantetheinyl transferase domain GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 AM378_13575 ea158048f1cf5f018e65c64024c777c2 126 Gene3D G3DSA:3.90.470.20 1 126 6.4E-39 T 15-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 AM378_13575 ea158048f1cf5f018e65c64024c777c2 126 Hamap MF_00101 Holo-[acyl-carrier-protein] synthase [acpS]. 4 126 26.422 T 15-10-2018 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 AM378_13575 ea158048f1cf5f018e65c64024c777c2 126 ProDom PD004282 TRANSFERASE SYNTHASE HOLO-ACYL-CARRIER-PROTEIN HOLO-ACP 4'-PHOSPHOPANTETHEINYL FATTY ACID METAL-BINDING MAGNESIUM LIPID 9 93 2.0E-37 T 15-10-2018 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 AM378_13575 ea158048f1cf5f018e65c64024c777c2 126 TIGRFAM TIGR00516 acpS: holo-[acyl-carrier-protein] synthase 3 126 2.7E-53 T 15-10-2018 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 AM378_13575 ea158048f1cf5f018e65c64024c777c2 126 SUPERFAMILY SSF56214 3 125 6.67E-30 T 15-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 AM378_13575 ea158048f1cf5f018e65c64024c777c2 126 TIGRFAM TIGR00556 pantethn_trn: phosphopantetheine--protein transferase domain 4 126 2.5E-36 T 15-10-2018 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 AM378_09050 325f0edafd5273848cf42523f46b854d 466 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 9 437 6.6E-166 T 15-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 AM378_09050 325f0edafd5273848cf42523f46b854d 466 PIRSF PIRSF006446 2 459 3.5E-227 T 15-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 AM378_08455 589ae397a981f2e8978d6b986848d34b 644 PIRSF PIRSF000549 1 644 2.9E-289 T 15-10-2018 IPR016230 Serine-protein kinase, PrkA GO:0004672 AM378_08455 589ae397a981f2e8978d6b986848d34b 644 Gene3D G3DSA:3.40.50.300 215 354 4.2E-5 T 15-10-2018 AM378_08455 589ae397a981f2e8978d6b986848d34b 644 Pfam PF06798 PrkA serine protein kinase C-terminal domain 383 636 1.7E-73 T 15-10-2018 IPR010650 PrkA C-terminal domain AM378_08455 589ae397a981f2e8978d6b986848d34b 644 Pfam PF08298 PrkA AAA domain 20 380 9.2E-177 T 15-10-2018 IPR013153 PrkA AAA domain AM378_08455 589ae397a981f2e8978d6b986848d34b 644 Gene3D G3DSA:3.40.50.300 74 156 6.9E-6 T 15-10-2018 AM378_08455 589ae397a981f2e8978d6b986848d34b 644 SUPERFAMILY SSF52540 75 368 3.09E-17 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_08455 589ae397a981f2e8978d6b986848d34b 644 SMART SM00763 19 380 8.3E-217 T 15-10-2018 IPR013153 PrkA AAA domain AM378_13865 d06a90e79e5579397c746eed35a13d59 308 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 13 70 1.2E-13 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_13865 d06a90e79e5579397c746eed35a13d59 308 SUPERFAMILY SSF53850 95 305 1.41E-42 T 15-10-2018 AM378_13865 d06a90e79e5579397c746eed35a13d59 308 SUPERFAMILY SSF46785 9 87 3.47E-17 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM378_13865 d06a90e79e5579397c746eed35a13d59 308 Gene3D G3DSA:3.40.190.10 179 277 3.8E-54 T 15-10-2018 AM378_13865 d06a90e79e5579397c746eed35a13d59 308 Gene3D G3DSA:3.40.190.10 95 297 3.8E-54 T 15-10-2018 AM378_13865 d06a90e79e5579397c746eed35a13d59 308 Pfam PF03466 LysR substrate binding domain 99 305 1.9E-25 T 15-10-2018 IPR005119 LysR, substrate-binding AM378_13865 d06a90e79e5579397c746eed35a13d59 308 Gene3D G3DSA:1.10.10.10 2 92 1.5E-28 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_15790 1b9a8b771fbef632ceafb927fe1fa331 298 Pfam PF03466 LysR substrate binding domain 93 293 1.3E-35 T 15-10-2018 IPR005119 LysR, substrate-binding AM378_15790 1b9a8b771fbef632ceafb927fe1fa331 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 1.4E-6 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_15790 1b9a8b771fbef632ceafb927fe1fa331 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 1.4E-6 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_15790 1b9a8b771fbef632ceafb927fe1fa331 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 1.4E-6 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_15790 1b9a8b771fbef632ceafb927fe1fa331 298 SUPERFAMILY SSF46785 5 114 9.8E-21 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM378_15790 1b9a8b771fbef632ceafb927fe1fa331 298 Gene3D G3DSA:3.40.190.10 170 269 7.5E-56 T 15-10-2018 AM378_15790 1b9a8b771fbef632ceafb927fe1fa331 298 Gene3D G3DSA:3.40.190.10 97 285 7.5E-56 T 15-10-2018 AM378_15790 1b9a8b771fbef632ceafb927fe1fa331 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 65 1.3E-17 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_15790 1b9a8b771fbef632ceafb927fe1fa331 298 Gene3D G3DSA:1.10.10.10 4 92 1.6E-25 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_15790 1b9a8b771fbef632ceafb927fe1fa331 298 SUPERFAMILY SSF53850 94 295 2.79E-35 T 15-10-2018 AM378_18485 9e1c25ebc540352909398ef3d6c46c65 310 Pfam PF00294 pfkB family carbohydrate kinase 5 304 1.3E-67 T 15-10-2018 IPR011611 Carbohydrate kinase PfkB AM378_18485 9e1c25ebc540352909398ef3d6c46c65 310 SUPERFAMILY SSF53613 5 304 9.98E-74 T 15-10-2018 IPR029056 Ribokinase-like AM378_18485 9e1c25ebc540352909398ef3d6c46c65 310 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 259 272 - T 15-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 AM378_18485 9e1c25ebc540352909398ef3d6c46c65 310 Gene3D G3DSA:3.40.1190.20 3 309 1.6E-88 T 15-10-2018 IPR029056 Ribokinase-like AM378_04735 09e9c9e2bb43fe7d32ac0028226ee5f2 249 PRINTS PR00969 Pili chaperone signature 102 119 4.3E-23 T 15-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM378_04735 09e9c9e2bb43fe7d32ac0028226ee5f2 249 PRINTS PR00969 Pili chaperone signature 25 34 4.3E-23 T 15-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM378_04735 09e9c9e2bb43fe7d32ac0028226ee5f2 249 PRINTS PR00969 Pili chaperone signature 168 183 4.3E-23 T 15-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM378_04735 09e9c9e2bb43fe7d32ac0028226ee5f2 249 PRINTS PR00969 Pili chaperone signature 129 144 4.3E-23 T 15-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM378_04735 09e9c9e2bb43fe7d32ac0028226ee5f2 249 PRINTS PR00969 Pili chaperone signature 74 95 4.3E-23 T 15-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM378_04735 09e9c9e2bb43fe7d32ac0028226ee5f2 249 SUPERFAMILY SSF49354 21 147 2.28E-34 T 15-10-2018 IPR008962 PapD-like superfamily AM378_04735 09e9c9e2bb43fe7d32ac0028226ee5f2 249 ProSitePatterns PS00635 Gram-negative pili assembly chaperone signature. 101 118 - T 15-10-2018 IPR018046 Pili assembly chaperone, conserved site AM378_04735 09e9c9e2bb43fe7d32ac0028226ee5f2 249 Gene3D G3DSA:2.60.40.10 150 247 5.0E-15 T 15-10-2018 IPR013783 Immunoglobulin-like fold AM378_04735 09e9c9e2bb43fe7d32ac0028226ee5f2 249 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 174 240 1.7E-9 T 15-10-2018 IPR016148 Pili assembly chaperone, C-terminal AM378_04735 09e9c9e2bb43fe7d32ac0028226ee5f2 249 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 25 148 1.8E-34 T 15-10-2018 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 AM378_04735 09e9c9e2bb43fe7d32ac0028226ee5f2 249 SUPERFAMILY SSF49584 141 241 5.36E-9 T 15-10-2018 IPR036316 Pili assembly chaperone, C-terminal domain superfamily AM378_04735 09e9c9e2bb43fe7d32ac0028226ee5f2 249 Gene3D G3DSA:2.60.40.10 26 148 2.0E-35 T 15-10-2018 IPR013783 Immunoglobulin-like fold AM378_21240 0adac818ff12609b8b6ee461b18c9608 312 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 1 145 4.0E-46 T 15-10-2018 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 AM378_21240 0adac818ff12609b8b6ee461b18c9608 312 SUPERFAMILY SSF51735 1 145 2.64E-39 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily AM378_21240 0adac818ff12609b8b6ee461b18c9608 312 Gene3D G3DSA:3.90.110.10 147 312 4.4E-55 T 15-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 AM378_21240 0adac818ff12609b8b6ee461b18c9608 312 TIGRFAM TIGR01772 MDH_euk_gproteo: malate dehydrogenase, NAD-dependent 2 311 4.5E-138 T 15-10-2018 IPR010097 Malate dehydrogenase, type 1 GO:0006099|GO:0030060 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383|Reactome: R-HSA-70263|Reactome: R-HSA-71403 AM378_21240 0adac818ff12609b8b6ee461b18c9608 312 Hamap MF_01516 Malate dehydrogenase [mdh]. 1 311 60.418 T 15-10-2018 IPR023958 Malate dehydrogenase, type 1, bacterial GO:0006099|GO:0030060|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 AM378_21240 0adac818ff12609b8b6ee461b18c9608 312 SUPERFAMILY SSF56327 146 311 4.79E-43 T 15-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 AM378_21240 0adac818ff12609b8b6ee461b18c9608 312 PIRSF PIRSF000102 1 311 4.5E-61 T 15-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 AM378_21240 0adac818ff12609b8b6ee461b18c9608 312 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 147 309 9.4E-52 T 15-10-2018 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 AM378_21240 0adac818ff12609b8b6ee461b18c9608 312 Gene3D G3DSA:3.40.50.720 1 146 2.1E-64 T 15-10-2018 AM378_14010 6a27e50039f673d62c45e8fc01482bc2 530 Gene3D G3DSA:3.30.565.10 389 530 8.2E-27 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AM378_14010 6a27e50039f673d62c45e8fc01482bc2 530 Gene3D G3DSA:3.30.450.20 32 163 6.6E-35 T 15-10-2018 AM378_14010 6a27e50039f673d62c45e8fc01482bc2 530 Pfam PF17203 Single cache domain 3 34 163 6.4E-20 T 15-10-2018 IPR033463 Single cache domain 3 AM378_14010 6a27e50039f673d62c45e8fc01482bc2 530 SUPERFAMILY SSF103190 37 165 2.43E-31 T 15-10-2018 IPR029151 Periplasmic sensor-like domain superfamily AM378_14010 6a27e50039f673d62c45e8fc01482bc2 530 SUPERFAMILY SSF55874 378 530 4.45E-26 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AM378_14010 6a27e50039f673d62c45e8fc01482bc2 530 SMART SM00387 420 530 1.7E-17 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AM378_14010 6a27e50039f673d62c45e8fc01482bc2 530 SUPERFAMILY SSF55785 212 313 6.63E-8 T 15-10-2018 IPR035965 PAS domain superfamily AM378_14010 6a27e50039f673d62c45e8fc01482bc2 530 SUPERFAMILY SSF55890 324 376 9.02E-6 T 15-10-2018 IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB GO:0000155|GO:0000160|GO:0016772 AM378_14010 6a27e50039f673d62c45e8fc01482bc2 530 Gene3D G3DSA:3.30.450.20 199 314 1.4E-17 T 15-10-2018 AM378_14010 6a27e50039f673d62c45e8fc01482bc2 530 Pfam PF13188 PAS domain 215 269 1.7E-4 T 15-10-2018 IPR000014 PAS domain AM378_14010 6a27e50039f673d62c45e8fc01482bc2 530 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 422 529 6.8E-15 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AM378_14010 6a27e50039f673d62c45e8fc01482bc2 530 SMART SM00091 212 281 1.7E-4 T 15-10-2018 IPR000014 PAS domain AM378_14010 6a27e50039f673d62c45e8fc01482bc2 530 PRINTS PR00344 Bacterial sensor protein C-terminal signature 516 529 1.1E-7 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM378_14010 6a27e50039f673d62c45e8fc01482bc2 530 PRINTS PR00344 Bacterial sensor protein C-terminal signature 461 475 1.1E-7 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM378_14010 6a27e50039f673d62c45e8fc01482bc2 530 PRINTS PR00344 Bacterial sensor protein C-terminal signature 479 489 1.1E-7 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM378_14010 6a27e50039f673d62c45e8fc01482bc2 530 PRINTS PR00344 Bacterial sensor protein C-terminal signature 492 510 1.1E-7 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM378_01615 2df868aa6ff378a97abf1d34529b2e7a 259 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 26 252 5.4E-53 T 15-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AM378_01615 2df868aa6ff378a97abf1d34529b2e7a 259 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 48 61 - T 15-10-2018 IPR018313 Solute-binding protein family 3, conserved site AM378_01615 2df868aa6ff378a97abf1d34529b2e7a 259 SMART SM00062 25 254 4.1E-61 T 15-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AM378_01615 2df868aa6ff378a97abf1d34529b2e7a 259 SUPERFAMILY SSF53850 1 253 3.19E-58 T 15-10-2018 AM378_01615 2df868aa6ff378a97abf1d34529b2e7a 259 Gene3D G3DSA:3.40.190.10 27 250 6.7E-71 T 15-10-2018 AM378_01615 2df868aa6ff378a97abf1d34529b2e7a 259 Gene3D G3DSA:3.40.190.10 111 211 6.7E-71 T 15-10-2018 AM378_13965 709e09fd8307842f60effbbe81bc6f26 714 TIGRFAM TIGR04170 RNR_1b_NrdE: ribonucleoside-diphosphate reductase, class 1b, alpha subunit 15 714 0.0 T 15-10-2018 IPR026459 Ribonucleotide reductase, class 1b, subunit NrdE KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AM378_13965 709e09fd8307842f60effbbe81bc6f26 714 Pfam PF08343 Ribonucleotide reductase N-terminal 16 97 1.6E-32 T 15-10-2018 IPR013554 Ribonucleotide reductase N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AM378_13965 709e09fd8307842f60effbbe81bc6f26 714 ProSitePatterns PS00089 Ribonucleotide reductase large subunit signature. 566 588 - T 15-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AM378_13965 709e09fd8307842f60effbbe81bc6f26 714 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 100 171 1.2E-11 T 15-10-2018 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AM378_13965 709e09fd8307842f60effbbe81bc6f26 714 TIGRFAM TIGR02506 NrdE_NrdA: ribonucleoside-diphosphate reductase, alpha subunit 103 696 1.3E-158 T 15-10-2018 IPR013346 Ribonucleotide reductase, class I , alpha subunit GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AM378_13965 709e09fd8307842f60effbbe81bc6f26 714 SUPERFAMILY SSF51998 175 698 6.41E-189 T 15-10-2018 AM378_13965 709e09fd8307842f60effbbe81bc6f26 714 Pfam PF02867 Ribonucleotide reductase, barrel domain 176 693 8.8E-144 T 15-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AM378_13965 709e09fd8307842f60effbbe81bc6f26 714 Gene3D G3DSA:1.10.1650.20 294 345 2.0E-29 T 15-10-2018 AM378_13965 709e09fd8307842f60effbbe81bc6f26 714 PRINTS PR01183 Ribonucleotide reductase large chain signature 465 487 8.3E-35 T 15-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AM378_13965 709e09fd8307842f60effbbe81bc6f26 714 PRINTS PR01183 Ribonucleotide reductase large chain signature 251 270 8.3E-35 T 15-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AM378_13965 709e09fd8307842f60effbbe81bc6f26 714 PRINTS PR01183 Ribonucleotide reductase large chain signature 426 449 8.3E-35 T 15-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AM378_13965 709e09fd8307842f60effbbe81bc6f26 714 PRINTS PR01183 Ribonucleotide reductase large chain signature 493 516 8.3E-35 T 15-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AM378_13965 709e09fd8307842f60effbbe81bc6f26 714 PRINTS PR01183 Ribonucleotide reductase large chain signature 382 393 8.3E-35 T 15-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AM378_13965 709e09fd8307842f60effbbe81bc6f26 714 PRINTS PR01183 Ribonucleotide reductase large chain signature 577 604 8.3E-35 T 15-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AM378_13965 709e09fd8307842f60effbbe81bc6f26 714 SUPERFAMILY SSF48168 15 174 3.66E-59 T 15-10-2018 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AM378_16990 01cd25450ed41cd5635b03ddab871bb1 222 Gene3D G3DSA:1.20.1050.10 85 211 1.7E-28 T 15-10-2018 AM378_16990 01cd25450ed41cd5635b03ddab871bb1 222 Pfam PF02798 Glutathione S-transferase, N-terminal domain 2 74 4.5E-16 T 15-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AM378_16990 01cd25450ed41cd5635b03ddab871bb1 222 SUPERFAMILY SSF52833 2 78 1.84E-20 T 15-10-2018 IPR036249 Thioredoxin-like superfamily AM378_16990 01cd25450ed41cd5635b03ddab871bb1 222 SUPERFAMILY SSF47616 83 217 3.62E-25 T 15-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily AM378_16990 01cd25450ed41cd5635b03ddab871bb1 222 Pfam PF14497 Glutathione S-transferase, C-terminal domain 139 209 1.4E-8 T 15-10-2018 IPR004046 Glutathione S-transferase, C-terminal AM378_16990 01cd25450ed41cd5635b03ddab871bb1 222 Gene3D G3DSA:3.40.30.10 1 84 2.1E-35 T 15-10-2018 AM378_03180 a9295b5a0a933b1d051ea2ade07534bb 309 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 68 252 8.2E-14 T 15-10-2018 IPR000477 Reverse transcriptase domain AM378_03180 a9295b5a0a933b1d051ea2ade07534bb 309 SUPERFAMILY SSF56672 172 301 1.27E-9 T 15-10-2018 AM378_24035 3b4cbf8ae988e2995c37bcc31ab51b98 247 Gene3D G3DSA:1.10.10.60 142 246 1.0E-17 T 15-10-2018 AM378_24035 3b4cbf8ae988e2995c37bcc31ab51b98 247 SUPERFAMILY SSF51182 15 174 2.49E-15 T 15-10-2018 IPR011051 RmlC-like cupin domain superfamily AM378_24035 3b4cbf8ae988e2995c37bcc31ab51b98 247 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 195 236 - T 15-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AM378_24035 3b4cbf8ae988e2995c37bcc31ab51b98 247 Pfam PF12833 Helix-turn-helix domain 165 240 3.9E-18 T 15-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM378_24035 3b4cbf8ae988e2995c37bcc31ab51b98 247 Gene3D G3DSA:2.60.120.10 2 78 9.0E-8 T 15-10-2018 IPR014710 RmlC-like jelly roll fold AM378_24035 3b4cbf8ae988e2995c37bcc31ab51b98 247 SMART SM00342 161 240 9.0E-20 T 15-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM378_24035 3b4cbf8ae988e2995c37bcc31ab51b98 247 Pfam PF02311 AraC-like ligand binding domain 10 72 7.7E-6 T 15-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 AM378_24035 3b4cbf8ae988e2995c37bcc31ab51b98 247 SUPERFAMILY SSF46689 198 240 1.97E-6 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AM378_22205 16bb052a950082403e4e82e493888603 258 Gene3D G3DSA:3.40.50.720 1 258 6.0E-71 T 15-10-2018 AM378_22205 16bb052a950082403e4e82e493888603 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 9.4E-35 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_22205 16bb052a950082403e4e82e493888603 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 9.4E-35 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_22205 16bb052a950082403e4e82e493888603 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 9.4E-35 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_22205 16bb052a950082403e4e82e493888603 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 9.4E-35 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_22205 16bb052a950082403e4e82e493888603 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 9.4E-35 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_22205 16bb052a950082403e4e82e493888603 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 214 234 9.4E-35 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_22205 16bb052a950082403e4e82e493888603 258 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 140 168 - T 15-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AM378_22205 16bb052a950082403e4e82e493888603 258 SUPERFAMILY SSF51735 6 251 8.59E-64 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily AM378_22205 16bb052a950082403e4e82e493888603 258 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 17 250 2.3E-48 T 15-10-2018 AM378_22205 16bb052a950082403e4e82e493888603 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 4.2E-10 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_22205 16bb052a950082403e4e82e493888603 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 4.2E-10 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_22205 16bb052a950082403e4e82e493888603 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 4.2E-10 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_07785 15a1bfa3535aa995330c4fa3c9c5fd60 321 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 92 311 6.6E-43 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AM378_07785 15a1bfa3535aa995330c4fa3c9c5fd60 321 SUPERFAMILY SSF161098 69 300 8.5E-24 T 15-10-2018 IPR035906 MetI-like superfamily AM378_13455 0c5c87c8a0d502fa0f954f7fb70c4992 474 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 245 252 - T 15-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 AM378_13455 0c5c87c8a0d502fa0f954f7fb70c4992 474 Pfam PF00171 Aldehyde dehydrogenase family 14 470 2.3E-163 T 15-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 AM378_13455 0c5c87c8a0d502fa0f954f7fb70c4992 474 Gene3D G3DSA:3.40.605.10 20 464 1.3E-180 T 15-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 AM378_13455 0c5c87c8a0d502fa0f954f7fb70c4992 474 SUPERFAMILY SSF53720 3 472 2.23E-158 T 15-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 AM378_13455 0c5c87c8a0d502fa0f954f7fb70c4992 474 TIGRFAM TIGR03374 ABALDH: 1-pyrroline dehydrogenase 2 473 9.8E-288 T 15-10-2018 IPR017749 1-pyrroline dehydrogenase GO:0009447|GO:0019145|GO:0051287|GO:0055114 KEGG: 00330+1.2.1.19|KEGG: 00410+1.2.1.19|MetaCyc: PWY-2|MetaCyc: PWY-3 AM378_13455 0c5c87c8a0d502fa0f954f7fb70c4992 474 Gene3D G3DSA:3.40.309.10 249 439 1.3E-180 T 15-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 AM378_13455 0c5c87c8a0d502fa0f954f7fb70c4992 474 Hamap MF_01275 Gamma-aminobutyraldehyde dehydrogenase [prr]. 1 474 74.168 T 15-10-2018 IPR017749 1-pyrroline dehydrogenase GO:0009447|GO:0019145|GO:0051287|GO:0055114 KEGG: 00330+1.2.1.19|KEGG: 00410+1.2.1.19|MetaCyc: PWY-2|MetaCyc: PWY-3 AM378_23210 ec5295496d376e3bfdb22dae26a29b3d 461 Gene3D G3DSA:3.20.20.80 3 459 1.3E-146 T 15-10-2018 AM378_23210 ec5295496d376e3bfdb22dae26a29b3d 461 ProSitePatterns PS00572 Glycosyl hydrolases family 1 active site. 360 368 - T 15-10-2018 IPR018120 Glycoside hydrolase family 1, active site AM378_23210 ec5295496d376e3bfdb22dae26a29b3d 461 PRINTS PR00131 Glycosyl hydrolase family 1 signature 384 395 1.0E-14 T 15-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 AM378_23210 ec5295496d376e3bfdb22dae26a29b3d 461 PRINTS PR00131 Glycosyl hydrolase family 1 signature 360 368 1.0E-14 T 15-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 AM378_23210 ec5295496d376e3bfdb22dae26a29b3d 461 PRINTS PR00131 Glycosyl hydrolase family 1 signature 429 441 1.0E-14 T 15-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 AM378_23210 ec5295496d376e3bfdb22dae26a29b3d 461 PRINTS PR00131 Glycosyl hydrolase family 1 signature 288 302 1.0E-14 T 15-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 AM378_23210 ec5295496d376e3bfdb22dae26a29b3d 461 PRINTS PR00131 Glycosyl hydrolase family 1 signature 405 422 1.0E-14 T 15-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 AM378_23210 ec5295496d376e3bfdb22dae26a29b3d 461 SUPERFAMILY SSF51445 2 461 3.44E-156 T 15-10-2018 IPR017853 Glycoside hydrolase superfamily AM378_23210 ec5295496d376e3bfdb22dae26a29b3d 461 Pfam PF00232 Glycosyl hydrolase family 1 3 459 1.9E-129 T 15-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 AM378_17595 ad14c67325ca8e9687bada6c8165bded 279 Gene3D G3DSA:1.10.287.460 32 150 6.5E-30 T 15-10-2018 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily GO:0006457 AM378_17595 ad14c67325ca8e9687bada6c8165bded 279 SUPERFAMILY SSF54534 50 257 1.71E-63 T 15-10-2018 AM378_17595 ad14c67325ca8e9687bada6c8165bded 279 Gene3D G3DSA:3.10.50.40 151 267 6.9E-42 T 15-10-2018 AM378_17595 ad14c67325ca8e9687bada6c8165bded 279 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 40 160 5.5E-36 T 15-10-2018 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 AM378_17595 ad14c67325ca8e9687bada6c8165bded 279 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 168 254 3.8E-28 T 15-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain AM378_07265 bbb5337eb2efcc898f94c0409c077fbc 461 Gene3D G3DSA:1.20.1250.20 12 440 2.1E-83 T 15-10-2018 AM378_07265 bbb5337eb2efcc898f94c0409c077fbc 461 Pfam PF00083 Sugar (and other) transporter 51 437 1.6E-54 T 15-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 AM378_07265 bbb5337eb2efcc898f94c0409c077fbc 461 ProSitePatterns PS00217 Sugar transport proteins signature 2. 115 140 - T 15-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AM378_07265 bbb5337eb2efcc898f94c0409c077fbc 461 SUPERFAMILY SSF103473 8 438 1.96E-73 T 15-10-2018 IPR036259 MFS transporter superfamily AM378_06015 fedd9fa1a6a04c13ac035221e46119cb 297 Gene3D G3DSA:1.10.10.60 59 123 4.5E-20 T 15-10-2018 AM378_06015 fedd9fa1a6a04c13ac035221e46119cb 297 Gene3D G3DSA:3.20.80.10 130 296 5.3E-15 T 15-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily AM378_06015 fedd9fa1a6a04c13ac035221e46119cb 297 SUPERFAMILY SSF46689 61 110 4.35E-12 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AM378_06015 fedd9fa1a6a04c13ac035221e46119cb 297 Pfam PF06445 GyrI-like small molecule binding domain 133 278 1.1E-9 T 15-10-2018 IPR029442 GyrI-like small molecule binding domain AM378_06015 fedd9fa1a6a04c13ac035221e46119cb 297 SMART SM00342 23 106 3.7E-28 T 15-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM378_06015 fedd9fa1a6a04c13ac035221e46119cb 297 Pfam PF12833 Helix-turn-helix domain 30 107 1.8E-20 T 15-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM378_06015 fedd9fa1a6a04c13ac035221e46119cb 297 SUPERFAMILY SSF46689 8 57 1.97E-8 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AM378_06015 fedd9fa1a6a04c13ac035221e46119cb 297 SUPERFAMILY SSF55136 131 272 1.65E-11 T 15-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily AM378_06015 fedd9fa1a6a04c13ac035221e46119cb 297 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 75 90 2.2E-7 T 15-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM378_06015 fedd9fa1a6a04c13ac035221e46119cb 297 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 90 106 2.2E-7 T 15-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM378_06015 fedd9fa1a6a04c13ac035221e46119cb 297 Gene3D G3DSA:1.10.10.60 7 57 1.6E-20 T 15-10-2018 AM378_23075 1c8826e76e5ce2b4aa1e3ef6c0ad7378 244 PIRSF PIRSF000857 7 244 7.2E-56 T 15-10-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 AM378_23075 1c8826e76e5ce2b4aa1e3ef6c0ad7378 244 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 48 219 1.9E-49 T 15-10-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824 Reactome: R-HSA-196843 AM378_23075 1c8826e76e5ce2b4aa1e3ef6c0ad7378 244 TIGRFAM TIGR00434 cysH: phosophoadenylyl-sulfate reductase 33 243 1.4E-90 T 15-10-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 AM378_23075 1c8826e76e5ce2b4aa1e3ef6c0ad7378 244 Hamap MF_00063 Phosphoadenosine phosphosulfate reductase [cysH]. 9 243 39.788 T 15-10-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 AM378_23075 1c8826e76e5ce2b4aa1e3ef6c0ad7378 244 Gene3D G3DSA:3.40.50.620 2 216 8.6E-63 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM378_23075 1c8826e76e5ce2b4aa1e3ef6c0ad7378 244 TIGRFAM TIGR02057 PAPS_reductase: phosphoadenosine phosphosulfate reductase 21 242 4.7E-96 T 15-10-2018 IPR011800 Phosphoadenosine phosphosulphate reductase CysH GO:0004604|GO:0019379 KEGG: 00920+1.8.4.8 AM378_23075 1c8826e76e5ce2b4aa1e3ef6c0ad7378 244 SUPERFAMILY SSF52402 21 208 4.95E-53 T 15-10-2018 AM378_17230 05dec5f07e998914a155e70b74019a8e 261 SUPERFAMILY SSF161098 6 258 4.06E-43 T 15-10-2018 IPR035906 MetI-like superfamily AM378_17230 05dec5f07e998914a155e70b74019a8e 261 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 87 258 1.0E-13 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AM378_17230 05dec5f07e998914a155e70b74019a8e 261 Gene3D G3DSA:1.10.3720.10 2 254 2.9E-38 T 15-10-2018 IPR035906 MetI-like superfamily AM378_07605 5320e20621526efa8ac13a4703c9ee3a 1295 TIGRFAM TIGR01967 DEAH_box_HrpA: RNA helicase HrpA 11 1292 0.0 T 15-10-2018 IPR010222 RNA helicase HrpA GO:0004004 AM378_07605 5320e20621526efa8ac13a4703c9ee3a 1295 SUPERFAMILY SSF52540 70 596 9.0E-108 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_07605 5320e20621526efa8ac13a4703c9ee3a 1295 Gene3D G3DSA:1.20.120.1080 445 547 1.1E-16 T 15-10-2018 AM378_07605 5320e20621526efa8ac13a4703c9ee3a 1295 SMART SM00382 88 380 3.6E-6 T 15-10-2018 IPR003593 AAA+ ATPase domain AM378_07605 5320e20621526efa8ac13a4703c9ee3a 1295 Pfam PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold 617 693 2.5E-18 T 15-10-2018 IPR011709 Domain of unknown function DUF1605 AM378_07605 5320e20621526efa8ac13a4703c9ee3a 1295 SMART SM00847 460 554 7.9E-34 T 15-10-2018 IPR007502 Helicase-associated domain GO:0004386 AM378_07605 5320e20621526efa8ac13a4703c9ee3a 1295 Gene3D G3DSA:3.40.50.300 24 248 4.3E-76 T 15-10-2018 AM378_07605 5320e20621526efa8ac13a4703c9ee3a 1295 SMART SM00487 71 255 3.0E-27 T 15-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AM378_07605 5320e20621526efa8ac13a4703c9ee3a 1295 Gene3D G3DSA:3.40.50.300 249 416 1.1E-55 T 15-10-2018 AM378_07605 5320e20621526efa8ac13a4703c9ee3a 1295 Pfam PF00270 DEAD/DEAH box helicase 82 229 7.5E-6 T 15-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AM378_07605 5320e20621526efa8ac13a4703c9ee3a 1295 Pfam PF11898 Domain of unknown function (DUF3418) 708 1291 1.4E-240 T 15-10-2018 IPR024590 RNA helicase HrpA, C-terminal AM378_07605 5320e20621526efa8ac13a4703c9ee3a 1295 Pfam PF04408 Helicase associated domain (HA2) 462 552 6.3E-16 T 15-10-2018 IPR007502 Helicase-associated domain GO:0004386 AM378_07605 5320e20621526efa8ac13a4703c9ee3a 1295 Pfam PF00271 Helicase conserved C-terminal domain 282 399 8.9E-11 T 15-10-2018 IPR001650 Helicase, C-terminal AM378_07605 5320e20621526efa8ac13a4703c9ee3a 1295 SMART SM00490 300 400 3.7E-15 T 15-10-2018 IPR001650 Helicase, C-terminal AM378_17940 f70a93cd4e968bdaca10bbce97461344 79 Pfam PF09012 FeoC like transcriptional regulator 4 75 3.1E-19 T 15-10-2018 IPR015102 Transcriptional regulator HTH-type, FeoC AM378_17940 f70a93cd4e968bdaca10bbce97461344 79 Hamap MF_01586 Probable [Fe-S]-dependent transcriptional repressor [feoC]. 1 78 25.763 T 15-10-2018 IPR023732 Probable [Fe-S]-dependent transcriptional repressor AM378_17940 f70a93cd4e968bdaca10bbce97461344 79 SUPERFAMILY SSF46785 1 74 1.3E-21 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM378_17940 f70a93cd4e968bdaca10bbce97461344 79 Gene3D G3DSA:1.10.10.10 1 78 3.5E-35 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_19830 2e8be0fadcb4ac95512bb36dedf71b85 141 TIGRFAM TIGR03561 organ_hyd_perox: peroxiredoxin, Ohr subfamily 7 140 1.5E-55 T 15-10-2018 IPR019953 Organic hydroperoxide resistance protein famiy GO:0006979 AM378_19830 2e8be0fadcb4ac95512bb36dedf71b85 141 Pfam PF02566 OsmC-like protein 44 138 6.3E-16 T 15-10-2018 IPR003718 OsmC/Ohr family AM378_19830 2e8be0fadcb4ac95512bb36dedf71b85 141 Gene3D G3DSA:3.30.300.20 48 141 5.2E-33 T 15-10-2018 IPR015946 K homology domain-like, alpha/beta AM378_19830 2e8be0fadcb4ac95512bb36dedf71b85 141 SUPERFAMILY SSF82784 1 140 3.14E-43 T 15-10-2018 IPR036102 OsmC/Ohr superfamily AM378_19830 2e8be0fadcb4ac95512bb36dedf71b85 141 Gene3D G3DSA:2.20.25.10 1 47 1.3E-23 T 15-10-2018 AM378_05930 42bbefa4f4b3feacad50b3256a8e5e7f 294 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 3 285 47.025 T 15-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AM378_05930 42bbefa4f4b3feacad50b3256a8e5e7f 294 PRINTS PR00146 Dihydrodipicolinate synthase signature 103 119 2.5E-19 T 15-10-2018 IPR002220 DapA-like GO:0016829 AM378_05930 42bbefa4f4b3feacad50b3256a8e5e7f 294 PRINTS PR00146 Dihydrodipicolinate synthase signature 128 145 2.5E-19 T 15-10-2018 IPR002220 DapA-like GO:0016829 AM378_05930 42bbefa4f4b3feacad50b3256a8e5e7f 294 PRINTS PR00146 Dihydrodipicolinate synthase signature 71 89 2.5E-19 T 15-10-2018 IPR002220 DapA-like GO:0016829 AM378_05930 42bbefa4f4b3feacad50b3256a8e5e7f 294 PRINTS PR00146 Dihydrodipicolinate synthase signature 36 57 2.5E-19 T 15-10-2018 IPR002220 DapA-like GO:0016829 AM378_05930 42bbefa4f4b3feacad50b3256a8e5e7f 294 SMART SM01130 3 287 1.3E-101 T 15-10-2018 IPR002220 DapA-like GO:0016829 AM378_05930 42bbefa4f4b3feacad50b3256a8e5e7f 294 ProSitePatterns PS00665 Dihydrodipicolinate synthase signature 1. 39 56 - T 15-10-2018 IPR020624 Schiff base-forming aldolase, conserved site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AM378_05930 42bbefa4f4b3feacad50b3256a8e5e7f 294 Pfam PF00701 Dihydrodipicolinate synthetase family 4 285 3.5E-65 T 15-10-2018 IPR002220 DapA-like GO:0016829 AM378_05930 42bbefa4f4b3feacad50b3256a8e5e7f 294 PIRSF PIRSF001365 1 292 4.2E-78 T 15-10-2018 IPR002220 DapA-like GO:0016829 AM378_05930 42bbefa4f4b3feacad50b3256a8e5e7f 294 Gene3D G3DSA:3.20.20.70 4 287 4.0E-85 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM378_05930 42bbefa4f4b3feacad50b3256a8e5e7f 294 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 133 163 - T 15-10-2018 IPR020625 Schiff base-forming aldolase, active site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|Reactome: R-HSA-389661 AM378_05930 42bbefa4f4b3feacad50b3256a8e5e7f 294 SUPERFAMILY SSF51569 2 286 1.78E-82 T 15-10-2018 AM378_05930 42bbefa4f4b3feacad50b3256a8e5e7f 294 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 7 285 4.6E-78 T 15-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AM378_04095 620496a511131bd852b0a152fac91f00 500 ProSitePatterns PS00216 Sugar transport proteins signature 1. 316 333 - T 15-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AM378_04095 620496a511131bd852b0a152fac91f00 500 SUPERFAMILY SSF103473 25 446 2.62E-72 T 15-10-2018 IPR036259 MFS transporter superfamily AM378_04095 620496a511131bd852b0a152fac91f00 500 Pfam PF08946 Osmosensory transporter coiled coil 455 500 1.6E-22 T 15-10-2018 IPR015041 Osmosensory transporter coiled coil AM378_04095 620496a511131bd852b0a152fac91f00 500 TIGRFAM TIGR00883 2A0106: MFS transporter, metabolite:H+ symporter (MHS) family protein 34 433 1.0E-141 T 15-10-2018 IPR004736 MFS transporter, metabolite:H symporter GO:0016021|GO:0022857|GO:0055085 AM378_04095 620496a511131bd852b0a152fac91f00 500 Gene3D G3DSA:1.20.1250.20 25 459 1.3E-74 T 15-10-2018 AM378_04095 620496a511131bd852b0a152fac91f00 500 SUPERFAMILY SSF103661 466 498 5.49E-11 T 15-10-2018 IPR036292 Proline/betaine transporter ProP, C-terminal AM378_04095 620496a511131bd852b0a152fac91f00 500 Pfam PF00083 Sugar (and other) transporter 29 448 7.7E-66 T 15-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 AM378_15565 413ce027fb35c99d31110e58d3c8fea9 316 Gene3D G3DSA:3.30.1490.20 137 201 1.5E-120 T 15-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 AM378_15565 413ce027fb35c99d31110e58d3c8fea9 316 TIGRFAM TIGR01380 glut_syn: glutathione synthase 2 312 3.7E-140 T 15-10-2018 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 AM378_15565 413ce027fb35c99d31110e58d3c8fea9 316 Pfam PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain 124 296 6.5E-80 T 15-10-2018 IPR004218 Prokaryotic glutathione synthetase, ATP-binding GO:0004363|GO:0005524|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 AM378_15565 413ce027fb35c99d31110e58d3c8fea9 316 Gene3D G3DSA:3.30.470.20 115 295 1.5E-120 T 15-10-2018 AM378_15565 413ce027fb35c99d31110e58d3c8fea9 316 Pfam PF02951 Prokaryotic glutathione synthetase, N-terminal domain 2 120 7.9E-48 T 15-10-2018 IPR004215 Prokaryotic glutathione synthetase, N-terminal GO:0004363|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 AM378_15565 413ce027fb35c99d31110e58d3c8fea9 316 Hamap MF_00162 Glutathione synthetase [gshB]. 1 316 183.412 T 15-10-2018 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 AM378_15565 413ce027fb35c99d31110e58d3c8fea9 316 Gene3D G3DSA:3.40.50.20 7 114 1.5E-120 T 15-10-2018 AM378_15565 413ce027fb35c99d31110e58d3c8fea9 316 SUPERFAMILY SSF56059 123 312 1.72E-59 T 15-10-2018 AM378_15565 413ce027fb35c99d31110e58d3c8fea9 316 SUPERFAMILY SSF52440 2 122 6.91E-46 T 15-10-2018 IPR016185 Pre-ATP-grasp domain superfamily AM378_12135 c85a5f2a3e7746106179c7c07ccf8421 310 Hamap MF_02125 50S ribosomal protein L3 glutamine methyltransferase [prmB]. 6 300 53.336 T 15-10-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 AM378_12135 c85a5f2a3e7746106179c7c07ccf8421 310 Gene3D G3DSA:3.40.50.150 103 276 1.3E-43 T 15-10-2018 AM378_12135 c85a5f2a3e7746106179c7c07ccf8421 310 SUPERFAMILY SSF53335 15 294 1.26E-50 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM378_12135 c85a5f2a3e7746106179c7c07ccf8421 310 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 204 210 - T 15-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 AM378_12135 c85a5f2a3e7746106179c7c07ccf8421 310 Pfam PF05175 Methyltransferase small domain 132 215 2.6E-15 T 15-10-2018 IPR007848 Methyltransferase small domain GO:0008168 AM378_12135 c85a5f2a3e7746106179c7c07ccf8421 310 TIGRFAM TIGR03533 L3_gln_methyl: protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific 13 295 2.3E-136 T 15-10-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 AM378_12135 c85a5f2a3e7746106179c7c07ccf8421 310 Gene3D G3DSA:1.10.8.10 15 102 2.4E-6 T 15-10-2018 AM378_12135 c85a5f2a3e7746106179c7c07ccf8421 310 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 15 304 8.3E-102 T 15-10-2018 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 AM378_12135 c85a5f2a3e7746106179c7c07ccf8421 310 PIRSF PIRSF037167 2 307 4.2E-148 T 15-10-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 AM378_07375 638fb7c20e815628f4cc2301a357a534 301 Gene3D G3DSA:3.40.190.10 166 271 1.5E-56 T 15-10-2018 AM378_07375 638fb7c20e815628f4cc2301a357a534 301 SUPERFAMILY SSF46785 1 112 1.22E-19 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM378_07375 638fb7c20e815628f4cc2301a357a534 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 1.2E-7 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_07375 638fb7c20e815628f4cc2301a357a534 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 1.2E-7 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_07375 638fb7c20e815628f4cc2301a357a534 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 1.2E-7 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_07375 638fb7c20e815628f4cc2301a357a534 301 Gene3D G3DSA:3.40.190.10 89 289 1.5E-56 T 15-10-2018 AM378_07375 638fb7c20e815628f4cc2301a357a534 301 SUPERFAMILY SSF53850 89 289 1.5E-36 T 15-10-2018 AM378_07375 638fb7c20e815628f4cc2301a357a534 301 Gene3D G3DSA:1.10.10.10 1 84 4.0E-24 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_07375 638fb7c20e815628f4cc2301a357a534 301 Pfam PF03466 LysR substrate binding domain 88 290 3.3E-40 T 15-10-2018 IPR005119 LysR, substrate-binding AM378_07375 638fb7c20e815628f4cc2301a357a534 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 6.7E-20 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_22560 ea31e6fc84287868042bada5ca63f748 317 Gene3D G3DSA:3.40.1010.20 6 283 5.7E-112 T 15-10-2018 AM378_22560 ea31e6fc84287868042bada5ca63f748 317 Hamap MF_00191 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [ispH]. 1 287 37.089 T 15-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 AM378_22560 ea31e6fc84287868042bada5ca63f748 317 TIGRFAM TIGR00216 ispH_lytB: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 2 285 6.9E-99 T 15-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 AM378_22560 ea31e6fc84287868042bada5ca63f748 317 Pfam PF02401 LytB protein 3 283 2.2E-92 T 15-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 AM378_22560 ea31e6fc84287868042bada5ca63f748 317 Gene3D G3DSA:3.40.50.11270 12 97 5.7E-112 T 15-10-2018 AM378_22560 ea31e6fc84287868042bada5ca63f748 317 Gene3D G3DSA:3.40.1010.20 98 197 5.7E-112 T 15-10-2018 AM378_03340 b83e7e4d97cfb647b1f9c709e5a1b1ca 549 Hamap MF_00069 Hydroxylamine reductase [hcp]. 1 549 20.677 T 15-10-2018 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 AM378_03340 b83e7e4d97cfb647b1f9c709e5a1b1ca 549 Gene3D G3DSA:1.20.1270.20 1 144 3.1E-36 T 15-10-2018 IPR016100 Prismane, alpha-bundle GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 AM378_03340 b83e7e4d97cfb647b1f9c709e5a1b1ca 549 PIRSF PIRSF000076 1 549 6.5E-236 T 15-10-2018 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 AM378_03340 b83e7e4d97cfb647b1f9c709e5a1b1ca 549 SUPERFAMILY SSF56821 1 548 1.68E-186 T 15-10-2018 IPR011254 Prismane-like superfamily GO:0003824|GO:0016491|GO:0055114 AM378_03340 b83e7e4d97cfb647b1f9c709e5a1b1ca 549 Pfam PF03063 Prismane/CO dehydrogenase family 1 544 2.8E-155 T 15-10-2018 IPR004137 Hydroxylamine reductase/Ni-containing CO dehydrogenase GO:0016491|GO:0055114 KEGG: 00910+1.7.99.1 AM378_03340 b83e7e4d97cfb647b1f9c709e5a1b1ca 549 TIGRFAM TIGR01703 hybrid_clust: hydroxylamine reductase 1 548 2.0E-237 T 15-10-2018 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 AM378_03340 b83e7e4d97cfb647b1f9c709e5a1b1ca 549 Gene3D G3DSA:1.20.1270.20 149 232 2.8E-26 T 15-10-2018 IPR016100 Prismane, alpha-bundle GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 AM378_03340 b83e7e4d97cfb647b1f9c709e5a1b1ca 549 Gene3D G3DSA:3.40.50.2030 380 548 7.2E-59 T 15-10-2018 IPR016099 Prismane-like, alpha/beta-sandwich GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 AM378_03340 b83e7e4d97cfb647b1f9c709e5a1b1ca 549 Gene3D G3DSA:3.40.50.2030 234 379 3.6E-59 T 15-10-2018 IPR016099 Prismane-like, alpha/beta-sandwich GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 AM378_11835 ffda02dc3a5effa97a3f638c368d889f 151 Hamap MF_01101 UPF0208 membrane protein YfbV [yfbV]. 9 151 36.642 T 15-10-2018 IPR007334 Uncharacterised protein family UPF0208 AM378_11835 ffda02dc3a5effa97a3f638c368d889f 151 Pfam PF04217 Protein of unknown function, DUF412 11 149 5.2E-61 T 15-10-2018 IPR007334 Uncharacterised protein family UPF0208 AM378_15280 e65d60986ae46fc184bd9ae5753cceef 264 SUPERFAMILY SSF46785 11 84 2.39E-16 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM378_15280 e65d60986ae46fc184bd9ae5753cceef 264 Gene3D G3DSA:3.30.450.40 82 259 1.3E-37 T 15-10-2018 IPR029016 GAF-like domain superfamily AM378_15280 e65d60986ae46fc184bd9ae5753cceef 264 Pfam PF09339 IclR helix-turn-helix domain 14 64 1.6E-17 T 15-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 AM378_15280 e65d60986ae46fc184bd9ae5753cceef 264 SUPERFAMILY SSF55781 77 256 3.01E-39 T 15-10-2018 AM378_15280 e65d60986ae46fc184bd9ae5753cceef 264 Gene3D G3DSA:1.10.10.10 5 79 4.2E-20 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_15280 e65d60986ae46fc184bd9ae5753cceef 264 SMART SM00346 11 101 8.7E-30 T 15-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 AM378_15280 e65d60986ae46fc184bd9ae5753cceef 264 Pfam PF01614 Bacterial transcriptional regulator 132 252 4.6E-20 T 15-10-2018 IPR014757 Transcription regulator IclR, C-terminal AM378_01245 943dfedbf99466c585ec5abbf2ff1c5f 340 SUPERFAMILY SSF53807 50 324 5.89E-37 T 15-10-2018 AM378_01245 943dfedbf99466c585ec5abbf2ff1c5f 340 Pfam PF01497 Periplasmic binding protein 61 304 3.5E-19 T 15-10-2018 IPR002491 ABC transporter periplasmic binding domain AM378_01245 943dfedbf99466c585ec5abbf2ff1c5f 340 Gene3D G3DSA:3.40.50.1980 152 330 8.8E-49 T 15-10-2018 AM378_01245 943dfedbf99466c585ec5abbf2ff1c5f 340 Gene3D G3DSA:3.40.50.1980 30 149 9.7E-16 T 15-10-2018 AM378_18530 ca3d455f26fd4ac935ab7596b5eae68e 85 Gene3D G3DSA:3.30.70.260 1 85 6.0E-7 T 15-10-2018 AM378_18530 ca3d455f26fd4ac935ab7596b5eae68e 85 SUPERFAMILY SSF55021 3 75 4.51E-11 T 15-10-2018 AM378_18530 ca3d455f26fd4ac935ab7596b5eae68e 85 Pfam PF13710 ACT domain 13 73 4.7E-25 T 15-10-2018 AM378_18940 edc55ecfd7dda3b683e5135394659d81 337 Gene3D G3DSA:3.40.50.2000 1 155 2.3E-23 T 15-10-2018 AM378_18940 edc55ecfd7dda3b683e5135394659d81 337 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 82 325 1.8E-23 T 15-10-2018 IPR002201 Glycosyl transferase, family 9 GO:0016757 AM378_18940 edc55ecfd7dda3b683e5135394659d81 337 SUPERFAMILY SSF53756 2 335 7.85E-63 T 15-10-2018 AM378_18940 edc55ecfd7dda3b683e5135394659d81 337 Gene3D G3DSA:3.40.50.2000 164 337 1.7E-32 T 15-10-2018 AM378_14025 166cd80c60d5720e54923e2ae80d32cc 368 Gene3D G3DSA:1.10.3720.10 152 341 2.3E-38 T 15-10-2018 IPR035906 MetI-like superfamily AM378_14025 166cd80c60d5720e54923e2ae80d32cc 368 SUPERFAMILY SSF161098 154 336 6.93E-44 T 15-10-2018 IPR035906 MetI-like superfamily AM378_14025 166cd80c60d5720e54923e2ae80d32cc 368 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 175 340 3.8E-27 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AM378_16050 80be92e415ac46c889a1e2db443f8693 274 Hamap MF_01006 Undecaprenyl-diphosphatase [uppP]. 5 273 18.493 T 15-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 AM378_16050 80be92e415ac46c889a1e2db443f8693 274 Pfam PF02673 Bacitracin resistance protein BacA 10 268 1.6E-86 T 15-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 AM378_16050 80be92e415ac46c889a1e2db443f8693 274 TIGRFAM TIGR00753 undec_PP_bacA: undecaprenyl-diphosphatase UppP 10 266 1.3E-100 T 15-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 AM378_07810 b2906e6d8bb29f10e9caf93727a5efda 394 Gene3D G3DSA:1.20.1290.10 241 390 7.8E-22 T 15-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 AM378_07810 b2906e6d8bb29f10e9caf93727a5efda 394 SUPERFAMILY SSF69118 215 385 9.52E-26 T 15-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 AM378_07810 b2906e6d8bb29f10e9caf93727a5efda 394 SUPERFAMILY SSF69118 79 184 4.17E-11 T 15-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 AM378_07810 b2906e6d8bb29f10e9caf93727a5efda 394 Gene3D G3DSA:1.20.1290.10 83 189 6.5E-5 T 15-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 AM378_07810 b2906e6d8bb29f10e9caf93727a5efda 394 Pfam PF02627 Carboxymuconolactone decarboxylase family 265 311 4.8E-5 T 15-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 AM378_11000 79d1cd076972b22945df77401a3c8541 238 Pfam PF00005 ABC transporter 21 165 9.1E-31 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM378_11000 79d1cd076972b22945df77401a3c8541 238 SMART SM00382 30 216 3.7E-7 T 15-10-2018 IPR003593 AAA+ ATPase domain AM378_11000 79d1cd076972b22945df77401a3c8541 238 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM378_11000 79d1cd076972b22945df77401a3c8541 238 Gene3D G3DSA:3.40.50.300 1 238 2.0E-63 T 15-10-2018 AM378_11000 79d1cd076972b22945df77401a3c8541 238 SUPERFAMILY SSF52540 4 235 7.14E-62 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_12585 7d18068a2fa862b3a34c1453831ba77c 322 SUPERFAMILY SSF53686 3 316 2.88E-99 T 15-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme AM378_12585 7d18068a2fa862b3a34c1453831ba77c 322 Gene3D G3DSA:3.40.50.1100 12 306 1.3E-126 T 15-10-2018 AM378_12585 7d18068a2fa862b3a34c1453831ba77c 322 TIGRFAM TIGR01136 cysKM: cysteine synthase 10 311 2.4E-137 T 15-10-2018 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 AM378_12585 7d18068a2fa862b3a34c1453831ba77c 322 Gene3D G3DSA:3.40.50.1100 43 145 1.3E-126 T 15-10-2018 AM378_12585 7d18068a2fa862b3a34c1453831ba77c 322 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 10 299 2.0E-70 T 15-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme AM378_12585 7d18068a2fa862b3a34c1453831ba77c 322 TIGRFAM TIGR01139 cysK: cysteine synthase A 9 311 2.1E-145 T 15-10-2018 IPR005859 Cysteine synthase CysK GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 AM378_12585 7d18068a2fa862b3a34c1453831ba77c 322 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 31 49 - T 15-10-2018 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 AM378_08150 06d9d287687b49269d1fd8f82d7dd9fe 142 SUPERFAMILY SSF54637 7 131 3.2E-39 T 15-10-2018 IPR029069 HotDog domain superfamily AM378_08150 06d9d287687b49269d1fd8f82d7dd9fe 142 Gene3D G3DSA:3.10.129.10 1 138 2.8E-44 T 15-10-2018 AM378_08150 06d9d287687b49269d1fd8f82d7dd9fe 142 Pfam PF03061 Thioesterase superfamily 26 98 8.5E-19 T 15-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 AM378_22890 9134605a82758f9e529abc1bc2e29d7a 134 Pfam PF00293 NUDIX domain 4 122 1.0E-21 T 15-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 AM378_22890 9134605a82758f9e529abc1bc2e29d7a 134 PRINTS PR01401 Mutator MutT protein signature 77 90 2.1E-10 T 15-10-2018 IPR003561 Mutator MutT GO:0006281|GO:0008413 MetaCyc: PWY-6502 AM378_22890 9134605a82758f9e529abc1bc2e29d7a 134 PRINTS PR01401 Mutator MutT protein signature 2 23 2.1E-10 T 15-10-2018 IPR003561 Mutator MutT GO:0006281|GO:0008413 MetaCyc: PWY-6502 AM378_22890 9134605a82758f9e529abc1bc2e29d7a 134 PRINTS PR00502 NUDIX hydrolase family signature 47 62 1.2E-10 T 15-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 AM378_22890 9134605a82758f9e529abc1bc2e29d7a 134 PRINTS PR00502 NUDIX hydrolase family signature 33 47 1.2E-10 T 15-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 AM378_22890 9134605a82758f9e529abc1bc2e29d7a 134 Gene3D G3DSA:3.90.79.10 1 127 7.3E-38 T 15-10-2018 AM378_22890 9134605a82758f9e529abc1bc2e29d7a 134 SUPERFAMILY SSF55811 1 126 1.62E-38 T 15-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 AM378_22890 9134605a82758f9e529abc1bc2e29d7a 134 ProSitePatterns PS00893 Nudix box signature. 38 59 - T 15-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 AM378_22890 9134605a82758f9e529abc1bc2e29d7a 134 TIGRFAM TIGR00586 mutt: mutator mutT protein 1 126 2.3E-51 T 15-10-2018 IPR003561 Mutator MutT GO:0006281|GO:0008413 MetaCyc: PWY-6502 AM378_07460 7490dc1c170bbb0aa5c1b480865312f8 278 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 32 260 2.2E-58 T 15-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 AM378_07460 7490dc1c170bbb0aa5c1b480865312f8 278 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 144 157 2.9E-13 T 15-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 AM378_07460 7490dc1c170bbb0aa5c1b480865312f8 278 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 117 134 2.9E-13 T 15-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 AM378_07460 7490dc1c170bbb0aa5c1b480865312f8 278 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 67 78 2.9E-13 T 15-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 AM378_07460 7490dc1c170bbb0aa5c1b480865312f8 278 SUPERFAMILY SSF56601 14 272 1.24E-55 T 15-10-2018 IPR012338 Beta-lactamase/transpeptidase-like AM378_07460 7490dc1c170bbb0aa5c1b480865312f8 278 Gene3D G3DSA:3.40.710.10 18 278 2.7E-61 T 15-10-2018 AM378_22020 78f8cecbde68989adf3ec668beb2bbf7 500 SUPERFAMILY SSF53720 2 484 3.8E-145 T 15-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 AM378_22020 78f8cecbde68989adf3ec668beb2bbf7 500 Gene3D G3DSA:3.40.605.10 21 461 7.8E-155 T 15-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 AM378_22020 78f8cecbde68989adf3ec668beb2bbf7 500 TIGRFAM TIGR01722 MMSDH: methylmalonate-semialdehyde dehydrogenase (acylating) 4 484 1.1E-188 T 15-10-2018 IPR010061 Methylmalonate-semialdehyde dehydrogenase GO:0004491|GO:0055114 KEGG: 00280+1.2.1.27|KEGG: 00640+1.2.1.27|MetaCyc: PWY-5642|Reactome: R-HSA-70895 AM378_22020 78f8cecbde68989adf3ec668beb2bbf7 500 Pfam PF00171 Aldehyde dehydrogenase family 17 480 7.3E-138 T 15-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 AM378_22020 78f8cecbde68989adf3ec668beb2bbf7 500 Gene3D G3DSA:3.40.309.10 247 453 7.8E-155 T 15-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 AM378_22345 a47868233a960cdc4bfa6ccaddec6eba 447 SUPERFAMILY SSF46785 7 76 6.94E-8 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM378_22345 a47868233a960cdc4bfa6ccaddec6eba 447 Gene3D G3DSA:1.10.10.10 2 75 1.2E-7 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_22345 a47868233a960cdc4bfa6ccaddec6eba 447 Pfam PF01022 Bacterial regulatory protein, arsR family 8 37 5.3E-5 T 15-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AM378_22345 a47868233a960cdc4bfa6ccaddec6eba 447 Pfam PF07804 HipA-like C-terminal domain 202 435 6.2E-22 T 15-10-2018 IPR012893 HipA-like, C-terminal AM378_05390 e95dea8c9cba0b82d7ae6c290704468d 239 Pfam PF00392 Bacterial regulatory proteins, gntR family 11 73 1.2E-19 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM378_05390 e95dea8c9cba0b82d7ae6c290704468d 239 SMART SM00866 94 233 7.4E-26 T 15-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 AM378_05390 e95dea8c9cba0b82d7ae6c290704468d 239 SUPERFAMILY SSF46785 5 77 9.99E-21 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM378_05390 e95dea8c9cba0b82d7ae6c290704468d 239 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 47 63 4.6E-8 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM378_05390 e95dea8c9cba0b82d7ae6c290704468d 239 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 33 47 4.6E-8 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM378_05390 e95dea8c9cba0b82d7ae6c290704468d 239 Pfam PF07702 UTRA domain 94 232 2.3E-31 T 15-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 AM378_05390 e95dea8c9cba0b82d7ae6c290704468d 239 Gene3D G3DSA:3.40.1410.10 79 237 4.6E-29 T 15-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily AM378_05390 e95dea8c9cba0b82d7ae6c290704468d 239 Gene3D G3DSA:1.10.10.10 8 77 4.3E-23 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_05390 e95dea8c9cba0b82d7ae6c290704468d 239 TIGRFAM TIGR03337 phnR: phosphonate utilization transcriptional regulator PhnR 9 238 1.0E-114 T 15-10-2018 IPR017722 Phosphonate utilization transcriptional regulator PhnR AM378_05390 e95dea8c9cba0b82d7ae6c290704468d 239 SMART SM00345 14 73 1.8E-19 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM378_05390 e95dea8c9cba0b82d7ae6c290704468d 239 SUPERFAMILY SSF64288 61 236 1.46E-36 T 15-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily AM378_14880 1e5ca24ad592b584b1e0ceec39124e89 231 SUPERFAMILY SSF52172 3 130 3.84E-37 T 15-10-2018 IPR011006 CheY-like superfamily AM378_14880 1e5ca24ad592b584b1e0ceec39124e89 231 Pfam PF00072 Response regulator receiver domain 7 114 2.8E-24 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM378_14880 1e5ca24ad592b584b1e0ceec39124e89 231 SMART SM00448 3 114 1.2E-36 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM378_14880 1e5ca24ad592b584b1e0ceec39124e89 231 Gene3D G3DSA:1.10.10.10 130 230 1.5E-26 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_14880 1e5ca24ad592b584b1e0ceec39124e89 231 SUPERFAMILY SSF46894 128 226 4.89E-24 T 15-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AM378_14880 1e5ca24ad592b584b1e0ceec39124e89 231 Pfam PF00486 Transcriptional regulatory protein, C terminal 152 226 1.1E-22 T 15-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AM378_14880 1e5ca24ad592b584b1e0ceec39124e89 231 SMART SM00862 151 227 2.3E-23 T 15-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AM378_14880 1e5ca24ad592b584b1e0ceec39124e89 231 Gene3D G3DSA:3.40.50.2300 1 129 1.9E-33 T 15-10-2018 AM378_12810 a20603de685fa373f84a9bfc50b46a28 224 Pfam PF02557 D-alanyl-D-alanine carboxypeptidase 21 177 1.1E-38 T 15-10-2018 IPR003709 Peptidase M15B GO:0006508|GO:0008233 AM378_12810 a20603de685fa373f84a9bfc50b46a28 224 SUPERFAMILY SSF55166 19 178 3.26E-20 T 15-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 AM378_12810 a20603de685fa373f84a9bfc50b46a28 224 Gene3D G3DSA:3.30.1380.10 2 188 4.7E-33 T 15-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 AM378_12730 1ea0a5d31087920129eca165cb4fbde0 499 ProSitePatterns PS01095 Chitinases family 18 active site. 136 144 - T 15-10-2018 IPR001579 Glycoside hydrolase, chitinase active site GO:0004553|GO:0005975 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 AM378_12730 1ea0a5d31087920129eca165cb4fbde0 499 Pfam PF00704 Glycosyl hydrolases family 18 7 408 6.6E-84 T 15-10-2018 IPR001223 Glycoside hydrolase family 18, catalytic domain GO:0005975 AM378_12730 1ea0a5d31087920129eca165cb4fbde0 499 SUPERFAMILY SSF51445 4 436 1.1E-88 T 15-10-2018 IPR017853 Glycoside hydrolase superfamily AM378_12730 1ea0a5d31087920129eca165cb4fbde0 499 SUPERFAMILY SSF54556 292 379 4.16E-24 T 15-10-2018 IPR029070 Chitinase insertion domain superfamily AM378_12730 1ea0a5d31087920129eca165cb4fbde0 499 Gene3D G3DSA:3.10.50.10 291 380 9.7E-226 T 15-10-2018 IPR029070 Chitinase insertion domain superfamily AM378_12730 1ea0a5d31087920129eca165cb4fbde0 499 Gene3D G3DSA:2.10.10.20 449 499 5.8E-23 T 15-10-2018 AM378_12730 1ea0a5d31087920129eca165cb4fbde0 499 SMART SM00495 453 495 3.3E-8 T 15-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 AM378_12730 1ea0a5d31087920129eca165cb4fbde0 499 Gene3D G3DSA:3.20.20.80 26 426 9.7E-226 T 15-10-2018 AM378_12730 1ea0a5d31087920129eca165cb4fbde0 499 SUPERFAMILY SSF51055 449 497 2.75E-10 T 15-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 AM378_12730 1ea0a5d31087920129eca165cb4fbde0 499 SMART SM00636 16 408 5.1E-106 T 15-10-2018 IPR011583 Chitinase II GO:0008061 AM378_20440 62b0d31279232217b8f625ad6e329f0d 251 ProSitePatterns PS01183 ubiE/COQ5 methyltransferase family signature 1. 36 51 - T 15-10-2018 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 AM378_20440 62b0d31279232217b8f625ad6e329f0d 251 SUPERFAMILY SSF53335 19 248 4.34E-52 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM378_20440 62b0d31279232217b8f625ad6e329f0d 251 Pfam PF01209 ubiE/COQ5 methyltransferase family 20 250 5.3E-106 T 15-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 AM378_20440 62b0d31279232217b8f625ad6e329f0d 251 TIGRFAM TIGR01934 MenG_MenH_UbiE: ubiquinone/menaquinone biosynthesis methyltransferase 25 250 3.4E-86 T 15-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 AM378_20440 62b0d31279232217b8f625ad6e329f0d 251 Gene3D G3DSA:3.40.50.150 31 251 2.6E-75 T 15-10-2018 AM378_20440 62b0d31279232217b8f625ad6e329f0d 251 Hamap MF_01813 Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE [ubiE]. 16 250 39.339 T 15-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 AM378_20440 62b0d31279232217b8f625ad6e329f0d 251 ProSitePatterns PS01184 ubiE/COQ5 methyltransferase family signature 2. 158 172 - T 15-10-2018 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 AM378_17055 f09b16268c5695e3921e3b2898843ee5 255 SUPERFAMILY SSF53850 4 251 3.8E-52 T 15-10-2018 AM378_17055 f09b16268c5695e3921e3b2898843ee5 255 Gene3D G3DSA:3.40.190.10 117 208 7.5E-77 T 15-10-2018 AM378_17055 f09b16268c5695e3921e3b2898843ee5 255 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 53 66 - T 15-10-2018 IPR018313 Solute-binding protein family 3, conserved site AM378_17055 f09b16268c5695e3921e3b2898843ee5 255 SMART SM00062 30 254 8.8E-41 T 15-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AM378_17055 f09b16268c5695e3921e3b2898843ee5 255 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 31 251 8.2E-43 T 15-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AM378_17055 f09b16268c5695e3921e3b2898843ee5 255 Gene3D G3DSA:3.40.190.10 22 241 7.5E-77 T 15-10-2018 AM378_15190 d5292d7c0556719c35111189ff0316a3 387 Hamap MF_00145 Phosphoglycerate kinase [pgk]. 8 383 38.873 T 15-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM378_15190 d5292d7c0556719c35111189ff0316a3 387 Gene3D G3DSA:3.40.50.1260 165 373 4.1E-153 T 15-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM378_15190 d5292d7c0556719c35111189ff0316a3 387 PRINTS PR00477 Phosphoglycerate kinase family signature 31 53 8.1E-83 T 15-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM378_15190 d5292d7c0556719c35111189ff0316a3 387 PRINTS PR00477 Phosphoglycerate kinase family signature 10 26 8.1E-83 T 15-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM378_15190 d5292d7c0556719c35111189ff0316a3 387 PRINTS PR00477 Phosphoglycerate kinase family signature 336 347 8.1E-83 T 15-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM378_15190 d5292d7c0556719c35111189ff0316a3 387 PRINTS PR00477 Phosphoglycerate kinase family signature 359 376 8.1E-83 T 15-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM378_15190 d5292d7c0556719c35111189ff0316a3 387 PRINTS PR00477 Phosphoglycerate kinase family signature 132 154 8.1E-83 T 15-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM378_15190 d5292d7c0556719c35111189ff0316a3 387 PRINTS PR00477 Phosphoglycerate kinase family signature 163 185 8.1E-83 T 15-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM378_15190 d5292d7c0556719c35111189ff0316a3 387 PRINTS PR00477 Phosphoglycerate kinase family signature 186 205 8.1E-83 T 15-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM378_15190 d5292d7c0556719c35111189ff0316a3 387 PRINTS PR00477 Phosphoglycerate kinase family signature 104 119 8.1E-83 T 15-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM378_15190 d5292d7c0556719c35111189ff0316a3 387 PRINTS PR00477 Phosphoglycerate kinase family signature 303 328 8.1E-83 T 15-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM378_15190 d5292d7c0556719c35111189ff0316a3 387 Pfam PF00162 Phosphoglycerate kinase 6 373 3.4E-138 T 15-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM378_15190 d5292d7c0556719c35111189ff0316a3 387 Gene3D G3DSA:3.40.50.1260 10 378 4.1E-153 T 15-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM378_15190 d5292d7c0556719c35111189ff0316a3 387 SUPERFAMILY SSF53748 3 383 9.07E-143 T 15-10-2018 IPR036043 Phosphoglycerate kinase superfamily GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM378_15190 d5292d7c0556719c35111189ff0316a3 387 ProSitePatterns PS00111 Phosphoglycerate kinase signature. 15 25 - T 15-10-2018 IPR015911 Phosphoglycerate kinase, conserved site GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM378_15190 d5292d7c0556719c35111189ff0316a3 387 PIRSF PIRSF000724 1 387 9.2E-131 T 15-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM378_12620 30e125f62a15c4711ba6335f6cc63611 362 SMART SM00382 27 214 1.9E-18 T 15-10-2018 IPR003593 AAA+ ATPase domain AM378_12620 30e125f62a15c4711ba6335f6cc63611 362 SUPERFAMILY SSF52540 3 244 2.08E-86 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_12620 30e125f62a15c4711ba6335f6cc63611 362 TIGRFAM TIGR00968 3a0106s01: sulfate ABC transporter, ATP-binding protein 3 243 1.9E-124 T 15-10-2018 IPR005666 Sulphate transport system permease protein 1 GO:0008272|GO:0015419|GO:0016020|GO:0043190 KEGG: 00920+3.6.3.25 AM378_12620 30e125f62a15c4711ba6335f6cc63611 362 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM378_12620 30e125f62a15c4711ba6335f6cc63611 362 Pfam PF00005 ABC transporter 18 164 1.5E-36 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM378_12620 30e125f62a15c4711ba6335f6cc63611 362 Gene3D G3DSA:3.40.50.300 2 268 7.9E-81 T 15-10-2018 AM378_12620 30e125f62a15c4711ba6335f6cc63611 362 SUPERFAMILY SSF50331 239 326 2.21E-9 T 15-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal AM378_13080 906bce37bbf7c2b87b782e6a7c1f1f52 1039 Hamap MF_01423 Multidrug resistance protein MdtB [mdtB]. 1 1036 34.846 T 15-10-2018 IPR022831 Multidrug resistance protein MdtB AM378_13080 906bce37bbf7c2b87b782e6a7c1f1f52 1039 Gene3D G3DSA:3.30.2090.10 188 278 6.6E-298 T 15-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AM378_13080 906bce37bbf7c2b87b782e6a7c1f1f52 1039 Gene3D G3DSA:3.30.2090.10 715 803 6.6E-298 T 15-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AM378_13080 906bce37bbf7c2b87b782e6a7c1f1f52 1039 SUPERFAMILY SSF82714 192 275 1.23E-16 T 15-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AM378_13080 906bce37bbf7c2b87b782e6a7c1f1f52 1039 PRINTS PR00702 Acriflavin resistance protein family signature 394 418 2.7E-82 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AM378_13080 906bce37bbf7c2b87b782e6a7c1f1f52 1039 PRINTS PR00702 Acriflavin resistance protein family signature 339 362 2.7E-82 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AM378_13080 906bce37bbf7c2b87b782e6a7c1f1f52 1039 PRINTS PR00702 Acriflavin resistance protein family signature 366 387 2.7E-82 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AM378_13080 906bce37bbf7c2b87b782e6a7c1f1f52 1039 PRINTS PR00702 Acriflavin resistance protein family signature 47 65 2.7E-82 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AM378_13080 906bce37bbf7c2b87b782e6a7c1f1f52 1039 PRINTS PR00702 Acriflavin resistance protein family signature 19 43 2.7E-82 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AM378_13080 906bce37bbf7c2b87b782e6a7c1f1f52 1039 PRINTS PR00702 Acriflavin resistance protein family signature 447 470 2.7E-82 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AM378_13080 906bce37bbf7c2b87b782e6a7c1f1f52 1039 PRINTS PR00702 Acriflavin resistance protein family signature 619 633 2.7E-82 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AM378_13080 906bce37bbf7c2b87b782e6a7c1f1f52 1039 PRINTS PR00702 Acriflavin resistance protein family signature 472 495 2.7E-82 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AM378_13080 906bce37bbf7c2b87b782e6a7c1f1f52 1039 PRINTS PR00702 Acriflavin resistance protein family signature 552 569 2.7E-82 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AM378_13080 906bce37bbf7c2b87b782e6a7c1f1f52 1039 Pfam PF00873 AcrB/AcrD/AcrF family 13 1022 0.0 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AM378_13080 906bce37bbf7c2b87b782e6a7c1f1f52 1039 SUPERFAMILY SSF82693 565 662 4.71E-17 T 15-10-2018 AM378_13080 906bce37bbf7c2b87b782e6a7c1f1f52 1039 SUPERFAMILY SSF82693 49 142 3.14E-22 T 15-10-2018 AM378_13080 906bce37bbf7c2b87b782e6a7c1f1f52 1039 SUPERFAMILY SSF82693 146 333 5.76E-21 T 15-10-2018 AM378_13080 906bce37bbf7c2b87b782e6a7c1f1f52 1039 Gene3D G3DSA:1.20.1640.10 513 1019 6.6E-298 T 15-10-2018 AM378_13080 906bce37bbf7c2b87b782e6a7c1f1f52 1039 Gene3D G3DSA:3.30.70.1320 144 335 6.6E-298 T 15-10-2018 AM378_13080 906bce37bbf7c2b87b782e6a7c1f1f52 1039 SUPERFAMILY SSF82866 799 1025 3.92E-45 T 15-10-2018 AM378_13080 906bce37bbf7c2b87b782e6a7c1f1f52 1039 Gene3D G3DSA:3.30.70.1430 49 811 6.6E-298 T 15-10-2018 AM378_13080 906bce37bbf7c2b87b782e6a7c1f1f52 1039 SUPERFAMILY SSF82714 719 802 3.53E-17 T 15-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AM378_13080 906bce37bbf7c2b87b782e6a7c1f1f52 1039 Gene3D G3DSA:1.20.1640.10 19 512 6.6E-298 T 15-10-2018 AM378_13080 906bce37bbf7c2b87b782e6a7c1f1f52 1039 Gene3D G3DSA:3.30.70.1440 663 861 6.6E-298 T 15-10-2018 AM378_13080 906bce37bbf7c2b87b782e6a7c1f1f52 1039 Gene3D G3DSA:3.30.70.1430 567 662 6.6E-298 T 15-10-2018 AM378_13080 906bce37bbf7c2b87b782e6a7c1f1f52 1039 SUPERFAMILY SSF82866 299 498 1.7E-45 T 15-10-2018 AM378_19685 bf47aee6262dfebe3c60aa97a1da7335 91 SUPERFAMILY SSF143011 1 88 7.45E-5 T 15-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily AM378_19685 bf47aee6262dfebe3c60aa97a1da7335 91 Gene3D G3DSA:3.30.2310.20 1 91 9.0E-15 T 15-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily AM378_19685 bf47aee6262dfebe3c60aa97a1da7335 91 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 3 90 8.7E-16 T 15-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family AM378_15570 9873e5e2c43a5243de9ccdfb43931834 187 Gene3D G3DSA:3.40.1740.10 1 187 7.8E-64 T 15-10-2018 AM378_15570 9873e5e2c43a5243de9ccdfb43931834 187 Pfam PF02622 Uncharacterized ACR, COG1678 12 174 6.5E-49 T 15-10-2018 IPR003774 Protein of unknown function UPF0301 AM378_15570 9873e5e2c43a5243de9ccdfb43931834 187 Hamap MF_00758 UPF0301 protein YqgE [yqgE]. 1 187 39.425 T 15-10-2018 IPR003774 Protein of unknown function UPF0301 AM378_15570 9873e5e2c43a5243de9ccdfb43931834 187 SUPERFAMILY SSF143456 1 187 4.32E-66 T 15-10-2018 AM378_18890 3e141d586da7fcabecf519bd9b69f8f3 348 SUPERFAMILY SSF53756 1 343 7.74E-101 T 15-10-2018 AM378_18890 3e141d586da7fcabecf519bd9b69f8f3 348 TIGRFAM TIGR02195 heptsyl_trn_II: lipopolysaccharide heptosyltransferase II 2 343 5.1E-166 T 15-10-2018 IPR011910 ADP-heptose--LPS heptosyltransferase 2 GO:0009103|GO:0016757 AM378_18890 3e141d586da7fcabecf519bd9b69f8f3 348 Gene3D G3DSA:3.40.50.2000 1 151 2.8E-62 T 15-10-2018 AM378_18890 3e141d586da7fcabecf519bd9b69f8f3 348 Gene3D G3DSA:3.40.50.2000 163 347 2.4E-66 T 15-10-2018 AM378_18890 3e141d586da7fcabecf519bd9b69f8f3 348 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 69 324 7.2E-85 T 15-10-2018 IPR002201 Glycosyl transferase, family 9 GO:0016757 AM378_17615 b7c6d4ab1d2f9182c9244fe5ae9accd5 342 SUPERFAMILY SSF53822 61 331 8.88E-80 T 15-10-2018 IPR028082 Periplasmic binding protein-like I AM378_17615 b7c6d4ab1d2f9182c9244fe5ae9accd5 342 Gene3D G3DSA:3.40.50.2300 63 306 1.8E-69 T 15-10-2018 AM378_17615 b7c6d4ab1d2f9182c9244fe5ae9accd5 342 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 7.6E-7 T 15-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM378_17615 b7c6d4ab1d2f9182c9244fe5ae9accd5 342 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 7.6E-7 T 15-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM378_17615 b7c6d4ab1d2f9182c9244fe5ae9accd5 342 Gene3D G3DSA:1.10.260.40 1 57 1.8E-22 T 15-10-2018 AM378_17615 b7c6d4ab1d2f9182c9244fe5ae9accd5 342 SMART SM00354 1 71 5.7E-31 T 15-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM378_17615 b7c6d4ab1d2f9182c9244fe5ae9accd5 342 Pfam PF13377 Periplasmic binding protein-like domain 169 329 1.1E-34 T 15-10-2018 AM378_17615 b7c6d4ab1d2f9182c9244fe5ae9accd5 342 Gene3D G3DSA:3.40.50.2300 160 289 1.8E-69 T 15-10-2018 AM378_17615 b7c6d4ab1d2f9182c9244fe5ae9accd5 342 SUPERFAMILY SSF47413 1 56 4.29E-17 T 15-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AM378_17615 b7c6d4ab1d2f9182c9244fe5ae9accd5 342 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 15-10-2018 AM378_17615 b7c6d4ab1d2f9182c9244fe5ae9accd5 342 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 1.4E-21 T 15-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM378_23780 a464155af5bc3d6abad0454957e1e37a 397 Gene3D G3DSA:1.20.1250.20 13 393 1.6E-43 T 15-10-2018 AM378_23780 a464155af5bc3d6abad0454957e1e37a 397 SUPERFAMILY SSF103473 8 393 1.19E-54 T 15-10-2018 IPR036259 MFS transporter superfamily AM378_23780 a464155af5bc3d6abad0454957e1e37a 397 Pfam PF07690 Major Facilitator Superfamily 24 336 5.3E-28 T 15-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM378_00965 ce55a785c824d611b7b940769c052dc4 247 Gene3D G3DSA:3.40.1390.30 14 232 4.1E-86 T 15-10-2018 AM378_00965 ce55a785c824d611b7b940769c052dc4 247 Gene3D G3DSA:3.40.1390.30 97 218 4.1E-86 T 15-10-2018 AM378_00965 ce55a785c824d611b7b940769c052dc4 247 TIGRFAM TIGR00486 YbgI_SA1388: dinuclear metal center protein, YbgI/SA1388 family 1 246 5.0E-72 T 15-10-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 AM378_00965 ce55a785c824d611b7b940769c052dc4 247 Pfam PF01784 NIF3 (NGG1p interacting factor 3) 6 233 1.1E-56 T 15-10-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 AM378_00965 ce55a785c824d611b7b940769c052dc4 247 SUPERFAMILY SSF102705 1 246 1.57E-83 T 15-10-2018 IPR036069 GTP cyclohydrolase 1 type 2/Nif3 superfamily AM378_13240 b9a29c7690952538d81540a2a7579eef 593 SUPERFAMILY SSF52172 477 590 5.69E-16 T 15-10-2018 IPR011006 CheY-like superfamily AM378_13240 b9a29c7690952538d81540a2a7579eef 593 SUPERFAMILY SSF47384 210 293 1.35E-13 T 15-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AM378_13240 b9a29c7690952538d81540a2a7579eef 593 Pfam PF00072 Response regulator receiver domain 478 587 4.1E-9 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM378_13240 b9a29c7690952538d81540a2a7579eef 593 Gene3D G3DSA:3.30.565.10 297 450 4.5E-31 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AM378_13240 b9a29c7690952538d81540a2a7579eef 593 PRINTS PR00344 Bacterial sensor protein C-terminal signature 409 427 8.8E-8 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM378_13240 b9a29c7690952538d81540a2a7579eef 593 PRINTS PR00344 Bacterial sensor protein C-terminal signature 392 402 8.8E-8 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM378_13240 b9a29c7690952538d81540a2a7579eef 593 PRINTS PR00344 Bacterial sensor protein C-terminal signature 433 446 8.8E-8 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM378_13240 b9a29c7690952538d81540a2a7579eef 593 PRINTS PR00344 Bacterial sensor protein C-terminal signature 374 388 8.8E-8 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM378_13240 b9a29c7690952538d81540a2a7579eef 593 SMART SM00387 338 449 3.5E-19 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AM378_13240 b9a29c7690952538d81540a2a7579eef 593 SMART SM00388 227 292 6.5E-9 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM378_13240 b9a29c7690952538d81540a2a7579eef 593 SMART SM00448 475 587 8.7E-6 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM378_13240 b9a29c7690952538d81540a2a7579eef 593 Gene3D G3DSA:3.40.50.2300 476 592 2.1E-14 T 15-10-2018 AM378_13240 b9a29c7690952538d81540a2a7579eef 593 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 338 445 3.3E-17 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AM378_13240 b9a29c7690952538d81540a2a7579eef 593 Pfam PF00512 His Kinase A (phospho-acceptor) domain 228 292 2.2E-9 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM378_13240 b9a29c7690952538d81540a2a7579eef 593 SUPERFAMILY SSF55874 281 445 3.93E-35 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AM378_13240 b9a29c7690952538d81540a2a7579eef 593 Gene3D G3DSA:1.10.287.130 194 290 3.3E-14 T 15-10-2018 AM378_11530 7646bf332c32ba4e5a88f3c33efd5d86 1023 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 76 152 5.2E-5 T 15-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM378_11530 7646bf332c32ba4e5a88f3c33efd5d86 1023 Gene3D G3DSA:3.40.50.740 561 737 8.7E-17 T 15-10-2018 AM378_11530 7646bf332c32ba4e5a88f3c33efd5d86 1023 Gene3D G3DSA:3.40.50.740 156 185 9.3E-7 T 15-10-2018 AM378_11530 7646bf332c32ba4e5a88f3c33efd5d86 1023 SMART SM00926 71 153 6.3E-15 T 15-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM378_11530 7646bf332c32ba4e5a88f3c33efd5d86 1023 Gene3D G3DSA:2.40.40.20 853 999 7.1E-20 T 15-10-2018 AM378_11530 7646bf332c32ba4e5a88f3c33efd5d86 1023 SUPERFAMILY SSF50692 873 998 6.56E-24 T 15-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily AM378_11530 7646bf332c32ba4e5a88f3c33efd5d86 1023 Pfam PF01568 Molydopterin dinucleotide binding domain 894 988 1.7E-11 T 15-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 AM378_11530 7646bf332c32ba4e5a88f3c33efd5d86 1023 SUPERFAMILY SSF53706 75 866 1.96E-108 T 15-10-2018 AM378_11530 7646bf332c32ba4e5a88f3c33efd5d86 1023 Pfam PF00384 Molybdopterin oxidoreductase 243 683 7.1E-12 T 15-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM378_19165 d8afe29a331a5f851c61538aefe61e2e 172 TIGRFAM TIGR00176 mobB: molybdopterin-guanine dinucleotide biosynthesis protein B 9 167 2.7E-46 T 15-10-2018 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 AM378_19165 d8afe29a331a5f851c61538aefe61e2e 172 Gene3D G3DSA:3.40.50.300 10 164 7.6E-59 T 15-10-2018 AM378_19165 d8afe29a331a5f851c61538aefe61e2e 172 Gene3D G3DSA:2.20.25.120 52 84 7.6E-59 T 15-10-2018 AM378_19165 d8afe29a331a5f851c61538aefe61e2e 172 SUPERFAMILY SSF52540 6 168 4.86E-24 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_19165 d8afe29a331a5f851c61538aefe61e2e 172 Pfam PF03205 Molybdopterin guanine dinucleotide synthesis protein B 9 142 3.6E-47 T 15-10-2018 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 AM378_09885 3b08b336d91db0158f190117ab2226e6 355 SUPERFAMILY SSF141571 155 319 1.08E-30 T 15-10-2018 AM378_09885 3b08b336d91db0158f190117ab2226e6 355 Pfam PF13599 Pentapeptide repeats (9 copies) 22 78 1.8E-10 T 15-10-2018 IPR001646 Pentapeptide repeat AM378_09885 3b08b336d91db0158f190117ab2226e6 355 Pfam PF13599 Pentapeptide repeats (9 copies) 171 247 1.3E-10 T 15-10-2018 IPR001646 Pentapeptide repeat AM378_09885 3b08b336d91db0158f190117ab2226e6 355 Pfam PF00805 Pentapeptide repeats (8 copies) 121 158 0.0056 T 15-10-2018 IPR001646 Pentapeptide repeat AM378_09885 3b08b336d91db0158f190117ab2226e6 355 Pfam PF00805 Pentapeptide repeats (8 copies) 271 309 2.0E-6 T 15-10-2018 IPR001646 Pentapeptide repeat AM378_09885 3b08b336d91db0158f190117ab2226e6 355 Gene3D G3DSA:2.160.20.80 179 345 1.7E-26 T 15-10-2018 AM378_09885 3b08b336d91db0158f190117ab2226e6 355 SUPERFAMILY SSF141571 11 175 8.14E-31 T 15-10-2018 AM378_09885 3b08b336d91db0158f190117ab2226e6 355 Gene3D G3DSA:2.160.20.100 2 178 3.4E-31 T 15-10-2018 AM378_03385 25ddc8d907d8c6cdf9a50a3e27ba432a 72 Pfam PF01176 Translation initiation factor 1A / IF-1 7 70 3.1E-27 T 15-10-2018 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 AM378_03385 25ddc8d907d8c6cdf9a50a3e27ba432a 72 SMART SM00316 4 72 4.3E-7 T 15-10-2018 IPR022967 RNA-binding domain, S1 AM378_03385 25ddc8d907d8c6cdf9a50a3e27ba432a 72 Gene3D G3DSA:2.40.50.140 1 72 9.2E-36 T 15-10-2018 AM378_03385 25ddc8d907d8c6cdf9a50a3e27ba432a 72 SUPERFAMILY SSF50249 1 70 1.18E-28 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold AM378_03385 25ddc8d907d8c6cdf9a50a3e27ba432a 72 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 3 71 1.3E-38 T 15-10-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 AM378_03385 25ddc8d907d8c6cdf9a50a3e27ba432a 72 Hamap MF_00075 Translation initiation factor IF-1 [infA]. 1 72 27.17 T 15-10-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 AM378_19230 5871ac460afc7436fa03cbadc581bdcb 622 Hamap MF_01522 Low affinity potassium transport system protein kup [kup]. 5 622 33.559 T 15-10-2018 IPR023051 Potassium uptake protein, low affinity, Kup AM378_19230 5871ac460afc7436fa03cbadc581bdcb 622 Pfam PF02705 K+ potassium transporter 14 544 7.3E-207 T 15-10-2018 IPR003855 Potassium transporter GO:0015079|GO:0016020|GO:0071805 AM378_19230 5871ac460afc7436fa03cbadc581bdcb 622 TIGRFAM TIGR00794 kup: potassium uptake protein 97 550 8.8E-185 T 15-10-2018 IPR003855 Potassium transporter GO:0015079|GO:0016020|GO:0071805 AM378_09715 06b01ee7c41b107aa6b844bbe415bb63 407 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 9 29 - T 15-10-2018 IPR019776 Flagellar basal body rod protein, conserved site AM378_09715 06b01ee7c41b107aa6b844bbe415bb63 407 Pfam PF00460 Flagella basal body rod protein 4 33 4.3E-11 T 15-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 AM378_09715 06b01ee7c41b107aa6b844bbe415bb63 407 Pfam PF07559 Flagellar basal body protein FlaE 172 288 1.9E-22 T 15-10-2018 IPR011491 Flagellar hook protein FlgE AM378_09715 06b01ee7c41b107aa6b844bbe415bb63 407 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 1 389 1.5E-98 T 15-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G AM378_09715 06b01ee7c41b107aa6b844bbe415bb63 407 SUPERFAMILY SSF117143 73 368 1.14E-83 T 15-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like AM378_09715 06b01ee7c41b107aa6b844bbe415bb63 407 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 329 406 7.9E-22 T 15-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain AM378_09715 06b01ee7c41b107aa6b844bbe415bb63 407 Gene3D G3DSA:2.60.98.20 146 289 9.2E-37 T 15-10-2018 IPR037058 Flagellar hook protein FlgE superfamily AM378_11605 dbb07c22611983dd3d0e4ddce5d0f017 900 SUPERFAMILY SSF47226 799 891 8.77E-19 T 15-10-2018 IPR036641 HPT domain superfamily GO:0000160 AM378_11605 dbb07c22611983dd3d0e4ddce5d0f017 900 Pfam PF01627 Hpt domain 813 869 6.7E-10 T 15-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 AM378_11605 dbb07c22611983dd3d0e4ddce5d0f017 900 Hamap MF_00980 Phosphotransferase RcsD [rcsD]. 9 892 26.182 T 15-10-2018 IPR030861 Phosphotransferase RcsD GO:0000160|GO:0005887|GO:0009927 AM378_11605 dbb07c22611983dd3d0e4ddce5d0f017 900 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 562 672 3.3E-14 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AM378_11605 dbb07c22611983dd3d0e4ddce5d0f017 900 SUPERFAMILY SSF47384 435 515 2.35E-5 T 15-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AM378_11605 dbb07c22611983dd3d0e4ddce5d0f017 900 Gene3D G3DSA:3.30.565.10 513 670 9.5E-23 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AM378_11605 dbb07c22611983dd3d0e4ddce5d0f017 900 SMART SM00387 562 675 6.7E-9 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AM378_11605 dbb07c22611983dd3d0e4ddce5d0f017 900 Gene3D G3DSA:3.40.50.11620 683 795 6.4E-40 T 15-10-2018 IPR038616 Phosphotransferase RcsD, RcsD-ABL domain superfamily AM378_11605 dbb07c22611983dd3d0e4ddce5d0f017 900 SUPERFAMILY SSF55874 504 671 2.74E-18 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AM378_11605 dbb07c22611983dd3d0e4ddce5d0f017 900 Pfam PF16359 RcsD-ABL domain 684 784 5.6E-39 T 15-10-2018 IPR032306 Phosphotransferase RcsD, RcsD-ABL domain AM378_11605 dbb07c22611983dd3d0e4ddce5d0f017 900 Gene3D G3DSA:1.10.287.130 461 512 9.5E-23 T 15-10-2018 AM378_11605 dbb07c22611983dd3d0e4ddce5d0f017 900 Gene3D G3DSA:1.20.120.160 796 896 4.6E-10 T 15-10-2018 IPR036641 HPT domain superfamily GO:0000160 AM378_00685 3e7b8de98e426dc3552a2bef16092be9 156 Hamap MF_00658 Ribosomal RNA large subunit methyltransferase H [rlmH]. 1 155 26.129 T 15-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 AM378_00685 3e7b8de98e426dc3552a2bef16092be9 156 SUPERFAMILY SSF75217 2 154 6.28E-48 T 15-10-2018 IPR029028 Alpha/beta knot methyltransferases AM378_00685 3e7b8de98e426dc3552a2bef16092be9 156 TIGRFAM TIGR00246 tRNA_RlmH_YbeA: rRNA large subunit m3Psi methyltransferase RlmH 1 156 1.6E-81 T 15-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 AM378_00685 3e7b8de98e426dc3552a2bef16092be9 156 PIRSF PIRSF004505 1 155 9.4E-40 T 15-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 AM378_00685 3e7b8de98e426dc3552a2bef16092be9 156 Gene3D G3DSA:3.40.1280.10 1 156 3.7E-51 T 15-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AM378_00685 3e7b8de98e426dc3552a2bef16092be9 156 Pfam PF02590 Predicted SPOUT methyltransferase 2 154 3.1E-46 T 15-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 AM378_01600 e9e18d36f9648660942af500c5900a0a 264 Pfam PF00557 Metallopeptidase family M24 14 243 3.3E-49 T 15-10-2018 IPR000994 Peptidase M24 AM378_01600 e9e18d36f9648660942af500c5900a0a 264 SUPERFAMILY SSF55920 4 255 2.75E-86 T 15-10-2018 IPR036005 Creatinase/aminopeptidase-like AM378_01600 e9e18d36f9648660942af500c5900a0a 264 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 169 187 - T 15-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 AM378_01600 e9e18d36f9648660942af500c5900a0a 264 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 4 251 1.1E-89 T 15-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 AM378_01600 e9e18d36f9648660942af500c5900a0a 264 Hamap MF_01974 Methionine aminopeptidase [map]. 4 252 37.317 T 15-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 AM378_01600 e9e18d36f9648660942af500c5900a0a 264 PRINTS PR00599 Methionine aminopeptidase-1 signature 194 206 2.9E-17 T 15-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 AM378_01600 e9e18d36f9648660942af500c5900a0a 264 PRINTS PR00599 Methionine aminopeptidase-1 signature 70 83 2.9E-17 T 15-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 AM378_01600 e9e18d36f9648660942af500c5900a0a 264 PRINTS PR00599 Methionine aminopeptidase-1 signature 163 175 2.9E-17 T 15-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 AM378_01600 e9e18d36f9648660942af500c5900a0a 264 PRINTS PR00599 Methionine aminopeptidase-1 signature 93 109 2.9E-17 T 15-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 AM378_01600 e9e18d36f9648660942af500c5900a0a 264 Gene3D G3DSA:3.90.230.10 2 259 3.8E-99 T 15-10-2018 AM378_07600 808b4003fcb1a321a031bccee855148d 270 SUPERFAMILY SSF50494 9 258 2.16E-29 T 15-10-2018 IPR009003 Peptidase S1, PA clan AM378_07600 808b4003fcb1a321a031bccee855148d 270 Gene3D G3DSA:2.40.10.10 35 238 4.3E-29 T 15-10-2018 AM378_07600 808b4003fcb1a321a031bccee855148d 270 ProSitePatterns PS00135 Serine proteases, trypsin family, serine active site. 213 224 - T 15-10-2018 IPR033116 Serine proteases, trypsin family, serine active site AM378_07600 808b4003fcb1a321a031bccee855148d 270 Pfam PF00089 Trypsin 45 240 7.9E-14 T 15-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 AM378_07600 808b4003fcb1a321a031bccee855148d 270 ProSitePatterns PS00134 Serine proteases, trypsin family, histidine active site. 76 81 - T 15-10-2018 IPR018114 Serine proteases, trypsin family, histidine active site GO:0004252|GO:0006508 AM378_07600 808b4003fcb1a321a031bccee855148d 270 Gene3D G3DSA:2.40.10.10 50 157 4.3E-29 T 15-10-2018 AM378_07600 808b4003fcb1a321a031bccee855148d 270 SMART SM00020 40 266 7.8E-4 T 15-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 AM378_07600 808b4003fcb1a321a031bccee855148d 270 PRINTS PR00839 V8 serine protease family signature 65 82 3.3E-6 T 15-10-2018 IPR008256 Peptidase S1B GO:0006508|GO:0008236 AM378_07600 808b4003fcb1a321a031bccee855148d 270 PRINTS PR00839 V8 serine protease family signature 40 57 3.3E-6 T 15-10-2018 IPR008256 Peptidase S1B GO:0006508|GO:0008236 AM378_04180 436129c22867d949ec4d45d5b899078f 562 SMART SM00917 422 554 9.9E-24 T 15-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 AM378_04180 436129c22867d949ec4d45d5b899078f 562 SUPERFAMILY SSF110921 445 552 2.62E-25 T 15-10-2018 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 AM378_04180 436129c22867d949ec4d45d5b899078f 562 Gene3D G3DSA:3.20.20.70 10 376 3.9E-154 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM378_04180 436129c22867d949ec4d45d5b899078f 562 Hamap MF_00572 2-isopropylmalate synthase [leuA]. 6 555 53.291 T 15-10-2018 IPR005668 2-isopropylmalate synthase GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 AM378_04180 436129c22867d949ec4d45d5b899078f 562 SUPERFAMILY SSF89000 388 436 2.98E-14 T 15-10-2018 AM378_04180 436129c22867d949ec4d45d5b899078f 562 Pfam PF00682 HMGL-like 31 311 1.8E-71 T 15-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 AM378_04180 436129c22867d949ec4d45d5b899078f 562 TIGRFAM TIGR00970 leuA_yeast: 2-isopropylmalate synthase 5 549 1.7E-243 T 15-10-2018 IPR005668 2-isopropylmalate synthase GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 AM378_04180 436129c22867d949ec4d45d5b899078f 562 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 38 54 - T 15-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 AM378_04180 436129c22867d949ec4d45d5b899078f 562 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 241 254 - T 15-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 AM378_04180 436129c22867d949ec4d45d5b899078f 562 SUPERFAMILY SSF51569 20 328 2.38E-96 T 15-10-2018 AM378_04180 436129c22867d949ec4d45d5b899078f 562 Gene3D G3DSA:3.30.160.270 377 552 8.5E-53 T 15-10-2018 AM378_04180 436129c22867d949ec4d45d5b899078f 562 Pfam PF08502 LeuA allosteric (dimerisation) domain 423 553 1.2E-19 T 15-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 AM378_03230 b386da8666e126b09af3163b57169fdd 281 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 79 269 1.0E-14 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AM378_03230 b386da8666e126b09af3163b57169fdd 281 Gene3D G3DSA:1.10.3720.10 15 271 1.1E-45 T 15-10-2018 IPR035906 MetI-like superfamily AM378_03230 b386da8666e126b09af3163b57169fdd 281 SUPERFAMILY SSF161098 8 268 6.28E-52 T 15-10-2018 IPR035906 MetI-like superfamily AM378_07260 6c5431d49fb26c65f9a461ce84bf7071 305 SUPERFAMILY SSF103481 189 292 3.14E-9 T 15-10-2018 AM378_07260 6c5431d49fb26c65f9a461ce84bf7071 305 SUPERFAMILY SSF103481 48 139 2.48E-5 T 15-10-2018 AM378_07260 6c5431d49fb26c65f9a461ce84bf7071 305 Pfam PF00892 EamA-like transporter family 161 285 1.5E-9 T 15-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AM378_12690 9bb7036b833ca60b049f1c40ccb27af3 267 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 183 260 1.0E-20 T 15-10-2018 IPR006260 TonB/TolA, C-terminal AM378_12690 9bb7036b833ca60b049f1c40ccb27af3 267 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 182 260 7.3E-18 T 15-10-2018 IPR037682 TonB, C-terminal GO:0055085 AM378_12690 9bb7036b833ca60b049f1c40ccb27af3 267 Gene3D G3DSA:3.30.1150.10 137 262 2.7E-30 T 15-10-2018 AM378_12690 9bb7036b833ca60b049f1c40ccb27af3 267 SUPERFAMILY SSF74653 143 261 1.83E-16 T 15-10-2018 AM378_22720 62173fa5b967a1dbfaff8a2ba1640322 553 SUPERFAMILY SSF53850 117 549 8.51E-64 T 15-10-2018 AM378_22720 62173fa5b967a1dbfaff8a2ba1640322 553 Pfam PF12793 Sugar transport-related sRNA regulator N-term 5 118 1.7E-41 T 15-10-2018 IPR025370 Transcriptional regulator SgrR, N-terminal HTH domain AM378_22720 62173fa5b967a1dbfaff8a2ba1640322 553 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 177 306 9.5E-18 T 15-10-2018 IPR000914 Solute-binding protein family 5 domain AM378_22720 62173fa5b967a1dbfaff8a2ba1640322 553 Gene3D G3DSA:3.40.190.10 113 314 3.8E-31 T 15-10-2018 AM378_22720 62173fa5b967a1dbfaff8a2ba1640322 553 Hamap MF_01449 HTH-type transcriptional regulator SgrR [sgrR]. 1 553 65.695 T 15-10-2018 IPR023767 Transcriptional regulator SgrR AM378_22720 62173fa5b967a1dbfaff8a2ba1640322 553 SUPERFAMILY SSF46785 4 56 7.96E-6 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM378_01760 32abd064a01bdc2eacf2786ae51265af 496 Gene3D G3DSA:3.20.20.80 6 375 1.5E-146 T 15-10-2018 AM378_01760 32abd064a01bdc2eacf2786ae51265af 496 SMART SM00642 5 403 2.0E-45 T 15-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AM378_01760 32abd064a01bdc2eacf2786ae51265af 496 Gene3D G3DSA:2.40.30.140 105 210 1.5E-146 T 15-10-2018 AM378_01760 32abd064a01bdc2eacf2786ae51265af 496 SUPERFAMILY SSF51011 406 492 1.38E-26 T 15-10-2018 AM378_01760 32abd064a01bdc2eacf2786ae51265af 496 Gene3D G3DSA:2.60.40.1180 409 493 1.9E-25 T 15-10-2018 IPR013780 Glycosyl hydrolase, all-beta AM378_01760 32abd064a01bdc2eacf2786ae51265af 496 SUPERFAMILY SSF51445 7 404 3.91E-93 T 15-10-2018 IPR017853 Glycoside hydrolase superfamily AM378_01760 32abd064a01bdc2eacf2786ae51265af 496 Pfam PF00128 Alpha amylase, catalytic domain 27 369 2.4E-21 T 15-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AM378_01760 32abd064a01bdc2eacf2786ae51265af 496 PIRSF PIRSF001021 1 495 2.7E-201 T 15-10-2018 IPR013776 Alpha-amylase, thermostable GO:0004553|GO:0005509|GO:0005975 KEGG: 00500+3.2.1.1 AM378_06910 17f57266167da67d5742926b6eb52ef9 626 SMART SM00065 26 171 2.5E-11 T 15-10-2018 IPR003018 GAF domain GO:0005515 AM378_06910 17f57266167da67d5742926b6eb52ef9 626 SUPERFAMILY SSF55781 30 162 8.24E-28 T 15-10-2018 AM378_06910 17f57266167da67d5742926b6eb52ef9 626 Pfam PF08447 PAS fold 203 288 1.3E-13 T 15-10-2018 IPR013655 PAS fold-3 GO:0005515 AM378_06910 17f57266167da67d5742926b6eb52ef9 626 Pfam PF00990 Diguanylate cyclase, GGDEF domain 463 619 4.2E-42 T 15-10-2018 IPR000160 GGDEF domain AM378_06910 17f57266167da67d5742926b6eb52ef9 626 Pfam PF08448 PAS fold 352 454 1.4E-11 T 15-10-2018 IPR013656 PAS fold-4 AM378_06910 17f57266167da67d5742926b6eb52ef9 626 Gene3D G3DSA:3.30.450.20 334 461 7.5E-20 T 15-10-2018 AM378_06910 17f57266167da67d5742926b6eb52ef9 626 SUPERFAMILY SSF55073 468 623 4.97E-41 T 15-10-2018 IPR029787 Nucleotide cyclase AM378_06910 17f57266167da67d5742926b6eb52ef9 626 SUPERFAMILY SSF55785 330 450 2.44E-16 T 15-10-2018 IPR035965 PAS domain superfamily AM378_06910 17f57266167da67d5742926b6eb52ef9 626 Gene3D G3DSA:3.30.450.40 8 167 3.3E-18 T 15-10-2018 IPR029016 GAF-like domain superfamily AM378_06910 17f57266167da67d5742926b6eb52ef9 626 Gene3D G3DSA:3.30.70.270 462 625 1.3E-49 T 15-10-2018 AM378_06910 17f57266167da67d5742926b6eb52ef9 626 Gene3D G3DSA:3.30.450.20 168 326 3.0E-28 T 15-10-2018 AM378_06910 17f57266167da67d5742926b6eb52ef9 626 SMART SM00086 252 294 1.1E-9 T 15-10-2018 IPR001610 PAC motif AM378_06910 17f57266167da67d5742926b6eb52ef9 626 SMART SM00267 452 624 1.8E-53 T 15-10-2018 IPR000160 GGDEF domain AM378_06910 17f57266167da67d5742926b6eb52ef9 626 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 459 622 2.8E-35 T 15-10-2018 IPR000160 GGDEF domain AM378_06910 17f57266167da67d5742926b6eb52ef9 626 SUPERFAMILY SSF55785 187 297 6.46E-24 T 15-10-2018 IPR035965 PAS domain superfamily AM378_06910 17f57266167da67d5742926b6eb52ef9 626 Pfam PF01590 GAF domain 31 154 1.7E-10 T 15-10-2018 IPR003018 GAF domain GO:0005515 AM378_06910 17f57266167da67d5742926b6eb52ef9 626 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 176 301 9.9E-26 T 15-10-2018 IPR000014 PAS domain AM378_06910 17f57266167da67d5742926b6eb52ef9 626 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 342 459 6.0E-13 T 15-10-2018 IPR000014 PAS domain AM378_06910 17f57266167da67d5742926b6eb52ef9 626 SMART SM00091 179 245 2.7E-10 T 15-10-2018 IPR000014 PAS domain AM378_06910 17f57266167da67d5742926b6eb52ef9 626 SMART SM00091 345 411 5.1E-4 T 15-10-2018 IPR000014 PAS domain AM378_00750 f5b58ed87e0d0a6cf224f15dd6f32597 298 SMART SM00062 37 269 1.5E-68 T 15-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AM378_00750 f5b58ed87e0d0a6cf224f15dd6f32597 298 Gene3D G3DSA:3.40.190.10 27 272 2.7E-104 T 15-10-2018 AM378_00750 f5b58ed87e0d0a6cf224f15dd6f32597 298 SUPERFAMILY SSF53850 3 270 1.52E-65 T 15-10-2018 AM378_00750 f5b58ed87e0d0a6cf224f15dd6f32597 298 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 38 267 5.3E-49 T 15-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AM378_00750 f5b58ed87e0d0a6cf224f15dd6f32597 298 Gene3D G3DSA:3.40.190.10 131 226 2.7E-104 T 15-10-2018 AM378_20785 61ea6eecb57cdfc4f6216eaaf63ed715 447 Gene3D G3DSA:3.30.559.30 214 443 1.0E-35 T 15-10-2018 AM378_20785 61ea6eecb57cdfc4f6216eaaf63ed715 447 SUPERFAMILY SSF52777 194 437 9.0E-28 T 15-10-2018 AM378_20785 61ea6eecb57cdfc4f6216eaaf63ed715 447 Gene3D G3DSA:3.30.559.10 13 209 1.7E-39 T 15-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 AM378_20785 61ea6eecb57cdfc4f6216eaaf63ed715 447 Pfam PF00668 Condensation domain 11 431 1.5E-36 T 15-10-2018 IPR001242 Condensation domain AM378_20785 61ea6eecb57cdfc4f6216eaaf63ed715 447 SUPERFAMILY SSF52777 13 188 2.45E-24 T 15-10-2018 AM378_02560 02273d0f018cf4accdf85c2fdeb9438d 511 PIRSF PIRSF002741 24 511 2.2E-106 T 15-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 AM378_02560 02273d0f018cf4accdf85c2fdeb9438d 511 Gene3D G3DSA:3.90.76.10 36 184 1.5E-172 T 15-10-2018 AM378_02560 02273d0f018cf4accdf85c2fdeb9438d 511 Gene3D G3DSA:3.40.190.10 185 495 1.5E-172 T 15-10-2018 AM378_02560 02273d0f018cf4accdf85c2fdeb9438d 511 Gene3D G3DSA:3.10.105.10 260 485 1.5E-172 T 15-10-2018 AM378_02560 02273d0f018cf4accdf85c2fdeb9438d 511 SUPERFAMILY SSF53850 30 510 1.01E-140 T 15-10-2018 AM378_02560 02273d0f018cf4accdf85c2fdeb9438d 511 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 69 426 8.1E-95 T 15-10-2018 IPR000914 Solute-binding protein family 5 domain AM378_06850 b444d31e2bf3bb98838cf5d6211bb048 303 SUPERFAMILY SSF56281 1 303 2.26E-59 T 15-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AM378_06850 b444d31e2bf3bb98838cf5d6211bb048 303 Pfam PF12706 Beta-lactamase superfamily domain 50 270 1.0E-36 T 15-10-2018 IPR001279 Metallo-beta-lactamase AM378_06850 b444d31e2bf3bb98838cf5d6211bb048 303 TIGRFAM TIGR02108 PQQ_syn_pqqB: coenzyme PQQ biosynthesis protein B 2 303 1.9E-118 T 15-10-2018 IPR011842 Coenzyme PQQ biosynthesis protein B AM378_06850 b444d31e2bf3bb98838cf5d6211bb048 303 Gene3D G3DSA:3.60.15.10 1 303 1.6E-90 T 15-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AM378_06850 b444d31e2bf3bb98838cf5d6211bb048 303 Hamap MF_00653 Coenzyme PQQ synthesis protein B [pqqB]. 1 303 157.115 T 15-10-2018 IPR011842 Coenzyme PQQ biosynthesis protein B AM378_09230 28b3beb75423344d352b2a429771689a 280 Pfam PF00005 ABC transporter 29 184 3.7E-23 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM378_09230 28b3beb75423344d352b2a429771689a 280 SMART SM00382 34 233 1.6E-11 T 15-10-2018 IPR003593 AAA+ ATPase domain AM378_09230 28b3beb75423344d352b2a429771689a 280 SUPERFAMILY SSF52540 21 246 3.86E-53 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_09230 28b3beb75423344d352b2a429771689a 280 Gene3D G3DSA:3.40.50.300 5 278 3.8E-72 T 15-10-2018 AM378_20650 bd076126dddea8535afccd88329b1c74 424 Gene3D G3DSA:3.30.565.10 267 418 4.6E-34 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AM378_20650 bd076126dddea8535afccd88329b1c74 424 PRINTS PR00344 Bacterial sensor protein C-terminal signature 405 418 1.6E-10 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM378_20650 bd076126dddea8535afccd88329b1c74 424 PRINTS PR00344 Bacterial sensor protein C-terminal signature 348 362 1.6E-10 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM378_20650 bd076126dddea8535afccd88329b1c74 424 PRINTS PR00344 Bacterial sensor protein C-terminal signature 381 399 1.6E-10 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM378_20650 bd076126dddea8535afccd88329b1c74 424 SMART SM00387 312 421 8.6E-23 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AM378_20650 bd076126dddea8535afccd88329b1c74 424 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 313 419 1.3E-20 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AM378_20650 bd076126dddea8535afccd88329b1c74 424 SUPERFAMILY SSF55874 259 419 2.49E-32 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AM378_20650 bd076126dddea8535afccd88329b1c74 424 Gene3D G3DSA:1.10.287.130 208 266 4.6E-34 T 15-10-2018 AM378_23515 b125c8601d9cb69cd27fa166ee0bbce0 180 Pfam PF03079 ARD/ARD' family 5 165 5.3E-33 T 15-10-2018 IPR004313 Acireductone dioxygenase ARD family GO:0010309|GO:0055114 KEGG: 00270+1.13.11.54|MetaCyc: PWY-4361|Reactome: R-HSA-1237112 AM378_23515 b125c8601d9cb69cd27fa166ee0bbce0 180 Gene3D G3DSA:2.60.120.10 2 157 6.2E-57 T 15-10-2018 IPR014710 RmlC-like jelly roll fold AM378_23515 b125c8601d9cb69cd27fa166ee0bbce0 180 SUPERFAMILY SSF51182 1 179 4.45E-43 T 15-10-2018 IPR011051 RmlC-like cupin domain superfamily AM378_23515 b125c8601d9cb69cd27fa166ee0bbce0 180 Hamap MF_01682 Acireductone dioxygenase [mtnD]. 1 172 38.901 T 15-10-2018 IPR023956 Acireductone dioxygenase ARD, bacteria GO:0005506|GO:0010308|GO:0010309|GO:0016151|GO:0019284|GO:0055114 KEGG: 00270+1.13.11.54+1.13.11.53|MetaCyc: PWY-4361|MetaCyc: PWY-5389 AM378_15045 eeaf7dc754bb4c2d917aa254cb02f9b8 192 SUPERFAMILY SSF101327 8 176 5.62E-51 T 15-10-2018 IPR036255 YgfB-like superfamily AM378_15045 eeaf7dc754bb4c2d917aa254cb02f9b8 192 Hamap MF_00346 UPF0149 protein YgfB [ygfB]. 6 190 36.586 T 15-10-2018 IPR011978 Uncharacterised protein family UPF0149 AM378_15045 eeaf7dc754bb4c2d917aa254cb02f9b8 192 TIGRFAM TIGR02292 ygfB_yecA: yecA family protein 16 166 9.0E-14 T 15-10-2018 IPR011978 Uncharacterised protein family UPF0149 AM378_15045 eeaf7dc754bb4c2d917aa254cb02f9b8 192 Gene3D G3DSA:1.20.120.740 5 192 9.0E-60 T 15-10-2018 AM378_15045 eeaf7dc754bb4c2d917aa254cb02f9b8 192 Pfam PF03695 Uncharacterised protein family (UPF0149) 13 177 5.2E-38 T 15-10-2018 IPR011978 Uncharacterised protein family UPF0149 AM378_07175 2906d88a2f71e4b2dbdff1ab92bc7e63 432 SUPERFAMILY SSF46626 303 416 1.45E-16 T 15-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM378_07175 2906d88a2f71e4b2dbdff1ab92bc7e63 432 SUPERFAMILY SSF46626 40 166 8.99E-23 T 15-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM378_07175 2906d88a2f71e4b2dbdff1ab92bc7e63 432 Gene3D G3DSA:1.10.760.10 1 151 2.1E-12 T 15-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM378_07175 2906d88a2f71e4b2dbdff1ab92bc7e63 432 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 324 405 1.2E-8 T 15-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM378_07175 2906d88a2f71e4b2dbdff1ab92bc7e63 432 PIRSF PIRSF000018 15 432 4.0E-144 T 15-10-2018 IPR014353 Membrane-bound alcohol dehydrogenase, cytochrome c subunit GO:0005506|GO:0016020|GO:0016614|GO:0020037 AM378_07175 2906d88a2f71e4b2dbdff1ab92bc7e63 432 Gene3D G3DSA:1.10.760.10 303 432 1.1E-21 T 15-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM378_07175 2906d88a2f71e4b2dbdff1ab92bc7e63 432 Gene3D G3DSA:1.10.760.10 181 298 4.1E-8 T 15-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM378_07175 2906d88a2f71e4b2dbdff1ab92bc7e63 432 Pfam PF00034 Cytochrome c 48 147 1.3E-7 T 15-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM378_07175 2906d88a2f71e4b2dbdff1ab92bc7e63 432 SUPERFAMILY SSF46626 182 301 2.34E-13 T 15-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM378_19260 c3d022f322b2ad0326ba39cd6b6e2ad7 629 ProSitePatterns PS01280 Glucose inhibited division protein A family signature 1. 273 287 - T 15-10-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 AM378_19260 c3d022f322b2ad0326ba39cd6b6e2ad7 629 Gene3D G3DSA:1.10.10.1800 459 550 1.2E-29 T 15-10-2018 AM378_19260 c3d022f322b2ad0326ba39cd6b6e2ad7 629 SUPERFAMILY SSF51905 6 261 3.11E-51 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AM378_19260 c3d022f322b2ad0326ba39cd6b6e2ad7 629 Gene3D G3DSA:1.10.150.570 570 622 1.3E-22 T 15-10-2018 AM378_19260 c3d022f322b2ad0326ba39cd6b6e2ad7 629 Pfam PF13932 GidA associated domain 403 616 5.7E-76 T 15-10-2018 IPR026904 GidA associated domain 3 Reactome: R-HSA-6787450 AM378_19260 c3d022f322b2ad0326ba39cd6b6e2ad7 629 SMART SM01228 546 617 9.3E-45 T 15-10-2018 AM378_19260 c3d022f322b2ad0326ba39cd6b6e2ad7 629 Pfam PF01134 Glucose inhibited division protein A 8 398 2.1E-168 T 15-10-2018 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 Reactome: R-HSA-6787450 AM378_19260 c3d022f322b2ad0326ba39cd6b6e2ad7 629 Hamap MF_00129 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [mnmG]. 5 624 42.687 T 15-10-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 AM378_19260 c3d022f322b2ad0326ba39cd6b6e2ad7 629 Gene3D G3DSA:3.50.50.60 293 458 5.6E-56 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AM378_19260 c3d022f322b2ad0326ba39cd6b6e2ad7 629 Gene3D G3DSA:3.50.50.60 2 234 4.3E-90 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AM378_19260 c3d022f322b2ad0326ba39cd6b6e2ad7 629 TIGRFAM TIGR00136 gidA: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 7 622 1.5E-297 T 15-10-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 AM378_19260 c3d022f322b2ad0326ba39cd6b6e2ad7 629 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 368 391 - T 15-10-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 AM378_06170 cdf4e46fd4012d23832c0b6bd63f3727 221 TIGRFAM TIGR00347 bioD: dethiobiotin synthase 6 172 6.0E-39 T 15-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 AM378_06170 cdf4e46fd4012d23832c0b6bd63f3727 221 SUPERFAMILY SSF52540 1 214 4.61E-57 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_06170 cdf4e46fd4012d23832c0b6bd63f3727 221 PIRSF PIRSF006755 1 221 2.7E-65 T 15-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 AM378_06170 cdf4e46fd4012d23832c0b6bd63f3727 221 Pfam PF13500 AAA domain 4 207 1.2E-31 T 15-10-2018 AM378_06170 cdf4e46fd4012d23832c0b6bd63f3727 221 Gene3D G3DSA:3.40.50.300 2 220 9.5E-57 T 15-10-2018 AM378_06170 cdf4e46fd4012d23832c0b6bd63f3727 221 Hamap MF_00336 ATP-dependent dethiobiotin synthetase BioD [bioD]. 2 214 23.881 T 15-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 AM378_09240 185b256300e7dc43ce1ce894742a3ed1 351 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 130 351 3.9E-43 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AM378_09240 185b256300e7dc43ce1ce894742a3ed1 351 SUPERFAMILY SSF161098 107 336 3.4E-20 T 15-10-2018 IPR035906 MetI-like superfamily AM378_08795 76844d5098c07ab891038006ed4e4ada 215 Pfam PF13417 Glutathione S-transferase, N-terminal domain 3 74 2.2E-11 T 15-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AM378_08795 76844d5098c07ab891038006ed4e4ada 215 ProSitePatterns PS00195 Glutaredoxin active site. 3 18 - T 15-10-2018 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 Reactome: R-HSA-499943 AM378_08795 76844d5098c07ab891038006ed4e4ada 215 Gene3D G3DSA:3.40.30.10 8 85 1.6E-35 T 15-10-2018 AM378_08795 76844d5098c07ab891038006ed4e4ada 215 Pfam PF04399 Glutaredoxin 2, C terminal domain 86 213 1.5E-48 T 15-10-2018 IPR007494 Glutaredoxin 2, C-terminal AM378_08795 76844d5098c07ab891038006ed4e4ada 215 TIGRFAM TIGR02182 GRXB: glutaredoxin, GrxB family 2 210 1.8E-88 T 15-10-2018 IPR011901 Glutaredoxin-2 GO:0005829|GO:0097573 AM378_08795 76844d5098c07ab891038006ed4e4ada 215 SUPERFAMILY SSF52833 1 87 4.19E-17 T 15-10-2018 IPR036249 Thioredoxin-like superfamily AM378_08795 76844d5098c07ab891038006ed4e4ada 215 Gene3D G3DSA:1.20.1050.10 90 214 4.5E-45 T 15-10-2018 AM378_08795 76844d5098c07ab891038006ed4e4ada 215 SUPERFAMILY SSF47616 76 212 5.72E-46 T 15-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily AM378_07000 cecdac9c948b50a4ccc5e0cd0edb75bb 307 SUPERFAMILY SSF53822 22 301 2.2E-71 T 15-10-2018 IPR028082 Periplasmic binding protein-like I AM378_07000 cecdac9c948b50a4ccc5e0cd0edb75bb 307 Gene3D G3DSA:3.40.50.2300 26 291 6.7E-79 T 15-10-2018 AM378_07000 cecdac9c948b50a4ccc5e0cd0edb75bb 307 Pfam PF13407 Periplasmic binding protein domain 26 279 7.8E-56 T 15-10-2018 IPR025997 Periplasmic binding protein AM378_07000 cecdac9c948b50a4ccc5e0cd0edb75bb 307 Gene3D G3DSA:3.40.50.2300 128 297 6.7E-79 T 15-10-2018 AM378_03320 476ceb0e59140caad21ab139f68730c9 231 Gene3D G3DSA:3.20.20.70 2 229 2.2E-91 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM378_03320 476ceb0e59140caad21ab139f68730c9 231 SUPERFAMILY SSF51366 8 227 7.22E-61 T 15-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 AM378_03320 476ceb0e59140caad21ab139f68730c9 231 Hamap MF_01235 Putative N-acetylmannosamine-6-phosphate 2-epimerase [nanE]. 7 229 40.498 T 15-10-2018 IPR007260 Putative N-acetylmannosamine-6-phosphate epimerase GO:0006051|GO:0047465 KEGG: 00520+5.1.3.9 AM378_03320 476ceb0e59140caad21ab139f68730c9 231 Pfam PF04131 Putative N-acetylmannosamine-6-phosphate epimerase 31 228 3.1E-66 T 15-10-2018 IPR007260 Putative N-acetylmannosamine-6-phosphate epimerase GO:0006051|GO:0047465 KEGG: 00520+5.1.3.9 AM378_04480 9991d43020a662f94f1da70196d9e329 395 Gene3D G3DSA:2.40.420.20 291 383 2.9E-20 T 15-10-2018 AM378_04480 9991d43020a662f94f1da70196d9e329 395 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 76 300 1.9E-18 T 15-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AM378_04480 9991d43020a662f94f1da70196d9e329 395 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 52 381 1.1E-82 T 15-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AM378_04480 9991d43020a662f94f1da70196d9e329 395 SUPERFAMILY SSF111369 67 304 7.06E-69 T 15-10-2018 AM378_04480 9991d43020a662f94f1da70196d9e329 395 Gene3D G3DSA:2.40.50.100 76 221 1.6E-73 T 15-10-2018 AM378_04480 9991d43020a662f94f1da70196d9e329 395 Gene3D G3DSA:2.40.30.170 70 290 1.6E-73 T 15-10-2018 AM378_04480 9991d43020a662f94f1da70196d9e329 395 Gene3D G3DSA:1.10.287.470 111 184 1.6E-73 T 15-10-2018 AM378_04540 7c5b92fee3b899a232c7c9a82d0ccfba 141 SUPERFAMILY SSF109635 3 98 2.88E-23 T 15-10-2018 IPR037187 DksA, N-terminal domain superfamily AM378_04540 7c5b92fee3b899a232c7c9a82d0ccfba 141 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 97 131 3.8E-8 T 15-10-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 AM378_04540 7c5b92fee3b899a232c7c9a82d0ccfba 141 Gene3D G3DSA:1.20.120.910 7 140 1.2E-36 T 15-10-2018 AM378_04540 7c5b92fee3b899a232c7c9a82d0ccfba 141 SUPERFAMILY SSF57716 99 137 7.27E-7 T 15-10-2018 AM378_04540 7c5b92fee3b899a232c7c9a82d0ccfba 141 TIGRFAM TIGR02420 dksA: RNA polymerase-binding protein DksA 21 128 5.4E-36 T 15-10-2018 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 AM378_21925 606890018ce5f75409d1ed51228c9f02 394 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 86 104 - T 15-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 AM378_21925 606890018ce5f75409d1ed51228c9f02 394 Gene3D G3DSA:3.40.47.10 128 390 1.1E-156 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 AM378_21925 606890018ce5f75409d1ed51228c9f02 394 Pfam PF02803 Thiolase, C-terminal domain 272 393 9.5E-50 T 15-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 AM378_21925 606890018ce5f75409d1ed51228c9f02 394 ProSitePatterns PS00737 Thiolases signature 2. 340 356 - T 15-10-2018 IPR020613 Thiolase, conserved site GO:0016747 AM378_21925 606890018ce5f75409d1ed51228c9f02 394 PIRSF PIRSF000429 1 394 7.5E-132 T 15-10-2018 IPR002155 Thiolase GO:0016747 AM378_21925 606890018ce5f75409d1ed51228c9f02 394 Pfam PF00108 Thiolase, N-terminal domain 6 263 5.3E-105 T 15-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 AM378_21925 606890018ce5f75409d1ed51228c9f02 394 SUPERFAMILY SSF53901 273 393 1.2E-42 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 AM378_21925 606890018ce5f75409d1ed51228c9f02 394 SUPERFAMILY SSF53901 5 271 1.18E-88 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 AM378_21925 606890018ce5f75409d1ed51228c9f02 394 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 8 392 4.5E-146 T 15-10-2018 IPR002155 Thiolase GO:0016747 AM378_21925 606890018ce5f75409d1ed51228c9f02 394 Gene3D G3DSA:3.40.47.10 8 277 1.1E-156 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 AM378_00105 dbfd90be24280809156dbbfa58713e86 629 ProSitePatterns PS00875 Bacterial type II secretion system protein D signature. 511 544 - T 15-10-2018 IPR004845 Type II secretion system GspD, conserved site GO:0008565 AM378_00105 dbfd90be24280809156dbbfa58713e86 629 Pfam PF03958 Bacterial type II/III secretion system short domain 252 329 7.5E-18 T 15-10-2018 IPR005644 NolW-like AM378_00105 dbfd90be24280809156dbbfa58713e86 629 Pfam PF03958 Bacterial type II/III secretion system short domain 112 172 5.2E-10 T 15-10-2018 IPR005644 NolW-like AM378_00105 dbfd90be24280809156dbbfa58713e86 629 Pfam PF03958 Bacterial type II/III secretion system short domain 177 244 8.1E-13 T 15-10-2018 IPR005644 NolW-like AM378_00105 dbfd90be24280809156dbbfa58713e86 629 PRINTS PR00811 Bacterial general secretion pathway protein D signature 397 421 1.4E-39 T 15-10-2018 IPR001775 GspD/PilQ family AM378_00105 dbfd90be24280809156dbbfa58713e86 629 PRINTS PR00811 Bacterial general secretion pathway protein D signature 329 339 1.4E-39 T 15-10-2018 IPR001775 GspD/PilQ family AM378_00105 dbfd90be24280809156dbbfa58713e86 629 PRINTS PR00811 Bacterial general secretion pathway protein D signature 432 442 1.4E-39 T 15-10-2018 IPR001775 GspD/PilQ family AM378_00105 dbfd90be24280809156dbbfa58713e86 629 PRINTS PR00811 Bacterial general secretion pathway protein D signature 553 567 1.4E-39 T 15-10-2018 IPR001775 GspD/PilQ family AM378_00105 dbfd90be24280809156dbbfa58713e86 629 PRINTS PR00811 Bacterial general secretion pathway protein D signature 530 548 1.4E-39 T 15-10-2018 IPR001775 GspD/PilQ family AM378_00105 dbfd90be24280809156dbbfa58713e86 629 TIGRFAM TIGR02517 type_II_gspD: type II secretion system protein D 15 571 3.2E-159 T 15-10-2018 IPR013356 Type II secretion system GspD GO:0008565|GO:0015627|GO:0015628|GO:0019867 AM378_00105 dbfd90be24280809156dbbfa58713e86 629 Gene3D G3DSA:3.30.1370.120 245 330 3.0E-18 T 15-10-2018 IPR038591 NolW-like superfamily AM378_00105 dbfd90be24280809156dbbfa58713e86 629 Pfam PF00263 Bacterial type II and III secretion system protein 401 566 5.0E-48 T 15-10-2018 IPR004846 Type II/III secretion system GO:0009306 AM378_00105 dbfd90be24280809156dbbfa58713e86 629 Gene3D G3DSA:3.30.1370.120 5 172 3.2E-49 T 15-10-2018 IPR038591 NolW-like superfamily AM378_00105 dbfd90be24280809156dbbfa58713e86 629 Gene3D G3DSA:3.30.1370.120 176 244 1.1E-16 T 15-10-2018 IPR038591 NolW-like superfamily AM378_20410 823a9206c2929638e9894e9455b2bbc5 757 PIRSF PIRSF000382 2 757 0.0 T 15-10-2018 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 AM378_20410 823a9206c2929638e9894e9455b2bbc5 757 SUPERFAMILY SSF51726 394 756 2.09E-118 T 15-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 AM378_20410 823a9206c2929638e9894e9455b2bbc5 757 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 429 751 2.7E-157 T 15-10-2018 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 AM378_20410 823a9206c2929638e9894e9455b2bbc5 757 Hamap MF_00172 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [metE]. 3 756 37.613 T 15-10-2018 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 AM378_20410 823a9206c2929638e9894e9455b2bbc5 757 SUPERFAMILY SSF51726 5 392 8.5E-114 T 15-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 AM378_20410 823a9206c2929638e9894e9455b2bbc5 757 Gene3D G3DSA:3.20.20.210 387 754 0.0 T 15-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 AM378_20410 823a9206c2929638e9894e9455b2bbc5 757 Gene3D G3DSA:3.20.20.210 7 522 0.0 T 15-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 AM378_20410 823a9206c2929638e9894e9455b2bbc5 757 Pfam PF08267 Cobalamin-independent synthase, N-terminal domain 5 312 3.7E-127 T 15-10-2018 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal GO:0003871|GO:0008270|GO:0008652 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 AM378_20410 823a9206c2929638e9894e9455b2bbc5 757 TIGRFAM TIGR01371 met_syn_B12ind: 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase 8 756 0.0 T 15-10-2018 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 AM378_07700 1b260d416420c6d9ba11210b5119111f 539 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 78 455 2.0E-88 T 15-10-2018 IPR000914 Solute-binding protein family 5 domain AM378_07700 1b260d416420c6d9ba11210b5119111f 539 Gene3D G3DSA:3.90.76.10 68 191 9.2E-195 T 15-10-2018 AM378_07700 1b260d416420c6d9ba11210b5119111f 539 Gene3D G3DSA:3.40.190.10 42 520 9.2E-195 T 15-10-2018 AM378_07700 1b260d416420c6d9ba11210b5119111f 539 SUPERFAMILY SSF53850 31 532 4.08E-144 T 15-10-2018 AM378_07700 1b260d416420c6d9ba11210b5119111f 539 Gene3D G3DSA:3.10.105.10 293 508 9.2E-195 T 15-10-2018 AM378_07700 1b260d416420c6d9ba11210b5119111f 539 PIRSF PIRSF002741 1 538 7.9E-118 T 15-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 AM378_23010 1152024af25f12f8cf6f4365dd2928bd 545 Hamap MF_01227 CTP synthase [pyrG]. 3 540 51.286 T 15-10-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 AM378_23010 1152024af25f12f8cf6f4365dd2928bd 545 SUPERFAMILY SSF52540 3 269 2.16E-122 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_23010 1152024af25f12f8cf6f4365dd2928bd 545 Gene3D G3DSA:3.40.50.300 1 285 1.1E-136 T 15-10-2018 AM378_23010 1152024af25f12f8cf6f4365dd2928bd 545 Pfam PF06418 CTP synthase N-terminus 5 266 4.0E-126 T 15-10-2018 IPR017456 CTP synthase, N-terminal GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 AM378_23010 1152024af25f12f8cf6f4365dd2928bd 545 Pfam PF00117 Glutamine amidotransferase class-I 301 535 8.1E-64 T 15-10-2018 IPR017926 Glutamine amidotransferase AM378_23010 1152024af25f12f8cf6f4365dd2928bd 545 SUPERFAMILY SSF52317 289 541 7.8E-88 T 15-10-2018 IPR029062 Class I glutamine amidotransferase-like AM378_23010 1152024af25f12f8cf6f4365dd2928bd 545 Gene3D G3DSA:3.40.50.880 287 545 3.4E-106 T 15-10-2018 IPR029062 Class I glutamine amidotransferase-like AM378_23010 1152024af25f12f8cf6f4365dd2928bd 545 TIGRFAM TIGR00337 PyrG: CTP synthase 2 535 2.5E-265 T 15-10-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 AM378_24040 489f9a327072377a31d0786bb0b20a83 134 SUPERFAMILY SSF54427 42 113 1.75E-5 T 15-10-2018 IPR032710 NTF2-like domain superfamily AM378_24040 489f9a327072377a31d0786bb0b20a83 134 Gene3D G3DSA:3.10.450.50 14 122 4.6E-6 T 15-10-2018 AM378_08785 2da88ed9ecc32e62ab053994b81d1df1 401 Pfam PF07690 Major Facilitator Superfamily 20 237 1.1E-21 T 15-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM378_08785 2da88ed9ecc32e62ab053994b81d1df1 401 SUPERFAMILY SSF103473 14 392 2.88E-50 T 15-10-2018 IPR036259 MFS transporter superfamily AM378_08785 2da88ed9ecc32e62ab053994b81d1df1 401 Gene3D G3DSA:1.20.1250.20 13 388 1.8E-46 T 15-10-2018 AM378_08785 2da88ed9ecc32e62ab053994b81d1df1 401 Hamap MF_01529 Multidrug resistance protein MdtH [mdtH]. 1 401 40.544 T 15-10-2018 IPR022855 Multidrug resistance protein MdtH AM378_10155 3a5518c0d52612a2fbaae1881084fd5b 320 Pfam PF04261 Dyp-type peroxidase family 9 305 3.9E-94 T 15-10-2018 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 AM378_10155 3a5518c0d52612a2fbaae1881084fd5b 320 TIGRFAM TIGR01413 Dyp_perox_fam: Dyp-type peroxidase family 9 305 5.3E-86 T 15-10-2018 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 AM378_10155 3a5518c0d52612a2fbaae1881084fd5b 320 SUPERFAMILY SSF54909 7 311 1.25E-106 T 15-10-2018 IPR011008 Dimeric alpha-beta barrel AM378_14885 941e3a1f2bae3c19543ee180f7485fad 140 PIRSF PIRSF020653 1 137 4.0E-55 T 15-10-2018 IPR009883 Inner membrane protein YgfX AM378_14885 941e3a1f2bae3c19543ee180f7485fad 140 ProDom PD083358 MEMBRANE YGFX INNER SIMILAR ECS3768 Y3281 ESCHERICHIA TRANSMEMBRANE YPO0896A STY3202 19 130 2.0E-27 T 15-10-2018 IPR009883 Inner membrane protein YgfX AM378_14885 941e3a1f2bae3c19543ee180f7485fad 140 Pfam PF07254 Membrane-bound toxin component of toxin-antitoxin system 2 130 1.6E-55 T 15-10-2018 IPR009883 Inner membrane protein YgfX AM378_12600 9ba5140bc2c4808a7b2076e58a91c9d3 169 SUPERFAMILY SSF51261 12 167 1.22E-55 T 15-10-2018 IPR011055 Duplicated hybrid motif AM378_12600 9ba5140bc2c4808a7b2076e58a91c9d3 169 TIGRFAM TIGR00830 PTBA: PTS system, glucose subfamily, IIA component 23 143 3.3E-50 T 15-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 AM378_12600 9ba5140bc2c4808a7b2076e58a91c9d3 169 Gene3D G3DSA:2.70.70.10 9 169 3.1E-63 T 15-10-2018 IPR011055 Duplicated hybrid motif AM378_12600 9ba5140bc2c4808a7b2076e58a91c9d3 169 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 22 146 1.1E-48 T 15-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 AM378_12600 9ba5140bc2c4808a7b2076e58a91c9d3 169 ProSitePatterns PS00371 PTS EIIA domains phosphorylation site signature 1. 85 97 - T 15-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 AM378_15615 9b55664cb7101680f20047968366c847 144 Gene3D G3DSA:1.20.1220.20 1 144 4.9E-34 T 15-10-2018 AM378_15615 9b55664cb7101680f20047968366c847 144 Pfam PF01724 Domain of unknown function DUF29 6 142 6.6E-43 T 15-10-2018 IPR002636 Protein from unkown function DUF29 AM378_22995 ad3721f255ff9f5ff7073bdf7b7ca69f 449 Gene3D G3DSA:3.40.1350.30 137 273 5.0E-122 T 15-10-2018 AM378_22995 ad3721f255ff9f5ff7073bdf7b7ca69f 449 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 423 433 - T 15-10-2018 IPR030391 RNA methyltransferase TrmA, conserved site AM378_22995 ad3721f255ff9f5ff7073bdf7b7ca69f 449 Gene3D G3DSA:2.40.50.140 1 90 6.2E-33 T 15-10-2018 AM378_22995 ad3721f255ff9f5ff7073bdf7b7ca69f 449 SUPERFAMILY SSF53335 79 438 3.78E-83 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM378_22995 ad3721f255ff9f5ff7073bdf7b7ca69f 449 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 372 402 - T 15-10-2018 IPR030390 RNA methyltransferase TrmA, active site AM378_22995 ad3721f255ff9f5ff7073bdf7b7ca69f 449 SUPERFAMILY SSF50249 14 69 3.2E-14 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold AM378_22995 ad3721f255ff9f5ff7073bdf7b7ca69f 449 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 104 437 9.2E-26 T 15-10-2018 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 AM378_22995 ad3721f255ff9f5ff7073bdf7b7ca69f 449 Hamap MF_01010 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD [rlmD]. 21 441 65.212 T 15-10-2018 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD GO:0003723|GO:0006396|GO:0008173 AM378_22995 ad3721f255ff9f5ff7073bdf7b7ca69f 449 Gene3D G3DSA:3.40.50.150 91 435 5.0E-122 T 15-10-2018 AM378_22995 ad3721f255ff9f5ff7073bdf7b7ca69f 449 Pfam PF01938 TRAM domain 18 69 2.5E-13 T 15-10-2018 IPR002792 TRAM domain AM378_22995 ad3721f255ff9f5ff7073bdf7b7ca69f 449 TIGRFAM TIGR00479 rumA: 23S rRNA (uracil-5-)-methyltransferase RumA 27 433 1.9E-139 T 15-10-2018 AM378_07790 e62d5b4f4c5054ca34f2887868f7cc82 296 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 113 295 1.6E-23 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AM378_07790 e62d5b4f4c5054ca34f2887868f7cc82 296 Gene3D G3DSA:1.10.3720.10 85 293 2.7E-18 T 15-10-2018 IPR035906 MetI-like superfamily AM378_07790 e62d5b4f4c5054ca34f2887868f7cc82 296 SUPERFAMILY SSF161098 90 277 7.19E-22 T 15-10-2018 IPR035906 MetI-like superfamily AM378_07790 e62d5b4f4c5054ca34f2887868f7cc82 296 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 14 66 2.8E-9 T 15-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain AM378_07795 2c6732303dd372fd7f8a957875d80050 330 SUPERFAMILY SSF52540 3 266 1.98E-53 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_07795 2c6732303dd372fd7f8a957875d80050 330 SMART SM00382 32 235 5.7E-7 T 15-10-2018 IPR003593 AAA+ ATPase domain AM378_07795 2c6732303dd372fd7f8a957875d80050 330 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 237 323 5.3E-20 T 15-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AM378_07795 2c6732303dd372fd7f8a957875d80050 330 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 238 305 1.3E-16 T 15-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AM378_07795 2c6732303dd372fd7f8a957875d80050 330 Gene3D G3DSA:3.40.50.300 2 330 1.5E-78 T 15-10-2018 AM378_07795 2c6732303dd372fd7f8a957875d80050 330 Pfam PF00005 ABC transporter 24 187 1.9E-27 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM378_24070 24e052c5f9e9b782a2fd4196120db952 593 SUPERFAMILY SSF52540 322 555 3.98E-63 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_24070 24e052c5f9e9b782a2fd4196120db952 593 SMART SM00382 356 550 1.4E-16 T 15-10-2018 IPR003593 AAA+ ATPase domain AM378_24070 24e052c5f9e9b782a2fd4196120db952 593 Gene3D G3DSA:1.20.1560.10 8 315 9.9E-35 T 15-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 AM378_24070 24e052c5f9e9b782a2fd4196120db952 593 Pfam PF00005 ABC transporter 347 494 7.0E-30 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM378_24070 24e052c5f9e9b782a2fd4196120db952 593 SUPERFAMILY SSF90123 10 316 2.35E-42 T 15-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 AM378_24070 24e052c5f9e9b782a2fd4196120db952 593 TIGRFAM TIGR01842 type_I_sec_PrtD: type I secretion system ATPase 14 556 7.2E-230 T 15-10-2018 IPR010128 ATPase, type I secretion system, PrtD GO:0005524|GO:0008565|GO:0016021|GO:0030253|GO:0030256 AM378_24070 24e052c5f9e9b782a2fd4196120db952 593 Gene3D G3DSA:3.40.50.300 323 560 2.1E-70 T 15-10-2018 AM378_24070 24e052c5f9e9b782a2fd4196120db952 593 Pfam PF00664 ABC transporter transmembrane region 24 281 9.5E-13 T 15-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 AM378_24070 24e052c5f9e9b782a2fd4196120db952 593 ProSitePatterns PS00211 ABC transporters family signature. 467 481 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM378_21350 964bbbaec811fb328de8109f8509c2f3 895 Gene3D G3DSA:3.30.56.50 3 51 1.3E-27 T 15-10-2018 AM378_21350 964bbbaec811fb328de8109f8509c2f3 895 ProSitePatterns PS01176 Initiation factor 2 signature. 845 867 - T 15-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 AM378_21350 964bbbaec811fb328de8109f8509c2f3 895 Hamap MF_00100_B Translation initiation factor IF-2 [infB]. 4 892 17.61 T 15-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 AM378_21350 964bbbaec811fb328de8109f8509c2f3 895 SUPERFAMILY SSF50447 568 649 9.03E-23 T 15-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily AM378_21350 964bbbaec811fb328de8109f8509c2f3 895 SUPERFAMILY SSF52540 394 562 2.19E-52 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_21350 964bbbaec811fb328de8109f8509c2f3 895 Gene3D G3DSA:3.40.50.10050 688 795 9.5E-37 T 15-10-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily AM378_21350 964bbbaec811fb328de8109f8509c2f3 895 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 398 553 7.8E-33 T 15-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 AM378_21350 964bbbaec811fb328de8109f8509c2f3 895 Pfam PF00009 Elongation factor Tu GTP binding domain 399 555 3.3E-35 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM378_21350 964bbbaec811fb328de8109f8509c2f3 895 SUPERFAMILY SSF50447 795 892 2.95E-34 T 15-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily AM378_21350 964bbbaec811fb328de8109f8509c2f3 895 Pfam PF08364 Bacterial translation initiation factor IF-2 associated region 58 96 3.0E-16 T 15-10-2018 IPR013575 Initiation factor 2 associated domain, bacterial AM378_21350 964bbbaec811fb328de8109f8509c2f3 895 SUPERFAMILY SSF52156 672 801 1.44E-37 T 15-10-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily AM378_21350 964bbbaec811fb328de8109f8509c2f3 895 Pfam PF11987 Translation-initiation factor 2 679 784 4.8E-36 T 15-10-2018 IPR023115 Translation initiation factor IF- 2, domain 3 AM378_21350 964bbbaec811fb328de8109f8509c2f3 895 Gene3D G3DSA:2.40.30.10 566 684 2.9E-39 T 15-10-2018 AM378_21350 964bbbaec811fb328de8109f8509c2f3 895 SUPERFAMILY SSF46955 4 51 1.39E-13 T 15-10-2018 IPR009061 Putative DNA-binding domain superfamily AM378_21350 964bbbaec811fb328de8109f8509c2f3 895 TIGRFAM TIGR00487 IF-2: translation initiation factor IF-2 311 894 1.1E-294 T 15-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 AM378_21350 964bbbaec811fb328de8109f8509c2f3 895 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 319 369 1.5E-14 T 15-10-2018 IPR006847 Translation initiation factor IF-2, N-terminal AM378_21350 964bbbaec811fb328de8109f8509c2f3 895 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 4 52 1.7E-8 T 15-10-2018 IPR006847 Translation initiation factor IF-2, N-terminal AM378_21350 964bbbaec811fb328de8109f8509c2f3 895 Gene3D G3DSA:3.40.50.300 392 565 3.1E-73 T 15-10-2018 AM378_21350 964bbbaec811fb328de8109f8509c2f3 895 Gene3D G3DSA:2.40.30.10 796 893 1.9E-34 T 15-10-2018 AM378_14450 961c9bca1a42fe98daac7ad0c5f8535d 417 SUPERFAMILY SSF53187 189 408 1.88E-53 T 15-10-2018 AM378_14450 961c9bca1a42fe98daac7ad0c5f8535d 417 SMART SM00646 251 405 4.7E-66 T 15-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 AM378_14450 961c9bca1a42fe98daac7ad0c5f8535d 417 Pfam PF11741 AMIN domain 39 142 2.2E-26 T 15-10-2018 IPR021731 AMIN domain AM378_14450 961c9bca1a42fe98daac7ad0c5f8535d 417 Gene3D G3DSA:3.40.630.40 176 417 1.1E-91 T 15-10-2018 AM378_14450 961c9bca1a42fe98daac7ad0c5f8535d 417 Gene3D G3DSA:2.60.40.3500 25 145 6.6E-35 T 15-10-2018 AM378_14450 961c9bca1a42fe98daac7ad0c5f8535d 417 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 191 405 3.3E-50 T 15-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 AM378_21290 5756a20ed70985ff3f71863a21b05808 477 SUPERFAMILY SSF56601 23 473 2.46E-102 T 15-10-2018 IPR012338 Beta-lactamase/transpeptidase-like AM378_21290 5756a20ed70985ff3f71863a21b05808 477 Pfam PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family 22 468 1.3E-165 T 15-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AM378_21290 5756a20ed70985ff3f71863a21b05808 477 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 345 359 5.6E-38 T 15-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AM378_21290 5756a20ed70985ff3f71863a21b05808 477 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 286 308 5.6E-38 T 15-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AM378_21290 5756a20ed70985ff3f71863a21b05808 477 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 424 437 5.6E-38 T 15-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AM378_21290 5756a20ed70985ff3f71863a21b05808 477 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 58 77 5.6E-38 T 15-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AM378_21290 5756a20ed70985ff3f71863a21b05808 477 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 360 374 5.6E-38 T 15-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AM378_21290 5756a20ed70985ff3f71863a21b05808 477 Gene3D G3DSA:3.40.710.10 244 477 3.7E-66 T 15-10-2018 AM378_21290 5756a20ed70985ff3f71863a21b05808 477 Gene3D G3DSA:3.50.80.20 82 181 1.8E-22 T 15-10-2018 AM378_21290 5756a20ed70985ff3f71863a21b05808 477 TIGRFAM TIGR00666 PBP4: D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 46 447 2.8E-169 T 15-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AM378_21305 402fa988f18c8d25504047927e9e8aa9 209 TIGRFAM TIGR00438 rrmJ: ribosomal RNA large subunit methyltransferase J 20 206 6.0E-96 T 15-10-2018 IPR004512 Ribosomal RNA methyltransferase E, gammaproteobacteria GO:0006364|GO:0016436 AM378_21305 402fa988f18c8d25504047927e9e8aa9 209 Gene3D G3DSA:3.40.50.150 30 208 5.1E-60 T 15-10-2018 AM378_21305 402fa988f18c8d25504047927e9e8aa9 209 Pfam PF01728 FtsJ-like methyltransferase 31 206 4.7E-57 T 15-10-2018 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 AM378_21305 402fa988f18c8d25504047927e9e8aa9 209 Hamap MF_01547 Ribosomal RNA large subunit methyltransferase E [rlmE]. 15 208 27.803 T 15-10-2018 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 AM378_21305 402fa988f18c8d25504047927e9e8aa9 209 PIRSF PIRSF005461 1 209 7.6E-83 T 15-10-2018 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 AM378_21305 402fa988f18c8d25504047927e9e8aa9 209 SUPERFAMILY SSF53335 31 207 4.1E-42 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM378_09680 b593d9b091be177ca6ace2a6a710ccb1 549 Pfam PF00460 Flagella basal body rod protein 6 35 7.5E-9 T 15-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 AM378_09680 b593d9b091be177ca6ace2a6a710ccb1 549 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 488 548 7.0E-9 T 15-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain AM378_09680 b593d9b091be177ca6ace2a6a710ccb1 549 TIGRFAM TIGR02492 flgK_ends: flagellar hook-associated protein FlgK 4 337 1.2E-79 T 15-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 AM378_09680 b593d9b091be177ca6ace2a6a710ccb1 549 PRINTS PR01005 Flagellar hook-associated protein signature 443 462 2.4E-75 T 15-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 AM378_09680 b593d9b091be177ca6ace2a6a710ccb1 549 PRINTS PR01005 Flagellar hook-associated protein signature 124 144 2.4E-75 T 15-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 AM378_09680 b593d9b091be177ca6ace2a6a710ccb1 549 PRINTS PR01005 Flagellar hook-associated protein signature 157 181 2.4E-75 T 15-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 AM378_09680 b593d9b091be177ca6ace2a6a710ccb1 549 PRINTS PR01005 Flagellar hook-associated protein signature 259 281 2.4E-75 T 15-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 AM378_09680 b593d9b091be177ca6ace2a6a710ccb1 549 PRINTS PR01005 Flagellar hook-associated protein signature 12 35 2.4E-75 T 15-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 AM378_09680 b593d9b091be177ca6ace2a6a710ccb1 549 PRINTS PR01005 Flagellar hook-associated protein signature 50 72 2.4E-75 T 15-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 AM378_09680 b593d9b091be177ca6ace2a6a710ccb1 549 PRINTS PR01005 Flagellar hook-associated protein signature 216 234 2.4E-75 T 15-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 AM378_09680 b593d9b091be177ca6ace2a6a710ccb1 549 PRINTS PR01005 Flagellar hook-associated protein signature 468 489 2.4E-75 T 15-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 AM378_09680 b593d9b091be177ca6ace2a6a710ccb1 549 PRINTS PR01005 Flagellar hook-associated protein signature 359 381 2.4E-75 T 15-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 AM378_09680 b593d9b091be177ca6ace2a6a710ccb1 549 PRINTS PR01005 Flagellar hook-associated protein signature 515 539 2.4E-75 T 15-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 AM378_09680 b593d9b091be177ca6ace2a6a710ccb1 549 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 12 32 - T 15-10-2018 IPR019776 Flagellar basal body rod protein, conserved site AM378_09680 b593d9b091be177ca6ace2a6a710ccb1 549 SUPERFAMILY SSF64518 115 547 1.1E-49 T 15-10-2018 AM378_13665 b7ab18d050f4a582770ebc9aa4637f3d 227 SUPERFAMILY SSF52141 5 220 2.18E-97 T 15-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AM378_13665 b7ab18d050f4a582770ebc9aa4637f3d 227 SMART SM00987 49 210 4.0E-41 T 15-10-2018 AM378_13665 b7ab18d050f4a582770ebc9aa4637f3d 227 Hamap MF_00148 Uracil-DNA glycosylase [ung]. 4 221 40.665 T 15-10-2018 IPR002043 Uracil-DNA glycosylase family 1 GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AM378_13665 b7ab18d050f4a582770ebc9aa4637f3d 227 ProSitePatterns PS00130 Uracil-DNA glycosylase signature. 57 66 - T 15-10-2018 IPR018085 Uracil-DNA glycosylase, active site GO:0006281|GO:0016799 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AM378_13665 b7ab18d050f4a582770ebc9aa4637f3d 227 Gene3D G3DSA:3.40.470.10 1 227 5.7E-107 T 15-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AM378_13665 b7ab18d050f4a582770ebc9aa4637f3d 227 Pfam PF03167 Uracil DNA glycosylase superfamily 54 209 6.2E-25 T 15-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AM378_13665 b7ab18d050f4a582770ebc9aa4637f3d 227 SMART SM00986 49 210 4.0E-41 T 15-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AM378_13665 b7ab18d050f4a582770ebc9aa4637f3d 227 TIGRFAM TIGR00628 ung: uracil-DNA glycosylase 6 214 5.2E-89 T 15-10-2018 IPR002043 Uracil-DNA glycosylase family 1 GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AM378_15000 dced2b1bccdb6b584ba3d3bfd473f057 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 136 144 1.4E-11 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_15000 dced2b1bccdb6b584ba3d3bfd473f057 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 157 176 1.4E-11 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_15000 dced2b1bccdb6b584ba3d3bfd473f057 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 1.4E-11 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_15000 dced2b1bccdb6b584ba3d3bfd473f057 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 2.6E-40 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_15000 dced2b1bccdb6b584ba3d3bfd473f057 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 157 176 2.6E-40 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_15000 dced2b1bccdb6b584ba3d3bfd473f057 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 178 195 2.6E-40 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_15000 dced2b1bccdb6b584ba3d3bfd473f057 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 2.6E-40 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_15000 dced2b1bccdb6b584ba3d3bfd473f057 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 2.6E-40 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_15000 dced2b1bccdb6b584ba3d3bfd473f057 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 212 232 2.6E-40 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_15000 dced2b1bccdb6b584ba3d3bfd473f057 248 Gene3D G3DSA:3.40.50.720 1 248 8.0E-80 T 15-10-2018 AM378_15000 dced2b1bccdb6b584ba3d3bfd473f057 248 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 144 172 - T 15-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AM378_15000 dced2b1bccdb6b584ba3d3bfd473f057 248 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 9 247 1.5E-58 T 15-10-2018 AM378_15000 dced2b1bccdb6b584ba3d3bfd473f057 248 SUPERFAMILY SSF51735 3 247 7.3E-75 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily AM378_01045 47e7a269ee7eff6966f4bb267bac6d14 290 Pfam PF00549 CoA-ligase 151 271 7.2E-21 T 15-10-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AM378_01045 47e7a269ee7eff6966f4bb267bac6d14 290 PIRSF PIRSF001553 1 290 1.3E-135 T 15-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 AM378_01045 47e7a269ee7eff6966f4bb267bac6d14 290 SUPERFAMILY SSF51735 1 122 4.6E-44 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily AM378_01045 47e7a269ee7eff6966f4bb267bac6d14 290 Pfam PF02629 CoA binding domain 6 99 1.6E-31 T 15-10-2018 IPR003781 CoA-binding GO:0048037 AM378_01045 47e7a269ee7eff6966f4bb267bac6d14 290 TIGRFAM TIGR01019 sucCoAalpha: succinate-CoA ligase, alpha subunit 3 288 1.1E-146 T 15-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 AM378_01045 47e7a269ee7eff6966f4bb267bac6d14 290 SUPERFAMILY SSF52210 123 288 1.7E-57 T 15-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AM378_01045 47e7a269ee7eff6966f4bb267bac6d14 290 Gene3D G3DSA:3.40.50.261 124 289 2.0E-77 T 15-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AM378_01045 47e7a269ee7eff6966f4bb267bac6d14 290 Hamap MF_01988 Succinate--CoA ligase [ADP-forming] subunit alpha [sucD]. 1 288 43.495 T 15-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 AM378_01045 47e7a269ee7eff6966f4bb267bac6d14 290 PRINTS PR01798 Succinyl-CoA synthase signature 82 99 1.2E-39 T 15-10-2018 AM378_01045 47e7a269ee7eff6966f4bb267bac6d14 290 PRINTS PR01798 Succinyl-CoA synthase signature 208 221 1.2E-39 T 15-10-2018 AM378_01045 47e7a269ee7eff6966f4bb267bac6d14 290 PRINTS PR01798 Succinyl-CoA synthase signature 177 195 1.2E-39 T 15-10-2018 AM378_01045 47e7a269ee7eff6966f4bb267bac6d14 290 PRINTS PR01798 Succinyl-CoA synthase signature 240 257 1.2E-39 T 15-10-2018 AM378_01045 47e7a269ee7eff6966f4bb267bac6d14 290 ProSitePatterns PS01216 ATP-citrate lyase / succinyl-CoA ligases family signature 1. 152 181 - T 15-10-2018 IPR033847 ATP-citrate lyase/succinyl-CoA ligase, conserved site AM378_01045 47e7a269ee7eff6966f4bb267bac6d14 290 Gene3D G3DSA:3.40.50.720 1 123 1.4E-51 T 15-10-2018 AM378_01045 47e7a269ee7eff6966f4bb267bac6d14 290 SMART SM00881 4 100 1.2E-37 T 15-10-2018 IPR003781 CoA-binding GO:0048037 AM378_01045 47e7a269ee7eff6966f4bb267bac6d14 290 ProSitePatterns PS00399 ATP-citrate lyase / succinyl-CoA ligases family active site. 236 249 - T 15-10-2018 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site AM378_06475 bafba980ca3098b48a2c2a3612082f7c 321 SUPERFAMILY SSF53590 5 302 3.92E-80 T 15-10-2018 IPR036452 Ribonucleoside hydrolase-like AM378_06475 bafba980ca3098b48a2c2a3612082f7c 321 Pfam PF01156 Inosine-uridine preferring nucleoside hydrolase 7 305 1.4E-75 T 15-10-2018 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain AM378_06475 bafba980ca3098b48a2c2a3612082f7c 321 Gene3D G3DSA:3.90.245.10 1 319 5.9E-89 T 15-10-2018 IPR036452 Ribonucleoside hydrolase-like AM378_09340 fbcd488ee16aabc3443445dc59046f5e 302 PIRSF PIRSF020481 1 302 3.6E-123 T 15-10-2018 IPR014507 Baseplate assembly protein J, predicted AM378_09340 fbcd488ee16aabc3443445dc59046f5e 302 Pfam PF04865 Baseplate J-like protein 118 262 9.7E-24 T 15-10-2018 IPR006949 Baseplate protein J-like AM378_08510 a4e72fdd6ac3d8bd7d8fe86743b191f5 357 PRINTS PR00992 Alanine racemase signature 286 303 7.9E-70 T 15-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AM378_08510 a4e72fdd6ac3d8bd7d8fe86743b191f5 357 PRINTS PR00992 Alanine racemase signature 61 79 7.9E-70 T 15-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AM378_08510 a4e72fdd6ac3d8bd7d8fe86743b191f5 357 PRINTS PR00992 Alanine racemase signature 338 351 7.9E-70 T 15-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AM378_08510 a4e72fdd6ac3d8bd7d8fe86743b191f5 357 PRINTS PR00992 Alanine racemase signature 155 166 7.9E-70 T 15-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AM378_08510 a4e72fdd6ac3d8bd7d8fe86743b191f5 357 PRINTS PR00992 Alanine racemase signature 27 43 7.9E-70 T 15-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AM378_08510 a4e72fdd6ac3d8bd7d8fe86743b191f5 357 PRINTS PR00992 Alanine racemase signature 248 263 7.9E-70 T 15-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AM378_08510 a4e72fdd6ac3d8bd7d8fe86743b191f5 357 PRINTS PR00992 Alanine racemase signature 190 217 7.9E-70 T 15-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AM378_08510 a4e72fdd6ac3d8bd7d8fe86743b191f5 357 PRINTS PR00992 Alanine racemase signature 265 280 7.9E-70 T 15-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AM378_08510 a4e72fdd6ac3d8bd7d8fe86743b191f5 357 PRINTS PR00992 Alanine racemase signature 121 133 7.9E-70 T 15-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AM378_08510 a4e72fdd6ac3d8bd7d8fe86743b191f5 357 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 32 42 - T 15-10-2018 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AM378_08510 a4e72fdd6ac3d8bd7d8fe86743b191f5 357 Pfam PF00842 Alanine racemase, C-terminal domain 232 352 2.9E-38 T 15-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AM378_08510 a4e72fdd6ac3d8bd7d8fe86743b191f5 357 SMART SM01005 232 356 5.8E-60 T 15-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AM378_08510 a4e72fdd6ac3d8bd7d8fe86743b191f5 357 SUPERFAMILY SSF51419 10 233 1.44E-64 T 15-10-2018 IPR029066 PLP-binding barrel AM378_08510 a4e72fdd6ac3d8bd7d8fe86743b191f5 357 SUPERFAMILY SSF50621 227 353 9.42E-42 T 15-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 AM378_08510 a4e72fdd6ac3d8bd7d8fe86743b191f5 357 Hamap MF_01201 Alanine racemase. 2 356 32.412 T 15-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AM378_08510 a4e72fdd6ac3d8bd7d8fe86743b191f5 357 Pfam PF01168 Alanine racemase, N-terminal domain 10 217 3.9E-68 T 15-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AM378_08510 a4e72fdd6ac3d8bd7d8fe86743b191f5 357 Gene3D G3DSA:2.40.37.10 216 351 2.6E-112 T 15-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 AM378_08510 a4e72fdd6ac3d8bd7d8fe86743b191f5 357 TIGRFAM TIGR00492 alr: alanine racemase 4 353 2.5E-116 T 15-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AM378_08510 a4e72fdd6ac3d8bd7d8fe86743b191f5 357 Gene3D G3DSA:3.20.20.10 11 215 2.6E-112 T 15-10-2018 IPR029066 PLP-binding barrel AM378_02170 567b2e6926673f61a2e9ac20b47abfd7 209 PIRSF PIRSF010372 1 208 6.3E-63 T 15-10-2018 IPR007396 Transcriptional regulator PAI 2-type AM378_02170 567b2e6926673f61a2e9ac20b47abfd7 209 SUPERFAMILY SSF50475 11 192 1.57E-37 T 15-10-2018 AM378_02170 567b2e6926673f61a2e9ac20b47abfd7 209 Pfam PF04299 Putative FMN-binding domain 1 167 4.3E-58 T 15-10-2018 IPR007396 Transcriptional regulator PAI 2-type AM378_02170 567b2e6926673f61a2e9ac20b47abfd7 209 Gene3D G3DSA:2.30.110.10 2 209 2.3E-68 T 15-10-2018 IPR012349 FMN-binding split barrel GO:0048037 AM378_17680 ce8ee19ae448156b6d73b46a6d3a4a0a 77 Pfam PF06794 Uncharacterised protein family (UPF0270) 2 68 1.1E-34 T 15-10-2018 IPR010648 Uncharacterised protein family UPF0270 AM378_17680 ce8ee19ae448156b6d73b46a6d3a4a0a 77 PIRSF PIRSF006169 1 76 1.0E-37 T 15-10-2018 IPR010648 Uncharacterised protein family UPF0270 AM378_17680 ce8ee19ae448156b6d73b46a6d3a4a0a 77 Hamap MF_00690 UPF0270 protein YheU [yheU]. 1 70 24.549 T 15-10-2018 IPR010648 Uncharacterised protein family UPF0270 AM378_17680 ce8ee19ae448156b6d73b46a6d3a4a0a 77 Gene3D G3DSA:1.10.10.610 1 75 5.8E-30 T 15-10-2018 IPR036685 YehU-like superfamily AM378_17680 ce8ee19ae448156b6d73b46a6d3a4a0a 77 ProDom PD026997 UPF0270 YHEU SO0879 3D-STRUCTURE LYASE PLU0398 YPO0179/Y3960/YP0178 ENOLASE HD0737 PSPTO1630 1 67 6.0E-27 T 15-10-2018 IPR010648 Uncharacterised protein family UPF0270 AM378_17680 ce8ee19ae448156b6d73b46a6d3a4a0a 77 SUPERFAMILY SSF118001 1 72 1.31E-29 T 15-10-2018 IPR036685 YehU-like superfamily AM378_15095 8cd23e7ffc722f4cc4441f4ffab4f2dc 517 SUPERFAMILY SSF52540 277 488 1.95E-37 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_15095 8cd23e7ffc722f4cc4441f4ffab4f2dc 517 ProSitePatterns PS00211 ABC transporters family signature. 403 417 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM378_15095 8cd23e7ffc722f4cc4441f4ffab4f2dc 517 Gene3D G3DSA:3.40.50.300 275 512 2.0E-35 T 15-10-2018 AM378_15095 8cd23e7ffc722f4cc4441f4ffab4f2dc 517 Pfam PF00005 ABC transporter 277 431 4.3E-14 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM378_15095 8cd23e7ffc722f4cc4441f4ffab4f2dc 517 SMART SM00382 35 225 4.7E-10 T 15-10-2018 IPR003593 AAA+ ATPase domain AM378_15095 8cd23e7ffc722f4cc4441f4ffab4f2dc 517 SMART SM00382 284 479 1.2 T 15-10-2018 IPR003593 AAA+ ATPase domain AM378_15095 8cd23e7ffc722f4cc4441f4ffab4f2dc 517 Pfam PF00005 ABC transporter 27 177 3.7E-30 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM378_15095 8cd23e7ffc722f4cc4441f4ffab4f2dc 517 SUPERFAMILY SSF52540 9 234 5.43E-57 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_15095 8cd23e7ffc722f4cc4441f4ffab4f2dc 517 Gene3D G3DSA:3.40.50.300 1 257 7.5E-60 T 15-10-2018 AM378_20355 be435dc998116034ac72ef0e2abc2a0f 233 PIRSF PIRSF039137 1 233 1.3E-103 T 15-10-2018 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein GO:0015658|GO:0015803 AM378_20355 be435dc998116034ac72ef0e2abc2a0f 233 SMART SM00382 26 212 2.8E-5 T 15-10-2018 IPR003593 AAA+ ATPase domain AM378_20355 be435dc998116034ac72ef0e2abc2a0f 233 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM378_20355 be435dc998116034ac72ef0e2abc2a0f 233 Pfam PF00005 ABC transporter 17 161 2.0E-33 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM378_20355 be435dc998116034ac72ef0e2abc2a0f 233 SUPERFAMILY SSF52540 2 230 1.38E-60 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_20355 be435dc998116034ac72ef0e2abc2a0f 233 Gene3D G3DSA:3.40.50.300 1 233 1.9E-65 T 15-10-2018 AM378_11225 d09d116d6f1e1e95fb72d72042b49394 355 Pfam PF13515 Fusaric acid resistance protein-like 33 158 1.9E-14 T 15-10-2018 AM378_03845 412abd34e87fa9bbb236f7fc39da8a8b 156 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 14 25 3.0E-11 T 15-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM378_03845 412abd34e87fa9bbb236f7fc39da8a8b 156 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 48 68 3.0E-11 T 15-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM378_03845 412abd34e87fa9bbb236f7fc39da8a8b 156 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 25 38 3.0E-11 T 15-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM378_03845 412abd34e87fa9bbb236f7fc39da8a8b 156 SUPERFAMILY SSF46955 13 135 4.76E-27 T 15-10-2018 IPR009061 Putative DNA-binding domain superfamily AM378_03845 412abd34e87fa9bbb236f7fc39da8a8b 156 Pfam PF09278 MerR, DNA binding 56 120 5.4E-14 T 15-10-2018 IPR015358 Transcription regulator MerR, DNA binding AM378_03845 412abd34e87fa9bbb236f7fc39da8a8b 156 Gene3D G3DSA:1.10.1660.10 4 136 7.6E-31 T 15-10-2018 AM378_03845 412abd34e87fa9bbb236f7fc39da8a8b 156 Pfam PF00376 MerR family regulatory protein 14 50 5.1E-14 T 15-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM378_03845 412abd34e87fa9bbb236f7fc39da8a8b 156 SMART SM00422 13 81 1.0E-20 T 15-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM378_03845 412abd34e87fa9bbb236f7fc39da8a8b 156 ProSitePatterns PS00552 MerR-type HTH domain signature. 16 38 - T 15-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM378_03845 412abd34e87fa9bbb236f7fc39da8a8b 156 TIGRFAM TIGR01950 SoxR: redox-sensitive transcriptional activator SoxR 13 152 2.6E-63 T 15-10-2018 IPR010211 Redox-sensitive transcriptional activator SoxR GO:0003677|GO:0006355|GO:0006979|GO:0051537 AM378_18260 337aa47dff9beb00e0a0a780ec04383d 497 Pfam PF00155 Aminotransferase class I and II 164 461 7.0E-18 T 15-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AM378_18260 337aa47dff9beb00e0a0a780ec04383d 497 Pfam PF00392 Bacterial regulatory proteins, gntR family 24 86 9.5E-15 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM378_18260 337aa47dff9beb00e0a0a780ec04383d 497 Gene3D G3DSA:3.40.640.10 125 484 3.9E-108 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AM378_18260 337aa47dff9beb00e0a0a780ec04383d 497 Gene3D G3DSA:1.10.10.10 22 124 3.0E-19 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_18260 337aa47dff9beb00e0a0a780ec04383d 497 SUPERFAMILY SSF46785 22 90 1.63E-18 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM378_18260 337aa47dff9beb00e0a0a780ec04383d 497 SMART SM00345 27 86 7.7E-17 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM378_18260 337aa47dff9beb00e0a0a780ec04383d 497 SUPERFAMILY SSF53383 117 489 6.49E-85 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM378_18260 337aa47dff9beb00e0a0a780ec04383d 497 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 60 76 2.4E-5 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM378_18260 337aa47dff9beb00e0a0a780ec04383d 497 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 46 60 2.4E-5 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM378_02410 2bf8154b906b8e7fbe5da7be59d9b1de 200 Pfam PF00440 Bacterial regulatory proteins, tetR family 14 59 4.9E-13 T 15-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM378_02410 2bf8154b906b8e7fbe5da7be59d9b1de 200 ProSitePatterns PS01081 TetR-type HTH domain signature. 26 57 - T 15-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site AM378_02410 2bf8154b906b8e7fbe5da7be59d9b1de 200 TIGRFAM TIGR03384 betaine_BetI: transcriptional repressor BetI 2 192 3.1E-80 T 15-10-2018 IPR017757 Transcriptional repressor BetI AM378_02410 2bf8154b906b8e7fbe5da7be59d9b1de 200 Pfam PF13977 BetI-type transcriptional repressor, C-terminal 84 189 2.6E-33 T 15-10-2018 IPR039538 BetI-type transcriptional repressor, C-terminal AM378_02410 2bf8154b906b8e7fbe5da7be59d9b1de 200 Hamap MF_00768 HTH-type transcriptional regulator BetI [betI]. 1 198 109.553 T 15-10-2018 IPR017757 Transcriptional repressor BetI AM378_02410 2bf8154b906b8e7fbe5da7be59d9b1de 200 SUPERFAMILY SSF46689 5 79 1.9E-16 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AM378_02410 2bf8154b906b8e7fbe5da7be59d9b1de 200 Gene3D G3DSA:1.10.357.10 6 195 1.8E-45 T 15-10-2018 AM378_02410 2bf8154b906b8e7fbe5da7be59d9b1de 200 SUPERFAMILY SSF48498 81 195 4.56E-20 T 15-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AM378_02410 2bf8154b906b8e7fbe5da7be59d9b1de 200 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 35 58 1.1E-5 T 15-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM378_02410 2bf8154b906b8e7fbe5da7be59d9b1de 200 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 14 27 1.1E-5 T 15-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM378_04150 e6c04a1ab1e16e263af3768d6f8a4135 376 Hamap MF_01066 Glucans biosynthesis protein C [mdoC]. 1 376 36.857 T 15-10-2018 IPR023723 Glucan biosynthesis protein C GO:0016741 AM378_04150 e6c04a1ab1e16e263af3768d6f8a4135 376 Pfam PF01757 Acyltransferase family 11 358 7.2E-31 T 15-10-2018 IPR002656 Acyltransferase 3 GO:0016747 AM378_16645 74f162b799941a7092ff396862bf3458 179 Pfam PF03968 OstA-like protein 38 148 7.6E-30 T 15-10-2018 IPR005653 Organic solvent tolerance-like, N-terminal AM378_16645 74f162b799941a7092ff396862bf3458 179 TIGRFAM TIGR03002 outer_YhbN_LptA: lipopolysaccharide transport periplasmic protein LptA 27 166 3.5E-50 T 15-10-2018 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 AM378_16645 74f162b799941a7092ff396862bf3458 179 Hamap MF_01914 Lipopolysaccharide export system protein LptA [lptA]. 7 167 25.733 T 15-10-2018 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 AM378_16645 74f162b799941a7092ff396862bf3458 179 Gene3D G3DSA:2.60.450.10 27 164 6.3E-51 T 15-10-2018 AM378_19255 43a4c765774a91a8c8416e7d9f3649f9 146 SUPERFAMILY SSF52218 1 146 2.19E-41 T 15-10-2018 IPR029039 Flavoprotein-like superfamily AM378_19255 43a4c765774a91a8c8416e7d9f3649f9 146 Gene3D G3DSA:3.40.50.360 1 146 1.4E-49 T 15-10-2018 IPR029039 Flavoprotein-like superfamily AM378_19255 43a4c765774a91a8c8416e7d9f3649f9 146 PRINTS PR00369 Flavodoxin signature 106 125 8.9E-7 T 15-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 AM378_19255 43a4c765774a91a8c8416e7d9f3649f9 146 PRINTS PR00369 Flavodoxin signature 82 92 8.9E-7 T 15-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 AM378_19255 43a4c765774a91a8c8416e7d9f3649f9 146 PRINTS PR00369 Flavodoxin signature 5 18 8.9E-7 T 15-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 AM378_19255 43a4c765774a91a8c8416e7d9f3649f9 146 PRINTS PR00369 Flavodoxin signature 51 62 8.9E-7 T 15-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 AM378_19255 43a4c765774a91a8c8416e7d9f3649f9 146 Pfam PF00258 Flavodoxin 7 138 3.6E-26 T 15-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 AM378_18005 33d06c8a372b6dcb06be322cf1bbbe72 465 Pfam PF03611 PTS system sugar-specific permease component 15 411 4.7E-122 T 15-10-2018 IPR004703 Phosphotransferase system, sugar-specific permease component GO:0009401|GO:0016021 AM378_12490 035998d22500ee9b133d10fd1f80bd62 351 Pfam PF01032 FecCD transport family 35 344 1.9E-87 T 15-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 AM378_12490 035998d22500ee9b133d10fd1f80bd62 351 Gene3D G3DSA:1.10.3470.10 25 350 2.1E-90 T 15-10-2018 IPR037294 ABC transporter, BtuC-like AM378_12490 035998d22500ee9b133d10fd1f80bd62 351 SUPERFAMILY SSF81345 24 344 7.06E-79 T 15-10-2018 IPR037294 ABC transporter, BtuC-like AM378_07085 9dc694a8dbc424748e65d382a73ca91f 420 SUPERFAMILY SSF53474 176 415 2.24E-44 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold AM378_07085 9dc694a8dbc424748e65d382a73ca91f 420 SUPERFAMILY SSF81296 11 161 7.14E-41 T 15-10-2018 IPR014756 Immunoglobulin E-set AM378_07085 9dc694a8dbc424748e65d382a73ca91f 420 Pfam PF11806 Domain of unknown function (DUF3327) 38 167 9.0E-38 T 15-10-2018 IPR021764 Enterochelin esterase, N-terminal GO:0005506|GO:0005737|GO:0006826|GO:0008849 AM378_07085 9dc694a8dbc424748e65d382a73ca91f 420 Gene3D G3DSA:2.60.40.10 3 155 4.0E-49 T 15-10-2018 IPR013783 Immunoglobulin-like fold AM378_07085 9dc694a8dbc424748e65d382a73ca91f 420 Gene3D G3DSA:3.40.50.1820 158 419 4.2E-65 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold AM378_07085 9dc694a8dbc424748e65d382a73ca91f 420 Pfam PF00756 Putative esterase 186 414 3.7E-34 T 15-10-2018 IPR000801 Putative esterase Reactome: R-HSA-156590 AM378_21205 fff438c9e382a7750567406b7076bc18 176 ProSitePatterns PS00387 Inorganic pyrophosphatase signature. 66 72 - T 15-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 AM378_21205 fff438c9e382a7750567406b7076bc18 176 Gene3D G3DSA:3.90.80.10 2 176 4.4E-70 T 15-10-2018 IPR036649 Inorganic pyrophosphatase superfamily GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 AM378_21205 fff438c9e382a7750567406b7076bc18 176 SUPERFAMILY SSF50324 6 173 7.85E-67 T 15-10-2018 IPR036649 Inorganic pyrophosphatase superfamily GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 AM378_21205 fff438c9e382a7750567406b7076bc18 176 Pfam PF00719 Inorganic pyrophosphatase 18 172 5.4E-55 T 15-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 AM378_21205 fff438c9e382a7750567406b7076bc18 176 Hamap MF_00209 Inorganic pyrophosphatase [ppa]. 14 174 36.994 T 15-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 AM378_08765 3379eaf97a2f090185c13b7b2ebf850c 511 Pfam PF03023 MviN-like protein 28 478 1.4E-155 T 15-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ AM378_08765 3379eaf97a2f090185c13b7b2ebf850c 511 Hamap MF_02078 Probable lipid II flippase MurJ [murJ]. 3 467 20.453 T 15-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ AM378_08765 3379eaf97a2f090185c13b7b2ebf850c 511 PRINTS PR01806 Virulence factor MviN signature 33 52 1.3E-87 T 15-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ AM378_08765 3379eaf97a2f090185c13b7b2ebf850c 511 PRINTS PR01806 Virulence factor MviN signature 357 376 1.3E-87 T 15-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ AM378_08765 3379eaf97a2f090185c13b7b2ebf850c 511 PRINTS PR01806 Virulence factor MviN signature 52 68 1.3E-87 T 15-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ AM378_08765 3379eaf97a2f090185c13b7b2ebf850c 511 PRINTS PR01806 Virulence factor MviN signature 157 178 1.3E-87 T 15-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ AM378_08765 3379eaf97a2f090185c13b7b2ebf850c 511 PRINTS PR01806 Virulence factor MviN signature 259 285 1.3E-87 T 15-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ AM378_08765 3379eaf97a2f090185c13b7b2ebf850c 511 PRINTS PR01806 Virulence factor MviN signature 409 426 1.3E-87 T 15-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ AM378_08765 3379eaf97a2f090185c13b7b2ebf850c 511 PRINTS PR01806 Virulence factor MviN signature 133 157 1.3E-87 T 15-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ AM378_08765 3379eaf97a2f090185c13b7b2ebf850c 511 PIRSF PIRSF002869 1 510 1.1E-178 T 15-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ AM378_08765 3379eaf97a2f090185c13b7b2ebf850c 511 TIGRFAM TIGR01695 murJ_mviN: murein biosynthesis integral membrane protein MurJ 2 502 4.6E-169 T 15-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ AM378_08570 861736d06f22983c3346e92a8d952f16 231 TIGRFAM TIGR01222 minC: septum site-determining protein MinC 6 230 6.5E-74 T 15-10-2018 IPR013033 Septum formation inhibitor MinC GO:0051726|GO:1901891 AM378_08570 861736d06f22983c3346e92a8d952f16 231 Pfam PF05209 Septum formation inhibitor MinC, N-terminal domain 1 102 4.4E-35 T 15-10-2018 IPR007874 Septum formation inhibitor MinC, N-terminal GO:0051302 AM378_08570 861736d06f22983c3346e92a8d952f16 231 Hamap MF_00267 Probable septum site-determining protein MinC [minC]. 5 231 28.903 T 15-10-2018 IPR013033 Septum formation inhibitor MinC GO:0051726|GO:1901891 AM378_08570 861736d06f22983c3346e92a8d952f16 231 Gene3D G3DSA:2.160.20.70 122 231 1.3E-28 T 15-10-2018 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal GO:0000902 AM378_08570 861736d06f22983c3346e92a8d952f16 231 Pfam PF03775 Septum formation inhibitor MinC, C-terminal domain 127 227 1.2E-30 T 15-10-2018 IPR005526 Septum formation inhibitor MinC, C-terminal GO:0000902 AM378_08570 861736d06f22983c3346e92a8d952f16 231 Gene3D G3DSA:3.30.750.120 1 115 9.5E-42 T 15-10-2018 IPR038061 MinC, Proteobacteria, N-terminal domain superfamily AM378_08570 861736d06f22983c3346e92a8d952f16 231 SUPERFAMILY SSF63848 125 230 5.1E-31 T 15-10-2018 IPR036145 Septum formation inhibitor MinC, C-terminal domain superfamily GO:0000902 AM378_22705 7acd493a6699678ed99a3399a356afa8 234 TIGRFAM TIGR01277 thiQ: thiamine ABC transporter, ATP-binding protein 2 210 4.2E-100 T 15-10-2018 IPR005968 Thiamine ABC transporter, ATP-binding protein ThiQ GO:0005524|GO:0016021|GO:0042626|GO:0071934 AM378_22705 7acd493a6699678ed99a3399a356afa8 234 SMART SM00382 24 214 7.2E-20 T 15-10-2018 IPR003593 AAA+ ATPase domain AM378_22705 7acd493a6699678ed99a3399a356afa8 234 Pfam PF00005 ABC transporter 19 157 3.0E-34 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM378_22705 7acd493a6699678ed99a3399a356afa8 234 ProSitePatterns PS00211 ABC transporters family signature. 130 144 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM378_22705 7acd493a6699678ed99a3399a356afa8 234 Gene3D G3DSA:3.40.50.300 1 228 2.4E-64 T 15-10-2018 AM378_22705 7acd493a6699678ed99a3399a356afa8 234 SUPERFAMILY SSF52540 1 222 1.07E-64 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_23115 a8b6c8abf4297dc363dc791cf259ae57 255 Gene3D G3DSA:1.10.3720.10 2 253 1.6E-54 T 15-10-2018 IPR035906 MetI-like superfamily AM378_23115 a8b6c8abf4297dc363dc791cf259ae57 255 SUPERFAMILY SSF161098 14 234 3.14E-41 T 15-10-2018 IPR035906 MetI-like superfamily AM378_23115 a8b6c8abf4297dc363dc791cf259ae57 255 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 64 248 1.6E-22 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AM378_23115 a8b6c8abf4297dc363dc791cf259ae57 255 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 14 93 4.8E-12 T 15-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 AM378_01460 3cb93cc7301fd0c33f716734386421db 250 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 7 188 0.0054 T 15-10-2018 AM378_01460 3cb93cc7301fd0c33f716734386421db 250 SUPERFAMILY SSF51735 5 249 3.94E-75 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily AM378_01460 3cb93cc7301fd0c33f716734386421db 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 178 195 7.7E-45 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_01460 3cb93cc7301fd0c33f716734386421db 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 7.7E-45 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_01460 3cb93cc7301fd0c33f716734386421db 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 7.7E-45 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_01460 3cb93cc7301fd0c33f716734386421db 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 131 147 7.7E-45 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_01460 3cb93cc7301fd0c33f716734386421db 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 211 231 7.7E-45 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_01460 3cb93cc7301fd0c33f716734386421db 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 157 176 7.7E-45 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_01460 3cb93cc7301fd0c33f716734386421db 250 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 144 172 - T 15-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AM378_01460 3cb93cc7301fd0c33f716734386421db 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 157 176 5.9E-12 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_01460 3cb93cc7301fd0c33f716734386421db 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 5.9E-12 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_01460 3cb93cc7301fd0c33f716734386421db 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 137 145 5.9E-12 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_01460 3cb93cc7301fd0c33f716734386421db 250 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 248 4.0E-62 T 15-10-2018 AM378_01460 3cb93cc7301fd0c33f716734386421db 250 Gene3D G3DSA:3.40.50.720 1 249 7.4E-76 T 15-10-2018 AM378_21125 b673f4555ee1360dc0bfcd09f5564eb9 105 TIGRFAM TIGR04418 PriB_gamma: primosomal replication protein PriB 4 100 7.4E-38 T 15-10-2018 IPR023646 Primosomal replication protein PriB GO:0003697|GO:0006260|GO:0030894 AM378_21125 b673f4555ee1360dc0bfcd09f5564eb9 105 Pfam PF00436 Single-strand binding protein family 4 83 3.1E-14 T 15-10-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 AM378_21125 b673f4555ee1360dc0bfcd09f5564eb9 105 Hamap MF_00720 Primosomal replication protein N [priB]. 3 101 24.668 T 15-10-2018 IPR023646 Primosomal replication protein PriB GO:0003697|GO:0006260|GO:0030894 AM378_21125 b673f4555ee1360dc0bfcd09f5564eb9 105 Gene3D G3DSA:2.40.50.140 1 105 2.8E-41 T 15-10-2018 AM378_21125 b673f4555ee1360dc0bfcd09f5564eb9 105 PIRSF PIRSF003135 1 102 3.0E-50 T 15-10-2018 IPR023646 Primosomal replication protein PriB GO:0003697|GO:0006260|GO:0030894 AM378_21125 b673f4555ee1360dc0bfcd09f5564eb9 105 SUPERFAMILY SSF50249 3 104 1.44E-31 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold AM378_05995 320342c54f1904e00f046aaf611950b8 213 ProSitePatterns PS01155 Endonuclease III family signature. 102 131 - T 15-10-2018 IPR004036 Endonuclease III-like, conserved site-2 Reactome: R-HSA-110357 AM378_05995 320342c54f1904e00f046aaf611950b8 213 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 187 203 - T 15-10-2018 IPR004035 Endonuclease III, iron-sulphur binding site Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 AM378_05995 320342c54f1904e00f046aaf611950b8 213 TIGRFAM TIGR01083 nth: endonuclease III 3 194 3.3E-88 T 15-10-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 AM378_05995 320342c54f1904e00f046aaf611950b8 213 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 34 168 1.1E-18 T 15-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 AM378_05995 320342c54f1904e00f046aaf611950b8 213 SMART SM00478 38 185 4.9E-52 T 15-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 AM378_05995 320342c54f1904e00f046aaf611950b8 213 PIRSF PIRSF001435 1 210 1.1E-48 T 15-10-2018 AM378_05995 320342c54f1904e00f046aaf611950b8 213 Gene3D G3DSA:1.10.1670.10 11 203 3.0E-77 T 15-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 AM378_05995 320342c54f1904e00f046aaf611950b8 213 Pfam PF10576 Iron-sulfur binding domain of endonuclease III 187 203 1.1E-4 T 15-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 AM378_05995 320342c54f1904e00f046aaf611950b8 213 SUPERFAMILY SSF48150 2 207 1.43E-72 T 15-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 AM378_05995 320342c54f1904e00f046aaf611950b8 213 Hamap MF_00942 Endonuclease III [nth]. 1 209 36.604 T 15-10-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 AM378_05995 320342c54f1904e00f046aaf611950b8 213 Gene3D G3DSA:1.10.340.30 21 132 3.0E-77 T 15-10-2018 AM378_05995 320342c54f1904e00f046aaf611950b8 213 SMART SM00525 186 206 1.4E-5 T 15-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 AM378_05995 320342c54f1904e00f046aaf611950b8 213 Pfam PF00633 Helix-hairpin-helix motif 100 127 3.4E-7 T 15-10-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 AM378_08545 bb17e2a57aafcbfc134b1a2818b72955 176 Gene3D G3DSA:1.20.1550.10 1 176 1.6E-68 T 15-10-2018 IPR023380 DsbB-like superfamily AM378_08545 bb17e2a57aafcbfc134b1a2818b72955 176 Pfam PF02600 Disulfide bond formation protein DsbB 12 159 1.5E-45 T 15-10-2018 IPR003752 Disulphide bond formation protein DsbB/BdbC GO:0015035|GO:0016020 AM378_08545 bb17e2a57aafcbfc134b1a2818b72955 176 Hamap MF_00286 Disulfide bond formation protein B [dsbB]. 7 167 22.475 T 15-10-2018 IPR022920 Disulphide bond formation protein DsbB AM378_08545 bb17e2a57aafcbfc134b1a2818b72955 176 SUPERFAMILY SSF158442 15 161 1.83E-46 T 15-10-2018 IPR023380 DsbB-like superfamily AM378_09420 0e0e8479ce7cdcdbd5425006a26bad1e 343 TIGRFAM TIGR01540 portal_PBSX: phage portal protein, PBSX family 51 328 3.0E-79 T 15-10-2018 IPR006430 Phage portal protein PBSX family AM378_09420 0e0e8479ce7cdcdbd5425006a26bad1e 343 Pfam PF04860 Phage portal protein 88 322 7.5E-13 T 15-10-2018 IPR006944 Bacteriophage/Gene transfer agent portal protein AM378_09420 0e0e8479ce7cdcdbd5425006a26bad1e 343 PIRSF PIRSF018494 1 343 5.4E-151 T 15-10-2018 IPR030935 Phage portal protein PBSX family, Proteobacteria AM378_01055 7fd8a831642d97da6e34dea539712981 522 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 7 501 1.1E-171 T 15-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 AM378_01055 7fd8a831642d97da6e34dea539712981 522 PIRSF PIRSF006446 1 522 5.9E-139 T 15-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 AM378_08590 43f2613c627645008adca66bb0857f43 562 Pfam PF00501 AMP-binding enzyme 29 460 2.4E-109 T 15-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 AM378_08590 43f2613c627645008adca66bb0857f43 562 Gene3D G3DSA:3.40.50.12780 13 451 5.4E-117 T 15-10-2018 AM378_08590 43f2613c627645008adca66bb0857f43 562 Pfam PF13193 AMP-binding enzyme C-terminal domain 469 543 2.7E-18 T 15-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain AM378_08590 43f2613c627645008adca66bb0857f43 562 Gene3D G3DSA:3.30.300.310 456 557 6.1E-33 T 15-10-2018 AM378_08590 43f2613c627645008adca66bb0857f43 562 ProSitePatterns PS00455 Putative AMP-binding domain signature. 211 222 - T 15-10-2018 IPR020845 AMP-binding, conserved site AM378_08590 43f2613c627645008adca66bb0857f43 562 SUPERFAMILY SSF56801 21 553 3.01E-150 T 15-10-2018 AM378_10060 04505753ca16419dcddec2f38f8967f9 345 Pfam PF13377 Periplasmic binding protein-like domain 174 341 4.9E-30 T 15-10-2018 AM378_10060 04505753ca16419dcddec2f38f8967f9 345 Gene3D G3DSA:1.10.260.40 1 55 3.7E-18 T 15-10-2018 AM378_10060 04505753ca16419dcddec2f38f8967f9 345 SUPERFAMILY SSF53822 60 343 4.07E-52 T 15-10-2018 IPR028082 Periplasmic binding protein-like I AM378_10060 04505753ca16419dcddec2f38f8967f9 345 Pfam PF00356 Bacterial regulatory proteins, lacI family 4 48 7.3E-17 T 15-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM378_10060 04505753ca16419dcddec2f38f8967f9 345 SMART SM00354 1 71 1.9E-20 T 15-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM378_10060 04505753ca16419dcddec2f38f8967f9 345 Gene3D G3DSA:3.40.50.2300 62 333 1.9E-58 T 15-10-2018 AM378_10060 04505753ca16419dcddec2f38f8967f9 345 SUPERFAMILY SSF47413 1 52 1.26E-12 T 15-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AM378_10060 04505753ca16419dcddec2f38f8967f9 345 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 15-10-2018 AM378_10060 04505753ca16419dcddec2f38f8967f9 345 Gene3D G3DSA:3.40.50.2300 166 338 1.9E-58 T 15-10-2018 AM378_00595 1ef345ea15edcfa5b67a393195954962 295 Gene3D G3DSA:1.10.3720.10 47 279 2.8E-45 T 15-10-2018 IPR035906 MetI-like superfamily AM378_00595 1ef345ea15edcfa5b67a393195954962 295 SUPERFAMILY SSF161098 53 259 4.32E-35 T 15-10-2018 IPR035906 MetI-like superfamily AM378_00595 1ef345ea15edcfa5b67a393195954962 295 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 74 271 2.8E-14 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AM378_07780 bad221ac3ebfd9f7fefb525f1aa804bd 549 PIRSF PIRSF002741 1 546 4.8E-95 T 15-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 AM378_07780 bad221ac3ebfd9f7fefb525f1aa804bd 549 Gene3D G3DSA:3.90.76.10 49 221 6.7E-146 T 15-10-2018 AM378_07780 bad221ac3ebfd9f7fefb525f1aa804bd 549 SUPERFAMILY SSF53850 39 540 3.8E-134 T 15-10-2018 AM378_07780 bad221ac3ebfd9f7fefb525f1aa804bd 549 Gene3D G3DSA:3.10.105.10 301 518 6.7E-146 T 15-10-2018 AM378_07780 bad221ac3ebfd9f7fefb525f1aa804bd 549 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 87 109 - T 15-10-2018 IPR023765 Solute-binding protein family 5, conserved site AM378_07780 bad221ac3ebfd9f7fefb525f1aa804bd 549 Gene3D G3DSA:3.40.190.10 222 530 6.7E-146 T 15-10-2018 AM378_07780 bad221ac3ebfd9f7fefb525f1aa804bd 549 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 82 460 1.7E-85 T 15-10-2018 IPR000914 Solute-binding protein family 5 domain AM378_20635 13cf13eff0eeb54fdc40c65368356524 1407 Gene3D G3DSA:1.10.132.30 641 790 7.1E-67 T 15-10-2018 IPR038120 RNA polymerase Rpb1, funnel domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM378_20635 13cf13eff0eeb54fdc40c65368356524 1407 Pfam PF04983 RNA polymerase Rpb1, domain 3 489 644 1.6E-26 T 15-10-2018 IPR007066 RNA polymerase Rpb1, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM378_20635 13cf13eff0eeb54fdc40c65368356524 1407 Gene3D G3DSA:1.10.1790.20 1135 1314 9.4E-59 T 15-10-2018 AM378_20635 13cf13eff0eeb54fdc40c65368356524 1407 Gene3D G3DSA:1.10.150.390 1316 1375 2.9E-28 T 15-10-2018 AM378_20635 13cf13eff0eeb54fdc40c65368356524 1407 SMART SM00663 235 514 1.1E-184 T 15-10-2018 IPR006592 RNA polymerase, N-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM378_20635 13cf13eff0eeb54fdc40c65368356524 1407 Pfam PF05000 RNA polymerase Rpb1, domain 4 674 763 1.7E-18 T 15-10-2018 IPR007083 RNA polymerase Rpb1, domain 4 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM378_20635 13cf13eff0eeb54fdc40c65368356524 1407 Pfam PF00623 RNA polymerase Rpb1, domain 2 392 485 3.9E-27 T 15-10-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM378_20635 13cf13eff0eeb54fdc40c65368356524 1407 Pfam PF00623 RNA polymerase Rpb1, domain 2 344 393 1.2E-7 T 15-10-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM378_20635 13cf13eff0eeb54fdc40c65368356524 1407 Gene3D G3DSA:2.40.50.100 1151 1215 9.4E-59 T 15-10-2018 AM378_20635 13cf13eff0eeb54fdc40c65368356524 1407 Gene3D G3DSA:1.10.40.90 374 416 2.0E-21 T 15-10-2018 AM378_20635 13cf13eff0eeb54fdc40c65368356524 1407 Gene3D G3DSA:2.40.50.100 948 1022 7.0E-26 T 15-10-2018 AM378_20635 13cf13eff0eeb54fdc40c65368356524 1407 TIGRFAM TIGR02386 rpoC_TIGR: DNA-directed RNA polymerase, beta' subunit 19 1367 0.0 T 15-10-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM378_20635 13cf13eff0eeb54fdc40c65368356524 1407 SUPERFAMILY SSF64484 16 1364 0.0 T 15-10-2018 AM378_20635 13cf13eff0eeb54fdc40c65368356524 1407 Hamap MF_01322 DNA-directed RNA polymerase subunit beta' [rpoC]. 10 1377 19.052 T 15-10-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM378_20635 13cf13eff0eeb54fdc40c65368356524 1407 Gene3D G3DSA:1.10.274.100 490 640 1.5E-36 T 15-10-2018 AM378_20635 13cf13eff0eeb54fdc40c65368356524 1407 Pfam PF04998 RNA polymerase Rpb1, domain 5 766 1314 1.4E-77 T 15-10-2018 IPR007081 RNA polymerase Rpb1, domain 5 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM378_20635 13cf13eff0eeb54fdc40c65368356524 1407 Pfam PF04997 RNA polymerase Rpb1, domain 1 15 342 2.3E-89 T 15-10-2018 IPR007080 RNA polymerase Rpb1, domain 1 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM378_20635 13cf13eff0eeb54fdc40c65368356524 1407 Gene3D G3DSA:2.40.50.100 1023 1126 2.1E-29 T 15-10-2018 AM378_14790 0ca295e1e3b4dccde4754eb68d22b8c7 285 SMART SM00342 23 107 1.1E-23 T 15-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM378_14790 0ca295e1e3b4dccde4754eb68d22b8c7 285 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 60 103 - T 15-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AM378_14790 0ca295e1e3b4dccde4754eb68d22b8c7 285 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 76 91 9.7E-7 T 15-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM378_14790 0ca295e1e3b4dccde4754eb68d22b8c7 285 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 91 107 9.7E-7 T 15-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM378_14790 0ca295e1e3b4dccde4754eb68d22b8c7 285 SUPERFAMILY SSF46689 7 57 8.96E-10 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AM378_14790 0ca295e1e3b4dccde4754eb68d22b8c7 285 Pfam PF12833 Helix-turn-helix domain 29 109 1.9E-22 T 15-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM378_14790 0ca295e1e3b4dccde4754eb68d22b8c7 285 SMART SM00871 130 285 2.0E-39 T 15-10-2018 IPR010499 Bacterial transcription activator, effector binding AM378_14790 0ca295e1e3b4dccde4754eb68d22b8c7 285 Gene3D G3DSA:3.20.80.10 130 285 5.2E-37 T 15-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily AM378_14790 0ca295e1e3b4dccde4754eb68d22b8c7 285 Pfam PF06445 GyrI-like small molecule binding domain 130 285 4.2E-34 T 15-10-2018 IPR029442 GyrI-like small molecule binding domain AM378_14790 0ca295e1e3b4dccde4754eb68d22b8c7 285 Gene3D G3DSA:1.10.10.60 2 60 7.0E-15 T 15-10-2018 AM378_14790 0ca295e1e3b4dccde4754eb68d22b8c7 285 SUPERFAMILY SSF55136 130 285 1.83E-36 T 15-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily AM378_14790 0ca295e1e3b4dccde4754eb68d22b8c7 285 SUPERFAMILY SSF46689 59 115 9.86E-12 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AM378_14790 0ca295e1e3b4dccde4754eb68d22b8c7 285 Gene3D G3DSA:1.10.10.60 61 120 6.8E-15 T 15-10-2018 AM378_03515 4462dd344e3c254fe823db1d70d7131f 69 Pfam PF00313 'Cold-shock' DNA-binding domain 5 68 1.2E-30 T 15-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AM378_03515 4462dd344e3c254fe823db1d70d7131f 69 Gene3D G3DSA:2.40.50.140 1 68 1.3E-29 T 15-10-2018 AM378_03515 4462dd344e3c254fe823db1d70d7131f 69 SMART SM00357 5 69 1.9E-28 T 15-10-2018 IPR011129 Cold shock domain GO:0003676 AM378_03515 4462dd344e3c254fe823db1d70d7131f 69 PIRSF PIRSF002599 1 69 6.2E-25 T 15-10-2018 IPR012156 Cold shock, CspA GO:0003676 AM378_03515 4462dd344e3c254fe823db1d70d7131f 69 PRINTS PR00050 Cold shock protein signature 6 21 7.0E-16 T 15-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AM378_03515 4462dd344e3c254fe823db1d70d7131f 69 PRINTS PR00050 Cold shock protein signature 42 60 7.0E-16 T 15-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AM378_03515 4462dd344e3c254fe823db1d70d7131f 69 PRINTS PR00050 Cold shock protein signature 27 36 7.0E-16 T 15-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AM378_03515 4462dd344e3c254fe823db1d70d7131f 69 SUPERFAMILY SSF50249 4 68 7.93E-25 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold AM378_03515 4462dd344e3c254fe823db1d70d7131f 69 ProSitePatterns PS00352 'Cold-shock' domain signature. 17 36 - T 15-10-2018 IPR019844 Cold-shock conserved site AM378_03105 af959586f4218d20bf632fddf20f3277 296 Gene3D G3DSA:1.10.10.10 3 91 1.5E-20 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_03105 af959586f4218d20bf632fddf20f3277 296 Gene3D G3DSA:3.40.190.10 161 252 1.8E-34 T 15-10-2018 AM378_03105 af959586f4218d20bf632fddf20f3277 296 Pfam PF03466 LysR substrate binding domain 88 279 5.2E-21 T 15-10-2018 IPR005119 LysR, substrate-binding AM378_03105 af959586f4218d20bf632fddf20f3277 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 63 1.2E-16 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_03105 af959586f4218d20bf632fddf20f3277 296 SUPERFAMILY SSF46785 2 81 3.54E-18 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM378_03105 af959586f4218d20bf632fddf20f3277 296 Gene3D G3DSA:3.40.190.10 99 278 1.8E-34 T 15-10-2018 AM378_03105 af959586f4218d20bf632fddf20f3277 296 SUPERFAMILY SSF53850 90 283 3.26E-24 T 15-10-2018 AM378_01290 9de372cf96aa333f44699be24d6361cc 331 SUPERFAMILY SSF50974 4 290 8.11E-49 T 15-10-2018 IPR011045 Nitrous oxide reductase, N-terminal Reactome: R-HSA-114608 AM378_01290 9de372cf96aa333f44699be24d6361cc 331 Pfam PF10282 Lactonase, 7-bladed beta-propeller 5 327 1.0E-93 T 15-10-2018 IPR019405 Lactonase, 7-bladed beta propeller AM378_01290 9de372cf96aa333f44699be24d6361cc 331 Hamap MF_01605 6-phosphogluconolactonase [pgl]. 1 331 55.657 T 15-10-2018 IPR022528 6-phosphogluconolactonase, YbhE-type GO:0005975|GO:0006098|GO:0017057 KEGG: 00030+3.1.1.31 AM378_01290 9de372cf96aa333f44699be24d6361cc 331 Gene3D G3DSA:2.130.10.10 1 331 3.0E-124 T 15-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 AM378_01485 593c960fedfea4e31d776468113ad729 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 62 7.4E-16 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_01485 593c960fedfea4e31d776468113ad729 297 Gene3D G3DSA:1.10.10.10 3 94 1.9E-17 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_01485 593c960fedfea4e31d776468113ad729 297 SUPERFAMILY SSF46785 6 88 2.72E-16 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM378_01485 593c960fedfea4e31d776468113ad729 297 Gene3D G3DSA:3.40.190.290 95 297 5.4E-27 T 15-10-2018 AM378_01485 593c960fedfea4e31d776468113ad729 297 Pfam PF03466 LysR substrate binding domain 88 294 3.2E-28 T 15-10-2018 IPR005119 LysR, substrate-binding AM378_01485 593c960fedfea4e31d776468113ad729 297 SUPERFAMILY SSF53850 89 296 4.89E-31 T 15-10-2018 AM378_01985 b5b95606a072c87b5d91acc087c271e8 376 Gene3D G3DSA:3.40.50.720 1 133 2.7E-37 T 15-10-2018 AM378_01985 b5b95606a072c87b5d91acc087c271e8 376 SUPERFAMILY SSF51735 3 158 7.75E-47 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily AM378_01985 b5b95606a072c87b5d91acc087c271e8 376 SUPERFAMILY SSF55347 135 310 4.09E-35 T 15-10-2018 AM378_01985 b5b95606a072c87b5d91acc087c271e8 376 Gene3D G3DSA:3.30.360.10 136 374 6.4E-66 T 15-10-2018 AM378_01985 b5b95606a072c87b5d91acc087c271e8 376 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 4 130 1.0E-22 T 15-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 AM378_01985 b5b95606a072c87b5d91acc087c271e8 376 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 142 264 9.4E-9 T 15-10-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 AM378_14890 c00b7c5dd3198e17e059ec40907510b4 88 SUPERFAMILY SSF109910 1 78 8.5E-27 T 15-10-2018 IPR036714 Flavinator of succinate dehydrogenase superfamily AM378_14890 c00b7c5dd3198e17e059ec40907510b4 88 Gene3D G3DSA:1.10.150.250 1 88 8.6E-39 T 15-10-2018 IPR036714 Flavinator of succinate dehydrogenase superfamily AM378_14890 c00b7c5dd3198e17e059ec40907510b4 88 Pfam PF03937 Flavinator of succinate dehydrogenase 6 76 8.7E-25 T 15-10-2018 IPR005631 Flavinator of succinate dehydrogenase AM378_09770 503d6e2260bf3cc1a8b9004648c346c4 383 Gene3D G3DSA:3.40.1690.10 217 359 1.2E-59 T 15-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal AM378_09770 503d6e2260bf3cc1a8b9004648c346c4 383 Pfam PF01312 FlhB HrpN YscU SpaS Family 8 347 7.1E-127 T 15-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 AM378_09770 503d6e2260bf3cc1a8b9004648c346c4 383 TIGRFAM TIGR00328 flhB: flagellar biosynthetic protein FlhB 8 354 1.8E-134 T 15-10-2018 IPR006136 Flagellar biosynthetic protein FlhB GO:0015031|GO:0016021|GO:0044780 AM378_09770 503d6e2260bf3cc1a8b9004648c346c4 383 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 302 323 6.3E-42 T 15-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 AM378_09770 503d6e2260bf3cc1a8b9004648c346c4 383 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 10 32 6.3E-42 T 15-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 AM378_09770 503d6e2260bf3cc1a8b9004648c346c4 383 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 228 245 6.3E-42 T 15-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 AM378_09770 503d6e2260bf3cc1a8b9004648c346c4 383 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 272 287 6.3E-42 T 15-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 AM378_09770 503d6e2260bf3cc1a8b9004648c346c4 383 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 208 226 6.3E-42 T 15-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 AM378_09770 503d6e2260bf3cc1a8b9004648c346c4 383 SUPERFAMILY SSF160544 251 355 1.7E-41 T 15-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal AM378_06680 cbc3ca7d4b59a3eb6ae94e4535950741 249 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 1.9E-8 T 15-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AM378_06680 cbc3ca7d4b59a3eb6ae94e4535950741 249 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 1.9E-8 T 15-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AM378_06680 cbc3ca7d4b59a3eb6ae94e4535950741 249 SUPERFAMILY SSF100950 75 233 1.67E-24 T 15-10-2018 IPR037171 NagB/RpiA transferase-like AM378_06680 cbc3ca7d4b59a3eb6ae94e4535950741 249 Pfam PF08220 DeoR-like helix-turn-helix domain 6 60 1.9E-15 T 15-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AM378_06680 cbc3ca7d4b59a3eb6ae94e4535950741 249 Pfam PF00455 DeoR C terminal sensor domain 76 229 2.4E-42 T 15-10-2018 IPR014036 DeoR C-terminal sensor domain AM378_06680 cbc3ca7d4b59a3eb6ae94e4535950741 249 SMART SM00420 6 58 2.1E-14 T 15-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AM378_06680 cbc3ca7d4b59a3eb6ae94e4535950741 249 SUPERFAMILY SSF46785 5 60 1.4E-11 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM378_06680 cbc3ca7d4b59a3eb6ae94e4535950741 249 SMART SM01134 71 230 2.9E-59 T 15-10-2018 AM378_06680 cbc3ca7d4b59a3eb6ae94e4535950741 249 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 15-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 AM378_06680 cbc3ca7d4b59a3eb6ae94e4535950741 249 Gene3D G3DSA:1.10.10.10 1 55 2.5E-6 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_07915 3a9c9b050a2314ace063351892c20559 221 Gene3D G3DSA:3.20.20.70 1 220 1.2E-76 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM378_07915 3a9c9b050a2314ace063351892c20559 221 ProSitePatterns PS01054 Transaldolase signature 1. 24 32 - T 15-10-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 AM378_07915 3a9c9b050a2314ace063351892c20559 221 SUPERFAMILY SSF51569 1 215 1.15E-63 T 15-10-2018 AM378_07915 3a9c9b050a2314ace063351892c20559 221 TIGRFAM TIGR00875 fsa_talC_mipB: fructose-6-phosphate aldolase 1 214 7.0E-84 T 15-10-2018 IPR004731 Transaldolase type 3B/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723 AM378_07915 3a9c9b050a2314ace063351892c20559 221 ProSitePatterns PS00958 Transaldolase active site. 82 99 - T 15-10-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 AM378_07915 3a9c9b050a2314ace063351892c20559 221 Pfam PF00923 Transaldolase/Fructose-6-phosphate aldolase 3 206 6.6E-43 T 15-10-2018 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 AM378_16685 016c7d14b15df0f6e1da122ba9623294 404 Pfam PF10282 Lactonase, 7-bladed beta-propeller 39 399 1.1E-109 T 15-10-2018 IPR019405 Lactonase, 7-bladed beta propeller AM378_16685 016c7d14b15df0f6e1da122ba9623294 404 Gene3D G3DSA:2.130.10.10 32 401 1.5E-104 T 15-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 AM378_16685 016c7d14b15df0f6e1da122ba9623294 404 SUPERFAMILY SSF51004 48 380 1.2E-42 T 15-10-2018 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain superfamily AM378_20510 54424002655aecd148c1c7f05bab0dec 443 Pfam PF00557 Metallopeptidase family M24 168 430 2.0E-43 T 15-10-2018 IPR000994 Peptidase M24 AM378_20510 54424002655aecd148c1c7f05bab0dec 443 ProSitePatterns PS00491 Aminopeptidase P and proline dipeptidase signature. 335 347 - T 15-10-2018 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site AM378_20510 54424002655aecd148c1c7f05bab0dec 443 SUPERFAMILY SSF55920 163 438 1.31E-53 T 15-10-2018 IPR036005 Creatinase/aminopeptidase-like AM378_20510 54424002655aecd148c1c7f05bab0dec 443 Hamap MF_01279 Xaa-Pro dipeptidase [pepQ]. 1 443 57.667 T 15-10-2018 IPR022846 Xaa-Pro dipeptidase GO:0016795 AM378_20510 54424002655aecd148c1c7f05bab0dec 443 Gene3D G3DSA:3.40.350.10 1 159 7.2E-61 T 15-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal AM378_20510 54424002655aecd148c1c7f05bab0dec 443 Gene3D G3DSA:3.90.230.10 160 443 6.2E-77 T 15-10-2018 AM378_21720 dccf2fb8ea764269a5d9fecdf7397f2d 461 Pfam PF02447 GntP family permease 7 457 1.1E-136 T 15-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 AM378_21720 dccf2fb8ea764269a5d9fecdf7397f2d 461 PIRSF PIRSF002746 2 461 9.4E-146 T 15-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 AM378_21720 dccf2fb8ea764269a5d9fecdf7397f2d 461 TIGRFAM TIGR00791 gntP: transporter, gluconate:H+ symporter (GntP) family 7 459 2.7E-94 T 15-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 AM378_18110 c8c281f4eed74210418b581b7fec9f1c 294 Pfam PF01261 Xylose isomerase-like TIM barrel 20 238 1.7E-35 T 15-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain AM378_18110 c8c281f4eed74210418b581b7fec9f1c 294 Gene3D G3DSA:3.20.20.150 9 255 7.2E-36 T 15-10-2018 AM378_18110 c8c281f4eed74210418b581b7fec9f1c 294 SUPERFAMILY SSF51658 1 253 8.98E-41 T 15-10-2018 IPR036237 Xylose isomerase-like superfamily AM378_01405 9e390a3bc831ca6e8d4d676bfa739017 460 SMART SM00490 259 340 7.4E-32 T 15-10-2018 IPR001650 Helicase, C-terminal AM378_01405 9e390a3bc831ca6e8d4d676bfa739017 460 Hamap MF_00968 ATP-dependent RNA helicase RhlE [rhlE]. 1 456 51.5 T 15-10-2018 IPR028622 ATP-dependent RNA helicase RhlE GO:0004004|GO:0042255 AM378_01405 9e390a3bc831ca6e8d4d676bfa739017 460 Gene3D G3DSA:3.40.50.300 215 389 1.8E-50 T 15-10-2018 AM378_01405 9e390a3bc831ca6e8d4d676bfa739017 460 SUPERFAMILY SSF52540 75 361 2.0E-73 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_01405 9e390a3bc831ca6e8d4d676bfa739017 460 Pfam PF00270 DEAD/DEAH box helicase 25 196 8.0E-50 T 15-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AM378_01405 9e390a3bc831ca6e8d4d676bfa739017 460 SMART SM00487 20 223 1.1E-60 T 15-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AM378_01405 9e390a3bc831ca6e8d4d676bfa739017 460 Gene3D G3DSA:3.40.50.300 1 211 1.5E-77 T 15-10-2018 AM378_01405 9e390a3bc831ca6e8d4d676bfa739017 460 Pfam PF00271 Helicase conserved C-terminal domain 235 339 2.3E-26 T 15-10-2018 IPR001650 Helicase, C-terminal AM378_01405 9e390a3bc831ca6e8d4d676bfa739017 460 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 154 162 - T 15-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site AM378_03585 badb901295d4b140299441a1ceea6c99 396 Pfam PF00155 Aminotransferase class I and II 27 392 2.0E-91 T 15-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AM378_03585 badb901295d4b140299441a1ceea6c99 396 Gene3D G3DSA:3.90.1150.10 11 391 1.2E-162 T 15-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AM378_03585 badb901295d4b140299441a1ceea6c99 396 Gene3D G3DSA:3.40.640.10 45 315 1.2E-162 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AM378_03585 badb901295d4b140299441a1ceea6c99 396 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 243 256 - T 15-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 AM378_03585 badb901295d4b140299441a1ceea6c99 396 PRINTS PR00799 Aspartate aminotransferase signature 341 359 8.1E-40 T 15-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 AM378_03585 badb901295d4b140299441a1ceea6c99 396 PRINTS PR00799 Aspartate aminotransferase signature 175 194 8.1E-40 T 15-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 AM378_03585 badb901295d4b140299441a1ceea6c99 396 PRINTS PR00799 Aspartate aminotransferase signature 273 298 8.1E-40 T 15-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 AM378_03585 badb901295d4b140299441a1ceea6c99 396 PRINTS PR00799 Aspartate aminotransferase signature 206 218 8.1E-40 T 15-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 AM378_03585 badb901295d4b140299441a1ceea6c99 396 SUPERFAMILY SSF53383 1 396 2.74E-119 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM378_14910 726091d250ef47bae71712268c00ab43 202 Gene3D G3DSA:1.10.3210.10 9 202 5.0E-54 T 15-10-2018 AM378_14910 726091d250ef47bae71712268c00ab43 202 SUPERFAMILY SSF109604 13 192 4.4E-44 T 15-10-2018 AM378_14910 726091d250ef47bae71712268c00ab43 202 Pfam PF13023 HD domain 23 185 2.6E-49 T 15-10-2018 IPR006674 HD domain AM378_13015 5aeeeda8073712a739d0a229b00d3437 723 SUPERFAMILY SSF50969 97 370 1.33E-11 T 15-10-2018 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like AM378_13015 5aeeeda8073712a739d0a229b00d3437 723 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 444 715 1.5E-11 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AM378_13015 5aeeeda8073712a739d0a229b00d3437 723 SUPERFAMILY SSF161098 494 705 7.06E-20 T 15-10-2018 IPR035906 MetI-like superfamily AM378_13015 5aeeeda8073712a739d0a229b00d3437 723 SUPERFAMILY SSF161098 406 500 6.38E-6 T 15-10-2018 IPR035906 MetI-like superfamily AM378_13015 5aeeeda8073712a739d0a229b00d3437 723 Gene3D G3DSA:1.10.3720.10 484 716 9.4E-21 T 15-10-2018 IPR035906 MetI-like superfamily AM378_16795 52889512e6f2c858ded711d8af45e082 311 Gene3D G3DSA:2.40.50.100 47 114 9.3E-11 T 15-10-2018 AM378_16795 52889512e6f2c858ded711d8af45e082 311 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 46 241 1.3E-32 T 15-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AM378_16795 52889512e6f2c858ded711d8af45e082 311 SUPERFAMILY SSF111369 46 243 1.16E-22 T 15-10-2018 AM378_16795 52889512e6f2c858ded711d8af45e082 311 Pfam PF13437 HlyD family secretion protein 156 241 2.4E-9 T 15-10-2018 AM378_16795 52889512e6f2c858ded711d8af45e082 311 Gene3D G3DSA:2.40.30.170 170 295 3.9E-20 T 15-10-2018 AM378_16795 52889512e6f2c858ded711d8af45e082 311 Hamap MF_01544 p-hydroxybenzoic acid efflux pump subunit AaeA [aaeA]. 1 311 56.092 T 15-10-2018 IPR022871 Para-hydroxybenzoic acid efflux pump, subunit AaeA AM378_16795 52889512e6f2c858ded711d8af45e082 311 Pfam PF13533 Biotin-lipoyl like 47 95 1.5E-16 T 15-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain AM378_07815 1365a9fc2c621fe19701abe0aeddfe52 182 Pfam PF12306 Inclusion body protein 12 180 6.1E-50 T 15-10-2018 IPR021087 Uncharacterised protein family PixA/AidA AM378_07815 1365a9fc2c621fe19701abe0aeddfe52 182 Gene3D G3DSA:2.60.40.3910 4 180 2.5E-58 T 15-10-2018 IPR038712 PixA-like superfamily AM378_08855 f7f1dd32015db9c69d08995b03517a3d 192 Pfam PF00293 NUDIX domain 32 145 8.6E-13 T 15-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 AM378_08855 f7f1dd32015db9c69d08995b03517a3d 192 Gene3D G3DSA:3.90.79.10 12 191 3.4E-46 T 15-10-2018 AM378_08855 f7f1dd32015db9c69d08995b03517a3d 192 ProSitePatterns PS01293 Nudix CoA signature. 49 69 - T 15-10-2018 IPR000059 NUDIX hydrolase, NudL, conserved site GO:0000287|GO:0009132|GO:0016818|GO:0030145 Reactome: R-HSA-390918|Reactome: R-HSA-9033241 AM378_08855 f7f1dd32015db9c69d08995b03517a3d 192 SUPERFAMILY SSF55811 15 183 6.23E-31 T 15-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 AM378_23230 c6d368dfc94b6dd3d58fe84df0d2f3e0 162 Pfam PF02464 Competence-damaged protein 10 158 3.2E-57 T 15-10-2018 IPR008136 CinA, C-terminal AM378_23230 c6d368dfc94b6dd3d58fe84df0d2f3e0 162 TIGRFAM TIGR00199 PncC_domain: amidohydrolase, PncC family 14 156 1.8E-55 T 15-10-2018 IPR008136 CinA, C-terminal AM378_23230 c6d368dfc94b6dd3d58fe84df0d2f3e0 162 SUPERFAMILY SSF142433 7 159 4.58E-55 T 15-10-2018 IPR036653 CinA-like, C-terminal AM378_23230 c6d368dfc94b6dd3d58fe84df0d2f3e0 162 Gene3D G3DSA:3.90.950.20 1 161 1.7E-59 T 15-10-2018 IPR036653 CinA-like, C-terminal AM378_15795 7044ec6b6d6786dc78a0a0bcd20f5eea 438 Pfam PF01546 Peptidase family M20/M25/M40 115 429 2.7E-27 T 15-10-2018 IPR002933 Peptidase M20 GO:0016787 AM378_15795 7044ec6b6d6786dc78a0a0bcd20f5eea 438 SUPERFAMILY SSF55031 229 336 1.31E-23 T 15-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain AM378_15795 7044ec6b6d6786dc78a0a0bcd20f5eea 438 SUPERFAMILY SSF53187 9 431 2.48E-62 T 15-10-2018 AM378_15795 7044ec6b6d6786dc78a0a0bcd20f5eea 438 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 18 420 6.0E-111 T 15-10-2018 IPR017439 Amidohydrolase GO:0016787 AM378_15795 7044ec6b6d6786dc78a0a0bcd20f5eea 438 PIRSF PIRSF005962 1 433 3.3E-120 T 15-10-2018 IPR017439 Amidohydrolase GO:0016787 AM378_15795 7044ec6b6d6786dc78a0a0bcd20f5eea 438 Gene3D G3DSA:3.40.630.10 3 319 1.2E-89 T 15-10-2018 AM378_15795 7044ec6b6d6786dc78a0a0bcd20f5eea 438 Pfam PF07687 Peptidase dimerisation domain 233 316 6.5E-11 T 15-10-2018 IPR011650 Peptidase M20, dimerisation domain AM378_11775 b6c97904d07c7e8f4a465e4e745ae09e 912 Pfam PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region 88 124 1.1E-14 T 15-10-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM378_11775 b6c97904d07c7e8f4a465e4e745ae09e 912 ProSitePatterns PS00642 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 2. 103 115 - T 15-10-2018 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM378_11775 b6c97904d07c7e8f4a465e4e745ae09e 912 ProSitePatterns PS00643 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 3. 150 160 - T 15-10-2018 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM378_11775 b6c97904d07c7e8f4a465e4e745ae09e 912 SMART SM00929 88 128 1.9E-19 T 15-10-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM378_11775 b6c97904d07c7e8f4a465e4e745ae09e 912 TIGRFAM TIGR01973 NuoG: NADH dehydrogenase (quinone), G subunit 4 660 1.1E-203 T 15-10-2018 IPR010228 NADH:ubiquinone oxidoreductase, subunit G GO:0016651|GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM378_11775 b6c97904d07c7e8f4a465e4e745ae09e 912 Pfam PF00384 Molybdopterin oxidoreductase 555 638 1.0E-6 T 15-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM378_11775 b6c97904d07c7e8f4a465e4e745ae09e 912 SMART SM00926 221 275 1.0E-8 T 15-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM378_11775 b6c97904d07c7e8f4a465e4e745ae09e 912 SUPERFAMILY SSF54292 1 77 1.07E-18 T 15-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 AM378_11775 b6c97904d07c7e8f4a465e4e745ae09e 912 Pfam PF01568 Molydopterin dinucleotide binding domain 830 894 4.2E-7 T 15-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 AM378_11775 b6c97904d07c7e8f4a465e4e745ae09e 912 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 3 78 1.7E-11 T 15-10-2018 AM378_11775 b6c97904d07c7e8f4a465e4e745ae09e 912 SUPERFAMILY SSF54862 82 213 1.8E-33 T 15-10-2018 AM378_11775 b6c97904d07c7e8f4a465e4e745ae09e 912 Gene3D G3DSA:3.10.20.740 1 127 1.9E-28 T 15-10-2018 AM378_11775 b6c97904d07c7e8f4a465e4e745ae09e 912 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 221 275 1.3E-9 T 15-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM378_11775 b6c97904d07c7e8f4a465e4e745ae09e 912 ProSitePatterns PS00641 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 1. 31 48 - T 15-10-2018 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM378_11775 b6c97904d07c7e8f4a465e4e745ae09e 912 Gene3D G3DSA:2.40.40.20 814 909 1.5E-9 T 15-10-2018 AM378_11775 b6c97904d07c7e8f4a465e4e745ae09e 912 Gene3D G3DSA:3.40.50.740 501 692 1.6E-10 T 15-10-2018 AM378_11775 b6c97904d07c7e8f4a465e4e745ae09e 912 Gene3D G3DSA:2.20.25.90 221 275 1.6E-12 T 15-10-2018 AM378_11775 b6c97904d07c7e8f4a465e4e745ae09e 912 SUPERFAMILY SSF53706 219 693 1.81E-78 T 15-10-2018 AM378_11775 b6c97904d07c7e8f4a465e4e745ae09e 912 SUPERFAMILY SSF50692 819 895 1.51E-13 T 15-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily AM378_23910 e6b81d3047f1a2dc8c15a487793ef079 162 Pfam PF10696 Protein of unknown function (DUF2501) 82 160 2.6E-30 T 15-10-2018 IPR019637 Protein of unknown function DUF2501 AM378_00450 50716daa7153835d26b174053d6b1cd1 415 Pfam PF01546 Peptidase family M20/M25/M40 78 404 8.0E-32 T 15-10-2018 IPR002933 Peptidase M20 GO:0016787 AM378_00450 50716daa7153835d26b174053d6b1cd1 415 SUPERFAMILY SSF53187 6 407 3.43E-79 T 15-10-2018 AM378_00450 50716daa7153835d26b174053d6b1cd1 415 TIGRFAM TIGR01879 hydantase: amidase, hydantoinase/carbamoylase family 8 406 1.3E-161 T 15-10-2018 IPR010158 Amidase, carbamoylase-type GO:0016813 AM378_00450 50716daa7153835d26b174053d6b1cd1 415 TIGRFAM TIGR03176 AllC: allantoate amidohydrolase 2 409 7.0E-208 T 15-10-2018 IPR017591 Allantoate amidohydrolase GO:0000256|GO:0009442|GO:0030145|GO:0042803|GO:0047652 KEGG: 00230+3.5.3.9|MetaCyc: PWY-5698 AM378_00450 50716daa7153835d26b174053d6b1cd1 415 SUPERFAMILY SSF55031 211 327 2.09E-25 T 15-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain AM378_00450 50716daa7153835d26b174053d6b1cd1 415 Gene3D G3DSA:3.40.630.10 18 399 9.3E-136 T 15-10-2018 AM378_00450 50716daa7153835d26b174053d6b1cd1 415 PIRSF PIRSF001235 2 411 1.4E-127 T 15-10-2018 IPR010158 Amidase, carbamoylase-type GO:0016813 AM378_00450 50716daa7153835d26b174053d6b1cd1 415 Gene3D G3DSA:3.30.70.360 211 325 9.3E-136 T 15-10-2018 AM378_03430 04fbe96ece37d48005cb696f634064de 430 Pfam PF02403 Seryl-tRNA synthetase N-terminal domain 1 107 8.8E-30 T 15-10-2018 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: R-HSA-2408557|Reactome: R-HSA-379716 AM378_03430 04fbe96ece37d48005cb696f634064de 430 TIGRFAM TIGR00414 serS: serine--tRNA ligase 1 423 1.3E-177 T 15-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 AM378_03430 04fbe96ece37d48005cb696f634064de 430 Gene3D G3DSA:1.10.287.40 1 104 4.0E-18 T 15-10-2018 AM378_03430 04fbe96ece37d48005cb696f634064de 430 SUPERFAMILY SSF46589 1 112 1.99E-29 T 15-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 AM378_03430 04fbe96ece37d48005cb696f634064de 430 SUPERFAMILY SSF55681 116 425 1.6E-99 T 15-10-2018 AM378_03430 04fbe96ece37d48005cb696f634064de 430 PIRSF PIRSF001529 1 430 1.0E-179 T 15-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 AM378_03430 04fbe96ece37d48005cb696f634064de 430 Gene3D G3DSA:3.30.930.10 105 430 6.3E-115 T 15-10-2018 AM378_03430 04fbe96ece37d48005cb696f634064de 430 Hamap MF_00176 Serine--tRNA ligase [serS]. 1 428 41.162 T 15-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 AM378_03430 04fbe96ece37d48005cb696f634064de 430 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 228 406 5.9E-36 T 15-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM378_03430 04fbe96ece37d48005cb696f634064de 430 PRINTS PR00981 Seryl-tRNA synthetase signature 322 335 8.3E-34 T 15-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 AM378_03430 04fbe96ece37d48005cb696f634064de 430 PRINTS PR00981 Seryl-tRNA synthetase signature 282 295 8.3E-34 T 15-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 AM378_03430 04fbe96ece37d48005cb696f634064de 430 PRINTS PR00981 Seryl-tRNA synthetase signature 339 355 8.3E-34 T 15-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 AM378_03430 04fbe96ece37d48005cb696f634064de 430 PRINTS PR00981 Seryl-tRNA synthetase signature 270 282 8.3E-34 T 15-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 AM378_03430 04fbe96ece37d48005cb696f634064de 430 PRINTS PR00981 Seryl-tRNA synthetase signature 357 373 8.3E-34 T 15-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 AM378_12555 84ec1f00aa605b1f6f67581f41944d21 306 Pfam PF03466 LysR substrate binding domain 90 293 6.1E-45 T 15-10-2018 IPR005119 LysR, substrate-binding AM378_12555 84ec1f00aa605b1f6f67581f41944d21 306 SUPERFAMILY SSF46785 3 112 9.7E-26 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM378_12555 84ec1f00aa605b1f6f67581f41944d21 306 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 8.1E-23 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_12555 84ec1f00aa605b1f6f67581f41944d21 306 SUPERFAMILY SSF53850 91 294 2.31E-40 T 15-10-2018 AM378_12555 84ec1f00aa605b1f6f67581f41944d21 306 Gene3D G3DSA:3.40.190.290 92 301 7.1E-49 T 15-10-2018 AM378_12555 84ec1f00aa605b1f6f67581f41944d21 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 5.5E-7 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_12555 84ec1f00aa605b1f6f67581f41944d21 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 5.5E-7 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_12555 84ec1f00aa605b1f6f67581f41944d21 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 5.5E-7 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_12555 84ec1f00aa605b1f6f67581f41944d21 306 Gene3D G3DSA:1.10.10.10 1 85 3.6E-27 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_00315 2f0b3297d77715a0392ea5ab3891e4d5 406 Pfam PF07690 Major Facilitator Superfamily 30 362 2.1E-37 T 15-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM378_00315 2f0b3297d77715a0392ea5ab3891e4d5 406 SUPERFAMILY SSF103473 18 404 2.09E-57 T 15-10-2018 IPR036259 MFS transporter superfamily AM378_00315 2f0b3297d77715a0392ea5ab3891e4d5 406 Gene3D G3DSA:1.20.1250.20 222 404 2.1E-18 T 15-10-2018 AM378_00315 2f0b3297d77715a0392ea5ab3891e4d5 406 Gene3D G3DSA:1.20.1250.20 16 204 1.2E-21 T 15-10-2018 AM378_19065 68f0c94201073563b0d858e89d13d2e4 553 Pfam PF05170 AsmA family 254 546 5.1E-17 T 15-10-2018 IPR007844 AsmA AM378_22860 efe8dbbd35f5aef061c6d273f9d93597 418 Gene3D G3DSA:3.30.1490.110 87 169 3.2E-115 T 15-10-2018 AM378_22860 efe8dbbd35f5aef061c6d273f9d93597 418 Gene3D G3DSA:3.30.420.40 197 359 3.2E-115 T 15-10-2018 AM378_22860 efe8dbbd35f5aef061c6d273f9d93597 418 SUPERFAMILY SSF53067 8 221 5.5E-62 T 15-10-2018 AM378_22860 efe8dbbd35f5aef061c6d273f9d93597 418 TIGRFAM TIGR01174 ftsA: cell division protein FtsA 9 385 2.7E-161 T 15-10-2018 IPR020823 Cell division protein FtsA AM378_22860 efe8dbbd35f5aef061c6d273f9d93597 418 PIRSF PIRSF003101 1 418 4.4E-153 T 15-10-2018 IPR020823 Cell division protein FtsA AM378_22860 efe8dbbd35f5aef061c6d273f9d93597 418 Gene3D G3DSA:3.30.420.40 13 379 3.2E-115 T 15-10-2018 AM378_22860 efe8dbbd35f5aef061c6d273f9d93597 418 Pfam PF02491 SHS2 domain inserted in FTSA 85 162 5.3E-30 T 15-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 AM378_22860 efe8dbbd35f5aef061c6d273f9d93597 418 Gene3D G3DSA:3.90.640.10 235 300 3.2E-115 T 15-10-2018 AM378_22860 efe8dbbd35f5aef061c6d273f9d93597 418 SMART SM00842 10 196 2.4E-96 T 15-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 AM378_22860 efe8dbbd35f5aef061c6d273f9d93597 418 Hamap MF_02033 Cell division protein FtsA [ftsA]. 6 418 29.5 T 15-10-2018 IPR020823 Cell division protein FtsA AM378_22860 efe8dbbd35f5aef061c6d273f9d93597 418 Pfam PF14450 Cell division protein FtsA 207 381 5.4E-24 T 15-10-2018 AM378_22860 efe8dbbd35f5aef061c6d273f9d93597 418 SUPERFAMILY SSF53067 198 384 1.07E-46 T 15-10-2018 AM378_20695 6c428e633c5a4bcc143e350aa7f0b61b 167 Hamap MF_01181 Regulator of sigma D [rsd]. 1 153 39.326 T 15-10-2018 IPR023785 Regulator of RNA polymerase sigma(70) subunit, Rsd AM378_20695 6c428e633c5a4bcc143e350aa7f0b61b 167 Pfam PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ 1 148 1.5E-57 T 15-10-2018 IPR007448 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ GO:0006355 AM378_20695 6c428e633c5a4bcc143e350aa7f0b61b 167 Gene3D G3DSA:1.20.120.1370 1 152 1.2E-55 T 15-10-2018 IPR038309 Rsd/AlgQ superfamily AM378_20695 6c428e633c5a4bcc143e350aa7f0b61b 167 PIRSF PIRSF016548 1 161 1.0E-54 T 15-10-2018 IPR007448 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ GO:0006355 AM378_18725 e4176b163f1b3094facbcbfaf5d61d68 444 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 336 406 2.6E-6 T 15-10-2018 IPR019489 Clp ATPase, C-terminal AM378_18725 e4176b163f1b3094facbcbfaf5d61d68 444 Hamap MF_00249 ATP-dependent protease ATPase subunit HslU [hslU]. 1 444 43.595 T 15-10-2018 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 AM378_18725 e4176b163f1b3094facbcbfaf5d61d68 444 Gene3D G3DSA:1.10.8.60 336 441 1.9E-42 T 15-10-2018 AM378_18725 e4176b163f1b3094facbcbfaf5d61d68 444 Pfam PF07724 AAA domain (Cdc48 subfamily) 188 330 1.9E-41 T 15-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AM378_18725 e4176b163f1b3094facbcbfaf5d61d68 444 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 53 135 3.4E-7 T 15-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AM378_18725 e4176b163f1b3094facbcbfaf5d61d68 444 SMART SM00382 49 333 2.1E-13 T 15-10-2018 IPR003593 AAA+ ATPase domain AM378_18725 e4176b163f1b3094facbcbfaf5d61d68 444 TIGRFAM TIGR00390 hslU: ATP-dependent protease HslVU, ATPase subunit 4 444 4.5E-231 T 15-10-2018 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 AM378_18725 e4176b163f1b3094facbcbfaf5d61d68 444 SMART SM01086 336 435 1.0E-23 T 15-10-2018 IPR019489 Clp ATPase, C-terminal AM378_18725 e4176b163f1b3094facbcbfaf5d61d68 444 SUPERFAMILY SSF52540 3 442 6.88E-96 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_23430 2d4b0bec0e5989a7c119ae3ff2a40e11 295 SUPERFAMILY SSF46785 5 88 5.08E-21 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM378_23430 2d4b0bec0e5989a7c119ae3ff2a40e11 295 Gene3D G3DSA:1.10.10.10 1 87 6.6E-28 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_23430 2d4b0bec0e5989a7c119ae3ff2a40e11 295 Gene3D G3DSA:3.40.190.10 92 290 2.5E-64 T 15-10-2018 AM378_23430 2d4b0bec0e5989a7c119ae3ff2a40e11 295 Pfam PF03466 LysR substrate binding domain 89 293 2.6E-42 T 15-10-2018 IPR005119 LysR, substrate-binding AM378_23430 2d4b0bec0e5989a7c119ae3ff2a40e11 295 SUPERFAMILY SSF53850 90 294 2.9E-42 T 15-10-2018 AM378_23430 2d4b0bec0e5989a7c119ae3ff2a40e11 295 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 64 1.2E-18 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_23430 2d4b0bec0e5989a7c119ae3ff2a40e11 295 Gene3D G3DSA:3.40.190.10 164 264 2.5E-64 T 15-10-2018 AM378_12895 e0bb613b51e4f5e0212f1bf1d99a4058 402 Gene3D G3DSA:3.50.50.100 1 388 1.8E-74 T 15-10-2018 AM378_12895 e0bb613b51e4f5e0212f1bf1d99a4058 402 SUPERFAMILY SSF51905 2 354 3.78E-24 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AM378_12895 e0bb613b51e4f5e0212f1bf1d99a4058 402 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 4 314 1.4E-38 T 15-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM378_12895 e0bb613b51e4f5e0212f1bf1d99a4058 402 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 156 174 2.7E-10 T 15-10-2018 AM378_12895 e0bb613b51e4f5e0212f1bf1d99a4058 402 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 5 24 2.7E-10 T 15-10-2018 AM378_12895 e0bb613b51e4f5e0212f1bf1d99a4058 402 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 103 121 2.7E-10 T 15-10-2018 AM378_17065 27c4c9d7cf7c7f8dad61b2d72715b9ac 474 SMART SM00382 226 432 2.1E-4 T 15-10-2018 IPR003593 AAA+ ATPase domain AM378_17065 27c4c9d7cf7c7f8dad61b2d72715b9ac 474 SUPERFAMILY SSF52540 207 459 2.93E-52 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_17065 27c4c9d7cf7c7f8dad61b2d72715b9ac 474 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 29 467 3.8E-174 T 15-10-2018 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 AM378_17065 27c4c9d7cf7c7f8dad61b2d72715b9ac 474 SUPERFAMILY SSF48024 28 139 6.41E-38 T 15-10-2018 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily GO:0003678|GO:0005524|GO:0006260 AM378_17065 27c4c9d7cf7c7f8dad61b2d72715b9ac 474 Pfam PF03796 DnaB-like helicase C terminal domain 209 465 2.1E-111 T 15-10-2018 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 Reactome: R-HSA-2151201 AM378_17065 27c4c9d7cf7c7f8dad61b2d72715b9ac 474 Gene3D G3DSA:3.40.50.300 188 469 1.4E-103 T 15-10-2018 AM378_17065 27c4c9d7cf7c7f8dad61b2d72715b9ac 474 Pfam PF00772 DnaB-like helicase N terminal domain 30 131 1.6E-35 T 15-10-2018 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 AM378_17065 27c4c9d7cf7c7f8dad61b2d72715b9ac 474 Gene3D G3DSA:1.10.860.10 23 187 4.6E-54 T 15-10-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal AM378_06670 bb831982cbc784846a4b583fd0059c50 405 Pfam PF07690 Major Facilitator Superfamily 10 221 1.0E-24 T 15-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM378_06670 bb831982cbc784846a4b583fd0059c50 405 SUPERFAMILY SSF103473 6 382 4.45E-52 T 15-10-2018 IPR036259 MFS transporter superfamily AM378_06670 bb831982cbc784846a4b583fd0059c50 405 Gene3D G3DSA:1.20.1250.20 6 374 2.4E-42 T 15-10-2018 AM378_08220 79061ac3bb375a8676e61435491f4af0 335 SUPERFAMILY SSF53822 26 330 4.71E-63 T 15-10-2018 IPR028082 Periplasmic binding protein-like I AM378_08220 79061ac3bb375a8676e61435491f4af0 335 Pfam PF13407 Periplasmic binding protein domain 28 289 3.0E-42 T 15-10-2018 IPR025997 Periplasmic binding protein AM378_08220 79061ac3bb375a8676e61435491f4af0 335 Gene3D G3DSA:3.40.50.2300 130 269 1.2E-59 T 15-10-2018 AM378_08220 79061ac3bb375a8676e61435491f4af0 335 Gene3D G3DSA:3.40.50.2300 27 296 1.2E-59 T 15-10-2018 AM378_19635 e98b881558a2193b6b56cc404034f177 195 Gene3D G3DSA:3.40.50.740 107 195 5.3E-35 T 15-10-2018 AM378_19635 e98b881558a2193b6b56cc404034f177 195 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 44 103 1.7E-19 T 15-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM378_19635 e98b881558a2193b6b56cc404034f177 195 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 48 66 - T 15-10-2018 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 AM378_19635 e98b881558a2193b6b56cc404034f177 195 SMART SM00926 43 104 4.1E-22 T 15-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM378_19635 e98b881558a2193b6b56cc404034f177 195 Pfam PF00384 Molybdopterin oxidoreductase 107 139 3.8E-6 T 15-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM378_19635 e98b881558a2193b6b56cc404034f177 195 Gene3D G3DSA:2.20.25.90 44 105 1.5E-16 T 15-10-2018 AM378_19635 e98b881558a2193b6b56cc404034f177 195 SUPERFAMILY SSF53706 35 195 1.26E-56 T 15-10-2018 AM378_20880 85e17a91761d868297c39eaa13980986 574 Hamap MF_00399 Thiol:disulfide interchange protein DsbD [dsbD]. 1 573 39.992 T 15-10-2018 IPR022910 Thiol:disulphide interchange protein DsbD GO:0047134|GO:0055114 AM378_20880 85e17a91761d868297c39eaa13980986 574 Pfam PF11412 Disulphide bond corrector protein DsbC 34 143 6.8E-35 T 15-10-2018 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain AM378_20880 85e17a91761d868297c39eaa13980986 574 Pfam PF13899 Thioredoxin-like 470 546 2.7E-13 T 15-10-2018 AM378_20880 85e17a91761d868297c39eaa13980986 574 Gene3D G3DSA:3.40.30.10 448 573 1.2E-35 T 15-10-2018 AM378_20880 85e17a91761d868297c39eaa13980986 574 ProSitePatterns PS00194 Thioredoxin family active site. 481 499 - T 15-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 AM378_20880 85e17a91761d868297c39eaa13980986 574 SUPERFAMILY SSF74863 32 145 5.62E-42 T 15-10-2018 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily AM378_20880 85e17a91761d868297c39eaa13980986 574 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 179 384 3.6E-21 T 15-10-2018 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 AM378_20880 85e17a91761d868297c39eaa13980986 574 SUPERFAMILY SSF52833 458 571 1.36E-23 T 15-10-2018 IPR036249 Thioredoxin-like superfamily AM378_20880 85e17a91761d868297c39eaa13980986 574 Gene3D G3DSA:2.60.40.1250 23 160 3.9E-47 T 15-10-2018 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily AM378_15855 69a4ebdf0edf0d2a843d04f3cca9f652 305 Gene3D G3DSA:1.10.10.60 188 298 1.4E-27 T 15-10-2018 AM378_15855 69a4ebdf0edf0d2a843d04f3cca9f652 305 SUPERFAMILY SSF46689 192 243 2.21E-9 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AM378_15855 69a4ebdf0edf0d2a843d04f3cca9f652 305 Pfam PF06719 AraC-type transcriptional regulator N-terminus 28 180 1.1E-42 T 15-10-2018 IPR009594 Transcription regulator HTH, AraC, N-terminal AM378_15855 69a4ebdf0edf0d2a843d04f3cca9f652 305 SMART SM00342 209 292 2.2E-27 T 15-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM378_15855 69a4ebdf0edf0d2a843d04f3cca9f652 305 SUPERFAMILY SSF46689 245 293 6.72E-11 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AM378_15855 69a4ebdf0edf0d2a843d04f3cca9f652 305 Pfam PF12833 Helix-turn-helix domain 215 290 1.4E-21 T 15-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM378_23915 9f56b2886948a9086f37d0b9eae74431 89 Pfam PF03891 Domain of unknown function (DUF333) 38 84 3.7E-19 T 15-10-2018 IPR005590 Protein of unknown function DUF333 AM378_00500 686956bf1b5edc72a0cf6278de11d418 228 Gene3D G3DSA:3.40.50.300 4 228 2.0E-63 T 15-10-2018 AM378_00500 686956bf1b5edc72a0cf6278de11d418 228 Pfam PF00005 ABC transporter 27 174 6.5E-30 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM378_00500 686956bf1b5edc72a0cf6278de11d418 228 SMART SM00382 35 221 2.7E-12 T 15-10-2018 IPR003593 AAA+ ATPase domain AM378_00500 686956bf1b5edc72a0cf6278de11d418 228 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM378_00500 686956bf1b5edc72a0cf6278de11d418 228 SUPERFAMILY SSF52540 6 227 5.58E-63 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_17040 678acaeaf2274cda61b52bd133c2e588 138 Pfam PF01894 Uncharacterised protein family UPF0047 19 134 3.9E-37 T 15-10-2018 IPR001602 Uncharacterised protein family UPF0047 AM378_17040 678acaeaf2274cda61b52bd133c2e588 138 TIGRFAM TIGR00149 TIGR00149_YjbQ: secondary thiamine-phosphate synthase enzyme 4 138 2.1E-48 T 15-10-2018 IPR001602 Uncharacterised protein family UPF0047 AM378_17040 678acaeaf2274cda61b52bd133c2e588 138 SUPERFAMILY SSF111038 1 138 1.83E-47 T 15-10-2018 IPR035917 YjbQ-like superfamily AM378_17040 678acaeaf2274cda61b52bd133c2e588 138 Gene3D G3DSA:2.60.120.460 1 138 9.8E-42 T 15-10-2018 IPR035917 YjbQ-like superfamily AM378_17040 678acaeaf2274cda61b52bd133c2e588 138 ProSitePatterns PS01314 Uncharacterized protein family UPF0047 signature. 99 117 - T 15-10-2018 IPR001602 Uncharacterised protein family UPF0047 AM378_17040 678acaeaf2274cda61b52bd133c2e588 138 PIRSF PIRSF004681 1 138 1.7E-44 T 15-10-2018 IPR001602 Uncharacterised protein family UPF0047 AM378_11330 c52a4d6c62e162a7e0ff64007d461dbc 357 Pfam PF03601 Conserved hypothetical protein 698 24 335 5.4E-107 T 15-10-2018 IPR018383 Uncharacterised protein family UPF0324, prokaryote GO:0016021 AM378_11330 c52a4d6c62e162a7e0ff64007d461dbc 357 TIGRFAM TIGR00698 TIGR00698: conserved hypothetical protein 23 355 7.4E-130 T 15-10-2018 IPR004630 Uncharacterised protein family UPF0324, bacteria GO:0016021 AM378_09905 ccd54b0fbc6dca1a07cfa81c9d70f3eb 176 Gene3D G3DSA:2.60.40.4150 28 176 9.4E-58 T 15-10-2018 IPR038706 Type VI secretion protein SciN-like superfamily AM378_09905 ccd54b0fbc6dca1a07cfa81c9d70f3eb 176 Pfam PF12790 Type VI secretion lipoprotein, VasD, EvfM, TssJ, VC_A0113 21 150 2.1E-33 T 15-10-2018 IPR017734 Type VI secretion system, lipoprotein SciN AM378_09905 ccd54b0fbc6dca1a07cfa81c9d70f3eb 176 TIGRFAM TIGR03352 VI_chp_3: type VI secretion lipoprotein, VC_A0113 family 14 144 8.6E-33 T 15-10-2018 IPR017734 Type VI secretion system, lipoprotein SciN AM378_02235 c4da1a345df67ee4a779790faf1db816 88 Gene3D G3DSA:1.20.120.910 1 73 1.8E-22 T 15-10-2018 AM378_02235 c4da1a345df67ee4a779790faf1db816 88 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 36 68 5.2E-13 T 15-10-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 AM378_02235 c4da1a345df67ee4a779790faf1db816 88 SUPERFAMILY SSF57716 38 71 6.13E-6 T 15-10-2018 AM378_08250 1b4afc22666e82334d0bb574852b82a0 107 SUPERFAMILY SSF102816 1 107 3.66E-51 T 15-10-2018 IPR036763 Putative dsDNA mimic superfamily AM378_08250 1b4afc22666e82334d0bb574852b82a0 107 PIRSF PIRSF004916 1 107 7.3E-55 T 15-10-2018 IPR007376 dsDNA mimic, putative AM378_08250 1b4afc22666e82334d0bb574852b82a0 107 ProDom PD020447 UPF0263 YCIU HD0986 VV1228 UNCHARACTERIZED 3D-STRUCTURE VV13059 BCR PM0536 VC1208 5 107 3.0E-51 T 15-10-2018 IPR007376 dsDNA mimic, putative AM378_08250 1b4afc22666e82334d0bb574852b82a0 107 Gene3D G3DSA:3.10.450.140 7 107 2.1E-41 T 15-10-2018 IPR036763 Putative dsDNA mimic superfamily AM378_08250 1b4afc22666e82334d0bb574852b82a0 107 Pfam PF04269 Protein of unknown function, DUF440 6 107 1.4E-45 T 15-10-2018 IPR007376 dsDNA mimic, putative AM378_08250 1b4afc22666e82334d0bb574852b82a0 107 Hamap MF_00680 UPF0263 protein YciU [yciU]. 3 107 34.031 T 15-10-2018 IPR007376 dsDNA mimic, putative AM378_09105 5f2c14375fe7c29521a267709600675a 338 SUPERFAMILY SSF51735 1 333 1.6E-62 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily AM378_09105 5f2c14375fe7c29521a267709600675a 338 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 233 4.2E-28 T 15-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 AM378_09105 5f2c14375fe7c29521a267709600675a 338 Gene3D G3DSA:3.40.50.720 1 336 3.0E-65 T 15-10-2018 AM378_16580 11c61cb1702ce65c8436d1d09b7aa440 456 Pfam PF13180 PDZ domain 279 359 4.5E-17 T 15-10-2018 IPR001478 PDZ domain GO:0005515 AM378_16580 11c61cb1702ce65c8436d1d09b7aa440 456 Gene3D G3DSA:2.30.42.10 266 366 8.7E-30 T 15-10-2018 AM378_16580 11c61cb1702ce65c8436d1d09b7aa440 456 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 378 444 1.1E-10 T 15-10-2018 IPR001478 PDZ domain GO:0005515 AM378_16580 11c61cb1702ce65c8436d1d09b7aa440 456 Pfam PF13365 Trypsin-like peptidase domain 93 229 9.7E-32 T 15-10-2018 AM378_16580 11c61cb1702ce65c8436d1d09b7aa440 456 SMART SM00228 381 448 4.1E-8 T 15-10-2018 IPR001478 PDZ domain GO:0005515 AM378_16580 11c61cb1702ce65c8436d1d09b7aa440 456 SMART SM00228 268 350 3.1E-14 T 15-10-2018 IPR001478 PDZ domain GO:0005515 AM378_16580 11c61cb1702ce65c8436d1d09b7aa440 456 SUPERFAMILY SSF50156 378 455 4.21E-15 T 15-10-2018 IPR036034 PDZ superfamily GO:0005515 AM378_16580 11c61cb1702ce65c8436d1d09b7aa440 456 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 40 454 4.5E-161 T 15-10-2018 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 AM378_16580 11c61cb1702ce65c8436d1d09b7aa440 456 Gene3D G3DSA:2.40.10.120 38 262 9.7E-86 T 15-10-2018 AM378_16580 11c61cb1702ce65c8436d1d09b7aa440 456 Gene3D G3DSA:2.30.42.10 367 456 7.8E-25 T 15-10-2018 AM378_16580 11c61cb1702ce65c8436d1d09b7aa440 456 SUPERFAMILY SSF50494 38 264 5.83E-65 T 15-10-2018 IPR009003 Peptidase S1, PA clan AM378_16580 11c61cb1702ce65c8436d1d09b7aa440 456 SUPERFAMILY SSF50156 226 351 9.6E-25 T 15-10-2018 IPR036034 PDZ superfamily GO:0005515 AM378_16580 11c61cb1702ce65c8436d1d09b7aa440 456 PRINTS PR00834 HtrA/DegQ protease family signature 165 189 2.0E-58 T 15-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AM378_16580 11c61cb1702ce65c8436d1d09b7aa440 456 PRINTS PR00834 HtrA/DegQ protease family signature 103 115 2.0E-58 T 15-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AM378_16580 11c61cb1702ce65c8436d1d09b7aa440 456 PRINTS PR00834 HtrA/DegQ protease family signature 308 320 2.0E-58 T 15-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AM378_16580 11c61cb1702ce65c8436d1d09b7aa440 456 PRINTS PR00834 HtrA/DegQ protease family signature 200 217 2.0E-58 T 15-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AM378_16580 11c61cb1702ce65c8436d1d09b7aa440 456 PRINTS PR00834 HtrA/DegQ protease family signature 222 239 2.0E-58 T 15-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AM378_16580 11c61cb1702ce65c8436d1d09b7aa440 456 PRINTS PR00834 HtrA/DegQ protease family signature 124 144 2.0E-58 T 15-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AM378_08445 4c7b194f7c26d784c96c9c3c5573d06d 291 SUPERFAMILY SSF74650 8 276 6.91E-71 T 15-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 AM378_08445 4c7b194f7c26d784c96c9c3c5573d06d 291 Pfam PF01263 Aldose 1-epimerase 29 276 1.4E-42 T 15-10-2018 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 AM378_08445 4c7b194f7c26d784c96c9c3c5573d06d 291 Gene3D G3DSA:2.70.98.10 1 288 1.7E-96 T 15-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 AM378_08445 4c7b194f7c26d784c96c9c3c5573d06d 291 PIRSF PIRSF016020 7 287 5.4E-57 T 15-10-2018 IPR025532 Glucose-6-phosphate 1-epimerase KEGG: 00010+5.1.3.15 AM378_02210 5433b028ce36611f9ebc4c2595b0fa74 434 Gene3D G3DSA:1.10.287.950 230 431 1.0E-46 T 15-10-2018 AM378_02210 5433b028ce36611f9ebc4c2595b0fa74 434 SUPERFAMILY SSF55785 23 127 1.5E-22 T 15-10-2018 IPR035965 PAS domain superfamily AM378_02210 5433b028ce36611f9ebc4c2595b0fa74 434 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 18 133 2.0E-13 T 15-10-2018 IPR000014 PAS domain AM378_02210 5433b028ce36611f9ebc4c2595b0fa74 434 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 139 254 2.2E-18 T 15-10-2018 IPR000014 PAS domain AM378_02210 5433b028ce36611f9ebc4c2595b0fa74 434 SMART SM00283 238 434 1.8E-11 T 15-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AM378_02210 5433b028ce36611f9ebc4c2595b0fa74 434 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 267 425 2.9E-33 T 15-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AM378_02210 5433b028ce36611f9ebc4c2595b0fa74 434 Pfam PF08448 PAS fold 145 248 4.2E-16 T 15-10-2018 IPR013656 PAS fold-4 AM378_02210 5433b028ce36611f9ebc4c2595b0fa74 434 SMART SM00086 207 249 8.4E-5 T 15-10-2018 IPR001610 PAC motif AM378_02210 5433b028ce36611f9ebc4c2595b0fa74 434 SMART SM00086 85 127 0.0077 T 15-10-2018 IPR001610 PAC motif AM378_02210 5433b028ce36611f9ebc4c2595b0fa74 434 SMART SM00091 132 202 2.3E-5 T 15-10-2018 IPR000014 PAS domain AM378_02210 5433b028ce36611f9ebc4c2595b0fa74 434 SMART SM00091 11 79 1.1 T 15-10-2018 IPR000014 PAS domain AM378_02210 5433b028ce36611f9ebc4c2595b0fa74 434 SUPERFAMILY SSF55785 142 246 6.12E-24 T 15-10-2018 IPR035965 PAS domain superfamily AM378_02210 5433b028ce36611f9ebc4c2595b0fa74 434 Gene3D G3DSA:3.30.450.20 129 224 4.6E-5 T 15-10-2018 AM378_02210 5433b028ce36611f9ebc4c2595b0fa74 434 Pfam PF08447 PAS fold 35 121 3.9E-13 T 15-10-2018 IPR013655 PAS fold-3 GO:0005515 AM378_02210 5433b028ce36611f9ebc4c2595b0fa74 434 SUPERFAMILY SSF58104 215 426 2.22E-49 T 15-10-2018 AM378_02210 5433b028ce36611f9ebc4c2595b0fa74 434 Gene3D G3DSA:3.30.450.20 5 121 7.6E-21 T 15-10-2018 AM378_13125 40e4d6fed5f36975c44c6b0d8a96f901 301 Hamap MF_01377 Probable lipid kinase YegS [yegS]. 8 301 45.517 T 15-10-2018 IPR022433 Lipid kinase YegS GO:0001727|GO:0046872 AM378_13125 40e4d6fed5f36975c44c6b0d8a96f901 301 Gene3D G3DSA:2.60.200.40 128 286 5.6E-87 T 15-10-2018 AM378_13125 40e4d6fed5f36975c44c6b0d8a96f901 301 TIGRFAM TIGR00147 TIGR00147: lipid kinase, YegS/Rv2252/BmrU family 10 295 6.3E-91 T 15-10-2018 IPR005218 Diacylglycerol/lipid kinase AM378_13125 40e4d6fed5f36975c44c6b0d8a96f901 301 SMART SM00046 8 131 3.3E-24 T 15-10-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 AM378_13125 40e4d6fed5f36975c44c6b0d8a96f901 301 Pfam PF00781 Diacylglycerol kinase catalytic domain 9 131 2.1E-30 T 15-10-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 AM378_13125 40e4d6fed5f36975c44c6b0d8a96f901 301 TIGRFAM TIGR03702 lip_kinase_YegS: lipid kinase YegS 9 300 6.8E-137 T 15-10-2018 IPR022433 Lipid kinase YegS GO:0001727|GO:0046872 AM378_13125 40e4d6fed5f36975c44c6b0d8a96f901 301 SUPERFAMILY SSF111331 8 297 8.28E-70 T 15-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily AM378_13125 40e4d6fed5f36975c44c6b0d8a96f901 301 Gene3D G3DSA:3.40.50.10330 27 289 5.6E-87 T 15-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 AM378_08990 b3301b90514d5b0d81e28c81e61c1856 148 SMART SM00749 28 91 1.5E-6 T 15-10-2018 IPR014004 Transport-associated and nodulation domain, bacteria AM378_08990 b3301b90514d5b0d81e28c81e61c1856 148 Gene3D G3DSA:3.10.350.10 98 146 3.3E-15 T 15-10-2018 IPR036779 LysM domain superfamily AM378_08990 b3301b90514d5b0d81e28c81e61c1856 148 SMART SM00257 98 147 7.1E-14 T 15-10-2018 IPR018392 LysM domain AM378_08990 b3301b90514d5b0d81e28c81e61c1856 148 Pfam PF04972 BON domain 29 90 2.0E-11 T 15-10-2018 IPR007055 BON domain AM378_08990 b3301b90514d5b0d81e28c81e61c1856 148 SUPERFAMILY SSF54106 97 147 2.22E-8 T 15-10-2018 AM378_08990 b3301b90514d5b0d81e28c81e61c1856 148 Pfam PF01476 LysM domain 99 147 1.8E-14 T 15-10-2018 IPR018392 LysM domain AM378_10070 c17d742af916bd86b1b67e821c13f3a0 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 158 177 4.7E-10 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_10070 c17d742af916bd86b1b67e821c13f3a0 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 4.7E-10 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_10070 c17d742af916bd86b1b67e821c13f3a0 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 137 145 4.7E-10 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_10070 c17d742af916bd86b1b67e821c13f3a0 253 SUPERFAMILY SSF51735 1 251 1.24E-69 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily AM378_10070 c17d742af916bd86b1b67e821c13f3a0 253 Gene3D G3DSA:3.40.50.720 1 251 5.9E-67 T 15-10-2018 AM378_10070 c17d742af916bd86b1b67e821c13f3a0 253 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 250 1.3E-54 T 15-10-2018 AM378_10070 c17d742af916bd86b1b67e821c13f3a0 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 179 196 9.1E-40 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_10070 c17d742af916bd86b1b67e821c13f3a0 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 158 177 9.1E-40 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_10070 c17d742af916bd86b1b67e821c13f3a0 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 9.1E-40 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_10070 c17d742af916bd86b1b67e821c13f3a0 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 9.1E-40 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_10070 c17d742af916bd86b1b67e821c13f3a0 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 131 147 9.1E-40 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_10070 c17d742af916bd86b1b67e821c13f3a0 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 214 234 9.1E-40 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_14500 87072eceeda0a3337c7919715ff8e346 264 Pfam PF00303 Thymidylate synthase 2 264 6.3E-127 T 15-10-2018 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 AM378_14500 87072eceeda0a3337c7919715ff8e346 264 PRINTS PR00108 Thymidylate synthase family signature 115 134 1.0E-46 T 15-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 AM378_14500 87072eceeda0a3337c7919715ff8e346 264 PRINTS PR00108 Thymidylate synthase family signature 197 214 1.0E-46 T 15-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 AM378_14500 87072eceeda0a3337c7919715ff8e346 264 PRINTS PR00108 Thymidylate synthase family signature 159 185 1.0E-46 T 15-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 AM378_14500 87072eceeda0a3337c7919715ff8e346 264 PRINTS PR00108 Thymidylate synthase family signature 141 156 1.0E-46 T 15-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 AM378_14500 87072eceeda0a3337c7919715ff8e346 264 PRINTS PR00108 Thymidylate synthase family signature 42 63 1.0E-46 T 15-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 AM378_14500 87072eceeda0a3337c7919715ff8e346 264 SUPERFAMILY SSF55831 1 264 1.96E-131 T 15-10-2018 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 AM378_14500 87072eceeda0a3337c7919715ff8e346 264 Gene3D G3DSA:3.30.572.10 1 264 5.7E-135 T 15-10-2018 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 AM378_14500 87072eceeda0a3337c7919715ff8e346 264 ProSitePatterns PS00091 Thymidylate synthase active site. 126 154 - T 15-10-2018 IPR020940 Thymidylate synthase, active site GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 AM378_14500 87072eceeda0a3337c7919715ff8e346 264 Hamap MF_00008 Thymidylate synthase [thyA]. 1 264 39.617 T 15-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 AM378_14500 87072eceeda0a3337c7919715ff8e346 264 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 84 264 7.8E-94 T 15-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 AM378_14500 87072eceeda0a3337c7919715ff8e346 264 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 2 85 2.2E-41 T 15-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 AM378_21475 4c9bdd6cd05c7d324fc5a2ac993e2e98 210 SUPERFAMILY SSF51735 2 196 3.11E-38 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily AM378_21475 4c9bdd6cd05c7d324fc5a2ac993e2e98 210 Gene3D G3DSA:3.40.50.720 1 208 1.4E-53 T 15-10-2018 AM378_21475 4c9bdd6cd05c7d324fc5a2ac993e2e98 210 SMART SM00859 3 95 0.0039 T 15-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 AM378_21475 4c9bdd6cd05c7d324fc5a2ac993e2e98 210 Pfam PF13460 NAD(P)H-binding 8 191 1.7E-9 T 15-10-2018 IPR016040 NAD(P)-binding domain AM378_08310 4252a222f9d49fae26099b6658735077 447 PIRSF PIRSF500134 1 442 2.5E-194 T 15-10-2018 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|MetaCyc: PWY-7820 AM378_08310 4252a222f9d49fae26099b6658735077 447 PIRSF PIRSF000124 1 439 1.1E-152 T 15-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 AM378_08310 4252a222f9d49fae26099b6658735077 447 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 1 420 1.1E-141 T 15-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 AM378_08310 4252a222f9d49fae26099b6658735077 447 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 204 295 2.3E-39 T 15-10-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 AM378_08310 4252a222f9d49fae26099b6658735077 447 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 1 183 6.0E-66 T 15-10-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 AM378_08310 4252a222f9d49fae26099b6658735077 447 Gene3D G3DSA:3.40.50.720 235 446 1.2E-78 T 15-10-2018 AM378_08310 4252a222f9d49fae26099b6658735077 447 Gene3D G3DSA:1.20.5.100 203 233 1.2E-17 T 15-10-2018 AM378_08310 4252a222f9d49fae26099b6658735077 447 Gene3D G3DSA:3.40.50.720 1 202 1.2E-80 T 15-10-2018 AM378_08310 4252a222f9d49fae26099b6658735077 447 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 320 424 5.7E-30 T 15-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 AM378_08310 4252a222f9d49fae26099b6658735077 447 SUPERFAMILY SSF51735 1 195 1.87E-58 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily AM378_08310 4252a222f9d49fae26099b6658735077 447 SUPERFAMILY SSF52413 310 435 4.19E-40 T 15-10-2018 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily Reactome: R-HSA-173599 AM378_08310 4252a222f9d49fae26099b6658735077 447 SUPERFAMILY SSF48179 203 301 1.11E-34 T 15-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 AM378_08310 4252a222f9d49fae26099b6658735077 447 SMART SM00984 320 424 6.3E-51 T 15-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 AM378_05140 bdac40d8c461f891bbba98fe5d4144a1 426 Pfam PF01266 FAD dependent oxidoreductase 29 381 6.5E-54 T 15-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 AM378_05140 bdac40d8c461f891bbba98fe5d4144a1 426 SUPERFAMILY SSF51905 27 329 1.99E-40 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AM378_05140 bdac40d8c461f891bbba98fe5d4144a1 426 Gene3D G3DSA:3.30.9.10 122 343 6.8E-73 T 15-10-2018 AM378_05140 bdac40d8c461f891bbba98fe5d4144a1 426 PRINTS PR00757 Flavin-containing amine oxidase signature 29 48 4.0E-5 T 15-10-2018 IPR001613 Flavin amine oxidase GO:0016491|GO:0055114 AM378_05140 bdac40d8c461f891bbba98fe5d4144a1 426 PRINTS PR00757 Flavin-containing amine oxidase signature 216 238 4.0E-5 T 15-10-2018 IPR001613 Flavin amine oxidase GO:0016491|GO:0055114 AM378_05140 bdac40d8c461f891bbba98fe5d4144a1 426 Gene3D G3DSA:3.50.50.60 29 382 6.8E-73 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AM378_15670 533af441061a5f450f93b63da17571d6 176 SUPERFAMILY SSF49401 26 176 5.97E-29 T 15-10-2018 IPR008966 Adhesion domain superfamily AM378_15670 533af441061a5f450f93b63da17571d6 176 Pfam PF00419 Fimbrial protein 29 175 1.7E-10 T 15-10-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM378_15670 533af441061a5f450f93b63da17571d6 176 Gene3D G3DSA:2.60.40.1090 26 175 3.2E-24 T 15-10-2018 IPR036937 Fimbrial-type adhesion domain superfamily GO:0007155|GO:0009289 AM378_23095 a46c70c7d93bb44331beaf84f384d9bc 475 SUPERFAMILY SSF52540 24 253 4.83E-58 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_23095 a46c70c7d93bb44331beaf84f384d9bc 475 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 34 215 7.0E-16 T 15-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 AM378_23095 a46c70c7d93bb44331beaf84f384d9bc 475 TIGRFAM TIGR02034 CysN: sulfate adenylyltransferase, large subunit 28 434 1.5E-207 T 15-10-2018 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 AM378_23095 a46c70c7d93bb44331beaf84f384d9bc 475 Gene3D G3DSA:2.40.30.10 241 328 2.2E-25 T 15-10-2018 AM378_23095 a46c70c7d93bb44331beaf84f384d9bc 475 Hamap MF_00062 Sulfate adenylyltransferase subunit 1 [cysN]. 19 475 54.463 T 15-10-2018 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 AM378_23095 a46c70c7d93bb44331beaf84f384d9bc 475 SUPERFAMILY SSF50465 336 435 5.28E-30 T 15-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal AM378_23095 a46c70c7d93bb44331beaf84f384d9bc 475 PRINTS PR00315 GTP-binding elongation factor signature 126 137 8.1E-14 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM378_23095 a46c70c7d93bb44331beaf84f384d9bc 475 PRINTS PR00315 GTP-binding elongation factor signature 163 172 8.1E-14 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM378_23095 a46c70c7d93bb44331beaf84f384d9bc 475 PRINTS PR00315 GTP-binding elongation factor signature 110 120 8.1E-14 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM378_23095 a46c70c7d93bb44331beaf84f384d9bc 475 PRINTS PR00315 GTP-binding elongation factor signature 29 42 8.1E-14 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM378_23095 a46c70c7d93bb44331beaf84f384d9bc 475 PRINTS PR00315 GTP-binding elongation factor signature 90 98 8.1E-14 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM378_23095 a46c70c7d93bb44331beaf84f384d9bc 475 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 83 98 - T 15-10-2018 IPR031157 Tr-type G domain, conserved site AM378_23095 a46c70c7d93bb44331beaf84f384d9bc 475 Gene3D G3DSA:3.40.50.300 7 240 9.2E-73 T 15-10-2018 AM378_23095 a46c70c7d93bb44331beaf84f384d9bc 475 Pfam PF00009 Elongation factor Tu GTP binding domain 27 231 1.0E-44 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM378_23095 a46c70c7d93bb44331beaf84f384d9bc 475 Gene3D G3DSA:2.40.30.10 332 434 6.9E-30 T 15-10-2018 AM378_23095 a46c70c7d93bb44331beaf84f384d9bc 475 SUPERFAMILY SSF50447 242 328 4.64E-24 T 15-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily AM378_14280 2b0ffb366e82e935b5b7df22114ad72c 808 Gene3D G3DSA:3.10.20.310 92 174 7.6E-16 T 15-10-2018 AM378_14280 2b0ffb366e82e935b5b7df22114ad72c 808 Gene3D G3DSA:3.10.20.310 19 91 4.8E-21 T 15-10-2018 AM378_14280 2b0ffb366e82e935b5b7df22114ad72c 808 Hamap MF_01430 Outer membrane protein assembly factor BamA [bamA]. 2 808 26.197 T 15-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 AM378_14280 2b0ffb366e82e935b5b7df22114ad72c 808 Gene3D G3DSA:2.40.160.50 426 808 1.8E-146 T 15-10-2018 AM378_14280 2b0ffb366e82e935b5b7df22114ad72c 808 TIGRFAM TIGR03303 OM_YaeT: outer membrane protein assembly complex, YaeT protein 24 808 2.8E-287 T 15-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 AM378_14280 2b0ffb366e82e935b5b7df22114ad72c 808 Gene3D G3DSA:3.10.20.310 265 346 3.2E-16 T 15-10-2018 AM378_14280 2b0ffb366e82e935b5b7df22114ad72c 808 Gene3D G3DSA:3.10.20.310 347 425 1.1E-26 T 15-10-2018 AM378_14280 2b0ffb366e82e935b5b7df22114ad72c 808 Pfam PF07244 Surface antigen variable number repeat 92 172 6.8E-11 T 15-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 AM378_14280 2b0ffb366e82e935b5b7df22114ad72c 808 Pfam PF07244 Surface antigen variable number repeat 176 263 4.1E-15 T 15-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 AM378_14280 2b0ffb366e82e935b5b7df22114ad72c 808 Pfam PF07244 Surface antigen variable number repeat 266 344 1.1E-10 T 15-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 AM378_14280 2b0ffb366e82e935b5b7df22114ad72c 808 Pfam PF07244 Surface antigen variable number repeat 348 421 5.4E-15 T 15-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 AM378_14280 2b0ffb366e82e935b5b7df22114ad72c 808 Gene3D G3DSA:3.10.20.310 175 264 1.2E-23 T 15-10-2018 AM378_14280 2b0ffb366e82e935b5b7df22114ad72c 808 Pfam PF01103 Surface antigen 448 808 1.4E-99 T 15-10-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 AM378_14280 2b0ffb366e82e935b5b7df22114ad72c 808 PIRSF PIRSF006076 1 808 2.3E-256 T 15-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 AM378_19035 31979687d4d463ed2979725159c8f1c2 91 SMART SM01409 8 61 1.6E-16 T 15-10-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 AM378_19035 31979687d4d463ed2979725159c8f1c2 91 Pfam PF01192 RNA polymerase Rpb6 10 60 9.6E-17 T 15-10-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 AM378_19035 31979687d4d463ed2979725159c8f1c2 91 TIGRFAM TIGR00690 rpoZ: DNA-directed RNA polymerase, omega subunit 1 59 2.9E-29 T 15-10-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM378_19035 31979687d4d463ed2979725159c8f1c2 91 SUPERFAMILY SSF63562 1 79 1.15E-25 T 15-10-2018 IPR036161 RPB6/omega subunit-like superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 AM378_19035 31979687d4d463ed2979725159c8f1c2 91 Hamap MF_00366 DNA-directed RNA polymerase subunit omega [rpoZ]. 1 62 16.087 T 15-10-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM378_19035 31979687d4d463ed2979725159c8f1c2 91 Gene3D G3DSA:3.90.940.10 1 91 1.9E-30 T 15-10-2018 IPR012293 RNA polymerase subunit, RPB6/omega GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 AM378_09345 34dbbb66e27eb2664e17183a3a492bb0 116 Pfam PF04965 Gene 25-like lysozyme 19 100 3.1E-15 T 15-10-2018 IPR007048 GpW/Gp25/anti-adapter protein IraD AM378_09345 34dbbb66e27eb2664e17183a3a492bb0 116 Gene3D G3DSA:3.10.450.40 5 115 6.9E-20 T 15-10-2018 AM378_09345 34dbbb66e27eb2664e17183a3a492bb0 116 SUPERFAMILY SSF160719 13 104 2.35E-27 T 15-10-2018 AM378_18865 33328396bb28b1439573b8d35f235bdf 444 SUPERFAMILY SSF51261 268 442 1.83E-45 T 15-10-2018 IPR011055 Duplicated hybrid motif AM378_18865 33328396bb28b1439573b8d35f235bdf 444 Pfam PF01551 Peptidase family M23 345 438 6.9E-25 T 15-10-2018 IPR016047 Peptidase M23 AM378_18865 33328396bb28b1439573b8d35f235bdf 444 Gene3D G3DSA:2.70.70.10 304 444 3.4E-38 T 15-10-2018 IPR011055 Duplicated hybrid motif AM378_09365 de85b051f47b482122a90d37cb4f6287 148 Pfam PF05069 Phage virion morphogenesis family 3 144 6.5E-37 T 15-10-2018 IPR006522 Phage virion morphogensis protein AM378_09365 de85b051f47b482122a90d37cb4f6287 148 TIGRFAM TIGR01635 tail_comp_S: phage virion morphogenesis protein 8 144 2.9E-39 T 15-10-2018 IPR006522 Phage virion morphogensis protein AM378_21055 20b780c71d905f05307f597e69b9c001 334 TIGRFAM TIGR01932 hflC: HflC protein 1 327 6.8E-138 T 15-10-2018 IPR010200 HflC GO:0016021|GO:0052547 AM378_21055 20b780c71d905f05307f597e69b9c001 334 PIRSF PIRSF005651 1 334 5.6E-106 T 15-10-2018 IPR010200 HflC GO:0016021|GO:0052547 AM378_21055 20b780c71d905f05307f597e69b9c001 334 SMART SM00244 18 227 5.6E-45 T 15-10-2018 IPR001107 Band 7 domain AM378_21055 20b780c71d905f05307f597e69b9c001 334 SUPERFAMILY SSF117892 197 233 5.36E-8 T 15-10-2018 IPR036013 Band 7/SPFH domain superfamily AM378_21055 20b780c71d905f05307f597e69b9c001 334 Pfam PF01145 SPFH domain / Band 7 family 22 243 3.8E-34 T 15-10-2018 IPR001107 Band 7 domain AM378_21055 20b780c71d905f05307f597e69b9c001 334 Gene3D G3DSA:3.30.479.30 53 185 9.1E-13 T 15-10-2018 AM378_21055 20b780c71d905f05307f597e69b9c001 334 SUPERFAMILY SSF117892 56 169 1.11E-17 T 15-10-2018 IPR036013 Band 7/SPFH domain superfamily AM378_21995 50bac6abc6efafb6ebad935f3c0878f2 747 Pfam PF00593 TonB dependent receptor 244 745 3.9E-42 T 15-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel AM378_21995 50bac6abc6efafb6ebad935f3c0878f2 747 Gene3D G3DSA:2.170.130.10 50 168 1.5E-10 T 15-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily AM378_21995 50bac6abc6efafb6ebad935f3c0878f2 747 Gene3D G3DSA:2.40.170.20 169 747 1.0E-72 T 15-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AM378_21995 50bac6abc6efafb6ebad935f3c0878f2 747 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 730 747 - T 15-10-2018 IPR010917 TonB-dependent receptor, conserved site AM378_21995 50bac6abc6efafb6ebad935f3c0878f2 747 SUPERFAMILY SSF56935 21 747 6.96E-93 T 15-10-2018 AM378_21995 50bac6abc6efafb6ebad935f3c0878f2 747 Pfam PF07715 TonB-dependent Receptor Plug Domain 48 146 3.3E-12 T 15-10-2018 IPR012910 TonB-dependent receptor, plug domain AM378_00975 54f74420f1fd173b596007b7f212a6da 310 Gene3D G3DSA:2.40.100.10 170 310 2.6E-54 T 15-10-2018 IPR029000 Cyclophilin-like domain superfamily AM378_00975 54f74420f1fd173b596007b7f212a6da 310 SUPERFAMILY SSF50891 173 289 2.39E-12 T 15-10-2018 IPR029000 Cyclophilin-like domain superfamily AM378_00975 54f74420f1fd173b596007b7f212a6da 310 Pfam PF02626 Carboxyltransferase domain, subdomain A and B 24 282 1.7E-94 T 15-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B AM378_00975 54f74420f1fd173b596007b7f212a6da 310 TIGRFAM TIGR00724 urea_amlyse_rel: biotin-dependent carboxylase uncharacterized domain 1 309 1.4E-121 T 15-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B AM378_00975 54f74420f1fd173b596007b7f212a6da 310 SMART SM00797 23 299 7.8E-151 T 15-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B AM378_22155 3b55630e22f3adcf0dd281de24e90fdd 456 Gene3D G3DSA:1.20.1250.20 16 451 1.4E-75 T 15-10-2018 AM378_22155 3b55630e22f3adcf0dd281de24e90fdd 456 TIGRFAM TIGR02332 HpaX: 4-hydroxyphenylacetate permease 26 437 7.0E-253 T 15-10-2018 IPR012707 4-hydroxyphenylacetate permease GO:1900754|GO:1901241 AM378_22155 3b55630e22f3adcf0dd281de24e90fdd 456 SUPERFAMILY SSF103473 20 448 4.05E-84 T 15-10-2018 IPR036259 MFS transporter superfamily AM378_22155 3b55630e22f3adcf0dd281de24e90fdd 456 Pfam PF07690 Major Facilitator Superfamily 38 387 1.2E-46 T 15-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM378_14255 2d3d9a50767c1cfd3166fa7517dfd2a5 382 Pfam PF02684 Lipid-A-disaccharide synthetase 8 376 3.4E-145 T 15-10-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 AM378_14255 2d3d9a50767c1cfd3166fa7517dfd2a5 382 SUPERFAMILY SSF53756 8 305 2.09E-26 T 15-10-2018 AM378_14255 2d3d9a50767c1cfd3166fa7517dfd2a5 382 TIGRFAM TIGR00215 lpxB: lipid-A-disaccharide synthase 3 379 4.9E-173 T 15-10-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 AM378_14255 2d3d9a50767c1cfd3166fa7517dfd2a5 382 Hamap MF_00392 Lipid-A-disaccharide synthase [lpxB]. 5 381 43.221 T 15-10-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 AM378_04830 69355e5816574287fc8c0b531b7c6336 361 Gene3D G3DSA:3.30.160.20 210 297 1.4E-94 T 15-10-2018 AM378_04830 69355e5816574287fc8c0b531b7c6336 361 TIGRFAM TIGR00019 prfA: peptide chain release factor 1 1 357 1.2E-175 T 15-10-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 AM378_04830 69355e5816574287fc8c0b531b7c6336 361 Gene3D G3DSA:3.30.70.1660 111 342 1.4E-94 T 15-10-2018 AM378_04830 69355e5816574287fc8c0b531b7c6336 361 Pfam PF03462 PCRF domain 12 203 6.6E-76 T 15-10-2018 IPR005139 Peptide chain release factor GO:0006415 AM378_04830 69355e5816574287fc8c0b531b7c6336 361 Pfam PF00472 RF-1 domain 216 321 1.2E-40 T 15-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 AM378_04830 69355e5816574287fc8c0b531b7c6336 361 Gene3D G3DSA:1.20.58.410 4 101 8.7E-6 T 15-10-2018 AM378_04830 69355e5816574287fc8c0b531b7c6336 361 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 228 244 - T 15-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 AM378_04830 69355e5816574287fc8c0b531b7c6336 361 Hamap MF_00093 Peptide chain release factor 1 [prfA]. 5 357 41.371 T 15-10-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 AM378_04830 69355e5816574287fc8c0b531b7c6336 361 SUPERFAMILY SSF75620 12 353 7.32E-137 T 15-10-2018 AM378_04830 69355e5816574287fc8c0b531b7c6336 361 SMART SM00937 63 178 9.3E-72 T 15-10-2018 IPR005139 Peptide chain release factor GO:0006415 AM378_06710 0aa2e7e4c612fc8bd2f6b7161e2f2fc2 262 SUPERFAMILY SSF53335 16 239 8.28E-40 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM378_06710 0aa2e7e4c612fc8bd2f6b7161e2f2fc2 262 Pfam PF01564 Spermine/spermidine synthase domain 76 208 9.2E-5 T 15-10-2018 AM378_06710 0aa2e7e4c612fc8bd2f6b7161e2f2fc2 262 Gene3D G3DSA:3.40.50.150 31 241 1.1E-43 T 15-10-2018 AM378_03410 d2c86f96dd5e89cda7ef1e80a8cd505b 164 ProSitePatterns PS00519 AsnC-type HTH domain signature. 30 56 - T 15-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site AM378_03410 d2c86f96dd5e89cda7ef1e80a8cd505b 164 Pfam PF13412 Winged helix-turn-helix DNA-binding 12 58 4.7E-21 T 15-10-2018 AM378_03410 d2c86f96dd5e89cda7ef1e80a8cd505b 164 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 12 28 6.2E-23 T 15-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 AM378_03410 d2c86f96dd5e89cda7ef1e80a8cd505b 164 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 28 39 6.2E-23 T 15-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 AM378_03410 d2c86f96dd5e89cda7ef1e80a8cd505b 164 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 39 58 6.2E-23 T 15-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 AM378_03410 d2c86f96dd5e89cda7ef1e80a8cd505b 164 Gene3D G3DSA:1.10.10.10 1 65 3.2E-32 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_03410 d2c86f96dd5e89cda7ef1e80a8cd505b 164 Pfam PF01037 Lrp/AsnC ligand binding domain 78 152 1.2E-24 T 15-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain AM378_03410 d2c86f96dd5e89cda7ef1e80a8cd505b 164 SUPERFAMILY SSF54909 74 157 4.29E-22 T 15-10-2018 IPR011008 Dimeric alpha-beta barrel AM378_03410 d2c86f96dd5e89cda7ef1e80a8cd505b 164 Gene3D G3DSA:3.30.70.920 66 149 3.1E-25 T 15-10-2018 AM378_03410 d2c86f96dd5e89cda7ef1e80a8cd505b 164 SUPERFAMILY SSF46785 12 70 8.35E-19 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM378_03410 d2c86f96dd5e89cda7ef1e80a8cd505b 164 SMART SM00344 12 121 3.0E-54 T 15-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 AM378_10985 6393eff8704ff91efd947e7059e8c9b1 228 Gene3D G3DSA:2.60.120.330 16 207 1.4E-36 T 15-10-2018 IPR027443 Isopenicillin N synthase-like AM378_10985 6393eff8704ff91efd947e7059e8c9b1 228 Pfam PF05118 Aspartyl/Asparaginyl beta-hydroxylase 40 199 2.3E-40 T 15-10-2018 IPR007803 Aspartyl/asparaginy/proline hydroxylase GO:0018193 AM378_10985 6393eff8704ff91efd947e7059e8c9b1 228 SUPERFAMILY SSF51197 72 204 1.65E-17 T 15-10-2018 AM378_17775 03e7b7a6c3e868944afa318d6ee1de41 849 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 632 767 1.8E-14 T 15-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AM378_17775 03e7b7a6c3e868944afa318d6ee1de41 849 SUPERFAMILY SSF51905 1 137 1.04E-18 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AM378_17775 03e7b7a6c3e868944afa318d6ee1de41 849 SUPERFAMILY SSF55124 501 626 4.09E-31 T 15-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AM378_17775 03e7b7a6c3e868944afa318d6ee1de41 849 Gene3D G3DSA:1.10.10.1100 422 476 4.4E-12 T 15-10-2018 AM378_17775 03e7b7a6c3e868944afa318d6ee1de41 849 PRINTS PR00397 Sirohaem Fe-binding site signature 635 653 7.9E-6 T 15-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AM378_17775 03e7b7a6c3e868944afa318d6ee1de41 849 PRINTS PR00397 Sirohaem Fe-binding site signature 678 696 7.9E-6 T 15-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AM378_17775 03e7b7a6c3e868944afa318d6ee1de41 849 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 261 283 2.6E-12 T 15-10-2018 AM378_17775 03e7b7a6c3e868944afa318d6ee1de41 849 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 102 120 2.6E-12 T 15-10-2018 AM378_17775 03e7b7a6c3e868944afa318d6ee1de41 849 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 147 165 2.6E-12 T 15-10-2018 AM378_17775 03e7b7a6c3e868944afa318d6ee1de41 849 PIRSF PIRSF037149 1 834 0.0 T 15-10-2018 IPR017121 Nitrite reductase [NAD(P)H], large subunit GO:0042128 AM378_17775 03e7b7a6c3e868944afa318d6ee1de41 849 Gene3D G3DSA:3.50.50.60 8 283 2.0E-82 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AM378_17775 03e7b7a6c3e868944afa318d6ee1de41 849 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 559 621 2.5E-11 T 15-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AM378_17775 03e7b7a6c3e868944afa318d6ee1de41 849 SUPERFAMILY SSF56014 632 808 1.57E-47 T 15-10-2018 AM378_17775 03e7b7a6c3e868944afa318d6ee1de41 849 SUPERFAMILY SSF51905 104 311 7.6E-40 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AM378_17775 03e7b7a6c3e868944afa318d6ee1de41 849 Pfam PF04324 BFD-like [2Fe-2S] binding domain 423 470 7.2E-15 T 15-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain AM378_17775 03e7b7a6c3e868944afa318d6ee1de41 849 Gene3D G3DSA:3.50.50.60 110 246 2.0E-82 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AM378_17775 03e7b7a6c3e868944afa318d6ee1de41 849 Gene3D G3DSA:3.30.413.10 631 792 1.2E-30 T 15-10-2018 AM378_17775 03e7b7a6c3e868944afa318d6ee1de41 849 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 105 114 3.1E-9 T 15-10-2018 AM378_17775 03e7b7a6c3e868944afa318d6ee1de41 849 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 276 283 3.1E-9 T 15-10-2018 AM378_17775 03e7b7a6c3e868944afa318d6ee1de41 849 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 147 172 3.1E-9 T 15-10-2018 AM378_17775 03e7b7a6c3e868944afa318d6ee1de41 849 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 292 6.9E-52 T 15-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM378_17775 03e7b7a6c3e868944afa318d6ee1de41 849 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 678 694 - T 15-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AM378_17775 03e7b7a6c3e868944afa318d6ee1de41 849 TIGRFAM TIGR02374 nitri_red_nirB: nitrite reductase [NAD(P)H], large subunit 6 800 0.0 T 15-10-2018 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB GO:0008942|GO:0042128|GO:0050660|GO:0050661|GO:0055114 AM378_07065 f0110cb14d0925fc77a1cecbbc6b9bbe 119 Gene3D G3DSA:1.10.10.10 14 119 3.0E-33 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_07065 f0110cb14d0925fc77a1cecbbc6b9bbe 119 Pfam PF01638 HxlR-like helix-turn-helix 25 115 2.6E-29 T 15-10-2018 IPR002577 Helix-turn-helix, HxlR type AM378_07065 f0110cb14d0925fc77a1cecbbc6b9bbe 119 SUPERFAMILY SSF46785 17 114 1.82E-29 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM378_06815 58b3f36c5fc9bd0c4e845fda250b42e3 345 SUPERFAMILY SSF51679 1 344 2.24E-78 T 15-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 AM378_06815 58b3f36c5fc9bd0c4e845fda250b42e3 345 Pfam PF00296 Luciferase-like monooxygenase 1 314 1.2E-53 T 15-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 AM378_06815 58b3f36c5fc9bd0c4e845fda250b42e3 345 Gene3D G3DSA:3.20.20.30 1 345 1.0E-80 T 15-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 AM378_17165 a95e13f4ad7ac86f49e3aa4ec2c305d7 397 Pfam PF13416 Bacterial extracellular solute-binding protein 51 345 1.5E-41 T 15-10-2018 IPR006059 Bacterial extracellular solute-binding protein AM378_17165 a95e13f4ad7ac86f49e3aa4ec2c305d7 397 Gene3D G3DSA:3.40.190.10 49 358 1.5E-147 T 15-10-2018 AM378_17165 a95e13f4ad7ac86f49e3aa4ec2c305d7 397 PRINTS PR00181 Maltose binding protein signature 152 171 9.7E-91 T 15-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 AM378_17165 a95e13f4ad7ac86f49e3aa4ec2c305d7 397 PRINTS PR00181 Maltose binding protein signature 71 89 9.7E-91 T 15-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 AM378_17165 a95e13f4ad7ac86f49e3aa4ec2c305d7 397 PRINTS PR00181 Maltose binding protein signature 172 191 9.7E-91 T 15-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 AM378_17165 a95e13f4ad7ac86f49e3aa4ec2c305d7 397 PRINTS PR00181 Maltose binding protein signature 37 55 9.7E-91 T 15-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 AM378_17165 a95e13f4ad7ac86f49e3aa4ec2c305d7 397 PRINTS PR00181 Maltose binding protein signature 358 377 9.7E-91 T 15-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 AM378_17165 a95e13f4ad7ac86f49e3aa4ec2c305d7 397 PRINTS PR00181 Maltose binding protein signature 234 253 9.7E-91 T 15-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 AM378_17165 a95e13f4ad7ac86f49e3aa4ec2c305d7 397 PRINTS PR00181 Maltose binding protein signature 131 150 9.7E-91 T 15-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 AM378_17165 a95e13f4ad7ac86f49e3aa4ec2c305d7 397 PRINTS PR00181 Maltose binding protein signature 300 321 9.7E-91 T 15-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 AM378_17165 a95e13f4ad7ac86f49e3aa4ec2c305d7 397 SUPERFAMILY SSF53850 30 396 6.21E-95 T 15-10-2018 AM378_17165 a95e13f4ad7ac86f49e3aa4ec2c305d7 397 Gene3D G3DSA:3.40.190.10 139 389 1.5E-147 T 15-10-2018 AM378_19610 e8d0e1d0362f1694f5fd3c78141dd0e6 120 Pfam PF10928 Protein of unknown function (DUF2810) 66 118 2.1E-32 T 15-10-2018 IPR021230 Protein of unknown function DUF2810 AM378_19610 e8d0e1d0362f1694f5fd3c78141dd0e6 120 Gene3D G3DSA:3.30.1370.150 61 120 2.6E-34 T 15-10-2018 AM378_19610 e8d0e1d0362f1694f5fd3c78141dd0e6 120 Gene3D G3DSA:4.10.860.10 1 60 7.1E-17 T 15-10-2018 AM378_02705 74fcdc2af110c44f8197c772768bca37 527 SMART SM00116 376 424 6.6 T 15-10-2018 IPR000644 CBS domain AM378_02705 74fcdc2af110c44f8197c772768bca37 527 SMART SM00116 313 363 3.0 T 15-10-2018 IPR000644 CBS domain AM378_02705 74fcdc2af110c44f8197c772768bca37 527 SUPERFAMILY SSF56176 439 524 1.09E-21 T 15-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 AM378_02705 74fcdc2af110c44f8197c772768bca37 527 Gene3D G3DSA:3.10.580.10 285 436 2.1E-39 T 15-10-2018 AM378_02705 74fcdc2af110c44f8197c772768bca37 527 SMART SM01091 441 520 1.5E-26 T 15-10-2018 IPR005170 Transporter-associated domain AM378_02705 74fcdc2af110c44f8197c772768bca37 527 SUPERFAMILY SSF54631 292 426 3.78E-25 T 15-10-2018 AM378_02705 74fcdc2af110c44f8197c772768bca37 527 Pfam PF00571 CBS domain 375 424 6.4E-7 T 15-10-2018 IPR000644 CBS domain AM378_02705 74fcdc2af110c44f8197c772768bca37 527 Pfam PF03741 Integral membrane protein TerC family 15 203 3.5E-50 T 15-10-2018 IPR005496 Integral membrane protein TerC GO:0016021 AM378_02705 74fcdc2af110c44f8197c772768bca37 527 Gene3D G3DSA:3.30.465.10 437 518 1.4E-20 T 15-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 AM378_02705 74fcdc2af110c44f8197c772768bca37 527 Pfam PF03471 Transporter associated domain 442 518 1.1E-18 T 15-10-2018 IPR005170 Transporter-associated domain AM378_10415 6efb6e73142baa9e4874b5af6d474753 304 Gene3D G3DSA:2.30.110.10 30 137 1.6E-5 T 15-10-2018 IPR012349 FMN-binding split barrel GO:0048037 AM378_10415 6efb6e73142baa9e4874b5af6d474753 304 Gene3D G3DSA:2.30.110.10 160 283 1.2E-10 T 15-10-2018 IPR012349 FMN-binding split barrel GO:0048037 AM378_10415 6efb6e73142baa9e4874b5af6d474753 304 SUPERFAMILY SSF50475 29 84 3.05E-5 T 15-10-2018 AM378_10415 6efb6e73142baa9e4874b5af6d474753 304 SUPERFAMILY SSF50475 202 255 4.8E-6 T 15-10-2018 AM378_10415 6efb6e73142baa9e4874b5af6d474753 304 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 160 256 4.2E-10 T 15-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 AM378_10415 6efb6e73142baa9e4874b5af6d474753 304 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 30 116 1.1E-5 T 15-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 AM378_06810 3e16c2485945c4090dc4cfe03617259a 309 Gene3D G3DSA:2.30.110.10 1 159 6.4E-47 T 15-10-2018 IPR012349 FMN-binding split barrel GO:0048037 AM378_06810 3e16c2485945c4090dc4cfe03617259a 309 SMART SM00903 13 156 5.7E-54 T 15-10-2018 IPR002563 Flavin reductase like domain GO:0010181 AM378_06810 3e16c2485945c4090dc4cfe03617259a 309 Gene3D G3DSA:3.90.79.10 160 293 1.7E-32 T 15-10-2018 AM378_06810 3e16c2485945c4090dc4cfe03617259a 309 SUPERFAMILY SSF55811 167 287 9.05E-5 T 15-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 AM378_06810 3e16c2485945c4090dc4cfe03617259a 309 Pfam PF01613 Flavin reductase like domain 14 155 3.1E-31 T 15-10-2018 IPR002563 Flavin reductase like domain GO:0010181 AM378_06810 3e16c2485945c4090dc4cfe03617259a 309 SUPERFAMILY SSF50475 5 158 1.32E-44 T 15-10-2018 AM378_24300 432eda224931375a7e5bc27851b37621 303 SUPERFAMILY SSF51735 1 167 3.07E-62 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily AM378_24300 432eda224931375a7e5bc27851b37621 303 Pfam PF02558 Ketopantoate reductase PanE/ApbA 3 142 3.0E-25 T 15-10-2018 IPR013332 Ketopantoate reductase, N-terminal domain AM378_24300 432eda224931375a7e5bc27851b37621 303 Gene3D G3DSA:1.10.1040.10 168 290 8.1E-46 T 15-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AM378_24300 432eda224931375a7e5bc27851b37621 303 SUPERFAMILY SSF48179 168 289 6.46E-36 T 15-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 AM378_24300 432eda224931375a7e5bc27851b37621 303 Pfam PF08546 Ketopantoate reductase PanE/ApbA C terminal 168 289 5.6E-34 T 15-10-2018 IPR013752 Ketopantoate reductase, C-terminal domain AM378_24300 432eda224931375a7e5bc27851b37621 303 TIGRFAM TIGR00745 apbA_panE: 2-dehydropantoate 2-reductase 2 291 5.7E-80 T 15-10-2018 IPR003710 Ketopantoate reductase ApbA/PanE GO:0005737|GO:0008677|GO:0015940 KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654 AM378_24300 432eda224931375a7e5bc27851b37621 303 Gene3D G3DSA:3.40.50.720 1 167 8.0E-57 T 15-10-2018 AM378_22220 b43795f7a0196b694164c5a87d5036e3 400 Gene3D G3DSA:1.20.1250.20 12 388 3.3E-39 T 15-10-2018 AM378_22220 b43795f7a0196b694164c5a87d5036e3 400 Pfam PF07690 Major Facilitator Superfamily 21 330 6.7E-31 T 15-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM378_22220 b43795f7a0196b694164c5a87d5036e3 400 SUPERFAMILY SSF103473 10 387 4.05E-51 T 15-10-2018 IPR036259 MFS transporter superfamily AM378_05215 5b06b849dd520fef0eb3b85745fcbc9e 407 Gene3D G3DSA:2.30.40.10 15 403 3.3E-159 T 15-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 AM378_05215 5b06b849dd520fef0eb3b85745fcbc9e 407 TIGRFAM TIGR01224 hutI: imidazolonepropionase 29 405 4.5E-155 T 15-10-2018 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 AM378_05215 5b06b849dd520fef0eb3b85745fcbc9e 407 Pfam PF01979 Amidohydrolase family 64 381 4.5E-17 T 15-10-2018 IPR006680 Amidohydrolase-related GO:0016787 AM378_05215 5b06b849dd520fef0eb3b85745fcbc9e 407 Gene3D G3DSA:3.20.20.140 68 366 3.3E-159 T 15-10-2018 AM378_05215 5b06b849dd520fef0eb3b85745fcbc9e 407 SUPERFAMILY SSF51556 67 367 1.36E-83 T 15-10-2018 IPR032466 Metal-dependent hydrolase AM378_05215 5b06b849dd520fef0eb3b85745fcbc9e 407 SUPERFAMILY SSF51338 6 405 1.09E-28 T 15-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 AM378_05215 5b06b849dd520fef0eb3b85745fcbc9e 407 Hamap MF_00372 Imidazolonepropionase [hutI]. 8 406 42.328 T 15-10-2018 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 AM378_04590 2cf72945b8b27ba49cc681d62900b8d1 399 Pfam PF12241 Trans-2-enoyl-CoA reductase catalytic region 82 317 6.1E-116 T 15-10-2018 IPR024910 Trans-2-enoyl-CoA reductase catalytic domain, putative KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 AM378_04590 2cf72945b8b27ba49cc681d62900b8d1 399 Hamap MF_01838 Trans-2-enoyl-CoA reductase [NADH] [fabV]. 1 393 56.301 T 15-10-2018 IPR010758 Trans-2-enoyl-CoA reductase GO:0016491|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 AM378_04590 2cf72945b8b27ba49cc681d62900b8d1 399 Pfam PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase 2 80 1.4E-39 T 15-10-2018 IPR010758 Trans-2-enoyl-CoA reductase GO:0016491|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 AM378_04590 2cf72945b8b27ba49cc681d62900b8d1 399 Pfam PF07055 Enoyl reductase FAD binding domain 324 386 2.0E-29 T 15-10-2018 IPR024906 Enoyl reductase FAD binding domain KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 AM378_04590 2cf72945b8b27ba49cc681d62900b8d1 399 Gene3D G3DSA:3.40.50.720 1 397 1.4E-181 T 15-10-2018 AM378_19730 0f4d7f8affeabbb895ed206769120506 146 Gene3D G3DSA:1.20.120.330 20 138 1.7E-7 T 15-10-2018 AM378_12605 b5151cd1da19efbb1294b45ba7623f2f 441 SMART SM00388 221 284 2.5E-11 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM378_12605 b5151cd1da19efbb1294b45ba7623f2f 441 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 334 437 3.8E-17 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AM378_12605 b5151cd1da19efbb1294b45ba7623f2f 441 PRINTS PR00344 Bacterial sensor protein C-terminal signature 367 381 7.7E-13 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM378_12605 b5151cd1da19efbb1294b45ba7623f2f 441 PRINTS PR00344 Bacterial sensor protein C-terminal signature 424 437 7.7E-13 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM378_12605 b5151cd1da19efbb1294b45ba7623f2f 441 PRINTS PR00344 Bacterial sensor protein C-terminal signature 385 395 7.7E-13 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM378_12605 b5151cd1da19efbb1294b45ba7623f2f 441 PRINTS PR00344 Bacterial sensor protein C-terminal signature 400 418 7.7E-13 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM378_12605 b5151cd1da19efbb1294b45ba7623f2f 441 SMART SM00304 165 220 2.4E-10 T 15-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AM378_12605 b5151cd1da19efbb1294b45ba7623f2f 441 SMART SM00387 330 440 2.4E-28 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AM378_12605 b5151cd1da19efbb1294b45ba7623f2f 441 SUPERFAMILY SSF47384 205 284 6.47E-14 T 15-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AM378_12605 b5151cd1da19efbb1294b45ba7623f2f 441 SUPERFAMILY SSF55874 274 438 5.11E-35 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AM378_12605 b5151cd1da19efbb1294b45ba7623f2f 441 Pfam PF00512 His Kinase A (phospho-acceptor) domain 222 283 2.8E-10 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM378_12605 b5151cd1da19efbb1294b45ba7623f2f 441 Pfam PF00672 HAMP domain 166 216 7.7E-10 T 15-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AM378_12605 b5151cd1da19efbb1294b45ba7623f2f 441 SUPERFAMILY SSF158472 166 216 3.79E-8 T 15-10-2018 AM378_12605 b5151cd1da19efbb1294b45ba7623f2f 441 Gene3D G3DSA:3.30.565.10 288 439 1.3E-35 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AM378_12605 b5151cd1da19efbb1294b45ba7623f2f 441 Gene3D G3DSA:1.10.287.130 169 285 1.1E-28 T 15-10-2018 AM378_07195 4a02a8d67971d3ad8615bcd953bedb95 478 PRINTS PR00131 Glycosyl hydrolase family 1 signature 440 452 1.5E-16 T 15-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 AM378_07195 4a02a8d67971d3ad8615bcd953bedb95 478 PRINTS PR00131 Glycosyl hydrolase family 1 signature 393 404 1.5E-16 T 15-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 AM378_07195 4a02a8d67971d3ad8615bcd953bedb95 478 PRINTS PR00131 Glycosyl hydrolase family 1 signature 306 320 1.5E-16 T 15-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 AM378_07195 4a02a8d67971d3ad8615bcd953bedb95 478 PRINTS PR00131 Glycosyl hydrolase family 1 signature 415 432 1.5E-16 T 15-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 AM378_07195 4a02a8d67971d3ad8615bcd953bedb95 478 PRINTS PR00131 Glycosyl hydrolase family 1 signature 372 380 1.5E-16 T 15-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 AM378_07195 4a02a8d67971d3ad8615bcd953bedb95 478 Gene3D G3DSA:3.20.20.80 1 478 5.2E-166 T 15-10-2018 AM378_07195 4a02a8d67971d3ad8615bcd953bedb95 478 ProSitePatterns PS00653 Glycosyl hydrolases family 1 N-terminal signature. 10 24 - T 15-10-2018 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site AM378_07195 4a02a8d67971d3ad8615bcd953bedb95 478 SUPERFAMILY SSF51445 2 471 1.06E-162 T 15-10-2018 IPR017853 Glycoside hydrolase superfamily AM378_07195 4a02a8d67971d3ad8615bcd953bedb95 478 ProSitePatterns PS00572 Glycosyl hydrolases family 1 active site. 372 380 - T 15-10-2018 IPR018120 Glycoside hydrolase family 1, active site AM378_07195 4a02a8d67971d3ad8615bcd953bedb95 478 Pfam PF00232 Glycosyl hydrolase family 1 4 475 6.0E-133 T 15-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 AM378_18635 ee26ac16cf3d498121264b6d407ffc3c 243 ProSitePatterns PS00195 Glutaredoxin active site. 175 191 - T 15-10-2018 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 Reactome: R-HSA-499943 AM378_18635 ee26ac16cf3d498121264b6d407ffc3c 243 Gene3D G3DSA:3.40.30.10 4 165 2.7E-62 T 15-10-2018 AM378_18635 ee26ac16cf3d498121264b6d407ffc3c 243 PRINTS PR00160 Glutaredoxin signature 214 227 1.2E-14 T 15-10-2018 IPR014025 Glutaredoxin subgroup AM378_18635 ee26ac16cf3d498121264b6d407ffc3c 243 PRINTS PR00160 Glutaredoxin signature 228 241 1.2E-14 T 15-10-2018 IPR014025 Glutaredoxin subgroup AM378_18635 ee26ac16cf3d498121264b6d407ffc3c 243 PRINTS PR00160 Glutaredoxin signature 173 191 1.2E-14 T 15-10-2018 IPR014025 Glutaredoxin subgroup AM378_18635 ee26ac16cf3d498121264b6d407ffc3c 243 Pfam PF00462 Glutaredoxin 173 231 1.6E-19 T 15-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 AM378_18635 ee26ac16cf3d498121264b6d407ffc3c 243 SUPERFAMILY SSF52833 2 241 9.99E-47 T 15-10-2018 IPR036249 Thioredoxin-like superfamily AM378_18635 ee26ac16cf3d498121264b6d407ffc3c 243 Pfam PF08534 Redoxin 5 160 2.3E-33 T 15-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 AM378_18635 ee26ac16cf3d498121264b6d407ffc3c 243 TIGRFAM TIGR02190 GlrX-dom: glutaredoxin-family domain 164 242 1.5E-39 T 15-10-2018 IPR011906 Glutaredoxin domain KEGG: 00480+1.11.1.15 AM378_18635 ee26ac16cf3d498121264b6d407ffc3c 243 Gene3D G3DSA:3.40.30.10 171 241 3.0E-24 T 15-10-2018 AM378_04185 841002c7ee79879e3222b518901756f3 266 Gene3D G3DSA:2.60.120.10 18 101 5.1E-8 T 15-10-2018 IPR014710 RmlC-like jelly roll fold AM378_04185 841002c7ee79879e3222b518901756f3 266 SUPERFAMILY SSF46689 206 251 3.58E-9 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AM378_04185 841002c7ee79879e3222b518901756f3 266 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 206 247 - T 15-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AM378_04185 841002c7ee79879e3222b518901756f3 266 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 220 235 5.5E-6 T 15-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM378_04185 841002c7ee79879e3222b518901756f3 266 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 235 251 5.5E-6 T 15-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM378_04185 841002c7ee79879e3222b518901756f3 266 Pfam PF12833 Helix-turn-helix domain 176 251 4.1E-24 T 15-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM378_04185 841002c7ee79879e3222b518901756f3 266 SUPERFAMILY SSF51182 23 176 6.67E-18 T 15-10-2018 IPR011051 RmlC-like cupin domain superfamily AM378_04185 841002c7ee79879e3222b518901756f3 266 Pfam PF07883 Cupin domain 22 85 4.5E-7 T 15-10-2018 IPR013096 Cupin 2, conserved barrel AM378_04185 841002c7ee79879e3222b518901756f3 266 Gene3D G3DSA:1.10.10.60 154 255 4.4E-26 T 15-10-2018 AM378_04185 841002c7ee79879e3222b518901756f3 266 SMART SM00342 169 251 6.3E-29 T 15-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM378_14265 5e2a15e42e11b99215e9e73486cc38ff 165 SUPERFAMILY SSF54637 17 163 9.31E-51 T 15-10-2018 IPR029069 HotDog domain superfamily AM378_14265 5e2a15e42e11b99215e9e73486cc38ff 165 Gene3D G3DSA:3.10.129.10 19 162 5.0E-66 T 15-10-2018 AM378_14265 5e2a15e42e11b99215e9e73486cc38ff 165 TIGRFAM TIGR01750 fabZ: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 22 160 4.7E-61 T 15-10-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 AM378_14265 5e2a15e42e11b99215e9e73486cc38ff 165 Pfam PF07977 FabA-like domain 31 155 8.1E-41 T 15-10-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 AM378_14265 5e2a15e42e11b99215e9e73486cc38ff 165 Hamap MF_00406 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ [fabZ]. 22 163 37.83 T 15-10-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 AM378_14515 0c1d30881f071f7d38bd4cba347b7e65 175 Hamap MF_00298 RNA pyrophosphohydrolase [rppH]. 1 156 37.584 T 15-10-2018 IPR022927 RNA pyrophosphohydrolase RppH AM378_14515 0c1d30881f071f7d38bd4cba347b7e65 175 Gene3D G3DSA:3.90.79.10 1 159 1.8E-52 T 15-10-2018 AM378_14515 0c1d30881f071f7d38bd4cba347b7e65 175 PRINTS PR00502 NUDIX hydrolase family signature 47 62 1.1E-7 T 15-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 AM378_14515 0c1d30881f071f7d38bd4cba347b7e65 175 PRINTS PR00502 NUDIX hydrolase family signature 33 47 1.1E-7 T 15-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 AM378_14515 0c1d30881f071f7d38bd4cba347b7e65 175 SUPERFAMILY SSF55811 6 153 1.35E-32 T 15-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 AM378_14515 0c1d30881f071f7d38bd4cba347b7e65 175 Pfam PF00293 NUDIX domain 7 146 2.1E-28 T 15-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 AM378_14515 0c1d30881f071f7d38bd4cba347b7e65 175 ProSitePatterns PS00893 Nudix box signature. 38 59 - T 15-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 AM378_17500 9dd0a6fcccb008f4c1fd345e2136a221 136 ProSitePatterns PS00701 Ribosomal protein L16 signature 2. 81 92 - T 15-10-2018 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM378_17500 9dd0a6fcccb008f4c1fd345e2136a221 136 TIGRFAM TIGR01164 rplP_bact: ribosomal protein uL16 2 126 2.0E-59 T 15-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM378_17500 9dd0a6fcccb008f4c1fd345e2136a221 136 PRINTS PR00060 Ribosomal protein L16 signature 57 86 2.2E-40 T 15-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM378_17500 9dd0a6fcccb008f4c1fd345e2136a221 136 PRINTS PR00060 Ribosomal protein L16 signature 87 116 2.2E-40 T 15-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM378_17500 9dd0a6fcccb008f4c1fd345e2136a221 136 PRINTS PR00060 Ribosomal protein L16 signature 41 52 2.2E-40 T 15-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM378_17500 9dd0a6fcccb008f4c1fd345e2136a221 136 PRINTS PR00060 Ribosomal protein L16 signature 23 35 2.2E-40 T 15-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM378_17500 9dd0a6fcccb008f4c1fd345e2136a221 136 ProSitePatterns PS00586 Ribosomal protein L16 signature 1. 58 69 - T 15-10-2018 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM378_17500 9dd0a6fcccb008f4c1fd345e2136a221 136 SUPERFAMILY SSF54686 3 133 2.75E-55 T 15-10-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 AM378_17500 9dd0a6fcccb008f4c1fd345e2136a221 136 Pfam PF00252 Ribosomal protein L16p/L10e 4 131 2.3E-47 T 15-10-2018 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 AM378_17500 9dd0a6fcccb008f4c1fd345e2136a221 136 Gene3D G3DSA:3.90.1170.10 1 136 7.0E-56 T 15-10-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 AM378_17500 9dd0a6fcccb008f4c1fd345e2136a221 136 Hamap MF_01342 50S ribosomal protein L16 [rplP]. 1 133 38.265 T 15-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM378_10900 d8a5e9893fafb7f5a6feabac9f76d023 354 Pfam PF01497 Periplasmic binding protein 46 292 1.6E-17 T 15-10-2018 IPR002491 ABC transporter periplasmic binding domain AM378_10900 d8a5e9893fafb7f5a6feabac9f76d023 354 Gene3D G3DSA:3.40.50.1980 36 354 6.6E-54 T 15-10-2018 AM378_10900 d8a5e9893fafb7f5a6feabac9f76d023 354 SUPERFAMILY SSF53807 38 349 2.75E-31 T 15-10-2018 AM378_12145 569c1da30fc8ecfd757fab17a70338c6 160 TIGRFAM TIGR00249 sixA: phosphohistidine phosphatase SixA 1 153 2.6E-48 T 15-10-2018 IPR004449 Phosphohistidine phosphatase SixA GO:0005737|GO:0006464|GO:0101006 AM378_12145 569c1da30fc8ecfd757fab17a70338c6 160 Gene3D G3DSA:3.40.50.1240 1 159 4.1E-38 T 15-10-2018 IPR029033 Histidine phosphatase superfamily AM378_12145 569c1da30fc8ecfd757fab17a70338c6 160 SUPERFAMILY SSF53254 1 142 3.73E-17 T 15-10-2018 IPR029033 Histidine phosphatase superfamily AM378_12145 569c1da30fc8ecfd757fab17a70338c6 160 SMART SM00855 2 115 0.0015 T 15-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 AM378_12145 569c1da30fc8ecfd757fab17a70338c6 160 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 3 70 2.6E-7 T 15-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 AM378_08260 0afc771632123d32b5278c2416d05f97 338 Pfam PF00005 ABC transporter 41 197 6.6E-28 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM378_08260 0afc771632123d32b5278c2416d05f97 338 SUPERFAMILY SSF52540 50 318 5.55E-69 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_08260 0afc771632123d32b5278c2416d05f97 338 SMART SM00382 49 255 1.8E-12 T 15-10-2018 IPR003593 AAA+ ATPase domain AM378_08260 0afc771632123d32b5278c2416d05f97 338 Gene3D G3DSA:3.40.50.300 18 336 6.2E-98 T 15-10-2018 AM378_08260 0afc771632123d32b5278c2416d05f97 338 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 249 313 7.9E-22 T 15-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AM378_08260 0afc771632123d32b5278c2416d05f97 338 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 249 331 5.3E-25 T 15-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AM378_08260 0afc771632123d32b5278c2416d05f97 338 ProSitePatterns PS00211 ABC transporters family signature. 170 184 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM378_02060 c65a206d17191c55ebd75db0837d7fa3 164 Pfam PF11086 Protein of unknown function (DUF2878) 9 152 2.9E-23 T 15-10-2018 IPR021306 Protein of unknown function DUF2878 AM378_16985 915f290c09fd664304b2ba06073ab163 135 Gene3D G3DSA:3.10.180.10 1 135 7.3E-58 T 15-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AM378_16985 915f290c09fd664304b2ba06073ab163 135 SUPERFAMILY SSF54593 3 128 1.1E-23 T 15-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AM378_11825 9aefb6e2a8887d2a5b80046d5cef7b3b 218 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 6 164 1.6E-5 T 15-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AM378_11825 9aefb6e2a8887d2a5b80046d5cef7b3b 218 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 49 181 3.0E-17 T 15-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AM378_11825 9aefb6e2a8887d2a5b80046d5cef7b3b 218 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 125 141 6.0E-10 T 15-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AM378_11825 9aefb6e2a8887d2a5b80046d5cef7b3b 218 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 143 163 6.0E-10 T 15-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AM378_11825 9aefb6e2a8887d2a5b80046d5cef7b3b 218 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 3 14 6.0E-10 T 15-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AM378_11825 9aefb6e2a8887d2a5b80046d5cef7b3b 218 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 95 108 6.0E-10 T 15-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AM378_11825 9aefb6e2a8887d2a5b80046d5cef7b3b 218 Pfam PF13419 Haloacid dehalogenase-like hydrolase 7 181 1.7E-26 T 15-10-2018 AM378_11825 9aefb6e2a8887d2a5b80046d5cef7b3b 218 SUPERFAMILY SSF56784 4 203 3.74E-48 T 15-10-2018 IPR036412 HAD-like superfamily AM378_11825 9aefb6e2a8887d2a5b80046d5cef7b3b 218 Gene3D G3DSA:3.40.50.1000 4 196 1.8E-56 T 15-10-2018 IPR023214 HAD superfamily AM378_11825 9aefb6e2a8887d2a5b80046d5cef7b3b 218 Gene3D G3DSA:1.10.150.240 18 80 1.8E-56 T 15-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 AM378_12745 5604810a8ed5690a8d9b18cda6f85ca3 316 ProSitePatterns PS00958 Transaldolase active site. 128 145 - T 15-10-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 AM378_12745 5604810a8ed5690a8d9b18cda6f85ca3 316 Hamap MF_00492 Transaldolase [tal]. 1 316 52.1 T 15-10-2018 IPR004730 Transaldolase type 1 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 AM378_12745 5604810a8ed5690a8d9b18cda6f85ca3 316 Pfam PF00923 Transaldolase/Fructose-6-phosphate aldolase 13 311 2.1E-100 T 15-10-2018 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 AM378_12745 5604810a8ed5690a8d9b18cda6f85ca3 316 ProSitePatterns PS01054 Transaldolase signature 1. 30 38 - T 15-10-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 AM378_12745 5604810a8ed5690a8d9b18cda6f85ca3 316 Gene3D G3DSA:3.20.20.70 1 316 6.7E-138 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM378_12745 5604810a8ed5690a8d9b18cda6f85ca3 316 TIGRFAM TIGR00874 talAB: transaldolase 2 315 5.5E-157 T 15-10-2018 IPR004730 Transaldolase type 1 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 AM378_12745 5604810a8ed5690a8d9b18cda6f85ca3 316 SUPERFAMILY SSF51569 1 314 6.28E-114 T 15-10-2018 AM378_18630 22c1cc3d7c5defe5c16e84f4fb8a1272 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.4E-8 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_18630 22c1cc3d7c5defe5c16e84f4fb8a1272 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.4E-8 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_18630 22c1cc3d7c5defe5c16e84f4fb8a1272 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.4E-8 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_18630 22c1cc3d7c5defe5c16e84f4fb8a1272 305 Gene3D G3DSA:1.10.10.10 1 85 5.1E-29 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_18630 22c1cc3d7c5defe5c16e84f4fb8a1272 305 SUPERFAMILY SSF46785 1 85 1.18E-22 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM378_18630 22c1cc3d7c5defe5c16e84f4fb8a1272 305 SUPERFAMILY SSF53850 89 296 1.17E-46 T 15-10-2018 AM378_18630 22c1cc3d7c5defe5c16e84f4fb8a1272 305 Pfam PF03466 LysR substrate binding domain 88 293 6.6E-53 T 15-10-2018 IPR005119 LysR, substrate-binding AM378_18630 22c1cc3d7c5defe5c16e84f4fb8a1272 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 8.5E-21 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_18630 22c1cc3d7c5defe5c16e84f4fb8a1272 305 Gene3D G3DSA:3.40.190.10 91 281 1.0E-76 T 15-10-2018 AM378_18630 22c1cc3d7c5defe5c16e84f4fb8a1272 305 Gene3D G3DSA:3.40.190.10 164 267 1.0E-76 T 15-10-2018 AM378_19665 0237ef584e8181acb0e3dde75e1e3b80 201 Pfam PF00043 Glutathione S-transferase, C-terminal domain 115 193 9.3E-8 T 15-10-2018 IPR004046 Glutathione S-transferase, C-terminal AM378_19665 0237ef584e8181acb0e3dde75e1e3b80 201 Gene3D G3DSA:3.40.30.10 3 196 2.2E-65 T 15-10-2018 AM378_19665 0237ef584e8181acb0e3dde75e1e3b80 201 Pfam PF13417 Glutathione S-transferase, N-terminal domain 3 73 2.4E-17 T 15-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AM378_19665 0237ef584e8181acb0e3dde75e1e3b80 201 SUPERFAMILY SSF52833 1 100 5.04E-19 T 15-10-2018 IPR036249 Thioredoxin-like superfamily AM378_19665 0237ef584e8181acb0e3dde75e1e3b80 201 Gene3D G3DSA:1.20.1050.10 79 192 2.2E-65 T 15-10-2018 AM378_19665 0237ef584e8181acb0e3dde75e1e3b80 201 SUPERFAMILY SSF47616 77 200 1.53E-19 T 15-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily AM378_22070 ab9ee4a4dc335098c249e67a8e0367ad 215 SMART SM00421 153 210 3.6E-19 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM378_22070 ab9ee4a4dc335098c249e67a8e0367ad 215 Pfam PF00196 Bacterial regulatory proteins, luxR family 155 207 3.2E-14 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM378_22070 ab9ee4a4dc335098c249e67a8e0367ad 215 Gene3D G3DSA:1.10.10.10 151 209 2.3E-20 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_22070 ab9ee4a4dc335098c249e67a8e0367ad 215 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 186 198 3.3E-12 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM378_22070 ab9ee4a4dc335098c249e67a8e0367ad 215 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 156 170 3.3E-12 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM378_22070 ab9ee4a4dc335098c249e67a8e0367ad 215 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 170 186 3.3E-12 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM378_22070 ab9ee4a4dc335098c249e67a8e0367ad 215 ProSitePatterns PS00622 LuxR-type HTH domain signature. 170 197 - T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM378_22070 ab9ee4a4dc335098c249e67a8e0367ad 215 SUPERFAMILY SSF46894 148 208 3.74E-18 T 15-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AM378_12495 0bc0cc402f46ab160c09b5135a6d94cd 345 Pfam PF01032 FecCD transport family 35 341 5.8E-82 T 15-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 AM378_12495 0bc0cc402f46ab160c09b5135a6d94cd 345 SUPERFAMILY SSF81345 16 341 1.7E-72 T 15-10-2018 IPR037294 ABC transporter, BtuC-like AM378_12495 0bc0cc402f46ab160c09b5135a6d94cd 345 Gene3D G3DSA:1.10.3470.10 22 345 3.8E-88 T 15-10-2018 IPR037294 ABC transporter, BtuC-like AM378_01965 b389ce70bee4968565a5e7da88b1edfd 140 SUPERFAMILY SSF55811 9 136 3.66E-24 T 15-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 AM378_01965 b389ce70bee4968565a5e7da88b1edfd 140 Pfam PF00293 NUDIX domain 13 118 2.6E-15 T 15-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 AM378_01965 b389ce70bee4968565a5e7da88b1edfd 140 Gene3D G3DSA:3.90.79.10 5 127 2.8E-19 T 15-10-2018 AM378_01965 b389ce70bee4968565a5e7da88b1edfd 140 ProSitePatterns PS00893 Nudix box signature. 41 62 - T 15-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 AM378_13595 90b6b3008f4849a15d89ba176ba864a4 226 SMART SM00358 156 224 2.0E-23 T 15-10-2018 IPR014720 Double-stranded RNA-binding domain AM378_13595 90b6b3008f4849a15d89ba176ba864a4 226 Hamap MF_00104 Ribonuclease 3 [rnc]. 9 220 29.49 T 15-10-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 AM378_13595 90b6b3008f4849a15d89ba176ba864a4 226 Gene3D G3DSA:3.30.160.20 154 224 4.1E-20 T 15-10-2018 AM378_13595 90b6b3008f4849a15d89ba176ba864a4 226 SUPERFAMILY SSF54768 109 223 6.76E-27 T 15-10-2018 AM378_13595 90b6b3008f4849a15d89ba176ba864a4 226 Pfam PF00035 Double-stranded RNA binding motif 156 223 3.0E-14 T 15-10-2018 IPR014720 Double-stranded RNA-binding domain AM378_13595 90b6b3008f4849a15d89ba176ba864a4 226 Gene3D G3DSA:1.10.1520.10 4 148 4.6E-44 T 15-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 AM378_13595 90b6b3008f4849a15d89ba176ba864a4 226 TIGRFAM TIGR02191 RNaseIII: ribonuclease III 9 223 1.0E-73 T 15-10-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 AM378_13595 90b6b3008f4849a15d89ba176ba864a4 226 SMART SM00535 21 149 5.4E-58 T 15-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 AM378_13595 90b6b3008f4849a15d89ba176ba864a4 226 SUPERFAMILY SSF69065 5 159 1.71E-49 T 15-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 AM378_13595 90b6b3008f4849a15d89ba176ba864a4 226 Pfam PF14622 Ribonuclease-III-like 20 140 1.8E-33 T 15-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 AM378_13595 90b6b3008f4849a15d89ba176ba864a4 226 ProSitePatterns PS00517 Ribonuclease III family signature. 38 46 - T 15-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 AM378_09775 c1ea444c55ad08484b5df9345dcf2363 214 Pfam PF04344 Chemotaxis phosphatase, CheZ 16 214 1.2E-76 T 15-10-2018 IPR007439 Chemotaxis phosphatase, CheZ GO:0003824|GO:0009288|GO:0050920 AM378_09775 c1ea444c55ad08484b5df9345dcf2363 214 Gene3D G3DSA:1.20.5.590 6 34 9.2E-10 T 15-10-2018 AM378_09775 c1ea444c55ad08484b5df9345dcf2363 214 SUPERFAMILY SSF75708 14 213 1.96E-66 T 15-10-2018 AM378_09775 c1ea444c55ad08484b5df9345dcf2363 214 Gene3D G3DSA:1.10.287.500 35 168 7.4E-52 T 15-10-2018 AM378_09775 c1ea444c55ad08484b5df9345dcf2363 214 PIRSF PIRSF002884 5 214 7.1E-85 T 15-10-2018 IPR007439 Chemotaxis phosphatase, CheZ GO:0003824|GO:0009288|GO:0050920 AM378_00280 fad4659046718e4300e9e59a2fc2924c 214 TIGRFAM TIGR01351 adk: adenylate kinase 2 213 4.4E-76 T 15-10-2018 IPR006259 Adenylate kinase subfamily GO:0004017|GO:0005524|GO:0016776 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 AM378_00280 fad4659046718e4300e9e59a2fc2924c 214 Hamap MF_00235 Adenylate kinase [adk]. 1 214 53.204 T 15-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 AM378_00280 fad4659046718e4300e9e59a2fc2924c 214 SUPERFAMILY SSF52540 1 188 7.38E-45 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_00280 fad4659046718e4300e9e59a2fc2924c 214 ProSitePatterns PS00113 Adenylate kinase signature. 81 92 - T 15-10-2018 IPR033690 Adenylate kinase, conserved site KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 AM378_00280 fad4659046718e4300e9e59a2fc2924c 214 Pfam PF05191 Adenylate kinase, active site lid 123 158 3.7E-16 T 15-10-2018 IPR007862 Adenylate kinase, active site lid domain GO:0004017 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 AM378_00280 fad4659046718e4300e9e59a2fc2924c 214 PRINTS PR00094 Adenylate kinase signature 81 97 7.4E-36 T 15-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 AM378_00280 fad4659046718e4300e9e59a2fc2924c 214 PRINTS PR00094 Adenylate kinase signature 4 17 7.4E-36 T 15-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 AM378_00280 fad4659046718e4300e9e59a2fc2924c 214 PRINTS PR00094 Adenylate kinase signature 173 187 7.4E-36 T 15-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 AM378_00280 fad4659046718e4300e9e59a2fc2924c 214 PRINTS PR00094 Adenylate kinase signature 32 46 7.4E-36 T 15-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 AM378_00280 fad4659046718e4300e9e59a2fc2924c 214 PRINTS PR00094 Adenylate kinase signature 156 171 7.4E-36 T 15-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 AM378_00280 fad4659046718e4300e9e59a2fc2924c 214 Gene3D G3DSA:3.40.50.300 1 214 5.0E-82 T 15-10-2018 AM378_00280 fad4659046718e4300e9e59a2fc2924c 214 Pfam PF00406 Adenylate kinase 5 186 5.2E-61 T 15-10-2018 AM378_00225 26c6d5f1b23dc7dbf5905c809188261a 224 Pfam PF08361 MAATS-type transcriptional repressor, C-terminal region 84 204 3.8E-54 T 15-10-2018 IPR013572 Transcription regulator MAATS, C-terminal GO:0003677 AM378_00225 26c6d5f1b23dc7dbf5905c809188261a 224 ProSitePatterns PS01081 TetR-type HTH domain signature. 28 58 - T 15-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site AM378_00225 26c6d5f1b23dc7dbf5905c809188261a 224 SUPERFAMILY SSF46689 2 75 1.8E-20 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AM378_00225 26c6d5f1b23dc7dbf5905c809188261a 224 Gene3D G3DSA:1.10.357.10 1 217 2.4E-83 T 15-10-2018 AM378_00225 26c6d5f1b23dc7dbf5905c809188261a 224 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 62 1.0E-19 T 15-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM378_00225 26c6d5f1b23dc7dbf5905c809188261a 224 SUPERFAMILY SSF48498 85 202 6.47E-15 T 15-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AM378_00225 26c6d5f1b23dc7dbf5905c809188261a 224 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 37 60 1.3E-11 T 15-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM378_00225 26c6d5f1b23dc7dbf5905c809188261a 224 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 16 29 1.3E-11 T 15-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM378_06055 bbeae241c3eff69aa554e52757cd7549 332 ProSitePatterns PS00485 Adenosine and AMP deaminase signature. 274 280 - T 15-10-2018 IPR006650 Adenosine/AMP deaminase active site GO:0009168|GO:0019239 Reactome: R-HSA-74217 AM378_06055 bbeae241c3eff69aa554e52757cd7549 332 Pfam PF00962 Adenosine/AMP deaminase 6 327 4.0E-93 T 15-10-2018 IPR001365 Adenosine/AMP deaminase domain GO:0019239 Reactome: R-HSA-74217 AM378_06055 bbeae241c3eff69aa554e52757cd7549 332 Hamap MF_00540 Adenosine deaminase [add]. 1 331 53.246 T 15-10-2018 IPR028893 Adenosine deaminase GO:0004000|GO:0009168 KEGG: 00230+3.5.4.4|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-74217 AM378_06055 bbeae241c3eff69aa554e52757cd7549 332 SUPERFAMILY SSF51556 5 327 5.18E-78 T 15-10-2018 IPR032466 Metal-dependent hydrolase AM378_06055 bbeae241c3eff69aa554e52757cd7549 332 TIGRFAM TIGR01430 aden_deam: adenosine deaminase 6 330 1.1E-108 T 15-10-2018 IPR006330 Adenosine/adenine deaminase GO:0019239 Reactome: R-HSA-74217 AM378_06055 bbeae241c3eff69aa554e52757cd7549 332 Gene3D G3DSA:3.20.20.140 4 332 6.0E-98 T 15-10-2018 AM378_21460 c6b1751e22e99f287759d30609a65f8a 720 Pfam PF01276 Orn/Lys/Arg decarboxylase, major domain 109 550 1.6E-198 T 15-10-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 AM378_21460 c6b1751e22e99f287759d30609a65f8a 720 SUPERFAMILY SSF55904 573 719 3.14E-47 T 15-10-2018 IPR036633 Orn/Lys/Arg decarboxylase, C-terminal domain superfamily GO:0003824 AM378_21460 c6b1751e22e99f287759d30609a65f8a 720 Gene3D G3DSA:3.40.640.10 109 420 1.4E-85 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AM378_21460 c6b1751e22e99f287759d30609a65f8a 720 PIRSF PIRSF009393 1 720 4.1E-296 T 15-10-2018 IPR011193 Ornithine/lysine/arginine decarboxylase GO:0005737|GO:0006520|GO:0016831 AM378_21460 c6b1751e22e99f287759d30609a65f8a 720 SUPERFAMILY SSF52172 1 108 2.09E-33 T 15-10-2018 IPR011006 CheY-like superfamily AM378_21460 c6b1751e22e99f287759d30609a65f8a 720 TIGRFAM TIGR04301 ODC_inducible: ornithine decarboxylase SpeF 1 719 0.0 T 15-10-2018 IPR027568 Ornithine decarboxylase SpeF GO:0004586 KEGG: 00330+4.1.1.17|KEGG: 00480+4.1.1.17|MetaCyc: PWY-46|MetaCyc: PWY-6305 AM378_21460 c6b1751e22e99f287759d30609a65f8a 720 Gene3D G3DSA:3.90.100.10 601 720 1.4E-43 T 15-10-2018 AM378_21460 c6b1751e22e99f287759d30609a65f8a 720 SUPERFAMILY SSF53383 109 568 1.66E-123 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM378_21460 c6b1751e22e99f287759d30609a65f8a 720 Pfam PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain 576 705 1.4E-48 T 15-10-2018 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 AM378_21460 c6b1751e22e99f287759d30609a65f8a 720 ProSitePatterns PS00703 Orn/Lys/Arg decarboxylases family 1 pyridoxal-P attachment site. 350 364 - T 15-10-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 AM378_21460 c6b1751e22e99f287759d30609a65f8a 720 Gene3D G3DSA:3.90.1150.10 421 600 8.5E-71 T 15-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AM378_21460 c6b1751e22e99f287759d30609a65f8a 720 Pfam PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain 4 103 1.6E-22 T 15-10-2018 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal GO:0016831 AM378_21460 c6b1751e22e99f287759d30609a65f8a 720 Gene3D G3DSA:3.40.50.220 1 108 2.0E-21 T 15-10-2018 IPR027464 Ornithine decarboxylase, N-terminal KEGG: 00330+4.1.1.17|KEGG: 00480+4.1.1.17|MetaCyc: PWY-46|MetaCyc: PWY-6305 AM378_11135 d101a651bc038fb32ad1ceb9be5d6a19 257 Gene3D G3DSA:1.25.40.20 37 232 7.3E-15 T 15-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily AM378_11135 d101a651bc038fb32ad1ceb9be5d6a19 257 SUPERFAMILY SSF48403 69 214 2.95E-14 T 15-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily AM378_14550 80a7711ee538ceca633c8b81ab0eabeb 752 Pfam PF01568 Molydopterin dinucleotide binding domain 625 745 5.2E-27 T 15-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 AM378_14550 80a7711ee538ceca633c8b81ab0eabeb 752 SUPERFAMILY SSF53706 11 609 8.64E-154 T 15-10-2018 AM378_14550 80a7711ee538ceca633c8b81ab0eabeb 752 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 453 470 - T 15-10-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 AM378_14550 80a7711ee538ceca633c8b81ab0eabeb 752 Gene3D G3DSA:3.40.50.740 52 517 1.1E-188 T 15-10-2018 AM378_14550 80a7711ee538ceca633c8b81ab0eabeb 752 Gene3D G3DSA:3.90.55.10 10 558 1.1E-188 T 15-10-2018 AM378_14550 80a7711ee538ceca633c8b81ab0eabeb 752 Gene3D G3DSA:3.40.228.10 145 591 1.1E-188 T 15-10-2018 AM378_14550 80a7711ee538ceca633c8b81ab0eabeb 752 Gene3D G3DSA:2.40.40.20 599 752 6.4E-42 T 15-10-2018 AM378_14550 80a7711ee538ceca633c8b81ab0eabeb 752 SUPERFAMILY SSF50692 618 750 2.9E-34 T 15-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily AM378_14550 80a7711ee538ceca633c8b81ab0eabeb 752 Pfam PF00384 Molybdopterin oxidoreductase 52 509 9.6E-60 T 15-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM378_10125 82f4b50431e7a25fbbfe15d1ea6a3bb9 67 SUPERFAMILY SSF143081 9 62 8.11E-6 T 15-10-2018 IPR036590 SOS response associated peptidase-like AM378_10125 82f4b50431e7a25fbbfe15d1ea6a3bb9 67 Gene3D G3DSA:3.90.1680.10 6 67 1.2E-7 T 15-10-2018 IPR036590 SOS response associated peptidase-like AM378_21010 2d7240844d0372fd49f9c9cd92306003 379 TIGRFAM TIGR00276 TIGR00276: epoxyqueuosine reductase 14 348 9.3E-154 T 15-10-2018 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700 AM378_21010 2d7240844d0372fd49f9c9cd92306003 379 SUPERFAMILY SSF46548 139 256 7.85E-20 T 15-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 AM378_21010 2d7240844d0372fd49f9c9cd92306003 379 Pfam PF13484 4Fe-4S double cluster binding domain 192 256 7.5E-19 T 15-10-2018 AM378_21010 2d7240844d0372fd49f9c9cd92306003 379 Hamap MF_00916 Epoxyqueuosine reductase [queG]. 7 315 51.898 T 15-10-2018 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700 AM378_21010 2d7240844d0372fd49f9c9cd92306003 379 Pfam PF08331 Domain of unknown function (DUF1730) 62 140 1.7E-23 T 15-10-2018 IPR013542 Domain of unknown function DUF1730 MetaCyc: PWY-6700 AM378_21010 2d7240844d0372fd49f9c9cd92306003 379 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 193 204 - T 15-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AM378_07840 cf93cb9ac1eac8de764e67611cf193c1 175 ProSitePatterns PS00934 Glyoxalase I signature 1. 27 48 - T 15-10-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 AM378_07840 cf93cb9ac1eac8de764e67611cf193c1 175 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 25 167 4.1E-20 T 15-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AM378_07840 cf93cb9ac1eac8de764e67611cf193c1 175 Gene3D G3DSA:3.10.180.10 8 171 1.9E-59 T 15-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AM378_07840 cf93cb9ac1eac8de764e67611cf193c1 175 TIGRFAM TIGR00068 glyox_I: lactoylglutathione lyase 14 172 2.2E-39 T 15-10-2018 IPR004361 Glyoxalase I GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 AM378_07840 cf93cb9ac1eac8de764e67611cf193c1 175 SUPERFAMILY SSF54593 23 172 1.61E-37 T 15-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AM378_21695 8c447519c46acd9deb49624169add142 141 Pfam PF13669 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 20 112 9.8E-10 T 15-10-2018 AM378_21695 8c447519c46acd9deb49624169add142 141 SUPERFAMILY SSF54593 16 140 9.76E-26 T 15-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AM378_21695 8c447519c46acd9deb49624169add142 141 Gene3D G3DSA:3.10.180.10 13 140 3.3E-21 T 15-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AM378_00615 598eecfe3e557e0b1184dd8c4b496374 387 Pfam PF01546 Peptidase family M20/M25/M40 66 369 2.4E-30 T 15-10-2018 IPR002933 Peptidase M20 GO:0016787 AM378_00615 598eecfe3e557e0b1184dd8c4b496374 387 Gene3D G3DSA:3.30.70.360 174 288 3.9E-128 T 15-10-2018 AM378_00615 598eecfe3e557e0b1184dd8c4b496374 387 SUPERFAMILY SSF55031 176 288 4.84E-29 T 15-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain AM378_00615 598eecfe3e557e0b1184dd8c4b496374 387 Pfam PF07687 Peptidase dimerisation domain 178 273 3.1E-10 T 15-10-2018 IPR011650 Peptidase M20, dimerisation domain AM378_00615 598eecfe3e557e0b1184dd8c4b496374 387 Gene3D G3DSA:3.40.630.10 9 358 3.9E-128 T 15-10-2018 AM378_00615 598eecfe3e557e0b1184dd8c4b496374 387 PIRSF PIRSF005962 1 376 6.4E-117 T 15-10-2018 IPR017439 Amidohydrolase GO:0016787 AM378_00615 598eecfe3e557e0b1184dd8c4b496374 387 SUPERFAMILY SSF53187 3 374 5.03E-80 T 15-10-2018 AM378_00615 598eecfe3e557e0b1184dd8c4b496374 387 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 10 359 2.6E-113 T 15-10-2018 IPR017439 Amidohydrolase GO:0016787 AM378_10290 93f58b02d5316e96097e4a2fe87fc9ac 306 Hamap MF_01942 Lipid A biosynthesis lauroyltransferase [lpxL]. 4 306 51.986 T 15-10-2018 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 AM378_10290 93f58b02d5316e96097e4a2fe87fc9ac 306 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 6 297 1.9E-99 T 15-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 AM378_10290 93f58b02d5316e96097e4a2fe87fc9ac 306 TIGRFAM TIGR02207 lipid_A_htrB: lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase 6 306 3.1E-141 T 15-10-2018 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 AM378_10290 93f58b02d5316e96097e4a2fe87fc9ac 306 PIRSF PIRSF026649 3 306 3.5E-97 T 15-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 AM378_14965 3605ffe10cd67fdc5cb6bc7feafbd565 441 SUPERFAMILY SSF103473 27 440 5.89E-62 T 15-10-2018 IPR036259 MFS transporter superfamily AM378_14965 3605ffe10cd67fdc5cb6bc7feafbd565 441 Gene3D G3DSA:1.20.1250.20 26 441 2.9E-65 T 15-10-2018 AM378_14965 3605ffe10cd67fdc5cb6bc7feafbd565 441 Pfam PF07690 Major Facilitator Superfamily 40 399 1.9E-29 T 15-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM378_14965 3605ffe10cd67fdc5cb6bc7feafbd565 441 ProSitePatterns PS00217 Sugar transport proteins signature 2. 139 164 - T 15-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AM378_22045 c6f76f06a556dc4a3ec322b6b1741df0 433 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 163 178 1.6E-5 T 15-10-2018 AM378_22045 c6f76f06a556dc4a3ec322b6b1741df0 433 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 31 53 1.6E-5 T 15-10-2018 AM378_22045 c6f76f06a556dc4a3ec322b6b1741df0 433 SUPERFAMILY SSF51905 30 412 3.56E-36 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AM378_22045 c6f76f06a556dc4a3ec322b6b1741df0 433 Gene3D G3DSA:3.50.50.60 31 385 2.4E-48 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AM378_22045 c6f76f06a556dc4a3ec322b6b1741df0 433 Gene3D G3DSA:3.30.9.10 125 346 2.4E-48 T 15-10-2018 AM378_22045 c6f76f06a556dc4a3ec322b6b1741df0 433 Pfam PF01266 FAD dependent oxidoreductase 31 385 2.0E-34 T 15-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 AM378_11755 c64cb60264a021b81533293b177f2d5f 100 Hamap MF_01456 NAD(P)H-quinone oxidoreductase subunit 4L, chloroplastic [ndhE]. 2 100 19.962 T 15-10-2018 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 AM378_11755 c64cb60264a021b81533293b177f2d5f 100 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 8 95 2.6E-21 T 15-10-2018 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like AM378_22525 455626bc2b4164fbdf954020693d49f5 299 Gene3D G3DSA:1.10.10.10 5 95 6.5E-18 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_22525 455626bc2b4164fbdf954020693d49f5 299 Pfam PF03466 LysR substrate binding domain 121 288 6.5E-10 T 15-10-2018 IPR005119 LysR, substrate-binding AM378_22525 455626bc2b4164fbdf954020693d49f5 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 67 1.1E-15 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_22525 455626bc2b4164fbdf954020693d49f5 299 Gene3D G3DSA:3.40.190.290 97 293 4.2E-6 T 15-10-2018 AM378_22525 455626bc2b4164fbdf954020693d49f5 299 SUPERFAMILY SSF46785 3 87 5.44E-19 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM378_22525 455626bc2b4164fbdf954020693d49f5 299 SUPERFAMILY SSF53850 92 290 5.12E-25 T 15-10-2018 AM378_21080 ba4134d3615afc45cf11144bc77efe33 243 SUPERFAMILY SSF75217 69 243 2.03E-49 T 15-10-2018 IPR029028 Alpha/beta knot methyltransferases AM378_21080 ba4134d3615afc45cf11144bc77efe33 243 Pfam PF00588 SpoU rRNA Methylase family 96 236 5.0E-40 T 15-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 AM378_21080 ba4134d3615afc45cf11144bc77efe33 243 Gene3D G3DSA:3.40.1280.10 77 243 1.6E-66 T 15-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AM378_21080 ba4134d3615afc45cf11144bc77efe33 243 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 4 76 2.1E-19 T 15-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 AM378_21080 ba4134d3615afc45cf11144bc77efe33 243 SUPERFAMILY SSF55315 2 75 2.24E-20 T 15-10-2018 IPR029064 50S ribosomal protein L30e-like AM378_21080 ba4134d3615afc45cf11144bc77efe33 243 Gene3D G3DSA:3.30.1330.30 1 75 2.3E-30 T 15-10-2018 IPR029064 50S ribosomal protein L30e-like AM378_21080 ba4134d3615afc45cf11144bc77efe33 243 TIGRFAM TIGR00186 rRNA_methyl_3: RNA methyltransferase, TrmH family, group 3 1 242 8.7E-92 T 15-10-2018 IPR004441 RNA methyltransferase TrmH family GO:0006396|GO:0008173 Reactome: R-HSA-6793080 AM378_21080 ba4134d3615afc45cf11144bc77efe33 243 Hamap MF_01887 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB [rlmB]. 2 243 44.321 T 15-10-2018 IPR024915 23S rRNA (guanosine-2-O-)-methyltransferase RlmB AM378_21080 ba4134d3615afc45cf11144bc77efe33 243 SMART SM00967 4 80 1.9E-21 T 15-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 AM378_01770 259e0ff4837f2d841ef28948ec50fdcd 118 PIRSF PIRSF020555 1 118 1.2E-45 T 15-10-2018 IPR014508 Uncharacterised conserved protein withTPR-like repeats AM378_01770 259e0ff4837f2d841ef28948ec50fdcd 118 Pfam PF16068 Domain of unknown function (DUF4810) 25 109 1.0E-34 T 15-10-2018 IPR014508 Uncharacterised conserved protein withTPR-like repeats AM378_18740 546355c3c5f18238d9318b633fea5b73 79 Pfam PF06005 Cell division protein ZapB 1 78 9.3E-29 T 15-10-2018 IPR009252 Cell division protein ZapB GO:0005737|GO:0043093|GO:0090529 AM378_18740 546355c3c5f18238d9318b633fea5b73 79 Hamap MF_01196 Cell division protein ZapB [zapB]. 1 79 17.883 T 15-10-2018 IPR009252 Cell division protein ZapB GO:0005737|GO:0043093|GO:0090529 AM378_18740 546355c3c5f18238d9318b633fea5b73 79 Gene3D G3DSA:1.20.5.340 1 79 1.6E-33 T 15-10-2018 AM378_00475 863f31310a20fd84d9636e1236b244c3 300 Gene3D G3DSA:3.40.1160.10 1 299 1.4E-104 T 15-10-2018 IPR036393 Acetylglutamate kinase-like superfamily AM378_00475 863f31310a20fd84d9636e1236b244c3 300 TIGRFAM TIGR00746 arcC: carbamate kinase 2 299 2.2E-112 T 15-10-2018 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 AM378_00475 863f31310a20fd84d9636e1236b244c3 300 SUPERFAMILY SSF53633 1 298 2.09E-71 T 15-10-2018 IPR036393 Acetylglutamate kinase-like superfamily AM378_00475 863f31310a20fd84d9636e1236b244c3 300 PIRSF PIRSF000723 1 300 1.1E-103 T 15-10-2018 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 AM378_00475 863f31310a20fd84d9636e1236b244c3 300 Pfam PF00696 Amino acid kinase family 2 280 1.5E-28 T 15-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 AM378_00475 863f31310a20fd84d9636e1236b244c3 300 PRINTS PR01469 Bacterial carbamate kinase signature 72 90 3.9E-54 T 15-10-2018 AM378_00475 863f31310a20fd84d9636e1236b244c3 300 PRINTS PR01469 Bacterial carbamate kinase signature 151 170 3.9E-54 T 15-10-2018 AM378_00475 863f31310a20fd84d9636e1236b244c3 300 PRINTS PR01469 Bacterial carbamate kinase signature 103 122 3.9E-54 T 15-10-2018 AM378_00475 863f31310a20fd84d9636e1236b244c3 300 PRINTS PR01469 Bacterial carbamate kinase signature 174 192 3.9E-54 T 15-10-2018 AM378_00475 863f31310a20fd84d9636e1236b244c3 300 PRINTS PR01469 Bacterial carbamate kinase signature 204 219 3.9E-54 T 15-10-2018 AM378_00475 863f31310a20fd84d9636e1236b244c3 300 PRINTS PR01469 Bacterial carbamate kinase signature 42 61 3.9E-54 T 15-10-2018 AM378_00475 863f31310a20fd84d9636e1236b244c3 300 PRINTS PR01469 Bacterial carbamate kinase signature 255 270 3.9E-54 T 15-10-2018 AM378_04415 76d9a3176a2034bd76737caf1ab0f8b8 301 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 61 283 1.1E-35 T 15-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AM378_04415 76d9a3176a2034bd76737caf1ab0f8b8 301 Gene3D G3DSA:3.40.190.10 143 249 2.1E-37 T 15-10-2018 AM378_04415 76d9a3176a2034bd76737caf1ab0f8b8 301 SUPERFAMILY SSF53850 51 285 2.61E-40 T 15-10-2018 AM378_04415 76d9a3176a2034bd76737caf1ab0f8b8 301 SMART SM00062 57 286 1.6E-19 T 15-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AM378_04415 76d9a3176a2034bd76737caf1ab0f8b8 301 Gene3D G3DSA:3.40.190.10 56 282 2.1E-37 T 15-10-2018 AM378_01570 a80100c1a6409baca3229c031b6eb9d3 238 SUPERFAMILY SSF52540 2 207 1.55E-57 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_01570 a80100c1a6409baca3229c031b6eb9d3 238 Gene3D G3DSA:3.40.50.300 1 222 2.8E-63 T 15-10-2018 AM378_01570 a80100c1a6409baca3229c031b6eb9d3 238 SMART SM00382 12 192 4.2E-18 T 15-10-2018 IPR003593 AAA+ ATPase domain AM378_01570 a80100c1a6409baca3229c031b6eb9d3 238 ProSitePatterns PS00211 ABC transporters family signature. 120 134 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM378_01570 a80100c1a6409baca3229c031b6eb9d3 238 Pfam PF00005 ABC transporter 3 148 1.3E-31 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM378_08515 58582bc1618d08931b6aba0d24869091 434 Pfam PF01266 FAD dependent oxidoreductase 2 397 5.9E-74 T 15-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 AM378_08515 58582bc1618d08931b6aba0d24869091 434 Gene3D G3DSA:3.30.9.10 134 361 2.8E-49 T 15-10-2018 AM378_08515 58582bc1618d08931b6aba0d24869091 434 SUPERFAMILY SSF54373 269 359 1.44E-17 T 15-10-2018 AM378_08515 58582bc1618d08931b6aba0d24869091 434 Gene3D G3DSA:3.50.50.60 106 400 2.8E-49 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AM378_08515 58582bc1618d08931b6aba0d24869091 434 Gene3D G3DSA:3.50.50.60 1 84 6.9E-13 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AM378_08515 58582bc1618d08931b6aba0d24869091 434 SUPERFAMILY SSF51905 1 418 1.42E-53 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AM378_08515 58582bc1618d08931b6aba0d24869091 434 Hamap MF_01202 D-amino acid dehydrogenase [dadA]. 1 410 52.71 T 15-10-2018 IPR023080 D-amino acid dehydrogenase DadA GO:0008718|GO:0019478|GO:0055114 AM378_11345 55e10e59a3fa4724b26ac1767b02e219 313 SUPERFAMILY SSF53613 7 290 2.34E-67 T 15-10-2018 IPR029056 Ribokinase-like AM378_11345 55e10e59a3fa4724b26ac1767b02e219 313 Gene3D G3DSA:3.40.1190.20 2 310 2.2E-93 T 15-10-2018 IPR029056 Ribokinase-like AM378_11345 55e10e59a3fa4724b26ac1767b02e219 313 TIGRFAM TIGR03168 1-PFK: hexose kinase, 1-phosphofructokinase family 5 308 4.1E-99 T 15-10-2018 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 AM378_11345 55e10e59a3fa4724b26ac1767b02e219 313 Pfam PF00294 pfkB family carbohydrate kinase 14 292 2.0E-64 T 15-10-2018 IPR011611 Carbohydrate kinase PfkB AM378_11345 55e10e59a3fa4724b26ac1767b02e219 313 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 249 262 - T 15-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 AM378_11345 55e10e59a3fa4724b26ac1767b02e219 313 TIGRFAM TIGR03828 pfkB: 1-phosphofructokinase 5 308 9.4E-101 T 15-10-2018 IPR022463 Fructose 1-phosphate kinase GO:0008662 KEGG: 00051+2.7.1.56 AM378_11345 55e10e59a3fa4724b26ac1767b02e219 313 PIRSF PIRSF000535 2 311 5.9E-117 T 15-10-2018 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 AM378_11345 55e10e59a3fa4724b26ac1767b02e219 313 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 39 63 - T 15-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 AM378_18370 020e48dee7d22feac9c4aaf365bcd6a9 248 SUPERFAMILY SSF53335 4 246 4.09E-77 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM378_18370 020e48dee7d22feac9c4aaf365bcd6a9 248 Hamap MF_01523 Ribosomal RNA small subunit methyltransferase J [rsmJ]. 3 248 38.45 T 15-10-2018 IPR007536 Ribosomal RNA small subunit methyltransferase J GO:0008990|GO:0031167 AM378_18370 020e48dee7d22feac9c4aaf365bcd6a9 248 Gene3D G3DSA:3.40.50.150 57 248 2.2E-74 T 15-10-2018 AM378_18370 020e48dee7d22feac9c4aaf365bcd6a9 248 Pfam PF04445 Putative SAM-dependent methyltransferase 19 246 2.5E-109 T 15-10-2018 IPR007536 Ribosomal RNA small subunit methyltransferase J GO:0008990|GO:0031167 AM378_18370 020e48dee7d22feac9c4aaf365bcd6a9 248 Gene3D G3DSA:3.40.1630.10 1 56 1.2E-31 T 15-10-2018 AM378_06620 b56ac4ed25b90cbd1379042fc3b0af26 572 SUPERFAMILY SSF56601 229 563 1.54E-77 T 15-10-2018 IPR012338 Beta-lactamase/transpeptidase-like AM378_06620 b56ac4ed25b90cbd1379042fc3b0af26 572 Gene3D G3DSA:3.30.450.330 230 544 3.6E-93 T 15-10-2018 AM378_06620 b56ac4ed25b90cbd1379042fc3b0af26 572 Gene3D G3DSA:3.90.1310.30 52 228 2.2E-38 T 15-10-2018 AM378_06620 b56ac4ed25b90cbd1379042fc3b0af26 572 Gene3D G3DSA:3.40.710.10 289 470 3.6E-93 T 15-10-2018 AM378_06620 b56ac4ed25b90cbd1379042fc3b0af26 572 Hamap MF_02080 Peptidoglycan D,D-transpeptidase FtsI [ftsI]. 12 564 39.148 T 15-10-2018 IPR037532 Peptidoglycan D,D-transpeptidase FtsI GO:0005887|GO:0008658|GO:0008955|GO:0009252|GO:0051301 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AM378_06620 b56ac4ed25b90cbd1379042fc3b0af26 572 SUPERFAMILY SSF56519 55 227 1.7E-37 T 15-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 AM378_06620 b56ac4ed25b90cbd1379042fc3b0af26 572 Pfam PF03717 Penicillin-binding Protein dimerisation domain 61 214 1.9E-16 T 15-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 AM378_06620 b56ac4ed25b90cbd1379042fc3b0af26 572 Pfam PF00905 Penicillin binding protein transpeptidase domain 253 548 2.8E-70 T 15-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 AM378_05255 56462451091d62e357177480933af45b 539 Hamap MF_00453 Phosphoenolpyruvate carboxykinase (ATP) [pckA]. 15 537 54.953 T 15-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 AM378_05255 56462451091d62e357177480933af45b 539 TIGRFAM TIGR00224 pckA: phosphoenolpyruvate carboxykinase (ATP) 7 538 1.4E-274 T 15-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 AM378_05255 56462451091d62e357177480933af45b 539 SUPERFAMILY SSF68923 8 226 1.2E-88 T 15-10-2018 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 AM378_05255 56462451091d62e357177480933af45b 539 PIRSF PIRSF006294 2 539 7.1E-227 T 15-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 AM378_05255 56462451091d62e357177480933af45b 539 Pfam PF01293 Phosphoenolpyruvate carboxykinase 21 489 1.1E-209 T 15-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 AM378_05255 56462451091d62e357177480933af45b 539 Gene3D G3DSA:3.90.228.20 234 524 5.3E-233 T 15-10-2018 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 AM378_05255 56462451091d62e357177480933af45b 539 ProSitePatterns PS00532 Phosphoenolpyruvate carboxykinase (ATP) signature. 264 279 - T 15-10-2018 IPR015994 Phosphoenolpyruvate carboxykinase (ATP), conserved site GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 AM378_05255 56462451091d62e357177480933af45b 539 SUPERFAMILY SSF53795 228 538 2.24E-126 T 15-10-2018 AM378_05255 56462451091d62e357177480933af45b 539 Gene3D G3DSA:3.40.449.10 22 233 5.3E-233 T 15-10-2018 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 AM378_05255 56462451091d62e357177480933af45b 539 Gene3D G3DSA:2.170.8.10 46 349 5.3E-233 T 15-10-2018 AM378_15970 76e9d2bfe1016a0752418600f4734dda 649 Gene3D G3DSA:3.30.450.40 20 200 2.4E-51 T 15-10-2018 IPR029016 GAF-like domain superfamily AM378_15970 76e9d2bfe1016a0752418600f4734dda 649 Pfam PF00158 Sigma-54 interaction domain 341 501 2.1E-34 T 15-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 AM378_15970 76e9d2bfe1016a0752418600f4734dda 649 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 361 374 - T 15-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 AM378_15970 76e9d2bfe1016a0752418600f4734dda 649 SUPERFAMILY SSF55785 217 311 7.15E-9 T 15-10-2018 IPR035965 PAS domain superfamily AM378_15970 76e9d2bfe1016a0752418600f4734dda 649 SUPERFAMILY SSF52540 343 576 3.7E-42 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_15970 76e9d2bfe1016a0752418600f4734dda 649 SMART SM00091 213 280 3.5E-7 T 15-10-2018 IPR000014 PAS domain AM378_15970 76e9d2bfe1016a0752418600f4734dda 649 Pfam PF02954 Bacterial regulatory protein, Fis family 598 638 1.5E-11 T 15-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AM378_15970 76e9d2bfe1016a0752418600f4734dda 649 Pfam PF00989 PAS fold 215 314 3.5E-11 T 15-10-2018 IPR013767 PAS fold GO:0006355 AM378_15970 76e9d2bfe1016a0752418600f4734dda 649 Gene3D G3DSA:3.30.450.20 223 326 8.0E-22 T 15-10-2018 AM378_15970 76e9d2bfe1016a0752418600f4734dda 649 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 621 641 5.1E-6 T 15-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AM378_15970 76e9d2bfe1016a0752418600f4734dda 649 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 604 621 5.1E-6 T 15-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AM378_15970 76e9d2bfe1016a0752418600f4734dda 649 Gene3D G3DSA:1.10.8.60 506 580 1.2E-16 T 15-10-2018 AM378_15970 76e9d2bfe1016a0752418600f4734dda 649 Gene3D G3DSA:3.40.50.300 327 505 2.0E-42 T 15-10-2018 AM378_15970 76e9d2bfe1016a0752418600f4734dda 649 SUPERFAMILY SSF46689 565 641 7.17E-12 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AM378_15970 76e9d2bfe1016a0752418600f4734dda 649 Gene3D G3DSA:1.10.10.60 597 640 1.4E-12 T 15-10-2018 AM378_14840 5d57e0acf23918453821ce01e4515f8a 505 PIRSF PIRSF039101 1 505 1.7E-203 T 15-10-2018 IPR034762 Bacterial/eukaryotic lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 AM378_14840 5d57e0acf23918453821ce01e4515f8a 505 Gene3D G3DSA:2.40.50.140 15 154 2.0E-43 T 15-10-2018 AM378_14840 5d57e0acf23918453821ce01e4515f8a 505 SUPERFAMILY SSF55681 162 502 1.99E-124 T 15-10-2018 AM378_14840 5d57e0acf23918453821ce01e4515f8a 505 SUPERFAMILY SSF50249 13 155 6.61E-47 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold AM378_14840 5d57e0acf23918453821ce01e4515f8a 505 Gene3D G3DSA:3.30.930.10 155 499 7.2E-138 T 15-10-2018 AM378_14840 5d57e0acf23918453821ce01e4515f8a 505 Pfam PF00152 tRNA synthetases class II (D, K and N) 162 501 1.5E-85 T 15-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM378_14840 5d57e0acf23918453821ce01e4515f8a 505 Pfam PF01336 OB-fold nucleic acid binding domain 68 146 1.9E-15 T 15-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 AM378_14840 5d57e0acf23918453821ce01e4515f8a 505 TIGRFAM TIGR00499 lysS_bact: lysine--tRNA ligase 14 505 6.3E-233 T 15-10-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 AM378_14840 5d57e0acf23918453821ce01e4515f8a 505 PRINTS PR00982 Lysyl-tRNA synthetase signature 199 209 1.6E-39 T 15-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 AM378_14840 5d57e0acf23918453821ce01e4515f8a 505 PRINTS PR00982 Lysyl-tRNA synthetase signature 262 279 1.6E-39 T 15-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 AM378_14840 5d57e0acf23918453821ce01e4515f8a 505 PRINTS PR00982 Lysyl-tRNA synthetase signature 215 231 1.6E-39 T 15-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 AM378_14840 5d57e0acf23918453821ce01e4515f8a 505 PRINTS PR00982 Lysyl-tRNA synthetase signature 244 257 1.6E-39 T 15-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 AM378_14840 5d57e0acf23918453821ce01e4515f8a 505 PRINTS PR00982 Lysyl-tRNA synthetase signature 386 402 1.6E-39 T 15-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 AM378_14840 5d57e0acf23918453821ce01e4515f8a 505 Hamap MF_00252 Lysine--tRNA ligase [lysS]. 21 505 45.351 T 15-10-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 AM378_20055 a6b1fe34334db7e5ce7105b342c183fa 467 ProSitePatterns PS00218 Amino acid permeases signature. 43 73 - T 15-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 AM378_20055 a6b1fe34334db7e5ce7105b342c183fa 467 Pfam PF00324 Amino acid permease 18 430 3.7E-104 T 15-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 AM378_20055 a6b1fe34334db7e5ce7105b342c183fa 467 PIRSF PIRSF006060 1 467 3.6E-61 T 15-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 AM378_20055 a6b1fe34334db7e5ce7105b342c183fa 467 Gene3D G3DSA:1.20.1740.10 11 465 2.2E-53 T 15-10-2018 AM378_11660 80c0cbda1e98e3385efeec3d23e0c6b1 398 SMART SM00852 5 172 1.2E-36 T 15-10-2018 IPR001453 MoaB/Mog domain AM378_11660 80c0cbda1e98e3385efeec3d23e0c6b1 398 Gene3D G3DSA:3.40.980.10 1 172 3.1E-48 T 15-10-2018 IPR036425 MoaB/Mog-like domain superfamily AM378_11660 80c0cbda1e98e3385efeec3d23e0c6b1 398 SUPERFAMILY SSF53218 2 192 8.11E-35 T 15-10-2018 IPR036425 MoaB/Mog-like domain superfamily AM378_11660 80c0cbda1e98e3385efeec3d23e0c6b1 398 SUPERFAMILY SSF142433 250 379 2.75E-5 T 15-10-2018 IPR036653 CinA-like, C-terminal AM378_11660 80c0cbda1e98e3385efeec3d23e0c6b1 398 TIGRFAM TIGR00200 cinA_nterm: competence/damage-inducible protein CinA N-terminal domain 1 397 1.1E-121 T 15-10-2018 IPR008135 Competence-induced protein CinA AM378_11660 80c0cbda1e98e3385efeec3d23e0c6b1 398 PIRSF PIRSF006728 1 385 2.5E-105 T 15-10-2018 IPR008135 Competence-induced protein CinA AM378_11660 80c0cbda1e98e3385efeec3d23e0c6b1 398 Hamap MF_00226_B Putative competence-damage inducible protein [cinA]. 1 398 115.491 T 15-10-2018 IPR008135 Competence-induced protein CinA AM378_11660 80c0cbda1e98e3385efeec3d23e0c6b1 398 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 2 165 2.0E-31 T 15-10-2018 IPR001453 MoaB/Mog domain AM378_11660 80c0cbda1e98e3385efeec3d23e0c6b1 398 Pfam PF00994 Probable molybdopterin binding domain 6 170 3.4E-31 T 15-10-2018 IPR001453 MoaB/Mog domain AM378_13055 0864c603a84b9d8fd77399819099cf71 450 SUPERFAMILY SSF53067 1 204 3.88E-27 T 15-10-2018 AM378_13055 0864c603a84b9d8fd77399819099cf71 450 Gene3D G3DSA:3.30.420.40 385 431 3.3E-11 T 15-10-2018 AM378_13055 0864c603a84b9d8fd77399819099cf71 450 SUPERFAMILY SSF53067 207 447 3.96E-30 T 15-10-2018 AM378_13055 0864c603a84b9d8fd77399819099cf71 450 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 213 226 - T 15-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 AM378_13055 0864c603a84b9d8fd77399819099cf71 450 Pfam PF00012 Hsp70 protein 330 422 4.2E-6 T 15-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AM378_13055 0864c603a84b9d8fd77399819099cf71 450 Pfam PF00012 Hsp70 protein 3 228 8.0E-14 T 15-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AM378_13055 0864c603a84b9d8fd77399819099cf71 450 Gene3D G3DSA:3.90.640.10 311 384 3.3E-11 T 15-10-2018 AM378_14420 7905fdffac42c100936a4caba45ccde3 144 SUPERFAMILY SSF82649 3 142 8.37E-43 T 15-10-2018 AM378_14420 7905fdffac42c100936a4caba45ccde3 144 Gene3D G3DSA:3.90.1010.10 1 143 8.8E-49 T 15-10-2018 AM378_14420 7905fdffac42c100936a4caba45ccde3 144 TIGRFAM TIGR03391 FeS_syn_CsdE: cysteine desulfurase, sulfur acceptor subunit CsdE 3 140 5.5E-71 T 15-10-2018 IPR017763 Cysteine desulfurase, sulphur acceptor subunit CsdE AM378_14420 7905fdffac42c100936a4caba45ccde3 144 Pfam PF02657 Fe-S metabolism associated domain 18 138 1.3E-38 T 15-10-2018 IPR003808 Fe-S metabolism associated domain, SufE-like AM378_12615 da1d401f0c4a83489ae144f100ea45e0 293 TIGRFAM TIGR01136 cysKM: cysteine synthase 5 292 2.0E-123 T 15-10-2018 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 AM378_12615 da1d401f0c4a83489ae144f100ea45e0 293 Gene3D G3DSA:3.40.50.1100 8 288 9.1E-113 T 15-10-2018 AM378_12615 da1d401f0c4a83489ae144f100ea45e0 293 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 30 48 - T 15-10-2018 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 AM378_12615 da1d401f0c4a83489ae144f100ea45e0 293 SUPERFAMILY SSF53686 4 289 1.7E-92 T 15-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme AM378_12615 da1d401f0c4a83489ae144f100ea45e0 293 TIGRFAM TIGR01138 cysM: cysteine synthase B 3 292 7.2E-154 T 15-10-2018 IPR005858 Cysteine synthase CysM GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 AM378_12615 da1d401f0c4a83489ae144f100ea45e0 293 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 5 281 6.0E-68 T 15-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme AM378_12615 da1d401f0c4a83489ae144f100ea45e0 293 Gene3D G3DSA:3.40.50.1100 35 140 9.1E-113 T 15-10-2018 AM378_13565 829a01b1c53eb6ed8e8b9c64405caf20 478 Pfam PF00884 Sulfatase 174 433 2.2E-31 T 15-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 AM378_13565 829a01b1c53eb6ed8e8b9c64405caf20 478 SUPERFAMILY SSF53649 174 442 4.14E-22 T 15-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 AM378_13565 829a01b1c53eb6ed8e8b9c64405caf20 478 Gene3D G3DSA:3.40.720.10 163 446 1.3E-47 T 15-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 AM378_00400 084968ba23f1d439974931d6f2f242bc 304 Gene3D G3DSA:3.40.190.10 168 268 1.7E-13 T 15-10-2018 AM378_00400 084968ba23f1d439974931d6f2f242bc 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 7.1E-5 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_00400 084968ba23f1d439974931d6f2f242bc 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 7.1E-5 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_00400 084968ba23f1d439974931d6f2f242bc 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 7.1E-5 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_00400 084968ba23f1d439974931d6f2f242bc 304 SUPERFAMILY SSF53850 107 292 2.53E-23 T 15-10-2018 AM378_00400 084968ba23f1d439974931d6f2f242bc 304 Gene3D G3DSA:1.10.10.10 2 95 2.8E-23 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_00400 084968ba23f1d439974931d6f2f242bc 304 SUPERFAMILY SSF46785 3 88 4.18E-23 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM378_00400 084968ba23f1d439974931d6f2f242bc 304 Gene3D G3DSA:3.40.190.10 108 275 1.7E-13 T 15-10-2018 AM378_00400 084968ba23f1d439974931d6f2f242bc 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 63 1.3E-19 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_00400 084968ba23f1d439974931d6f2f242bc 304 Pfam PF03466 LysR substrate binding domain 92 291 8.0E-21 T 15-10-2018 IPR005119 LysR, substrate-binding AM378_02540 8fe0a7263ab56a848271fb077d92b632 412 Pfam PF03454 MoeA C-terminal region (domain IV) 334 406 1.1E-17 T 15-10-2018 IPR005111 MoeA, C-terminal, domain IV GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AM378_02540 8fe0a7263ab56a848271fb077d92b632 412 ProSitePatterns PS01079 Molybdenum cofactor biosynthesis proteins signature 2. 256 289 - T 15-10-2018 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 Reactome: R-HSA-947581 AM378_02540 8fe0a7263ab56a848271fb077d92b632 412 SUPERFAMILY SSF53218 180 326 1.14E-44 T 15-10-2018 IPR036425 MoaB/Mog-like domain superfamily AM378_02540 8fe0a7263ab56a848271fb077d92b632 412 Pfam PF03453 MoeA N-terminal region (domain I and II) 10 170 4.4E-45 T 15-10-2018 IPR005110 MoeA, N-terminal and linker domain GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AM378_02540 8fe0a7263ab56a848271fb077d92b632 412 SUPERFAMILY SSF63867 330 410 1.83E-23 T 15-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AM378_02540 8fe0a7263ab56a848271fb077d92b632 412 Pfam PF00994 Probable molybdopterin binding domain 183 319 1.7E-26 T 15-10-2018 IPR001453 MoaB/Mog domain AM378_02540 8fe0a7263ab56a848271fb077d92b632 412 SUPERFAMILY SSF63882 6 179 9.29E-57 T 15-10-2018 IPR036135 MoeA, N-terminal and linker domain superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AM378_02540 8fe0a7263ab56a848271fb077d92b632 412 SMART SM00852 183 320 2.5E-45 T 15-10-2018 IPR001453 MoaB/Mog domain AM378_02540 8fe0a7263ab56a848271fb077d92b632 412 Gene3D G3DSA:2.170.190.11 53 144 1.7E-150 T 15-10-2018 AM378_02540 8fe0a7263ab56a848271fb077d92b632 412 Gene3D G3DSA:2.40.340.10 331 401 1.7E-150 T 15-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AM378_02540 8fe0a7263ab56a848271fb077d92b632 412 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 179 316 4.2E-34 T 15-10-2018 IPR001453 MoaB/Mog domain AM378_02540 8fe0a7263ab56a848271fb077d92b632 412 Gene3D G3DSA:3.90.105.10 29 177 1.7E-150 T 15-10-2018 AM378_02540 8fe0a7263ab56a848271fb077d92b632 412 Gene3D G3DSA:3.40.980.10 28 330 1.7E-150 T 15-10-2018 IPR036425 MoaB/Mog-like domain superfamily AM378_21015 9c8b32e9864828f9c7aa83517538ef37 504 ProSitePatterns PS01050 YjeF C-terminal domain signature 2. 438 448 - T 15-10-2018 IPR017953 Carbohydrate kinase, predicted, conserved site AM378_21015 9c8b32e9864828f9c7aa83517538ef37 504 Hamap MF_01966 NAD(P)H-hydrate epimerase [nnrE]. 19 220 22.937 T 15-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 AM378_21015 9c8b32e9864828f9c7aa83517538ef37 504 Pfam PF01256 Carbohydrate kinase 258 492 3.7E-71 T 15-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 AM378_21015 9c8b32e9864828f9c7aa83517538ef37 504 TIGRFAM TIGR00197 yjeF_nterm: YjeF family N-terminal domain 24 219 1.3E-51 T 15-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 AM378_21015 9c8b32e9864828f9c7aa83517538ef37 504 Gene3D G3DSA:3.40.1190.20 228 499 4.7E-84 T 15-10-2018 IPR029056 Ribokinase-like AM378_21015 9c8b32e9864828f9c7aa83517538ef37 504 Hamap MF_01965 ADP-dependent (S)-NAD(P)H-hydrate dehydratase [nnrD]. 234 503 23.108 T 15-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 AM378_21015 9c8b32e9864828f9c7aa83517538ef37 504 Gene3D G3DSA:3.40.50.10260 17 224 3.3E-56 T 15-10-2018 IPR036652 YjeF N-terminal domain superfamily MetaCyc: PWY-6938 AM378_21015 9c8b32e9864828f9c7aa83517538ef37 504 Pfam PF03853 YjeF-related protein N-terminus 40 199 1.5E-42 T 15-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 AM378_21015 9c8b32e9864828f9c7aa83517538ef37 504 SUPERFAMILY SSF64153 17 256 1.1E-61 T 15-10-2018 IPR036652 YjeF N-terminal domain superfamily MetaCyc: PWY-6938 AM378_21015 9c8b32e9864828f9c7aa83517538ef37 504 SUPERFAMILY SSF53613 231 495 6.76E-74 T 15-10-2018 IPR029056 Ribokinase-like AM378_21015 9c8b32e9864828f9c7aa83517538ef37 504 TIGRFAM TIGR00196 yjeF_cterm: YjeF family C-terminal domain 232 496 2.5E-81 T 15-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 AM378_21015 9c8b32e9864828f9c7aa83517538ef37 504 PIRSF PIRSF017184 15 504 2.0E-146 T 15-10-2018 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr GO:0052855 MetaCyc: PWY-6938 AM378_17060 03f6a3de8bbfb551a096c5671fd509d1 359 SMART SM01005 233 357 3.1E-61 T 15-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AM378_17060 03f6a3de8bbfb551a096c5671fd509d1 359 Hamap MF_01201 Alanine racemase. 1 357 34.458 T 15-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AM378_17060 03f6a3de8bbfb551a096c5671fd509d1 359 Gene3D G3DSA:2.40.37.10 8 352 3.6E-133 T 15-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 AM378_17060 03f6a3de8bbfb551a096c5671fd509d1 359 PRINTS PR00992 Alanine racemase signature 339 352 8.3E-72 T 15-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AM378_17060 03f6a3de8bbfb551a096c5671fd509d1 359 PRINTS PR00992 Alanine racemase signature 192 219 8.3E-72 T 15-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AM378_17060 03f6a3de8bbfb551a096c5671fd509d1 359 PRINTS PR00992 Alanine racemase signature 155 166 8.3E-72 T 15-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AM378_17060 03f6a3de8bbfb551a096c5671fd509d1 359 PRINTS PR00992 Alanine racemase signature 287 304 8.3E-72 T 15-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AM378_17060 03f6a3de8bbfb551a096c5671fd509d1 359 PRINTS PR00992 Alanine racemase signature 249 264 8.3E-72 T 15-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AM378_17060 03f6a3de8bbfb551a096c5671fd509d1 359 PRINTS PR00992 Alanine racemase signature 60 78 8.3E-72 T 15-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AM378_17060 03f6a3de8bbfb551a096c5671fd509d1 359 PRINTS PR00992 Alanine racemase signature 120 132 8.3E-72 T 15-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AM378_17060 03f6a3de8bbfb551a096c5671fd509d1 359 PRINTS PR00992 Alanine racemase signature 26 42 8.3E-72 T 15-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AM378_17060 03f6a3de8bbfb551a096c5671fd509d1 359 PRINTS PR00992 Alanine racemase signature 266 281 8.3E-72 T 15-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AM378_17060 03f6a3de8bbfb551a096c5671fd509d1 359 Pfam PF00842 Alanine racemase, C-terminal domain 233 356 2.0E-39 T 15-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AM378_17060 03f6a3de8bbfb551a096c5671fd509d1 359 SUPERFAMILY SSF51419 8 234 3.05E-71 T 15-10-2018 IPR029066 PLP-binding barrel AM378_17060 03f6a3de8bbfb551a096c5671fd509d1 359 TIGRFAM TIGR00492 alr: alanine racemase 3 357 2.3E-136 T 15-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AM378_17060 03f6a3de8bbfb551a096c5671fd509d1 359 Gene3D G3DSA:3.20.20.10 10 217 3.6E-133 T 15-10-2018 IPR029066 PLP-binding barrel AM378_17060 03f6a3de8bbfb551a096c5671fd509d1 359 SUPERFAMILY SSF50621 227 358 1.95E-43 T 15-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 AM378_17060 03f6a3de8bbfb551a096c5671fd509d1 359 Pfam PF01168 Alanine racemase, N-terminal domain 8 219 6.2E-71 T 15-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AM378_17060 03f6a3de8bbfb551a096c5671fd509d1 359 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 31 41 - T 15-10-2018 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AM378_12550 155289496a426e0425b08d21a19f0d15 155 Pfam PF14282 FlxA-like protein 63 146 5.3E-18 T 15-10-2018 IPR025577 FlxA-like protein AM378_13060 5642edbd719b89ece45e47b029df0c91 188 SUPERFAMILY SSF55729 2 157 6.76E-41 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase AM378_13060 5642edbd719b89ece45e47b029df0c91 188 Pfam PF13302 Acetyltransferase (GNAT) domain 11 152 3.4E-36 T 15-10-2018 IPR000182 GNAT domain AM378_13060 5642edbd719b89ece45e47b029df0c91 188 Gene3D G3DSA:3.40.630.30 1 160 2.8E-47 T 15-10-2018 AM378_19130 9133bde9a9c878fb80c42e42748eef85 214 Gene3D G3DSA:3.40.50.300 4 204 4.0E-60 T 15-10-2018 AM378_19130 9133bde9a9c878fb80c42e42748eef85 214 Hamap MF_00321 Probable GTP-binding protein EngB [engB]. 16 199 28.281 T 15-10-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 AM378_19130 9133bde9a9c878fb80c42e42748eef85 214 SUPERFAMILY SSF52540 18 201 2.22E-36 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_19130 9133bde9a9c878fb80c42e42748eef85 214 Pfam PF01926 50S ribosome-binding GTPase 30 148 5.0E-21 T 15-10-2018 IPR006073 GTP binding domain GO:0005525 AM378_19130 9133bde9a9c878fb80c42e42748eef85 214 TIGRFAM TIGR03598 GTPase_YsxC: ribosome biogenesis GTP-binding protein YsxC 12 195 3.9E-74 T 15-10-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 AM378_20520 bdff34e5fb7247f9d8a7ecd9d5e4691a 483 TIGRFAM TIGR00933 2a38: potassium uptake protein, TrkH family 84 466 5.2E-124 T 15-10-2018 IPR004772 TrkH potassium transport family GO:0015379|GO:0016021|GO:0071805 AM378_20520 bdff34e5fb7247f9d8a7ecd9d5e4691a 483 PIRSF PIRSF006247 1 483 2.8E-181 T 15-10-2018 IPR004772 TrkH potassium transport family GO:0015379|GO:0016021|GO:0071805 AM378_20520 bdff34e5fb7247f9d8a7ecd9d5e4691a 483 Pfam PF02386 Cation transport protein 37 477 6.3E-89 T 15-10-2018 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 AM378_00210 6e4ce87454039dee67f49c198573be1a 84 Hamap MF_00502 50S ribosomal protein L31 type B [rpmE2]. 1 80 25.951 T 15-10-2018 IPR027493 Ribosomal protein L31 type B GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM378_00210 6e4ce87454039dee67f49c198573be1a 84 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 79 2.6E-16 T 15-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM378_00210 6e4ce87454039dee67f49c198573be1a 84 Gene3D G3DSA:2.30.170.50 1 82 4.6E-22 T 15-10-2018 AM378_00210 6e4ce87454039dee67f49c198573be1a 84 SUPERFAMILY SSF143800 1 80 1.53E-20 T 15-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM378_00210 6e4ce87454039dee67f49c198573be1a 84 PRINTS PR01249 Ribosomal protein L31 signature 59 77 1.1E-13 T 15-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM378_00210 6e4ce87454039dee67f49c198573be1a 84 PRINTS PR01249 Ribosomal protein L31 signature 2 19 1.1E-13 T 15-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM378_00210 6e4ce87454039dee67f49c198573be1a 84 PRINTS PR01249 Ribosomal protein L31 signature 44 59 1.1E-13 T 15-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM378_00210 6e4ce87454039dee67f49c198573be1a 84 Pfam PF01197 Ribosomal protein L31 1 78 3.0E-22 T 15-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM378_23775 e952d63856aac07468566f7247097fbd 185 Pfam PF00196 Bacterial regulatory proteins, luxR family 125 175 8.4E-7 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM378_23775 e952d63856aac07468566f7247097fbd 185 SUPERFAMILY SSF46894 122 174 3.74E-9 T 15-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AM378_23775 e952d63856aac07468566f7247097fbd 185 Gene3D G3DSA:1.10.10.10 81 182 8.1E-8 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_23775 e952d63856aac07468566f7247097fbd 185 SMART SM00421 123 180 0.0042 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM378_13310 19b406b8055f4cfcccfd4890bc1ea8ca 496 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 72 90 3.3E-9 T 15-10-2018 IPR006073 GTP binding domain GO:0005525 AM378_13310 19b406b8055f4cfcccfd4890bc1ea8ca 496 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 3.3E-9 T 15-10-2018 IPR006073 GTP binding domain GO:0005525 AM378_13310 19b406b8055f4cfcccfd4890bc1ea8ca 496 Gene3D G3DSA:3.40.50.300 2 159 3.2E-43 T 15-10-2018 AM378_13310 19b406b8055f4cfcccfd4890bc1ea8ca 496 Pfam PF01926 50S ribosome-binding GTPase 211 328 7.9E-24 T 15-10-2018 IPR006073 GTP binding domain GO:0005525 AM378_13310 19b406b8055f4cfcccfd4890bc1ea8ca 496 Pfam PF01926 50S ribosome-binding GTPase 5 119 2.2E-27 T 15-10-2018 IPR006073 GTP binding domain GO:0005525 AM378_13310 19b406b8055f4cfcccfd4890bc1ea8ca 496 TIGRFAM TIGR03594 GTPase_EngA: ribosome-associated GTPase EngA 3 464 1.2E-178 T 15-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 AM378_13310 19b406b8055f4cfcccfd4890bc1ea8ca 496 Pfam PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 384 464 1.1E-25 T 15-10-2018 IPR032859 GTPase Der, C-terminal KH-domain-like AM378_13310 19b406b8055f4cfcccfd4890bc1ea8ca 496 Gene3D G3DSA:3.40.50.300 205 381 4.9E-48 T 15-10-2018 AM378_13310 19b406b8055f4cfcccfd4890bc1ea8ca 496 SUPERFAMILY SSF52540 208 470 3.09E-59 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_13310 19b406b8055f4cfcccfd4890bc1ea8ca 496 PIRSF PIRSF006485 1 472 3.6E-180 T 15-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 AM378_13310 19b406b8055f4cfcccfd4890bc1ea8ca 496 Hamap MF_00195 GTPase Der [der]. 2 467 39.147 T 15-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 AM378_13310 19b406b8055f4cfcccfd4890bc1ea8ca 496 Gene3D G3DSA:3.30.300.20 384 466 2.1E-20 T 15-10-2018 IPR015946 K homology domain-like, alpha/beta AM378_13310 19b406b8055f4cfcccfd4890bc1ea8ca 496 SUPERFAMILY SSF52540 4 164 5.51E-44 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_13310 19b406b8055f4cfcccfd4890bc1ea8ca 496 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 208 372 6.3E-21 T 15-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 AM378_13310 19b406b8055f4cfcccfd4890bc1ea8ca 496 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 4 158 3.5E-20 T 15-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 AM378_17380 da5fec24902e76677c8c8a95a0e5832a 458 Gene3D G3DSA:3.40.50.720 233 366 2.2E-36 T 15-10-2018 AM378_17380 da5fec24902e76677c8c8a95a0e5832a 458 PRINTS PR00335 TrkA potassium uptake protein signature 49 59 1.0E-35 T 15-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 AM378_17380 da5fec24902e76677c8c8a95a0e5832a 458 PRINTS PR00335 TrkA potassium uptake protein signature 19 33 1.0E-35 T 15-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 AM378_17380 da5fec24902e76677c8c8a95a0e5832a 458 PRINTS PR00335 TrkA potassium uptake protein signature 60 70 1.0E-35 T 15-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 AM378_17380 da5fec24902e76677c8c8a95a0e5832a 458 PRINTS PR00335 TrkA potassium uptake protein signature 73 87 1.0E-35 T 15-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 AM378_17380 da5fec24902e76677c8c8a95a0e5832a 458 PRINTS PR00335 TrkA potassium uptake protein signature 2 16 1.0E-35 T 15-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 AM378_17380 da5fec24902e76677c8c8a95a0e5832a 458 SUPERFAMILY SSF51735 232 376 5.05E-33 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily AM378_17380 da5fec24902e76677c8c8a95a0e5832a 458 SUPERFAMILY SSF116726 148 226 6.02E-10 T 15-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 AM378_17380 da5fec24902e76677c8c8a95a0e5832a 458 SUPERFAMILY SSF116726 390 440 3.01E-7 T 15-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 AM378_17380 da5fec24902e76677c8c8a95a0e5832a 458 SUPERFAMILY SSF51735 1 152 5.46E-37 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily AM378_17380 da5fec24902e76677c8c8a95a0e5832a 458 Pfam PF02254 TrkA-N domain 235 350 6.7E-26 T 15-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 AM378_17380 da5fec24902e76677c8c8a95a0e5832a 458 Pfam PF02254 TrkA-N domain 3 124 3.9E-30 T 15-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 AM378_17380 da5fec24902e76677c8c8a95a0e5832a 458 Gene3D G3DSA:3.30.70.1450 140 232 3.4E-22 T 15-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 AM378_17380 da5fec24902e76677c8c8a95a0e5832a 458 Gene3D G3DSA:3.30.70.1450 367 458 2.4E-28 T 15-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 AM378_17380 da5fec24902e76677c8c8a95a0e5832a 458 Gene3D G3DSA:3.40.50.720 2 139 7.5E-51 T 15-10-2018 AM378_17380 da5fec24902e76677c8c8a95a0e5832a 458 Pfam PF02080 TrkA-C domain 156 225 1.3E-11 T 15-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AM378_17380 da5fec24902e76677c8c8a95a0e5832a 458 Pfam PF02080 TrkA-C domain 390 451 2.3E-10 T 15-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AM378_11580 f7177a88facf7dfe39a10b34a06f495b 192 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 14 27 4.8E-8 T 15-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM378_11580 f7177a88facf7dfe39a10b34a06f495b 192 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 35 58 4.8E-8 T 15-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM378_11580 f7177a88facf7dfe39a10b34a06f495b 192 SUPERFAMILY SSF48498 93 185 2.06E-13 T 15-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AM378_11580 f7177a88facf7dfe39a10b34a06f495b 192 Pfam PF00440 Bacterial regulatory proteins, tetR family 14 59 2.1E-14 T 15-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM378_11580 f7177a88facf7dfe39a10b34a06f495b 192 SUPERFAMILY SSF46689 6 74 2.36E-17 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AM378_11580 f7177a88facf7dfe39a10b34a06f495b 192 Gene3D G3DSA:1.10.357.10 6 188 2.5E-51 T 15-10-2018 AM378_18070 01a37bbb37344ae57414c77897ad87ad 197 Pfam PF01914 MarC family integral membrane protein 2 194 4.9E-59 T 15-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 AM378_18070 01a37bbb37344ae57414c77897ad87ad 197 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 5 191 3.9E-31 T 15-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 AM378_22675 66d99fd8928f577c3123a9e5e00c65ad 968 Gene3D G3DSA:3.30.360.80 713 786 1.6E-31 T 15-10-2018 AM378_22675 66d99fd8928f577c3123a9e5e00c65ad 968 Gene3D G3DSA:2.30.30.140 1 53 1.2E-23 T 15-10-2018 AM378_22675 66d99fd8928f577c3123a9e5e00c65ad 968 Gene3D G3DSA:3.40.50.10810 631 712 1.5E-6 T 15-10-2018 IPR038718 SNF2-like, N-terminal domain superfamily AM378_22675 66d99fd8928f577c3123a9e5e00c65ad 968 Gene3D G3DSA:3.40.50.10810 150 428 6.0E-108 T 15-10-2018 IPR038718 SNF2-like, N-terminal domain superfamily AM378_22675 66d99fd8928f577c3123a9e5e00c65ad 968 SMART SM00490 517 601 1.2E-15 T 15-10-2018 IPR001650 Helicase, C-terminal AM378_22675 66d99fd8928f577c3123a9e5e00c65ad 968 Gene3D G3DSA:3.40.50.300 429 630 3.7E-47 T 15-10-2018 AM378_22675 66d99fd8928f577c3123a9e5e00c65ad 968 Pfam PF00271 Helicase conserved C-terminal domain 492 601 1.5E-15 T 15-10-2018 IPR001650 Helicase, C-terminal AM378_22675 66d99fd8928f577c3123a9e5e00c65ad 968 SUPERFAMILY SSF52540 273 643 3.16E-42 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_22675 66d99fd8928f577c3123a9e5e00c65ad 968 Hamap MF_01821 RNA polymerase-associated protein RapA [rapA]. 1 966 29.173 T 15-10-2018 IPR023949 RNA polymerase-associated protein RapA GO:0006355 AM378_22675 66d99fd8928f577c3123a9e5e00c65ad 968 Gene3D G3DSA:2.30.30.930 55 114 5.9E-31 T 15-10-2018 AM378_22675 66d99fd8928f577c3123a9e5e00c65ad 968 Pfam PF00176 SNF2 family N-terminal domain 174 441 3.5E-18 T 15-10-2018 IPR000330 SNF2-related, N-terminal domain GO:0005524 AM378_22675 66d99fd8928f577c3123a9e5e00c65ad 968 SUPERFAMILY SSF52540 128 378 2.61E-38 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_22675 66d99fd8928f577c3123a9e5e00c65ad 968 SMART SM00487 150 342 7.1E-20 T 15-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AM378_22675 66d99fd8928f577c3123a9e5e00c65ad 968 Pfam PF12137 RNA polymerase recycling family C-terminal 605 965 1.5E-156 T 15-10-2018 IPR022737 RNA polymerase recycling, bacterial, C-terminal GO:0016817 AM378_13450 a1de11bd7e354bfa07e753906404016e 636 Pfam PF13450 NAD(P)-binding Rossmann-like domain 82 142 1.2E-12 T 15-10-2018 AM378_13450 a1de11bd7e354bfa07e753906404016e 636 Gene3D G3DSA:3.50.50.60 74 150 2.4E-8 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AM378_13450 a1de11bd7e354bfa07e753906404016e 636 SUPERFAMILY SSF51905 76 626 1.3E-15 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AM378_07315 d34398d4d35ef5cce90a6fc394684575 340 Gene3D G3DSA:3.10.580.10 20 147 8.3E-21 T 15-10-2018 AM378_07315 d34398d4d35ef5cce90a6fc394684575 340 SUPERFAMILY SSF161093 167 338 8.5E-47 T 15-10-2018 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily GO:0006812|GO:0008324 AM378_07315 d34398d4d35ef5cce90a6fc394684575 340 SUPERFAMILY SSF54631 24 162 1.77E-19 T 15-10-2018 AM378_07315 d34398d4d35ef5cce90a6fc394684575 340 Gene3D G3DSA:1.10.357.20 162 338 3.2E-51 T 15-10-2018 IPR038048 Magnesium transporter MgtE, transmembrane domain AM378_07315 d34398d4d35ef5cce90a6fc394684575 340 Pfam PF01769 Divalent cation transporter 210 331 3.1E-27 T 15-10-2018 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 AM378_07315 d34398d4d35ef5cce90a6fc394684575 340 Pfam PF00571 CBS domain 92 142 0.0012 T 15-10-2018 IPR000644 CBS domain AM378_15800 605711424667f0c3bae7dde86922e626 483 PIRSF PIRSF037227 3 483 3.9E-234 T 15-10-2018 IPR017145 Aminobenzoyl-glutamate utilization protein B AM378_15800 605711424667f0c3bae7dde86922e626 483 Pfam PF07687 Peptidase dimerisation domain 190 281 1.7E-4 T 15-10-2018 IPR011650 Peptidase M20, dimerisation domain AM378_15800 605711424667f0c3bae7dde86922e626 483 Gene3D G3DSA:3.30.70.360 187 304 2.7E-83 T 15-10-2018 AM378_15800 605711424667f0c3bae7dde86922e626 483 Pfam PF01546 Peptidase family M20/M25/M40 100 189 1.4E-7 T 15-10-2018 IPR002933 Peptidase M20 GO:0016787 AM378_15800 605711424667f0c3bae7dde86922e626 483 SUPERFAMILY SSF53187 10 450 2.44E-60 T 15-10-2018 AM378_15800 605711424667f0c3bae7dde86922e626 483 Gene3D G3DSA:3.40.630.10 24 324 2.7E-83 T 15-10-2018 AM378_15800 605711424667f0c3bae7dde86922e626 483 Gene3D G3DSA:3.40.630.10 360 468 8.3E-19 T 15-10-2018 AM378_15800 605711424667f0c3bae7dde86922e626 483 SUPERFAMILY SSF55031 192 295 6.45E-18 T 15-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain AM378_15800 605711424667f0c3bae7dde86922e626 483 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 25 435 1.1E-102 T 15-10-2018 IPR017439 Amidohydrolase GO:0016787 AM378_04775 8d8e1ba31a8cb22fd07ded262c5a1354 1526 Gene3D G3DSA:3.40.50.300 265 414 1.3E-7 T 15-10-2018 AM378_04775 8d8e1ba31a8cb22fd07ded262c5a1354 1526 SUPERFAMILY SSF52540 270 469 3.37E-9 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_04775 8d8e1ba31a8cb22fd07ded262c5a1354 1526 SUPERFAMILY SSF48371 1071 1320 3.81E-5 T 15-10-2018 IPR016024 Armadillo-type fold AM378_04775 8d8e1ba31a8cb22fd07ded262c5a1354 1526 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 284 402 7.6E-7 T 15-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AM378_19030 48bd751accee1eb5a1a0b7634684a6ae 207 Gene3D G3DSA:3.40.50.300 8 183 1.3E-76 T 15-10-2018 AM378_19030 48bd751accee1eb5a1a0b7634684a6ae 207 Gene3D G3DSA:3.30.63.10 37 96 1.3E-76 T 15-10-2018 AM378_19030 48bd751accee1eb5a1a0b7634684a6ae 207 SUPERFAMILY SSF52540 3 189 4.7E-71 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_19030 48bd751accee1eb5a1a0b7634684a6ae 207 ProSitePatterns PS00856 Guanylate kinase-like signature. 40 57 - T 15-10-2018 IPR020590 Guanylate kinase, conserved site KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 AM378_19030 48bd751accee1eb5a1a0b7634684a6ae 207 SMART SM00072 3 187 1.3E-83 T 15-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit AM378_19030 48bd751accee1eb5a1a0b7634684a6ae 207 Pfam PF00625 Guanylate kinase 5 186 3.4E-69 T 15-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit AM378_19030 48bd751accee1eb5a1a0b7634684a6ae 207 Hamap MF_00328 Guanylate kinase [gmk]. 2 187 38.17 T 15-10-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 AM378_19030 48bd751accee1eb5a1a0b7634684a6ae 207 TIGRFAM TIGR03263 guanyl_kin: guanylate kinase 4 184 4.3E-76 T 15-10-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 AM378_23970 2fd81f61d86a6a8d79f4767cf865773e 182 Gene3D G3DSA:3.40.630.30 8 176 1.4E-37 T 15-10-2018 AM378_23970 2fd81f61d86a6a8d79f4767cf865773e 182 Pfam PF13302 Acetyltransferase (GNAT) domain 14 156 4.0E-27 T 15-10-2018 IPR000182 GNAT domain AM378_23970 2fd81f61d86a6a8d79f4767cf865773e 182 SUPERFAMILY SSF55729 10 162 2.88E-32 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase AM378_11170 ef923f4ad03a490db39dec982c5747b8 230 Gene3D G3DSA:3.40.225.10 1 230 8.6E-64 T 15-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily AM378_11170 ef923f4ad03a490db39dec982c5747b8 230 TIGRFAM TIGR00760 araD: L-ribulose-5-phosphate 4-epimerase 1 230 4.3E-123 T 15-10-2018 IPR004661 L-ribulose-5-phosphate 4-epimerase GO:0008270|GO:0008742|GO:0019572 KEGG: 00040+5.1.3.4|KEGG: 00053+5.1.3.4|MetaCyc: PWY-6961 AM378_11170 ef923f4ad03a490db39dec982c5747b8 230 SMART SM01007 7 197 2.9E-69 T 15-10-2018 IPR001303 Class II aldolase/adducin N-terminal AM378_11170 ef923f4ad03a490db39dec982c5747b8 230 SUPERFAMILY SSF53639 1 222 1.94E-70 T 15-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily AM378_11170 ef923f4ad03a490db39dec982c5747b8 230 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 8 195 1.7E-46 T 15-10-2018 IPR001303 Class II aldolase/adducin N-terminal AM378_18345 deece2d6448a802385c0e0f5793050c1 499 Pfam PF00005 ABC transporter 23 174 3.1E-27 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM378_18345 deece2d6448a802385c0e0f5793050c1 499 SUPERFAMILY SSF52540 261 488 5.85E-44 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_18345 deece2d6448a802385c0e0f5793050c1 499 ProSitePatterns PS00211 ABC transporters family signature. 402 416 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM378_18345 deece2d6448a802385c0e0f5793050c1 499 SMART SM00382 32 222 9.0E-7 T 15-10-2018 IPR003593 AAA+ ATPase domain AM378_18345 deece2d6448a802385c0e0f5793050c1 499 SMART SM00382 283 478 0.003 T 15-10-2018 IPR003593 AAA+ ATPase domain AM378_18345 deece2d6448a802385c0e0f5793050c1 499 Gene3D G3DSA:3.40.50.300 3 239 1.4E-53 T 15-10-2018 AM378_18345 deece2d6448a802385c0e0f5793050c1 499 SUPERFAMILY SSF52540 7 234 2.4E-53 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_18345 deece2d6448a802385c0e0f5793050c1 499 Gene3D G3DSA:3.40.50.300 254 498 7.3E-44 T 15-10-2018 AM378_18345 deece2d6448a802385c0e0f5793050c1 499 Pfam PF00005 ABC transporter 275 429 1.4E-23 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM378_14225 3dd92dbdb883426a97a8836eb405d780 129 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 7 126 1.4E-21 T 15-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AM378_14225 3dd92dbdb883426a97a8836eb405d780 129 SUPERFAMILY SSF54593 3 128 7.12E-33 T 15-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AM378_14225 3dd92dbdb883426a97a8836eb405d780 129 Gene3D G3DSA:3.10.180.10 9 128 5.6E-33 T 15-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AM378_00510 1914503ffa5c1fb7843740f0b7d983b9 468 TIGRFAM TIGR00879 SP: MFS transporter, sugar porter (SP) family 5 452 3.9E-147 T 15-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 AM378_00510 1914503ffa5c1fb7843740f0b7d983b9 468 PRINTS PR00171 Sugar transporter signature 380 392 2.0E-23 T 15-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 AM378_00510 1914503ffa5c1fb7843740f0b7d983b9 468 PRINTS PR00171 Sugar transporter signature 114 133 2.0E-23 T 15-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 AM378_00510 1914503ffa5c1fb7843740f0b7d983b9 468 PRINTS PR00171 Sugar transporter signature 31 41 2.0E-23 T 15-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 AM378_00510 1914503ffa5c1fb7843740f0b7d983b9 468 PRINTS PR00171 Sugar transporter signature 357 378 2.0E-23 T 15-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 AM378_00510 1914503ffa5c1fb7843740f0b7d983b9 468 PRINTS PR00171 Sugar transporter signature 267 277 2.0E-23 T 15-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 AM378_00510 1914503ffa5c1fb7843740f0b7d983b9 468 ProSitePatterns PS00216 Sugar transport proteins signature 1. 312 328 - T 15-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AM378_00510 1914503ffa5c1fb7843740f0b7d983b9 468 ProSitePatterns PS00217 Sugar transport proteins signature 2. 119 144 - T 15-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AM378_00510 1914503ffa5c1fb7843740f0b7d983b9 468 SUPERFAMILY SSF103473 15 453 1.16E-77 T 15-10-2018 IPR036259 MFS transporter superfamily AM378_00510 1914503ffa5c1fb7843740f0b7d983b9 468 Gene3D G3DSA:1.20.1250.20 16 457 5.7E-132 T 15-10-2018 AM378_00510 1914503ffa5c1fb7843740f0b7d983b9 468 Pfam PF00083 Sugar (and other) transporter 23 455 2.0E-138 T 15-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 AM378_06080 19f535fd8042142e492f27fe9bdef662 539 SUPERFAMILY SSF55604 453 523 4.71E-20 T 15-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 AM378_06080 19f535fd8042142e492f27fe9bdef662 539 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 463 480 - T 15-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 AM378_06080 19f535fd8042142e492f27fe9bdef662 539 TIGRFAM TIGR02004 PTS-IIBC-malX: PTS system, maltose and glucose-specific IIBC component 8 523 1.5E-255 T 15-10-2018 IPR011301 PTS system, maltose/glucose-specific IIBC component GO:0008982|GO:0009401 KEGG: 00500+2.7.1.208 AM378_06080 19f535fd8042142e492f27fe9bdef662 539 Gene3D G3DSA:3.30.1360.60 448 527 1.1E-25 T 15-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 AM378_06080 19f535fd8042142e492f27fe9bdef662 539 Pfam PF02378 Phosphotransferase system, EIIC 19 361 2.4E-83 T 15-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 AM378_06080 19f535fd8042142e492f27fe9bdef662 539 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 421 510 5.5E-23 T 15-10-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 AM378_06080 19f535fd8042142e492f27fe9bdef662 539 Pfam PF00367 phosphotransferase system, EIIB 454 485 6.6E-15 T 15-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 AM378_15545 272755bfaf7c34e4f6298293355e6d90 548 Gene3D G3DSA:3.20.130.10 348 537 3.9E-58 T 15-10-2018 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily GO:0016836 AM378_15545 272755bfaf7c34e4f6298293355e6d90 548 PIRSF PIRSF001394 30 548 1.5E-231 T 15-10-2018 IPR011167 Iron-dependent fumarate hydratase GO:0004333|GO:0006091 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384 AM378_15545 272755bfaf7c34e4f6298293355e6d90 548 Pfam PF05681 Fumarate hydratase (Fumerase) 51 325 3.1E-84 T 15-10-2018 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 AM378_15545 272755bfaf7c34e4f6298293355e6d90 548 ProSitePatterns PS00163 Fumarate lyases signature. 456 465 - T 15-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 AM378_15545 272755bfaf7c34e4f6298293355e6d90 548 SUPERFAMILY SSF117457 361 536 2.22E-62 T 15-10-2018 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily GO:0016836 AM378_15545 272755bfaf7c34e4f6298293355e6d90 548 Pfam PF05683 Fumarase C-terminus 332 537 1.8E-93 T 15-10-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 AM378_15545 272755bfaf7c34e4f6298293355e6d90 548 TIGRFAM TIGR00723 ttdB_fumA_fumB: hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type 372 537 1.8E-62 T 15-10-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 AM378_03880 a5dfe9a9f37664093e383c522241b0f7 199 SUPERFAMILY SSF52218 1 198 1.83E-61 T 15-10-2018 IPR029039 Flavoprotein-like superfamily AM378_03880 a5dfe9a9f37664093e383c522241b0f7 199 Gene3D G3DSA:3.40.50.360 2 199 3.6E-78 T 15-10-2018 IPR029039 Flavoprotein-like superfamily AM378_03880 a5dfe9a9f37664093e383c522241b0f7 199 TIGRFAM TIGR01755 flav_wrbA: NAD(P)H:quinone oxidoreductase, type IV 2 197 8.8E-98 T 15-10-2018 IPR010089 Flavoprotein WrbA-like GO:0003955|GO:0010181 KEGG: 00130+1.6.5.2|MetaCyc: PWY-7731 AM378_03880 a5dfe9a9f37664093e383c522241b0f7 199 Hamap MF_01017 NAD(P)H dehydrogenase (quinone). 1 199 45.46 T 15-10-2018 IPR037513 NAD(P)H dehydrogenase (quinone), prokaryotic GO:0003955|GO:0010181 KEGG: 00130+1.6.5.2|MetaCyc: PWY-7731 AM378_03880 a5dfe9a9f37664093e383c522241b0f7 199 Pfam PF03358 NADPH-dependent FMN reductase 13 142 7.4E-13 T 15-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 AM378_01565 97c5901f38cb39630b054e72d9cd4549 283 SUPERFAMILY SSF103481 42 140 2.35E-7 T 15-10-2018 AM378_01565 97c5901f38cb39630b054e72d9cd4549 283 SUPERFAMILY SSF103481 190 282 4.45E-12 T 15-10-2018 AM378_01565 97c5901f38cb39630b054e72d9cd4549 283 Pfam PF00892 EamA-like transporter family 12 137 2.0E-8 T 15-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AM378_01565 97c5901f38cb39630b054e72d9cd4549 283 Pfam PF00892 EamA-like transporter family 149 280 1.7E-11 T 15-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AM378_17895 eb040f05bb7ba1fb4301e75f9d575198 159 Hamap MF_00265 tRNA(fMet)-specific endonuclease VapC [vapC]. 2 135 11.157 T 15-10-2018 IPR022907 VapC family GO:0004540 AM378_17895 eb040f05bb7ba1fb4301e75f9d575198 159 Pfam PF01850 PIN domain 2 124 1.9E-18 T 15-10-2018 IPR002716 PIN domain AM378_17895 eb040f05bb7ba1fb4301e75f9d575198 159 Gene3D G3DSA:3.40.50.1010 1 139 4.9E-40 T 15-10-2018 AM378_17895 eb040f05bb7ba1fb4301e75f9d575198 159 SUPERFAMILY SSF88723 1 137 1.63E-29 T 15-10-2018 IPR029060 PIN-like domain superfamily AM378_22410 6824a08cf1d0cb1bcc9d7135c8b43885 415 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 247 406 5.3E-43 T 15-10-2018 IPR000160 GGDEF domain AM378_22410 6824a08cf1d0cb1bcc9d7135c8b43885 415 Pfam PF17152 Periplasmic sensor domain 47 147 8.8E-34 T 15-10-2018 IPR033417 Periplasmic sensor domain CHASE8 AM378_22410 6824a08cf1d0cb1bcc9d7135c8b43885 415 SMART SM00267 240 414 2.1E-61 T 15-10-2018 IPR000160 GGDEF domain AM378_22410 6824a08cf1d0cb1bcc9d7135c8b43885 415 Gene3D G3DSA:3.30.70.270 235 410 1.1E-52 T 15-10-2018 AM378_22410 6824a08cf1d0cb1bcc9d7135c8b43885 415 Pfam PF00990 Diguanylate cyclase, GGDEF domain 251 404 1.1E-45 T 15-10-2018 IPR000160 GGDEF domain AM378_22410 6824a08cf1d0cb1bcc9d7135c8b43885 415 SUPERFAMILY SSF55073 256 410 1.57E-44 T 15-10-2018 IPR029787 Nucleotide cyclase AM378_09135 ddaf8d36e2311bbc7c74057a8f97c2a2 619 Gene3D G3DSA:3.20.20.80 388 548 5.3E-10 T 15-10-2018 AM378_09135 ddaf8d36e2311bbc7c74057a8f97c2a2 619 Gene3D G3DSA:2.60.120.260 24 168 2.0E-27 T 15-10-2018 IPR008979 Galactose-binding-like domain superfamily AM378_09135 ddaf8d36e2311bbc7c74057a8f97c2a2 619 SUPERFAMILY SSF51445 271 450 5.99E-10 T 15-10-2018 IPR017853 Glycoside hydrolase superfamily AM378_09135 ddaf8d36e2311bbc7c74057a8f97c2a2 619 SUPERFAMILY SSF49785 24 164 3.19E-7 T 15-10-2018 IPR008979 Galactose-binding-like domain superfamily AM378_01905 04322558f33919c714f781ff12d000f6 526 Pfam PF13646 HEAT repeats 169 223 1.9E-6 T 15-10-2018 AM378_01905 04322558f33919c714f781ff12d000f6 526 Gene3D G3DSA:1.25.10.10 103 230 3.4E-8 T 15-10-2018 IPR011989 Armadillo-like helical AM378_01905 04322558f33919c714f781ff12d000f6 526 Pfam PF02653 Branched-chain amino acid transport system / permease component 234 509 4.7E-51 T 15-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 AM378_01905 04322558f33919c714f781ff12d000f6 526 SUPERFAMILY SSF48371 116 221 2.39E-10 T 15-10-2018 IPR016024 Armadillo-type fold AM378_01905 04322558f33919c714f781ff12d000f6 526 TIGRFAM TIGR03409 urea_trans_UrtB: urea ABC transporter, permease protein UrtB 232 523 7.0E-130 T 15-10-2018 IPR017779 ABC transporter, urea permease protein UrtB, bacterial-type AM378_17750 8712b9c0adbb6e48f6e327a50fc789cc 112 Gene3D G3DSA:1.20.58.280 6 106 3.3E-31 T 15-10-2018 AM378_17750 8712b9c0adbb6e48f6e327a50fc789cc 112 SUPERFAMILY SSF46973 7 104 1.28E-31 T 15-10-2018 IPR036542 Phosphotransferase system, lactose/cellobiose-type IIA subunit superfamily GO:0009401 AM378_17750 8712b9c0adbb6e48f6e327a50fc789cc 112 Pfam PF02255 PTS system, Lactose/Cellobiose specific IIA subunit 11 103 4.4E-30 T 15-10-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 AM378_17750 8712b9c0adbb6e48f6e327a50fc789cc 112 PIRSF PIRSF000699 1 110 8.4E-31 T 15-10-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 AM378_20625 48b216b10b7b0bc4f3ff21a09c705e2f 121 Gene3D G3DSA:3.30.1390.10 51 121 2.0E-32 T 15-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like AM378_20625 48b216b10b7b0bc4f3ff21a09c705e2f 121 SUPERFAMILY SSF48300 3 57 2.22E-16 T 15-10-2018 IPR036235 Ribosomal protein L7/L12, oligomerisation domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM378_20625 48b216b10b7b0bc4f3ff21a09c705e2f 121 Pfam PF00542 Ribosomal protein L7/L12 C-terminal domain 55 121 3.8E-31 T 15-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM378_20625 48b216b10b7b0bc4f3ff21a09c705e2f 121 TIGRFAM TIGR00855 L12: ribosomal protein bL12 1 121 3.5E-48 T 15-10-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM378_20625 48b216b10b7b0bc4f3ff21a09c705e2f 121 Hamap MF_00368 50S ribosomal protein L7/L12 [rplL]. 2 121 25.559 T 15-10-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM378_20625 48b216b10b7b0bc4f3ff21a09c705e2f 121 ProDom PD001326 RIBOSOMAL L7/L12 50S RIBONUCLEOPROTEIN CHLOROPLAST L12 PLASTID DIRECT SEQUENCING PEPTIDE 56 121 1.0E-27 T 15-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM378_20625 48b216b10b7b0bc4f3ff21a09c705e2f 121 SUPERFAMILY SSF54736 50 121 3.84E-25 T 15-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like AM378_20625 48b216b10b7b0bc4f3ff21a09c705e2f 121 Gene3D G3DSA:1.20.5.710 2 50 3.2E-27 T 15-10-2018 AM378_20625 48b216b10b7b0bc4f3ff21a09c705e2f 121 Pfam PF16320 Ribosomal protein L7/L12 dimerisation domain 4 50 2.8E-17 T 15-10-2018 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM378_15445 c2fe6a2f32b2d4aef093a00b55cfc8bb 307 SUPERFAMILY SSF52540 2 232 4.13E-63 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_15445 c2fe6a2f32b2d4aef093a00b55cfc8bb 307 Gene3D G3DSA:3.40.50.300 1 237 3.8E-65 T 15-10-2018 AM378_15445 c2fe6a2f32b2d4aef093a00b55cfc8bb 307 SMART SM00382 30 213 1.0E-12 T 15-10-2018 IPR003593 AAA+ ATPase domain AM378_15445 c2fe6a2f32b2d4aef093a00b55cfc8bb 307 Pfam PF00005 ABC transporter 21 165 3.0E-32 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM378_15445 c2fe6a2f32b2d4aef093a00b55cfc8bb 307 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM378_03720 69d6ff20f60a0a4e8b11025c19c34de7 218 Gene3D G3DSA:3.30.1460.30 6 108 1.2E-31 T 15-10-2018 AM378_03720 69d6ff20f60a0a4e8b11025c19c34de7 218 PIRSF PIRSF028788 1 207 2.9E-54 T 15-10-2018 IPR026256 Transcriptional regulator, TfoX/Sxy-type AM378_03720 69d6ff20f60a0a4e8b11025c19c34de7 218 Gene3D G3DSA:1.10.150.20 116 207 8.0E-19 T 15-10-2018 AM378_03720 69d6ff20f60a0a4e8b11025c19c34de7 218 Pfam PF04994 TfoX C-terminal domain 118 196 1.1E-23 T 15-10-2018 IPR007077 TfoX, C-terminal AM378_03720 69d6ff20f60a0a4e8b11025c19c34de7 218 SUPERFAMILY SSF159894 11 107 1.44E-28 T 15-10-2018 AM378_03720 69d6ff20f60a0a4e8b11025c19c34de7 218 Pfam PF04993 TfoX N-terminal domain 15 106 9.5E-28 T 15-10-2018 IPR007076 TfoX, N-terminal AM378_17045 f71a9ed7bab69f242e6ec7d55e67a576 397 SUPERFAMILY SSF53383 1 395 5.18E-118 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM378_17045 f71a9ed7bab69f242e6ec7d55e67a576 397 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 244 257 - T 15-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 AM378_17045 f71a9ed7bab69f242e6ec7d55e67a576 397 PRINTS PR00799 Aspartate aminotransferase signature 274 299 2.7E-35 T 15-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 AM378_17045 f71a9ed7bab69f242e6ec7d55e67a576 397 PRINTS PR00799 Aspartate aminotransferase signature 207 219 2.7E-35 T 15-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 AM378_17045 f71a9ed7bab69f242e6ec7d55e67a576 397 PRINTS PR00799 Aspartate aminotransferase signature 342 360 2.7E-35 T 15-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 AM378_17045 f71a9ed7bab69f242e6ec7d55e67a576 397 PRINTS PR00799 Aspartate aminotransferase signature 176 195 2.7E-35 T 15-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 AM378_17045 f71a9ed7bab69f242e6ec7d55e67a576 397 Gene3D G3DSA:3.40.640.10 60 301 6.3E-154 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AM378_17045 f71a9ed7bab69f242e6ec7d55e67a576 397 Pfam PF00155 Aminotransferase class I and II 27 393 1.7E-83 T 15-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AM378_17045 f71a9ed7bab69f242e6ec7d55e67a576 397 Gene3D G3DSA:3.90.1150.10 11 392 6.3E-154 T 15-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AM378_19625 add6e9e39c21f1982c0db358d83178f7 642 Pfam PF00672 HAMP domain 308 354 1.1E-8 T 15-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AM378_19625 add6e9e39c21f1982c0db358d83178f7 642 Pfam PF16591 Helical bimodular sensor domain 47 278 4.2E-15 T 15-10-2018 IPR032255 Helical bimodular sensor domain AM378_19625 add6e9e39c21f1982c0db358d83178f7 642 SMART SM00283 359 606 1.9E-91 T 15-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AM378_19625 add6e9e39c21f1982c0db358d83178f7 642 SMART SM00304 306 358 1.1E-6 T 15-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AM378_19625 add6e9e39c21f1982c0db358d83178f7 642 SMART SM01358 39 284 1.1E-39 T 15-10-2018 IPR032255 Helical bimodular sensor domain AM378_19625 add6e9e39c21f1982c0db358d83178f7 642 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 418 573 1.6E-54 T 15-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AM378_19625 add6e9e39c21f1982c0db358d83178f7 642 SUPERFAMILY SSF58104 326 607 9.94E-74 T 15-10-2018 AM378_19625 add6e9e39c21f1982c0db358d83178f7 642 ProSitePatterns PS00538 Bacterial chemotaxis sensory transducers signature. 384 406 - T 15-10-2018 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site AM378_19625 add6e9e39c21f1982c0db358d83178f7 642 Gene3D G3DSA:1.20.1440.210 143 240 3.9E-5 T 15-10-2018 AM378_19625 add6e9e39c21f1982c0db358d83178f7 642 Gene3D G3DSA:1.10.287.950 306 608 2.4E-93 T 15-10-2018 AM378_00230 d3dfde9baf4b5a14513e7ff4d77bd334 117 Pfam PF02635 DsrE/DsrF-like family 4 117 1.4E-20 T 15-10-2018 IPR003787 Sulphur relay, DsrE/F-like protein AM378_00230 d3dfde9baf4b5a14513e7ff4d77bd334 117 Gene3D G3DSA:3.40.1260.10 2 117 1.5E-31 T 15-10-2018 IPR027396 DsrEFH-like AM378_00230 d3dfde9baf4b5a14513e7ff4d77bd334 117 SUPERFAMILY SSF75169 1 117 5.36E-32 T 15-10-2018 IPR027396 DsrEFH-like AM378_01885 5e6e071544529d4682364826fb0bffac 609 Gene3D G3DSA:1.20.58.1700 304 377 6.9E-155 T 15-10-2018 AM378_01885 5e6e071544529d4682364826fb0bffac 609 SUPERFAMILY SSF75304 42 456 3.66E-107 T 15-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 AM378_01885 5e6e071544529d4682364826fb0bffac 609 TIGRFAM TIGR02713 allophanate_hyd: allophanate hydrolase 47 604 4.8E-245 T 15-10-2018 IPR014085 Allophanate hydrolase KEGG: 00220+3.5.1.54|KEGG: 00791+3.5.1.54|MetaCyc: PWY-5169|MetaCyc: PWY-5703 AM378_01885 5e6e071544529d4682364826fb0bffac 609 Pfam PF01425 Amidase 45 447 1.9E-87 T 15-10-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 AM378_01885 5e6e071544529d4682364826fb0bffac 609 Gene3D G3DSA:3.10.490.10 478 608 9.1E-51 T 15-10-2018 AM378_01885 5e6e071544529d4682364826fb0bffac 609 Gene3D G3DSA:3.90.1300.10 46 450 6.9E-155 T 15-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 AM378_15330 74297b9670fcbda7b89bb157828d7971 384 SUPERFAMILY SSF55973 3 109 1.49E-47 T 15-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 AM378_15330 74297b9670fcbda7b89bb157828d7971 384 Pfam PF00438 S-adenosylmethionine synthetase, N-terminal domain 4 101 4.2E-43 T 15-10-2018 IPR022628 S-adenosylmethionine synthetase, N-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 AM378_15330 74297b9670fcbda7b89bb157828d7971 384 Pfam PF02772 S-adenosylmethionine synthetase, central domain 114 231 2.4E-45 T 15-10-2018 IPR022629 S-adenosylmethionine synthetase, central domain GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 AM378_15330 74297b9670fcbda7b89bb157828d7971 384 Pfam PF02773 S-adenosylmethionine synthetase, C-terminal domain 233 369 2.1E-69 T 15-10-2018 IPR022630 S-adenosylmethionine synthetase, C-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 AM378_15330 74297b9670fcbda7b89bb157828d7971 384 SUPERFAMILY SSF55973 233 382 6.67E-71 T 15-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 AM378_15330 74297b9670fcbda7b89bb157828d7971 384 Gene3D G3DSA:3.30.300.10 103 372 3.2E-180 T 15-10-2018 AM378_15330 74297b9670fcbda7b89bb157828d7971 384 SUPERFAMILY SSF55973 112 232 5.49E-52 T 15-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 AM378_15330 74297b9670fcbda7b89bb157828d7971 384 Gene3D G3DSA:3.30.300.10 5 233 3.2E-180 T 15-10-2018 AM378_15330 74297b9670fcbda7b89bb157828d7971 384 Hamap MF_00086 S-adenosylmethionine synthase [metK]. 2 381 59.549 T 15-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 AM378_15330 74297b9670fcbda7b89bb157828d7971 384 TIGRFAM TIGR01034 metK: methionine adenosyltransferase 5 380 3.1E-199 T 15-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 AM378_15330 74297b9670fcbda7b89bb157828d7971 384 Gene3D G3DSA:3.30.300.10 11 270 3.2E-180 T 15-10-2018 AM378_15330 74297b9670fcbda7b89bb157828d7971 384 ProSitePatterns PS00377 S-adenosylmethionine synthase signature 2. 259 267 - T 15-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 AM378_15330 74297b9670fcbda7b89bb157828d7971 384 ProSitePatterns PS00376 S-adenosylmethionine synthase signature 1. 116 126 - T 15-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 AM378_15330 74297b9670fcbda7b89bb157828d7971 384 PIRSF PIRSF000497 1 381 4.3E-174 T 15-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 AM378_22405 69227ecfd299d97ff73e02760eb5a54b 165 SUPERFAMILY SSF103088 49 164 2.22E-32 T 15-10-2018 IPR036737 OmpA-like domain superfamily AM378_22405 69227ecfd299d97ff73e02760eb5a54b 165 Pfam PF00691 OmpA family 63 157 3.4E-18 T 15-10-2018 IPR006665 OmpA-like domain AM378_22405 69227ecfd299d97ff73e02760eb5a54b 165 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 126 145 9.2E-9 T 15-10-2018 AM378_22405 69227ecfd299d97ff73e02760eb5a54b 165 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 108 125 9.2E-9 T 15-10-2018 AM378_22405 69227ecfd299d97ff73e02760eb5a54b 165 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 146 165 9.2E-9 T 15-10-2018 AM378_22405 69227ecfd299d97ff73e02760eb5a54b 165 PRINTS PR01021 OMPA domain signature 63 85 4.2E-10 T 15-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AM378_22405 69227ecfd299d97ff73e02760eb5a54b 165 PRINTS PR01021 OMPA domain signature 108 124 4.2E-10 T 15-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AM378_22405 69227ecfd299d97ff73e02760eb5a54b 165 PRINTS PR01021 OMPA domain signature 93 108 4.2E-10 T 15-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AM378_22405 69227ecfd299d97ff73e02760eb5a54b 165 Gene3D G3DSA:3.30.1330.60 29 164 7.5E-42 T 15-10-2018 IPR036737 OmpA-like domain superfamily AM378_17950 d37be82822dd97e2ca1d07fb2647b0bd 256 Pfam PF00561 alpha/beta hydrolase fold 16 242 1.3E-24 T 15-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AM378_17950 d37be82822dd97e2ca1d07fb2647b0bd 256 TIGRFAM TIGR01738 bioH: pimelyl-[acyl-carrier protein] methyl ester esterase 10 253 6.1E-102 T 15-10-2018 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase GO:0009102|GO:0052689 KEGG: 00780+3.1.1.85|MetaCyc: PWY-6519 AM378_17950 d37be82822dd97e2ca1d07fb2647b0bd 256 Gene3D G3DSA:3.40.50.1820 1 255 4.9E-71 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold AM378_17950 d37be82822dd97e2ca1d07fb2647b0bd 256 SUPERFAMILY SSF53474 4 255 8.18E-47 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold AM378_17950 d37be82822dd97e2ca1d07fb2647b0bd 256 Hamap MF_01260 Pimeloyl-[acyl-carrier protein] methyl ester esterase [bioH]. 4 254 47.467 T 15-10-2018 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase GO:0009102|GO:0052689 KEGG: 00780+3.1.1.85|MetaCyc: PWY-6519 AM378_19720 f48edd37f929a1983466b5226801f2f6 462 SUPERFAMILY SSF51338 83 125 2.41E-7 T 15-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 AM378_19720 f48edd37f929a1983466b5226801f2f6 462 Pfam PF07969 Amidohydrolase family 164 455 7.3E-10 T 15-10-2018 IPR013108 Amidohydrolase 3 AM378_19720 f48edd37f929a1983466b5226801f2f6 462 Gene3D G3DSA:2.30.40.10 79 455 9.4E-96 T 15-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 AM378_19720 f48edd37f929a1983466b5226801f2f6 462 Gene3D G3DSA:3.20.20.140 118 415 9.4E-96 T 15-10-2018 AM378_19720 f48edd37f929a1983466b5226801f2f6 462 SUPERFAMILY SSF51556 118 425 2.14E-71 T 15-10-2018 IPR032466 Metal-dependent hydrolase AM378_14710 54370eb600ffae43b93a6e00ad553220 449 Pfam PF02321 Outer membrane efflux protein 262 438 7.2E-19 T 15-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 AM378_14710 54370eb600ffae43b93a6e00ad553220 449 Pfam PF02321 Outer membrane efflux protein 59 233 4.4E-19 T 15-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 AM378_14710 54370eb600ffae43b93a6e00ad553220 449 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 21 439 1.2E-66 T 15-10-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0016020|GO:0022857|GO:0055085 AM378_14710 54370eb600ffae43b93a6e00ad553220 449 SUPERFAMILY SSF56954 40 439 9.16E-76 T 15-10-2018 AM378_14710 54370eb600ffae43b93a6e00ad553220 449 Gene3D G3DSA:2.20.200.10 86 329 1.0E-91 T 15-10-2018 AM378_14710 54370eb600ffae43b93a6e00ad553220 449 Gene3D G3DSA:1.20.1600.10 40 439 1.0E-91 T 15-10-2018 AM378_13710 9b48e61f7edeb92bc61e375655fe8a81 397 Pfam PF13356 Arm DNA-binding domain 8 94 2.1E-16 T 15-10-2018 IPR025166 Integrase, DNA-binding domain AM378_13710 9b48e61f7edeb92bc61e375655fe8a81 397 Gene3D G3DSA:1.10.443.10 212 387 8.3E-17 T 15-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 AM378_13710 9b48e61f7edeb92bc61e375655fe8a81 397 Gene3D G3DSA:3.30.160.390 6 95 5.8E-24 T 15-10-2018 IPR038488 Integrase, DNA-binding domain superfamily AM378_13710 9b48e61f7edeb92bc61e375655fe8a81 397 Pfam PF00589 Phage integrase family 214 377 5.4E-28 T 15-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AM378_13710 9b48e61f7edeb92bc61e375655fe8a81 397 SUPERFAMILY SSF56349 109 386 9.42E-57 T 15-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AM378_13710 9b48e61f7edeb92bc61e375655fe8a81 397 Gene3D G3DSA:1.10.150.130 96 211 4.3E-29 T 15-10-2018 IPR010998 Integrase/recombinase, N-terminal AM378_05315 16e5ced7f079a2b5f597fb43b7cb1f25 179 Pfam PF05229 Spore Coat Protein U domain 28 176 1.8E-36 T 15-10-2018 IPR007893 Spore coat protein U AM378_05315 16e5ced7f079a2b5f597fb43b7cb1f25 179 SMART SM00972 119 176 2.1E-22 T 15-10-2018 IPR007893 Spore coat protein U AM378_10020 460745534762ebe12067c21215f007b6 481 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 29 52 - T 15-10-2018 IPR017441 Protein kinase, ATP binding site GO:0005524 AM378_10020 460745534762ebe12067c21215f007b6 481 Gene3D G3DSA:1.10.510.10 124 294 1.7E-47 T 15-10-2018 AM378_10020 460745534762ebe12067c21215f007b6 481 SUPERFAMILY SSF56112 17 302 1.84E-47 T 15-10-2018 IPR011009 Protein kinase-like domain superfamily AM378_10020 460745534762ebe12067c21215f007b6 481 Gene3D G3DSA:3.30.200.20 14 123 1.7E-47 T 15-10-2018 AM378_10020 460745534762ebe12067c21215f007b6 481 Pfam PF00069 Protein kinase domain 23 286 4.8E-26 T 15-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 AM378_15860 4ff76209773e8c4ba27cf32ef623011a 387 Pfam PF00465 Iron-containing alcohol dehydrogenase 9 363 2.4E-88 T 15-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 AM378_15860 4ff76209773e8c4ba27cf32ef623011a 387 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 264 284 - T 15-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 AM378_15860 4ff76209773e8c4ba27cf32ef623011a 387 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 173 201 - T 15-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 AM378_15860 4ff76209773e8c4ba27cf32ef623011a 387 Gene3D G3DSA:1.20.1090.10 185 387 5.7E-46 T 15-10-2018 AM378_15860 4ff76209773e8c4ba27cf32ef623011a 387 SUPERFAMILY SSF56796 1 385 2.09E-104 T 15-10-2018 AM378_15860 4ff76209773e8c4ba27cf32ef623011a 387 Gene3D G3DSA:3.40.50.1970 1 184 1.8E-47 T 15-10-2018 AM378_13590 3637d1fb2dceee5bca636ddb8601715d 302 SUPERFAMILY SSF54814 182 297 9.81E-42 T 15-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 AM378_13590 3637d1fb2dceee5bca636ddb8601715d 302 Pfam PF01926 50S ribosome-binding GTPase 11 125 2.3E-22 T 15-10-2018 IPR006073 GTP binding domain GO:0005525 AM378_13590 3637d1fb2dceee5bca636ddb8601715d 302 TIGRFAM TIGR00436 era: GTP-binding protein Era 9 280 5.0E-117 T 15-10-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM378_13590 3637d1fb2dceee5bca636ddb8601715d 302 Hamap MF_00367 GTPase Era [era]. 6 297 35.799 T 15-10-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM378_13590 3637d1fb2dceee5bca636ddb8601715d 302 Gene3D G3DSA:3.40.50.300 2 184 4.8E-50 T 15-10-2018 AM378_13590 3637d1fb2dceee5bca636ddb8601715d 302 Pfam PF07650 KH domain 209 285 3.5E-19 T 15-10-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM378_13590 3637d1fb2dceee5bca636ddb8601715d 302 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 8 171 3.4E-40 T 15-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 AM378_13590 3637d1fb2dceee5bca636ddb8601715d 302 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 79 97 9.5E-6 T 15-10-2018 IPR006073 GTP binding domain GO:0005525 AM378_13590 3637d1fb2dceee5bca636ddb8601715d 302 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 11 31 9.5E-6 T 15-10-2018 IPR006073 GTP binding domain GO:0005525 AM378_13590 3637d1fb2dceee5bca636ddb8601715d 302 Gene3D G3DSA:3.30.300.20 186 302 4.1E-43 T 15-10-2018 IPR015946 K homology domain-like, alpha/beta AM378_13590 3637d1fb2dceee5bca636ddb8601715d 302 SUPERFAMILY SSF52540 11 205 1.5E-43 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_03640 d735423dd1b48a97a3c4d0b468933b7c 336 ProSitePatterns PS00911 Dihydroorotate dehydrogenase signature 1. 80 99 - T 15-10-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 AM378_03640 d735423dd1b48a97a3c4d0b468933b7c 336 Gene3D G3DSA:3.20.20.70 1 336 4.3E-145 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM378_03640 d735423dd1b48a97a3c4d0b468933b7c 336 PIRSF PIRSF000164 12 336 1.9E-97 T 15-10-2018 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 GO:0004152|GO:0006222|GO:0055114 AM378_03640 d735423dd1b48a97a3c4d0b468933b7c 336 SUPERFAMILY SSF51395 1 334 5.5E-105 T 15-10-2018 AM378_03640 d735423dd1b48a97a3c4d0b468933b7c 336 TIGRFAM TIGR01036 pyrD_sub2: dihydroorotate dehydrogenase (fumarate) 3 336 9.9E-160 T 15-10-2018 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 AM378_03640 d735423dd1b48a97a3c4d0b468933b7c 336 Hamap MF_00225 Dihydroorotate dehydrogenase (quinone) [pyrD]. 2 336 51.702 T 15-10-2018 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 AM378_03640 d735423dd1b48a97a3c4d0b468933b7c 336 ProSitePatterns PS00912 Dihydroorotate dehydrogenase signature 2. 292 312 - T 15-10-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 AM378_03640 d735423dd1b48a97a3c4d0b468933b7c 336 Pfam PF01180 Dihydroorotate dehydrogenase 47 335 3.5E-92 T 15-10-2018 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 AM378_00480 d404034efbfe5b96194ddc2a659fa6b2 383 Pfam PF02353 Mycolic acid cyclopropane synthetase 108 368 2.0E-101 T 15-10-2018 AM378_00480 d404034efbfe5b96194ddc2a659fa6b2 383 SUPERFAMILY SSF53335 117 370 1.02E-77 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM378_00480 d404034efbfe5b96194ddc2a659fa6b2 383 Gene3D G3DSA:3.40.50.150 117 376 2.2E-100 T 15-10-2018 AM378_00480 d404034efbfe5b96194ddc2a659fa6b2 383 PIRSF PIRSF003085 4 378 8.5E-126 T 15-10-2018 IPR003333 Mycolic acid cyclopropane synthase GO:0008610 AM378_04685 72e66e382f80eac19319e7c9dca71919 791 Gene3D G3DSA:3.30.1390.40 489 520 2.1E-255 T 15-10-2018 AM378_04685 72e66e382f80eac19319e7c9dca71919 791 Gene3D G3DSA:1.50.10.10 310 788 2.1E-255 T 15-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 AM378_04685 72e66e382f80eac19319e7c9dca71919 791 Gene3D G3DSA:1.10.287.100 265 303 1.4E-15 T 15-10-2018 AM378_04685 72e66e382f80eac19319e7c9dca71919 791 SUPERFAMILY SSF48208 293 787 2.65E-82 T 15-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 AM378_04685 72e66e382f80eac19319e7c9dca71919 791 Pfam PF01204 Trehalase 583 770 4.8E-7 T 15-10-2018 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 AM378_04685 72e66e382f80eac19319e7c9dca71919 791 Gene3D G3DSA:2.70.98.50 33 264 4.8E-83 T 15-10-2018 AM378_16875 7a198d078f824f10ae2508ad534a76d9 644 Gene3D G3DSA:3.20.20.450 396 640 8.1E-37 T 15-10-2018 IPR035919 EAL domain superfamily AM378_16875 7a198d078f824f10ae2508ad534a76d9 644 Pfam PF17157 Gammaproteobacterial periplasmic sensor domain 34 130 5.5E-27 T 15-10-2018 IPR033423 Gammaproteobacterial periplasmic sensor domain GAPES4 AM378_16875 7a198d078f824f10ae2508ad534a76d9 644 SUPERFAMILY SSF55073 231 385 5.81E-20 T 15-10-2018 IPR029787 Nucleotide cyclase AM378_16875 7a198d078f824f10ae2508ad534a76d9 644 Pfam PF00990 Diguanylate cyclase, GGDEF domain 225 378 1.7E-22 T 15-10-2018 IPR000160 GGDEF domain AM378_16875 7a198d078f824f10ae2508ad534a76d9 644 Pfam PF00563 EAL domain 403 628 2.3E-39 T 15-10-2018 IPR001633 EAL domain AM378_16875 7a198d078f824f10ae2508ad534a76d9 644 SUPERFAMILY SSF141868 400 638 1.7E-36 T 15-10-2018 IPR035919 EAL domain superfamily AM378_16875 7a198d078f824f10ae2508ad534a76d9 644 Gene3D G3DSA:3.30.70.270 208 384 3.4E-22 T 15-10-2018 AM378_16875 7a198d078f824f10ae2508ad534a76d9 644 SMART SM00267 214 383 3.3E-19 T 15-10-2018 IPR000160 GGDEF domain AM378_16875 7a198d078f824f10ae2508ad534a76d9 644 SMART SM00052 393 633 1.4E-35 T 15-10-2018 IPR001633 EAL domain AM378_23560 fb4e9dc699cca16abccd2228d085a065 413 PIRSF PIRSF016055 1 413 1.2E-201 T 15-10-2018 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0010181|GO:0016021|GO:0016655|GO:0022904 AM378_23560 fb4e9dc699cca16abccd2228d085a065 413 Hamap MF_00426 Na(+)-translocating NADH-quinone reductase subunit B [nqrB]. 2 412 37.176 T 15-10-2018 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0010181|GO:0016021|GO:0016655|GO:0022904 AM378_23560 fb4e9dc699cca16abccd2228d085a065 413 Pfam PF03116 NQR2, RnfD, RnfE family 41 405 1.5E-110 T 15-10-2018 IPR004338 Ion-translocating oxidoreductase NqrB/RnfD GO:0016020|GO:0055085 AM378_23560 fb4e9dc699cca16abccd2228d085a065 413 TIGRFAM TIGR01937 nqrB: NADH:ubiquinone oxidoreductase, Na(+)-translocating, B subunit 3 408 5.0E-198 T 15-10-2018 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0010181|GO:0016021|GO:0016655|GO:0022904 AM378_17255 d5bc5c8df4f559d69fc5b2e72107664c 1231 TIGRFAM TIGR02082 metH: methionine synthase 18 1196 0.0 T 15-10-2018 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AM378_17255 d5bc5c8df4f559d69fc5b2e72107664c 1231 Gene3D G3DSA:1.10.288.10 940 1096 4.4E-150 T 15-10-2018 AM378_17255 d5bc5c8df4f559d69fc5b2e72107664c 1231 SUPERFAMILY SSF56507 907 1230 3.92E-133 T 15-10-2018 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AM378_17255 d5bc5c8df4f559d69fc5b2e72107664c 1231 Pfam PF02607 B12 binding domain 663 737 2.1E-25 T 15-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AM378_17255 d5bc5c8df4f559d69fc5b2e72107664c 1231 Pfam PF02574 Homocysteine S-methyltransferase 22 330 3.8E-80 T 15-10-2018 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 AM378_17255 d5bc5c8df4f559d69fc5b2e72107664c 1231 Pfam PF00809 Pterin binding enzyme 365 603 1.2E-62 T 15-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AM378_17255 d5bc5c8df4f559d69fc5b2e72107664c 1231 SUPERFAMILY SSF51717 361 635 6.41E-90 T 15-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AM378_17255 d5bc5c8df4f559d69fc5b2e72107664c 1231 Gene3D G3DSA:3.10.196.10 912 1227 4.4E-150 T 15-10-2018 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AM378_17255 d5bc5c8df4f559d69fc5b2e72107664c 1231 SUPERFAMILY SSF52242 747 898 6.15E-47 T 15-10-2018 IPR036724 Cobalamin-binding domain superfamily GO:0031419|GO:0046872 Reactome: R-HSA-196741 AM378_17255 d5bc5c8df4f559d69fc5b2e72107664c 1231 Gene3D G3DSA:3.20.20.330 6 344 2.5E-126 T 15-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 AM378_17255 d5bc5c8df4f559d69fc5b2e72107664c 1231 Gene3D G3DSA:3.20.20.20 345 647 3.5E-131 T 15-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AM378_17255 d5bc5c8df4f559d69fc5b2e72107664c 1231 PIRSF PIRSF000381 6 1199 0.0 T 15-10-2018 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AM378_17255 d5bc5c8df4f559d69fc5b2e72107664c 1231 Pfam PF02310 B12 binding domain 752 844 1.8E-18 T 15-10-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 AM378_17255 d5bc5c8df4f559d69fc5b2e72107664c 1231 Gene3D G3DSA:3.40.50.280 748 899 2.1E-56 T 15-10-2018 AM378_17255 d5bc5c8df4f559d69fc5b2e72107664c 1231 SUPERFAMILY SSF82282 12 404 2.49E-118 T 15-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 AM378_17255 d5bc5c8df4f559d69fc5b2e72107664c 1231 Pfam PF02965 Vitamin B12 dependent methionine synthase, activation domain 942 1212 1.1E-125 T 15-10-2018 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AM378_17255 d5bc5c8df4f559d69fc5b2e72107664c 1231 SMART SM01018 661 744 1.1E-45 T 15-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AM378_17255 d5bc5c8df4f559d69fc5b2e72107664c 1231 SUPERFAMILY SSF47644 657 743 7.72E-29 T 15-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AM378_17255 d5bc5c8df4f559d69fc5b2e72107664c 1231 Gene3D G3DSA:1.10.1240.10 653 741 3.7E-41 T 15-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AM378_15015 9a561eda0dc9d051434c5ffcc99f091b 959 Pfam PF02347 Glycine cleavage system P-protein 16 440 9.6E-183 T 15-10-2018 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 AM378_15015 9a561eda0dc9d051434c5ffcc99f091b 959 Pfam PF02347 Glycine cleavage system P-protein 461 739 2.2E-8 T 15-10-2018 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 AM378_15015 9a561eda0dc9d051434c5ffcc99f091b 959 Gene3D G3DSA:3.40.640.10 96 355 7.3E-98 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AM378_15015 9a561eda0dc9d051434c5ffcc99f091b 959 Gene3D G3DSA:3.40.640.10 525 756 3.1E-60 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AM378_15015 9a561eda0dc9d051434c5ffcc99f091b 959 Hamap MF_00711 Glycine dehydrogenase (decarboxylating) [gcvP]. 8 958 25.475 T 15-10-2018 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 AM378_15015 9a561eda0dc9d051434c5ffcc99f091b 959 TIGRFAM TIGR00461 gcvP: glycine dehydrogenase 17 952 0.0 T 15-10-2018 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 AM378_15015 9a561eda0dc9d051434c5ffcc99f091b 959 Gene3D G3DSA:3.90.1150.10 767 899 5.4E-42 T 15-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AM378_15015 9a561eda0dc9d051434c5ffcc99f091b 959 SUPERFAMILY SSF53383 462 953 2.87E-96 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM378_15015 9a561eda0dc9d051434c5ffcc99f091b 959 SUPERFAMILY SSF53383 17 441 2.46E-97 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM378_03695 926afcd71b847291e9914e6a63399afd 172 SUPERFAMILY SSF54637 4 169 9.12E-56 T 15-10-2018 IPR029069 HotDog domain superfamily AM378_03695 926afcd71b847291e9914e6a63399afd 172 TIGRFAM TIGR01749 fabA: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA 4 171 6.8E-93 T 15-10-2018 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA GO:0005737|GO:0006633|GO:0008693 KEGG: 00061+4.2.1.59+5.3.3.14|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 AM378_03695 926afcd71b847291e9914e6a63399afd 172 Hamap MF_00405 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase [fabA]. 2 172 50.981 T 15-10-2018 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA GO:0005737|GO:0006633|GO:0008693 KEGG: 00061+4.2.1.59+5.3.3.14|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 AM378_03695 926afcd71b847291e9914e6a63399afd 172 Gene3D G3DSA:3.10.129.10 1 172 2.1E-64 T 15-10-2018 AM378_03695 926afcd71b847291e9914e6a63399afd 172 Pfam PF07977 FabA-like domain 29 158 3.2E-53 T 15-10-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 AM378_11485 8ebdd93fa0b55ac57d336b9db55eb8df 75 SUPERFAMILY SSF158651 1 75 7.72E-32 T 15-10-2018 IPR023202 YejL-like superfamily AM378_11485 8ebdd93fa0b55ac57d336b9db55eb8df 75 Gene3D G3DSA:1.10.3390.10 1 75 1.9E-35 T 15-10-2018 IPR023202 YejL-like superfamily AM378_11485 8ebdd93fa0b55ac57d336b9db55eb8df 75 Hamap MF_00816 UPF0352 protein YejL [yejL]. 1 71 23.349 T 15-10-2018 IPR009857 Uncharacterised protein family UPF0352 AM378_11485 8ebdd93fa0b55ac57d336b9db55eb8df 75 ProDom PD027794 UPF0352 YEJL NTHI1007 CPS_2611 VF1649 VV1166 HD1515 VP2129 YPO1261/Y2923/YP0880 ECA2748 1 69 1.0E-31 T 15-10-2018 IPR009857 Uncharacterised protein family UPF0352 AM378_11485 8ebdd93fa0b55ac57d336b9db55eb8df 75 PIRSF PIRSF006188 1 72 1.3E-35 T 15-10-2018 IPR009857 Uncharacterised protein family UPF0352 AM378_11485 8ebdd93fa0b55ac57d336b9db55eb8df 75 Pfam PF07208 Protein of unknown function (DUF1414) 26 69 7.6E-24 T 15-10-2018 IPR009857 Uncharacterised protein family UPF0352 AM378_14510 ef874bbb8756a66f2eabaa3909558ec3 748 Gene3D G3DSA:3.20.20.60 400 741 2.7E-102 T 15-10-2018 AM378_14510 ef874bbb8756a66f2eabaa3909558ec3 748 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 351 362 - T 15-10-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 AM378_14510 ef874bbb8756a66f2eabaa3909558ec3 748 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 419 707 1.3E-101 T 15-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 AM378_14510 ef874bbb8756a66f2eabaa3909558ec3 748 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 175 731 4.5E-128 T 15-10-2018 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 AM378_14510 ef874bbb8756a66f2eabaa3909558ec3 748 Pfam PF01590 GAF domain 18 151 6.5E-15 T 15-10-2018 IPR003018 GAF domain GO:0005515 AM378_14510 ef874bbb8756a66f2eabaa3909558ec3 748 SUPERFAMILY SSF47831 198 309 9.94E-26 T 15-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 AM378_14510 ef874bbb8756a66f2eabaa3909558ec3 748 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 666 678 1.3E-24 T 15-10-2018 AM378_14510 ef874bbb8756a66f2eabaa3909558ec3 748 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 630 645 1.3E-24 T 15-10-2018 AM378_14510 ef874bbb8756a66f2eabaa3909558ec3 748 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 613 628 1.3E-24 T 15-10-2018 AM378_14510 ef874bbb8756a66f2eabaa3909558ec3 748 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 459 478 1.3E-24 T 15-10-2018 AM378_14510 ef874bbb8756a66f2eabaa3909558ec3 748 Gene3D G3DSA:3.30.450.40 1 163 1.9E-45 T 15-10-2018 IPR029016 GAF-like domain superfamily AM378_14510 ef874bbb8756a66f2eabaa3909558ec3 748 SUPERFAMILY SSF52009 293 413 4.97E-24 T 15-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 AM378_14510 ef874bbb8756a66f2eabaa3909558ec3 748 Pfam PF05524 PEP-utilising enzyme, N-terminal 174 294 3.9E-24 T 15-10-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 AM378_14510 ef874bbb8756a66f2eabaa3909558ec3 748 Pfam PF00391 PEP-utilising enzyme, mobile domain 321 391 2.0E-14 T 15-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 AM378_14510 ef874bbb8756a66f2eabaa3909558ec3 748 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 613 631 - T 15-10-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 AM378_14510 ef874bbb8756a66f2eabaa3909558ec3 748 SMART SM00065 17 164 5.4E-26 T 15-10-2018 IPR003018 GAF domain GO:0005515 AM378_14510 ef874bbb8756a66f2eabaa3909558ec3 748 Gene3D G3DSA:1.10.274.10 190 314 4.0E-54 T 15-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 AM378_14510 ef874bbb8756a66f2eabaa3909558ec3 748 SUPERFAMILY SSF51621 420 715 1.15E-95 T 15-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 AM378_14510 ef874bbb8756a66f2eabaa3909558ec3 748 SUPERFAMILY SSF55781 2 159 2.84E-31 T 15-10-2018 AM378_14510 ef874bbb8756a66f2eabaa3909558ec3 748 Gene3D G3DSA:3.50.30.10 175 399 4.0E-54 T 15-10-2018 AM378_21200 fda5d2c28d1d770e9b15578dc6beb101 115 Pfam PF06094 Gamma-glutamyl cyclotransferase, AIG2-like 3 109 2.9E-22 T 15-10-2018 IPR009288 Gamma-glutamylcyclotransferase, AIG2-like AM378_21200 fda5d2c28d1d770e9b15578dc6beb101 115 Gene3D G3DSA:3.10.490.10 1 115 1.4E-41 T 15-10-2018 AM378_21200 fda5d2c28d1d770e9b15578dc6beb101 115 SUPERFAMILY SSF110857 1 114 3.92E-33 T 15-10-2018 IPR036568 Gamma-glutamyl cyclotransferase-like superfamily AM378_01380 5040e1ac8a3b30e231d93f709a2c702a 368 Pfam PF12698 ABC-2 family transporter protein 25 359 1.9E-48 T 15-10-2018 AM378_01380 5040e1ac8a3b30e231d93f709a2c702a 368 PRINTS PR00164 ABC-2 type transport system membrane protein signature 310 329 2.1E-7 T 15-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 AM378_01380 5040e1ac8a3b30e231d93f709a2c702a 368 PRINTS PR00164 ABC-2 type transport system membrane protein signature 253 277 2.1E-7 T 15-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 AM378_01380 5040e1ac8a3b30e231d93f709a2c702a 368 PRINTS PR00164 ABC-2 type transport system membrane protein signature 290 309 2.1E-7 T 15-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 AM378_08195 d4b8e81036f672ba2932c79c5a1e7cad 40 Pfam PF06827 Zinc finger found in FPG and IleRS 10 25 6.7E-5 T 15-10-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 AM378_21470 273a9785d66bdacdc1201038a6648287 146 Hamap MF_00764 UPF0306 protein YhbP [yhbP]. 6 143 33.889 T 15-10-2018 IPR011194 Uncharacterised protein family UPF0306 AM378_21470 273a9785d66bdacdc1201038a6648287 146 Gene3D G3DSA:2.30.110.10 2 141 5.9E-11 T 15-10-2018 IPR012349 FMN-binding split barrel GO:0048037 AM378_21470 273a9785d66bdacdc1201038a6648287 146 SUPERFAMILY SSF50475 4 142 8.09E-19 T 15-10-2018 AM378_21470 273a9785d66bdacdc1201038a6648287 146 PIRSF PIRSF009554 3 145 7.6E-60 T 15-10-2018 IPR011194 Uncharacterised protein family UPF0306 AM378_14155 4ba31745f89c1f1b749608054b1558c8 134 Pfam PF16358 RcsF lipoprotein 26 132 2.1E-55 T 15-10-2018 IPR030852 Outer membrane lipoprotein RcsF GO:0009279|GO:0035556 AM378_14155 4ba31745f89c1f1b749608054b1558c8 134 Gene3D G3DSA:3.30.110.70 29 134 7.8E-37 T 15-10-2018 AM378_14155 4ba31745f89c1f1b749608054b1558c8 134 Hamap MF_00976 Outer membrane lipoprotein RcsF [rcsF]. 1 133 36.802 T 15-10-2018 IPR030852 Outer membrane lipoprotein RcsF GO:0009279|GO:0035556 AM378_01595 6683ea6d7d74fafb1ba566b3e203640c 568 Pfam PF01565 FAD binding domain 43 162 5.0E-9 T 15-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 AM378_01595 6683ea6d7d74fafb1ba566b3e203640c 568 Hamap MF_02092 Quinone-dependent D-lactate dehydrogenase [dld]. 6 564 60.046 T 15-10-2018 IPR012256 D-lactate dehydrogenase GO:0005887|GO:0016901|GO:0019516|GO:0022904|GO:0050660 KEGG: 00620+1.1.5.12|MetaCyc: PWY-5386|MetaCyc: PWY-7425 AM378_01595 6683ea6d7d74fafb1ba566b3e203640c 568 Gene3D G3DSA:3.30.465.10 102 264 1.1E-74 T 15-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 AM378_01595 6683ea6d7d74fafb1ba566b3e203640c 568 SUPERFAMILY SSF56176 6 267 2.07E-72 T 15-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 AM378_01595 6683ea6d7d74fafb1ba566b3e203640c 568 PIRSF PIRSF000101 1 565 7.9E-296 T 15-10-2018 IPR012256 D-lactate dehydrogenase GO:0005887|GO:0016901|GO:0019516|GO:0022904|GO:0050660 KEGG: 00620+1.1.5.12|MetaCyc: PWY-5386|MetaCyc: PWY-7425 AM378_01595 6683ea6d7d74fafb1ba566b3e203640c 568 Pfam PF09330 D-lactate dehydrogenase, membrane binding 274 563 1.5E-150 T 15-10-2018 IPR015409 D-lactate dehydrogenase, membrane binding, C-terminal GO:0050660|GO:0055085 KEGG: 00620+1.1.5.12|MetaCyc: PWY-5386|MetaCyc: PWY-7425 AM378_01595 6683ea6d7d74fafb1ba566b3e203640c 568 Gene3D G3DSA:3.30.43.10 1 99 7.8E-13 T 15-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 AM378_01595 6683ea6d7d74fafb1ba566b3e203640c 568 Gene3D G3DSA:3.30.70.610 355 430 6.1E-19 T 15-10-2018 IPR016172 D-lactate dehydrogenase, C-terminal subdomain 1 GO:0006089|GO:0050660|GO:0055085 KEGG: 00620+1.1.5.12|MetaCyc: PWY-5386|MetaCyc: PWY-7425 AM378_01595 6683ea6d7d74fafb1ba566b3e203640c 568 Gene3D G3DSA:3.30.70.610 265 346 6.7E-20 T 15-10-2018 IPR016172 D-lactate dehydrogenase, C-terminal subdomain 1 GO:0006089|GO:0050660|GO:0055085 KEGG: 00620+1.1.5.12|MetaCyc: PWY-5386|MetaCyc: PWY-7425 AM378_01595 6683ea6d7d74fafb1ba566b3e203640c 568 Gene3D G3DSA:3.30.1370.20 431 515 1.4E-42 T 15-10-2018 IPR016173 D-lactate dehydrogenase, C-terminal subdomain 2 GO:0006089|GO:0050660|GO:0055085 KEGG: 00620+1.1.5.12|MetaCyc: PWY-5386|MetaCyc: PWY-7425 AM378_01595 6683ea6d7d74fafb1ba566b3e203640c 568 SUPERFAMILY SSF55103 272 563 1.66E-118 T 15-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 AM378_05005 7819d61c21f0de4c204bcc49c0e2fbb6 208 ProDom PD037115 UPF0274 YCFC HI0638 METABOLISM UNCHARACTERIZED VV1342 PURINE INVOLVED SO2634 HFLD 9 197 1.0E-81 T 15-10-2018 AM378_05005 7819d61c21f0de4c204bcc49c0e2fbb6 208 Hamap MF_00695 High frequency lysogenization protein HflD [hflD]. 1 206 36.399 T 15-10-2018 IPR007451 High frequency lysogenization protein HflD AM378_05005 7819d61c21f0de4c204bcc49c0e2fbb6 208 Gene3D G3DSA:1.10.3890.10 1 208 3.2E-80 T 15-10-2018 IPR035932 HflD-like superfamily AM378_05005 7819d61c21f0de4c204bcc49c0e2fbb6 208 Pfam PF04356 Protein of unknown function (DUF489) 7 198 4.3E-78 T 15-10-2018 IPR007451 High frequency lysogenization protein HflD AM378_05005 7819d61c21f0de4c204bcc49c0e2fbb6 208 SUPERFAMILY SSF101322 2 207 9.15E-81 T 15-10-2018 IPR035932 HflD-like superfamily AM378_08700 97dab563578d873c7a9bf2019f0c3965 594 Gene3D G3DSA:3.30.930.10 118 578 1.1E-197 T 15-10-2018 AM378_08700 97dab563578d873c7a9bf2019f0c3965 594 Gene3D G3DSA:3.30.1360.30 271 420 1.1E-197 T 15-10-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 AM378_08700 97dab563578d873c7a9bf2019f0c3965 594 SUPERFAMILY SSF50249 1 105 4.0E-33 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold AM378_08700 97dab563578d873c7a9bf2019f0c3965 594 Pfam PF01336 OB-fold nucleic acid binding domain 18 102 3.4E-15 T 15-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 AM378_08700 97dab563578d873c7a9bf2019f0c3965 594 TIGRFAM TIGR00459 aspS_bact: aspartate--tRNA ligase 1 586 9.9E-274 T 15-10-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 AM378_08700 97dab563578d873c7a9bf2019f0c3965 594 Pfam PF02938 GAD domain 307 406 4.1E-31 T 15-10-2018 IPR029351 GAD domain Reactome: R-HSA-379726 AM378_08700 97dab563578d873c7a9bf2019f0c3965 594 SUPERFAMILY SSF55681 108 584 7.47E-106 T 15-10-2018 AM378_08700 97dab563578d873c7a9bf2019f0c3965 594 Gene3D G3DSA:2.40.50.140 1 105 2.1E-34 T 15-10-2018 AM378_08700 97dab563578d873c7a9bf2019f0c3965 594 Hamap MF_00044 Aspartate--tRNA(Asp/Asn) ligase [aspS]. 1 584 33.577 T 15-10-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 AM378_08700 97dab563578d873c7a9bf2019f0c3965 594 Pfam PF00152 tRNA synthetases class II (D, K and N) 117 558 4.4E-107 T 15-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM378_08700 97dab563578d873c7a9bf2019f0c3965 594 PRINTS PR01042 Aspartyl-tRNA synthetase signature 518 532 1.2E-26 T 15-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM378_08700 97dab563578d873c7a9bf2019f0c3965 594 PRINTS PR01042 Aspartyl-tRNA synthetase signature 474 490 1.2E-26 T 15-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM378_08700 97dab563578d873c7a9bf2019f0c3965 594 PRINTS PR01042 Aspartyl-tRNA synthetase signature 190 202 1.2E-26 T 15-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM378_08700 97dab563578d873c7a9bf2019f0c3965 594 PRINTS PR01042 Aspartyl-tRNA synthetase signature 207 220 1.2E-26 T 15-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM378_08700 97dab563578d873c7a9bf2019f0c3965 594 SUPERFAMILY SSF55261 288 419 7.36E-46 T 15-10-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 AM378_08320 fc64ef926a34e943a64d27977f229afd 337 Gene3D G3DSA:3.40.50.2300 2 130 8.5E-33 T 15-10-2018 AM378_08320 fc64ef926a34e943a64d27977f229afd 337 Pfam PF00072 Response regulator receiver domain 10 120 6.7E-26 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM378_08320 fc64ef926a34e943a64d27977f229afd 337 Hamap MF_00958 Regulator of RpoS [rssB]. 1 337 55.805 T 15-10-2018 IPR028616 Regulator of RpoS AM378_08320 fc64ef926a34e943a64d27977f229afd 337 SUPERFAMILY SSF52172 7 133 1.02E-32 T 15-10-2018 IPR011006 CheY-like superfamily AM378_08320 fc64ef926a34e943a64d27977f229afd 337 Gene3D G3DSA:3.60.40.10 144 316 3.7E-10 T 15-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AM378_08320 fc64ef926a34e943a64d27977f229afd 337 SMART SM00448 8 120 5.1E-30 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM378_06415 6bf0e8e9f058dda1027f3de212ee1f07 434 Gene3D G3DSA:1.10.760.10 3 160 5.5E-11 T 15-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM378_06415 6bf0e8e9f058dda1027f3de212ee1f07 434 SUPERFAMILY SSF46626 192 299 3.99E-16 T 15-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM378_06415 6bf0e8e9f058dda1027f3de212ee1f07 434 PIRSF PIRSF000018 22 434 5.1E-135 T 15-10-2018 IPR014353 Membrane-bound alcohol dehydrogenase, cytochrome c subunit GO:0005506|GO:0016020|GO:0016614|GO:0020037 AM378_06415 6bf0e8e9f058dda1027f3de212ee1f07 434 Gene3D G3DSA:1.10.760.10 320 434 6.6E-23 T 15-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM378_06415 6bf0e8e9f058dda1027f3de212ee1f07 434 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 50 146 2.5E-5 T 15-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM378_06415 6bf0e8e9f058dda1027f3de212ee1f07 434 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 333 412 1.1E-8 T 15-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM378_06415 6bf0e8e9f058dda1027f3de212ee1f07 434 SUPERFAMILY SSF46626 32 171 1.31E-26 T 15-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM378_06415 6bf0e8e9f058dda1027f3de212ee1f07 434 SUPERFAMILY SSF46626 334 432 1.25E-16 T 15-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM378_14070 0bc58e2df8342597e530f379eb901abc 512 SUPERFAMILY SSF103473 8 499 1.06E-72 T 15-10-2018 IPR036259 MFS transporter superfamily AM378_14070 0bc58e2df8342597e530f379eb901abc 512 Pfam PF07690 Major Facilitator Superfamily 18 412 8.1E-54 T 15-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM378_14070 0bc58e2df8342597e530f379eb901abc 512 PRINTS PR01036 Tetracycline resistance protein TetB signature 204 222 3.3E-6 T 15-10-2018 AM378_14070 0bc58e2df8342597e530f379eb901abc 512 PRINTS PR01036 Tetracycline resistance protein TetB signature 108 128 3.3E-6 T 15-10-2018 AM378_14070 0bc58e2df8342597e530f379eb901abc 512 PRINTS PR01036 Tetracycline resistance protein TetB signature 403 422 3.3E-6 T 15-10-2018 AM378_14070 0bc58e2df8342597e530f379eb901abc 512 PRINTS PR01036 Tetracycline resistance protein TetB signature 17 41 3.3E-6 T 15-10-2018 AM378_14070 0bc58e2df8342597e530f379eb901abc 512 PRINTS PR01036 Tetracycline resistance protein TetB signature 138 162 3.3E-6 T 15-10-2018 AM378_14070 0bc58e2df8342597e530f379eb901abc 512 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 14 495 1.5E-209 T 15-10-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0016021|GO:0022857|GO:0055085 AM378_14070 0bc58e2df8342597e530f379eb901abc 512 Gene3D G3DSA:1.20.1720.10 14 219 5.4E-47 T 15-10-2018 AM378_18210 962b1c6b6271b8ccb8c5acf85d1be753 179 SUPERFAMILY SSF49401 31 179 5.47E-37 T 15-10-2018 IPR008966 Adhesion domain superfamily AM378_18210 962b1c6b6271b8ccb8c5acf85d1be753 179 Gene3D G3DSA:2.60.40.1090 30 178 5.0E-32 T 15-10-2018 IPR036937 Fimbrial-type adhesion domain superfamily GO:0007155|GO:0009289 AM378_18210 962b1c6b6271b8ccb8c5acf85d1be753 179 Pfam PF00419 Fimbrial protein 36 179 8.7E-14 T 15-10-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM378_00855 b3935eb2ba49bbf9ebb5c5cda0c6d43d 554 Gene3D G3DSA:3.90.800.10 101 209 7.4E-107 T 15-10-2018 AM378_00855 b3935eb2ba49bbf9ebb5c5cda0c6d43d 554 Pfam PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain 340 528 2.1E-63 T 15-10-2018 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 AM378_00855 b3935eb2ba49bbf9ebb5c5cda0c6d43d 554 Gene3D G3DSA:1.10.1160.10 261 339 5.7E-35 T 15-10-2018 IPR020061 Glutamine-tRNA ligase, alpha-bundle domain superfamily GO:0005524 AM378_00855 b3935eb2ba49bbf9ebb5c5cda0c6d43d 554 SUPERFAMILY SSF52374 10 337 6.97E-103 T 15-10-2018 AM378_00855 b3935eb2ba49bbf9ebb5c5cda0c6d43d 554 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 34 45 - T 15-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM378_00855 b3935eb2ba49bbf9ebb5c5cda0c6d43d 554 TIGRFAM TIGR00440 glnS: glutamine--tRNA ligase 28 551 0.0 T 15-10-2018 IPR004514 Glutamine-tRNA synthetase GO:0000166|GO:0004819|GO:0005524|GO:0005737|GO:0006425 KEGG: 00970+6.1.1.18|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 AM378_00855 b3935eb2ba49bbf9ebb5c5cda0c6d43d 554 Gene3D G3DSA:2.40.240.10 463 547 3.2E-35 T 15-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 AM378_00855 b3935eb2ba49bbf9ebb5c5cda0c6d43d 554 PRINTS PR00987 Glutamyl-tRNA synthetase signature 60 73 9.4E-10 T 15-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 AM378_00855 b3935eb2ba49bbf9ebb5c5cda0c6d43d 554 PRINTS PR00987 Glutamyl-tRNA synthetase signature 45 56 9.4E-10 T 15-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 AM378_00855 b3935eb2ba49bbf9ebb5c5cda0c6d43d 554 PRINTS PR00987 Glutamyl-tRNA synthetase signature 31 43 9.4E-10 T 15-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 AM378_00855 b3935eb2ba49bbf9ebb5c5cda0c6d43d 554 PRINTS PR00987 Glutamyl-tRNA synthetase signature 210 220 9.4E-10 T 15-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 AM378_00855 b3935eb2ba49bbf9ebb5c5cda0c6d43d 554 Hamap MF_00126 Glutamine--tRNA ligase [glnS]. 1 549 53.982 T 15-10-2018 IPR022861 Glutamine-tRNA ligase, bacterial GO:0004819 KEGG: 00970+6.1.1.18 AM378_00855 b3935eb2ba49bbf9ebb5c5cda0c6d43d 554 SUPERFAMILY SSF50715 340 547 2.72E-80 T 15-10-2018 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 AM378_00855 b3935eb2ba49bbf9ebb5c5cda0c6d43d 554 Gene3D G3DSA:2.40.240.10 348 462 3.8E-48 T 15-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 AM378_00855 b3935eb2ba49bbf9ebb5c5cda0c6d43d 554 Gene3D G3DSA:3.40.50.620 30 247 7.4E-107 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM378_00855 b3935eb2ba49bbf9ebb5c5cda0c6d43d 554 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 28 337 9.8E-127 T 15-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 AM378_11065 c461f5ac1fc2293d322067e128d5e43b 374 Gene3D G3DSA:3.40.630.30 10 374 9.9E-17 T 15-10-2018 AM378_11065 c461f5ac1fc2293d322067e128d5e43b 374 SUPERFAMILY SSF55729 6 371 2.74E-22 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase AM378_07670 96c5c2edf9b01e84c27bdd3a10c6068b 312 Pfam PF01171 PP-loop family 42 200 2.8E-12 T 15-10-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 AM378_07670 96c5c2edf9b01e84c27bdd3a10c6068b 312 Hamap MF_01850 tRNA-cytidine(32) 2-sulfurtransferase [ttcA]. 10 271 57.36 T 15-10-2018 IPR012089 tRNA-cytidine(32) 2-sulfurtransferase GO:0008033 AM378_07670 96c5c2edf9b01e84c27bdd3a10c6068b 312 PIRSF PIRSF004976 2 270 8.9E-74 T 15-10-2018 IPR035107 tRNA thiolation protein, TtcA/Ctu1 type GO:0008033 Reactome: R-HSA-6782315 AM378_07670 96c5c2edf9b01e84c27bdd3a10c6068b 312 SUPERFAMILY SSF52402 17 236 1.52E-53 T 15-10-2018 AM378_07670 96c5c2edf9b01e84c27bdd3a10c6068b 312 Gene3D G3DSA:3.40.50.620 2 258 1.9E-45 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM378_20300 94923290b9ae36a9b969a5484b7e8590 568 Gene3D G3DSA:3.40.50.300 361 553 2.4E-117 T 15-10-2018 AM378_20300 94923290b9ae36a9b969a5484b7e8590 568 SUPERFAMILY SSF52540 361 564 7.88E-53 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_20300 94923290b9ae36a9b969a5484b7e8590 568 SMART SM00382 363 554 3.2E-9 T 15-10-2018 IPR003593 AAA+ ATPase domain AM378_20300 94923290b9ae36a9b969a5484b7e8590 568 SUPERFAMILY SSF47364 265 344 8.64E-22 T 15-10-2018 IPR036225 SRP/SRP receptor, N-terminal Reactome: R-HSA-1799339 AM378_20300 94923290b9ae36a9b969a5484b7e8590 568 Pfam PF00448 SRP54-type protein, GTPase domain 365 564 6.5E-78 T 15-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 AM378_20300 94923290b9ae36a9b969a5484b7e8590 568 Gene3D G3DSA:1.20.120.140 267 563 2.4E-117 T 15-10-2018 AM378_20300 94923290b9ae36a9b969a5484b7e8590 568 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 538 551 - T 15-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 AM378_20300 94923290b9ae36a9b969a5484b7e8590 568 SMART SM00963 270 350 1.6E-24 T 15-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 AM378_20300 94923290b9ae36a9b969a5484b7e8590 568 TIGRFAM TIGR00064 ftsY: signal recognition particle-docking protein FtsY 293 564 1.8E-114 T 15-10-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 AM378_20300 94923290b9ae36a9b969a5484b7e8590 568 Hamap MF_00920 Signal recognition particle receptor FtsY [ftsY]. 293 565 64.899 T 15-10-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 AM378_20300 94923290b9ae36a9b969a5484b7e8590 568 Pfam PF02881 SRP54-type protein, helical bundle domain 281 346 1.1E-12 T 15-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 AM378_20300 94923290b9ae36a9b969a5484b7e8590 568 SMART SM00962 364 565 1.3E-124 T 15-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 AM378_07255 d77f8b58d67f80b2408edbb594349cd1 300 SUPERFAMILY SSF51569 3 289 1.99E-82 T 15-10-2018 AM378_07255 d77f8b58d67f80b2408edbb594349cd1 300 SMART SM01130 3 291 7.4E-89 T 15-10-2018 IPR002220 DapA-like GO:0016829 AM378_07255 d77f8b58d67f80b2408edbb594349cd1 300 Gene3D G3DSA:3.20.20.70 1 289 1.1E-82 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM378_07255 d77f8b58d67f80b2408edbb594349cd1 300 PRINTS PR00146 Dihydrodipicolinate synthase signature 130 147 1.2E-14 T 15-10-2018 IPR002220 DapA-like GO:0016829 AM378_07255 d77f8b58d67f80b2408edbb594349cd1 300 PRINTS PR00146 Dihydrodipicolinate synthase signature 73 91 1.2E-14 T 15-10-2018 IPR002220 DapA-like GO:0016829 AM378_07255 d77f8b58d67f80b2408edbb594349cd1 300 PRINTS PR00146 Dihydrodipicolinate synthase signature 37 58 1.2E-14 T 15-10-2018 IPR002220 DapA-like GO:0016829 AM378_07255 d77f8b58d67f80b2408edbb594349cd1 300 Pfam PF00701 Dihydrodipicolinate synthetase family 4 287 1.6E-57 T 15-10-2018 IPR002220 DapA-like GO:0016829 AM378_07255 d77f8b58d67f80b2408edbb594349cd1 300 PIRSF PIRSF001365 2 300 1.4E-82 T 15-10-2018 IPR002220 DapA-like GO:0016829 AM378_13130 019b34c8eca2a0a19c1cd64694318584 349 Pfam PF01791 DeoC/LacD family aldolase 69 325 4.1E-73 T 15-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 AM378_13130 019b34c8eca2a0a19c1cd64694318584 349 SMART SM01133 68 325 9.6E-39 T 15-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 AM378_13130 019b34c8eca2a0a19c1cd64694318584 349 Gene3D G3DSA:3.20.20.70 39 349 1.3E-71 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM378_13130 019b34c8eca2a0a19c1cd64694318584 349 SUPERFAMILY SSF51569 56 343 1.34E-64 T 15-10-2018 AM378_00200 4730caf5d0eaae792bb7c54a3ea59741 292 Gene3D G3DSA:3.40.50.1980 180 291 2.4E-39 T 15-10-2018 AM378_00200 4730caf5d0eaae792bb7c54a3ea59741 292 PRINTS PR00690 Adhesin family signature 257 276 1.7E-28 T 15-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 AM378_00200 4730caf5d0eaae792bb7c54a3ea59741 292 PRINTS PR00690 Adhesin family signature 178 199 1.7E-28 T 15-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 AM378_00200 4730caf5d0eaae792bb7c54a3ea59741 292 PRINTS PR00690 Adhesin family signature 54 67 1.7E-28 T 15-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 AM378_00200 4730caf5d0eaae792bb7c54a3ea59741 292 PRINTS PR00690 Adhesin family signature 231 249 1.7E-28 T 15-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 AM378_00200 4730caf5d0eaae792bb7c54a3ea59741 292 PRINTS PR00690 Adhesin family signature 67 84 1.7E-28 T 15-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 AM378_00200 4730caf5d0eaae792bb7c54a3ea59741 292 PRINTS PR00690 Adhesin family signature 23 41 1.7E-28 T 15-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 AM378_00200 4730caf5d0eaae792bb7c54a3ea59741 292 Pfam PF01297 Zinc-uptake complex component A periplasmic 27 287 6.9E-79 T 15-10-2018 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 AM378_00200 4730caf5d0eaae792bb7c54a3ea59741 292 Gene3D G3DSA:3.40.50.1980 23 179 2.2E-47 T 15-10-2018 AM378_00200 4730caf5d0eaae792bb7c54a3ea59741 292 PRINTS PR00691 Adhesin B signature 178 195 6.8E-24 T 15-10-2018 IPR006129 Adhesin B GO:0007155 AM378_00200 4730caf5d0eaae792bb7c54a3ea59741 292 PRINTS PR00691 Adhesin B signature 270 288 6.8E-24 T 15-10-2018 IPR006129 Adhesin B GO:0007155 AM378_00200 4730caf5d0eaae792bb7c54a3ea59741 292 PRINTS PR00691 Adhesin B signature 227 244 6.8E-24 T 15-10-2018 IPR006129 Adhesin B GO:0007155 AM378_00200 4730caf5d0eaae792bb7c54a3ea59741 292 PRINTS PR00691 Adhesin B signature 48 66 6.8E-24 T 15-10-2018 IPR006129 Adhesin B GO:0007155 AM378_00200 4730caf5d0eaae792bb7c54a3ea59741 292 PRINTS PR00691 Adhesin B signature 67 86 6.8E-24 T 15-10-2018 IPR006129 Adhesin B GO:0007155 AM378_00200 4730caf5d0eaae792bb7c54a3ea59741 292 PRINTS PR00691 Adhesin B signature 23 44 6.8E-24 T 15-10-2018 IPR006129 Adhesin B GO:0007155 AM378_00200 4730caf5d0eaae792bb7c54a3ea59741 292 SUPERFAMILY SSF53807 20 291 5.4E-84 T 15-10-2018 AM378_17265 7849b4fdcb38afe2c44f4c1cccff9e62 179 Gene3D G3DSA:3.40.50.300 1 171 1.6E-58 T 15-10-2018 AM378_17265 7849b4fdcb38afe2c44f4c1cccff9e62 179 Pfam PF01202 Shikimate kinase 15 166 2.3E-9 T 15-10-2018 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 AM378_17265 7849b4fdcb38afe2c44f4c1cccff9e62 179 SUPERFAMILY SSF52540 1 170 1.72E-24 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_17265 7849b4fdcb38afe2c44f4c1cccff9e62 179 TIGRFAM TIGR01313 therm_gnt_kin: carbohydrate kinase, thermoresistant glucokinase family 9 169 1.3E-63 T 15-10-2018 IPR006001 Carbohydrate kinase, thermoresistant glucokinase GO:0005975|GO:0016301 KEGG: 00030+2.7.1.12|MetaCyc: PWY-5530 AM378_15145 a2b942b9603da72538bd2ce467673b2c 231 SMART SM01007 7 198 2.3E-67 T 15-10-2018 IPR001303 Class II aldolase/adducin N-terminal AM378_15145 a2b942b9603da72538bd2ce467673b2c 231 SUPERFAMILY SSF53639 1 223 1.96E-68 T 15-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily AM378_15145 a2b942b9603da72538bd2ce467673b2c 231 Gene3D G3DSA:3.40.225.10 1 231 1.1E-60 T 15-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily AM378_15145 a2b942b9603da72538bd2ce467673b2c 231 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 7 196 2.9E-47 T 15-10-2018 IPR001303 Class II aldolase/adducin N-terminal AM378_15145 a2b942b9603da72538bd2ce467673b2c 231 TIGRFAM TIGR00760 araD: L-ribulose-5-phosphate 4-epimerase 1 231 3.1E-129 T 15-10-2018 IPR004661 L-ribulose-5-phosphate 4-epimerase GO:0008270|GO:0008742|GO:0019572 KEGG: 00040+5.1.3.4|KEGG: 00053+5.1.3.4|MetaCyc: PWY-6961 AM378_14140 326557032f4b58cde65153c63a934a62 343 Gene3D G3DSA:3.40.50.300 1 232 2.1E-78 T 15-10-2018 AM378_14140 326557032f4b58cde65153c63a934a62 343 TIGRFAM TIGR02314 ABC_MetN: D-methionine ABC transporter, ATP-binding protein 1 343 2.5E-198 T 15-10-2018 IPR012692 ABC transporter, methionine import, ATP-binding protein MetN, proteobacteria GO:0005524|GO:0009276|GO:0048473|GO:0048474 AM378_14140 326557032f4b58cde65153c63a934a62 343 SUPERFAMILY SSF52540 1 240 2.6E-85 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_14140 326557032f4b58cde65153c63a934a62 343 SMART SM00930 265 340 1.3E-25 T 15-10-2018 IPR018449 NIL domain AM378_14140 326557032f4b58cde65153c63a934a62 343 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM378_14140 326557032f4b58cde65153c63a934a62 343 Pfam PF00005 ABC transporter 21 169 1.5E-35 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM378_14140 326557032f4b58cde65153c63a934a62 343 Gene3D G3DSA:3.30.70.260 233 343 4.6E-38 T 15-10-2018 AM378_14140 326557032f4b58cde65153c63a934a62 343 Pfam PF09383 NIL domain 268 339 5.5E-19 T 15-10-2018 IPR018449 NIL domain AM378_14140 326557032f4b58cde65153c63a934a62 343 SMART SM00382 30 217 1.6E-15 T 15-10-2018 IPR003593 AAA+ ATPase domain AM378_14140 326557032f4b58cde65153c63a934a62 343 SUPERFAMILY SSF55021 248 343 6.07E-25 T 15-10-2018 AM378_20925 83b49286587674814cf63efbcf9095ed 188 TIGRFAM TIGR00038 efp: translation elongation factor P 4 187 9.7E-76 T 15-10-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 AM378_20925 83b49286587674814cf63efbcf9095ed 188 ProSitePatterns PS01275 Elongation factor P signature. 152 171 - T 15-10-2018 IPR013852 Translation elongation factor P/YeiP, conserved site AM378_20925 83b49286587674814cf63efbcf9095ed 188 Gene3D G3DSA:2.40.50.140 66 129 8.8E-29 T 15-10-2018 AM378_20925 83b49286587674814cf63efbcf9095ed 188 SUPERFAMILY SSF50249 69 128 3.08E-18 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold AM378_20925 83b49286587674814cf63efbcf9095ed 188 SMART SM00841 131 186 4.9E-31 T 15-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 AM378_20925 83b49286587674814cf63efbcf9095ed 188 SUPERFAMILY SSF50104 4 63 8.42E-18 T 15-10-2018 IPR008991 Translation protein SH3-like domain superfamily AM378_20925 83b49286587674814cf63efbcf9095ed 188 Pfam PF09285 Elongation factor P, C-terminal 131 186 4.2E-25 T 15-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 AM378_20925 83b49286587674814cf63efbcf9095ed 188 Hamap MF_00141 Elongation factor P [efp]. 3 187 48.948 T 15-10-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 AM378_20925 83b49286587674814cf63efbcf9095ed 188 Pfam PF01132 Elongation factor P (EF-P) OB domain 71 123 6.7E-23 T 15-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 AM378_20925 83b49286587674814cf63efbcf9095ed 188 SUPERFAMILY SSF50249 130 187 5.82E-18 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold AM378_20925 83b49286587674814cf63efbcf9095ed 188 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 5 61 7.1E-24 T 15-10-2018 IPR013185 Translation elongation factor, KOW-like AM378_20925 83b49286587674814cf63efbcf9095ed 188 Gene3D G3DSA:2.30.30.30 1 65 9.9E-28 T 15-10-2018 IPR014722 Ribosomal protein L2, domain 2 AM378_20925 83b49286587674814cf63efbcf9095ed 188 Gene3D G3DSA:2.40.50.140 130 188 3.4E-27 T 15-10-2018 AM378_20925 83b49286587674814cf63efbcf9095ed 188 SMART SM01185 69 123 1.2E-26 T 15-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 AM378_20925 83b49286587674814cf63efbcf9095ed 188 PIRSF PIRSF005901 2 188 9.8E-66 T 15-10-2018 IPR020599 Translation elongation factor P/YeiP AM378_18950 514a64ecd6a61e2c8f3f6aab598859af 257 Pfam PF00535 Glycosyl transferase family 2 8 138 2.1E-19 T 15-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 AM378_18950 514a64ecd6a61e2c8f3f6aab598859af 257 Gene3D G3DSA:3.90.550.10 1 219 6.7E-28 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AM378_18950 514a64ecd6a61e2c8f3f6aab598859af 257 SUPERFAMILY SSF53448 3 160 6.66E-29 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AM378_02625 48fe7409d8247eba8e8e19555a41366f 502 SUPERFAMILY SSF52540 249 489 3.4E-41 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_02625 48fe7409d8247eba8e8e19555a41366f 502 Gene3D G3DSA:3.40.50.300 1 249 5.3E-59 T 15-10-2018 AM378_02625 48fe7409d8247eba8e8e19555a41366f 502 ProSitePatterns PS00211 ABC transporters family signature. 403 417 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM378_02625 48fe7409d8247eba8e8e19555a41366f 502 Pfam PF00005 ABC transporter 276 430 1.0E-16 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM378_02625 48fe7409d8247eba8e8e19555a41366f 502 Pfam PF00005 ABC transporter 25 174 6.0E-28 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM378_02625 48fe7409d8247eba8e8e19555a41366f 502 SUPERFAMILY SSF52540 8 232 6.53E-57 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_02625 48fe7409d8247eba8e8e19555a41366f 502 SMART SM00382 34 229 7.4E-9 T 15-10-2018 IPR003593 AAA+ ATPase domain AM378_02625 48fe7409d8247eba8e8e19555a41366f 502 SMART SM00382 284 479 3.8 T 15-10-2018 IPR003593 AAA+ ATPase domain AM378_02625 48fe7409d8247eba8e8e19555a41366f 502 Gene3D G3DSA:3.40.50.300 259 497 1.2E-37 T 15-10-2018 AM378_09710 f9b46e8bef4d37a98efa48793d044ecb 251 SUPERFAMILY SSF117143 77 209 9.02E-18 T 15-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like AM378_09710 f9b46e8bef4d37a98efa48793d044ecb 251 Pfam PF00460 Flagella basal body rod protein 5 35 1.3E-9 T 15-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 AM378_09710 f9b46e8bef4d37a98efa48793d044ecb 251 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 171 247 4.0E-21 T 15-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain AM378_09710 f9b46e8bef4d37a98efa48793d044ecb 251 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 120 7.7E-33 T 15-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G AM378_15020 4588c7e49fc0bc37c51f43afafe008fd 128 Gene3D G3DSA:2.40.50.100 2 128 1.3E-49 T 15-10-2018 AM378_15020 4588c7e49fc0bc37c51f43afafe008fd 128 TIGRFAM TIGR00527 gcvH: glycine cleavage system H protein 3 126 7.0E-52 T 15-10-2018 IPR017453 Glycine cleavage system H-protein, subgroup GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 AM378_15020 4588c7e49fc0bc37c51f43afafe008fd 128 Pfam PF01597 Glycine cleavage H-protein 8 126 5.1E-45 T 15-10-2018 IPR033753 Glycine cleavage system H-protein/Simiate AM378_15020 4588c7e49fc0bc37c51f43afafe008fd 128 Hamap MF_00272 Glycine cleavage system H protein [gcvH]. 5 127 40.834 T 15-10-2018 IPR002930 Glycine cleavage system H-protein GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 AM378_15020 4588c7e49fc0bc37c51f43afafe008fd 128 SUPERFAMILY SSF51230 4 127 1.57E-43 T 15-10-2018 IPR011053 Single hybrid motif AM378_15020 4588c7e49fc0bc37c51f43afafe008fd 128 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 49 78 - T 15-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 AM378_18745 201de76e7f6d6f4440f83319645475bc 281 PRINTS PR00783 Major intrinsic protein family signature 153 171 2.4E-50 T 15-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 AM378_18745 201de76e7f6d6f4440f83319645475bc 281 PRINTS PR00783 Major intrinsic protein family signature 186 208 2.4E-50 T 15-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 AM378_18745 201de76e7f6d6f4440f83319645475bc 281 PRINTS PR00783 Major intrinsic protein family signature 11 30 2.4E-50 T 15-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 AM378_18745 201de76e7f6d6f4440f83319645475bc 281 PRINTS PR00783 Major intrinsic protein family signature 50 74 2.4E-50 T 15-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 AM378_18745 201de76e7f6d6f4440f83319645475bc 281 PRINTS PR00783 Major intrinsic protein family signature 87 106 2.4E-50 T 15-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 AM378_18745 201de76e7f6d6f4440f83319645475bc 281 PRINTS PR00783 Major intrinsic protein family signature 236 256 2.4E-50 T 15-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 AM378_18745 201de76e7f6d6f4440f83319645475bc 281 SUPERFAMILY SSF81338 11 259 5.76E-78 T 15-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 AM378_18745 201de76e7f6d6f4440f83319645475bc 281 Gene3D G3DSA:1.20.1080.10 4 261 1.5E-106 T 15-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 AM378_18745 201de76e7f6d6f4440f83319645475bc 281 TIGRFAM TIGR00861 MIP: MIP family channel proteins 15 253 9.5E-72 T 15-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 AM378_18745 201de76e7f6d6f4440f83319645475bc 281 Pfam PF00230 Major intrinsic protein 5 253 1.8E-70 T 15-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 AM378_18745 201de76e7f6d6f4440f83319645475bc 281 ProSitePatterns PS00221 MIP family signature. 68 76 - T 15-10-2018 IPR022357 Major intrinsic protein, conserved site Reactome: R-HSA-432047 AM378_07950 ea8346450504183197e231af8735b2c2 86 Gene3D G3DSA:3.30.1660.10 20 86 3.3E-16 T 15-10-2018 IPR025543 Dodecin-like AM378_07950 ea8346450504183197e231af8735b2c2 86 SUPERFAMILY SSF159871 3 86 1.14E-23 T 15-10-2018 IPR036275 YdgH-like superfamily AM378_07950 ea8346450504183197e231af8735b2c2 86 Pfam PF07338 Protein of unknown function (DUF1471) 35 86 5.4E-16 T 15-10-2018 IPR010854 Domain of unknown function DUF1471 AM378_13050 fad6486fa7c940dbbdd22477e8a35deb 496 Pfam PF06029 AlkA N-terminal domain 209 323 1.2E-32 T 15-10-2018 IPR010316 DNA-3-methyladenine glycosylase AlkA, N-terminal AM378_13050 fad6486fa7c940dbbdd22477e8a35deb 496 Gene3D G3DSA:3.30.310.20 208 323 1.8E-36 T 15-10-2018 IPR037046 DNA-3-methyladenine glycosylase AlkA, N-terminal domain superfamily AM378_13050 fad6486fa7c940dbbdd22477e8a35deb 496 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 330 420 6.6E-6 T 15-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 AM378_13050 fad6486fa7c940dbbdd22477e8a35deb 496 SMART SM01009 208 323 6.9E-49 T 15-10-2018 IPR010316 DNA-3-methyladenine glycosylase AlkA, N-terminal AM378_13050 fad6486fa7c940dbbdd22477e8a35deb 496 Gene3D G3DSA:1.10.1670.10 444 495 3.8E-26 T 15-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 AM378_13050 fad6486fa7c940dbbdd22477e8a35deb 496 Pfam PF12833 Helix-turn-helix domain 116 193 1.3E-23 T 15-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM378_13050 fad6486fa7c940dbbdd22477e8a35deb 496 Gene3D G3DSA:1.10.10.60 92 198 3.0E-25 T 15-10-2018 AM378_13050 fad6486fa7c940dbbdd22477e8a35deb 496 SUPERFAMILY SSF57884 11 86 2.62E-31 T 15-10-2018 IPR035451 Ada-like domain superfamily AM378_13050 fad6486fa7c940dbbdd22477e8a35deb 496 SUPERFAMILY SSF48150 313 487 2.27E-42 T 15-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 AM378_13050 fad6486fa7c940dbbdd22477e8a35deb 496 SUPERFAMILY SSF46689 147 195 1.34E-9 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AM378_13050 fad6486fa7c940dbbdd22477e8a35deb 496 Gene3D G3DSA:1.10.340.30 324 442 3.7E-30 T 15-10-2018 AM378_13050 fad6486fa7c940dbbdd22477e8a35deb 496 Gene3D G3DSA:3.40.10.10 14 83 2.0E-28 T 15-10-2018 IPR035451 Ada-like domain superfamily AM378_13050 fad6486fa7c940dbbdd22477e8a35deb 496 SMART SM00478 333 489 3.3E-13 T 15-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 AM378_13050 fad6486fa7c940dbbdd22477e8a35deb 496 Pfam PF02805 Metal binding domain of Ada 18 81 9.1E-29 T 15-10-2018 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 AM378_13050 fad6486fa7c940dbbdd22477e8a35deb 496 SUPERFAMILY SSF55945 209 307 2.2E-24 T 15-10-2018 AM378_13050 fad6486fa7c940dbbdd22477e8a35deb 496 SUPERFAMILY SSF46689 93 143 1.79E-7 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AM378_13050 fad6486fa7c940dbbdd22477e8a35deb 496 SMART SM00342 110 193 1.8E-24 T 15-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM378_16705 4d3c36ce6770ff42618753e146ff115d 217 Pfam PF14187 Domain of unknown function (DUF4310) 7 214 1.8E-106 T 15-10-2018 IPR025456 Protein of unknown function DUF4310 AM378_16705 4d3c36ce6770ff42618753e146ff115d 217 TIGRFAM TIGR03579 EF_0833: conserved hypothetical protein EF_0833/AHA_3914 8 216 6.9E-120 T 15-10-2018 IPR025456 Protein of unknown function DUF4310 AM378_10315 5691aa139ef95fddf879b539ebae1ab6 688 SUPERFAMILY SSF54637 532 682 1.91E-34 T 15-10-2018 IPR029069 HotDog domain superfamily AM378_10315 5691aa139ef95fddf879b539ebae1ab6 688 SUPERFAMILY SSF53720 4 507 1.03E-79 T 15-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 AM378_10315 5691aa139ef95fddf879b539ebae1ab6 688 Gene3D G3DSA:3.40.605.10 10 490 1.0E-150 T 15-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 AM378_10315 5691aa139ef95fddf879b539ebae1ab6 688 Gene3D G3DSA:3.10.129.10 528 682 6.5E-42 T 15-10-2018 AM378_10315 5691aa139ef95fddf879b539ebae1ab6 688 Pfam PF01575 MaoC like domain 544 646 7.4E-29 T 15-10-2018 IPR002539 MaoC-like dehydratase domain AM378_10315 5691aa139ef95fddf879b539ebae1ab6 688 Gene3D G3DSA:3.40.309.10 259 478 1.0E-150 T 15-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 AM378_10315 5691aa139ef95fddf879b539ebae1ab6 688 TIGRFAM TIGR02278 PaaN-DH: phenylacetic acid degradation protein paaN 4 681 0.0 T 15-10-2018 IPR011966 Phenylacetic acid degradation protein PaaN KEGG: 00360+3.3.2.12+1.2.1.91 AM378_10315 5691aa139ef95fddf879b539ebae1ab6 688 Pfam PF00171 Aldehyde dehydrogenase family 24 502 1.2E-60 T 15-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 AM378_14875 031519942b8c8820cd06f415ba560aa3 472 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 365 471 4.6E-16 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AM378_14875 031519942b8c8820cd06f415ba560aa3 472 SMART SM00388 255 320 3.7E-14 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM378_14875 031519942b8c8820cd06f415ba560aa3 472 Pfam PF00512 His Kinase A (phospho-acceptor) domain 260 319 2.6E-13 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM378_14875 031519942b8c8820cd06f415ba560aa3 472 SUPERFAMILY SSF103190 67 178 1.88E-13 T 15-10-2018 IPR029151 Periplasmic sensor-like domain superfamily AM378_14875 031519942b8c8820cd06f415ba560aa3 472 Pfam PF14827 Double sensory domain of two-component sensor kinase 48 169 7.8E-7 T 15-10-2018 IPR029150 Double Cache domain 3 AM378_14875 031519942b8c8820cd06f415ba560aa3 472 Pfam PF00672 HAMP domain 204 251 3.6E-6 T 15-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AM378_14875 031519942b8c8820cd06f415ba560aa3 472 SMART SM00304 204 255 0.0026 T 15-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AM378_14875 031519942b8c8820cd06f415ba560aa3 472 Gene3D G3DSA:3.30.450.20 49 166 1.9E-7 T 15-10-2018 AM378_14875 031519942b8c8820cd06f415ba560aa3 472 PRINTS PR00344 Bacterial sensor protein C-terminal signature 434 452 6.0E-6 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM378_14875 031519942b8c8820cd06f415ba560aa3 472 PRINTS PR00344 Bacterial sensor protein C-terminal signature 419 429 6.0E-6 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM378_14875 031519942b8c8820cd06f415ba560aa3 472 PRINTS PR00344 Bacterial sensor protein C-terminal signature 401 415 6.0E-6 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM378_14875 031519942b8c8820cd06f415ba560aa3 472 SUPERFAMILY SSF47384 253 319 2.55E-14 T 15-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AM378_14875 031519942b8c8820cd06f415ba560aa3 472 Gene3D G3DSA:1.10.287.130 204 316 2.5E-14 T 15-10-2018 AM378_14875 031519942b8c8820cd06f415ba560aa3 472 Gene3D G3DSA:3.30.565.10 324 472 1.0E-33 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AM378_14875 031519942b8c8820cd06f415ba560aa3 472 SUPERFAMILY SSF55874 310 470 9.43E-35 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AM378_14875 031519942b8c8820cd06f415ba560aa3 472 SMART SM00387 364 472 1.7E-25 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AM378_04855 221ffd8af721ec068a9a776fa8f97435 562 ProSitePatterns PS01130 SLC26A transporters signature. 58 79 - T 15-10-2018 IPR018045 Sulphate anion transporter, conserved site GO:0008271|GO:0008272 Reactome: R-HSA-427601 AM378_04855 221ffd8af721ec068a9a776fa8f97435 562 TIGRFAM TIGR00815 sulP: sulfate permease 18 556 7.4E-133 T 15-10-2018 IPR001902 SLC26A/SulP transporter GO:0008271|GO:0008272|GO:0016020|GO:0055085 AM378_04855 221ffd8af721ec068a9a776fa8f97435 562 Gene3D G3DSA:3.30.750.24 444 559 4.7E-22 T 15-10-2018 IPR036513 STAS domain superfamily AM378_04855 221ffd8af721ec068a9a776fa8f97435 562 Pfam PF00916 Sulfate permease family 29 414 1.6E-78 T 15-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 AM378_04855 221ffd8af721ec068a9a776fa8f97435 562 Pfam PF01740 STAS domain 458 556 1.7E-9 T 15-10-2018 IPR002645 STAS domain AM378_04855 221ffd8af721ec068a9a776fa8f97435 562 SUPERFAMILY SSF52091 456 559 1.06E-12 T 15-10-2018 IPR036513 STAS domain superfamily AM378_05645 029834dfa414e21e642729cce0803420 161 Gene3D G3DSA:3.40.30.10 2 161 5.5E-56 T 15-10-2018 AM378_05645 029834dfa414e21e642729cce0803420 161 SUPERFAMILY SSF52833 6 161 2.19E-53 T 15-10-2018 IPR036249 Thioredoxin-like superfamily AM378_05645 029834dfa414e21e642729cce0803420 161 Pfam PF00255 Glutathione peroxidase 9 112 3.1E-36 T 15-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 AM378_05645 029834dfa414e21e642729cce0803420 161 PRINTS PR01011 Glutathione peroxidase family signature 124 133 4.6E-18 T 15-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 AM378_05645 029834dfa414e21e642729cce0803420 161 PRINTS PR01011 Glutathione peroxidase family signature 58 74 4.6E-18 T 15-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 AM378_05645 029834dfa414e21e642729cce0803420 161 PRINTS PR01011 Glutathione peroxidase family signature 23 40 4.6E-18 T 15-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 AM378_05645 029834dfa414e21e642729cce0803420 161 ProSitePatterns PS00763 Glutathione peroxidases signature 2. 61 68 - T 15-10-2018 IPR029760 Glutathione peroxidase conserved site Reactome: R-HSA-3299685 AM378_05645 029834dfa414e21e642729cce0803420 161 PIRSF PIRSF000303 1 161 2.1E-56 T 15-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 AM378_23055 5a080606bca74aba096d7b4a773a3a8c 223 PIRSF PIRSF000370 1 223 1.8E-71 T 15-10-2018 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 AM378_23055 5a080606bca74aba096d7b4a773a3a8c 223 TIGRFAM TIGR04322 rSAM_QueE_Ecoli: putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE 9 223 5.1E-115 T 15-10-2018 IPR027609 Putative 7-carboxy-7-deazaguanine synthase QueE, Proteobacteria KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 AM378_23055 5a080606bca74aba096d7b4a773a3a8c 223 SUPERFAMILY SSF102114 24 121 2.09E-7 T 15-10-2018 AM378_23055 5a080606bca74aba096d7b4a773a3a8c 223 Gene3D G3DSA:3.20.20.70 2 223 2.8E-56 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM378_23055 5a080606bca74aba096d7b4a773a3a8c 223 Hamap MF_00917 7-carboxy-7-deazaguanine synthase [queE]. 3 223 38.254 T 15-10-2018 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 AM378_23055 5a080606bca74aba096d7b4a773a3a8c 223 Pfam PF04055 Radical SAM superfamily 27 124 1.3E-8 T 15-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AM378_23055 5a080606bca74aba096d7b4a773a3a8c 223 Pfam PF13394 4Fe-4S single cluster domain 24 128 2.4E-12 T 15-10-2018 AM378_13905 c72580894df9c26cc2c77b360bbd7b76 148 Pfam PF06711 Protein of unknown function (DUF1198) 1 142 1.7E-63 T 15-10-2018 IPR009587 Protein of unknown function DUF1198 AM378_13905 c72580894df9c26cc2c77b360bbd7b76 148 ProDom PD093913 YICN MEMBRANE INNER EXPORTED 1 144 3.0E-48 T 15-10-2018 IPR009587 Protein of unknown function DUF1198 AM378_17785 9771a0679d646b8e6b60a0fe23f258d5 266 Pfam PF01226 Formate/nitrite transporter 20 247 3.0E-57 T 15-10-2018 IPR000292 Formate/nitrite transporter GO:0016020|GO:0022857|GO:0055085 AM378_17785 9771a0679d646b8e6b60a0fe23f258d5 266 Gene3D G3DSA:1.20.1080.10 1 261 7.0E-92 T 15-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 AM378_17785 9771a0679d646b8e6b60a0fe23f258d5 266 ProSitePatterns PS01006 Formate and nitrite transporters signature 2. 157 167 - T 15-10-2018 IPR024002 Formate/nitrite transporter, conserved site AM378_17785 9771a0679d646b8e6b60a0fe23f258d5 266 TIGRFAM TIGR00790 fnt: formate/nitrite transporter 20 250 3.0E-80 T 15-10-2018 IPR000292 Formate/nitrite transporter GO:0016020|GO:0022857|GO:0055085 AM378_17785 9771a0679d646b8e6b60a0fe23f258d5 266 ProSitePatterns PS01005 Formate and nitrite transporters signature 1. 73 82 - T 15-10-2018 IPR024002 Formate/nitrite transporter, conserved site AM378_05115 10ad2cff1f6ca0efb9a12d24831c0719 70 Pfam PF00313 'Cold-shock' DNA-binding domain 5 69 7.1E-31 T 15-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AM378_05115 10ad2cff1f6ca0efb9a12d24831c0719 70 ProSitePatterns PS00352 'Cold-shock' domain signature. 18 37 - T 15-10-2018 IPR019844 Cold-shock conserved site AM378_05115 10ad2cff1f6ca0efb9a12d24831c0719 70 Gene3D G3DSA:2.40.50.140 2 69 9.8E-28 T 15-10-2018 AM378_05115 10ad2cff1f6ca0efb9a12d24831c0719 70 PIRSF PIRSF002599 1 70 2.4E-23 T 15-10-2018 IPR012156 Cold shock, CspA GO:0003676 AM378_05115 10ad2cff1f6ca0efb9a12d24831c0719 70 SUPERFAMILY SSF50249 2 69 6.34E-24 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold AM378_05115 10ad2cff1f6ca0efb9a12d24831c0719 70 SMART SM00357 6 70 2.7E-28 T 15-10-2018 IPR011129 Cold shock domain GO:0003676 AM378_05115 10ad2cff1f6ca0efb9a12d24831c0719 70 PRINTS PR00050 Cold shock protein signature 43 61 1.9E-16 T 15-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AM378_05115 10ad2cff1f6ca0efb9a12d24831c0719 70 PRINTS PR00050 Cold shock protein signature 7 22 1.9E-16 T 15-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AM378_05115 10ad2cff1f6ca0efb9a12d24831c0719 70 PRINTS PR00050 Cold shock protein signature 28 37 1.9E-16 T 15-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AM378_20385 9032627d55972ab3fc49565804962f24 245 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 13 239 5.2E-41 T 15-10-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 AM378_20385 9032627d55972ab3fc49565804962f24 245 Gene3D G3DSA:3.20.20.190 9 236 7.8E-83 T 15-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 AM378_20385 9032627d55972ab3fc49565804962f24 245 SUPERFAMILY SSF51695 6 240 3.66E-64 T 15-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 AM378_12515 f328e342824c7ae0a1937c7827306f98 528 Gene3D G3DSA:3.10.105.10 285 502 1.4E-179 T 15-10-2018 AM378_12515 f328e342824c7ae0a1937c7827306f98 528 Gene3D G3DSA:3.90.76.10 43 203 1.4E-179 T 15-10-2018 AM378_12515 f328e342824c7ae0a1937c7827306f98 528 PIRSF PIRSF002741 16 528 5.3E-110 T 15-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 AM378_12515 f328e342824c7ae0a1937c7827306f98 528 SUPERFAMILY SSF53850 22 526 7.53E-150 T 15-10-2018 AM378_12515 f328e342824c7ae0a1937c7827306f98 528 Gene3D G3DSA:3.40.190.10 204 515 1.4E-179 T 15-10-2018 AM378_12515 f328e342824c7ae0a1937c7827306f98 528 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 66 445 3.8E-97 T 15-10-2018 IPR000914 Solute-binding protein family 5 domain AM378_02375 3d2d95d6fe3753219ace599c8d370652 488 Gene3D G3DSA:1.10.287.130 262 333 9.2E-21 T 15-10-2018 AM378_02375 3d2d95d6fe3753219ace599c8d370652 488 SUPERFAMILY SSF158472 199 256 3.27E-5 T 15-10-2018 AM378_02375 3d2d95d6fe3753219ace599c8d370652 488 Gene3D G3DSA:3.30.565.10 339 488 5.8E-35 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AM378_02375 3d2d95d6fe3753219ace599c8d370652 488 SMART SM00388 266 334 5.3E-17 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM378_02375 3d2d95d6fe3753219ace599c8d370652 488 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 385 487 7.5E-17 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AM378_02375 3d2d95d6fe3753219ace599c8d370652 488 SUPERFAMILY SSF47384 249 334 3.14E-18 T 15-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AM378_02375 3d2d95d6fe3753219ace599c8d370652 488 Gene3D G3DSA:1.20.1480.50 164 261 1.9E-5 T 15-10-2018 AM378_02375 3d2d95d6fe3753219ace599c8d370652 488 Pfam PF00672 HAMP domain 200 254 4.1E-9 T 15-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AM378_02375 3d2d95d6fe3753219ace599c8d370652 488 SMART SM00387 380 488 1.7E-23 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AM378_02375 3d2d95d6fe3753219ace599c8d370652 488 SUPERFAMILY SSF55874 324 486 2.1E-37 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AM378_02375 3d2d95d6fe3753219ace599c8d370652 488 Pfam PF00512 His Kinase A (phospho-acceptor) domain 267 334 3.4E-14 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM378_02375 3d2d95d6fe3753219ace599c8d370652 488 PRINTS PR00344 Bacterial sensor protein C-terminal signature 449 467 5.4E-8 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM378_02375 3d2d95d6fe3753219ace599c8d370652 488 PRINTS PR00344 Bacterial sensor protein C-terminal signature 417 431 5.4E-8 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM378_02375 3d2d95d6fe3753219ace599c8d370652 488 PRINTS PR00344 Bacterial sensor protein C-terminal signature 473 486 5.4E-8 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM378_02375 3d2d95d6fe3753219ace599c8d370652 488 SMART SM00304 199 258 0.0012 T 15-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AM378_12035 56badc905e9a14eb979621fd4cfff352 488 SMART SM00345 17 76 1.6E-15 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM378_12035 56badc905e9a14eb979621fd4cfff352 488 Pfam PF00155 Aminotransferase class I and II 130 474 1.8E-29 T 15-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AM378_12035 56badc905e9a14eb979621fd4cfff352 488 Gene3D G3DSA:3.40.640.10 153 372 2.9E-115 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AM378_12035 56badc905e9a14eb979621fd4cfff352 488 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 50 66 3.6E-6 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM378_12035 56badc905e9a14eb979621fd4cfff352 488 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 36 50 3.6E-6 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM378_12035 56badc905e9a14eb979621fd4cfff352 488 SUPERFAMILY SSF46785 6 85 5.06E-21 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM378_12035 56badc905e9a14eb979621fd4cfff352 488 Gene3D G3DSA:1.10.10.10 10 104 3.5E-22 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_12035 56badc905e9a14eb979621fd4cfff352 488 SUPERFAMILY SSF53383 102 481 3.58E-98 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM378_12035 56badc905e9a14eb979621fd4cfff352 488 Gene3D G3DSA:3.90.1150.10 116 478 2.9E-115 T 15-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AM378_12035 56badc905e9a14eb979621fd4cfff352 488 Pfam PF00392 Bacterial regulatory proteins, gntR family 13 76 7.4E-17 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM378_13725 9f7ac67fdd9285b3416df8a468f3cd4d 241 ProDom PD037484 CAPSID DETERMINATION SIZE HEAD GLYCOPROTEIN SID MORPHOGENESIS CP-933I ENCODED LATE 10 209 7.0E-26 T 15-10-2018 AM378_13510 464ba451fb17bbe092a75ae12602f954 446 Gene3D G3DSA:1.10.10.60 388 442 3.7E-10 T 15-10-2018 AM378_13510 464ba451fb17bbe092a75ae12602f954 446 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 224 239 - T 15-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AM378_13510 464ba451fb17bbe092a75ae12602f954 446 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 351 360 - T 15-10-2018 IPR025944 Sigma-54 interaction domain, conserved site AM378_13510 464ba451fb17bbe092a75ae12602f954 446 SUPERFAMILY SSF46689 351 439 1.66E-8 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AM378_13510 464ba451fb17bbe092a75ae12602f954 446 SMART SM00448 7 118 6.5E-35 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM378_13510 464ba451fb17bbe092a75ae12602f954 446 Gene3D G3DSA:1.10.8.60 309 387 5.2E-22 T 15-10-2018 AM378_13510 464ba451fb17bbe092a75ae12602f954 446 SUPERFAMILY SSF52540 137 381 2.19E-70 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_13510 464ba451fb17bbe092a75ae12602f954 446 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 162 175 - T 15-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 AM378_13510 464ba451fb17bbe092a75ae12602f954 446 SMART SM00382 158 301 1.6E-9 T 15-10-2018 IPR003593 AAA+ ATPase domain AM378_13510 464ba451fb17bbe092a75ae12602f954 446 Gene3D G3DSA:3.40.50.300 134 308 6.4E-63 T 15-10-2018 AM378_13510 464ba451fb17bbe092a75ae12602f954 446 Gene3D G3DSA:3.40.50.2300 4 133 6.2E-38 T 15-10-2018 AM378_13510 464ba451fb17bbe092a75ae12602f954 446 SUPERFAMILY SSF52172 6 182 1.17E-43 T 15-10-2018 IPR011006 CheY-like superfamily AM378_13510 464ba451fb17bbe092a75ae12602f954 446 Pfam PF00072 Response regulator receiver domain 10 118 2.0E-31 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM378_13510 464ba451fb17bbe092a75ae12602f954 446 Pfam PF00158 Sigma-54 interaction domain 138 304 5.0E-72 T 15-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 AM378_04885 87b77afff530e098ec08a2e2ec370113 415 TIGRFAM TIGR02212 lolCE: lipoprotein releasing system, transmembrane protein, LolC/E family 6 414 7.6E-158 T 15-10-2018 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E GO:0016021|GO:0042953|GO:0042954 AM378_04885 87b77afff530e098ec08a2e2ec370113 415 TIGRFAM TIGR02213 lolE_release: lipoprotein releasing system, transmembrane protein LolE 5 415 3.8E-220 T 15-10-2018 IPR011926 Lipoprotein-releasing system transmembrane protein LolC/E, gammaproteobacteria type GO:0016021|GO:0042953|GO:0042954|GO:0044874 AM378_04885 87b77afff530e098ec08a2e2ec370113 415 Pfam PF12704 MacB-like periplasmic core domain 28 239 1.3E-14 T 15-10-2018 IPR025857 MacB-like periplasmic core domain AM378_04885 87b77afff530e098ec08a2e2ec370113 415 Pfam PF02687 FtsX-like permease family 302 408 1.8E-13 T 15-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 AM378_22810 4f05c3beb261c304792ddc772c409735 587 Gene3D G3DSA:3.90.1310.30 58 234 2.0E-44 T 15-10-2018 AM378_22810 4f05c3beb261c304792ddc772c409735 587 SUPERFAMILY SSF56519 62 233 1.1E-44 T 15-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 AM378_22810 4f05c3beb261c304792ddc772c409735 587 Pfam PF00905 Penicillin binding protein transpeptidase domain 259 553 3.6E-83 T 15-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 AM378_22810 4f05c3beb261c304792ddc772c409735 587 Hamap MF_02080 Peptidoglycan D,D-transpeptidase FtsI [ftsI]. 18 569 46.165 T 15-10-2018 IPR037532 Peptidoglycan D,D-transpeptidase FtsI GO:0005887|GO:0008658|GO:0008955|GO:0009252|GO:0051301 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AM378_22810 4f05c3beb261c304792ddc772c409735 587 Gene3D G3DSA:3.40.710.10 295 475 4.3E-111 T 15-10-2018 AM378_22810 4f05c3beb261c304792ddc772c409735 587 SUPERFAMILY SSF56601 234 562 4.35E-86 T 15-10-2018 IPR012338 Beta-lactamase/transpeptidase-like AM378_22810 4f05c3beb261c304792ddc772c409735 587 Pfam PF03717 Penicillin-binding Protein dimerisation domain 67 219 3.4E-18 T 15-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 AM378_22810 4f05c3beb261c304792ddc772c409735 587 Gene3D G3DSA:3.30.450.330 236 549 4.3E-111 T 15-10-2018 AM378_06495 b10f710e30467be9a60c341214cd0e8e 474 Gene3D G3DSA:3.20.20.80 3 469 1.3E-149 T 15-10-2018 AM378_06495 b10f710e30467be9a60c341214cd0e8e 474 ProSitePatterns PS00572 Glycosyl hydrolases family 1 active site. 366 374 - T 15-10-2018 IPR018120 Glycoside hydrolase family 1, active site AM378_06495 b10f710e30467be9a60c341214cd0e8e 474 Pfam PF00232 Glycosyl hydrolase family 1 8 467 1.3E-139 T 15-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 AM378_06495 b10f710e30467be9a60c341214cd0e8e 474 SUPERFAMILY SSF51445 7 467 1.73E-152 T 15-10-2018 IPR017853 Glycoside hydrolase superfamily AM378_06495 b10f710e30467be9a60c341214cd0e8e 474 ProSitePatterns PS00653 Glycosyl hydrolases family 1 N-terminal signature. 13 27 - T 15-10-2018 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site AM378_06495 b10f710e30467be9a60c341214cd0e8e 474 PRINTS PR00131 Glycosyl hydrolase family 1 signature 366 374 1.2E-13 T 15-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 AM378_06495 b10f710e30467be9a60c341214cd0e8e 474 PRINTS PR00131 Glycosyl hydrolase family 1 signature 432 444 1.2E-13 T 15-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 AM378_06495 b10f710e30467be9a60c341214cd0e8e 474 PRINTS PR00131 Glycosyl hydrolase family 1 signature 288 302 1.2E-13 T 15-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 AM378_06495 b10f710e30467be9a60c341214cd0e8e 474 PRINTS PR00131 Glycosyl hydrolase family 1 signature 387 398 1.2E-13 T 15-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 AM378_06495 b10f710e30467be9a60c341214cd0e8e 474 PRINTS PR00131 Glycosyl hydrolase family 1 signature 408 425 1.2E-13 T 15-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 AM378_18605 08eb9a84ecc879cb1381c5f72c443557 623 Gene3D G3DSA:2.170.130.10 27 157 3.8E-36 T 15-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily AM378_18605 08eb9a84ecc879cb1381c5f72c443557 623 SUPERFAMILY SSF56935 33 623 5.49E-122 T 15-10-2018 AM378_18605 08eb9a84ecc879cb1381c5f72c443557 623 Hamap MF_01531 Vitamin B12 transporter BtuB [btuB]. 4 623 35.747 T 15-10-2018 IPR010101 TonB-dependent vitamin B12 transporter BtuB GO:0015420|GO:0015889|GO:0016020 AM378_18605 08eb9a84ecc879cb1381c5f72c443557 623 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 606 623 - T 15-10-2018 IPR010917 TonB-dependent receptor, conserved site AM378_18605 08eb9a84ecc879cb1381c5f72c443557 623 Pfam PF00593 TonB dependent receptor 246 622 2.5E-49 T 15-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel AM378_18605 08eb9a84ecc879cb1381c5f72c443557 623 Gene3D G3DSA:2.40.170.20 158 623 1.5E-163 T 15-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AM378_18605 08eb9a84ecc879cb1381c5f72c443557 623 TIGRFAM TIGR01779 TonB-B12: TonB-dependent vitamin B12 receptor 5 623 1.1E-235 T 15-10-2018 IPR010101 TonB-dependent vitamin B12 transporter BtuB GO:0015420|GO:0015889|GO:0016020 AM378_18605 08eb9a84ecc879cb1381c5f72c443557 623 Pfam PF07715 TonB-dependent Receptor Plug Domain 46 152 5.5E-28 T 15-10-2018 IPR012910 TonB-dependent receptor, plug domain AM378_18835 16b0ced106ea21bfbae72f9df3b05df4 273 Pfam PF06426 Serine acetyltransferase, N-terminal 9 113 4.1E-37 T 15-10-2018 IPR010493 Serine acetyltransferase, N-terminal GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 AM378_18835 16b0ced106ea21bfbae72f9df3b05df4 273 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 202 230 - T 15-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 AM378_18835 16b0ced106ea21bfbae72f9df3b05df4 273 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 193 226 2.1E-9 T 15-10-2018 IPR001451 Hexapeptide repeat AM378_18835 16b0ced106ea21bfbae72f9df3b05df4 273 SMART SM00971 9 113 3.6E-59 T 15-10-2018 IPR010493 Serine acetyltransferase, N-terminal GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 AM378_18835 16b0ced106ea21bfbae72f9df3b05df4 273 Gene3D G3DSA:2.160.10.10 143 273 4.8E-38 T 15-10-2018 AM378_18835 16b0ced106ea21bfbae72f9df3b05df4 273 TIGRFAM TIGR01172 cysE: serine O-acetyltransferase 83 242 1.6E-73 T 15-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 AM378_18835 16b0ced106ea21bfbae72f9df3b05df4 273 PIRSF PIRSF000441 75 265 1.2E-58 T 15-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 AM378_18835 16b0ced106ea21bfbae72f9df3b05df4 273 SUPERFAMILY SSF51161 8 260 3.47E-66 T 15-10-2018 IPR011004 Trimeric LpxA-like superfamily AM378_18835 16b0ced106ea21bfbae72f9df3b05df4 273 Gene3D G3DSA:1.10.3130.10 1 142 2.5E-52 T 15-10-2018 AM378_10795 7a671dc6057df1dd6dc2d425cb1f3ef4 396 TIGRFAM TIGR00543 isochor_syn: isochorismate synthase 108 388 5.5E-92 T 15-10-2018 IPR004561 Isochorismate synthase GO:0008909|GO:0009058 KEGG: 00130+5.4.4.2|MetaCyc: PWY-5837|MetaCyc: PWY-5901|MetaCyc: PWY-6406 AM378_10795 7a671dc6057df1dd6dc2d425cb1f3ef4 396 Pfam PF00425 chorismate binding enzyme 127 381 1.2E-76 T 15-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal AM378_10795 7a671dc6057df1dd6dc2d425cb1f3ef4 396 SUPERFAMILY SSF56322 52 391 9.81E-97 T 15-10-2018 IPR005801 ADC synthase GO:0009058 AM378_10795 7a671dc6057df1dd6dc2d425cb1f3ef4 396 PRINTS PR00095 Anthranilate synthase component I signature 230 243 8.8E-5 T 15-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AM378_10795 7a671dc6057df1dd6dc2d425cb1f3ef4 396 PRINTS PR00095 Anthranilate synthase component I signature 244 257 8.8E-5 T 15-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AM378_10795 7a671dc6057df1dd6dc2d425cb1f3ef4 396 PRINTS PR00095 Anthranilate synthase component I signature 323 337 8.8E-5 T 15-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AM378_10795 7a671dc6057df1dd6dc2d425cb1f3ef4 396 PRINTS PR00095 Anthranilate synthase component I signature 338 352 8.8E-5 T 15-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AM378_10795 7a671dc6057df1dd6dc2d425cb1f3ef4 396 Gene3D G3DSA:3.60.120.10 5 392 2.3E-131 T 15-10-2018 IPR005801 ADC synthase GO:0009058 AM378_12755 777f26b00a2c94de812c85826c042c8b 191 Gene3D G3DSA:3.90.79.10 1 191 5.1E-60 T 15-10-2018 AM378_12755 777f26b00a2c94de812c85826c042c8b 191 Pfam PF00293 NUDIX domain 45 166 4.9E-11 T 15-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 AM378_12755 777f26b00a2c94de812c85826c042c8b 191 TIGRFAM TIGR00052 TIGR00052: nudix-type nucleoside diphosphatase, YffH/AdpP family 9 186 1.4E-60 T 15-10-2018 IPR004385 Nucleoside diphosphate pyrophosphatase GO:0016818|GO:0046872 Reactome: R-HSA-480985 AM378_12755 777f26b00a2c94de812c85826c042c8b 191 SUPERFAMILY SSF55811 10 188 1.0E-50 T 15-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 AM378_21960 59a249cc8f1a1264eb06f8ed9811f572 291 Gene3D G3DSA:3.20.80.10 122 286 1.4E-36 T 15-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily AM378_21960 59a249cc8f1a1264eb06f8ed9811f572 291 SUPERFAMILY SSF55136 123 282 7.85E-25 T 15-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily AM378_21960 59a249cc8f1a1264eb06f8ed9811f572 291 SMART SM00342 21 104 1.1E-29 T 15-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM378_21960 59a249cc8f1a1264eb06f8ed9811f572 291 Pfam PF06445 GyrI-like small molecule binding domain 129 282 6.7E-11 T 15-10-2018 IPR029442 GyrI-like small molecule binding domain AM378_21960 59a249cc8f1a1264eb06f8ed9811f572 291 Pfam PF12833 Helix-turn-helix domain 27 105 1.2E-20 T 15-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM378_21960 59a249cc8f1a1264eb06f8ed9811f572 291 SMART SM00871 126 282 1.5E-6 T 15-10-2018 IPR010499 Bacterial transcription activator, effector binding AM378_21960 59a249cc8f1a1264eb06f8ed9811f572 291 SUPERFAMILY SSF46689 5 55 2.24E-10 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AM378_21960 59a249cc8f1a1264eb06f8ed9811f572 291 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 58 100 - T 15-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AM378_21960 59a249cc8f1a1264eb06f8ed9811f572 291 Gene3D G3DSA:1.10.10.60 56 121 6.4E-19 T 15-10-2018 AM378_21960 59a249cc8f1a1264eb06f8ed9811f572 291 Gene3D G3DSA:1.10.10.60 3 55 6.6E-26 T 15-10-2018 AM378_21960 59a249cc8f1a1264eb06f8ed9811f572 291 SUPERFAMILY SSF46689 57 109 6.31E-12 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AM378_07435 9f83102e96898610c110af95f9b26478 177 SUPERFAMILY SSF55961 2 177 2.14E-39 T 15-10-2018 AM378_07435 9f83102e96898610c110af95f9b26478 177 Gene3D G3DSA:3.30.530.20 4 177 8.5E-47 T 15-10-2018 IPR023393 START-like domain superfamily AM378_07435 9f83102e96898610c110af95f9b26478 177 Pfam PF08327 Activator of Hsp90 ATPase homolog 1-like protein 22 151 5.2E-17 T 15-10-2018 IPR013538 Activator of Hsp90 ATPase homologue 1-like AM378_00285 c51e68793f910c77b52a2613289f633e 377 Gene3D G3DSA:1.10.10.2840 251 377 6.1E-20 T 15-10-2018 AM378_00285 c51e68793f910c77b52a2613289f633e 377 Pfam PF05651 Putative sugar diacid recognition 9 141 1.9E-50 T 15-10-2018 IPR008599 Putative sugar diacid recognition AM378_00285 c51e68793f910c77b52a2613289f633e 377 Pfam PF13556 PucR C-terminal helix-turn-helix domain 317 373 2.0E-19 T 15-10-2018 IPR025736 PucR C-terminal helix-turn-helix domain AM378_05905 8fc11b1463f555677a3778a6733c0d10 217 Pfam PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region 177 217 3.6E-19 T 15-10-2018 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 AM378_05905 8fc11b1463f555677a3778a6733c0d10 217 Hamap MF_01629 Pyridoxine/pyridoxamine 5'-phosphate oxidase [pdxH]. 15 217 38.088 T 15-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 AM378_05905 8fc11b1463f555677a3778a6733c0d10 217 Gene3D G3DSA:2.30.110.10 19 217 4.3E-77 T 15-10-2018 IPR012349 FMN-binding split barrel GO:0048037 AM378_05905 8fc11b1463f555677a3778a6733c0d10 217 ProSitePatterns PS01064 Pyridoxamine 5'-phosphate oxidase signature. 187 200 - T 15-10-2018 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site GO:0016638|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 AM378_05905 8fc11b1463f555677a3778a6733c0d10 217 SUPERFAMILY SSF50475 20 217 3.55E-67 T 15-10-2018 AM378_05905 8fc11b1463f555677a3778a6733c0d10 217 TIGRFAM TIGR00558 pdxH: pyridoxamine 5'-phosphate oxidase 4 217 1.6E-94 T 15-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 AM378_05905 8fc11b1463f555677a3778a6733c0d10 217 PIRSF PIRSF000190 2 217 2.8E-82 T 15-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 AM378_05905 8fc11b1463f555677a3778a6733c0d10 217 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 39 121 4.1E-23 T 15-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 AM378_05350 608811ad2cd55730e5bb581a8b46fd08 292 Gene3D G3DSA:3.30.2010.10 64 157 9.7E-37 T 15-10-2018 AM378_05350 608811ad2cd55730e5bb581a8b46fd08 292 Hamap MF_00188 Protease HtpX [htpX]. 1 288 26.534 T 15-10-2018 IPR022919 Peptidase M48, protease HtpX, putative GO:0004222 AM378_05350 608811ad2cd55730e5bb581a8b46fd08 292 Pfam PF01435 Peptidase family M48 74 287 1.9E-39 T 15-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 AM378_05720 b5d301c341f13f28bc02cef9671575cf 138 Gene3D G3DSA:3.90.1010.10 1 138 2.6E-53 T 15-10-2018 AM378_05720 b5d301c341f13f28bc02cef9671575cf 138 Hamap MF_01832 Cysteine desulfuration protein SufE [sufE]. 1 138 42.533 T 15-10-2018 IPR023939 Cysteine desulfuration protein SufE GO:0006790|GO:0016226 AM378_05720 b5d301c341f13f28bc02cef9671575cf 138 Pfam PF02657 Fe-S metabolism associated domain 12 132 3.1E-44 T 15-10-2018 IPR003808 Fe-S metabolism associated domain, SufE-like AM378_05720 b5d301c341f13f28bc02cef9671575cf 138 SUPERFAMILY SSF82649 4 136 6.8E-46 T 15-10-2018 AM378_22665 5d4387de830d2d2589d511b33baece3e 273 SUPERFAMILY SSF46565 133 269 1.78E-29 T 15-10-2018 IPR036869 Chaperone J-domain superfamily AM378_22665 5d4387de830d2d2589d511b33baece3e 273 SMART SM00271 206 271 7.2E-16 T 15-10-2018 IPR001623 DnaJ domain AM378_22665 5d4387de830d2d2589d511b33baece3e 273 Gene3D G3DSA:1.10.3680.10 35 185 9.0E-22 T 15-10-2018 IPR029024 TerB-like AM378_22665 5d4387de830d2d2589d511b33baece3e 273 PRINTS PR00625 DnaJ domain signature 227 242 1.2E-6 T 15-10-2018 IPR001623 DnaJ domain AM378_22665 5d4387de830d2d2589d511b33baece3e 273 PRINTS PR00625 DnaJ domain signature 251 271 1.2E-6 T 15-10-2018 IPR001623 DnaJ domain AM378_22665 5d4387de830d2d2589d511b33baece3e 273 PRINTS PR00625 DnaJ domain signature 209 227 1.2E-6 T 15-10-2018 IPR001623 DnaJ domain AM378_22665 5d4387de830d2d2589d511b33baece3e 273 Pfam PF00226 DnaJ domain 210 269 5.2E-10 T 15-10-2018 IPR001623 DnaJ domain AM378_22665 5d4387de830d2d2589d511b33baece3e 273 Pfam PF05099 Tellurite resistance protein TerB 42 172 8.5E-14 T 15-10-2018 IPR007791 Co-chaperone DjlA, N-terminal AM378_22665 5d4387de830d2d2589d511b33baece3e 273 Gene3D G3DSA:1.10.287.110 186 271 1.7E-14 T 15-10-2018 IPR036869 Chaperone J-domain superfamily AM378_22665 5d4387de830d2d2589d511b33baece3e 273 Hamap MF_01153 Co-chaperone protein DjlA [djlA]. 3 272 39.235 T 15-10-2018 IPR023749 Co-chaperone DjlA GO:0051087 AM378_01730 030f8883071bc3473bc84c0a2c02ae87 97 Hamap MF_02051 (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase [lsrG]. 1 96 37.595 T 15-10-2018 IPR033672 (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase GO:0016853 AM378_01730 030f8883071bc3473bc84c0a2c02ae87 97 Pfam PF03992 Antibiotic biosynthesis monooxygenase 1 76 1.2E-18 T 15-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain AM378_01730 030f8883071bc3473bc84c0a2c02ae87 97 SUPERFAMILY SSF54909 1 91 1.34E-24 T 15-10-2018 IPR011008 Dimeric alpha-beta barrel AM378_01730 030f8883071bc3473bc84c0a2c02ae87 97 Gene3D G3DSA:3.30.70.100 1 96 1.8E-38 T 15-10-2018 AM378_11785 dfcd69933f61f482d81c53f03b56121a 183 Gene3D G3DSA:3.40.30.10 100 182 3.9E-24 T 15-10-2018 AM378_11785 dfcd69933f61f482d81c53f03b56121a 183 TIGRFAM TIGR01958 nuoE_fam: NADH-quinone oxidoreductase, E subunit 39 183 7.0E-53 T 15-10-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM378_11785 dfcd69933f61f482d81c53f03b56121a 183 PIRSF PIRSF000216 16 183 1.2E-53 T 15-10-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM378_11785 dfcd69933f61f482d81c53f03b56121a 183 ProSitePatterns PS01099 Respiratory-chain NADH dehydrogenase 24 Kd subunit signature. 140 158 - T 15-10-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM378_11785 dfcd69933f61f482d81c53f03b56121a 183 Gene3D G3DSA:1.10.10.1590 30 99 3.8E-17 T 15-10-2018 AM378_11785 dfcd69933f61f482d81c53f03b56121a 183 Pfam PF01257 Thioredoxin-like [2Fe-2S] ferredoxin 41 183 4.6E-51 T 15-10-2018 AM378_11785 dfcd69933f61f482d81c53f03b56121a 183 SUPERFAMILY SSF52833 32 182 9.51E-50 T 15-10-2018 IPR036249 Thioredoxin-like superfamily AM378_07910 45affe0d4bad34d67c965c4d77f416fe 573 Pfam PF08479 POTRA domain, ShlB-type 88 163 6.9E-16 T 15-10-2018 IPR013686 Polypeptide-transport-associated, ShlB-type AM378_07910 45affe0d4bad34d67c965c4d77f416fe 573 Pfam PF17287 POTRA domain 164 218 1.6E-18 T 15-10-2018 IPR035251 ShlB, POTRA domain AM378_07910 45affe0d4bad34d67c965c4d77f416fe 573 Gene3D G3DSA:2.40.160.50 196 573 3.9E-102 T 15-10-2018 AM378_07910 45affe0d4bad34d67c965c4d77f416fe 573 PIRSF PIRSF029745 10 573 1.3E-143 T 15-10-2018 IPR027282 Two partner secretion pathway transporter GO:0015031 AM378_07910 45affe0d4bad34d67c965c4d77f416fe 573 Pfam PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB 223 536 1.2E-99 T 15-10-2018 IPR005565 Haemolysin activator HlyB, C-terminal AM378_13800 35e006bfa6566eb80ed6a7cae2bfce6b 165 SUPERFAMILY SSF88659 106 142 7.1E-5 T 15-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like AM378_23450 a79875b6419d5bba9f74ff92c6fa2bbf 239 Pfam PF08241 Methyltransferase domain 77 125 7.4E-10 T 15-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 AM378_23450 a79875b6419d5bba9f74ff92c6fa2bbf 239 Gene3D G3DSA:3.40.50.150 50 184 1.3E-14 T 15-10-2018 AM378_23450 a79875b6419d5bba9f74ff92c6fa2bbf 239 SUPERFAMILY SSF53335 77 188 1.21E-16 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM378_15550 b8e2cf59f6dd6642014d2186d6f33b18 170 SMART SM00731 16 165 2.4E-58 T 15-10-2018 IPR006640 SprT-like AM378_15550 b8e2cf59f6dd6642014d2186d6f33b18 170 Hamap MF_00746 Protein SprT [sprT]. 12 165 40.672 T 15-10-2018 IPR023483 Uncharacterised protein family SprT AM378_15550 b8e2cf59f6dd6642014d2186d6f33b18 170 Pfam PF10263 SprT-like family 22 117 8.1E-17 T 15-10-2018 IPR006640 SprT-like AM378_15550 b8e2cf59f6dd6642014d2186d6f33b18 170 Pfam PF17283 SprT-like zinc ribbon domain 125 165 1.2E-12 T 15-10-2018 IPR035240 SprT-like, zinc ribbon domain AM378_15235 27cefcaa82e09b769fb53971f2a17d74 546 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 195 324 2.8E-23 T 15-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 AM378_15235 27cefcaa82e09b769fb53971f2a17d74 546 SUPERFAMILY SSF52467 159 351 5.4E-35 T 15-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily AM378_15235 27cefcaa82e09b769fb53971f2a17d74 546 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 6 172 1.3E-41 T 15-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 AM378_15235 27cefcaa82e09b769fb53971f2a17d74 546 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 417 436 - T 15-10-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 AM378_15235 27cefcaa82e09b769fb53971f2a17d74 546 Gene3D G3DSA:3.40.50.1220 187 351 4.4E-34 T 15-10-2018 AM378_15235 27cefcaa82e09b769fb53971f2a17d74 546 SUPERFAMILY SSF52518 364 533 1.79E-42 T 15-10-2018 IPR029061 Thiamin diphosphate-binding fold AM378_15235 27cefcaa82e09b769fb53971f2a17d74 546 SUPERFAMILY SSF52518 4 184 1.24E-39 T 15-10-2018 IPR029061 Thiamin diphosphate-binding fold AM378_15235 27cefcaa82e09b769fb53971f2a17d74 546 Gene3D G3DSA:3.40.50.970 354 536 2.6E-43 T 15-10-2018 AM378_15235 27cefcaa82e09b769fb53971f2a17d74 546 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 387 527 1.8E-30 T 15-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 AM378_15235 27cefcaa82e09b769fb53971f2a17d74 546 Gene3D G3DSA:3.40.50.970 1 184 2.3E-43 T 15-10-2018 AM378_24030 6732b54aefa788327213c508bb8f8b5b 174 PRINTS PR01100 Shikimate kinase family signature 29 42 3.0E-23 T 15-10-2018 AM378_24030 6732b54aefa788327213c508bb8f8b5b 174 PRINTS PR01100 Shikimate kinase family signature 95 112 3.0E-23 T 15-10-2018 AM378_24030 6732b54aefa788327213c508bb8f8b5b 174 PRINTS PR01100 Shikimate kinase family signature 74 83 3.0E-23 T 15-10-2018 AM378_24030 6732b54aefa788327213c508bb8f8b5b 174 PRINTS PR01100 Shikimate kinase family signature 57 65 3.0E-23 T 15-10-2018 AM378_24030 6732b54aefa788327213c508bb8f8b5b 174 PRINTS PR01100 Shikimate kinase family signature 5 20 3.0E-23 T 15-10-2018 AM378_24030 6732b54aefa788327213c508bb8f8b5b 174 Hamap MF_00109 Shikimate kinase [aroK]. 2 169 25.027 T 15-10-2018 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 AM378_24030 6732b54aefa788327213c508bb8f8b5b 174 ProSitePatterns PS01128 Shikimate kinase signature. 58 82 - T 15-10-2018 IPR023000 Shikimate kinase, conserved site KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 AM378_24030 6732b54aefa788327213c508bb8f8b5b 174 Gene3D G3DSA:3.40.50.300 1 169 1.9E-51 T 15-10-2018 AM378_24030 6732b54aefa788327213c508bb8f8b5b 174 SUPERFAMILY SSF52540 4 169 1.27E-26 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_24030 6732b54aefa788327213c508bb8f8b5b 174 Hamap MF_01269 Shikimate kinase 2 [aroL]. 1 173 42.472 T 15-10-2018 IPR027544 Shikimate kinase 2 GO:0004765|GO:0009073 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 AM378_24030 6732b54aefa788327213c508bb8f8b5b 174 Pfam PF01202 Shikimate kinase 11 168 2.2E-46 T 15-10-2018 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 AM378_20285 ed12020eb29f7e94595b6b00c1761772 118 Gene3D G3DSA:2.40.50.660 35 118 7.3E-30 T 15-10-2018 AM378_20285 ed12020eb29f7e94595b6b00c1761772 118 Pfam PF10694 Protein of unknown function (DUF2500) 5 114 1.7E-29 T 15-10-2018 IPR019635 Protein of unknown function DUF2500 AM378_08110 25a5a0c5247ab622a22a70cf6bc9f551 396 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 79 93 - T 15-10-2018 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 AM378_08110 25a5a0c5247ab622a22a70cf6bc9f551 396 Gene3D G3DSA:3.40.50.1100 9 204 1.5E-183 T 15-10-2018 AM378_08110 25a5a0c5247ab622a22a70cf6bc9f551 396 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 51 373 5.4E-51 T 15-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme AM378_08110 25a5a0c5247ab622a22a70cf6bc9f551 396 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 1 390 49.882 T 15-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 AM378_08110 25a5a0c5247ab622a22a70cf6bc9f551 396 PIRSF PIRSF001413 1 396 8.5E-172 T 15-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 AM378_08110 25a5a0c5247ab622a22a70cf6bc9f551 396 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 7 388 8.6E-191 T 15-10-2018 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 AM378_08110 25a5a0c5247ab622a22a70cf6bc9f551 396 Gene3D G3DSA:3.40.50.1100 53 383 1.5E-183 T 15-10-2018 AM378_08110 25a5a0c5247ab622a22a70cf6bc9f551 396 SUPERFAMILY SSF53686 4 389 4.06E-144 T 15-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme AM378_22420 883fe6178d3823e0428ac92d5613f84e 639 Gene3D G3DSA:1.10.1240.20 397 466 2.6E-27 T 15-10-2018 IPR037061 Lytic transglycosylase, superhelical linker domain superfamily GO:0004553|GO:0042597 AM378_22420 883fe6178d3823e0428ac92d5613f84e 639 SUPERFAMILY SSF48435 23 471 1.09E-134 T 15-10-2018 IPR008939 Lytic transglycosylase, superhelical U-shaped GO:0004553|GO:0042597 AM378_22420 883fe6178d3823e0428ac92d5613f84e 639 SUPERFAMILY SSF53955 473 632 3.85E-50 T 15-10-2018 IPR023346 Lysozyme-like domain superfamily AM378_22420 883fe6178d3823e0428ac92d5613f84e 639 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 495 523 - T 15-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 AM378_22420 883fe6178d3823e0428ac92d5613f84e 639 Pfam PF01464 Transglycosylase SLT domain 478 588 7.8E-33 T 15-10-2018 IPR008258 Transglycosylase SLT domain 1 AM378_22420 883fe6178d3823e0428ac92d5613f84e 639 Gene3D G3DSA:1.25.20.10 23 384 3.0E-118 T 15-10-2018 AM378_22420 883fe6178d3823e0428ac92d5613f84e 639 Pfam PF14718 Soluble lytic murein transglycosylase L domain 404 466 1.0E-23 T 15-10-2018 IPR012289 Lytic transglycosylase, superhelical linker GO:0004553|GO:0042597 AM378_22420 883fe6178d3823e0428ac92d5613f84e 639 Gene3D G3DSA:1.10.530.10 467 639 5.7E-53 T 15-10-2018 AM378_18680 085ae9ce50ae9540a24038d051af8d4c 298 Pfam PF02219 Methylenetetrahydrofolate reductase 17 291 2.0E-108 T 15-10-2018 IPR003171 Methylenetetrahydrofolate reductase GO:0004489|GO:0006555|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 AM378_18680 085ae9ce50ae9540a24038d051af8d4c 298 SUPERFAMILY SSF51730 22 293 2.35E-97 T 15-10-2018 IPR029041 FAD-linked oxidoreductase-like AM378_18680 085ae9ce50ae9540a24038d051af8d4c 298 Gene3D G3DSA:3.20.20.220 1 298 1.6E-119 T 15-10-2018 AM378_18680 085ae9ce50ae9540a24038d051af8d4c 298 TIGRFAM TIGR00676 fadh2: methylenetetrahydrofolate reductase [NAD(P)H] 25 290 2.1E-104 T 15-10-2018 IPR004620 5,10-methylenetetrahydrofolate reductase GO:0004489|GO:0005829|GO:0009086|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841 AM378_18340 910bd3ae850cc6feeb1ffa1a8ca1bd3e 328 Pfam PF13407 Periplasmic binding protein domain 31 288 3.1E-53 T 15-10-2018 IPR025997 Periplasmic binding protein AM378_18340 910bd3ae850cc6feeb1ffa1a8ca1bd3e 328 SUPERFAMILY SSF53822 28 326 5.65E-64 T 15-10-2018 IPR028082 Periplasmic binding protein-like I AM378_18340 910bd3ae850cc6feeb1ffa1a8ca1bd3e 328 Gene3D G3DSA:3.40.50.2300 130 267 3.7E-94 T 15-10-2018 AM378_18340 910bd3ae850cc6feeb1ffa1a8ca1bd3e 328 Gene3D G3DSA:3.40.50.2300 31 300 3.7E-94 T 15-10-2018 AM378_20950 e51f3b42ff388a4a1dcc4adc7eb4c2ca 119 Hamap MF_00709 Fumarate reductase subunit D [frdD]. 2 119 27.049 T 15-10-2018 IPR003418 Fumarate reductase, subunit D GO:0006106|GO:0016020 AM378_20950 e51f3b42ff388a4a1dcc4adc7eb4c2ca 119 Gene3D G3DSA:1.20.1300.10 1 119 7.5E-52 T 15-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AM378_20950 e51f3b42ff388a4a1dcc4adc7eb4c2ca 119 PIRSF PIRSF000179 1 119 1.1E-51 T 15-10-2018 IPR003418 Fumarate reductase, subunit D GO:0006106|GO:0016020 AM378_20950 e51f3b42ff388a4a1dcc4adc7eb4c2ca 119 ProDom PD015693 FUMARATE MEMBRANE REDUCTASE D SUBUNIT INNER TRANSMEMBRANE HYDROPHOBIC REDUCTASE POLYPEPTIDE 4 119 7.0E-33 T 15-10-2018 IPR003418 Fumarate reductase, subunit D GO:0006106|GO:0016020 AM378_20950 e51f3b42ff388a4a1dcc4adc7eb4c2ca 119 SUPERFAMILY SSF81343 1 119 1.31E-52 T 15-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AM378_20950 e51f3b42ff388a4a1dcc4adc7eb4c2ca 119 Pfam PF02313 Fumarate reductase subunit D 6 116 1.9E-50 T 15-10-2018 IPR003418 Fumarate reductase, subunit D GO:0006106|GO:0016020 AM378_14860 de5a6715bf5ac41b34366201255c09e5 299 Gene3D G3DSA:1.10.443.10 111 293 3.7E-79 T 15-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 AM378_14860 de5a6715bf5ac41b34366201255c09e5 299 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 7 299 58.438 T 15-10-2018 IPR023009 Tyrosine recombinase XerC/XerD AM378_14860 de5a6715bf5ac41b34366201255c09e5 299 Hamap MF_01807 Tyrosine recombinase XerD [xerD]. 5 299 64.147 T 15-10-2018 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 AM378_14860 de5a6715bf5ac41b34366201255c09e5 299 Pfam PF00589 Phage integrase family 114 285 1.2E-55 T 15-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AM378_14860 de5a6715bf5ac41b34366201255c09e5 299 SUPERFAMILY SSF56349 107 297 5.0E-59 T 15-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AM378_14860 de5a6715bf5ac41b34366201255c09e5 299 Gene3D G3DSA:1.10.150.130 4 101 4.2E-21 T 15-10-2018 IPR010998 Integrase/recombinase, N-terminal AM378_14860 de5a6715bf5ac41b34366201255c09e5 299 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 9 91 5.6E-24 T 15-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 AM378_14860 de5a6715bf5ac41b34366201255c09e5 299 SUPERFAMILY SSF47823 5 101 2.35E-36 T 15-10-2018 AM378_14860 de5a6715bf5ac41b34366201255c09e5 299 TIGRFAM TIGR02225 recomb_XerD: tyrosine recombinase XerD 10 299 1.6E-118 T 15-10-2018 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 AM378_19385 03415124f9b81891fc73f45f3c355902 188 Pfam PF03358 NADPH-dependent FMN reductase 7 149 9.8E-40 T 15-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 AM378_19385 03415124f9b81891fc73f45f3c355902 188 Gene3D G3DSA:3.40.50.360 3 188 3.5E-62 T 15-10-2018 IPR029039 Flavoprotein-like superfamily AM378_19385 03415124f9b81891fc73f45f3c355902 188 SUPERFAMILY SSF52218 7 180 1.27E-45 T 15-10-2018 IPR029039 Flavoprotein-like superfamily AM378_07630 4b1c107ced2fd43c6a45ce5f7949aef2 870 Pfam PF11739 Dicarboxylate transport 658 859 7.1E-66 T 15-10-2018 IPR021730 Dicarboxylate transport AM378_04450 ea5462c5286a6c4d3f3ea473740c2358 434 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 115 133 4.1E-15 T 15-10-2018 AM378_04450 ea5462c5286a6c4d3f3ea473740c2358 434 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 295 317 4.1E-15 T 15-10-2018 AM378_04450 ea5462c5286a6c4d3f3ea473740c2358 434 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 4.1E-15 T 15-10-2018 AM378_04450 ea5462c5286a6c4d3f3ea473740c2358 434 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 172 190 4.1E-15 T 15-10-2018 AM378_04450 ea5462c5286a6c4d3f3ea473740c2358 434 Gene3D G3DSA:3.50.50.100 1 409 1.0E-119 T 15-10-2018 AM378_04450 ea5462c5286a6c4d3f3ea473740c2358 434 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 172 197 1.8E-7 T 15-10-2018 AM378_04450 ea5462c5286a6c4d3f3ea473740c2358 434 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 1.8E-7 T 15-10-2018 AM378_04450 ea5462c5286a6c4d3f3ea473740c2358 434 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 310 317 1.8E-7 T 15-10-2018 AM378_04450 ea5462c5286a6c4d3f3ea473740c2358 434 SUPERFAMILY SSF51905 3 345 4.12E-32 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AM378_04450 ea5462c5286a6c4d3f3ea473740c2358 434 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 6 338 9.6E-65 T 15-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM378_14635 448d4134a59b0f6c32b33931531ced87 257 ProSitePatterns PS00894 DeoR-type HTH domain signature. 8 42 - T 15-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 AM378_14635 448d4134a59b0f6c32b33931531ced87 257 SUPERFAMILY SSF46785 7 67 2.07E-12 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM378_14635 448d4134a59b0f6c32b33931531ced87 257 SMART SM01134 75 236 7.3E-74 T 15-10-2018 AM378_14635 448d4134a59b0f6c32b33931531ced87 257 SUPERFAMILY SSF100950 76 236 2.83E-34 T 15-10-2018 IPR037171 NagB/RpiA transferase-like AM378_14635 448d4134a59b0f6c32b33931531ced87 257 Pfam PF08220 DeoR-like helix-turn-helix domain 8 63 5.1E-17 T 15-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AM378_14635 448d4134a59b0f6c32b33931531ced87 257 SMART SM00420 8 60 3.3E-16 T 15-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AM378_14635 448d4134a59b0f6c32b33931531ced87 257 Pfam PF00455 DeoR C terminal sensor domain 77 235 2.0E-52 T 15-10-2018 IPR014036 DeoR C-terminal sensor domain AM378_14635 448d4134a59b0f6c32b33931531ced87 257 Gene3D G3DSA:1.10.10.10 1 57 1.7E-7 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_13525 81bff96add4a2bab9a7e08b7caf5723a 1296 TIGRFAM TIGR01735 FGAM_synt: phosphoribosylformylglycinamidine synthase 3 1294 0.0 T 15-10-2018 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AM378_13525 81bff96add4a2bab9a7e08b7caf5723a 1296 SUPERFAMILY SSF56042 430 614 3.14E-53 T 15-10-2018 IPR036676 PurM-like, C-terminal domain superfamily AM378_13525 81bff96add4a2bab9a7e08b7caf5723a 1296 SUPERFAMILY SSF56042 822 1034 1.64E-58 T 15-10-2018 IPR036676 PurM-like, C-terminal domain superfamily AM378_13525 81bff96add4a2bab9a7e08b7caf5723a 1296 SUPERFAMILY SSF82697 1 151 4.45E-53 T 15-10-2018 IPR036604 Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AM378_13525 81bff96add4a2bab9a7e08b7caf5723a 1296 Gene3D G3DSA:3.90.650.10 807 981 4.0E-30 T 15-10-2018 IPR036676 PurM-like, C-terminal domain superfamily AM378_13525 81bff96add4a2bab9a7e08b7caf5723a 1296 Pfam PF02769 AIR synthase related protein, C-terminal domain 834 967 1.5E-13 T 15-10-2018 IPR010918 PurM-like, C-terminal domain AM378_13525 81bff96add4a2bab9a7e08b7caf5723a 1296 Pfam PF02769 AIR synthase related protein, C-terminal domain 431 587 1.6E-27 T 15-10-2018 IPR010918 PurM-like, C-terminal domain AM378_13525 81bff96add4a2bab9a7e08b7caf5723a 1296 Pfam PF13507 CobB/CobQ-like glutamine amidotransferase domain 1040 1293 3.2E-105 T 15-10-2018 AM378_13525 81bff96add4a2bab9a7e08b7caf5723a 1296 SUPERFAMILY SSF52317 1036 1294 3.82E-99 T 15-10-2018 IPR029062 Class I glutamine amidotransferase-like AM378_13525 81bff96add4a2bab9a7e08b7caf5723a 1296 Hamap MF_00419 Phosphoribosylformylglycinamidine synthase [purL]. 1 1296 21.725 T 15-10-2018 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AM378_13525 81bff96add4a2bab9a7e08b7caf5723a 1296 Gene3D G3DSA:3.90.650.10 419 605 6.1E-59 T 15-10-2018 IPR036676 PurM-like, C-terminal domain superfamily AM378_13525 81bff96add4a2bab9a7e08b7caf5723a 1296 SMART SM01211 1040 1295 7.6E-159 T 15-10-2018 AM378_13525 81bff96add4a2bab9a7e08b7caf5723a 1296 SUPERFAMILY SSF109736 154 219 1.01E-21 T 15-10-2018 AM378_13525 81bff96add4a2bab9a7e08b7caf5723a 1296 Gene3D G3DSA:3.30.1330.10 613 806 3.2E-24 T 15-10-2018 IPR036921 PurM-like, N-terminal domain superfamily AM378_13525 81bff96add4a2bab9a7e08b7caf5723a 1296 Gene3D G3DSA:3.40.50.880 982 1296 8.2E-142 T 15-10-2018 IPR029062 Class I glutamine amidotransferase-like AM378_13525 81bff96add4a2bab9a7e08b7caf5723a 1296 SUPERFAMILY SSF55326 220 427 1.46E-65 T 15-10-2018 IPR036921 PurM-like, N-terminal domain superfamily AM378_13525 81bff96add4a2bab9a7e08b7caf5723a 1296 SUPERFAMILY SSF55326 618 815 4.45E-68 T 15-10-2018 IPR036921 PurM-like, N-terminal domain superfamily AM378_13525 81bff96add4a2bab9a7e08b7caf5723a 1296 Gene3D G3DSA:3.30.1330.10 213 418 2.8E-43 T 15-10-2018 IPR036921 PurM-like, N-terminal domain superfamily AM378_13525 81bff96add4a2bab9a7e08b7caf5723a 1296 Gene3D G3DSA:1.10.8.750 152 212 5.3E-28 T 15-10-2018 AM378_04645 a0853e1973edcb25cedcba5cc4472572 254 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 249 1.3E-65 T 15-10-2018 AM378_04645 a0853e1973edcb25cedcba5cc4472572 254 SUPERFAMILY SSF51735 5 251 3.76E-76 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily AM378_04645 a0853e1973edcb25cedcba5cc4472572 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 9.4E-38 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_04645 a0853e1973edcb25cedcba5cc4472572 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 157 176 9.4E-38 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_04645 a0853e1973edcb25cedcba5cc4472572 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 178 195 9.4E-38 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_04645 a0853e1973edcb25cedcba5cc4472572 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 213 233 9.4E-38 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_04645 a0853e1973edcb25cedcba5cc4472572 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 9.4E-38 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_04645 a0853e1973edcb25cedcba5cc4472572 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 9.4E-38 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_04645 a0853e1973edcb25cedcba5cc4472572 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 157 176 1.4E-6 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_04645 a0853e1973edcb25cedcba5cc4472572 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 1.4E-6 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_04645 a0853e1973edcb25cedcba5cc4472572 254 Gene3D G3DSA:3.40.50.720 2 254 2.8E-76 T 15-10-2018 AM378_02980 a9456eb89bca137aca5b634cdfe5262e 340 Pfam PF14226 non-haem dioxygenase in morphine synthesis N-terminal 10 133 5.0E-36 T 15-10-2018 IPR026992 Non-haem dioxygenase N-terminal domain AM378_02980 a9456eb89bca137aca5b634cdfe5262e 340 SUPERFAMILY SSF51197 6 287 1.92E-80 T 15-10-2018 AM378_02980 a9456eb89bca137aca5b634cdfe5262e 340 Gene3D G3DSA:2.60.120.330 2 307 6.4E-83 T 15-10-2018 IPR027443 Isopenicillin N synthase-like AM378_02980 a9456eb89bca137aca5b634cdfe5262e 340 PRINTS PR00682 Isopenicillin N synthase signature 32 49 6.4E-12 T 15-10-2018 AM378_02980 a9456eb89bca137aca5b634cdfe5262e 340 PRINTS PR00682 Isopenicillin N synthase signature 239 265 6.4E-12 T 15-10-2018 AM378_02980 a9456eb89bca137aca5b634cdfe5262e 340 PRINTS PR00682 Isopenicillin N synthase signature 203 224 6.4E-12 T 15-10-2018 AM378_02980 a9456eb89bca137aca5b634cdfe5262e 340 Pfam PF03171 2OG-Fe(II) oxygenase superfamily 182 278 3.2E-18 T 15-10-2018 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 AM378_10160 5d74b1f352ba5983e042528108665a39 143 SUPERFAMILY SSF52833 3 138 1.08E-37 T 15-10-2018 IPR036249 Thioredoxin-like superfamily AM378_10160 5d74b1f352ba5983e042528108665a39 143 Gene3D G3DSA:3.40.30.10 1 141 4.0E-58 T 15-10-2018 AM378_10160 5d74b1f352ba5983e042528108665a39 143 Pfam PF03960 ArsC family 7 115 4.9E-18 T 15-10-2018 IPR006660 Arsenate reductase-like AM378_10160 5d74b1f352ba5983e042528108665a39 143 TIGRFAM TIGR00014 arsC: arsenate reductase (glutaredoxin) 4 116 3.1E-39 T 15-10-2018 IPR006659 Arsenate reductase GO:0008794|GO:0055114 MetaCyc: PWY-4202|MetaCyc: PWY-4621 AM378_08095 bfc02cae2fe822b58f8b51563e2f08e0 193 SUPERFAMILY SSF52317 3 191 3.91E-46 T 15-10-2018 IPR029062 Class I glutamine amidotransferase-like AM378_08095 bfc02cae2fe822b58f8b51563e2f08e0 193 PRINTS PR00096 Glutamine amidotransferase superfamily signature 79 90 2.7E-14 T 15-10-2018 AM378_08095 bfc02cae2fe822b58f8b51563e2f08e0 193 PRINTS PR00096 Glutamine amidotransferase superfamily signature 166 179 2.7E-14 T 15-10-2018 AM378_08095 bfc02cae2fe822b58f8b51563e2f08e0 193 PRINTS PR00096 Glutamine amidotransferase superfamily signature 52 61 2.7E-14 T 15-10-2018 AM378_08095 bfc02cae2fe822b58f8b51563e2f08e0 193 Pfam PF00117 Glutamine amidotransferase class-I 6 186 6.8E-44 T 15-10-2018 IPR017926 Glutamine amidotransferase AM378_08095 bfc02cae2fe822b58f8b51563e2f08e0 193 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 49 63 2.7E-6 T 15-10-2018 AM378_08095 bfc02cae2fe822b58f8b51563e2f08e0 193 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 79 95 2.7E-6 T 15-10-2018 AM378_08095 bfc02cae2fe822b58f8b51563e2f08e0 193 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 4 186 1.1E-54 T 15-10-2018 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AM378_08095 bfc02cae2fe822b58f8b51563e2f08e0 193 PRINTS PR00097 Anthranilate synthase component II signature 4 18 4.4E-36 T 15-10-2018 AM378_08095 bfc02cae2fe822b58f8b51563e2f08e0 193 PRINTS PR00097 Anthranilate synthase component II signature 166 179 4.4E-36 T 15-10-2018 AM378_08095 bfc02cae2fe822b58f8b51563e2f08e0 193 PRINTS PR00097 Anthranilate synthase component II signature 124 136 4.4E-36 T 15-10-2018 AM378_08095 bfc02cae2fe822b58f8b51563e2f08e0 193 PRINTS PR00097 Anthranilate synthase component II signature 104 112 4.4E-36 T 15-10-2018 AM378_08095 bfc02cae2fe822b58f8b51563e2f08e0 193 PRINTS PR00097 Anthranilate synthase component II signature 79 90 4.4E-36 T 15-10-2018 AM378_08095 bfc02cae2fe822b58f8b51563e2f08e0 193 PRINTS PR00097 Anthranilate synthase component II signature 52 61 4.4E-36 T 15-10-2018 AM378_08095 bfc02cae2fe822b58f8b51563e2f08e0 193 Gene3D G3DSA:3.40.50.880 1 193 8.1E-60 T 15-10-2018 IPR029062 Class I glutamine amidotransferase-like AM378_12105 6853d572e7fba42d45702044a809dcec 673 Gene3D G3DSA:3.30.9.10 353 575 7.7E-142 T 15-10-2018 AM378_12105 6853d572e7fba42d45702044a809dcec 673 SUPERFAMILY SSF51905 267 667 3.21E-31 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AM378_12105 6853d572e7fba42d45702044a809dcec 673 Gene3D G3DSA:3.40.50.150 9 253 1.0E-112 T 15-10-2018 AM378_12105 6853d572e7fba42d45702044a809dcec 673 SUPERFAMILY SSF54373 481 564 3.53E-5 T 15-10-2018 AM378_12105 6853d572e7fba42d45702044a809dcec 673 Gene3D G3DSA:3.50.50.60 268 667 7.7E-142 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AM378_12105 6853d572e7fba42d45702044a809dcec 673 Pfam PF05430 S-adenosyl-L-methionine-dependent methyltransferase 119 243 2.6E-47 T 15-10-2018 IPR008471 MnmC-like methyltransferase GO:0016645|GO:0055114 MetaCyc: PWY-7892 AM378_12105 6853d572e7fba42d45702044a809dcec 673 Pfam PF01266 FAD dependent oxidoreductase 268 640 6.7E-47 T 15-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 AM378_12105 6853d572e7fba42d45702044a809dcec 673 TIGRFAM TIGR03197 MnmC_Cterm: tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain 268 670 7.3E-155 T 15-10-2018 IPR017610 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal GO:0008168|GO:0016645|GO:0055114 MetaCyc: PWY-7892 AM378_12105 6853d572e7fba42d45702044a809dcec 673 Hamap MF_01102 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC [mnmC]. 7 665 28.717 T 15-10-2018 IPR023032 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC GO:0004808|GO:0008033|GO:0008168|GO:0016645|GO:0055114 MetaCyc: PWY-7892 AM378_04335 5347c44e2aa09842a9560828c503239e 317 Gene3D G3DSA:3.40.47.10 1 317 1.7E-126 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 AM378_04335 5347c44e2aa09842a9560828c503239e 317 SUPERFAMILY SSF53901 4 317 4.14E-71 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 AM378_04335 5347c44e2aa09842a9560828c503239e 317 TIGRFAM TIGR00747 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 1 317 1.5E-147 T 15-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 AM378_04335 5347c44e2aa09842a9560828c503239e 317 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 228 316 1.9E-36 T 15-10-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 AM378_04335 5347c44e2aa09842a9560828c503239e 317 Hamap MF_01815 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 1 317 70.674 T 15-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 AM378_04335 5347c44e2aa09842a9560828c503239e 317 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 106 183 2.0E-31 T 15-10-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 AM378_12360 10dcd558b0453d050c10ac3451545010 409 Gene3D G3DSA:1.20.1250.20 210 408 8.5E-22 T 15-10-2018 AM378_12360 10dcd558b0453d050c10ac3451545010 409 Gene3D G3DSA:1.20.1250.20 1 185 2.4E-18 T 15-10-2018 AM378_12360 10dcd558b0453d050c10ac3451545010 409 SUPERFAMILY SSF103473 1 389 3.66E-44 T 15-10-2018 IPR036259 MFS transporter superfamily AM378_12360 10dcd558b0453d050c10ac3451545010 409 Pfam PF07690 Major Facilitator Superfamily 219 398 6.0E-17 T 15-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM378_07415 f6dfe9aa70f26b0dab77449289280936 383 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 260 278 4.4E-6 T 15-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 AM378_07415 f6dfe9aa70f26b0dab77449289280936 383 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 29 45 4.4E-6 T 15-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 AM378_07415 f6dfe9aa70f26b0dab77449289280936 383 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 94 104 4.4E-6 T 15-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 AM378_07415 f6dfe9aa70f26b0dab77449289280936 383 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 336 351 4.4E-6 T 15-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 AM378_07415 f6dfe9aa70f26b0dab77449289280936 383 Pfam PF13458 Periplasmic binding protein 28 370 1.8E-62 T 15-10-2018 IPR028081 Leucine-binding protein domain AM378_07415 f6dfe9aa70f26b0dab77449289280936 383 SUPERFAMILY SSF53822 27 373 3.26E-88 T 15-10-2018 IPR028082 Periplasmic binding protein-like I AM378_07415 f6dfe9aa70f26b0dab77449289280936 383 Gene3D G3DSA:3.40.50.2300 150 278 1.5E-96 T 15-10-2018 AM378_07415 f6dfe9aa70f26b0dab77449289280936 383 Gene3D G3DSA:3.40.50.2300 31 352 1.5E-96 T 15-10-2018 AM378_12990 22089fff70557e8d2789581284851577 555 Gene3D G3DSA:3.10.20.310 66 148 5.2E-12 T 15-10-2018 AM378_12990 22089fff70557e8d2789581284851577 555 Gene3D G3DSA:2.40.160.50 178 555 2.9E-86 T 15-10-2018 AM378_12990 22089fff70557e8d2789581284851577 555 Pfam PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB 207 516 1.5E-89 T 15-10-2018 IPR005565 Haemolysin activator HlyB, C-terminal AM378_12990 22089fff70557e8d2789581284851577 555 Pfam PF17287 POTRA domain 149 201 9.3E-22 T 15-10-2018 IPR035251 ShlB, POTRA domain AM378_12990 22089fff70557e8d2789581284851577 555 PIRSF PIRSF029745 9 555 3.0E-138 T 15-10-2018 IPR027282 Two partner secretion pathway transporter GO:0015031 AM378_12990 22089fff70557e8d2789581284851577 555 Pfam PF08479 POTRA domain, ShlB-type 74 148 1.0E-21 T 15-10-2018 IPR013686 Polypeptide-transport-associated, ShlB-type AM378_17450 3891b7ca1d3c218b79aba8efafd1addf 166 Gene3D G3DSA:3.30.230.10 74 166 9.9E-38 T 15-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AM378_17450 3891b7ca1d3c218b79aba8efafd1addf 166 Hamap MF_01307_B 30S ribosomal protein S5 [rpsE]. 1 163 34.576 T 15-10-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 AM378_17450 3891b7ca1d3c218b79aba8efafd1addf 166 TIGRFAM TIGR01021 rpsE_bact: ribosomal protein uS5 10 162 4.1E-71 T 15-10-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 AM378_17450 3891b7ca1d3c218b79aba8efafd1addf 166 Pfam PF03719 Ribosomal protein S5, C-terminal domain 87 157 1.3E-30 T 15-10-2018 IPR005324 Ribosomal protein S5, C-terminal GO:0003735|GO:0005840|GO:0006412 AM378_17450 3891b7ca1d3c218b79aba8efafd1addf 166 ProSitePatterns PS00585 Ribosomal protein S5 signature. 28 60 - T 15-10-2018 IPR018192 Ribosomal protein S5, N-terminal, conserved site AM378_17450 3891b7ca1d3c218b79aba8efafd1addf 166 SUPERFAMILY SSF54768 9 75 7.32E-24 T 15-10-2018 AM378_17450 3891b7ca1d3c218b79aba8efafd1addf 166 Gene3D G3DSA:3.30.160.20 1 73 6.4E-34 T 15-10-2018 AM378_17450 3891b7ca1d3c218b79aba8efafd1addf 166 Pfam PF00333 Ribosomal protein S5, N-terminal domain 11 74 2.3E-29 T 15-10-2018 IPR013810 Ribosomal protein S5, N-terminal GO:0003723|GO:0003735|GO:0005840|GO:0006412 AM378_17450 3891b7ca1d3c218b79aba8efafd1addf 166 SUPERFAMILY SSF54211 79 159 1.72E-27 T 15-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AM378_17485 085432ff5f62d9b40e7465024b6fef37 123 SMART SM01374 1 123 3.9E-86 T 15-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 AM378_17485 085432ff5f62d9b40e7465024b6fef37 123 Pfam PF00238 Ribosomal protein L14p/L23e 1 123 6.9E-55 T 15-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 AM378_17485 085432ff5f62d9b40e7465024b6fef37 123 TIGRFAM TIGR01067 rplN_bact: ribosomal protein uL14 1 123 4.4E-60 T 15-10-2018 IPR005745 Ribosomal protein L14P, bacterial-type GO:0003735|GO:0006412|GO:0015934 AM378_17485 085432ff5f62d9b40e7465024b6fef37 123 SUPERFAMILY SSF50193 2 122 1.57E-51 T 15-10-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 AM378_17485 085432ff5f62d9b40e7465024b6fef37 123 Hamap MF_01367 50S ribosomal protein L14 [rplN]. 1 123 27.609 T 15-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 AM378_17485 085432ff5f62d9b40e7465024b6fef37 123 ProSitePatterns PS00049 Ribosomal protein L14 signature. 60 86 - T 15-10-2018 IPR019972 Ribosomal protein L14P, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM378_17485 085432ff5f62d9b40e7465024b6fef37 123 Gene3D G3DSA:2.40.150.20 1 123 2.8E-57 T 15-10-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 AM378_04960 8b9f0c2c9aaf45145d122aa6c7e4a2f4 373 Gene3D G3DSA:2.60.120.650 2 204 1.8E-87 T 15-10-2018 AM378_04960 8b9f0c2c9aaf45145d122aa6c7e4a2f4 373 SUPERFAMILY SSF51197 7 290 3.02E-75 T 15-10-2018 AM378_04960 8b9f0c2c9aaf45145d122aa6c7e4a2f4 373 SMART SM00558 92 215 6.7E-10 T 15-10-2018 IPR003347 JmjC domain AM378_04960 8b9f0c2c9aaf45145d122aa6c7e4a2f4 373 Pfam PF08007 Cupin superfamily protein 9 309 1.5E-101 T 15-10-2018 IPR003347 JmjC domain AM378_04960 8b9f0c2c9aaf45145d122aa6c7e4a2f4 373 Gene3D G3DSA:1.10.10.2510 205 373 2.3E-61 T 15-10-2018 AM378_06860 259f3e630e69b22b0b993861f5ae2569 349 SUPERFAMILY SSF51556 7 347 9.52E-89 T 15-10-2018 IPR032466 Metal-dependent hydrolase AM378_06860 259f3e630e69b22b0b993861f5ae2569 349 ProSitePatterns PS00869 Renal dipeptidase active site. 129 151 - T 15-10-2018 IPR000180 Membrane dipeptidase, active site GO:0006508|GO:0008235|GO:0008239|GO:0016805 MetaCyc: PWY-7533|Reactome: R-HSA-2142691|Reactome: R-HSA-5423646 AM378_06860 259f3e630e69b22b0b993861f5ae2569 349 Pfam PF01244 Membrane dipeptidase (Peptidase family M19) 8 344 1.2E-97 T 15-10-2018 IPR008257 Peptidase M19 GO:0006508|GO:0016805 MetaCyc: PWY-7533|Reactome: R-HSA-2142691|Reactome: R-HSA-5423646 AM378_06860 259f3e630e69b22b0b993861f5ae2569 349 Gene3D G3DSA:3.20.20.140 3 349 2.9E-114 T 15-10-2018 AM378_14960 f42e6e8b9d2b76875bfbe270e75e26a2 272 SUPERFAMILY SSF100950 88 244 2.2E-29 T 15-10-2018 IPR037171 NagB/RpiA transferase-like AM378_14960 f42e6e8b9d2b76875bfbe270e75e26a2 272 SUPERFAMILY SSF46785 5 69 6.92E-12 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM378_14960 f42e6e8b9d2b76875bfbe270e75e26a2 272 SMART SM01134 84 244 2.2E-64 T 15-10-2018 AM378_14960 f42e6e8b9d2b76875bfbe270e75e26a2 272 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 15-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 AM378_14960 f42e6e8b9d2b76875bfbe270e75e26a2 272 Pfam PF00455 DeoR C terminal sensor domain 87 243 1.7E-50 T 15-10-2018 IPR014036 DeoR C-terminal sensor domain AM378_14960 f42e6e8b9d2b76875bfbe270e75e26a2 272 SMART SM00420 6 58 1.1E-13 T 15-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AM378_14960 f42e6e8b9d2b76875bfbe270e75e26a2 272 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 2.9E-8 T 15-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AM378_14960 f42e6e8b9d2b76875bfbe270e75e26a2 272 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 2.9E-8 T 15-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AM378_14960 f42e6e8b9d2b76875bfbe270e75e26a2 272 Pfam PF08220 DeoR-like helix-turn-helix domain 6 60 1.1E-15 T 15-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AM378_12405 015eb8dc78d175a7a391dc1a38956406 411 Hamap MF_00221 Divalent metal cation transporter MntH [mntH]. 3 410 37.099 T 15-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 AM378_12405 015eb8dc78d175a7a391dc1a38956406 411 TIGRFAM TIGR01197 nramp: metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 21 378 3.0E-97 T 15-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 AM378_12405 015eb8dc78d175a7a391dc1a38956406 411 PRINTS PR00447 Natural resistance-associated macrophage protein signature 98 124 1.2E-29 T 15-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 AM378_12405 015eb8dc78d175a7a391dc1a38956406 411 PRINTS PR00447 Natural resistance-associated macrophage protein signature 201 224 1.2E-29 T 15-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 AM378_12405 015eb8dc78d175a7a391dc1a38956406 411 PRINTS PR00447 Natural resistance-associated macrophage protein signature 300 319 1.2E-29 T 15-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 AM378_12405 015eb8dc78d175a7a391dc1a38956406 411 PRINTS PR00447 Natural resistance-associated macrophage protein signature 126 145 1.2E-29 T 15-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 AM378_12405 015eb8dc78d175a7a391dc1a38956406 411 PRINTS PR00447 Natural resistance-associated macrophage protein signature 151 172 1.2E-29 T 15-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 AM378_12405 015eb8dc78d175a7a391dc1a38956406 411 Pfam PF01566 Natural resistance-associated macrophage protein 39 384 1.3E-121 T 15-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 AM378_22915 d4e8007998f1fb86c822cdd15bbc91d3 399 ProSitePatterns PS00874 Bacterial type II secretion system protein F signature. 159 187 - T 15-10-2018 IPR001992 Type II secretion system conserved site GO:0009306|GO:0016020 AM378_22915 d4e8007998f1fb86c822cdd15bbc91d3 399 Gene3D G3DSA:1.20.81.30 54 168 1.0E-28 T 15-10-2018 AM378_22915 d4e8007998f1fb86c822cdd15bbc91d3 399 Pfam PF00482 Type II secretion system (T2SS), protein F 270 390 2.5E-26 T 15-10-2018 IPR018076 Type II secretion system F domain AM378_22915 d4e8007998f1fb86c822cdd15bbc91d3 399 Pfam PF00482 Type II secretion system (T2SS), protein F 64 187 5.9E-30 T 15-10-2018 IPR018076 Type II secretion system F domain AM378_22915 d4e8007998f1fb86c822cdd15bbc91d3 399 Gene3D G3DSA:1.20.81.30 251 361 7.0E-23 T 15-10-2018 AM378_22915 d4e8007998f1fb86c822cdd15bbc91d3 399 PRINTS PR00812 Bacterial general secretion pathway protein F signature 159 187 4.5E-16 T 15-10-2018 IPR003004 GspF/PilC family AM378_22915 d4e8007998f1fb86c822cdd15bbc91d3 399 PRINTS PR00812 Bacterial general secretion pathway protein F signature 60 72 4.5E-16 T 15-10-2018 IPR003004 GspF/PilC family AM378_22915 d4e8007998f1fb86c822cdd15bbc91d3 399 PRINTS PR00812 Bacterial general secretion pathway protein F signature 379 398 4.5E-16 T 15-10-2018 IPR003004 GspF/PilC family AM378_22915 d4e8007998f1fb86c822cdd15bbc91d3 399 PRINTS PR00812 Bacterial general secretion pathway protein F signature 363 377 4.5E-16 T 15-10-2018 IPR003004 GspF/PilC family AM378_12270 b17922d5c4c54f0021fdfd09c9497d94 307 SUPERFAMILY SSF103481 46 143 3.27E-11 T 15-10-2018 AM378_12270 b17922d5c4c54f0021fdfd09c9497d94 307 Pfam PF00892 EamA-like transporter family 13 143 1.6E-13 T 15-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AM378_12270 b17922d5c4c54f0021fdfd09c9497d94 307 Pfam PF00892 EamA-like transporter family 157 292 1.7E-18 T 15-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AM378_12270 b17922d5c4c54f0021fdfd09c9497d94 307 SUPERFAMILY SSF103481 194 292 3.53E-12 T 15-10-2018 AM378_13620 958ef3cf609f21e61c72e402bcdd8fec 319 Pfam PF17188 MucB/RseB C-terminal domain 220 312 9.8E-27 T 15-10-2018 IPR033436 MucB/RseB, C-terminal AM378_13620 958ef3cf609f21e61c72e402bcdd8fec 319 Pfam PF03888 MucB/RseB N-terminal domain 29 197 2.4E-60 T 15-10-2018 IPR033434 MucB/RseB, N-terminal AM378_13620 958ef3cf609f21e61c72e402bcdd8fec 319 Gene3D G3DSA:3.30.200.100 219 317 2.4E-29 T 15-10-2018 IPR038484 MucB/RseB, C-terminal domain superfamily AM378_13620 958ef3cf609f21e61c72e402bcdd8fec 319 PIRSF PIRSF005427 2 319 4.7E-89 T 15-10-2018 IPR005588 MucB/RseB AM378_13620 958ef3cf609f21e61c72e402bcdd8fec 319 Gene3D G3DSA:2.50.20.10 26 210 5.2E-55 T 15-10-2018 AM378_06535 60ba2b85a3f2c305089207232fc07440 333 SUPERFAMILY SSF53474 28 331 1.98E-60 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold AM378_06535 60ba2b85a3f2c305089207232fc07440 333 Pfam PF00561 alpha/beta hydrolase fold 70 199 1.7E-19 T 15-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AM378_06535 60ba2b85a3f2c305089207232fc07440 333 Gene3D G3DSA:3.40.50.1820 21 332 2.6E-95 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold AM378_06535 60ba2b85a3f2c305089207232fc07440 333 PRINTS PR00412 Epoxide hydrolase signature 73 91 3.1E-8 T 15-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AM378_06535 60ba2b85a3f2c305089207232fc07440 333 PRINTS PR00412 Epoxide hydrolase signature 93 108 3.1E-8 T 15-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AM378_06535 60ba2b85a3f2c305089207232fc07440 333 PRINTS PR00412 Epoxide hydrolase signature 138 151 3.1E-8 T 15-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AM378_06535 60ba2b85a3f2c305089207232fc07440 333 PRINTS PR00412 Epoxide hydrolase signature 308 330 3.1E-8 T 15-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AM378_06535 60ba2b85a3f2c305089207232fc07440 333 PRINTS PR00412 Epoxide hydrolase signature 152 165 3.1E-8 T 15-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AM378_06535 60ba2b85a3f2c305089207232fc07440 333 PRINTS PR00111 Alpha/beta hydrolase fold signature 152 165 3.7E-10 T 15-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AM378_06535 60ba2b85a3f2c305089207232fc07440 333 PRINTS PR00111 Alpha/beta hydrolase fold signature 93 108 3.7E-10 T 15-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AM378_06535 60ba2b85a3f2c305089207232fc07440 333 PRINTS PR00111 Alpha/beta hydrolase fold signature 138 151 3.7E-10 T 15-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AM378_03725 4331b6548e38109546f24f9426ae7519 711 Pfam PF12805 FUSC-like inner membrane protein yccS 68 347 7.3E-111 T 15-10-2018 IPR032692 Integral membrane protein YccS, N-terminal AM378_03725 4331b6548e38109546f24f9426ae7519 711 TIGRFAM TIGR01666 YCCS: TIGR01666 family membrane protein 10 706 0.0 T 15-10-2018 IPR010019 Integral membrane protein, YccS AM378_03725 4331b6548e38109546f24f9426ae7519 711 Pfam PF13515 Fusaric acid resistance protein-like 407 526 6.4E-23 T 15-10-2018 AM378_03725 4331b6548e38109546f24f9426ae7519 711 TIGRFAM TIGR01667 YCCS_YHJK: integral membrane protein, YccS/YhfK family 10 706 2.3E-289 T 15-10-2018 IPR010020 Integral membrane protein, YccS/YhfK AM378_16915 711f08b1db6bb5abcfb6e646c106fa19 481 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 36 432 8.7E-109 T 15-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 AM378_16915 711f08b1db6bb5abcfb6e646c106fa19 481 ProSitePatterns PS00456 Sodium:solute symporter family signature 1. 155 180 - T 15-10-2018 IPR018212 Sodium/solute symporter, conserved site AM378_16915 711f08b1db6bb5abcfb6e646c106fa19 481 Gene3D G3DSA:1.20.1730.10 26 478 7.0E-83 T 15-10-2018 IPR038377 Sodium/glucose symporter superfamily AM378_16915 711f08b1db6bb5abcfb6e646c106fa19 481 Pfam PF00474 Sodium:solute symporter family 36 432 7.1E-132 T 15-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 AM378_16915 711f08b1db6bb5abcfb6e646c106fa19 481 TIGRFAM TIGR02119 panF: sodium/pantothenate symporter 4 472 6.2E-234 T 15-10-2018 IPR011849 Sodium/pantothenate symporter GO:0015081|GO:0015233|GO:0015887|GO:0016021|GO:0036376 AM378_16925 9a3cc262ebaa78c3304f1fedbcba8281 334 Gene3D G3DSA:1.10.1200.80 253 326 1.3E-7 T 15-10-2018 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal GO:0016491|GO:0055114 AM378_16925 9a3cc262ebaa78c3304f1fedbcba8281 334 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 94 112 - T 15-10-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 AM378_16925 9a3cc262ebaa78c3304f1fedbcba8281 334 Pfam PF01207 Dihydrouridine synthase (Dus) 14 318 5.4E-115 T 15-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 AM378_16925 9a3cc262ebaa78c3304f1fedbcba8281 334 SUPERFAMILY SSF51395 11 319 2.93E-88 T 15-10-2018 AM378_16925 9a3cc262ebaa78c3304f1fedbcba8281 334 Gene3D G3DSA:3.20.20.70 7 248 3.7E-75 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM378_16925 9a3cc262ebaa78c3304f1fedbcba8281 334 Hamap MF_02042 tRNA-dihydrouridine synthase B [dusB]. 1 321 49.129 T 15-10-2018 IPR032887 tRNA-dihydrouridine synthase B GO:0002943|GO:0017150 AM378_16925 9a3cc262ebaa78c3304f1fedbcba8281 334 PIRSF PIRSF006621 1 328 5.4E-102 T 15-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 AM378_16925 9a3cc262ebaa78c3304f1fedbcba8281 334 TIGRFAM TIGR00737 nifR3_yhdG: putative TIM-barrel protein, nifR3 family 3 319 1.7E-135 T 15-10-2018 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 GO:0008033|GO:0016491|GO:0050660|GO:0055114 AM378_09640 583457184d8e78366947b529beffb928 334 Pfam PF02154 Flagellar motor switch protein FliM 37 230 8.6E-74 T 15-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 AM378_09640 583457184d8e78366947b529beffb928 334 TIGRFAM TIGR01397 fliM_switch: flagellar motor switch protein FliM 4 320 8.8E-111 T 15-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 AM378_09640 583457184d8e78366947b529beffb928 334 SUPERFAMILY SSF103039 48 230 1.23E-19 T 15-10-2018 IPR028976 CheC-like superfamily AM378_09640 583457184d8e78366947b529beffb928 334 PRINTS PR00955 Flagellar motor switch protein FliM signature 113 132 9.0E-31 T 15-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 AM378_09640 583457184d8e78366947b529beffb928 334 PRINTS PR00955 Flagellar motor switch protein FliM signature 88 104 9.0E-31 T 15-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 AM378_09640 583457184d8e78366947b529beffb928 334 PRINTS PR00955 Flagellar motor switch protein FliM signature 212 230 9.0E-31 T 15-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 AM378_09640 583457184d8e78366947b529beffb928 334 PRINTS PR00955 Flagellar motor switch protein FliM signature 3 16 9.0E-31 T 15-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 AM378_09640 583457184d8e78366947b529beffb928 334 SUPERFAMILY SSF101801 249 322 4.84E-12 T 15-10-2018 IPR036429 SpoA-like superfamily AM378_09640 583457184d8e78366947b529beffb928 334 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 252 320 5.4E-15 T 15-10-2018 IPR001543 Surface presentation of antigen (SpoA) AM378_09640 583457184d8e78366947b529beffb928 334 Gene3D G3DSA:3.40.1550.10 43 232 1.4E-56 T 15-10-2018 IPR028976 CheC-like superfamily AM378_09640 583457184d8e78366947b529beffb928 334 PIRSF PIRSF002888 2 330 5.1E-95 T 15-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 AM378_13475 e402ed640564b963dfde8a7388b409e6 384 SUPERFAMILY SSF53850 36 358 1.04E-57 T 15-10-2018 AM378_13475 e402ed640564b963dfde8a7388b409e6 384 Pfam PF13416 Bacterial extracellular solute-binding protein 59 329 5.0E-28 T 15-10-2018 IPR006059 Bacterial extracellular solute-binding protein AM378_13475 e402ed640564b963dfde8a7388b409e6 384 Gene3D G3DSA:3.40.190.10 148 286 6.7E-59 T 15-10-2018 AM378_13475 e402ed640564b963dfde8a7388b409e6 384 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 139 155 1.3E-6 T 15-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AM378_13475 e402ed640564b963dfde8a7388b409e6 384 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 65 86 1.3E-6 T 15-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AM378_13475 e402ed640564b963dfde8a7388b409e6 384 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 279 298 1.3E-6 T 15-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AM378_13475 e402ed640564b963dfde8a7388b409e6 384 Gene3D G3DSA:3.40.190.10 42 330 6.7E-59 T 15-10-2018 AM378_13460 04b2139bf561e570d0e40291de27f1e3 268 Gene3D G3DSA:1.10.3720.10 17 262 4.7E-44 T 15-10-2018 IPR035906 MetI-like superfamily AM378_13460 04b2139bf561e570d0e40291de27f1e3 268 SUPERFAMILY SSF161098 8 256 1.44E-46 T 15-10-2018 IPR035906 MetI-like superfamily AM378_13460 04b2139bf561e570d0e40291de27f1e3 268 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 80 248 3.8E-14 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AM378_22000 b9068bab3b84ef61c391bc658ca2d6df 216 Pfam PF01618 MotA/TolQ/ExbB proton channel family 75 183 1.1E-25 T 15-10-2018 IPR002898 MotA/TolQ/ExbB proton channel AM378_05070 843e84ecb680d41d0e54e960048c99e5 371 Pfam PF01594 AI-2E family transporter 11 339 2.6E-50 T 15-10-2018 IPR002549 Transmembrane protein TqsA-like AM378_00970 6e78aa55c280c80b7dc21972a8739e9e 218 Gene3D G3DSA:2.40.100.10 87 217 4.8E-56 T 15-10-2018 IPR029000 Cyclophilin-like domain superfamily AM378_00970 6e78aa55c280c80b7dc21972a8739e9e 218 TIGRFAM TIGR00370 TIGR00370: sensor histidine kinase inhibitor, KipI family 9 211 4.2E-87 T 15-10-2018 IPR010016 KipI family KEGG: 00480+3.5.2.9|MetaCyc: PWY-4041|MetaCyc: PWY-7942 AM378_00970 6e78aa55c280c80b7dc21972a8739e9e 218 SMART SM00796 4 202 2.6E-98 T 15-10-2018 IPR003833 Carboxyltransferase domain, subdomain C and D AM378_00970 6e78aa55c280c80b7dc21972a8739e9e 218 Pfam PF02682 Carboxyltransferase domain, subdomain C and D 5 202 1.0E-71 T 15-10-2018 IPR003833 Carboxyltransferase domain, subdomain C and D AM378_00970 6e78aa55c280c80b7dc21972a8739e9e 218 Gene3D G3DSA:3.30.1360.40 7 80 9.3E-6 T 15-10-2018 AM378_00970 6e78aa55c280c80b7dc21972a8739e9e 218 SUPERFAMILY SSF50891 88 214 1.37E-44 T 15-10-2018 IPR029000 Cyclophilin-like domain superfamily AM378_00970 6e78aa55c280c80b7dc21972a8739e9e 218 SUPERFAMILY SSF160467 5 93 1.24E-11 T 15-10-2018 AM378_11080 bf59e225561dd071edb172f230e382ab 86 Gene3D G3DSA:1.10.1200.10 7 84 2.6E-13 T 15-10-2018 IPR036736 ACP-like superfamily AM378_11080 bf59e225561dd071edb172f230e382ab 86 SUPERFAMILY SSF47336 3 82 4.45E-15 T 15-10-2018 IPR036736 ACP-like superfamily AM378_11080 bf59e225561dd071edb172f230e382ab 86 Pfam PF00550 Phosphopantetheine attachment site 10 75 3.7E-11 T 15-10-2018 IPR009081 Phosphopantetheine binding ACP domain AM378_11080 bf59e225561dd071edb172f230e382ab 86 ProSitePatterns PS00012 Phosphopantetheine attachment site. 34 49 - T 15-10-2018 IPR006162 Phosphopantetheine attachment site AM378_16640 5d8b9d6b479c2ac60a739554c88914db 192 PIRSF PIRSF028513 1 187 9.3E-41 T 15-10-2018 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 AM378_16640 5d8b9d6b479c2ac60a739554c88914db 192 Gene3D G3DSA:2.60.450.10 60 192 1.4E-51 T 15-10-2018 AM378_16640 5d8b9d6b479c2ac60a739554c88914db 192 Hamap MF_01915 Lipopolysaccharide export system protein LptC [lptC]. 4 186 27.312 T 15-10-2018 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 AM378_16640 5d8b9d6b479c2ac60a739554c88914db 192 TIGRFAM TIGR04409 LptC_YrbK: LPS export ABC transporter periplasmic protein LptC 7 183 1.5E-56 T 15-10-2018 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 AM378_16640 5d8b9d6b479c2ac60a739554c88914db 192 Pfam PF06835 Lipopolysaccharide-assembly, LptC-related 14 184 4.8E-54 T 15-10-2018 IPR010664 Lipopolysaccharide assembly, LptC-related AM378_08615 79eb233eb3c817671ae340ebf8bee1d4 109 Gene3D G3DSA:1.10.3730.20 8 109 1.6E-27 T 15-10-2018 AM378_08615 79eb233eb3c817671ae340ebf8bee1d4 109 Pfam PF00893 Small Multidrug Resistance protein 10 99 1.9E-27 T 15-10-2018 IPR000390 Small multidrug resistance protein family GO:0016021 AM378_08615 79eb233eb3c817671ae340ebf8bee1d4 109 Hamap MF_01597 Spermidine export protein MdtI [mdtI]. 1 109 30.2 T 15-10-2018 IPR023737 Spermidine export protein MdtI GO:0005886|GO:0015606|GO:0015848 AM378_08615 79eb233eb3c817671ae340ebf8bee1d4 109 SUPERFAMILY SSF103481 11 108 1.2E-17 T 15-10-2018 AM378_07500 d26afc3666dbf71bcf1c370f6053326e 573 Pfam PF01553 Acyltransferase 68 192 2.1E-12 T 15-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 AM378_07500 d26afc3666dbf71bcf1c370f6053326e 573 Pfam PF13444 Acetyltransferase (GNAT) domain 322 422 5.1E-23 T 15-10-2018 AM378_07500 d26afc3666dbf71bcf1c370f6053326e 573 Gene3D G3DSA:3.40.630.30 305 467 3.9E-6 T 15-10-2018 AM378_07500 d26afc3666dbf71bcf1c370f6053326e 573 SMART SM00563 77 194 2.5E-4 T 15-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 AM378_07500 d26afc3666dbf71bcf1c370f6053326e 573 SUPERFAMILY SSF55729 305 464 2.47E-24 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase AM378_07500 d26afc3666dbf71bcf1c370f6053326e 573 SUPERFAMILY SSF69593 51 259 1.31E-16 T 15-10-2018 AM378_17425 8c2d9e4eaed98d452796b826d9640a2d 118 PIRSF PIRSF002134 1 118 4.3E-43 T 15-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM378_17425 8c2d9e4eaed98d452796b826d9640a2d 118 SUPERFAMILY SSF46946 2 114 2.35E-46 T 15-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 AM378_17425 8c2d9e4eaed98d452796b826d9640a2d 118 TIGRFAM TIGR03631 uS13_bact: ribosomal protein uS13 3 114 1.5E-53 T 15-10-2018 IPR019980 Ribosomal protein S13, bacterial-type GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM378_17425 8c2d9e4eaed98d452796b826d9640a2d 118 Gene3D G3DSA:4.10.910.10 72 118 2.4E-26 T 15-10-2018 IPR027437 30s ribosomal protein S13, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM378_17425 8c2d9e4eaed98d452796b826d9640a2d 118 ProSitePatterns PS00646 Ribosomal protein S13 signature. 87 100 - T 15-10-2018 IPR018269 Ribosomal protein S13, conserved site GO:0003723|GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM378_17425 8c2d9e4eaed98d452796b826d9640a2d 118 Gene3D G3DSA:1.10.8.50 1 71 1.0E-27 T 15-10-2018 AM378_17425 8c2d9e4eaed98d452796b826d9640a2d 118 Pfam PF00416 Ribosomal protein S13/S18 3 108 1.2E-33 T 15-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM378_17425 8c2d9e4eaed98d452796b826d9640a2d 118 Hamap MF_01315 30S ribosomal protein S13 [rpsM]. 1 118 27.588 T 15-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM378_18910 e5a1ee1195b4ef8603137741b70a151b 325 Gene3D G3DSA:3.90.550.10 1 245 9.9E-43 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AM378_18910 e5a1ee1195b4ef8603137741b70a151b 325 Pfam PF00535 Glycosyl transferase family 2 9 128 1.3E-28 T 15-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 AM378_18910 e5a1ee1195b4ef8603137741b70a151b 325 SUPERFAMILY SSF53448 6 238 1.69E-46 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AM378_03185 09c4d5fb93b30c23b3d1fb7deb26867f 562 Gene3D G3DSA:3.30.70.1450 223 286 1.4E-9 T 15-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 AM378_03185 09c4d5fb93b30c23b3d1fb7deb26867f 562 Pfam PF06826 Predicted Permease Membrane Region 385 554 1.9E-41 T 15-10-2018 IPR006512 YidE/YbjL duplication AM378_03185 09c4d5fb93b30c23b3d1fb7deb26867f 562 Pfam PF06826 Predicted Permease Membrane Region 17 181 8.6E-38 T 15-10-2018 IPR006512 YidE/YbjL duplication AM378_03185 09c4d5fb93b30c23b3d1fb7deb26867f 562 SUPERFAMILY SSF116726 291 374 1.18E-10 T 15-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 AM378_03185 09c4d5fb93b30c23b3d1fb7deb26867f 562 Pfam PF02080 TrkA-C domain 305 372 1.3E-8 T 15-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AM378_03185 09c4d5fb93b30c23b3d1fb7deb26867f 562 Pfam PF02080 TrkA-C domain 227 281 4.5E-9 T 15-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AM378_03185 09c4d5fb93b30c23b3d1fb7deb26867f 562 SUPERFAMILY SSF116726 227 282 1.44E-10 T 15-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 AM378_03185 09c4d5fb93b30c23b3d1fb7deb26867f 562 Gene3D G3DSA:3.30.70.1450 299 373 3.5E-6 T 15-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 AM378_03185 09c4d5fb93b30c23b3d1fb7deb26867f 562 Hamap MF_01015 Putative transport protein YbjL [ybjL]. 1 557 58.029 T 15-10-2018 IPR023017 Transport protein YbjL, putative AM378_03185 09c4d5fb93b30c23b3d1fb7deb26867f 562 TIGRFAM TIGR01625 YidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain 391 541 3.2E-45 T 15-10-2018 IPR006512 YidE/YbjL duplication AM378_03185 09c4d5fb93b30c23b3d1fb7deb26867f 562 TIGRFAM TIGR01625 YidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain 21 169 3.7E-38 T 15-10-2018 IPR006512 YidE/YbjL duplication AM378_05075 5d8590ded7e2363c3fa591d061288087 403 SUPERFAMILY SSF103473 6 400 1.31E-48 T 15-10-2018 IPR036259 MFS transporter superfamily AM378_05075 5d8590ded7e2363c3fa591d061288087 403 Pfam PF07690 Major Facilitator Superfamily 26 337 1.7E-31 T 15-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM378_05075 5d8590ded7e2363c3fa591d061288087 403 Gene3D G3DSA:1.20.1250.20 208 402 1.7E-16 T 15-10-2018 AM378_05075 5d8590ded7e2363c3fa591d061288087 403 Gene3D G3DSA:1.20.1250.20 15 204 1.5E-23 T 15-10-2018 AM378_02775 724a2c756a3678785e8e3e2e1804b442 354 Gene3D G3DSA:3.40.50.2000 183 348 1.4E-31 T 15-10-2018 AM378_02775 724a2c756a3678785e8e3e2e1804b442 354 SUPERFAMILY SSF53756 13 354 1.44E-61 T 15-10-2018 AM378_02775 724a2c756a3678785e8e3e2e1804b442 354 Gene3D G3DSA:3.40.50.2000 1 182 1.7E-19 T 15-10-2018 AM378_02775 724a2c756a3678785e8e3e2e1804b442 354 Pfam PF13439 Glycosyltransferase Family 4 16 174 8.7E-17 T 15-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 AM378_02775 724a2c756a3678785e8e3e2e1804b442 354 Pfam PF00534 Glycosyl transferases group 1 187 316 1.6E-24 T 15-10-2018 IPR001296 Glycosyl transferase, family 1 AM378_20905 1a92d659a65a8724872333e518caf86d 97 SUPERFAMILY SSF50129 1 96 1.49E-31 T 15-10-2018 IPR011032 GroES-like superfamily AM378_20905 1a92d659a65a8724872333e518caf86d 97 ProSitePatterns PS00681 Chaperonins cpn10 signature. 3 27 - T 15-10-2018 IPR018369 Chaperonin GroES, conserved site GO:0005524|GO:0006457 AM378_20905 1a92d659a65a8724872333e518caf86d 97 Pfam PF00166 Chaperonin 10 Kd subunit 3 95 8.2E-30 T 15-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AM378_20905 1a92d659a65a8724872333e518caf86d 97 Hamap MF_00580 10 kDa chaperonin [groS]. 2 96 23.904 T 15-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AM378_20905 1a92d659a65a8724872333e518caf86d 97 SMART SM00883 2 95 2.8E-48 T 15-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AM378_20905 1a92d659a65a8724872333e518caf86d 97 PRINTS PR00297 10kDa chaperonin signature 3 18 1.2E-27 T 15-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AM378_20905 1a92d659a65a8724872333e518caf86d 97 PRINTS PR00297 10kDa chaperonin signature 60 72 1.2E-27 T 15-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AM378_20905 1a92d659a65a8724872333e518caf86d 97 PRINTS PR00297 10kDa chaperonin signature 25 46 1.2E-27 T 15-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AM378_20905 1a92d659a65a8724872333e518caf86d 97 PRINTS PR00297 10kDa chaperonin signature 82 95 1.2E-27 T 15-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AM378_20905 1a92d659a65a8724872333e518caf86d 97 Gene3D G3DSA:2.30.33.40 1 97 1.3E-36 T 15-10-2018 IPR037124 GroES chaperonin superfamily GO:0005737|GO:0006457 AM378_16515 6038bfc03fe9c02e5cb8cd758e89f9f6 235 SUPERFAMILY SSF48317 37 231 5.63E-36 T 15-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily AM378_16515 6038bfc03fe9c02e5cb8cd758e89f9f6 235 PIRSF PIRSF000897 2 235 2.4E-54 T 15-10-2018 IPR001011 Acid phosphatase, class A, bacterial GO:0003993|GO:0030288 KEGG: 00730+3.1.3.2|KEGG: 00740+3.1.3.2|MetaCyc: PWY-6348 AM378_16515 6038bfc03fe9c02e5cb8cd758e89f9f6 235 Gene3D G3DSA:1.20.144.10 16 234 1.2E-58 T 15-10-2018 AM378_16515 6038bfc03fe9c02e5cb8cd758e89f9f6 235 SMART SM00014 106 213 2.1E-6 T 15-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AM378_16515 6038bfc03fe9c02e5cb8cd758e89f9f6 235 Pfam PF01569 PAP2 superfamily 122 214 1.3E-14 T 15-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AM378_02475 9500c6643f885bddaae7dd6be55f1d21 235 Gene3D G3DSA:3.40.30.10 7 231 5.9E-113 T 15-10-2018 AM378_02475 9500c6643f885bddaae7dd6be55f1d21 235 Pfam PF02798 Glutathione S-transferase, N-terminal domain 21 99 5.4E-13 T 15-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AM378_02475 9500c6643f885bddaae7dd6be55f1d21 235 SUPERFAMILY SSF47616 102 230 2.23E-33 T 15-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily AM378_02475 9500c6643f885bddaae7dd6be55f1d21 235 SUPERFAMILY SSF52833 12 102 1.05E-23 T 15-10-2018 IPR036249 Thioredoxin-like superfamily AM378_02475 9500c6643f885bddaae7dd6be55f1d21 235 Pfam PF00043 Glutathione S-transferase, C-terminal domain 136 222 5.3E-9 T 15-10-2018 IPR004046 Glutathione S-transferase, C-terminal AM378_02475 9500c6643f885bddaae7dd6be55f1d21 235 Gene3D G3DSA:1.20.1050.10 106 221 5.9E-113 T 15-10-2018 AM378_13100 d9a01b5afeec689fc223d02683844c7d 238 Gene3D G3DSA:1.10.10.10 138 234 1.1E-33 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_13100 d9a01b5afeec689fc223d02683844c7d 238 SUPERFAMILY SSF52172 7 182 3.52E-38 T 15-10-2018 IPR011006 CheY-like superfamily AM378_13100 d9a01b5afeec689fc223d02683844c7d 238 Pfam PF00072 Response regulator receiver domain 10 118 4.2E-25 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM378_13100 d9a01b5afeec689fc223d02683844c7d 238 SMART SM00862 151 227 4.6E-26 T 15-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AM378_13100 d9a01b5afeec689fc223d02683844c7d 238 SMART SM00448 8 118 9.4E-38 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM378_13100 d9a01b5afeec689fc223d02683844c7d 238 Gene3D G3DSA:3.40.50.2300 2 137 7.0E-34 T 15-10-2018 AM378_13100 d9a01b5afeec689fc223d02683844c7d 238 Pfam PF00486 Transcriptional regulatory protein, C terminal 152 226 3.9E-23 T 15-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AM378_02935 01ea82ccf88c818152feaee08aa272a1 309 SUPERFAMILY SSF46785 8 93 2.26E-18 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM378_02935 01ea82ccf88c818152feaee08aa272a1 309 Gene3D G3DSA:1.10.10.10 6 89 5.9E-19 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_02935 01ea82ccf88c818152feaee08aa272a1 309 Pfam PF03466 LysR substrate binding domain 96 293 1.9E-23 T 15-10-2018 IPR005119 LysR, substrate-binding AM378_02935 01ea82ccf88c818152feaee08aa272a1 309 Gene3D G3DSA:3.40.190.290 92 298 3.8E-17 T 15-10-2018 AM378_02935 01ea82ccf88c818152feaee08aa272a1 309 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 69 1.5E-15 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_02935 01ea82ccf88c818152feaee08aa272a1 309 SUPERFAMILY SSF53850 110 295 1.72E-24 T 15-10-2018 AM378_17860 9aac2d13242ef8b5da9fed83cc5c9d0a 184 ProSitePatterns PS00893 Nudix box signature. 80 101 - T 15-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 AM378_17860 9aac2d13242ef8b5da9fed83cc5c9d0a 184 Gene3D G3DSA:3.90.79.10 8 183 4.9E-45 T 15-10-2018 AM378_17860 9aac2d13242ef8b5da9fed83cc5c9d0a 184 SUPERFAMILY SSF55811 2 178 6.91E-37 T 15-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 AM378_17860 9aac2d13242ef8b5da9fed83cc5c9d0a 184 Pfam PF00293 NUDIX domain 47 140 2.3E-13 T 15-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 AM378_19155 039d182eaeffc18f468c29bed32094f7 89 ProDom PD029038 YIHD CYTOPLASMIC ENZYME Y3814 GLYCOGEN YPO0013A HI0845 DIRECT ORF1 UNCHARACTERIZED 1 87 2.0E-38 T 15-10-2018 IPR009383 Protein of unknown function DUF1040 AM378_19155 039d182eaeffc18f468c29bed32094f7 89 Gene3D G3DSA:1.10.1580.20 1 89 3.0E-45 T 15-10-2018 IPR038134 YihD-like superfamily AM378_19155 039d182eaeffc18f468c29bed32094f7 89 Pfam PF06288 Protein of unknown function (DUF1040) 1 86 1.1E-45 T 15-10-2018 IPR009383 Protein of unknown function DUF1040 AM378_00190 e77bcbd950ccde3892c075d166193edc 237 SUPERFAMILY SSF52540 2 205 1.31E-45 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_00190 e77bcbd950ccde3892c075d166193edc 237 Pfam PF00005 ABC transporter 20 158 3.0E-22 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM378_00190 e77bcbd950ccde3892c075d166193edc 237 Gene3D G3DSA:3.40.50.300 1 232 3.0E-49 T 15-10-2018 AM378_00190 e77bcbd950ccde3892c075d166193edc 237 SMART SM00382 26 207 9.0E-14 T 15-10-2018 IPR003593 AAA+ ATPase domain AM378_00190 e77bcbd950ccde3892c075d166193edc 237 ProSitePatterns PS00211 ABC transporters family signature. 131 145 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM378_02010 2073e342dfc8b6f38d8de54aebfadce6 118 Pfam PF06519 TolA C-terminal 41 111 1.6E-10 T 15-10-2018 IPR014161 Tol-Pal system, TolA GO:0005215|GO:0016021|GO:0043213 AM378_02010 2073e342dfc8b6f38d8de54aebfadce6 118 Gene3D G3DSA:3.30.1150.10 33 118 3.6E-16 T 15-10-2018 AM378_02010 2073e342dfc8b6f38d8de54aebfadce6 118 SUPERFAMILY SSF74653 36 118 2.75E-14 T 15-10-2018 AM378_22800 dec9c2b8d8f47d77c596204ef479eeef 313 Gene3D G3DSA:3.40.50.150 10 310 3.2E-108 T 15-10-2018 AM378_22800 dec9c2b8d8f47d77c596204ef479eeef 313 Hamap MF_01007 Ribosomal RNA small subunit methyltransferase H [rsmH]. 7 311 38.579 T 15-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 AM378_22800 dec9c2b8d8f47d77c596204ef479eeef 313 PIRSF PIRSF004486 1 312 2.6E-100 T 15-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 AM378_22800 dec9c2b8d8f47d77c596204ef479eeef 313 SUPERFAMILY SSF53335 7 311 3.85E-45 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM378_22800 dec9c2b8d8f47d77c596204ef479eeef 313 SUPERFAMILY SSF81799 114 213 2.88E-34 T 15-10-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 AM378_22800 dec9c2b8d8f47d77c596204ef479eeef 313 Pfam PF01795 MraW methylase family 5 310 4.9E-118 T 15-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 AM378_22800 dec9c2b8d8f47d77c596204ef479eeef 313 TIGRFAM TIGR00006 TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase 1 310 5.7E-127 T 15-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 AM378_22800 dec9c2b8d8f47d77c596204ef479eeef 313 Gene3D G3DSA:1.10.150.170 112 214 3.2E-108 T 15-10-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 AM378_22145 f4265aac3c145ac2eb80cbde7bad77c2 267 Gene3D G3DSA:3.90.850.10 1 267 8.1E-82 T 15-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 AM378_22145 f4265aac3c145ac2eb80cbde7bad77c2 267 SUPERFAMILY SSF56529 2 267 3.21E-78 T 15-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 AM378_22145 f4265aac3c145ac2eb80cbde7bad77c2 267 TIGRFAM TIGR02312 HpaH: 2-oxo-hepta-3-ene-1,7-dioic acid hydratase 1 267 3.6E-141 T 15-10-2018 IPR012690 2-oxo-hepta-4-ene-1,7-dioic acid hydratase GO:0018817|GO:0019439 AM378_22145 f4265aac3c145ac2eb80cbde7bad77c2 267 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 91 265 6.9E-6 T 15-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 AM378_01180 5735a13dce50349a04f711a3d4bc3206 350 SUPERFAMILY SSF51569 7 348 1.78E-137 T 15-10-2018 AM378_01180 5735a13dce50349a04f711a3d4bc3206 350 Pfam PF00793 DAHP synthetase I family 39 338 3.2E-107 T 15-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 AM378_01180 5735a13dce50349a04f711a3d4bc3206 350 PIRSF PIRSF001361 1 350 2.4E-163 T 15-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 AM378_01180 5735a13dce50349a04f711a3d4bc3206 350 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 6 349 2.4E-175 T 15-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 AM378_01180 5735a13dce50349a04f711a3d4bc3206 350 Gene3D G3DSA:3.20.20.70 1 350 7.5E-171 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM378_13355 539af9d1f809f5496582d61efb192899 276 Pfam PF14581 SseB protein C-terminal domain 149 259 3.2E-36 T 15-10-2018 IPR027945 SseB protein, C-terminal AM378_13355 539af9d1f809f5496582d61efb192899 276 Pfam PF07179 SseB protein N-terminal domain 15 133 1.3E-28 T 15-10-2018 IPR009839 SseB protein N-terminal domain AM378_00625 5d5a23353b554d103f0891541f53a005 396 SUPERFAMILY SSF103473 5 393 9.68E-66 T 15-10-2018 IPR036259 MFS transporter superfamily AM378_00625 5d5a23353b554d103f0891541f53a005 396 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 9 390 2.1E-89 T 15-10-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0006855|GO:0015238|GO:0016021 AM378_00625 5d5a23353b554d103f0891541f53a005 396 Gene3D G3DSA:1.20.1720.10 13 389 4.7E-99 T 15-10-2018 AM378_00625 5d5a23353b554d103f0891541f53a005 396 PRINTS PR01035 Tetracycline resistance protein signature 22 38 5.8E-7 T 15-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AM378_00625 5d5a23353b554d103f0891541f53a005 396 PRINTS PR01035 Tetracycline resistance protein signature 106 127 5.8E-7 T 15-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AM378_00625 5d5a23353b554d103f0891541f53a005 396 PRINTS PR01035 Tetracycline resistance protein signature 279 300 5.8E-7 T 15-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AM378_00625 5d5a23353b554d103f0891541f53a005 396 Pfam PF07690 Major Facilitator Superfamily 18 359 7.4E-45 T 15-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM378_22670 2ef22534f6eff74590fccfc7c63a01f1 216 Gene3D G3DSA:3.30.2350.10 3 215 1.5E-70 T 15-10-2018 AM378_22670 2ef22534f6eff74590fccfc7c63a01f1 216 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 57 71 - T 15-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM378_22670 2ef22534f6eff74590fccfc7c63a01f1 216 SUPERFAMILY SSF55120 6 213 1.3E-61 T 15-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM378_22670 2ef22534f6eff74590fccfc7c63a01f1 216 Pfam PF00849 RNA pseudouridylate synthase 19 166 5.3E-27 T 15-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM378_05145 ce3b25985922c19db45851e497ab9f4f 498 Gene3D G3DSA:3.40.605.10 10 274 5.7E-100 T 15-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 AM378_05145 ce3b25985922c19db45851e497ab9f4f 498 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 295 306 - T 15-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 AM378_05145 ce3b25985922c19db45851e497ab9f4f 498 Gene3D G3DSA:3.40.309.10 275 497 7.2E-78 T 15-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 AM378_05145 ce3b25985922c19db45851e497ab9f4f 498 Pfam PF00171 Aldehyde dehydrogenase family 33 492 3.9E-170 T 15-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 AM378_05145 ce3b25985922c19db45851e497ab9f4f 498 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 266 273 - T 15-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 AM378_05145 ce3b25985922c19db45851e497ab9f4f 498 SUPERFAMILY SSF53720 5 496 2.36E-167 T 15-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 AM378_04930 63ccb361cb07f8d687ae7eeb847a6bc1 371 SUPERFAMILY SSF50331 243 360 7.94E-7 T 15-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal AM378_04930 63ccb361cb07f8d687ae7eeb847a6bc1 371 TIGRFAM TIGR01187 potA: polyamine ABC transporter, ATP-binding protein 41 365 2.1E-160 T 15-10-2018 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit GO:0015417|GO:0015846|GO:0043190 AM378_04930 63ccb361cb07f8d687ae7eeb847a6bc1 371 SUPERFAMILY SSF52540 10 249 3.96E-86 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_04930 63ccb361cb07f8d687ae7eeb847a6bc1 371 Gene3D G3DSA:3.40.50.300 10 228 1.8E-69 T 15-10-2018 AM378_04930 63ccb361cb07f8d687ae7eeb847a6bc1 371 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM378_04930 63ccb361cb07f8d687ae7eeb847a6bc1 371 Gene3D G3DSA:2.40.50.940 229 291 2.1E-9 T 15-10-2018 AM378_04930 63ccb361cb07f8d687ae7eeb847a6bc1 371 Pfam PF08402 TOBE domain 285 365 7.5E-9 T 15-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 AM378_04930 63ccb361cb07f8d687ae7eeb847a6bc1 371 Pfam PF00005 ABC transporter 28 167 2.9E-34 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM378_04930 63ccb361cb07f8d687ae7eeb847a6bc1 371 SMART SM00382 35 218 7.1E-19 T 15-10-2018 IPR003593 AAA+ ATPase domain AM378_16275 d64c3ebf9a12c2769c7bd49f2b5420e6 72 TIGRFAM TIGR02419 C4_traR_proteo: phage/conjugal plasmid C-4 type zinc finger protein, TraR family 3 64 4.4E-20 T 15-10-2018 IPR012783 Zinc finger, C4 DksA/TraR-type AM378_16275 d64c3ebf9a12c2769c7bd49f2b5420e6 72 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 35 64 1.1E-9 T 15-10-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 AM378_16275 d64c3ebf9a12c2769c7bd49f2b5420e6 72 SUPERFAMILY SSF57716 34 70 3.99E-7 T 15-10-2018 AM378_16275 d64c3ebf9a12c2769c7bd49f2b5420e6 72 Gene3D G3DSA:1.20.120.910 2 70 2.8E-17 T 15-10-2018 AM378_07995 67856193ebe6ede855501a44a391623c 310 SUPERFAMILY SSF53822 26 302 3.44E-66 T 15-10-2018 IPR028082 Periplasmic binding protein-like I AM378_07995 67856193ebe6ede855501a44a391623c 310 Pfam PF13407 Periplasmic binding protein domain 27 276 2.1E-48 T 15-10-2018 IPR025997 Periplasmic binding protein AM378_07995 67856193ebe6ede855501a44a391623c 310 Gene3D G3DSA:3.40.50.2300 128 261 2.7E-75 T 15-10-2018 AM378_07995 67856193ebe6ede855501a44a391623c 310 Gene3D G3DSA:3.40.50.2300 34 279 2.7E-75 T 15-10-2018 AM378_18195 53bd5683a1274d9c420992ec35fe8e16 247 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 166 229 1.0E-11 T 15-10-2018 IPR016148 Pili assembly chaperone, C-terminal AM378_18195 53bd5683a1274d9c420992ec35fe8e16 247 SUPERFAMILY SSF49584 150 241 1.7E-19 T 15-10-2018 IPR036316 Pili assembly chaperone, C-terminal domain superfamily AM378_18195 53bd5683a1274d9c420992ec35fe8e16 247 Gene3D G3DSA:2.60.40.10 25 143 2.0E-40 T 15-10-2018 IPR013783 Immunoglobulin-like fold AM378_18195 53bd5683a1274d9c420992ec35fe8e16 247 ProSitePatterns PS00635 Gram-negative pili assembly chaperone signature. 101 118 - T 15-10-2018 IPR018046 Pili assembly chaperone, conserved site AM378_18195 53bd5683a1274d9c420992ec35fe8e16 247 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 26 143 3.2E-36 T 15-10-2018 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 AM378_18195 53bd5683a1274d9c420992ec35fe8e16 247 Gene3D G3DSA:2.60.40.10 145 241 2.6E-20 T 15-10-2018 IPR013783 Immunoglobulin-like fold AM378_18195 53bd5683a1274d9c420992ec35fe8e16 247 SUPERFAMILY SSF49354 26 143 2.62E-37 T 15-10-2018 IPR008962 PapD-like superfamily AM378_18195 53bd5683a1274d9c420992ec35fe8e16 247 PRINTS PR00969 Pili chaperone signature 102 119 1.6E-31 T 15-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM378_18195 53bd5683a1274d9c420992ec35fe8e16 247 PRINTS PR00969 Pili chaperone signature 26 35 1.6E-31 T 15-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM378_18195 53bd5683a1274d9c420992ec35fe8e16 247 PRINTS PR00969 Pili chaperone signature 72 93 1.6E-31 T 15-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM378_18195 53bd5683a1274d9c420992ec35fe8e16 247 PRINTS PR00969 Pili chaperone signature 125 140 1.6E-31 T 15-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM378_18195 53bd5683a1274d9c420992ec35fe8e16 247 PRINTS PR00969 Pili chaperone signature 161 176 1.6E-31 T 15-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM378_00665 0016286edea14b5e7bea03fe0dfe324c 403 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 39 272 2.1E-99 T 15-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 AM378_00665 0016286edea14b5e7bea03fe0dfe324c 403 Gene3D G3DSA:3.40.710.10 30 291 3.6E-90 T 15-10-2018 AM378_00665 0016286edea14b5e7bea03fe0dfe324c 403 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 292 383 8.2E-25 T 15-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AM378_00665 0016286edea14b5e7bea03fe0dfe324c 403 Gene3D G3DSA:2.60.410.10 292 383 1.2E-27 T 15-10-2018 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AM378_00665 0016286edea14b5e7bea03fe0dfe324c 403 SUPERFAMILY SSF69189 292 385 2.35E-25 T 15-10-2018 IPR015956 Penicillin-binding protein, C-terminal domain superfamily GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AM378_00665 0016286edea14b5e7bea03fe0dfe324c 403 SUPERFAMILY SSF56601 9 292 2.14E-77 T 15-10-2018 IPR012338 Beta-lactamase/transpeptidase-like AM378_00665 0016286edea14b5e7bea03fe0dfe324c 403 SMART SM00936 292 383 4.4E-34 T 15-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AM378_00665 0016286edea14b5e7bea03fe0dfe324c 403 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 72 83 1.3E-16 T 15-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 AM378_00665 0016286edea14b5e7bea03fe0dfe324c 403 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 158 171 1.3E-16 T 15-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 AM378_00665 0016286edea14b5e7bea03fe0dfe324c 403 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 131 148 1.3E-16 T 15-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 AM378_01320 d7d538bf3f75b786b57d42dbc7cc7c1e 255 Pfam PF08241 Methyltransferase domain 51 142 1.1E-25 T 15-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 AM378_01320 d7d538bf3f75b786b57d42dbc7cc7c1e 255 Gene3D G3DSA:3.40.50.150 14 200 2.4E-37 T 15-10-2018 AM378_01320 d7d538bf3f75b786b57d42dbc7cc7c1e 255 TIGRFAM TIGR02072 BioC: malonyl-acyl carrier protein O-methyltransferase BioC 16 254 3.7E-66 T 15-10-2018 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC GO:0009102|GO:0010340 KEGG: 00780+2.1.1.197|MetaCyc: PWY-6519 AM378_01320 d7d538bf3f75b786b57d42dbc7cc7c1e 255 Hamap MF_00835 Malonyl-[acyl-carrier protein] O-methyltransferase [bioC]. 8 254 30.912 T 15-10-2018 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC GO:0009102|GO:0010340 KEGG: 00780+2.1.1.197|MetaCyc: PWY-6519 AM378_01320 d7d538bf3f75b786b57d42dbc7cc7c1e 255 SUPERFAMILY SSF53335 14 215 1.69E-41 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM378_11575 e2130e5e599724c1ee2f2d8968951179 155 Pfam PF07080 Protein of unknown function (DUF1348) 8 137 1.7E-63 T 15-10-2018 IPR009783 Protein of unknown function DUF1348 AM378_11575 e2130e5e599724c1ee2f2d8968951179 155 SUPERFAMILY SSF54427 2 155 2.09E-76 T 15-10-2018 IPR032710 NTF2-like domain superfamily AM378_11575 e2130e5e599724c1ee2f2d8968951179 155 Gene3D G3DSA:3.10.450.50 11 155 1.7E-72 T 15-10-2018 AM378_21360 90ae5a0afbec41476a3e15df6699b586 314 TIGRFAM TIGR00431 TruB: tRNA pseudouridine(55) synthase 12 219 5.6E-94 T 15-10-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM378_21360 90ae5a0afbec41476a3e15df6699b586 314 Hamap MF_01080 tRNA pseudouridine synthase B [truB]. 11 309 19.009 T 15-10-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM378_21360 90ae5a0afbec41476a3e15df6699b586 314 Gene3D G3DSA:3.30.2350.10 1 249 2.6E-96 T 15-10-2018 AM378_21360 90ae5a0afbec41476a3e15df6699b586 314 Pfam PF16198 tRNA pseudouridylate synthase B C-terminal domain 181 248 1.2E-22 T 15-10-2018 IPR032819 tRNA pseudouridylate synthase B, C-terminal Reactome: R-HSA-171319|Reactome: R-HSA-6790901 AM378_21360 90ae5a0afbec41476a3e15df6699b586 314 SUPERFAMILY SSF55120 10 248 5.47E-84 T 15-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM378_21360 90ae5a0afbec41476a3e15df6699b586 314 Pfam PF09157 Pseudouridine synthase II TruB, C-terminal 252 309 9.8E-20 T 15-10-2018 IPR015240 tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM378_21360 90ae5a0afbec41476a3e15df6699b586 314 Gene3D G3DSA:2.30.130.10 250 313 1.0E-27 T 15-10-2018 IPR036974 PUA domain superfamily GO:0003723 AM378_21360 90ae5a0afbec41476a3e15df6699b586 314 Pfam PF01509 TruB family pseudouridylate synthase (N terminal domain) 33 180 3.8E-59 T 15-10-2018 IPR002501 Pseudouridine synthase II, N-terminal GO:0006396 AM378_21360 90ae5a0afbec41476a3e15df6699b586 314 SUPERFAMILY SSF88697 251 310 4.22E-14 T 15-10-2018 IPR015947 PUA-like superfamily AM378_10055 4eb778f25f37b4777235733be5b1f82d 291 SUPERFAMILY SSF46689 229 279 5.38E-11 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AM378_10055 4eb778f25f37b4777235733be5b1f82d 291 SUPERFAMILY SSF46689 177 224 1.43E-6 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AM378_10055 4eb778f25f37b4777235733be5b1f82d 291 Pfam PF12833 Helix-turn-helix domain 199 278 2.1E-19 T 15-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM378_10055 4eb778f25f37b4777235733be5b1f82d 291 Pfam PF12852 Cupin 2 162 3.5E-24 T 15-10-2018 IPR032783 AraC-type transcription regulator, ligand-binding domain AM378_10055 4eb778f25f37b4777235733be5b1f82d 291 Gene3D G3DSA:1.10.10.60 178 283 2.9E-25 T 15-10-2018 AM378_10055 4eb778f25f37b4777235733be5b1f82d 291 SUPERFAMILY SSF51182 16 92 1.4E-5 T 15-10-2018 IPR011051 RmlC-like cupin domain superfamily AM378_10055 4eb778f25f37b4777235733be5b1f82d 291 Gene3D G3DSA:2.60.120.10 36 92 3.0E-5 T 15-10-2018 IPR014710 RmlC-like jelly roll fold AM378_10055 4eb778f25f37b4777235733be5b1f82d 291 SMART SM00342 193 276 2.5E-28 T 15-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM378_10055 4eb778f25f37b4777235733be5b1f82d 291 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 230 272 - T 15-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AM378_01355 3ab1670bda5a9e085c0ed99627251f6b 171 Pfam PF00994 Probable molybdopterin binding domain 14 156 1.5E-36 T 15-10-2018 IPR001453 MoaB/Mog domain AM378_01355 3ab1670bda5a9e085c0ed99627251f6b 171 PIRSF PIRSF006443 1 166 1.3E-64 T 15-10-2018 IPR012245 Molybdenum cofactor biosynthesis protein MoaB GO:0006777 AM378_01355 3ab1670bda5a9e085c0ed99627251f6b 171 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 12 152 1.4E-38 T 15-10-2018 IPR001453 MoaB/Mog domain AM378_01355 3ab1670bda5a9e085c0ed99627251f6b 171 Gene3D G3DSA:3.40.980.10 2 171 4.8E-56 T 15-10-2018 IPR036425 MoaB/Mog-like domain superfamily AM378_01355 3ab1670bda5a9e085c0ed99627251f6b 171 SMART SM00852 14 158 1.0E-33 T 15-10-2018 IPR001453 MoaB/Mog domain AM378_01355 3ab1670bda5a9e085c0ed99627251f6b 171 ProSitePatterns PS01078 Molybdenum cofactor biosynthesis proteins signature 1. 72 85 - T 15-10-2018 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 Reactome: R-HSA-947581 AM378_01355 3ab1670bda5a9e085c0ed99627251f6b 171 SUPERFAMILY SSF53218 8 168 1.7E-49 T 15-10-2018 IPR036425 MoaB/Mog-like domain superfamily AM378_01355 3ab1670bda5a9e085c0ed99627251f6b 171 TIGRFAM TIGR02667 moaB_proteo: molybdenum cofactor biosynthesis protein B 7 169 3.4E-84 T 15-10-2018 IPR013484 Molybdenum cofactor biosynthesis protein B, proteobacteria GO:0006777 AM378_13245 2b699b7343d3a1da638c07f2b22f38d9 277 SUPERFAMILY SSF52096 4 252 1.76E-44 T 15-10-2018 IPR029045 ClpP/crotonase-like domain superfamily AM378_13245 2b699b7343d3a1da638c07f2b22f38d9 277 Pfam PF00378 Enoyl-CoA hydratase/isomerase 15 225 2.2E-28 T 15-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 AM378_13245 2b699b7343d3a1da638c07f2b22f38d9 277 Gene3D G3DSA:3.90.226.10 1 277 1.3E-81 T 15-10-2018 AM378_02035 5ee8be9fadf6e9d901bdf62784f40f57 257 Gene3D G3DSA:1.10.3720.10 47 244 1.3E-30 T 15-10-2018 IPR035906 MetI-like superfamily AM378_02035 5ee8be9fadf6e9d901bdf62784f40f57 257 SUPERFAMILY SSF161098 50 238 3.27E-35 T 15-10-2018 IPR035906 MetI-like superfamily AM378_02035 5ee8be9fadf6e9d901bdf62784f40f57 257 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 73 243 1.5E-24 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AM378_17560 db5358fb2a934f797f9cb6253a65cd1b 704 Hamap MF_00054_B Elongation factor G [fusA]. 6 702 113.776 T 15-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AM378_17560 db5358fb2a934f797f9cb6253a65cd1b 704 SMART SM00889 487 609 4.0E-71 T 15-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 AM378_17560 db5358fb2a934f797f9cb6253a65cd1b 704 Gene3D G3DSA:3.40.50.300 1 303 1.9E-116 T 15-10-2018 AM378_17560 db5358fb2a934f797f9cb6253a65cd1b 704 Pfam PF14492 Elongation Factor G, domain II 411 485 1.1E-33 T 15-10-2018 AM378_17560 db5358fb2a934f797f9cb6253a65cd1b 704 SUPERFAMILY SSF54211 486 610 1.31E-39 T 15-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AM378_17560 db5358fb2a934f797f9cb6253a65cd1b 704 SMART SM00838 611 698 1.1E-49 T 15-10-2018 IPR000640 Elongation factor EFG, domain V-like AM378_17560 db5358fb2a934f797f9cb6253a65cd1b 704 Gene3D G3DSA:3.30.70.870 412 490 1.4E-31 T 15-10-2018 AM378_17560 db5358fb2a934f797f9cb6253a65cd1b 704 SUPERFAMILY SSF54980 411 488 3.02E-25 T 15-10-2018 IPR035647 EF-G domain III/V-like AM378_17560 db5358fb2a934f797f9cb6253a65cd1b 704 Pfam PF03144 Elongation factor Tu domain 2 331 398 2.2E-16 T 15-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 AM378_17560 db5358fb2a934f797f9cb6253a65cd1b 704 PRINTS PR00315 GTP-binding elongation factor signature 85 95 1.7E-16 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM378_17560 db5358fb2a934f797f9cb6253a65cd1b 704 PRINTS PR00315 GTP-binding elongation factor signature 137 146 1.7E-16 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM378_17560 db5358fb2a934f797f9cb6253a65cd1b 704 PRINTS PR00315 GTP-binding elongation factor signature 101 112 1.7E-16 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM378_17560 db5358fb2a934f797f9cb6253a65cd1b 704 PRINTS PR00315 GTP-binding elongation factor signature 12 25 1.7E-16 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM378_17560 db5358fb2a934f797f9cb6253a65cd1b 704 PRINTS PR00315 GTP-binding elongation factor signature 58 66 1.7E-16 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM378_17560 db5358fb2a934f797f9cb6253a65cd1b 704 SUPERFAMILY SSF50447 271 411 3.09E-35 T 15-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily AM378_17560 db5358fb2a934f797f9cb6253a65cd1b 704 Pfam PF03764 Elongation factor G, domain IV 486 609 5.4E-44 T 15-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 AM378_17560 db5358fb2a934f797f9cb6253a65cd1b 704 TIGRFAM TIGR00484 EF-G: translation elongation factor G 1 703 0.0 T 15-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AM378_17560 db5358fb2a934f797f9cb6253a65cd1b 704 Gene3D G3DSA:3.30.230.10 491 698 2.1E-83 T 15-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AM378_17560 db5358fb2a934f797f9cb6253a65cd1b 704 SUPERFAMILY SSF52540 6 287 3.81E-106 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_17560 db5358fb2a934f797f9cb6253a65cd1b 704 Gene3D G3DSA:2.40.30.10 304 411 8.8E-45 T 15-10-2018 AM378_17560 db5358fb2a934f797f9cb6253a65cd1b 704 SUPERFAMILY SSF54980 611 700 7.19E-27 T 15-10-2018 IPR035647 EF-G domain III/V-like AM378_17560 db5358fb2a934f797f9cb6253a65cd1b 704 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 15-10-2018 IPR031157 Tr-type G domain, conserved site AM378_17560 db5358fb2a934f797f9cb6253a65cd1b 704 Gene3D G3DSA:3.30.70.240 615 685 2.1E-83 T 15-10-2018 AM378_17560 db5358fb2a934f797f9cb6253a65cd1b 704 Pfam PF00679 Elongation factor G C-terminus 611 696 2.8E-28 T 15-10-2018 IPR000640 Elongation factor EFG, domain V-like AM378_17560 db5358fb2a934f797f9cb6253a65cd1b 704 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 10 187 2.5E-32 T 15-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 AM378_17560 db5358fb2a934f797f9cb6253a65cd1b 704 Pfam PF00009 Elongation factor Tu GTP binding domain 9 287 2.1E-66 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM378_18265 a1a3e46af9a95c8e8cf9350d1f2260c2 279 Pfam PF00892 EamA-like transporter family 4 129 2.0E-12 T 15-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AM378_18265 a1a3e46af9a95c8e8cf9350d1f2260c2 279 Pfam PF00892 EamA-like transporter family 141 271 4.2E-11 T 15-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AM378_18265 a1a3e46af9a95c8e8cf9350d1f2260c2 279 SUPERFAMILY SSF103481 176 277 5.1E-8 T 15-10-2018 AM378_18265 a1a3e46af9a95c8e8cf9350d1f2260c2 279 SUPERFAMILY SSF103481 33 129 3.66E-7 T 15-10-2018 AM378_23905 3cabd981f20a95695d5ab48cea2c0806 196 SUPERFAMILY SSF56925 38 196 1.02E-81 T 15-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel AM378_23905 3cabd981f20a95695d5ab48cea2c0806 196 Hamap MF_00837 Lipid A palmitoyltransferase PagP [pagP]. 3 196 45.039 T 15-10-2018 IPR009746 Antimicrobial peptide resistance/lipid A acylation PagP AM378_23905 3cabd981f20a95695d5ab48cea2c0806 196 Gene3D G3DSA:2.40.160.20 36 196 4.0E-74 T 15-10-2018 AM378_23905 3cabd981f20a95695d5ab48cea2c0806 196 ProDom PD103779 CRCA ANTIMICROBIAL RESISTANCE LIPOPROTEIN RCP A PEPTIDE ACYLATION LIPID EXPORTED 46 184 2.0E-53 T 15-10-2018 IPR009746 Antimicrobial peptide resistance/lipid A acylation PagP AM378_23905 3cabd981f20a95695d5ab48cea2c0806 196 Pfam PF07017 Antimicrobial peptide resistance and lipid A acylation protein PagP 47 193 1.0E-68 T 15-10-2018 IPR009746 Antimicrobial peptide resistance/lipid A acylation PagP AM378_20875 3a1eec828597a2982e4ad7b21fd1406f 191 SUPERFAMILY SSF46689 3 67 7.7E-10 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AM378_20875 3a1eec828597a2982e4ad7b21fd1406f 191 SUPERFAMILY SSF48498 74 158 4.64E-6 T 15-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AM378_20875 3a1eec828597a2982e4ad7b21fd1406f 191 Gene3D G3DSA:1.10.357.10 1 184 1.9E-27 T 15-10-2018 AM378_20875 3a1eec828597a2982e4ad7b21fd1406f 191 Pfam PF00440 Bacterial regulatory proteins, tetR family 7 49 1.9E-5 T 15-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM378_19305 5b973dfae49d8501bba86ef5005b3c3b 460 SMART SM00382 142 327 3.7E-4 T 15-10-2018 IPR003593 AAA+ ATPase domain AM378_19305 5b973dfae49d8501bba86ef5005b3c3b 460 TIGRFAM TIGR01039 atpD: ATP synthase F1, beta subunit 3 460 1.5E-262 T 15-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 AM378_19305 5b973dfae49d8501bba86ef5005b3c3b 460 Gene3D G3DSA:1.10.1140.10 345 460 2.2E-60 T 15-10-2018 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 AM378_19305 5b973dfae49d8501bba86ef5005b3c3b 460 SUPERFAMILY SSF50615 1 75 1.23E-24 T 15-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 AM378_19305 5b973dfae49d8501bba86ef5005b3c3b 460 Hamap MF_01347 ATP synthase subunit beta [atpB]. 1 460 56.932 T 15-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 AM378_19305 5b973dfae49d8501bba86ef5005b3c3b 460 Gene3D G3DSA:2.40.10.170 2 75 2.0E-30 T 15-10-2018 AM378_19305 5b973dfae49d8501bba86ef5005b3c3b 460 SUPERFAMILY SSF47917 345 459 1.46E-55 T 15-10-2018 AM378_19305 5b973dfae49d8501bba86ef5005b3c3b 460 SUPERFAMILY SSF52540 77 348 5.32E-90 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_19305 5b973dfae49d8501bba86ef5005b3c3b 460 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 333 342 - T 15-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 AM378_19305 5b973dfae49d8501bba86ef5005b3c3b 460 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 130 342 5.8E-63 T 15-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 AM378_19305 5b973dfae49d8501bba86ef5005b3c3b 460 Gene3D G3DSA:3.40.50.300 76 344 4.2E-113 T 15-10-2018 AM378_19305 5b973dfae49d8501bba86ef5005b3c3b 460 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 6 71 5.5E-20 T 15-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 AM378_11765 35fd8aadc968a08adb975d7e6a3386b9 180 TIGRFAM TIGR01971 NuoI: NADH-quinone oxidoreductase, chain I 16 137 1.6E-51 T 15-10-2018 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM378_11765 35fd8aadc968a08adb975d7e6a3386b9 180 Hamap MF_01351 NAD(P)H-quinone oxidoreductase subunit I, chloroplastic [ndhI]. 7 147 27.072 T 15-10-2018 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM378_11765 35fd8aadc968a08adb975d7e6a3386b9 180 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 99 110 - T 15-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AM378_11765 35fd8aadc968a08adb975d7e6a3386b9 180 Gene3D G3DSA:3.30.70.3270 33 176 2.7E-43 T 15-10-2018 AM378_11765 35fd8aadc968a08adb975d7e6a3386b9 180 SUPERFAMILY SSF54862 33 155 4.1E-29 T 15-10-2018 AM378_11765 35fd8aadc968a08adb975d7e6a3386b9 180 Pfam PF12838 4Fe-4S dicluster domain 59 113 4.7E-12 T 15-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AM378_13930 f257f2b47228c4dc6bbb3aed2aeb4ffe 126 SUPERFAMILY SSF54427 2 123 4.52E-36 T 15-10-2018 IPR032710 NTF2-like domain superfamily AM378_13930 f257f2b47228c4dc6bbb3aed2aeb4ffe 126 PIRSF PIRSF029394 1 126 1.4E-46 T 15-10-2018 IPR016918 Uncharacterised conserved protein UCP029394 AM378_13930 f257f2b47228c4dc6bbb3aed2aeb4ffe 126 Gene3D G3DSA:3.10.450.50 1 124 1.5E-40 T 15-10-2018 AM378_09390 1b54c79b2be77085456dde93696af6c2 67 Gene3D G3DSA:3.10.350.10 1 67 8.2E-31 T 15-10-2018 IPR036779 LysM domain superfamily AM378_09390 1b54c79b2be77085456dde93696af6c2 67 Pfam PF05489 Phage Tail Protein X 1 58 5.4E-28 T 15-10-2018 IPR008861 Phage Tail Protein X-like AM378_18875 51d885c4cfa9668ebdf7cf699dd8221f 341 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 62 76 - T 15-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 AM378_18875 51d885c4cfa9668ebdf7cf699dd8221f 341 TIGRFAM TIGR00692 tdh: L-threonine 3-dehydrogenase 3 340 3.1E-184 T 15-10-2018 IPR004627 L-threonine 3-dehydrogenase GO:0006567|GO:0008270|GO:0008743|GO:0055114 KEGG: 00260+1.1.1.103|MetaCyc: PWY-7378 AM378_18875 51d885c4cfa9668ebdf7cf699dd8221f 341 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 26 134 4.6E-32 T 15-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AM378_18875 51d885c4cfa9668ebdf7cf699dd8221f 341 SUPERFAMILY SSF50129 1 173 9.59E-54 T 15-10-2018 IPR011032 GroES-like superfamily AM378_18875 51d885c4cfa9668ebdf7cf699dd8221f 341 SUPERFAMILY SSF51735 141 305 3.4E-38 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily AM378_18875 51d885c4cfa9668ebdf7cf699dd8221f 341 Gene3D G3DSA:3.90.180.10 21 328 3.8E-120 T 15-10-2018 AM378_18875 51d885c4cfa9668ebdf7cf699dd8221f 341 Pfam PF00107 Zinc-binding dehydrogenase 174 301 2.6E-28 T 15-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AM378_18875 51d885c4cfa9668ebdf7cf699dd8221f 341 Gene3D G3DSA:3.40.50.720 153 286 3.8E-120 T 15-10-2018 AM378_18875 51d885c4cfa9668ebdf7cf699dd8221f 341 SMART SM00829 12 338 1.8E-6 T 15-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AM378_18875 51d885c4cfa9668ebdf7cf699dd8221f 341 Hamap MF_00627 L-threonine 3-dehydrogenase [tdh]. 1 340 60.561 T 15-10-2018 IPR004627 L-threonine 3-dehydrogenase GO:0006567|GO:0008270|GO:0008743|GO:0055114 KEGG: 00260+1.1.1.103|MetaCyc: PWY-7378 AM378_15375 25b026b2adbcca805aa91fecca1e244d 180 TIGRFAM TIGR02258 2_5_ligase: 2'-5' RNA ligase 6 174 1.0E-36 T 15-10-2018 IPR004175 RNA 2',3'-cyclic phosphodiesterase GO:0004113|GO:0008664 AM378_15375 25b026b2adbcca805aa91fecca1e244d 180 Gene3D G3DSA:3.90.1140.10 1 175 5.7E-49 T 15-10-2018 AM378_15375 25b026b2adbcca805aa91fecca1e244d 180 SUPERFAMILY SSF55144 6 174 3.92E-42 T 15-10-2018 IPR009097 Cyclic phosphodiesterase AM378_15375 25b026b2adbcca805aa91fecca1e244d 180 Hamap MF_01940 RNA 2',3'-cyclic phosphodiesterase [thpR]. 5 174 22.02 T 15-10-2018 IPR004175 RNA 2',3'-cyclic phosphodiesterase GO:0004113|GO:0008664 AM378_15375 25b026b2adbcca805aa91fecca1e244d 180 Pfam PF02834 LigT like Phosphoesterase 12 89 2.8E-12 T 15-10-2018 IPR014051 Phosphoesterase, HXTX AM378_15375 25b026b2adbcca805aa91fecca1e244d 180 Pfam PF02834 LigT like Phosphoesterase 95 163 2.7E-5 T 15-10-2018 IPR014051 Phosphoesterase, HXTX AM378_01365 efd0cb6464fcca421ab3afa0c0461ea0 81 SUPERFAMILY SSF54285 1 81 1.79E-22 T 15-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp AM378_01365 efd0cb6464fcca421ab3afa0c0461ea0 81 TIGRFAM TIGR01682 moaD: molybdopterin converting factor, subunit 1 2 81 4.4E-23 T 15-10-2018 AM378_01365 efd0cb6464fcca421ab3afa0c0461ea0 81 Pfam PF02597 ThiS family 4 81 4.3E-19 T 15-10-2018 IPR003749 Sulfur carrier ThiS/MoaD-like Reactome: R-HSA-947581 AM378_01365 efd0cb6464fcca421ab3afa0c0461ea0 81 Gene3D G3DSA:3.10.20.30 1 81 7.8E-26 T 15-10-2018 IPR012675 Beta-grasp domain superfamily AM378_12080 8bf0fa8e51e064121b47985ef3a2f3d7 415 PIRSF PIRSF037215 5 411 2.3E-147 T 15-10-2018 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 AM378_12080 8bf0fa8e51e064121b47985ef3a2f3d7 415 TIGRFAM TIGR01882 peptidase-T: peptidase T 7 404 5.1E-96 T 15-10-2018 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 AM378_12080 8bf0fa8e51e064121b47985ef3a2f3d7 415 SUPERFAMILY SSF53187 7 406 9.19E-71 T 15-10-2018 AM378_12080 8bf0fa8e51e064121b47985ef3a2f3d7 415 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 142 179 - T 15-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 AM378_12080 8bf0fa8e51e064121b47985ef3a2f3d7 415 SUPERFAMILY SSF55031 212 322 5.41E-33 T 15-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain AM378_12080 8bf0fa8e51e064121b47985ef3a2f3d7 415 Gene3D G3DSA:3.40.630.10 9 402 2.1E-131 T 15-10-2018 AM378_12080 8bf0fa8e51e064121b47985ef3a2f3d7 415 Pfam PF01546 Peptidase family M20/M25/M40 143 402 4.4E-10 T 15-10-2018 IPR002933 Peptidase M20 GO:0016787 AM378_12080 8bf0fa8e51e064121b47985ef3a2f3d7 415 Pfam PF07687 Peptidase dimerisation domain 209 309 1.4E-9 T 15-10-2018 IPR011650 Peptidase M20, dimerisation domain AM378_12080 8bf0fa8e51e064121b47985ef3a2f3d7 415 Gene3D G3DSA:3.30.70.360 212 322 2.1E-131 T 15-10-2018 AM378_02685 814ac31e193b08d8df0a6a08108341fc 213 Gene3D G3DSA:3.40.50.300 6 213 1.5E-60 T 15-10-2018 AM378_02685 814ac31e193b08d8df0a6a08108341fc 213 PRINTS PR00988 Uridine kinase signature 157 168 1.9E-38 T 15-10-2018 AM378_02685 814ac31e193b08d8df0a6a08108341fc 213 PRINTS PR00988 Uridine kinase signature 87 102 1.9E-38 T 15-10-2018 AM378_02685 814ac31e193b08d8df0a6a08108341fc 213 PRINTS PR00988 Uridine kinase signature 8 25 1.9E-38 T 15-10-2018 AM378_02685 814ac31e193b08d8df0a6a08108341fc 213 PRINTS PR00988 Uridine kinase signature 143 153 1.9E-38 T 15-10-2018 AM378_02685 814ac31e193b08d8df0a6a08108341fc 213 PRINTS PR00988 Uridine kinase signature 179 192 1.9E-38 T 15-10-2018 AM378_02685 814ac31e193b08d8df0a6a08108341fc 213 PRINTS PR00988 Uridine kinase signature 42 53 1.9E-38 T 15-10-2018 AM378_02685 814ac31e193b08d8df0a6a08108341fc 213 TIGRFAM TIGR00235 udk: uridine kinase 6 213 1.9E-95 T 15-10-2018 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|Reactome: R-HSA-73614 AM378_02685 814ac31e193b08d8df0a6a08108341fc 213 Hamap MF_00551 Uridine kinase [udk]. 5 213 41.011 T 15-10-2018 IPR026008 Uridine kinase GO:0004849|GO:0005524|GO:0016773 KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193 AM378_02685 814ac31e193b08d8df0a6a08108341fc 213 SUPERFAMILY SSF52540 6 205 2.58E-50 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_02685 814ac31e193b08d8df0a6a08108341fc 213 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 10 199 5.2E-45 T 15-10-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0016301 Reactome: R-HSA-73614 AM378_03040 a73569b0e039a98a9be53cb04ff7b974 184 Pfam PF00419 Fimbrial protein 37 183 7.7E-16 T 15-10-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM378_03040 a73569b0e039a98a9be53cb04ff7b974 184 SUPERFAMILY SSF49401 34 184 4.87E-34 T 15-10-2018 IPR008966 Adhesion domain superfamily AM378_03040 a73569b0e039a98a9be53cb04ff7b974 184 Gene3D G3DSA:2.60.40.1090 33 183 6.3E-33 T 15-10-2018 IPR036937 Fimbrial-type adhesion domain superfamily GO:0007155|GO:0009289 AM378_01325 f33eeb6595ea873375c8261bdc573e3f 224 TIGRFAM TIGR00347 bioD: dethiobiotin synthase 6 176 4.9E-68 T 15-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 AM378_01325 f33eeb6595ea873375c8261bdc573e3f 224 Gene3D G3DSA:3.40.50.300 2 224 1.9E-75 T 15-10-2018 AM378_01325 f33eeb6595ea873375c8261bdc573e3f 224 PIRSF PIRSF006755 1 223 6.1E-87 T 15-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 AM378_01325 f33eeb6595ea873375c8261bdc573e3f 224 Pfam PF13500 AAA domain 5 211 3.4E-41 T 15-10-2018 AM378_01325 f33eeb6595ea873375c8261bdc573e3f 224 SUPERFAMILY SSF52540 3 217 1.91E-68 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_01325 f33eeb6595ea873375c8261bdc573e3f 224 Hamap MF_00336 ATP-dependent dethiobiotin synthetase BioD [bioD]. 2 211 31.451 T 15-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 AM378_15895 a4432f0689b94bc98ad01aa356cf51cc 416 Gene3D G3DSA:1.20.1250.20 199 408 1.3E-27 T 15-10-2018 AM378_15895 a4432f0689b94bc98ad01aa356cf51cc 416 TIGRFAM TIGR00889 2A0110: nucleoside transporter 1 408 6.6E-182 T 15-10-2018 IPR004740 Nucleoside:H+ symporter GO:0005337|GO:0015858|GO:0016021 AM378_15895 a4432f0689b94bc98ad01aa356cf51cc 416 Gene3D G3DSA:1.20.1250.20 5 190 4.7E-14 T 15-10-2018 AM378_15895 a4432f0689b94bc98ad01aa356cf51cc 416 Pfam PF03825 Nucleoside H+ symporter 1 406 1.5E-159 T 15-10-2018 IPR004740 Nucleoside:H+ symporter GO:0005337|GO:0015858|GO:0016021 AM378_15895 a4432f0689b94bc98ad01aa356cf51cc 416 SUPERFAMILY SSF103473 8 406 8.2E-33 T 15-10-2018 IPR036259 MFS transporter superfamily AM378_21090 ba7c8b0e209b486bdb3fd65f4961cad5 132 Pfam PF03994 Domain of Unknown Function (DUF350) 13 65 7.2E-11 T 15-10-2018 IPR007140 Protein of unknown function DUF350 AM378_21090 ba7c8b0e209b486bdb3fd65f4961cad5 132 Pfam PF03994 Domain of Unknown Function (DUF350) 78 130 6.2E-11 T 15-10-2018 IPR007140 Protein of unknown function DUF350 AM378_02055 a16d116724400c1e2ec8a5feb97490b2 306 SUPERFAMILY SSF103481 45 146 7.45E-13 T 15-10-2018 AM378_02055 a16d116724400c1e2ec8a5feb97490b2 306 Pfam PF00892 EamA-like transporter family 16 144 2.1E-21 T 15-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AM378_02055 a16d116724400c1e2ec8a5feb97490b2 306 Pfam PF00892 EamA-like transporter family 153 287 7.2E-18 T 15-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AM378_02055 a16d116724400c1e2ec8a5feb97490b2 306 SUPERFAMILY SSF103481 189 290 7.59E-13 T 15-10-2018 AM378_12315 5ef31754b450c8f97df7f246496e7976 145 Pfam PF15970 HicB_like antitoxin of bacterial toxin-antitoxin system 5 84 3.0E-24 T 15-10-2018 IPR031807 HicB-like antitoxin of toxin-antitoxin system AM378_21310 5b8cda0f72f6ba337267ef4b6af7fbb9 643 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 100 593 2.2E-247 T 15-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 AM378_21310 5b8cda0f72f6ba337267ef4b6af7fbb9 643 SMART SM00382 184 323 1.9E-26 T 15-10-2018 IPR003593 AAA+ ATPase domain AM378_21310 5b8cda0f72f6ba337267ef4b6af7fbb9 643 Gene3D G3DSA:2.40.50.920 24 100 1.1E-37 T 15-10-2018 AM378_21310 5b8cda0f72f6ba337267ef4b6af7fbb9 643 Pfam PF06480 FtsH Extracellular 5 93 6.4E-16 T 15-10-2018 IPR011546 Peptidase M41, FtsH extracellular GO:0004222|GO:0005524|GO:0008270|GO:0016021 Reactome: R-HSA-8949664 AM378_21310 5b8cda0f72f6ba337267ef4b6af7fbb9 643 SUPERFAMILY SSF140990 402 601 1.57E-72 T 15-10-2018 IPR037219 Peptidase M41-like GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 AM378_21310 5b8cda0f72f6ba337267ef4b6af7fbb9 643 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 3 608 37.398 T 15-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 AM378_21310 5b8cda0f72f6ba337267ef4b6af7fbb9 643 Gene3D G3DSA:1.10.8.60 322 396 1.2E-28 T 15-10-2018 AM378_21310 5b8cda0f72f6ba337267ef4b6af7fbb9 643 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 188 320 6.4E-46 T 15-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AM378_21310 5b8cda0f72f6ba337267ef4b6af7fbb9 643 Gene3D G3DSA:3.40.50.300 141 320 6.2E-71 T 15-10-2018 AM378_21310 5b8cda0f72f6ba337267ef4b6af7fbb9 643 Pfam PF01434 Peptidase family M41 382 591 7.4E-82 T 15-10-2018 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 AM378_21310 5b8cda0f72f6ba337267ef4b6af7fbb9 643 Gene3D G3DSA:1.20.58.760 397 600 1.8E-69 T 15-10-2018 AM378_21310 5b8cda0f72f6ba337267ef4b6af7fbb9 643 ProSitePatterns PS00674 AAA-protein family signature. 291 309 - T 15-10-2018 IPR003960 ATPase, AAA-type, conserved site GO:0005524 AM378_21310 5b8cda0f72f6ba337267ef4b6af7fbb9 643 SUPERFAMILY SSF52540 141 391 1.31E-72 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_02145 38a5ade65cd5522a5e5e054df3576202 387 PRINTS PR00143 Citrate synthase signature 340 354 3.1E-36 T 15-10-2018 IPR002020 Citrate synthase GO:0046912 AM378_02145 38a5ade65cd5522a5e5e054df3576202 387 PRINTS PR00143 Citrate synthase signature 263 283 3.1E-36 T 15-10-2018 IPR002020 Citrate synthase GO:0046912 AM378_02145 38a5ade65cd5522a5e5e054df3576202 387 PRINTS PR00143 Citrate synthase signature 210 238 3.1E-36 T 15-10-2018 IPR002020 Citrate synthase GO:0046912 AM378_02145 38a5ade65cd5522a5e5e054df3576202 387 PRINTS PR00143 Citrate synthase signature 138 151 3.1E-36 T 15-10-2018 IPR002020 Citrate synthase GO:0046912 AM378_02145 38a5ade65cd5522a5e5e054df3576202 387 PRINTS PR00143 Citrate synthase signature 320 336 3.1E-36 T 15-10-2018 IPR002020 Citrate synthase GO:0046912 AM378_02145 38a5ade65cd5522a5e5e054df3576202 387 PRINTS PR00143 Citrate synthase signature 188 203 3.1E-36 T 15-10-2018 IPR002020 Citrate synthase GO:0046912 AM378_02145 38a5ade65cd5522a5e5e054df3576202 387 ProSitePatterns PS00480 Citrate synthase signature. 270 282 - T 15-10-2018 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 Reactome: R-HSA-1268020|Reactome: R-HSA-71403 AM378_02145 38a5ade65cd5522a5e5e054df3576202 387 Gene3D G3DSA:1.10.230.10 236 334 1.3E-130 T 15-10-2018 IPR016143 Citrate synthase-like, small alpha subdomain AM378_02145 38a5ade65cd5522a5e5e054df3576202 387 Gene3D G3DSA:1.10.580.10 41 367 1.3E-130 T 15-10-2018 IPR016142 Citrate synthase-like, large alpha subdomain Reactome: R-HSA-1268020|Reactome: R-HSA-71403 AM378_02145 38a5ade65cd5522a5e5e054df3576202 387 PIRSF PIRSF001369 14 387 1.0E-109 T 15-10-2018 IPR024176 Citrate synthase, bacterial-type AM378_02145 38a5ade65cd5522a5e5e054df3576202 387 SUPERFAMILY SSF48256 20 387 1.18E-121 T 15-10-2018 IPR036969 Citrate synthase superfamily GO:0046912 AM378_02145 38a5ade65cd5522a5e5e054df3576202 387 Pfam PF00285 Citrate synthase, C-terminal domain 21 369 2.4E-113 T 15-10-2018 IPR002020 Citrate synthase GO:0046912 AM378_02145 38a5ade65cd5522a5e5e054df3576202 387 TIGRFAM TIGR01800 cit_synth_II: 2-methylcitrate synthase/citrate synthase II 20 387 1.3E-161 T 15-10-2018 IPR011278 2-methylcitrate synthase/citrate synthase type I GO:0005737|GO:0046912 AM378_11215 430d0c7e9ab10216311592f92296d7c1 262 SMART SM00062 28 256 1.7E-74 T 15-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AM378_11215 430d0c7e9ab10216311592f92296d7c1 262 Gene3D G3DSA:3.40.190.10 114 213 1.7E-78 T 15-10-2018 AM378_11215 430d0c7e9ab10216311592f92296d7c1 262 Gene3D G3DSA:3.40.190.10 31 252 1.7E-78 T 15-10-2018 AM378_11215 430d0c7e9ab10216311592f92296d7c1 262 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 29 254 6.2E-64 T 15-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AM378_11215 430d0c7e9ab10216311592f92296d7c1 262 TIGRFAM TIGR01096 3A0103s03R: lysine-arginine-ornithine-binding periplasmic protein 10 253 5.2E-81 T 15-10-2018 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter GO:0030288|GO:0071705 AM378_11215 430d0c7e9ab10216311592f92296d7c1 262 SUPERFAMILY SSF53850 2 256 2.62E-65 T 15-10-2018 AM378_00180 0fcbc3f18623474f1430ff191ddce9d3 122 Pfam PF10757 Biofilm formation regulator YbaJ 1 118 8.1E-66 T 15-10-2018 IPR019693 Biofilm formation regulator YbaJ AM378_00040 c8efcadecc3e7b71bda7c7447b0e09b9 153 SMART SM00344 2 111 8.8E-36 T 15-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 AM378_00040 c8efcadecc3e7b71bda7c7447b0e09b9 153 Pfam PF13412 Winged helix-turn-helix DNA-binding 2 49 4.3E-17 T 15-10-2018 AM378_00040 c8efcadecc3e7b71bda7c7447b0e09b9 153 SUPERFAMILY SSF54909 62 151 1.01E-20 T 15-10-2018 IPR011008 Dimeric alpha-beta barrel AM378_00040 c8efcadecc3e7b71bda7c7447b0e09b9 153 SUPERFAMILY SSF46785 2 92 2.46E-17 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM378_00040 c8efcadecc3e7b71bda7c7447b0e09b9 153 Gene3D G3DSA:1.10.10.10 3 54 2.4E-22 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_00040 c8efcadecc3e7b71bda7c7447b0e09b9 153 Pfam PF01037 Lrp/AsnC ligand binding domain 68 141 2.6E-20 T 15-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain AM378_00040 c8efcadecc3e7b71bda7c7447b0e09b9 153 Gene3D G3DSA:3.30.70.920 55 139 8.1E-24 T 15-10-2018 AM378_00040 c8efcadecc3e7b71bda7c7447b0e09b9 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 2 18 9.3E-9 T 15-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 AM378_00040 c8efcadecc3e7b71bda7c7447b0e09b9 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 29 48 9.3E-9 T 15-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 AM378_00040 c8efcadecc3e7b71bda7c7447b0e09b9 153 ProSitePatterns PS00519 AsnC-type HTH domain signature. 20 46 - T 15-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site AM378_03740 99d390ac6d1bfb9f82de636915c2e022 152 TIGRFAM TIGR00160 MGSA: methylglyoxal synthase 11 151 4.4E-69 T 15-10-2018 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 AM378_03740 99d390ac6d1bfb9f82de636915c2e022 152 SUPERFAMILY SSF52335 6 151 1.53E-60 T 15-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily AM378_03740 99d390ac6d1bfb9f82de636915c2e022 152 Hamap MF_00549 Methylglyoxal synthase [mgsA]. 12 131 33.76 T 15-10-2018 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 AM378_03740 99d390ac6d1bfb9f82de636915c2e022 152 Gene3D G3DSA:3.40.50.1380 1 152 4.4E-71 T 15-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily AM378_03740 99d390ac6d1bfb9f82de636915c2e022 152 PIRSF PIRSF006614 8 151 3.3E-67 T 15-10-2018 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 AM378_03740 99d390ac6d1bfb9f82de636915c2e022 152 ProSitePatterns PS01335 Methylglyoxal synthase active site. 65 73 - T 15-10-2018 IPR018148 Methylglyoxal synthase, active site GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 AM378_03740 99d390ac6d1bfb9f82de636915c2e022 152 Pfam PF02142 MGS-like domain 26 118 1.4E-20 T 15-10-2018 IPR011607 Methylglyoxal synthase-like domain AM378_03740 99d390ac6d1bfb9f82de636915c2e022 152 SMART SM00851 25 118 8.7E-29 T 15-10-2018 IPR011607 Methylglyoxal synthase-like domain AM378_21595 9fc5467c88750b2f95de0b49062fb12a 902 Gene3D G3DSA:1.20.1110.10 257 387 5.3E-22 T 15-10-2018 AM378_21595 9fc5467c88750b2f95de0b49062fb12a 902 Gene3D G3DSA:3.40.1110.10 388 554 1.2E-59 T 15-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 AM378_21595 9fc5467c88750b2f95de0b49062fb12a 902 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 604 732 1.6E-30 T 15-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 AM378_21595 9fc5467c88750b2f95de0b49062fb12a 902 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 128 393 4.1E-36 T 15-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 AM378_21595 9fc5467c88750b2f95de0b49062fb12a 902 SMART SM00831 50 122 3.0E-4 T 15-10-2018 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 AM378_21595 9fc5467c88750b2f95de0b49062fb12a 902 SUPERFAMILY SSF81660 370 551 6.76E-40 T 15-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 AM378_21595 9fc5467c88750b2f95de0b49062fb12a 902 Pfam PF00122 E1-E2 ATPase 158 355 4.7E-44 T 15-10-2018 AM378_21595 9fc5467c88750b2f95de0b49062fb12a 902 Gene3D G3DSA:3.40.50.1000 590 681 7.6E-24 T 15-10-2018 IPR023214 HAD superfamily AM378_21595 9fc5467c88750b2f95de0b49062fb12a 902 SUPERFAMILY SSF81665 57 900 6.02E-100 T 15-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 AM378_21595 9fc5467c88750b2f95de0b49062fb12a 902 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 377 383 - T 15-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 AM378_21595 9fc5467c88750b2f95de0b49062fb12a 902 PRINTS PR01836 Magnesium-transporting ATPase signature 719 730 2.8E-82 T 15-10-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 AM378_21595 9fc5467c88750b2f95de0b49062fb12a 902 PRINTS PR01836 Magnesium-transporting ATPase signature 751 764 2.8E-82 T 15-10-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 AM378_21595 9fc5467c88750b2f95de0b49062fb12a 902 PRINTS PR01836 Magnesium-transporting ATPase signature 288 304 2.8E-82 T 15-10-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 AM378_21595 9fc5467c88750b2f95de0b49062fb12a 902 PRINTS PR01836 Magnesium-transporting ATPase signature 409 422 2.8E-82 T 15-10-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 AM378_21595 9fc5467c88750b2f95de0b49062fb12a 902 PRINTS PR01836 Magnesium-transporting ATPase signature 856 877 2.8E-82 T 15-10-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 AM378_21595 9fc5467c88750b2f95de0b49062fb12a 902 PRINTS PR01836 Magnesium-transporting ATPase signature 701 716 2.8E-82 T 15-10-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 AM378_21595 9fc5467c88750b2f95de0b49062fb12a 902 PRINTS PR01836 Magnesium-transporting ATPase signature 305 324 2.8E-82 T 15-10-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 AM378_21595 9fc5467c88750b2f95de0b49062fb12a 902 PRINTS PR01836 Magnesium-transporting ATPase signature 771 787 2.8E-82 T 15-10-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 AM378_21595 9fc5467c88750b2f95de0b49062fb12a 902 PRINTS PR01836 Magnesium-transporting ATPase signature 806 827 2.8E-82 T 15-10-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 AM378_21595 9fc5467c88750b2f95de0b49062fb12a 902 Gene3D G3DSA:1.20.1110.10 682 807 1.2E-10 T 15-10-2018 AM378_21595 9fc5467c88750b2f95de0b49062fb12a 902 SUPERFAMILY SSF56784 534 687 3.0E-38 T 15-10-2018 IPR036412 HAD-like superfamily AM378_21595 9fc5467c88750b2f95de0b49062fb12a 902 SUPERFAMILY SSF81653 173 274 1.06E-26 T 15-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 AM378_21595 9fc5467c88750b2f95de0b49062fb12a 902 Pfam PF00690 Cation transporter/ATPase, N-terminus 55 117 1.1E-10 T 15-10-2018 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 AM378_21595 9fc5467c88750b2f95de0b49062fb12a 902 Pfam PF00689 Cation transporting ATPase, C-terminus 726 892 2.9E-13 T 15-10-2018 IPR006068 Cation-transporting P-type ATPase, C-terminal Reactome: R-HSA-936837 AM378_21595 9fc5467c88750b2f95de0b49062fb12a 902 Gene3D G3DSA:2.70.150.10 137 256 3.3E-33 T 15-10-2018 AM378_21595 9fc5467c88750b2f95de0b49062fb12a 902 Pfam PF00702 haloacid dehalogenase-like hydrolase 371 657 5.6E-20 T 15-10-2018 AM378_21595 9fc5467c88750b2f95de0b49062fb12a 902 TIGRFAM TIGR01524 ATPase-IIIB_Mg: magnesium-translocating P-type ATPase 43 902 0.0 T 15-10-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 AM378_16315 5fcbd9d7ac10d95caed94b98f19b7704 344 Gene3D G3DSA:1.10.443.10 172 341 4.5E-47 T 15-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 AM378_16315 5fcbd9d7ac10d95caed94b98f19b7704 344 SUPERFAMILY SSF56349 66 330 1.65E-43 T 15-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AM378_16315 5fcbd9d7ac10d95caed94b98f19b7704 344 Pfam PF00589 Phage integrase family 177 244 7.1E-7 T 15-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AM378_16315 5fcbd9d7ac10d95caed94b98f19b7704 344 Pfam PF00589 Phage integrase family 265 322 8.5E-13 T 15-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AM378_18710 46d9999ad109ce17bf5fe897645b1e8a 342 SUPERFAMILY SSF53822 68 340 4.4E-92 T 15-10-2018 IPR028082 Periplasmic binding protein-like I AM378_18710 46d9999ad109ce17bf5fe897645b1e8a 342 Pfam PF00356 Bacterial regulatory proteins, lacI family 11 55 8.5E-18 T 15-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM378_18710 46d9999ad109ce17bf5fe897645b1e8a 342 Gene3D G3DSA:3.40.50.2300 69 314 2.6E-84 T 15-10-2018 AM378_18710 46d9999ad109ce17bf5fe897645b1e8a 342 ProSitePatterns PS00356 LacI-type HTH domain signature. 12 30 - T 15-10-2018 AM378_18710 46d9999ad109ce17bf5fe897645b1e8a 342 Gene3D G3DSA:1.10.260.40 1 67 5.7E-24 T 15-10-2018 AM378_18710 46d9999ad109ce17bf5fe897645b1e8a 342 Pfam PF13377 Periplasmic binding protein-like domain 176 337 1.2E-45 T 15-10-2018 AM378_18710 46d9999ad109ce17bf5fe897645b1e8a 342 Gene3D G3DSA:3.40.50.2300 168 297 2.6E-84 T 15-10-2018 AM378_18710 46d9999ad109ce17bf5fe897645b1e8a 342 SUPERFAMILY SSF47413 8 67 4.59E-15 T 15-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AM378_18710 46d9999ad109ce17bf5fe897645b1e8a 342 SMART SM00354 9 79 3.6E-28 T 15-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM378_04325 5949824b86d5e2447ac0cd066d205bad 55 Pfam PF01783 Ribosomal L32p protein family 2 54 3.1E-19 T 15-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM378_04325 5949824b86d5e2447ac0cd066d205bad 55 SUPERFAMILY SSF57829 2 54 4.46E-18 T 15-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 AM378_04325 5949824b86d5e2447ac0cd066d205bad 55 TIGRFAM TIGR01031 rpmF_bact: ribosomal protein bL32 2 54 2.6E-19 T 15-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM378_04325 5949824b86d5e2447ac0cd066d205bad 55 Hamap MF_00340 50S ribosomal protein L32 [rpmF]. 1 54 17.023 T 15-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM378_14950 5e1ff49ca3600b2f3652f3f11d2844ee 505 SMART SM00382 39 229 5.4E-14 T 15-10-2018 IPR003593 AAA+ ATPase domain AM378_14950 5e1ff49ca3600b2f3652f3f11d2844ee 505 SMART SM00382 289 473 0.44 T 15-10-2018 IPR003593 AAA+ ATPase domain AM378_14950 5e1ff49ca3600b2f3652f3f11d2844ee 505 Gene3D G3DSA:3.40.50.300 258 504 1.3E-41 T 15-10-2018 AM378_14950 5e1ff49ca3600b2f3652f3f11d2844ee 505 Gene3D G3DSA:3.40.50.300 5 250 5.5E-56 T 15-10-2018 AM378_14950 5e1ff49ca3600b2f3652f3f11d2844ee 505 ProSitePatterns PS00211 ABC transporters family signature. 408 422 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM378_14950 5e1ff49ca3600b2f3652f3f11d2844ee 505 SUPERFAMILY SSF52540 13 241 3.28E-55 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_14950 5e1ff49ca3600b2f3652f3f11d2844ee 505 Pfam PF00005 ABC transporter 30 181 1.4E-27 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM378_14950 5e1ff49ca3600b2f3652f3f11d2844ee 505 SUPERFAMILY SSF52540 280 495 9.06E-42 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_14950 5e1ff49ca3600b2f3652f3f11d2844ee 505 Pfam PF00005 ABC transporter 281 435 1.2E-21 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM378_22640 44d5d0ba1f469d3c2b3c148c95bf9ade 125 Gene3D G3DSA:2.60.40.1470 1 125 1.7E-46 T 15-10-2018 IPR036767 ApaG domain superfamily AM378_22640 44d5d0ba1f469d3c2b3c148c95bf9ade 125 Hamap MF_00791 Protein ApaG [apaG]. 1 125 32.406 T 15-10-2018 IPR023065 Uncharacterised protein family ApaG AM378_22640 44d5d0ba1f469d3c2b3c148c95bf9ade 125 SUPERFAMILY SSF110069 5 125 1.96E-48 T 15-10-2018 IPR036767 ApaG domain superfamily AM378_22640 44d5d0ba1f469d3c2b3c148c95bf9ade 125 Pfam PF04379 ApaG domain 18 102 4.9E-34 T 15-10-2018 IPR007474 ApaG domain AM378_10545 4d2c0f165ec264f46c82d654401d715f 144 Pfam PF07681 DoxX 20 98 5.1E-17 T 15-10-2018 IPR032808 DoxX family AM378_13795 dfb1a4d27cb7d1da0386981d54d6e04e 292 Gene3D G3DSA:1.10.10.10 5 94 7.7E-21 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_13795 dfb1a4d27cb7d1da0386981d54d6e04e 292 Gene3D G3DSA:3.40.190.10 163 256 6.7E-47 T 15-10-2018 AM378_13795 dfb1a4d27cb7d1da0386981d54d6e04e 292 SUPERFAMILY SSF46785 3 86 5.93E-21 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM378_13795 dfb1a4d27cb7d1da0386981d54d6e04e 292 Gene3D G3DSA:3.40.190.10 97 285 6.7E-47 T 15-10-2018 AM378_13795 dfb1a4d27cb7d1da0386981d54d6e04e 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 1.6E-8 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_13795 dfb1a4d27cb7d1da0386981d54d6e04e 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 1.6E-8 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_13795 dfb1a4d27cb7d1da0386981d54d6e04e 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 1.6E-8 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_13795 dfb1a4d27cb7d1da0386981d54d6e04e 292 Pfam PF03466 LysR substrate binding domain 91 271 1.5E-21 T 15-10-2018 IPR005119 LysR, substrate-binding AM378_13795 dfb1a4d27cb7d1da0386981d54d6e04e 292 SUPERFAMILY SSF53850 84 285 1.23E-24 T 15-10-2018 AM378_13795 dfb1a4d27cb7d1da0386981d54d6e04e 292 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 65 1.3E-18 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_01620 fd5b41c33a680ac1d1cfd0b287449f2f 384 Gene3D G3DSA:3.90.1150.10 22 381 9.1E-132 T 15-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AM378_01620 fd5b41c33a680ac1d1cfd0b287449f2f 384 Gene3D G3DSA:3.40.640.10 44 282 9.1E-132 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AM378_01620 fd5b41c33a680ac1d1cfd0b287449f2f 384 Pfam PF00155 Aminotransferase class I and II 32 381 1.1E-62 T 15-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AM378_01620 fd5b41c33a680ac1d1cfd0b287449f2f 384 SUPERFAMILY SSF53383 11 383 3.59E-100 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM378_16065 1f17b52e5601766b2685603ab186b82c 337 SUPERFAMILY SSF53067 101 309 6.74E-45 T 15-10-2018 AM378_16065 1f17b52e5601766b2685603ab186b82c 337 Gene3D G3DSA:3.30.420.40 129 293 1.1E-134 T 15-10-2018 AM378_16065 1f17b52e5601766b2685603ab186b82c 337 ProSitePatterns PS01016 Glycoprotease family signature. 96 116 - T 15-10-2018 IPR017860 Peptidase M22, conserved site Reactome: R-HSA-6782315 AM378_16065 1f17b52e5601766b2685603ab186b82c 337 Hamap MF_01445 tRNA N6-adenosine threonylcarbamoyltransferase [tsaD]. 1 331 64.394 T 15-10-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 AM378_16065 1f17b52e5601766b2685603ab186b82c 337 SUPERFAMILY SSF53067 3 123 9.71E-32 T 15-10-2018 AM378_16065 1f17b52e5601766b2685603ab186b82c 337 Gene3D G3DSA:3.30.420.40 3 315 1.1E-134 T 15-10-2018 AM378_16065 1f17b52e5601766b2685603ab186b82c 337 Pfam PF00814 Glycoprotease family 24 307 2.3E-104 T 15-10-2018 IPR000905 Gcp-like domain AM378_16065 1f17b52e5601766b2685603ab186b82c 337 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 263 272 7.7E-53 T 15-10-2018 IPR017861 Kae1/TsaD family AM378_16065 1f17b52e5601766b2685603ab186b82c 337 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 76 96 7.7E-53 T 15-10-2018 IPR017861 Kae1/TsaD family AM378_16065 1f17b52e5601766b2685603ab186b82c 337 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 97 116 7.7E-53 T 15-10-2018 IPR017861 Kae1/TsaD family AM378_16065 1f17b52e5601766b2685603ab186b82c 337 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 131 143 7.7E-53 T 15-10-2018 IPR017861 Kae1/TsaD family AM378_16065 1f17b52e5601766b2685603ab186b82c 337 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 4 17 7.7E-53 T 15-10-2018 IPR017861 Kae1/TsaD family AM378_16065 1f17b52e5601766b2685603ab186b82c 337 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 154 175 7.7E-53 T 15-10-2018 IPR017861 Kae1/TsaD family AM378_16065 1f17b52e5601766b2685603ab186b82c 337 TIGRFAM TIGR00329 gcp_kae1: metallohydrolase, glycoprotease/Kae1 family 4 306 3.2E-128 T 15-10-2018 IPR017861 Kae1/TsaD family AM378_16065 1f17b52e5601766b2685603ab186b82c 337 TIGRFAM TIGR03723 T6A_TsaD_YgjD: tRNA threonylcarbamoyl adenosine modification protein TsaD 3 313 1.3E-136 T 15-10-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 AM378_10565 c501421c776f6edfb705a53a2a691c4b 229 ProSitePatterns PS01273 Coenzyme A transferases signature 1. 18 33 - T 15-10-2018 IPR004163 Coenzyme A transferase binding site GO:0008410 Reactome: R-HSA-77108 AM378_10565 c501421c776f6edfb705a53a2a691c4b 229 Pfam PF01144 Coenzyme A transferase 7 218 2.7E-66 T 15-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 AM378_10565 c501421c776f6edfb705a53a2a691c4b 229 TIGRFAM TIGR02429 pcaI_scoA_fam: 3-oxoacid CoA-transferase, A subunit 1 220 4.8E-115 T 15-10-2018 IPR012792 3-oxoacid CoA-transferase, subunit A GO:0008410 Reactome: R-HSA-77108 AM378_10565 c501421c776f6edfb705a53a2a691c4b 229 Gene3D G3DSA:3.40.1080.10 1 218 3.7E-78 T 15-10-2018 AM378_10565 c501421c776f6edfb705a53a2a691c4b 229 SUPERFAMILY SSF100950 2 223 5.5E-78 T 15-10-2018 IPR037171 NagB/RpiA transferase-like AM378_10565 c501421c776f6edfb705a53a2a691c4b 229 SMART SM00882 6 219 5.7E-81 T 15-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 AM378_06355 659e182f16fae4d53bba0e4b0d25db38 286 Pfam PF12146 Serine aminopeptidase, S33 26 262 2.9E-21 T 15-10-2018 IPR022742 Serine aminopeptidase, S33 AM378_06355 659e182f16fae4d53bba0e4b0d25db38 286 Gene3D G3DSA:3.40.50.1820 12 267 1.5E-50 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold AM378_06355 659e182f16fae4d53bba0e4b0d25db38 286 Gene3D G3DSA:1.10.10.800 134 212 1.5E-50 T 15-10-2018 AM378_06355 659e182f16fae4d53bba0e4b0d25db38 286 SUPERFAMILY SSF53474 12 286 2.04E-52 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold AM378_15935 9a4efd9269c84976577eb85ebf9524cd 304 SUPERFAMILY SSF53850 91 297 1.38E-40 T 15-10-2018 AM378_15935 9a4efd9269c84976577eb85ebf9524cd 304 Gene3D G3DSA:3.40.190.10 93 289 3.1E-64 T 15-10-2018 AM378_15935 9a4efd9269c84976577eb85ebf9524cd 304 Pfam PF03466 LysR substrate binding domain 89 293 1.1E-40 T 15-10-2018 IPR005119 LysR, substrate-binding AM378_15935 9a4efd9269c84976577eb85ebf9524cd 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 3.4E-17 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_15935 9a4efd9269c84976577eb85ebf9524cd 304 SUPERFAMILY SSF46785 4 113 7.14E-21 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM378_15935 9a4efd9269c84976577eb85ebf9524cd 304 Gene3D G3DSA:3.40.190.10 164 264 3.1E-64 T 15-10-2018 AM378_15935 9a4efd9269c84976577eb85ebf9524cd 304 Gene3D G3DSA:1.10.10.10 3 89 7.3E-23 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_13990 a678d247f849babcd8eda1d86b31084f 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 3.3E-41 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_13990 a678d247f849babcd8eda1d86b31084f 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 3.3E-41 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_13990 a678d247f849babcd8eda1d86b31084f 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 3.3E-41 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_13990 a678d247f849babcd8eda1d86b31084f 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 209 229 3.3E-41 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_13990 a678d247f849babcd8eda1d86b31084f 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 3.3E-41 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_13990 a678d247f849babcd8eda1d86b31084f 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 3.3E-41 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_13990 a678d247f849babcd8eda1d86b31084f 246 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 141 169 - T 15-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AM378_13990 a678d247f849babcd8eda1d86b31084f 246 Gene3D G3DSA:3.40.50.720 8 246 2.0E-81 T 15-10-2018 AM378_13990 a678d247f849babcd8eda1d86b31084f 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 4.2E-13 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_13990 a678d247f849babcd8eda1d86b31084f 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 4.2E-13 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_13990 a678d247f849babcd8eda1d86b31084f 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 4.2E-13 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_13990 a678d247f849babcd8eda1d86b31084f 246 SUPERFAMILY SSF51735 8 245 4.13E-83 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily AM378_13990 a678d247f849babcd8eda1d86b31084f 246 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 7 185 4.6E-5 T 15-10-2018 AM378_13990 a678d247f849babcd8eda1d86b31084f 246 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 245 2.1E-64 T 15-10-2018 AM378_09935 718f4c6093281d0f5fc4a5b9f64dd7bc 178 TIGRFAM TIGR03358 VI_chp_5: type VI secretion protein, VC_A0107 family 10 164 6.0E-57 T 15-10-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 AM378_09935 718f4c6093281d0f5fc4a5b9f64dd7bc 178 PIRSF PIRSF028301 4 178 8.4E-60 T 15-10-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 AM378_09935 718f4c6093281d0f5fc4a5b9f64dd7bc 178 Pfam PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 14 164 2.5E-58 T 15-10-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 AM378_13180 43b94f5382a7aa8075107c7d75f720ac 266 SUPERFAMILY SSF53613 5 265 6.7E-80 T 15-10-2018 IPR029056 Ribokinase-like AM378_13180 43b94f5382a7aa8075107c7d75f720ac 266 Pfam PF08543 Phosphomethylpyrimidine kinase 13 260 2.8E-93 T 15-10-2018 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-6798695|Reactome: R-HSA-964975 AM378_13180 43b94f5382a7aa8075107c7d75f720ac 266 Gene3D G3DSA:3.40.1190.20 1 266 1.6E-102 T 15-10-2018 IPR029056 Ribokinase-like AM378_13180 43b94f5382a7aa8075107c7d75f720ac 266 TIGRFAM TIGR00097 HMP-P_kinase: hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase 6 262 2.2E-102 T 15-10-2018 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase GO:0008972|GO:0009228 KEGG: 00730+2.7.1.49|MetaCyc: PWY-6910|MetaCyc: PWY-7356|MetaCyc: PWY-7357 AM378_08395 bb5b7c416bce38cea4ef5210080467ae 347 PIRSF PIRSF036407 1 346 1.6E-117 T 15-10-2018 IPR004536 Selenophosphate synthetase GO:0005524 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 AM378_08395 bb5b7c416bce38cea4ef5210080467ae 347 Gene3D G3DSA:3.30.1330.10 2 162 7.3E-49 T 15-10-2018 IPR036921 PurM-like, N-terminal domain superfamily AM378_08395 bb5b7c416bce38cea4ef5210080467ae 347 TIGRFAM TIGR00476 selD: selenide, water dikinase 7 313 5.1E-136 T 15-10-2018 IPR004536 Selenophosphate synthetase GO:0005524 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 AM378_08395 bb5b7c416bce38cea4ef5210080467ae 347 SUPERFAMILY SSF55326 7 161 3.79E-42 T 15-10-2018 IPR036921 PurM-like, N-terminal domain superfamily AM378_08395 bb5b7c416bce38cea4ef5210080467ae 347 Hamap MF_00625 Selenide, water dikinase [selD]. 5 347 45.824 T 15-10-2018 IPR023061 Selenophosphate synthetase, class I GO:0004756|GO:0005524|GO:0016260 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 AM378_08395 bb5b7c416bce38cea4ef5210080467ae 347 Pfam PF00586 AIR synthase related protein, N-terminal domain 50 157 1.3E-18 T 15-10-2018 IPR016188 PurM-like, N-terminal domain AM378_08395 bb5b7c416bce38cea4ef5210080467ae 347 SUPERFAMILY SSF56042 164 334 1.39E-48 T 15-10-2018 IPR036676 PurM-like, C-terminal domain superfamily AM378_08395 bb5b7c416bce38cea4ef5210080467ae 347 Pfam PF02769 AIR synthase related protein, C-terminal domain 169 334 9.8E-26 T 15-10-2018 IPR010918 PurM-like, C-terminal domain AM378_08395 bb5b7c416bce38cea4ef5210080467ae 347 Gene3D G3DSA:3.90.650.10 164 347 1.2E-51 T 15-10-2018 IPR036676 PurM-like, C-terminal domain superfamily AM378_18190 9af33aa9e55ae70e12e834873503495f 833 ProSitePatterns PS01151 Fimbrial biogenesis outer membrane usher protein signature. 310 320 - T 15-10-2018 IPR018030 Fimbrial membrane usher, conserved site AM378_18190 9af33aa9e55ae70e12e834873503495f 833 Gene3D G3DSA:2.60.40.3110 268 356 2.1E-31 T 15-10-2018 AM378_18190 9af33aa9e55ae70e12e834873503495f 833 Pfam PF00577 Outer membrane usher protein 197 748 1.4E-173 T 15-10-2018 IPR000015 Outer membrane usher protein GO:0009297|GO:0015473|GO:0016020 AM378_18190 9af33aa9e55ae70e12e834873503495f 833 SUPERFAMILY SSF141729 33 153 3.14E-30 T 15-10-2018 IPR037224 PapC, N-terminal domain superfamily GO:0005515 AM378_18190 9af33aa9e55ae70e12e834873503495f 833 Gene3D G3DSA:2.60.40.2610 662 753 6.6E-10 T 15-10-2018 AM378_18190 9af33aa9e55ae70e12e834873503495f 833 Gene3D G3DSA:2.60.40.2070 757 832 2.3E-25 T 15-10-2018 AM378_18190 9af33aa9e55ae70e12e834873503495f 833 Pfam PF13954 PapC N-terminal domain 34 179 2.9E-38 T 15-10-2018 IPR025885 PapC, N-terminal domain GO:0005515 AM378_18190 9af33aa9e55ae70e12e834873503495f 833 Gene3D G3DSA:3.10.20.410 32 155 3.1E-22 T 15-10-2018 AM378_18190 9af33aa9e55ae70e12e834873503495f 833 Pfam PF13953 PapC C-terminal domain 757 815 1.0E-14 T 15-10-2018 IPR025949 PapC-like, C-terminal domain AM378_03355 5103dab0e3eefef786a0b9e4baadb62f 317 Pfam PF04393 Protein of unknown function (DUF535) 33 311 9.2E-100 T 15-10-2018 IPR007488 Protein of unknown function DUF535 AM378_05845 77112853604de2ec18bf78c0589708f6 303 Pfam PF03466 LysR substrate binding domain 83 286 1.8E-36 T 15-10-2018 IPR005119 LysR, substrate-binding AM378_05845 77112853604de2ec18bf78c0589708f6 303 SUPERFAMILY SSF46785 2 105 1.49E-22 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM378_05845 77112853604de2ec18bf78c0589708f6 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 1 56 5.5E-20 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_05845 77112853604de2ec18bf78c0589708f6 303 Gene3D G3DSA:3.40.190.290 85 286 3.4E-50 T 15-10-2018 AM378_05845 77112853604de2ec18bf78c0589708f6 303 Gene3D G3DSA:1.10.10.10 1 83 1.2E-26 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_05845 77112853604de2ec18bf78c0589708f6 303 SUPERFAMILY SSF53850 84 289 1.96E-38 T 15-10-2018 AM378_15530 b679b940cf7352f4175962e5418332ae 194 Pfam PF12804 MobA-like NTP transferase domain 6 166 9.8E-25 T 15-10-2018 IPR025877 MobA-like NTP transferase AM378_15530 b679b940cf7352f4175962e5418332ae 194 SUPERFAMILY SSF53448 1 190 2.13E-19 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AM378_15530 b679b940cf7352f4175962e5418332ae 194 Gene3D G3DSA:3.90.550.10 2 193 7.8E-37 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AM378_08655 399da06cab37a541402838712d20a2ec 440 Gene3D G3DSA:3.10.450.350 183 282 5.8E-33 T 15-10-2018 AM378_08655 399da06cab37a541402838712d20a2ec 440 SMART SM00257 98 143 9.5E-5 T 15-10-2018 IPR018392 LysM domain AM378_08655 399da06cab37a541402838712d20a2ec 440 Pfam PF01551 Peptidase family M23 313 407 3.2E-34 T 15-10-2018 IPR016047 Peptidase M23 AM378_08655 399da06cab37a541402838712d20a2ec 440 Pfam PF01476 LysM domain 99 142 1.8E-5 T 15-10-2018 IPR018392 LysM domain AM378_08655 399da06cab37a541402838712d20a2ec 440 Gene3D G3DSA:3.10.450.350 87 182 6.5E-12 T 15-10-2018 AM378_08655 399da06cab37a541402838712d20a2ec 440 SUPERFAMILY SSF51261 166 408 1.36E-70 T 15-10-2018 IPR011055 Duplicated hybrid motif AM378_08655 399da06cab37a541402838712d20a2ec 440 Pfam PF08525 Opacity-associated protein A N-terminal motif 12 39 2.4E-8 T 15-10-2018 IPR013731 Opacity-associated protein A, N-terminal AM378_08655 399da06cab37a541402838712d20a2ec 440 Gene3D G3DSA:2.70.70.10 283 413 7.8E-50 T 15-10-2018 IPR011055 Duplicated hybrid motif AM378_15050 c565150048f3effca50448a26b529237 109 Hamap MF_02012 Cell division protein ZapA [zapA]. 1 109 33.802 T 15-10-2018 IPR023771 Cell division protein ZapA, eubacteria AM378_15050 c565150048f3effca50448a26b529237 109 SUPERFAMILY SSF102829 6 94 9.68E-25 T 15-10-2018 IPR036192 Cell division protein ZapA-like superfamily AM378_15050 c565150048f3effca50448a26b529237 109 Pfam PF05164 Cell division protein ZapA 6 90 3.4E-19 T 15-10-2018 IPR007838 Cell division protein ZapA-like AM378_15050 c565150048f3effca50448a26b529237 109 Gene3D G3DSA:1.20.5.50 49 102 4.2E-6 T 15-10-2018 AM378_15050 c565150048f3effca50448a26b529237 109 Gene3D G3DSA:1.10.20.30 1 47 4.1E-26 T 15-10-2018 AM378_12045 98a898816e9d8781753e80553885ede4 238 Gene3D G3DSA:3.40.30.10 67 238 5.5E-46 T 15-10-2018 AM378_12045 98a898816e9d8781753e80553885ede4 238 ProSitePatterns PS00194 Thioredoxin family active site. 89 107 - T 15-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 AM378_12045 98a898816e9d8781753e80553885ede4 238 SUPERFAMILY SSF52833 64 229 2.27E-42 T 15-10-2018 IPR036249 Thioredoxin-like superfamily AM378_12045 98a898816e9d8781753e80553885ede4 238 Pfam PF13462 Thioredoxin 75 229 7.1E-23 T 15-10-2018 IPR012336 Thioredoxin-like fold AM378_01520 af220d7ce5f0b88083ac61217af53f9c 134 Gene3D G3DSA:3.30.720.100 6 69 1.2E-10 T 15-10-2018 AM378_01520 af220d7ce5f0b88083ac61217af53f9c 134 Pfam PF06983 3-demethylubiquinone-9 3-methyltransferase 3 126 2.9E-22 T 15-10-2018 IPR028973 PhnB-like AM378_01520 af220d7ce5f0b88083ac61217af53f9c 134 SUPERFAMILY SSF54593 1 128 1.45E-28 T 15-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AM378_01520 af220d7ce5f0b88083ac61217af53f9c 134 PIRSF PIRSF021700 1 132 2.1E-22 T 15-10-2018 IPR009725 Predicted 3-demethylubiquinone-9 3-methyltransferase AM378_01520 af220d7ce5f0b88083ac61217af53f9c 134 Gene3D G3DSA:3.30.720.110 70 130 1.1E-27 T 15-10-2018 AM378_04435 9f186d36ece742eeba15b7823286fc66 288 SUPERFAMILY SSF56112 8 282 1.75E-39 T 15-10-2018 IPR011009 Protein kinase-like domain superfamily AM378_04435 9f186d36ece742eeba15b7823286fc66 288 Hamap MF_01604 Thiamine kinase [thiK]. 9 281 42.202 T 15-10-2018 IPR014093 Thiamine kinase GO:0006772|GO:0016310|GO:0019165 KEGG: 00730+2.7.1.89|MetaCyc: PWY-6896 AM378_04435 9f186d36ece742eeba15b7823286fc66 288 Pfam PF01636 Phosphotransferase enzyme family 40 235 1.2E-14 T 15-10-2018 IPR002575 Aminoglycoside phosphotransferase AM378_04435 9f186d36ece742eeba15b7823286fc66 288 Gene3D G3DSA:3.90.1200.10 102 288 4.8E-22 T 15-10-2018 AM378_04435 9f186d36ece742eeba15b7823286fc66 288 TIGRFAM TIGR02721 ycfN_thiK: thiamine kinase 28 282 1.4E-90 T 15-10-2018 IPR014093 Thiamine kinase GO:0006772|GO:0016310|GO:0019165 KEGG: 00730+2.7.1.89|MetaCyc: PWY-6896 AM378_14345 31303fa8d58bef757c7406b384336491 150 PRINTS PR00369 Flavodoxin signature 108 127 1.7E-6 T 15-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 AM378_14345 31303fa8d58bef757c7406b384336491 150 PRINTS PR00369 Flavodoxin signature 84 94 1.7E-6 T 15-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 AM378_14345 31303fa8d58bef757c7406b384336491 150 PRINTS PR00369 Flavodoxin signature 53 64 1.7E-6 T 15-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 AM378_14345 31303fa8d58bef757c7406b384336491 150 SUPERFAMILY SSF52218 1 148 2.1E-40 T 15-10-2018 IPR029039 Flavoprotein-like superfamily AM378_14345 31303fa8d58bef757c7406b384336491 150 Pfam PF00258 Flavodoxin 6 132 5.0E-22 T 15-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 AM378_14345 31303fa8d58bef757c7406b384336491 150 Gene3D G3DSA:3.40.50.360 1 149 6.2E-42 T 15-10-2018 IPR029039 Flavoprotein-like superfamily AM378_18090 fa75fd9627e715409032fe7447b97f16 231 SUPERFAMILY SSF51182 1 230 4.7E-80 T 15-10-2018 IPR011051 RmlC-like cupin domain superfamily AM378_18090 fa75fd9627e715409032fe7447b97f16 231 Gene3D G3DSA:2.60.120.10 7 229 1.1E-97 T 15-10-2018 IPR014710 RmlC-like jelly roll fold AM378_18090 fa75fd9627e715409032fe7447b97f16 231 PIRSF PIRSF006232 1 230 5.1E-57 T 15-10-2018 IPR012093 Pirin Reactome: R-HSA-8935690 AM378_18090 fa75fd9627e715409032fe7447b97f16 231 Pfam PF02678 Pirin 8 119 7.0E-38 T 15-10-2018 IPR003829 Pirin, N-terminal domain Reactome: R-HSA-8935690 AM378_18090 fa75fd9627e715409032fe7447b97f16 231 Gene3D G3DSA:2.60.120.10 11 135 1.1E-97 T 15-10-2018 IPR014710 RmlC-like jelly roll fold AM378_13530 e844910490f946eef257639f58377bd0 486 SMART SM00062 44 268 2.2E-36 T 15-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AM378_13530 e844910490f946eef257639f58377bd0 486 SUPERFAMILY SSF53955 254 447 7.51E-37 T 15-10-2018 IPR023346 Lysozyme-like domain superfamily AM378_13530 e844910490f946eef257639f58377bd0 486 Pfam PF01464 Transglycosylase SLT domain 296 402 6.9E-25 T 15-10-2018 IPR008258 Transglycosylase SLT domain 1 AM378_13530 e844910490f946eef257639f58377bd0 486 Gene3D G3DSA:3.40.190.10 38 263 1.2E-62 T 15-10-2018 AM378_13530 e844910490f946eef257639f58377bd0 486 SUPERFAMILY SSF53850 45 267 6.02E-38 T 15-10-2018 AM378_13530 e844910490f946eef257639f58377bd0 486 Hamap MF_02016 Membrane-bound lytic murein transglycosylase F [mltF]. 5 475 49.266 T 15-10-2018 IPR023703 Membrane-bound lytic murein transglycosylase F GO:0016837 AM378_13530 e844910490f946eef257639f58377bd0 486 Gene3D G3DSA:3.40.190.10 129 224 1.2E-62 T 15-10-2018 AM378_13530 e844910490f946eef257639f58377bd0 486 Gene3D G3DSA:1.10.530.10 286 469 1.8E-35 T 15-10-2018 AM378_13530 e844910490f946eef257639f58377bd0 486 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 51 267 3.4E-32 T 15-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AM378_13530 e844910490f946eef257639f58377bd0 486 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 309 337 - T 15-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 AM378_20230 d07529d27d38f43ad26f8d260b8c31dc 399 TIGRFAM TIGR03379 glycerol3P_GlpC: glycerol-3-phosphate dehydrogenase, anaerobic, C subunit 6 398 3.5E-229 T 15-10-2018 IPR017753 Glycerol-3-phosphate dehydrogenase, GlpC subunit GO:0009061|GO:0016020 AM378_20230 d07529d27d38f43ad26f8d260b8c31dc 399 Pfam PF02754 Cysteine-rich domain 296 379 5.3E-14 T 15-10-2018 IPR004017 Cysteine-rich domain AM378_20230 d07529d27d38f43ad26f8d260b8c31dc 399 Pfam PF02754 Cysteine-rich domain 166 252 1.2E-13 T 15-10-2018 IPR004017 Cysteine-rich domain AM378_20230 d07529d27d38f43ad26f8d260b8c31dc 399 Gene3D G3DSA:1.10.1060.10 1 94 6.5E-9 T 15-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 AM378_20230 d07529d27d38f43ad26f8d260b8c31dc 399 Pfam PF13183 4Fe-4S dicluster domain 9 73 6.7E-10 T 15-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AM378_20230 d07529d27d38f43ad26f8d260b8c31dc 399 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 59 70 - T 15-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AM378_20230 d07529d27d38f43ad26f8d260b8c31dc 399 SUPERFAMILY SSF46548 8 87 2.27E-16 T 15-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 AM378_20150 456a4830d2755821fef8fb2135db067c 157 Gene3D G3DSA:2.60.120.10 23 127 1.0E-7 T 15-10-2018 IPR014710 RmlC-like jelly roll fold AM378_20150 456a4830d2755821fef8fb2135db067c 157 SUPERFAMILY SSF51182 28 120 6.37E-15 T 15-10-2018 IPR011051 RmlC-like cupin domain superfamily AM378_20150 456a4830d2755821fef8fb2135db067c 157 TIGRFAM TIGR04366 cupin_WbuC: cupin fold metalloprotein, WbuC family 4 132 3.6E-45 T 15-10-2018 IPR027565 Cupin fold metalloprotein, WbuC family AM378_08090 1cccb05bfba2f633736b62c3502e67a5 520 PRINTS PR00095 Anthranilate synthase component I signature 444 458 9.7E-25 T 15-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AM378_08090 1cccb05bfba2f633736b62c3502e67a5 520 PRINTS PR00095 Anthranilate synthase component I signature 364 377 9.7E-25 T 15-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AM378_08090 1cccb05bfba2f633736b62c3502e67a5 520 PRINTS PR00095 Anthranilate synthase component I signature 350 363 9.7E-25 T 15-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AM378_08090 1cccb05bfba2f633736b62c3502e67a5 520 PRINTS PR00095 Anthranilate synthase component I signature 459 473 9.7E-25 T 15-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AM378_08090 1cccb05bfba2f633736b62c3502e67a5 520 TIGRFAM TIGR00565 trpE_proteo: anthranilate synthase component I 17 515 5.4E-242 T 15-10-2018 IPR005257 Anthranilate synthase component I, TrpE-like, bacterial GO:0004049|GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AM378_08090 1cccb05bfba2f633736b62c3502e67a5 520 Pfam PF00425 chorismate binding enzyme 242 502 1.1E-84 T 15-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal AM378_08090 1cccb05bfba2f633736b62c3502e67a5 520 Pfam PF04715 Anthranilate synthase component I, N terminal region 20 190 7.6E-15 T 15-10-2018 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AM378_08090 1cccb05bfba2f633736b62c3502e67a5 520 PIRSF PIRSF001373 1 520 7.9E-250 T 15-10-2018 IPR005257 Anthranilate synthase component I, TrpE-like, bacterial GO:0004049|GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AM378_08090 1cccb05bfba2f633736b62c3502e67a5 520 Gene3D G3DSA:3.60.120.10 2 520 2.8E-203 T 15-10-2018 IPR005801 ADC synthase GO:0009058 AM378_08090 1cccb05bfba2f633736b62c3502e67a5 520 SUPERFAMILY SSF56322 8 515 1.96E-165 T 15-10-2018 IPR005801 ADC synthase GO:0009058 AM378_21070 46befbc7c964552ef75ee67aa786ae49 141 SUPERFAMILY SSF46785 2 131 9.93E-34 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM378_21070 46befbc7c964552ef75ee67aa786ae49 141 Pfam PF02082 Transcriptional regulator 2 83 1.8E-24 T 15-10-2018 IPR000944 Transcription regulator Rrf2-type AM378_21070 46befbc7c964552ef75ee67aa786ae49 141 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 2 128 2.2E-35 T 15-10-2018 IPR000944 Transcription regulator Rrf2-type AM378_21070 46befbc7c964552ef75ee67aa786ae49 141 Gene3D G3DSA:1.10.10.10 1 136 5.9E-35 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_21070 46befbc7c964552ef75ee67aa786ae49 141 Hamap MF_01177 HTH-type transcriptional repressor NsrR [nsrR]. 1 141 44.725 T 15-10-2018 IPR023761 Transcriptional repressor HTH, NsrR GO:0045892 AM378_05890 bd14cb4a83e97da0fb08e997cfe152c0 154 Pfam PF05433 Glycine zipper 2TM domain 62 102 2.0E-7 T 15-10-2018 IPR008816 Glycine zipper 2TM domain GO:0019867 AM378_07510 1d017cf58cb11ea7a3af568f67356dcb 284 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 1 282 5.2E-101 T 15-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 AM378_07510 1d017cf58cb11ea7a3af568f67356dcb 284 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2. 131 142 - T 15-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 AM378_07510 1d017cf58cb11ea7a3af568f67356dcb 284 Pfam PF01116 Fructose-bisphosphate aldolase class-II 7 282 5.7E-97 T 15-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 AM378_07510 1d017cf58cb11ea7a3af568f67356dcb 284 Gene3D G3DSA:3.20.20.70 2 284 3.0E-106 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM378_07510 1d017cf58cb11ea7a3af568f67356dcb 284 SUPERFAMILY SSF51569 3 283 1.61E-98 T 15-10-2018 AM378_07510 1d017cf58cb11ea7a3af568f67356dcb 284 ProSitePatterns PS00602 Fructose-bisphosphate aldolase class-II signature 1. 73 84 - T 15-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 AM378_07510 1d017cf58cb11ea7a3af568f67356dcb 284 TIGRFAM TIGR01858 tag_bisphos_ald: class II aldolase, tagatose bisphosphate family 4 282 9.0E-146 T 15-10-2018 IPR011288 D-tagatose-bisphosphate aldolase, class II, subunit KbaY/GatY GO:0005975|GO:0008270|GO:0009025 KEGG: 00052+4.1.2.40|MetaCyc: PWY-7077|MetaCyc: PWY-7395 AM378_07510 1d017cf58cb11ea7a3af568f67356dcb 284 PIRSF PIRSF001359 1 284 3.1E-111 T 15-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 AM378_17570 793e9660511a3832eb2c3783b6a2f9bb 124 TIGRFAM TIGR00981 rpsL_bact: ribosomal protein uS12 1 124 3.2E-70 T 15-10-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM378_17570 793e9660511a3832eb2c3783b6a2f9bb 124 SUPERFAMILY SSF50249 3 123 8.57E-52 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold AM378_17570 793e9660511a3832eb2c3783b6a2f9bb 124 Gene3D G3DSA:2.40.50.140 1 124 2.4E-63 T 15-10-2018 AM378_17570 793e9660511a3832eb2c3783b6a2f9bb 124 Pfam PF00164 Ribosomal protein S12/S23 13 123 6.7E-43 T 15-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM378_17570 793e9660511a3832eb2c3783b6a2f9bb 124 PRINTS PR01034 Ribosomal protein S12 signature 110 122 3.5E-60 T 15-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM378_17570 793e9660511a3832eb2c3783b6a2f9bb 124 PRINTS PR01034 Ribosomal protein S12 signature 94 110 3.5E-60 T 15-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM378_17570 793e9660511a3832eb2c3783b6a2f9bb 124 PRINTS PR01034 Ribosomal protein S12 signature 58 77 3.5E-60 T 15-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM378_17570 793e9660511a3832eb2c3783b6a2f9bb 124 PRINTS PR01034 Ribosomal protein S12 signature 27 42 3.5E-60 T 15-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM378_17570 793e9660511a3832eb2c3783b6a2f9bb 124 PRINTS PR01034 Ribosomal protein S12 signature 77 94 3.5E-60 T 15-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM378_17570 793e9660511a3832eb2c3783b6a2f9bb 124 PRINTS PR01034 Ribosomal protein S12 signature 42 57 3.5E-60 T 15-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM378_17570 793e9660511a3832eb2c3783b6a2f9bb 124 PIRSF PIRSF002133 1 124 3.3E-54 T 15-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM378_17570 793e9660511a3832eb2c3783b6a2f9bb 124 Hamap MF_00403_B 30S ribosomal protein S12 [rpsL]. 1 123 38.443 T 15-10-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM378_17570 793e9660511a3832eb2c3783b6a2f9bb 124 ProSitePatterns PS00055 Ribosomal protein S12 signature. 43 50 - T 15-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM378_10395 ad895370b688bbb88d2f3901cc4f5492 123 Pfam PF01042 Endoribonuclease L-PSP 14 122 7.1E-19 T 15-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 AM378_10395 ad895370b688bbb88d2f3901cc4f5492 123 SUPERFAMILY SSF55298 5 122 2.2E-26 T 15-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 AM378_10395 ad895370b688bbb88d2f3901cc4f5492 123 Gene3D G3DSA:3.30.1330.40 3 123 1.3E-24 T 15-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 AM378_16355 cfedcf7e4a40dbc8d9e8080c1ce9ae1f 539 SMART SM00382 366 532 9.3E-11 T 15-10-2018 IPR003593 AAA+ ATPase domain AM378_16355 cfedcf7e4a40dbc8d9e8080c1ce9ae1f 539 SMART SM00382 34 219 1.4E-9 T 15-10-2018 IPR003593 AAA+ ATPase domain AM378_16355 cfedcf7e4a40dbc8d9e8080c1ce9ae1f 539 Pfam PF00005 ABC transporter 36 175 1.5E-16 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM378_16355 cfedcf7e4a40dbc8d9e8080c1ce9ae1f 539 SUPERFAMILY SSF52540 22 228 6.21E-35 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_16355 cfedcf7e4a40dbc8d9e8080c1ce9ae1f 539 SUPERFAMILY SSF52540 360 519 1.98E-32 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_16355 cfedcf7e4a40dbc8d9e8080c1ce9ae1f 539 Gene3D G3DSA:3.40.50.300 296 530 9.8E-36 T 15-10-2018 AM378_16355 cfedcf7e4a40dbc8d9e8080c1ce9ae1f 539 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM378_16355 cfedcf7e4a40dbc8d9e8080c1ce9ae1f 539 Gene3D G3DSA:3.40.50.300 9 275 6.3E-48 T 15-10-2018 AM378_16355 cfedcf7e4a40dbc8d9e8080c1ce9ae1f 539 Pfam PF00005 ABC transporter 366 487 2.2E-16 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM378_22355 fefb0cf3271072bb2f15b9a708ef5ac6 325 TIGRFAM TIGR00338 serB: phosphoserine phosphatase SerB 98 316 1.1E-89 T 15-10-2018 AM378_22355 fefb0cf3271072bb2f15b9a708ef5ac6 325 Pfam PF00702 haloacid dehalogenase-like hydrolase 113 285 3.1E-15 T 15-10-2018 AM378_22355 fefb0cf3271072bb2f15b9a708ef5ac6 325 SUPERFAMILY SSF56784 112 317 9.98E-48 T 15-10-2018 IPR036412 HAD-like superfamily AM378_22355 fefb0cf3271072bb2f15b9a708ef5ac6 325 Gene3D G3DSA:3.30.70.2020 38 320 1.0E-117 T 15-10-2018 AM378_22355 fefb0cf3271072bb2f15b9a708ef5ac6 325 Gene3D G3DSA:1.10.150.210 121 183 1.0E-117 T 15-10-2018 IPR023190 Phosphoserine phosphatase, domain 2 GO:0004647|GO:0006564 KEGG: 00260+3.1.3.3|KEGG: 00680+3.1.3.3|Reactome: R-HSA-977347 AM378_22355 fefb0cf3271072bb2f15b9a708ef5ac6 325 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 113 283 7.0E-23 T 15-10-2018 AM378_22355 fefb0cf3271072bb2f15b9a708ef5ac6 325 Gene3D G3DSA:3.40.50.1000 107 316 1.0E-117 T 15-10-2018 IPR023214 HAD superfamily AM378_19240 dd7fd4f39dfd347b19c32e7d64f75789 487 Hamap MF_01626 Protein ViaA [viaA]. 1 487 55.498 T 15-10-2018 IPR023481 Uncharacterised protein family ViaA AM378_19240 dd7fd4f39dfd347b19c32e7d64f75789 487 SUPERFAMILY SSF53300 322 463 1.61E-17 T 15-10-2018 IPR036465 von Willebrand factor A-like domain superfamily AM378_19240 dd7fd4f39dfd347b19c32e7d64f75789 487 SMART SM00327 323 487 2.1E-7 T 15-10-2018 IPR002035 von Willebrand factor, type A AM378_19240 dd7fd4f39dfd347b19c32e7d64f75789 487 Gene3D G3DSA:3.40.50.410 310 466 6.3E-6 T 15-10-2018 IPR036465 von Willebrand factor A-like domain superfamily AM378_21105 27b8fac818cacd18c251885ad2669233 250 SUPERFAMILY SSF53474 10 249 7.9E-37 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold AM378_21105 27b8fac818cacd18c251885ad2669233 250 Gene3D G3DSA:3.40.50.1820 2 250 4.3E-53 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold AM378_21105 27b8fac818cacd18c251885ad2669233 250 Pfam PF00326 Prolyl oligopeptidase family 97 234 6.5E-10 T 15-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 AM378_09530 e7ffd71a279f00d3e4e04b68148c76f0 330 SUPERFAMILY SSF53686 8 328 3.27E-87 T 15-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme AM378_09530 e7ffd71a279f00d3e4e04b68148c76f0 330 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 16 318 5.0E-53 T 15-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme AM378_09530 e7ffd71a279f00d3e4e04b68148c76f0 330 Hamap MF_01045 D-cysteine desulfhydrase [dcyD]. 2 330 64.144 T 15-10-2018 IPR023702 D-cysteine desulphhydrase, bacterial GO:0019148 KEGG: 00270+4.4.1.15 AM378_09530 e7ffd71a279f00d3e4e04b68148c76f0 330 TIGRFAM TIGR01275 ACC_deam_rel: pyridoxal phosphate-dependent enzymes, D-cysteine desulfhydrase family 13 330 5.4E-129 T 15-10-2018 IPR005966 D-cysteine desulfhydrase GO:0003824 KEGG: 00270+4.4.1.15 AM378_09530 e7ffd71a279f00d3e4e04b68148c76f0 330 PIRSF PIRSF006278 1 330 1.8E-97 T 15-10-2018 IPR027278 1-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase AM378_09530 e7ffd71a279f00d3e4e04b68148c76f0 330 Gene3D G3DSA:3.40.50.1100 51 159 3.2E-121 T 15-10-2018 AM378_09530 e7ffd71a279f00d3e4e04b68148c76f0 330 Gene3D G3DSA:3.40.50.1100 19 324 3.2E-121 T 15-10-2018 AM378_09950 725acb0890ce43c74f83a8ef7f926eae 163 Pfam PF14113 Type VI secretion system (T6SS), amidase effector protein 4 46 160 2.9E-20 T 15-10-2018 IPR025562 Type VI secretion system (T6SS), amidase effector protein 4 AM378_09950 725acb0890ce43c74f83a8ef7f926eae 163 Gene3D G3DSA:2.30.30.1010 73 163 7.0E-38 T 15-10-2018 AM378_01440 1d7f785d3a972e488bb5a178554ea8e7 434 Gene3D G3DSA:1.20.1250.20 228 428 1.2E-37 T 15-10-2018 AM378_01440 1d7f785d3a972e488bb5a178554ea8e7 434 PIRSF PIRSF002808 2 434 9.3E-120 T 15-10-2018 IPR000849 Sugar phosphate transporter GO:0016021|GO:0022857|GO:0055085 AM378_01440 1d7f785d3a972e488bb5a178554ea8e7 434 Gene3D G3DSA:1.20.1250.20 8 212 1.1E-48 T 15-10-2018 AM378_01440 1d7f785d3a972e488bb5a178554ea8e7 434 Pfam PF07690 Major Facilitator Superfamily 25 385 1.3E-45 T 15-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM378_01440 1d7f785d3a972e488bb5a178554ea8e7 434 SUPERFAMILY SSF103473 11 419 2.09E-72 T 15-10-2018 IPR036259 MFS transporter superfamily AM378_04225 1abf2fa00a112c0a6014fca12977fb57 306 PIRSF PIRSF026649 2 306 1.3E-100 T 15-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 AM378_04225 1abf2fa00a112c0a6014fca12977fb57 306 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 5 297 7.0E-106 T 15-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 AM378_04225 1abf2fa00a112c0a6014fca12977fb57 306 TIGRFAM TIGR02207 lipid_A_htrB: lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase 5 306 1.4E-145 T 15-10-2018 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 AM378_04225 1abf2fa00a112c0a6014fca12977fb57 306 Hamap MF_01942 Lipid A biosynthesis lauroyltransferase [lpxL]. 4 306 52.987 T 15-10-2018 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 AM378_11890 7e1a59c8300f3dbf04c6846fc5e498c2 181 PIRSF PIRSF017340 2 171 1.2E-69 T 15-10-2018 IPR024195 NUDIX hydrolase, YfcD, predicted GO:0016817 AM378_11890 7e1a59c8300f3dbf04c6846fc5e498c2 181 SUPERFAMILY SSF55811 11 167 2.84E-34 T 15-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 AM378_11890 7e1a59c8300f3dbf04c6846fc5e498c2 181 Gene3D G3DSA:3.90.79.10 2 177 1.4E-56 T 15-10-2018 AM378_11890 7e1a59c8300f3dbf04c6846fc5e498c2 181 Pfam PF00293 NUDIX domain 37 151 3.7E-19 T 15-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 AM378_22050 35bffa68e33120de6b15be61a62b6ebe 121 Gene3D G3DSA:2.60.120.10 15 117 1.5E-21 T 15-10-2018 IPR014710 RmlC-like jelly roll fold AM378_22050 35bffa68e33120de6b15be61a62b6ebe 121 Pfam PF05899 Protein of unknown function (DUF861) 42 115 1.2E-15 T 15-10-2018 IPR008579 Domain of unknown function DUF861, cupin-3 KEGG: 00230+3.5.3.26|MetaCyc: PWY-5692|MetaCyc: PWY-5698 AM378_22050 35bffa68e33120de6b15be61a62b6ebe 121 SUPERFAMILY SSF51182 26 116 1.32E-15 T 15-10-2018 IPR011051 RmlC-like cupin domain superfamily AM378_10885 ce3b1ae777f5ee62c8a1a949971fa11d 291 SUPERFAMILY SSF52317 8 288 1.59E-55 T 15-10-2018 IPR029062 Class I glutamine amidotransferase-like AM378_10885 ce3b1ae777f5ee62c8a1a949971fa11d 291 PIRSF PIRSF037798 1 291 1.7E-154 T 15-10-2018 IPR017283 Protein/nucleic acid deglycase HchA GO:0036524 AM378_10885 ce3b1ae777f5ee62c8a1a949971fa11d 291 Gene3D G3DSA:3.40.50.880 6 289 4.0E-82 T 15-10-2018 IPR029062 Class I glutamine amidotransferase-like AM378_10885 ce3b1ae777f5ee62c8a1a949971fa11d 291 Pfam PF01965 DJ-1/PfpI family 78 202 4.1E-9 T 15-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 AM378_21850 e0308765527bb4413d6d9d13d0405748 259 SUPERFAMILY SSF52540 8 230 4.38E-61 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_21850 e0308765527bb4413d6d9d13d0405748 259 Gene3D G3DSA:3.40.50.300 6 257 5.7E-57 T 15-10-2018 AM378_21850 e0308765527bb4413d6d9d13d0405748 259 SMART SM00382 38 221 3.0E-14 T 15-10-2018 IPR003593 AAA+ ATPase domain AM378_21850 e0308765527bb4413d6d9d13d0405748 259 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM378_21850 e0308765527bb4413d6d9d13d0405748 259 Pfam PF00005 ABC transporter 29 168 2.6E-27 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM378_05865 6e9890ebcef53e60ae27266eaafaf846 173 Pfam PF00080 Copper/zinc superoxide dismutase (SODC) 35 172 2.0E-29 T 15-10-2018 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 AM378_05865 6e9890ebcef53e60ae27266eaafaf846 173 Gene3D G3DSA:2.60.40.200 20 173 8.8E-52 T 15-10-2018 IPR036423 Superoxide dismutase-like, copper/zinc binding domain superfamily GO:0006801|GO:0046872 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 AM378_05865 6e9890ebcef53e60ae27266eaafaf846 173 ProSitePatterns PS00332 Copper/Zinc superoxide dismutase signature 2. 161 172 - T 15-10-2018 IPR018152 Superoxide dismutase, copper/zinc, binding site GO:0004784|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 AM378_05865 6e9890ebcef53e60ae27266eaafaf846 173 SUPERFAMILY SSF49329 25 173 2.62E-47 T 15-10-2018 IPR036423 Superoxide dismutase-like, copper/zinc binding domain superfamily GO:0006801|GO:0046872 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 AM378_21035 88870ab2fddf695a8f7ab6221a3890a9 313 Gene3D G3DSA:1.10.20.140 119 190 6.6E-106 T 15-10-2018 AM378_21035 88870ab2fddf695a8f7ab6221a3890a9 313 SUPERFAMILY SSF52540 13 158 6.32E-20 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_21035 88870ab2fddf695a8f7ab6221a3890a9 313 Hamap MF_00185 tRNA dimethylallyltransferase [miaA]. 12 312 29.571 T 15-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 AM378_21035 88870ab2fddf695a8f7ab6221a3890a9 313 Pfam PF01715 IPP transferase 46 291 4.1E-84 T 15-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 AM378_21035 88870ab2fddf695a8f7ab6221a3890a9 313 TIGRFAM TIGR00174 miaA: tRNA dimethylallyltransferase 12 300 6.7E-120 T 15-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 AM378_21035 88870ab2fddf695a8f7ab6221a3890a9 313 Gene3D G3DSA:3.40.50.300 16 296 6.6E-106 T 15-10-2018 AM378_13250 9bbcc6613788b74e8f8887712c67b8bf 120 Gene3D G3DSA:1.10.10.10 2 119 2.7E-31 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_13250 9bbcc6613788b74e8f8887712c67b8bf 120 Pfam PF01638 HxlR-like helix-turn-helix 21 106 4.0E-21 T 15-10-2018 IPR002577 Helix-turn-helix, HxlR type AM378_13250 9bbcc6613788b74e8f8887712c67b8bf 120 SUPERFAMILY SSF46785 8 114 2.35E-25 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM378_15285 cbbb1318fa3e06dd1acf47f815962c22 251 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 248 1.2E-55 T 15-10-2018 AM378_15285 cbbb1318fa3e06dd1acf47f815962c22 251 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 8 189 0.0017 T 15-10-2018 AM378_15285 cbbb1318fa3e06dd1acf47f815962c22 251 Gene3D G3DSA:3.40.50.720 3 250 6.2E-71 T 15-10-2018 AM378_15285 cbbb1318fa3e06dd1acf47f815962c22 251 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 145 173 - T 15-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AM378_15285 cbbb1318fa3e06dd1acf47f815962c22 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 3.2E-28 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_15285 cbbb1318fa3e06dd1acf47f815962c22 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 132 148 3.2E-28 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_15285 cbbb1318fa3e06dd1acf47f815962c22 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 3.2E-28 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_15285 cbbb1318fa3e06dd1acf47f815962c22 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 158 177 3.2E-28 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_15285 cbbb1318fa3e06dd1acf47f815962c22 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 179 196 3.2E-28 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_15285 cbbb1318fa3e06dd1acf47f815962c22 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 212 232 3.2E-28 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_15285 cbbb1318fa3e06dd1acf47f815962c22 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 1.6E-9 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_15285 cbbb1318fa3e06dd1acf47f815962c22 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 158 177 1.6E-9 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_15285 cbbb1318fa3e06dd1acf47f815962c22 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 138 146 1.6E-9 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_15285 cbbb1318fa3e06dd1acf47f815962c22 251 SUPERFAMILY SSF51735 6 249 2.17E-68 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily AM378_17915 d6ee90b4ad8322e7d3920896cf864f08 320 Gene3D G3DSA:2.60.260.20 132 215 5.2E-21 T 15-10-2018 AM378_17915 d6ee90b4ad8322e7d3920896cf864f08 320 PRINTS PR00625 DnaJ domain signature 159 178 2.9E-19 T 15-10-2018 IPR001623 DnaJ domain AM378_17915 d6ee90b4ad8322e7d3920896cf864f08 320 PRINTS PR00625 DnaJ domain signature 7 25 2.9E-19 T 15-10-2018 IPR001623 DnaJ domain AM378_17915 d6ee90b4ad8322e7d3920896cf864f08 320 PRINTS PR00625 DnaJ domain signature 25 40 2.9E-19 T 15-10-2018 IPR001623 DnaJ domain AM378_17915 d6ee90b4ad8322e7d3920896cf864f08 320 PRINTS PR00625 DnaJ domain signature 41 61 2.9E-19 T 15-10-2018 IPR001623 DnaJ domain AM378_17915 d6ee90b4ad8322e7d3920896cf864f08 320 Gene3D G3DSA:1.20.5.460 293 320 7.4E-6 T 15-10-2018 AM378_17915 d6ee90b4ad8322e7d3920896cf864f08 320 Pfam PF01556 DnaJ C terminal domain 137 293 6.3E-35 T 15-10-2018 IPR002939 Chaperone DnaJ, C-terminal AM378_17915 d6ee90b4ad8322e7d3920896cf864f08 320 SUPERFAMILY SSF49493 221 303 4.32E-18 T 15-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 AM378_17915 d6ee90b4ad8322e7d3920896cf864f08 320 Gene3D G3DSA:1.10.287.110 2 125 2.4E-32 T 15-10-2018 IPR036869 Chaperone J-domain superfamily AM378_17915 d6ee90b4ad8322e7d3920896cf864f08 320 Gene3D G3DSA:2.60.260.20 216 292 6.6E-29 T 15-10-2018 AM378_17915 d6ee90b4ad8322e7d3920896cf864f08 320 ProSitePatterns PS00636 Nt-dnaJ domain signature. 46 65 - T 15-10-2018 IPR018253 DnaJ domain, conserved site AM378_17915 d6ee90b4ad8322e7d3920896cf864f08 320 SUPERFAMILY SSF49493 132 228 1.22E-17 T 15-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 AM378_17915 d6ee90b4ad8322e7d3920896cf864f08 320 Pfam PF00226 DnaJ domain 5 66 8.6E-23 T 15-10-2018 IPR001623 DnaJ domain AM378_17915 d6ee90b4ad8322e7d3920896cf864f08 320 SMART SM00271 4 61 4.7E-25 T 15-10-2018 IPR001623 DnaJ domain AM378_17915 d6ee90b4ad8322e7d3920896cf864f08 320 SUPERFAMILY SSF46565 1 114 4.58E-27 T 15-10-2018 IPR036869 Chaperone J-domain superfamily AM378_14925 1c11d1a4fa75e3f8e43fe393dc0209ac 308 SUPERFAMILY SSF53613 4 303 7.33E-76 T 15-10-2018 IPR029056 Ribokinase-like AM378_14925 1c11d1a4fa75e3f8e43fe393dc0209ac 308 Gene3D G3DSA:3.40.1190.20 1 301 1.4E-92 T 15-10-2018 IPR029056 Ribokinase-like AM378_14925 1c11d1a4fa75e3f8e43fe393dc0209ac 308 Hamap MF_01987 Ribokinase [rbsK]. 3 303 23.467 T 15-10-2018 IPR011877 Ribokinase GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15|Reactome: R-HSA-71336 AM378_14925 1c11d1a4fa75e3f8e43fe393dc0209ac 308 TIGRFAM TIGR02152 D_ribokin_bact: ribokinase 5 299 1.7E-91 T 15-10-2018 IPR011877 Ribokinase GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15|Reactome: R-HSA-71336 AM378_14925 1c11d1a4fa75e3f8e43fe393dc0209ac 308 Pfam PF00294 pfkB family carbohydrate kinase 4 295 7.0E-64 T 15-10-2018 IPR011611 Carbohydrate kinase PfkB AM378_14925 1c11d1a4fa75e3f8e43fe393dc0209ac 308 PRINTS PR00990 Ribokinase signature 219 230 2.2E-28 T 15-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 AM378_14925 1c11d1a4fa75e3f8e43fe393dc0209ac 308 PRINTS PR00990 Ribokinase signature 7 28 2.2E-28 T 15-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 AM378_14925 1c11d1a4fa75e3f8e43fe393dc0209ac 308 PRINTS PR00990 Ribokinase signature 107 120 2.2E-28 T 15-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 AM378_14925 1c11d1a4fa75e3f8e43fe393dc0209ac 308 PRINTS PR00990 Ribokinase signature 34 53 2.2E-28 T 15-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 AM378_14925 1c11d1a4fa75e3f8e43fe393dc0209ac 308 PRINTS PR00990 Ribokinase signature 175 190 2.2E-28 T 15-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 AM378_14925 1c11d1a4fa75e3f8e43fe393dc0209ac 308 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 248 261 - T 15-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 AM378_19345 3912178b24841d614611ecb94a106067 244 Gene3D G3DSA:1.20.58.220 1 117 2.2E-42 T 15-10-2018 IPR038078 PhoU-like domain superfamily AM378_19345 3912178b24841d614611ecb94a106067 244 Pfam PF01895 PhoU domain 26 111 6.5E-22 T 15-10-2018 IPR026022 PhoU domain AM378_19345 3912178b24841d614611ecb94a106067 244 Pfam PF01895 PhoU domain 128 212 5.0E-17 T 15-10-2018 IPR026022 PhoU domain AM378_19345 3912178b24841d614611ecb94a106067 244 PIRSF PIRSF003107 7 226 4.7E-68 T 15-10-2018 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 AM378_19345 3912178b24841d614611ecb94a106067 244 SUPERFAMILY SSF109755 13 228 5.23E-70 T 15-10-2018 AM378_19345 3912178b24841d614611ecb94a106067 244 Gene3D G3DSA:1.20.58.220 119 233 3.0E-32 T 15-10-2018 IPR038078 PhoU-like domain superfamily AM378_19345 3912178b24841d614611ecb94a106067 244 TIGRFAM TIGR02135 phoU_full: phosphate transport system regulatory protein PhoU 13 221 1.9E-73 T 15-10-2018 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 AM378_06430 6c0ca32769caa4395761e74e50ed5967 247 Pfam PF00106 short chain dehydrogenase 7 199 3.3E-54 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_06430 6c0ca32769caa4395761e74e50ed5967 247 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 7 191 4.4E-5 T 15-10-2018 AM378_06430 6c0ca32769caa4395761e74e50ed5967 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 1.5E-24 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_06430 6c0ca32769caa4395761e74e50ed5967 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 1.5E-24 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_06430 6c0ca32769caa4395761e74e50ed5967 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 1.5E-24 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_06430 6c0ca32769caa4395761e74e50ed5967 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 1.5E-24 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_06430 6c0ca32769caa4395761e74e50ed5967 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 1.5E-24 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_06430 6c0ca32769caa4395761e74e50ed5967 247 SUPERFAMILY SSF51735 1 231 1.89E-65 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily AM378_06430 6c0ca32769caa4395761e74e50ed5967 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 2.3E-8 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_06430 6c0ca32769caa4395761e74e50ed5967 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 2.3E-8 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_06430 6c0ca32769caa4395761e74e50ed5967 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 156 175 2.3E-8 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_06430 6c0ca32769caa4395761e74e50ed5967 247 Gene3D G3DSA:3.40.50.720 1 245 2.0E-66 T 15-10-2018 AM378_06430 6c0ca32769caa4395761e74e50ed5967 247 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 143 171 - T 15-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AM378_13035 50fbe79d04b04cd58513e5afd40a9b1e 477 SUPERFAMILY SSF161093 305 476 7.19E-49 T 15-10-2018 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily GO:0006812|GO:0008324 AM378_13035 50fbe79d04b04cd58513e5afd40a9b1e 477 SMART SM00924 61 164 2.1E-31 T 15-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain AM378_13035 50fbe79d04b04cd58513e5afd40a9b1e 477 Gene3D G3DSA:1.25.60.10 42 159 2.8E-16 T 15-10-2018 IPR038076 MgtE, N-terminal domain superfamily AM378_13035 50fbe79d04b04cd58513e5afd40a9b1e 477 SUPERFAMILY SSF158791 51 159 1.7E-22 T 15-10-2018 AM378_13035 50fbe79d04b04cd58513e5afd40a9b1e 477 Gene3D G3DSA:3.10.580.10 160 287 4.8E-38 T 15-10-2018 AM378_13035 50fbe79d04b04cd58513e5afd40a9b1e 477 Pfam PF00571 CBS domain 228 282 1.3E-6 T 15-10-2018 IPR000644 CBS domain AM378_13035 50fbe79d04b04cd58513e5afd40a9b1e 477 Pfam PF03448 MgtE intracellular N domain 61 162 2.5E-22 T 15-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain AM378_13035 50fbe79d04b04cd58513e5afd40a9b1e 477 SMART SM00116 235 283 0.0063 T 15-10-2018 IPR000644 CBS domain AM378_13035 50fbe79d04b04cd58513e5afd40a9b1e 477 TIGRFAM TIGR00400 mgtE: magnesium transporter 51 476 5.7E-79 T 15-10-2018 IPR006669 Magnesium transporter MgtE GO:0015095|GO:0015693|GO:0016020 AM378_13035 50fbe79d04b04cd58513e5afd40a9b1e 477 Pfam PF01769 Divalent cation transporter 348 469 7.8E-25 T 15-10-2018 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 AM378_13035 50fbe79d04b04cd58513e5afd40a9b1e 477 SUPERFAMILY SSF54631 164 303 6.86E-26 T 15-10-2018 AM378_13035 50fbe79d04b04cd58513e5afd40a9b1e 477 Gene3D G3DSA:1.10.357.20 303 476 2.2E-47 T 15-10-2018 IPR038048 Magnesium transporter MgtE, transmembrane domain AM378_10330 d08759107ab65a4d263450fcff4a5b5d 252 Pfam PF05138 Phenylacetic acid catabolic protein 5 252 6.2E-94 T 15-10-2018 IPR007814 1,2-phenylacetyl-CoA epoxidase, subunit A/C GO:0010124 AM378_10330 d08759107ab65a4d263450fcff4a5b5d 252 Gene3D G3DSA:1.20.1260.10 2 252 2.4E-98 T 15-10-2018 IPR012347 Ferritin-like AM378_10330 d08759107ab65a4d263450fcff4a5b5d 252 SUPERFAMILY SSF47240 6 246 1.3E-79 T 15-10-2018 IPR009078 Ferritin-like superfamily AM378_10330 d08759107ab65a4d263450fcff4a5b5d 252 TIGRFAM TIGR02158 PA_CoA_Oxy3: phenylacetate-CoA oxygenase, PaaI subunit 15 252 2.4E-93 T 15-10-2018 IPR011882 1,2-phenylacetyl-CoA epoxidase, subunit C GO:0010124 AM378_10330 d08759107ab65a4d263450fcff4a5b5d 252 PIRSF PIRSF037834 1 252 1.0E-93 T 15-10-2018 IPR011882 1,2-phenylacetyl-CoA epoxidase, subunit C GO:0010124 AM378_22285 e6c8f958bd447909ecbe4506f3fd75e0 147 Gene3D G3DSA:3.40.630.30 1 147 4.3E-47 T 15-10-2018 AM378_22285 e6c8f958bd447909ecbe4506f3fd75e0 147 Pfam PF00583 Acetyltransferase (GNAT) family 18 120 1.6E-18 T 15-10-2018 IPR000182 GNAT domain AM378_22285 e6c8f958bd447909ecbe4506f3fd75e0 147 TIGRFAM TIGR01575 rimI: ribosomal-protein-alanine acetyltransferase 12 142 1.5E-43 T 15-10-2018 IPR006464 N-acetyltransferase RimI/Ard1 GO:0006474|GO:0016407 AM378_22285 e6c8f958bd447909ecbe4506f3fd75e0 147 SUPERFAMILY SSF55729 3 146 1.93E-32 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase AM378_03380 21ae8fc5802b40e800aa4bbddf380a9a 759 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 517 535 - T 15-10-2018 IPR028299 ClpA/B, conserved site 2 AM378_03380 21ae8fc5802b40e800aa4bbddf380a9a 759 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 652 732 8.4E-24 T 15-10-2018 IPR019489 Clp ATPase, C-terminal AM378_03380 21ae8fc5802b40e800aa4bbddf380a9a 759 SMART SM00382 486 653 1.8E-6 T 15-10-2018 IPR003593 AAA+ ATPase domain AM378_03380 21ae8fc5802b40e800aa4bbddf380a9a 759 SMART SM00382 205 349 2.1E-13 T 15-10-2018 IPR003593 AAA+ ATPase domain AM378_03380 21ae8fc5802b40e800aa4bbddf380a9a 759 SUPERFAMILY SSF52540 436 742 8.56E-77 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_03380 21ae8fc5802b40e800aa4bbddf380a9a 759 Gene3D G3DSA:1.10.8.60 652 757 1.2E-33 T 15-10-2018 AM378_03380 21ae8fc5802b40e800aa4bbddf380a9a 759 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 210 341 5.0E-13 T 15-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AM378_03380 21ae8fc5802b40e800aa4bbddf380a9a 759 Pfam PF07724 AAA domain (Cdc48 subfamily) 485 646 1.2E-49 T 15-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AM378_03380 21ae8fc5802b40e800aa4bbddf380a9a 759 Gene3D G3DSA:3.40.50.300 157 349 9.1E-64 T 15-10-2018 AM378_03380 21ae8fc5802b40e800aa4bbddf380a9a 759 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 561 579 1.2E-36 T 15-10-2018 IPR001270 ClpA/B family GO:0005524 AM378_03380 21ae8fc5802b40e800aa4bbddf380a9a 759 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 594 608 1.2E-36 T 15-10-2018 IPR001270 ClpA/B family GO:0005524 AM378_03380 21ae8fc5802b40e800aa4bbddf380a9a 759 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 490 508 1.2E-36 T 15-10-2018 IPR001270 ClpA/B family GO:0005524 AM378_03380 21ae8fc5802b40e800aa4bbddf380a9a 759 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 532 550 1.2E-36 T 15-10-2018 IPR001270 ClpA/B family GO:0005524 AM378_03380 21ae8fc5802b40e800aa4bbddf380a9a 759 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 301 313 - T 15-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 AM378_03380 21ae8fc5802b40e800aa4bbddf380a9a 759 SMART SM01086 652 743 6.3E-35 T 15-10-2018 IPR019489 Clp ATPase, C-terminal AM378_03380 21ae8fc5802b40e800aa4bbddf380a9a 759 TIGRFAM TIGR02639 ClpA: ATP-dependent Clp protease ATP-binding subunit ClpA 3 733 0.0 T 15-10-2018 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA GO:0016887|GO:0043335 AM378_03380 21ae8fc5802b40e800aa4bbddf380a9a 759 SUPERFAMILY SSF52540 168 424 1.26E-68 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_03380 21ae8fc5802b40e800aa4bbddf380a9a 759 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 13 62 5.1E-15 T 15-10-2018 IPR004176 Clp, N-terminal AM378_03380 21ae8fc5802b40e800aa4bbddf380a9a 759 Gene3D G3DSA:1.10.8.60 350 437 2.8E-35 T 15-10-2018 AM378_03380 21ae8fc5802b40e800aa4bbddf380a9a 759 SUPERFAMILY SSF81923 1 141 1.96E-58 T 15-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 AM378_03380 21ae8fc5802b40e800aa4bbddf380a9a 759 Gene3D G3DSA:3.40.50.300 438 651 2.0E-78 T 15-10-2018 AM378_03380 21ae8fc5802b40e800aa4bbddf380a9a 759 Gene3D G3DSA:1.10.1780.10 1 143 7.5E-45 T 15-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 AM378_02200 bc4df76f40161a7682c281b30f040a4f 336 PIRSF PIRSF029038 15 335 8.5E-154 T 15-10-2018 IPR016909 Ribosomal RNA large subunit methyltransferase F GO:0005737|GO:0006364|GO:0008988 AM378_02200 bc4df76f40161a7682c281b30f040a4f 336 Gene3D G3DSA:3.40.50.150 60 323 1.4E-77 T 15-10-2018 AM378_02200 bc4df76f40161a7682c281b30f040a4f 336 SUPERFAMILY SSF53335 63 323 2.41E-27 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM378_02200 bc4df76f40161a7682c281b30f040a4f 336 Hamap MF_01848 Ribosomal RNA large subunit methyltransferase F [rlmF]. 26 325 54.549 T 15-10-2018 IPR016909 Ribosomal RNA large subunit methyltransferase F GO:0005737|GO:0006364|GO:0008988 AM378_02200 bc4df76f40161a7682c281b30f040a4f 336 Pfam PF05971 Protein of unknown function (DUF890) 25 323 6.4E-128 T 15-10-2018 IPR010286 Ribosomal RNA large subunit methyltransferase F-like GO:0008168 AM378_09425 4b4a3cb6465b78927a8e0d9dbea71174 380 Gene3D G3DSA:3.40.50.300 269 379 7.0E-7 T 15-10-2018 AM378_09425 4b4a3cb6465b78927a8e0d9dbea71174 380 Gene3D G3DSA:3.40.50.300 2 92 6.7E-6 T 15-10-2018 AM378_09425 4b4a3cb6465b78927a8e0d9dbea71174 380 SUPERFAMILY SSF52540 4 363 2.36E-32 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_09425 4b4a3cb6465b78927a8e0d9dbea71174 380 Pfam PF13245 AAA domain 4 195 9.0E-9 T 15-10-2018 AM378_09425 4b4a3cb6465b78927a8e0d9dbea71174 380 Gene3D G3DSA:3.40.50.300 117 248 8.7E-12 T 15-10-2018 AM378_00110 994ad54ccc02c10306ce98a473014280 489 TIGRFAM TIGR02533 type_II_gspE: type II secretion system protein E 1 481 4.3E-207 T 15-10-2018 IPR013369 Type II secretion system GspE GO:0005524|GO:0008565|GO:0015627|GO:0015628 AM378_00110 994ad54ccc02c10306ce98a473014280 489 SMART SM00382 237 363 7.8E-8 T 15-10-2018 IPR003593 AAA+ ATPase domain AM378_00110 994ad54ccc02c10306ce98a473014280 489 SUPERFAMILY SSF52540 92 481 1.58E-100 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_00110 994ad54ccc02c10306ce98a473014280 489 Gene3D G3DSA:3.30.300.160 1 77 3.2E-10 T 15-10-2018 AM378_00110 994ad54ccc02c10306ce98a473014280 489 Gene3D G3DSA:3.40.50.300 212 484 1.7E-116 T 15-10-2018 AM378_00110 994ad54ccc02c10306ce98a473014280 489 Gene3D G3DSA:3.30.450.90 78 209 1.8E-52 T 15-10-2018 AM378_00110 994ad54ccc02c10306ce98a473014280 489 Pfam PF00437 Type II/IV secretion system protein 111 376 1.1E-90 T 15-10-2018 IPR001482 Type II/IV secretion system protein AM378_00110 994ad54ccc02c10306ce98a473014280 489 SUPERFAMILY SSF160246 1 63 7.59E-13 T 15-10-2018 IPR037257 General secretory system II, protein E, N-terminal superfamily AM378_00110 994ad54ccc02c10306ce98a473014280 489 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 304 318 - T 15-10-2018 IPR001482 Type II/IV secretion system protein AM378_14780 0beafd4eb9252c14a6521697285291a9 198 Pfam PF00440 Bacterial regulatory proteins, tetR family 14 59 2.7E-11 T 15-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM378_14780 0beafd4eb9252c14a6521697285291a9 198 TIGRFAM TIGR03384 betaine_BetI: transcriptional repressor BetI 5 190 1.9E-67 T 15-10-2018 IPR017757 Transcriptional repressor BetI AM378_14780 0beafd4eb9252c14a6521697285291a9 198 ProSitePatterns PS01081 TetR-type HTH domain signature. 26 57 - T 15-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site AM378_14780 0beafd4eb9252c14a6521697285291a9 198 Hamap MF_00768 HTH-type transcriptional regulator BetI [betI]. 1 197 85.732 T 15-10-2018 IPR017757 Transcriptional repressor BetI AM378_14780 0beafd4eb9252c14a6521697285291a9 198 Pfam PF13977 BetI-type transcriptional repressor, C-terminal 85 187 1.0E-27 T 15-10-2018 IPR039538 BetI-type transcriptional repressor, C-terminal AM378_14780 0beafd4eb9252c14a6521697285291a9 198 Gene3D G3DSA:1.10.357.10 1 197 6.0E-45 T 15-10-2018 AM378_14780 0beafd4eb9252c14a6521697285291a9 198 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 14 27 5.0E-5 T 15-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM378_14780 0beafd4eb9252c14a6521697285291a9 198 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 35 58 5.0E-5 T 15-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM378_14780 0beafd4eb9252c14a6521697285291a9 198 SUPERFAMILY SSF48498 85 187 4.89E-16 T 15-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AM378_14780 0beafd4eb9252c14a6521697285291a9 198 SUPERFAMILY SSF46689 2 79 7.7E-17 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AM378_00520 4be191a83956d5524021e832fb2185d7 174 Hamap MF_01929 N5-carboxyaminoimidazole ribonucleotide mutase [purE]. 15 168 31.97 T 15-10-2018 IPR033747 Class I PurE AM378_00520 4be191a83956d5524021e832fb2185d7 174 TIGRFAM TIGR01162 purE: phosphoribosylaminoimidazole carboxylase, catalytic subunit 15 169 8.5E-65 T 15-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 AM378_00520 4be191a83956d5524021e832fb2185d7 174 SUPERFAMILY SSF52255 14 172 1.83E-65 T 15-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 AM378_00520 4be191a83956d5524021e832fb2185d7 174 Pfam PF00731 AIR carboxylase 14 162 5.6E-63 T 15-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 AM378_00520 4be191a83956d5524021e832fb2185d7 174 Gene3D G3DSA:3.40.50.7700 1 174 2.4E-76 T 15-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 AM378_00520 4be191a83956d5524021e832fb2185d7 174 SMART SM01001 13 164 3.1E-100 T 15-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 AM378_00520 4be191a83956d5524021e832fb2185d7 174 PIRSF PIRSF001338 10 173 1.6E-65 T 15-10-2018 IPR024694 PurE, prokaryotic type GO:0006189 KEGG: 00230+5.4.99.18|MetaCyc: PWY-6123|MetaCyc: PWY-7234 AM378_20960 626bd5f4c4cc2f4902b5ccdb249e9b4d 244 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 11 229 2.3E-96 T 15-10-2018 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 AM378_20960 626bd5f4c4cc2f4902b5ccdb249e9b4d 244 Pfam PF13183 4Fe-4S dicluster domain 146 219 8.3E-12 T 15-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AM378_20960 626bd5f4c4cc2f4902b5ccdb249e9b4d 244 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 58 66 - T 15-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 AM378_20960 626bd5f4c4cc2f4902b5ccdb249e9b4d 244 Gene3D G3DSA:1.10.1060.10 107 244 6.1E-52 T 15-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 AM378_20960 626bd5f4c4cc2f4902b5ccdb249e9b4d 244 SUPERFAMILY SSF54292 3 106 5.58E-29 T 15-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 AM378_20960 626bd5f4c4cc2f4902b5ccdb249e9b4d 244 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 149 160 - T 15-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AM378_20960 626bd5f4c4cc2f4902b5ccdb249e9b4d 244 Gene3D G3DSA:3.10.20.30 3 106 2.0E-33 T 15-10-2018 IPR012675 Beta-grasp domain superfamily AM378_20960 626bd5f4c4cc2f4902b5ccdb249e9b4d 244 SUPERFAMILY SSF46548 107 229 4.01E-31 T 15-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 AM378_20960 626bd5f4c4cc2f4902b5ccdb249e9b4d 244 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 8 111 6.7E-31 T 15-10-2018 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 AM378_03110 b21fc0b3b00601468e5f9b579459543d 371 Gene3D G3DSA:3.40.980.20 205 364 9.3E-13 T 15-10-2018 AM378_03110 b21fc0b3b00601468e5f9b579459543d 371 Pfam PF17042 Putative nucleotide-binding of sugar-metabolising enzyme 216 355 4.0E-16 T 15-10-2018 IPR031475 Four-carbon acid sugar kinase, C-terminal domain AM378_03110 b21fc0b3b00601468e5f9b579459543d 371 SUPERFAMILY SSF142764 2 362 4.84E-72 T 15-10-2018 AM378_03110 b21fc0b3b00601468e5f9b579459543d 371 Pfam PF07005 Putative sugar-binding N-terminal domain 2 149 6.5E-33 T 15-10-2018 IPR010737 Four-carbon acid sugar kinase, N-terminal domain AM378_03110 b21fc0b3b00601468e5f9b579459543d 371 Gene3D G3DSA:3.40.50.10840 1 201 6.0E-44 T 15-10-2018 IPR037051 Four-carbon acid sugar kinase, N-terminal domain superfamily AM378_18655 cb373cb2835a98a1b7049d9d47e66f62 406 SUPERFAMILY SSF69864 177 404 2.88E-88 T 15-10-2018 AM378_18655 cb373cb2835a98a1b7049d9d47e66f62 406 Hamap MF_00005 Argininosuccinate synthase [argG]. 6 403 51.16 T 15-10-2018 IPR023434 Argininosuccinate synthase, type 1 subfamily GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 AM378_18655 cb373cb2835a98a1b7049d9d47e66f62 406 Gene3D G3DSA:1.20.5.470 369 404 2.5E-7 T 15-10-2018 AM378_18655 cb373cb2835a98a1b7049d9d47e66f62 406 ProSitePatterns PS00564 Argininosuccinate synthase signature 1. 12 20 - T 15-10-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 AM378_18655 cb373cb2835a98a1b7049d9d47e66f62 406 TIGRFAM TIGR00032 argG: argininosuccinate synthase 8 396 9.2E-136 T 15-10-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 AM378_18655 cb373cb2835a98a1b7049d9d47e66f62 406 Pfam PF00764 Arginosuccinate synthase 10 397 1.2E-143 T 15-10-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 AM378_18655 cb373cb2835a98a1b7049d9d47e66f62 406 Gene3D G3DSA:3.40.50.620 9 178 2.6E-145 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM378_18655 cb373cb2835a98a1b7049d9d47e66f62 406 ProSitePatterns PS00565 Argininosuccinate synthase signature 2. 122 133 - T 15-10-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 AM378_18655 cb373cb2835a98a1b7049d9d47e66f62 406 Gene3D G3DSA:3.90.1260.10 69 357 2.6E-145 T 15-10-2018 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 AM378_18655 cb373cb2835a98a1b7049d9d47e66f62 406 SUPERFAMILY SSF52402 7 172 9.04E-46 T 15-10-2018 AM378_10705 8aad27784a6453140f169c7944d87d3a 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.6E-7 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_10705 8aad27784a6453140f169c7944d87d3a 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.6E-7 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_10705 8aad27784a6453140f169c7944d87d3a 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.6E-7 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_10705 8aad27784a6453140f169c7944d87d3a 307 Pfam PF03466 LysR substrate binding domain 88 290 5.9E-29 T 15-10-2018 IPR005119 LysR, substrate-binding AM378_10705 8aad27784a6453140f169c7944d87d3a 307 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 9.7E-22 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_10705 8aad27784a6453140f169c7944d87d3a 307 SUPERFAMILY SSF46785 1 86 2.43E-23 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM378_10705 8aad27784a6453140f169c7944d87d3a 307 Gene3D G3DSA:3.40.190.10 92 279 1.5E-24 T 15-10-2018 AM378_10705 8aad27784a6453140f169c7944d87d3a 307 Gene3D G3DSA:1.10.10.10 1 91 2.1E-27 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_10705 8aad27784a6453140f169c7944d87d3a 307 SUPERFAMILY SSF53850 89 295 2.17E-28 T 15-10-2018 AM378_10705 8aad27784a6453140f169c7944d87d3a 307 Gene3D G3DSA:3.40.190.10 165 267 1.5E-24 T 15-10-2018 AM378_19075 a625558a3cdd841c20b11d233596b114 145 Gene3D G3DSA:3.50.80.10 1 145 1.1E-55 T 15-10-2018 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily AM378_19075 a625558a3cdd841c20b11d233596b114 145 Hamap MF_00518 D-aminoacyl-tRNA deacylase [dtd]. 1 145 34.607 T 15-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 AM378_19075 a625558a3cdd841c20b11d233596b114 145 SUPERFAMILY SSF69500 1 144 7.19E-56 T 15-10-2018 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily AM378_19075 a625558a3cdd841c20b11d233596b114 145 TIGRFAM TIGR00256 TIGR00256: D-tyrosyl-tRNA(Tyr) deacylase 1 145 2.6E-68 T 15-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 AM378_19075 a625558a3cdd841c20b11d233596b114 145 Pfam PF02580 D-Tyr-tRNA(Tyr) deacylase 3 143 2.1E-52 T 15-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 AM378_22655 ee8ee77ec95b668aa176bbf99e2791c0 433 SUPERFAMILY SSF109998 25 200 3.27E-45 T 15-10-2018 IPR027304 Trigger factor/SurA domain superfamily AM378_22655 ee8ee77ec95b668aa176bbf99e2791c0 433 Pfam PF00639 PPIC-type PPIASE domain 178 272 4.9E-20 T 15-10-2018 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0003755 AM378_22655 ee8ee77ec95b668aa176bbf99e2791c0 433 Gene3D G3DSA:1.10.4030.10 21 148 1.2E-44 T 15-10-2018 AM378_22655 ee8ee77ec95b668aa176bbf99e2791c0 433 SUPERFAMILY SSF54534 283 385 2.49E-31 T 15-10-2018 AM378_22655 ee8ee77ec95b668aa176bbf99e2791c0 433 SUPERFAMILY SSF54534 173 276 8.5E-29 T 15-10-2018 AM378_22655 ee8ee77ec95b668aa176bbf99e2791c0 433 Pfam PF13616 PPIC-type PPIASE domain 282 383 9.9E-25 T 15-10-2018 AM378_22655 ee8ee77ec95b668aa176bbf99e2791c0 433 Gene3D G3DSA:3.10.50.40 283 385 6.8E-85 T 15-10-2018 AM378_22655 ee8ee77ec95b668aa176bbf99e2791c0 433 Hamap MF_01183 Chaperone SurA [surA]. 9 428 34.494 T 15-10-2018 IPR023034 Peptidyl-prolyl isomerase SurA GO:0003755|GO:0006457|GO:0030288|GO:0042277|GO:0043165|GO:0050821|GO:0051082|GO:0060274 AM378_22655 ee8ee77ec95b668aa176bbf99e2791c0 433 Pfam PF09312 SurA N-terminal domain 25 142 5.2E-45 T 15-10-2018 IPR015391 SurA N-terminal AM378_22655 ee8ee77ec95b668aa176bbf99e2791c0 433 Gene3D G3DSA:3.10.50.40 175 386 6.8E-85 T 15-10-2018 AM378_24215 d21cb351d425a2bce36568f4cfa23f21 615 Gene3D G3DSA:3.30.1360.200 278 431 6.0E-51 T 15-10-2018 AM378_24215 d21cb351d425a2bce36568f4cfa23f21 615 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 123 601 9.2E-153 T 15-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 AM378_24215 d21cb351d425a2bce36568f4cfa23f21 615 Pfam PF02355 Protein export membrane protein 433 601 1.6E-16 T 15-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial AM378_24215 d21cb351d425a2bce36568f4cfa23f21 615 Pfam PF07549 SecD/SecF GG Motif 119 140 3.7E-6 T 15-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site AM378_24215 d21cb351d425a2bce36568f4cfa23f21 615 SUPERFAMILY SSF82866 410 606 2.35E-41 T 15-10-2018 AM378_24215 d21cb351d425a2bce36568f4cfa23f21 615 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 345 594 2.0E-83 T 15-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial AM378_24215 d21cb351d425a2bce36568f4cfa23f21 615 Pfam PF13721 SecD export protein N-terminal TM region 2 103 2.2E-37 T 15-10-2018 IPR027398 SecD export protein N-terminal TM domain AM378_24215 d21cb351d425a2bce36568f4cfa23f21 615 Gene3D G3DSA:3.30.70.3400 219 437 6.0E-51 T 15-10-2018 AM378_24215 d21cb351d425a2bce36568f4cfa23f21 615 Gene3D G3DSA:3.30.70.3400 123 206 1.0E-5 T 15-10-2018 AM378_24215 d21cb351d425a2bce36568f4cfa23f21 615 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 3 615 48.912 T 15-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 AM378_00020 edfbc6426f46c720a319d0c8fa5d6cde 232 Gene3D G3DSA:3.40.50.620 1 232 1.4E-83 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM378_00020 edfbc6426f46c720a319d0c8fa5d6cde 232 PIRSF PIRSF006293 1 226 2.1E-84 T 15-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 AM378_00020 edfbc6426f46c720a319d0c8fa5d6cde 232 Hamap MF_01633 7-cyano-7-deazaguanine synthase [queC]. 2 220 50.435 T 15-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 AM378_00020 edfbc6426f46c720a319d0c8fa5d6cde 232 Pfam PF06508 Queuosine biosynthesis protein QueC 3 214 4.8E-82 T 15-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 AM378_00020 edfbc6426f46c720a319d0c8fa5d6cde 232 TIGRFAM TIGR00364 TIGR00364: queuosine biosynthesis protein QueC 4 207 8.2E-85 T 15-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 AM378_00020 edfbc6426f46c720a319d0c8fa5d6cde 232 SUPERFAMILY SSF52402 1 216 1.65E-65 T 15-10-2018 AM378_09255 cd5c68dc6d7e9cd10223e5d4c76d2973 231 Pfam PF04752 ChaC-like protein 47 215 1.3E-50 T 15-10-2018 IPR006840 Glutathione-specific gamma-glutamylcyclotransferase GO:0003839|GO:0006751 KEGG: 00480+4.3.2.7|MetaCyc: PWY-7942|Reactome: R-HSA-174403 AM378_09255 cd5c68dc6d7e9cd10223e5d4c76d2973 231 SUPERFAMILY SSF110857 47 161 3.27E-11 T 15-10-2018 IPR036568 Gamma-glutamyl cyclotransferase-like superfamily AM378_09255 cd5c68dc6d7e9cd10223e5d4c76d2973 231 Gene3D G3DSA:3.10.490.10 31 221 5.5E-15 T 15-10-2018 AM378_22165 41a21a501be06a38fd8b757b531b5ae4 520 Pfam PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal 288 489 2.3E-64 T 15-10-2018 IPR024719 HpaB/PvcC/4-BUDH C-terminal AM378_22165 41a21a501be06a38fd8b757b531b5ae4 520 Gene3D G3DSA:2.40.110.10 152 282 1.4E-39 T 15-10-2018 AM378_22165 41a21a501be06a38fd8b757b531b5ae4 520 Gene3D G3DSA:1.10.3140.10 14 151 4.3E-44 T 15-10-2018 AM378_22165 41a21a501be06a38fd8b757b531b5ae4 520 TIGRFAM TIGR02310 HpaB-2: 4-hydroxyphenylacetate 3-monooxygenase, oxygenase component 2 520 0.0 T 15-10-2018 IPR012688 4-HPA 3-monooxygenase large component, gammaproteobacteria GO:0010124|GO:0016712|GO:0050660 KEGG: 00350+1.14.14.9|MetaCyc: PWY-7431 AM378_22165 41a21a501be06a38fd8b757b531b5ae4 520 SUPERFAMILY SSF47203 272 493 4.18E-45 T 15-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 AM378_22165 41a21a501be06a38fd8b757b531b5ae4 520 Gene3D G3DSA:1.20.140.10 288 478 1.9E-65 T 15-10-2018 AM378_22165 41a21a501be06a38fd8b757b531b5ae4 520 PIRSF PIRSF000331 11 501 7.2E-197 T 15-10-2018 IPR004925 HpaB/PvcC/4-BUDH AM378_22165 41a21a501be06a38fd8b757b531b5ae4 520 Pfam PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal 15 281 3.5E-93 T 15-10-2018 IPR024674 HpaB/PvcC/4-BUDH N-terminal AM378_22165 41a21a501be06a38fd8b757b531b5ae4 520 PIRSF PIRSF500125 1 518 2.8E-282 T 15-10-2018 IPR024677 4-HPA 3-monooxygenase large component/Pyoverdin chromophore biosynthetic protein AM378_22165 41a21a501be06a38fd8b757b531b5ae4 520 SUPERFAMILY SSF56645 13 282 4.4E-82 T 15-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 AM378_12995 3fb1c8bc7d1e323bbb2b62eac3371207 484 Gene3D G3DSA:3.40.50.450 275 444 1.8E-5 T 15-10-2018 AM378_12995 3fb1c8bc7d1e323bbb2b62eac3371207 484 Pfam PF13289 SIR2-like domain 105 233 2.2E-29 T 15-10-2018 IPR039444 SIR2-like domain AM378_12995 3fb1c8bc7d1e323bbb2b62eac3371207 484 SUPERFAMILY SSF52467 19 208 5.61E-10 T 15-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily AM378_21600 47817b10f5a2428221d89282454bf170 797 Gene3D G3DSA:3.30.379.10 17 158 3.2E-22 T 15-10-2018 IPR029018 Beta-hexosaminidase-like, domain 2 AM378_21600 47817b10f5a2428221d89282454bf170 797 SUPERFAMILY SSF55545 30 161 1.44E-24 T 15-10-2018 IPR029018 Beta-hexosaminidase-like, domain 2 AM378_21600 47817b10f5a2428221d89282454bf170 797 Pfam PF02838 Glycosyl hydrolase family 20, domain 2 30 158 1.1E-14 T 15-10-2018 IPR015882 Beta-hexosaminidase, bacterial type, N-terminal AM378_21600 47817b10f5a2428221d89282454bf170 797 Gene3D G3DSA:3.20.20.80 491 647 2.7E-16 T 15-10-2018 AM378_21600 47817b10f5a2428221d89282454bf170 797 SUPERFAMILY SSF51445 162 600 3.16E-109 T 15-10-2018 IPR017853 Glycoside hydrolase superfamily AM378_21600 47817b10f5a2428221d89282454bf170 797 Pfam PF00728 Glycosyl hydrolase family 20, catalytic domain 162 587 5.4E-102 T 15-10-2018 IPR015883 Glycoside hydrolase family 20, catalytic domain GO:0004553|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 AM378_21600 47817b10f5a2428221d89282454bf170 797 Gene3D G3DSA:3.20.20.80 161 452 1.5E-96 T 15-10-2018 AM378_21600 47817b10f5a2428221d89282454bf170 797 PRINTS PR00738 Glycosyl hydrolase family 20 signature 569 586 7.1E-48 T 15-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 AM378_21600 47817b10f5a2428221d89282454bf170 797 PRINTS PR00738 Glycosyl hydrolase family 20 signature 121 141 7.1E-48 T 15-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 AM378_21600 47817b10f5a2428221d89282454bf170 797 PRINTS PR00738 Glycosyl hydrolase family 20 signature 185 206 7.1E-48 T 15-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 AM378_21600 47817b10f5a2428221d89282454bf170 797 PRINTS PR00738 Glycosyl hydrolase family 20 signature 237 254 7.1E-48 T 15-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 AM378_21600 47817b10f5a2428221d89282454bf170 797 PRINTS PR00738 Glycosyl hydrolase family 20 signature 156 173 7.1E-48 T 15-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 AM378_21600 47817b10f5a2428221d89282454bf170 797 PRINTS PR00738 Glycosyl hydrolase family 20 signature 552 568 7.1E-48 T 15-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 AM378_00135 d733ec82a0429e972ce5ca2f85dbde0b 203 Pfam PF11612 Type II secretion system (T2SS), protein J 60 194 2.3E-27 T 15-10-2018 IPR010055 Type II secretion system protein J GO:0008565|GO:0015627|GO:0015628 AM378_00135 d733ec82a0429e972ce5ca2f85dbde0b 203 Pfam PF07963 Prokaryotic N-terminal methylation motif 5 29 1.3E-7 T 15-10-2018 IPR012902 Prokaryotic N-terminal methylation site AM378_00135 d733ec82a0429e972ce5ca2f85dbde0b 203 Gene3D G3DSA:3.10.610.10 39 149 1.9E-20 T 15-10-2018 AM378_00135 d733ec82a0429e972ce5ca2f85dbde0b 203 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 6 29 1.3E-6 T 15-10-2018 IPR012902 Prokaryotic N-terminal methylation site AM378_00135 d733ec82a0429e972ce5ca2f85dbde0b 203 SUPERFAMILY SSF54523 40 199 1.05E-37 T 15-10-2018 AM378_00135 d733ec82a0429e972ce5ca2f85dbde0b 203 TIGRFAM TIGR01711 gspJ: type II secretion system protein J 8 195 3.9E-45 T 15-10-2018 IPR010055 Type II secretion system protein J GO:0008565|GO:0015627|GO:0015628 AM378_00135 d733ec82a0429e972ce5ca2f85dbde0b 203 Gene3D G3DSA:2.10.70.20 153 199 6.3E-10 T 15-10-2018 AM378_15350 3c08369773eb0d2d94a0a39528109232 302 SUPERFAMILY SSF53807 39 296 2.75E-55 T 15-10-2018 AM378_15350 3c08369773eb0d2d94a0a39528109232 302 Gene3D G3DSA:3.40.50.1980 129 300 2.3E-57 T 15-10-2018 AM378_15350 3c08369773eb0d2d94a0a39528109232 302 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 60 78 5.4E-40 T 15-10-2018 AM378_15350 3c08369773eb0d2d94a0a39528109232 302 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 190 205 5.4E-40 T 15-10-2018 AM378_15350 3c08369773eb0d2d94a0a39528109232 302 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 214 232 5.4E-40 T 15-10-2018 AM378_15350 3c08369773eb0d2d94a0a39528109232 302 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 242 259 5.4E-40 T 15-10-2018 AM378_15350 3c08369773eb0d2d94a0a39528109232 302 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 279 292 5.4E-40 T 15-10-2018 AM378_15350 3c08369773eb0d2d94a0a39528109232 302 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 91 106 5.4E-40 T 15-10-2018 AM378_15350 3c08369773eb0d2d94a0a39528109232 302 Gene3D G3DSA:3.40.50.1980 39 127 2.9E-20 T 15-10-2018 AM378_15350 3c08369773eb0d2d94a0a39528109232 302 Pfam PF01497 Periplasmic binding protein 43 275 6.2E-39 T 15-10-2018 IPR002491 ABC transporter periplasmic binding domain AM378_13325 2eb82d91bab1eda7b9717c11b05ef7e4 424 Gene3D G3DSA:3.30.930.10 2 322 1.1E-119 T 15-10-2018 AM378_13325 2eb82d91bab1eda7b9717c11b05ef7e4 424 SUPERFAMILY SSF55681 5 318 1.13E-105 T 15-10-2018 AM378_13325 2eb82d91bab1eda7b9717c11b05ef7e4 424 Gene3D G3DSA:3.40.50.800 327 422 2.2E-25 T 15-10-2018 IPR036621 Anticodon-binding domain superfamily AM378_13325 2eb82d91bab1eda7b9717c11b05ef7e4 424 Hamap MF_00127 Histidine--tRNA ligase [hisS]. 3 421 33.723 T 15-10-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 AM378_13325 2eb82d91bab1eda7b9717c11b05ef7e4 424 PIRSF PIRSF001549 2 421 3.3E-128 T 15-10-2018 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 AM378_13325 2eb82d91bab1eda7b9717c11b05ef7e4 424 Pfam PF13393 Histidyl-tRNA synthetase 10 312 9.3E-48 T 15-10-2018 AM378_13325 2eb82d91bab1eda7b9717c11b05ef7e4 424 Pfam PF03129 Anticodon binding domain 330 419 3.2E-10 T 15-10-2018 IPR004154 Anticodon-binding AM378_13325 2eb82d91bab1eda7b9717c11b05ef7e4 424 SUPERFAMILY SSF52954 327 420 9.98E-24 T 15-10-2018 AM378_13325 2eb82d91bab1eda7b9717c11b05ef7e4 424 TIGRFAM TIGR00442 hisS: histidine--tRNA ligase 6 411 6.4E-158 T 15-10-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 AM378_03090 bfb37180b427da51a1f647202215ca9e 244 Gene3D G3DSA:1.20.144.10 155 244 1.6E-7 T 15-10-2018 AM378_03090 bfb37180b427da51a1f647202215ca9e 244 SUPERFAMILY SSF48317 25 235 1.09E-12 T 15-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily AM378_03090 bfb37180b427da51a1f647202215ca9e 244 Pfam PF01569 PAP2 superfamily 111 236 3.3E-10 T 15-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AM378_22075 c62cbca6d0a646c05b8257cd4cf74911 570 Gene3D G3DSA:3.30.1120.10 459 541 4.6E-15 T 15-10-2018 AM378_22075 c62cbca6d0a646c05b8257cd4cf74911 570 ProSitePatterns PS00149 Sulfatases signature 2. 124 134 - T 15-10-2018 IPR024607 Sulfatase, conserved site AM378_22075 c62cbca6d0a646c05b8257cd4cf74911 570 Pfam PF00884 Sulfatase 26 428 5.2E-67 T 15-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 AM378_22075 c62cbca6d0a646c05b8257cd4cf74911 570 SUPERFAMILY SSF53649 24 530 1.29E-123 T 15-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 AM378_22075 c62cbca6d0a646c05b8257cd4cf74911 570 ProSitePatterns PS00523 Sulfatases signature 1. 70 82 - T 15-10-2018 IPR024607 Sulfatase, conserved site AM378_22075 c62cbca6d0a646c05b8257cd4cf74911 570 Gene3D G3DSA:3.40.720.10 23 456 1.8E-119 T 15-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 AM378_15580 81f8740058b9610a7aad1bcb8b383e7a 340 Gene3D G3DSA:3.30.450.90 1 100 1.0E-27 T 15-10-2018 AM378_15580 81f8740058b9610a7aad1bcb8b383e7a 340 Pfam PF00437 Type II/IV secretion system protein 12 272 7.5E-41 T 15-10-2018 IPR001482 Type II/IV secretion system protein AM378_15580 81f8740058b9610a7aad1bcb8b383e7a 340 SMART SM00382 123 248 0.0013 T 15-10-2018 IPR003593 AAA+ ATPase domain AM378_15580 81f8740058b9610a7aad1bcb8b383e7a 340 Gene3D G3DSA:3.40.50.300 103 337 5.4E-90 T 15-10-2018 AM378_15580 81f8740058b9610a7aad1bcb8b383e7a 340 SUPERFAMILY SSF52540 3 329 2.03E-62 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_15580 81f8740058b9610a7aad1bcb8b383e7a 340 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 3 332 2.1E-133 T 15-10-2018 IPR006321 Pilus retraction protein PilT GO:0005524 AM378_15580 81f8740058b9610a7aad1bcb8b383e7a 340 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 194 208 - T 15-10-2018 IPR001482 Type II/IV secretion system protein AM378_11515 a3b206935faf6ff55d689147a9459b33 345 TIGRFAM TIGR02272 gentisate_1_2: gentisate 1,2-dioxygenase 11 344 3.3E-178 T 15-10-2018 IPR011960 Gentisate 1,2-dioxygenase AM378_11515 a3b206935faf6ff55d689147a9459b33 345 SUPERFAMILY SSF51182 9 343 8.91E-113 T 15-10-2018 IPR011051 RmlC-like cupin domain superfamily AM378_11515 a3b206935faf6ff55d689147a9459b33 345 Pfam PF07883 Cupin domain 94 162 5.0E-24 T 15-10-2018 IPR013096 Cupin 2, conserved barrel AM378_11515 a3b206935faf6ff55d689147a9459b33 345 Gene3D G3DSA:2.60.120.10 8 345 1.2E-123 T 15-10-2018 IPR014710 RmlC-like jelly roll fold AM378_05435 ec7090bbe76c5c3a8c1cc608c4da824f 284 SUPERFAMILY SSF81345 8 266 2.09E-44 T 15-10-2018 IPR037294 ABC transporter, BtuC-like AM378_05435 ec7090bbe76c5c3a8c1cc608c4da824f 284 Gene3D G3DSA:1.10.3470.10 49 272 3.9E-8 T 15-10-2018 IPR037294 ABC transporter, BtuC-like AM378_05435 ec7090bbe76c5c3a8c1cc608c4da824f 284 Pfam PF00950 ABC 3 transport family 14 268 2.4E-96 T 15-10-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 AM378_15335 6f1a2a74e26dad2dfead7ca073a70e16 51 PRINTS PR00281 Hok/Gef cell toxic protein family signature 26 48 3.0E-11 T 15-10-2018 IPR000021 Hok/gef cell toxic protein GO:0016020 AM378_15335 6f1a2a74e26dad2dfead7ca073a70e16 51 PRINTS PR00281 Hok/Gef cell toxic protein family signature 6 24 3.0E-11 T 15-10-2018 IPR000021 Hok/gef cell toxic protein GO:0016020 AM378_15335 6f1a2a74e26dad2dfead7ca073a70e16 51 Pfam PF01848 Hok/gef family 11 47 5.6E-17 T 15-10-2018 IPR000021 Hok/gef cell toxic protein GO:0016020 AM378_15335 6f1a2a74e26dad2dfead7ca073a70e16 51 ProDom PD005979 PLASMID MEMBRANE TRANSMEMBRANE POST-SEGREGATION KILLING INHERITANCE ALTERING PERMEABILITY STABLE MAINTENANCE 2 49 4.0E-9 T 15-10-2018 IPR000021 Hok/gef cell toxic protein GO:0016020 AM378_15335 6f1a2a74e26dad2dfead7ca073a70e16 51 ProSitePatterns PS00556 Hok/gef family cell toxic proteins signature. 11 30 - T 15-10-2018 IPR018084 Hok/gef cell toxic protein, conserved site GO:0016020 AM378_12430 77b79dc26fb3dbbf0fba7fc1621750f4 822 Gene3D G3DSA:2.60.40.2610 650 740 2.6E-34 T 15-10-2018 AM378_12430 77b79dc26fb3dbbf0fba7fc1621750f4 822 Gene3D G3DSA:3.10.20.410 27 148 1.2E-29 T 15-10-2018 AM378_12430 77b79dc26fb3dbbf0fba7fc1621750f4 822 SUPERFAMILY SSF141729 54 162 4.19E-26 T 15-10-2018 IPR037224 PapC, N-terminal domain superfamily GO:0005515 AM378_12430 77b79dc26fb3dbbf0fba7fc1621750f4 822 Gene3D G3DSA:2.60.40.2070 741 822 4.6E-20 T 15-10-2018 AM378_12430 77b79dc26fb3dbbf0fba7fc1621750f4 822 Pfam PF13953 PapC C-terminal domain 745 805 1.1E-13 T 15-10-2018 IPR025949 PapC-like, C-terminal domain AM378_12430 77b79dc26fb3dbbf0fba7fc1621750f4 822 Pfam PF13954 PapC N-terminal domain 29 171 3.5E-39 T 15-10-2018 IPR025885 PapC, N-terminal domain GO:0005515 AM378_12430 77b79dc26fb3dbbf0fba7fc1621750f4 822 Gene3D G3DSA:2.60.40.3110 255 344 1.0E-35 T 15-10-2018 AM378_12430 77b79dc26fb3dbbf0fba7fc1621750f4 822 Pfam PF00577 Outer membrane usher protein 187 735 2.5E-176 T 15-10-2018 IPR000015 Outer membrane usher protein GO:0009297|GO:0015473|GO:0016020 AM378_15060 84a5cdc22c43c2e543ddb56b6d179e0f 202 SUPERFAMILY SSF100950 10 196 3.63E-57 T 15-10-2018 IPR037171 NagB/RpiA transferase-like AM378_15060 84a5cdc22c43c2e543ddb56b6d179e0f 202 Gene3D G3DSA:3.40.50.10420 3 196 6.6E-58 T 15-10-2018 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily AM378_15060 84a5cdc22c43c2e543ddb56b6d179e0f 202 PIRSF PIRSF006806 6 193 4.3E-37 T 15-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase AM378_15060 84a5cdc22c43c2e543ddb56b6d179e0f 202 Pfam PF01812 5-formyltetrahydrofolate cyclo-ligase family 11 192 5.9E-47 T 15-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase AM378_15060 84a5cdc22c43c2e543ddb56b6d179e0f 202 TIGRFAM TIGR02727 MTHFS_bact: 5-formyltetrahydrofolate cyclo-ligase 11 192 8.7E-54 T 15-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase AM378_05565 cab7870c27df46401f88a51d2c69157d 326 Pfam PF00535 Glycosyl transferase family 2 11 172 1.0E-33 T 15-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 AM378_05565 cab7870c27df46401f88a51d2c69157d 326 Hamap MF_01164 Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase [arnC]. 2 326 62.105 T 15-10-2018 IPR022857 Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase GO:0016780 KEGG: 00520+2.4.2.53 AM378_05565 cab7870c27df46401f88a51d2c69157d 326 SUPERFAMILY SSF53448 7 235 1.31E-40 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AM378_05565 cab7870c27df46401f88a51d2c69157d 326 Gene3D G3DSA:3.90.550.10 3 231 8.2E-42 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AM378_03580 ccbc3116906b2358c28f4d7b4b55a066 215 SUPERFAMILY SSF56281 2 209 1.07E-61 T 15-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AM378_03580 ccbc3116906b2358c28f4d7b4b55a066 215 SMART SM00849 12 192 4.6E-43 T 15-10-2018 IPR001279 Metallo-beta-lactamase AM378_03580 ccbc3116906b2358c28f4d7b4b55a066 215 Gene3D G3DSA:3.60.15.10 1 210 4.4E-87 T 15-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AM378_03580 ccbc3116906b2358c28f4d7b4b55a066 215 Pfam PF00753 Metallo-beta-lactamase superfamily 10 192 1.7E-32 T 15-10-2018 IPR001279 Metallo-beta-lactamase AM378_00270 89eaf9b73d2ea04c2be4a37f40da3af9 623 SUPERFAMILY SSF110942 509 621 8.37E-35 T 15-10-2018 IPR037196 HSP90, C-terminal domain AM378_00270 89eaf9b73d2ea04c2be4a37f40da3af9 623 Gene3D G3DSA:1.20.120.790 493 622 1.1E-45 T 15-10-2018 IPR037196 HSP90, C-terminal domain AM378_00270 89eaf9b73d2ea04c2be4a37f40da3af9 623 PRINTS PR00775 90kDa heat shock protein signature 192 210 8.6E-64 T 15-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal AM378_00270 89eaf9b73d2ea04c2be4a37f40da3af9 623 PRINTS PR00775 90kDa heat shock protein signature 7 27 8.6E-64 T 15-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal AM378_00270 89eaf9b73d2ea04c2be4a37f40da3af9 623 PRINTS PR00775 90kDa heat shock protein signature 28 50 8.6E-64 T 15-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal AM378_00270 89eaf9b73d2ea04c2be4a37f40da3af9 623 PRINTS PR00775 90kDa heat shock protein signature 77 94 8.6E-64 T 15-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal AM378_00270 89eaf9b73d2ea04c2be4a37f40da3af9 623 PRINTS PR00775 90kDa heat shock protein signature 95 112 8.6E-64 T 15-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal AM378_00270 89eaf9b73d2ea04c2be4a37f40da3af9 623 PRINTS PR00775 90kDa heat shock protein signature 122 144 8.6E-64 T 15-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal AM378_00270 89eaf9b73d2ea04c2be4a37f40da3af9 623 PRINTS PR00775 90kDa heat shock protein signature 174 191 8.6E-64 T 15-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal AM378_00270 89eaf9b73d2ea04c2be4a37f40da3af9 623 Hamap MF_00505 Chaperone protein HtpG [htpG]. 4 622 32.819 T 15-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 AM378_00270 89eaf9b73d2ea04c2be4a37f40da3af9 623 SUPERFAMILY SSF55874 6 215 4.32E-66 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AM378_00270 89eaf9b73d2ea04c2be4a37f40da3af9 623 PIRSF PIRSF002583 1 623 1.5E-218 T 15-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 AM378_00270 89eaf9b73d2ea04c2be4a37f40da3af9 623 Gene3D G3DSA:3.30.565.10 2 217 4.7E-78 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AM378_00270 89eaf9b73d2ea04c2be4a37f40da3af9 623 Gene3D G3DSA:3.30.230.80 229 401 2.8E-71 T 15-10-2018 AM378_00270 89eaf9b73d2ea04c2be4a37f40da3af9 623 Gene3D G3DSA:3.40.50.11260 402 492 8.3E-36 T 15-10-2018 AM378_00270 89eaf9b73d2ea04c2be4a37f40da3af9 623 SMART SM00387 29 186 9.4E-12 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AM378_00270 89eaf9b73d2ea04c2be4a37f40da3af9 623 Pfam PF00183 Hsp90 protein 214 622 4.3E-126 T 15-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 AM378_00270 89eaf9b73d2ea04c2be4a37f40da3af9 623 ProSitePatterns PS00298 Heat shock hsp90 proteins family signature. 27 36 - T 15-10-2018 IPR019805 Heat shock protein Hsp90, conserved site GO:0005524|GO:0006457|GO:0051082 AM378_00270 89eaf9b73d2ea04c2be4a37f40da3af9 623 SUPERFAMILY SSF54211 230 485 1.21E-101 T 15-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AM378_00270 89eaf9b73d2ea04c2be4a37f40da3af9 623 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 29 184 1.2E-13 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AM378_11525 cb18b7c396472ca719756cf55efc7a34 302 Gene3D G3DSA:1.10.10.10 8 97 5.6E-23 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_11525 cb18b7c396472ca719756cf55efc7a34 302 Gene3D G3DSA:3.40.190.10 172 275 1.1E-38 T 15-10-2018 AM378_11525 cb18b7c396472ca719756cf55efc7a34 302 Pfam PF03466 LysR substrate binding domain 95 301 1.6E-31 T 15-10-2018 IPR005119 LysR, substrate-binding AM378_11525 cb18b7c396472ca719756cf55efc7a34 302 SUPERFAMILY SSF53850 96 302 3.67E-32 T 15-10-2018 AM378_11525 cb18b7c396472ca719756cf55efc7a34 302 Gene3D G3DSA:3.40.190.10 108 289 1.1E-38 T 15-10-2018 AM378_11525 cb18b7c396472ca719756cf55efc7a34 302 SUPERFAMILY SSF46785 7 110 1.21E-19 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM378_11525 cb18b7c396472ca719756cf55efc7a34 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 36 46 3.7E-8 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_11525 cb18b7c396472ca719756cf55efc7a34 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 25 36 3.7E-8 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_11525 cb18b7c396472ca719756cf55efc7a34 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 46 57 3.7E-8 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_11525 cb18b7c396472ca719756cf55efc7a34 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 68 7.2E-16 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_17050 1b371aaec6e20d4af32403f1e2d79335 155 SMART SM00344 4 113 1.8E-31 T 15-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 AM378_17050 1b371aaec6e20d4af32403f1e2d79335 155 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 4 20 1.8E-10 T 15-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 AM378_17050 1b371aaec6e20d4af32403f1e2d79335 155 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 31 50 1.8E-10 T 15-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 AM378_17050 1b371aaec6e20d4af32403f1e2d79335 155 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 20 31 1.8E-10 T 15-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 AM378_17050 1b371aaec6e20d4af32403f1e2d79335 155 Pfam PF01037 Lrp/AsnC ligand binding domain 70 143 1.5E-19 T 15-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain AM378_17050 1b371aaec6e20d4af32403f1e2d79335 155 Gene3D G3DSA:3.30.70.920 55 150 2.8E-20 T 15-10-2018 AM378_17050 1b371aaec6e20d4af32403f1e2d79335 155 SUPERFAMILY SSF54909 65 153 8.45E-17 T 15-10-2018 IPR011008 Dimeric alpha-beta barrel AM378_17050 1b371aaec6e20d4af32403f1e2d79335 155 Gene3D G3DSA:1.10.10.10 5 54 6.8E-21 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_17050 1b371aaec6e20d4af32403f1e2d79335 155 SUPERFAMILY SSF46785 2 63 1.97E-14 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM378_17050 1b371aaec6e20d4af32403f1e2d79335 155 Pfam PF13404 AsnC-type helix-turn-helix domain 4 41 4.3E-14 T 15-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 AM378_03595 77193aa3d2adb4f2a61cbd9a323c8909 466 Gene3D G3DSA:2.40.50.140 2 104 3.3E-21 T 15-10-2018 AM378_03595 77193aa3d2adb4f2a61cbd9a323c8909 466 TIGRFAM TIGR00457 asnS: asparagine--tRNA ligase 5 466 3.8E-210 T 15-10-2018 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22 AM378_03595 77193aa3d2adb4f2a61cbd9a323c8909 466 Gene3D G3DSA:3.30.930.10 109 465 4.1E-110 T 15-10-2018 AM378_03595 77193aa3d2adb4f2a61cbd9a323c8909 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 208 220 3.2E-14 T 15-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM378_03595 77193aa3d2adb4f2a61cbd9a323c8909 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 381 397 3.2E-14 T 15-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM378_03595 77193aa3d2adb4f2a61cbd9a323c8909 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 224 237 3.2E-14 T 15-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM378_03595 77193aa3d2adb4f2a61cbd9a323c8909 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 421 435 3.2E-14 T 15-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM378_03595 77193aa3d2adb4f2a61cbd9a323c8909 466 Hamap MF_00534 Asparagine--tRNA ligase [asnS]. 6 466 46.577 T 15-10-2018 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22 AM378_03595 77193aa3d2adb4f2a61cbd9a323c8909 466 SUPERFAMILY SSF50249 15 102 1.54E-17 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold AM378_03595 77193aa3d2adb4f2a61cbd9a323c8909 466 SUPERFAMILY SSF55681 104 464 1.21E-96 T 15-10-2018 AM378_03595 77193aa3d2adb4f2a61cbd9a323c8909 466 Pfam PF01336 OB-fold nucleic acid binding domain 20 99 1.8E-11 T 15-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 AM378_03595 77193aa3d2adb4f2a61cbd9a323c8909 466 Pfam PF00152 tRNA synthetases class II (D, K and N) 119 460 2.2E-83 T 15-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM378_22100 551df7c9901de270fc4bf45135db0f79 265 Pfam PF10703 MoaF N-terminal domain 6 109 1.1E-30 T 15-10-2018 IPR024724 Molybdenum cofactor biosynthesis protein F, N-terminal AM378_22100 551df7c9901de270fc4bf45135db0f79 265 Pfam PF17409 MoaF C-terminal domain 149 260 5.1E-51 T 15-10-2018 IPR035348 MoaF, C-terminal domain AM378_05535 1fca5457f9efcccc4a300a0c49dda1e6 98 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 48 67 - T 15-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 AM378_05535 1fca5457f9efcccc4a300a0c49dda1e6 98 Hamap MF_00380 Integration host factor subunit alpha [ihfA]. 1 97 31.102 T 15-10-2018 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355 AM378_05535 1fca5457f9efcccc4a300a0c49dda1e6 98 TIGRFAM TIGR00987 himA: integration host factor, alpha subunit 2 97 3.5E-54 T 15-10-2018 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355 AM378_05535 1fca5457f9efcccc4a300a0c49dda1e6 98 Pfam PF00216 Bacterial DNA-binding protein 3 91 9.9E-31 T 15-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AM378_05535 1fca5457f9efcccc4a300a0c49dda1e6 98 PRINTS PR01727 Prokaryotic integration host factor signature 42 57 3.1E-17 T 15-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AM378_05535 1fca5457f9efcccc4a300a0c49dda1e6 98 PRINTS PR01727 Prokaryotic integration host factor signature 76 90 3.1E-17 T 15-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AM378_05535 1fca5457f9efcccc4a300a0c49dda1e6 98 PRINTS PR01727 Prokaryotic integration host factor signature 60 73 3.1E-17 T 15-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AM378_05535 1fca5457f9efcccc4a300a0c49dda1e6 98 SUPERFAMILY SSF47729 3 93 1.62E-31 T 15-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 AM378_05535 1fca5457f9efcccc4a300a0c49dda1e6 98 Gene3D G3DSA:4.10.520.10 1 98 4.8E-38 T 15-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 AM378_05535 1fca5457f9efcccc4a300a0c49dda1e6 98 SMART SM00411 3 92 2.2E-42 T 15-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AM378_19705 6a898bd9f47681d12648317f1017a2ad 330 Hamap MF_01949 O-acetyltransferase WecH [wecH]. 1 330 37.935 T 15-10-2018 IPR032905 O-acetyltransferase WecH GO:0009246|GO:0016413 AM378_19705 6a898bd9f47681d12648317f1017a2ad 330 Pfam PF01757 Acyltransferase family 6 318 1.3E-28 T 15-10-2018 IPR002656 Acyltransferase 3 GO:0016747 AM378_23835 809176a86a9850ba2bd9c5f2f89f5f9d 126 Gene3D G3DSA:1.10.10.10 3 121 9.8E-37 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_23835 809176a86a9850ba2bd9c5f2f89f5f9d 126 Pfam PF01638 HxlR-like helix-turn-helix 20 108 3.4E-20 T 15-10-2018 IPR002577 Helix-turn-helix, HxlR type AM378_23835 809176a86a9850ba2bd9c5f2f89f5f9d 126 SUPERFAMILY SSF46785 6 119 3.33E-29 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM378_22645 add30d8fd4163fbd8a097400922f5e5a 272 Gene3D G3DSA:3.40.50.150 1 200 1.7E-67 T 15-10-2018 AM378_22645 add30d8fd4163fbd8a097400922f5e5a 272 SMART SM00650 25 198 4.2E-83 T 15-10-2018 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 AM378_22645 add30d8fd4163fbd8a097400922f5e5a 272 Pfam PF00398 Ribosomal RNA adenine dimethylase 11 264 1.2E-79 T 15-10-2018 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm AM378_22645 add30d8fd4163fbd8a097400922f5e5a 272 ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. 41 68 - T 15-10-2018 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GO:0000154|GO:0000179|GO:0008649 AM378_22645 add30d8fd4163fbd8a097400922f5e5a 272 SUPERFAMILY SSF53335 5 265 6.31E-78 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM378_22645 add30d8fd4163fbd8a097400922f5e5a 272 Hamap MF_00607 Ribosomal RNA small subunit methyltransferase A [rsmA]. 9 265 55.739 T 15-10-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 AM378_22645 add30d8fd4163fbd8a097400922f5e5a 272 Gene3D G3DSA:1.10.8.100 201 267 2.2E-28 T 15-10-2018 IPR023165 rRNA adenine dimethylase-like Reactome: R-HSA-2151201|Reactome: R-HSA-6793080 AM378_22645 add30d8fd4163fbd8a097400922f5e5a 272 TIGRFAM TIGR00755 ksgA: ribosomal RNA small subunit methyltransferase A 11 264 3.7E-89 T 15-10-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 AM378_15390 13eb542ea4416e5f4cac4b35e50471c3 151 Hamap MF_00926 RNA polymerase-binding transcription factor DksA [dksA]. 28 150 30.429 T 15-10-2018 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 AM378_15390 13eb542ea4416e5f4cac4b35e50471c3 151 PRINTS PR00618 DksA/TraR zinc finger signature 126 138 9.9E-5 T 15-10-2018 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria AM378_15390 13eb542ea4416e5f4cac4b35e50471c3 151 PRINTS PR00618 DksA/TraR zinc finger signature 114 125 9.9E-5 T 15-10-2018 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria AM378_15390 13eb542ea4416e5f4cac4b35e50471c3 151 SUPERFAMILY SSF109635 9 110 3.4E-38 T 15-10-2018 IPR037187 DksA, N-terminal domain superfamily AM378_15390 13eb542ea4416e5f4cac4b35e50471c3 151 SUPERFAMILY SSF57716 111 149 4.56E-10 T 15-10-2018 AM378_15390 13eb542ea4416e5f4cac4b35e50471c3 151 TIGRFAM TIGR02420 dksA: RNA polymerase-binding protein DksA 32 140 8.3E-52 T 15-10-2018 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 AM378_15390 13eb542ea4416e5f4cac4b35e50471c3 151 ProSitePatterns PS01102 Prokaryotic dksA C4-type zinc finger. 114 138 - T 15-10-2018 IPR020458 Zinc finger, DksA/TraR C4-type conserved site AM378_15390 13eb542ea4416e5f4cac4b35e50471c3 151 Gene3D G3DSA:1.20.120.910 20 150 9.6E-37 T 15-10-2018 AM378_15390 13eb542ea4416e5f4cac4b35e50471c3 151 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 111 143 2.3E-10 T 15-10-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 AM378_23385 fc0b62a0901e60b5b04d695aa2bb1078 325 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 14 312 3.8E-110 T 15-10-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM378_23385 fc0b62a0901e60b5b04d695aa2bb1078 325 SUPERFAMILY SSF55120 77 321 3.29E-79 T 15-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM378_23385 fc0b62a0901e60b5b04d695aa2bb1078 325 Pfam PF00849 RNA pseudouridylate synthase 92 241 2.0E-31 T 15-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM378_23385 fc0b62a0901e60b5b04d695aa2bb1078 325 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 135 149 - T 15-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM378_23385 fc0b62a0901e60b5b04d695aa2bb1078 325 SMART SM00363 18 83 1.7E-10 T 15-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM378_23385 fc0b62a0901e60b5b04d695aa2bb1078 325 Gene3D G3DSA:3.10.290.10 2 76 1.3E-25 T 15-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 AM378_23385 fc0b62a0901e60b5b04d695aa2bb1078 325 Pfam PF01479 S4 domain 18 65 1.1E-10 T 15-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM378_23385 fc0b62a0901e60b5b04d695aa2bb1078 325 SUPERFAMILY SSF55174 17 69 3.2E-11 T 15-10-2018 AM378_23385 fc0b62a0901e60b5b04d695aa2bb1078 325 Gene3D G3DSA:3.30.2350.10 84 316 1.1E-71 T 15-10-2018 AM378_12765 541c7aecd8c76d7a12ebcfea026a346d 558 Pfam PF07730 Histidine kinase 364 425 4.5E-16 T 15-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 AM378_12765 541c7aecd8c76d7a12ebcfea026a346d 558 PIRSF PIRSF003167 295 558 7.0E-94 T 15-10-2018 IPR016380 Signal transduction histidine kinase, nitrate/nitrite-sensing GO:0000155|GO:0000160|GO:0004673|GO:0016021 AM378_12765 541c7aecd8c76d7a12ebcfea026a346d 558 PIRSF PIRSF003167 1 306 1.0E-74 T 15-10-2018 IPR016380 Signal transduction histidine kinase, nitrate/nitrite-sensing GO:0000155|GO:0000160|GO:0004673|GO:0016021 AM378_12765 541c7aecd8c76d7a12ebcfea026a346d 558 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 470 556 3.8E-9 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AM378_12765 541c7aecd8c76d7a12ebcfea026a346d 558 SMART SM00304 174 227 5.8E-5 T 15-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AM378_12765 541c7aecd8c76d7a12ebcfea026a346d 558 SUPERFAMILY SSF158472 174 225 8.5E-6 T 15-10-2018 AM378_12765 541c7aecd8c76d7a12ebcfea026a346d 558 Gene3D G3DSA:1.20.120.960 38 146 2.4E-14 T 15-10-2018 AM378_12765 541c7aecd8c76d7a12ebcfea026a346d 558 Gene3D G3DSA:1.10.287.130 171 283 6.2E-5 T 15-10-2018 AM378_12765 541c7aecd8c76d7a12ebcfea026a346d 558 Pfam PF00672 HAMP domain 174 223 6.9E-7 T 15-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AM378_12765 541c7aecd8c76d7a12ebcfea026a346d 558 SUPERFAMILY SSF55874 433 556 1.22E-16 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AM378_12765 541c7aecd8c76d7a12ebcfea026a346d 558 SMART SM00387 466 558 9.8E-8 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AM378_12765 541c7aecd8c76d7a12ebcfea026a346d 558 Gene3D G3DSA:3.30.565.10 426 558 9.7E-26 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AM378_12765 541c7aecd8c76d7a12ebcfea026a346d 558 Pfam PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term 32 128 2.1E-23 T 15-10-2018 IPR029095 NarX-like, N-terminal AM378_20820 8be263b2145459d84a929f99fd997881 459 Gene3D G3DSA:3.40.50.1820 165 438 5.0E-65 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold AM378_20820 8be263b2145459d84a929f99fd997881 459 Pfam PF00756 Putative esterase 203 428 7.1E-34 T 15-10-2018 IPR000801 Putative esterase Reactome: R-HSA-156590 AM378_20820 8be263b2145459d84a929f99fd997881 459 Gene3D G3DSA:2.60.40.10 10 164 3.0E-51 T 15-10-2018 IPR013783 Immunoglobulin-like fold AM378_20820 8be263b2145459d84a929f99fd997881 459 SUPERFAMILY SSF81296 16 170 3.36E-41 T 15-10-2018 IPR014756 Immunoglobulin E-set AM378_20820 8be263b2145459d84a929f99fd997881 459 Pfam PF11806 Domain of unknown function (DUF3327) 46 175 1.2E-42 T 15-10-2018 IPR021764 Enterochelin esterase, N-terminal GO:0005506|GO:0005737|GO:0006826|GO:0008849 AM378_20820 8be263b2145459d84a929f99fd997881 459 SUPERFAMILY SSF53474 188 430 1.13E-45 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold AM378_19465 3b160b2668bc42a0eea61795ec3ccf98 426 Gene3D G3DSA:2.120.10.30 282 426 1.4E-19 T 15-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like AM378_19465 3b160b2668bc42a0eea61795ec3ccf98 426 Pfam PF07676 WD40-like Beta Propeller Repeat 401 423 0.0054 T 15-10-2018 IPR011659 WD40-like Beta Propeller AM378_19465 3b160b2668bc42a0eea61795ec3ccf98 426 SUPERFAMILY SSF82171 22 421 2.75E-19 T 15-10-2018 AM378_19465 3b160b2668bc42a0eea61795ec3ccf98 426 Pfam PF12566 Protein of unknown function (DUF3748) 67 187 4.8E-57 T 15-10-2018 IPR022223 Protein of unknown function DUF3748 AM378_16145 3093c8991e20a3f72e616fbf11782552 177 Pfam PF09684 Phage tail protein (Tail_P2_I) 6 143 5.5E-51 T 15-10-2018 IPR006521 Tail protein I AM378_16145 3093c8991e20a3f72e616fbf11782552 177 TIGRFAM TIGR01634 tail_P2_I: phage tail protein I 6 143 9.1E-63 T 15-10-2018 IPR006521 Tail protein I AM378_16650 7d4f41273a56e99fc8969ae5875cf6f8 241 Pfam PF00005 ABC transporter 20 166 9.8E-34 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM378_16650 7d4f41273a56e99fc8969ae5875cf6f8 241 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM378_16650 7d4f41273a56e99fc8969ae5875cf6f8 241 Gene3D G3DSA:3.40.50.300 2 241 1.5E-71 T 15-10-2018 AM378_16650 7d4f41273a56e99fc8969ae5875cf6f8 241 TIGRFAM TIGR04406 LPS_export_lptB: LPS export ABC transporter ATP-binding protein 3 241 6.5E-122 T 15-10-2018 IPR030921 LPS export ABC transporter, ATP-binding protein LptB GO:0043190|GO:0055085 AM378_16650 7d4f41273a56e99fc8969ae5875cf6f8 241 SMART SM00382 28 231 1.0E-7 T 15-10-2018 IPR003593 AAA+ ATPase domain AM378_16650 7d4f41273a56e99fc8969ae5875cf6f8 241 SUPERFAMILY SSF52540 4 236 1.27E-65 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_16650 7d4f41273a56e99fc8969ae5875cf6f8 241 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 214 236 1.7E-8 T 15-10-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal AM378_19505 b2de0105f1a54a74169c420007d2db74 687 SUPERFAMILY SSF51445 178 655 1.54E-75 T 15-10-2018 IPR017853 Glycoside hydrolase superfamily AM378_19505 b2de0105f1a54a74169c420007d2db74 687 Gene3D G3DSA:3.20.20.80 432 654 7.0E-33 T 15-10-2018 AM378_19505 b2de0105f1a54a74169c420007d2db74 687 SMART SM00642 194 646 3.6E-75 T 15-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AM378_19505 b2de0105f1a54a74169c420007d2db74 687 PIRSF PIRSF036917 1 685 0.0 T 15-10-2018 IPR014635 Alpha-amylase, MalS type GO:0004556|GO:0005509|GO:0030980|GO:0042597|GO:0051692 KEGG: 00500+3.2.1.1 AM378_19505 b2de0105f1a54a74169c420007d2db74 687 Pfam PF00128 Alpha amylase, catalytic domain 227 605 2.4E-40 T 15-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AM378_19505 b2de0105f1a54a74169c420007d2db74 687 Gene3D G3DSA:3.20.20.80 177 415 5.4E-52 T 15-10-2018 AM378_20940 adcff12e5a30f2da8bcd003899d11801 105 Gene3D G3DSA:1.10.3730.20 1 105 8.4E-33 T 15-10-2018 AM378_20940 adcff12e5a30f2da8bcd003899d11801 105 Pfam PF00893 Small Multidrug Resistance protein 1 93 4.0E-32 T 15-10-2018 IPR000390 Small multidrug resistance protein family GO:0016021 AM378_20940 adcff12e5a30f2da8bcd003899d11801 105 SUPERFAMILY SSF103481 5 104 1.44E-21 T 15-10-2018 AM378_16460 2df66beab907a4ac135bf229cc4bdac1 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 68 5.0E-16 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_16460 2df66beab907a4ac135bf229cc4bdac1 298 SUPERFAMILY SSF46785 8 91 1.69E-16 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM378_16460 2df66beab907a4ac135bf229cc4bdac1 298 Pfam PF03466 LysR substrate binding domain 95 291 4.2E-18 T 15-10-2018 IPR005119 LysR, substrate-binding AM378_16460 2df66beab907a4ac135bf229cc4bdac1 298 Gene3D G3DSA:1.10.10.10 6 95 4.2E-19 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_16460 2df66beab907a4ac135bf229cc4bdac1 298 Gene3D G3DSA:3.40.190.290 110 288 5.6E-12 T 15-10-2018 AM378_16460 2df66beab907a4ac135bf229cc4bdac1 298 SUPERFAMILY SSF53850 93 295 1.76E-22 T 15-10-2018 AM378_13075 52528d2c5fe825570433254b7cce31b7 417 Hamap MF_01422 Multidrug resistance protein MdtA [mdtA]. 4 415 53.362 T 15-10-2018 IPR022824 Multidrug resistance protein MdtA AM378_13075 52528d2c5fe825570433254b7cce31b7 417 Pfam PF13437 HlyD family secretion protein 204 306 5.5E-7 T 15-10-2018 AM378_13075 52528d2c5fe825570433254b7cce31b7 417 Gene3D G3DSA:2.40.50.100 92 236 2.1E-69 T 15-10-2018 AM378_13075 52528d2c5fe825570433254b7cce31b7 417 Pfam PF13533 Biotin-lipoyl like 93 141 5.6E-16 T 15-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain AM378_13075 52528d2c5fe825570433254b7cce31b7 417 Gene3D G3DSA:2.40.420.20 304 396 6.0E-23 T 15-10-2018 AM378_13075 52528d2c5fe825570433254b7cce31b7 417 SUPERFAMILY SSF111369 85 319 2.22E-57 T 15-10-2018 AM378_13075 52528d2c5fe825570433254b7cce31b7 417 Gene3D G3DSA:2.40.30.170 86 303 2.1E-69 T 15-10-2018 AM378_13075 52528d2c5fe825570433254b7cce31b7 417 Gene3D G3DSA:1.10.287.470 127 200 2.1E-69 T 15-10-2018 AM378_13075 52528d2c5fe825570433254b7cce31b7 417 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 68 395 6.1E-80 T 15-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AM378_00545 22779d5200574885bf002c6b4a31b5ea 288 SUPERFAMILY SSF51735 123 285 3.64E-53 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily AM378_00545 22779d5200574885bf002c6b4a31b5ea 288 ProSitePatterns PS00767 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 2. 260 268 - T 15-10-2018 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 AM378_00545 22779d5200574885bf002c6b4a31b5ea 288 Gene3D G3DSA:3.40.50.720 6 259 3.9E-108 T 15-10-2018 AM378_00545 22779d5200574885bf002c6b4a31b5ea 288 Hamap MF_01576 Bifunctional protein FolD [folD]. 3 283 38.615 T 15-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 AM378_00545 22779d5200574885bf002c6b4a31b5ea 288 SUPERFAMILY SSF53223 3 122 1.25E-40 T 15-10-2018 AM378_00545 22779d5200574885bf002c6b4a31b5ea 288 Gene3D G3DSA:3.40.50.10860 8 276 3.9E-108 T 15-10-2018 AM378_00545 22779d5200574885bf002c6b4a31b5ea 288 ProSitePatterns PS00766 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 1. 76 101 - T 15-10-2018 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 AM378_00545 22779d5200574885bf002c6b4a31b5ea 288 Pfam PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 124 281 3.0E-69 T 15-10-2018 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GO:0004488 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 AM378_00545 22779d5200574885bf002c6b4a31b5ea 288 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 75 102 3.6E-89 T 15-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 AM378_00545 22779d5200574885bf002c6b4a31b5ea 288 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 34 56 3.6E-89 T 15-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 AM378_00545 22779d5200574885bf002c6b4a31b5ea 288 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 256 274 3.6E-89 T 15-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 AM378_00545 22779d5200574885bf002c6b4a31b5ea 288 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 155 175 3.6E-89 T 15-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 AM378_00545 22779d5200574885bf002c6b4a31b5ea 288 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 239 255 3.6E-89 T 15-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 AM378_00545 22779d5200574885bf002c6b4a31b5ea 288 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 110 131 3.6E-89 T 15-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 AM378_00545 22779d5200574885bf002c6b4a31b5ea 288 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 204 233 3.6E-89 T 15-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 AM378_00545 22779d5200574885bf002c6b4a31b5ea 288 Pfam PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 5 121 7.7E-40 T 15-10-2018 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 AM378_15080 cab7b6f44565ee08e79bd1e5b434fa75 243 Gene3D G3DSA:3.30.110.170 35 236 1.3E-51 T 15-10-2018 AM378_15080 cab7b6f44565ee08e79bd1e5b434fa75 243 Pfam PF04402 Protein of unknown function (DUF541) 34 235 8.9E-45 T 15-10-2018 IPR007497 Protein of unknown function DUF541 AM378_15080 cab7b6f44565ee08e79bd1e5b434fa75 243 Gene3D G3DSA:3.30.70.2970 44 151 1.3E-51 T 15-10-2018 AM378_01400 f21e4bac80754b95b76f6a9b4c876c1b 232 SUPERFAMILY SSF46689 12 91 4.26E-20 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AM378_01400 f21e4bac80754b95b76f6a9b4c876c1b 232 ProSitePatterns PS01081 TetR-type HTH domain signature. 34 64 - T 15-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site AM378_01400 f21e4bac80754b95b76f6a9b4c876c1b 232 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 43 66 2.2E-7 T 15-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM378_01400 f21e4bac80754b95b76f6a9b4c876c1b 232 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 22 35 2.2E-7 T 15-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM378_01400 f21e4bac80754b95b76f6a9b4c876c1b 232 Gene3D G3DSA:1.10.10.60 7 68 5.9E-25 T 15-10-2018 AM378_01400 f21e4bac80754b95b76f6a9b4c876c1b 232 Pfam PF00440 Bacterial regulatory proteins, tetR family 22 68 7.3E-15 T 15-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM378_01400 f21e4bac80754b95b76f6a9b4c876c1b 232 Gene3D G3DSA:1.10.357.10 69 231 6.2E-54 T 15-10-2018 AM378_01400 f21e4bac80754b95b76f6a9b4c876c1b 232 Pfam PF09209 Domain of unknown function (DUF1956) 101 225 3.7E-35 T 15-10-2018 IPR015292 Transcription regulator YbiH, C-terminal AM378_01400 f21e4bac80754b95b76f6a9b4c876c1b 232 SUPERFAMILY SSF48498 101 225 4.45E-32 T 15-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AM378_22715 6b1eea71029a3bf262ec49ea947e3e61 328 Pfam PF13343 Bacterial extracellular solute-binding protein 75 289 5.6E-18 T 15-10-2018 AM378_22715 6b1eea71029a3bf262ec49ea947e3e61 328 Gene3D G3DSA:3.40.190.10 24 298 2.3E-118 T 15-10-2018 AM378_22715 6b1eea71029a3bf262ec49ea947e3e61 328 Gene3D G3DSA:3.40.190.10 124 323 2.3E-118 T 15-10-2018 AM378_22715 6b1eea71029a3bf262ec49ea947e3e61 328 TIGRFAM TIGR01254 sfuA: ABC transporter periplasmic binding protein, thiB subfamily 19 322 4.3E-146 T 15-10-2018 IPR005948 Thiamine/thiamin pyrophosphate-binding periplasmic protein, ABC transporter GO:0015888|GO:0030975 AM378_22715 6b1eea71029a3bf262ec49ea947e3e61 328 TIGRFAM TIGR01276 thiB: thiamin/thiamin pyrophosphate ABC transporter, thiamin/thiamin pyrophospate-binding protein 9 328 7.4E-165 T 15-10-2018 IPR005967 Thiamin/thiamin pyrophosphate ABC transporter, substrate-binding protein, Proteobacteria GO:0015888|GO:0030288|GO:0030975 AM378_22715 6b1eea71029a3bf262ec49ea947e3e61 328 SUPERFAMILY SSF53850 22 323 2.91E-63 T 15-10-2018 AM378_16550 218da93a656bed5a099768727cce2215 213 SUPERFAMILY SSF52833 11 110 7.75E-23 T 15-10-2018 IPR036249 Thioredoxin-like superfamily AM378_16550 218da93a656bed5a099768727cce2215 213 Pfam PF02798 Glutathione S-transferase, N-terminal domain 10 81 1.6E-18 T 15-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AM378_16550 218da93a656bed5a099768727cce2215 213 Gene3D G3DSA:1.20.1050.10 89 193 1.8E-81 T 15-10-2018 AM378_16550 218da93a656bed5a099768727cce2215 213 Pfam PF00043 Glutathione S-transferase, C-terminal domain 101 194 5.5E-12 T 15-10-2018 IPR004046 Glutathione S-transferase, C-terminal AM378_16550 218da93a656bed5a099768727cce2215 213 Gene3D G3DSA:3.40.30.10 11 202 1.8E-81 T 15-10-2018 AM378_16550 218da93a656bed5a099768727cce2215 213 SUPERFAMILY SSF47616 82 208 4.41E-27 T 15-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily AM378_15510 273840bf8f17c9596209f68b9b17ff19 458 Pfam PF00324 Amino acid permease 18 450 8.0E-117 T 15-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 AM378_15510 273840bf8f17c9596209f68b9b17ff19 458 ProSitePatterns PS00218 Amino acid permeases signature. 43 73 - T 15-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 AM378_15510 273840bf8f17c9596209f68b9b17ff19 458 PIRSF PIRSF006060 1 453 9.8E-74 T 15-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 AM378_15510 273840bf8f17c9596209f68b9b17ff19 458 Gene3D G3DSA:1.20.1740.10 9 456 1.2E-58 T 15-10-2018 AM378_15265 85458c9eff0884cadaf6c2606b40d973 418 Pfam PF07690 Major Facilitator Superfamily 33 380 8.2E-46 T 15-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM378_15265 85458c9eff0884cadaf6c2606b40d973 418 Gene3D G3DSA:1.20.1250.20 226 418 2.4E-36 T 15-10-2018 AM378_15265 85458c9eff0884cadaf6c2606b40d973 418 SUPERFAMILY SSF103473 15 417 1.7E-73 T 15-10-2018 IPR036259 MFS transporter superfamily AM378_15265 85458c9eff0884cadaf6c2606b40d973 418 Gene3D G3DSA:1.20.1250.20 19 214 4.4E-34 T 15-10-2018 AM378_10570 65acb98758576227b90e305f8ee2286a 217 Pfam PF01144 Coenzyme A transferase 7 202 1.8E-34 T 15-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 AM378_10570 65acb98758576227b90e305f8ee2286a 217 ProSitePatterns PS01274 Coenzyme A transferases signature 2. 45 53 - T 15-10-2018 IPR004164 Coenzyme A transferase active site GO:0008410 Reactome: R-HSA-77108 AM378_10570 65acb98758576227b90e305f8ee2286a 217 SMART SM00882 7 204 1.2E-63 T 15-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 AM378_10570 65acb98758576227b90e305f8ee2286a 217 SUPERFAMILY SSF100950 5 214 5.12E-60 T 15-10-2018 IPR037171 NagB/RpiA transferase-like AM378_10570 65acb98758576227b90e305f8ee2286a 217 Gene3D G3DSA:3.40.1080.10 2 214 6.3E-80 T 15-10-2018 AM378_10570 65acb98758576227b90e305f8ee2286a 217 TIGRFAM TIGR02428 pcaJ_scoB_fam: 3-oxoacid CoA-transferase, B subunit 5 209 4.7E-88 T 15-10-2018 IPR012791 3-oxoacid CoA-transferase, subunit B GO:0008410 Reactome: R-HSA-77108 AM378_03715 a5912ab2563405267b4dfca3278a30f1 168 Gene3D G3DSA:3.40.50.300 32 145 4.3E-27 T 15-10-2018 AM378_03715 a5912ab2563405267b4dfca3278a30f1 168 SUPERFAMILY SSF52540 32 146 3.35E-33 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_03715 a5912ab2563405267b4dfca3278a30f1 168 Pfam PF03846 Cell division inhibitor SulA 7 120 2.8E-54 T 15-10-2018 IPR004596 Cell division suppressor protein, SulA GO:0009432|GO:0051782 AM378_03715 a5912ab2563405267b4dfca3278a30f1 168 Hamap MF_01179 Cell division inhibitor SulA [sulA]. 1 168 43.443 T 15-10-2018 IPR004596 Cell division suppressor protein, SulA GO:0009432|GO:0051782 AM378_03715 a5912ab2563405267b4dfca3278a30f1 168 TIGRFAM TIGR00623 sula: cell division inhibitor SulA 3 168 4.2E-89 T 15-10-2018 IPR004596 Cell division suppressor protein, SulA GO:0009432|GO:0051782 AM378_03715 a5912ab2563405267b4dfca3278a30f1 168 PIRSF PIRSF003093 1 168 2.9E-87 T 15-10-2018 IPR004596 Cell division suppressor protein, SulA GO:0009432|GO:0051782 AM378_08305 492c319510ab9bd244cef5f71a81fbd2 336 Gene3D G3DSA:3.40.50.720 1 335 1.4E-100 T 15-10-2018 AM378_08305 492c319510ab9bd244cef5f71a81fbd2 336 SUPERFAMILY SSF51735 1 333 6.89E-91 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily AM378_08305 492c319510ab9bd244cef5f71a81fbd2 336 Pfam PF16363 GDP-mannose 4,6 dehydratase 4 324 5.4E-58 T 15-10-2018 IPR016040 NAD(P)-binding domain AM378_08305 492c319510ab9bd244cef5f71a81fbd2 336 PRINTS PR01713 Nucleotide sugar epimerase signature 216 231 1.7E-28 T 15-10-2018 AM378_08305 492c319510ab9bd244cef5f71a81fbd2 336 PRINTS PR01713 Nucleotide sugar epimerase signature 29 45 1.7E-28 T 15-10-2018 AM378_08305 492c319510ab9bd244cef5f71a81fbd2 336 PRINTS PR01713 Nucleotide sugar epimerase signature 295 312 1.7E-28 T 15-10-2018 AM378_08305 492c319510ab9bd244cef5f71a81fbd2 336 PRINTS PR01713 Nucleotide sugar epimerase signature 256 271 1.7E-28 T 15-10-2018 AM378_02595 1d4508a6ff39e1774943097a81cf0a0e 306 SUPERFAMILY SSF46785 1 109 1.14E-19 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM378_02595 1d4508a6ff39e1774943097a81cf0a0e 306 Gene3D G3DSA:3.40.190.290 89 294 6.4E-30 T 15-10-2018 AM378_02595 1d4508a6ff39e1774943097a81cf0a0e 306 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 1.2E-17 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_02595 1d4508a6ff39e1774943097a81cf0a0e 306 Gene3D G3DSA:1.10.10.10 1 87 6.1E-23 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_02595 1d4508a6ff39e1774943097a81cf0a0e 306 SUPERFAMILY SSF53850 85 289 4.1E-35 T 15-10-2018 AM378_02595 1d4508a6ff39e1774943097a81cf0a0e 306 Pfam PF03466 LysR substrate binding domain 85 285 2.6E-36 T 15-10-2018 IPR005119 LysR, substrate-binding AM378_10440 1ce62b5f52d4b1761cf374b011619dd3 297 SUPERFAMILY SSF46785 4 85 3.56E-22 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM378_10440 1ce62b5f52d4b1761cf374b011619dd3 297 Pfam PF03466 LysR substrate binding domain 90 295 3.1E-41 T 15-10-2018 IPR005119 LysR, substrate-binding AM378_10440 1ce62b5f52d4b1761cf374b011619dd3 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 1.4E-7 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_10440 1ce62b5f52d4b1761cf374b011619dd3 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 1.4E-7 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_10440 1ce62b5f52d4b1761cf374b011619dd3 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 1.4E-7 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_10440 1ce62b5f52d4b1761cf374b011619dd3 297 SUPERFAMILY SSF53850 92 295 3.26E-42 T 15-10-2018 AM378_10440 1ce62b5f52d4b1761cf374b011619dd3 297 Gene3D G3DSA:3.40.190.290 94 295 6.4E-53 T 15-10-2018 AM378_10440 1ce62b5f52d4b1761cf374b011619dd3 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 65 3.1E-20 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_10440 1ce62b5f52d4b1761cf374b011619dd3 297 Gene3D G3DSA:1.10.10.10 5 93 4.7E-23 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_02640 54f35f2c73363f3bb570ca403591d9ef 565 ProSitePatterns PS00331 Malic enzymes signature. 267 283 - T 15-10-2018 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 AM378_02640 54f35f2c73363f3bb570ca403591d9ef 565 PIRSF PIRSF000106 3 563 4.8E-228 T 15-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 AM378_02640 54f35f2c73363f3bb570ca403591d9ef 565 Gene3D G3DSA:3.40.50.720 269 565 7.1E-108 T 15-10-2018 AM378_02640 54f35f2c73363f3bb570ca403591d9ef 565 Hamap MF_01619 NAD-dependent malic enzyme [maeA]. 4 565 71.744 T 15-10-2018 IPR023667 NAD-dependent malic enzyme, proteobacteria GO:0004471|GO:0055114 KEGG: 00620+1.1.1.38|MetaCyc: PWY-6339 AM378_02640 54f35f2c73363f3bb570ca403591d9ef 565 SMART SM01274 81 261 6.8E-109 T 15-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 AM378_02640 54f35f2c73363f3bb570ca403591d9ef 565 SMART SM00919 271 531 1.9E-133 T 15-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 AM378_02640 54f35f2c73363f3bb570ca403591d9ef 565 PRINTS PR00072 Malic enzyme signature 408 424 1.0E-72 T 15-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 AM378_02640 54f35f2c73363f3bb570ca403591d9ef 565 PRINTS PR00072 Malic enzyme signature 87 111 1.0E-72 T 15-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 AM378_02640 54f35f2c73363f3bb570ca403591d9ef 565 PRINTS PR00072 Malic enzyme signature 242 260 1.0E-72 T 15-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 AM378_02640 54f35f2c73363f3bb570ca403591d9ef 565 PRINTS PR00072 Malic enzyme signature 147 176 1.0E-72 T 15-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 AM378_02640 54f35f2c73363f3bb570ca403591d9ef 565 PRINTS PR00072 Malic enzyme signature 183 205 1.0E-72 T 15-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 AM378_02640 54f35f2c73363f3bb570ca403591d9ef 565 PRINTS PR00072 Malic enzyme signature 267 283 1.0E-72 T 15-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 AM378_02640 54f35f2c73363f3bb570ca403591d9ef 565 PRINTS PR00072 Malic enzyme signature 298 314 1.0E-72 T 15-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 AM378_02640 54f35f2c73363f3bb570ca403591d9ef 565 SUPERFAMILY SSF51735 271 562 3.4E-94 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily AM378_02640 54f35f2c73363f3bb570ca403591d9ef 565 SUPERFAMILY SSF53223 6 270 7.91E-112 T 15-10-2018 AM378_02640 54f35f2c73363f3bb570ca403591d9ef 565 Pfam PF03949 Malic enzyme, NAD binding domain 271 530 1.2E-101 T 15-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 AM378_02640 54f35f2c73363f3bb570ca403591d9ef 565 Pfam PF00390 Malic enzyme, N-terminal domain 81 261 1.6E-78 T 15-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 AM378_02640 54f35f2c73363f3bb570ca403591d9ef 565 Gene3D G3DSA:3.40.50.10380 18 268 8.2E-116 T 15-10-2018 IPR037062 Malic enzyme, N-terminal domain superfamily GO:0004471|GO:0055114 AM378_10785 afcaba67d63657fb35b553d989f22e35 292 TIGRFAM TIGR00688 rarD: protein RarD 3 254 1.7E-56 T 15-10-2018 IPR004626 RarD protein GO:0005887 AM378_10785 afcaba67d63657fb35b553d989f22e35 292 SUPERFAMILY SSF103481 36 139 2.62E-8 T 15-10-2018 AM378_10785 afcaba67d63657fb35b553d989f22e35 292 Pfam PF00892 EamA-like transporter family 3 139 4.2E-7 T 15-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AM378_23980 2f4acdc635195211401fe52a4227f430 261 Gene3D G3DSA:3.30.450.180 107 261 8.5E-19 T 15-10-2018 AM378_23980 2f4acdc635195211401fe52a4227f430 261 Pfam PF13560 Helix-turn-helix domain 11 90 4.3E-18 T 15-10-2018 AM378_23980 2f4acdc635195211401fe52a4227f430 261 Gene3D G3DSA:1.10.260.40 30 106 3.1E-8 T 15-10-2018 AM378_23980 2f4acdc635195211401fe52a4227f430 261 SMART SM00530 15 87 6.0E-8 T 15-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM378_23980 2f4acdc635195211401fe52a4227f430 261 SUPERFAMILY SSF47413 35 86 2.73E-8 T 15-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AM378_06095 c4522856ffe40ca15ba63b1e3be59aff 378 ProSitePatterns PS00336 Beta-lactamase class-C active site. 76 83 - T 15-10-2018 IPR001586 Beta-lactamase, class-C active site GO:0008800|GO:0017001|GO:0030288 KEGG: 00311+3.5.2.6 AM378_06095 c4522856ffe40ca15ba63b1e3be59aff 378 Gene3D G3DSA:3.40.710.10 17 378 4.2E-123 T 15-10-2018 AM378_06095 c4522856ffe40ca15ba63b1e3be59aff 378 SUPERFAMILY SSF56601 21 375 1.44E-97 T 15-10-2018 IPR012338 Beta-lactamase/transpeptidase-like AM378_06095 c4522856ffe40ca15ba63b1e3be59aff 378 Pfam PF00144 Beta-lactamase 28 375 2.4E-81 T 15-10-2018 IPR001466 Beta-lactamase-related AM378_02415 1c9e14f6bde4b1f02974a3f8a138af32 490 Pfam PF00171 Aldehyde dehydrogenase family 15 479 6.3E-180 T 15-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 AM378_02415 1c9e14f6bde4b1f02974a3f8a138af32 490 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 251 258 - T 15-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 AM378_02415 1c9e14f6bde4b1f02974a3f8a138af32 490 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 279 290 - T 15-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 AM378_02415 1c9e14f6bde4b1f02974a3f8a138af32 490 SUPERFAMILY SSF53720 7 482 3.53E-172 T 15-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 AM378_02415 1c9e14f6bde4b1f02974a3f8a138af32 490 Gene3D G3DSA:3.40.309.10 255 486 2.3E-81 T 15-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 AM378_02415 1c9e14f6bde4b1f02974a3f8a138af32 490 Gene3D G3DSA:3.40.605.10 3 254 3.3E-104 T 15-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 AM378_02415 1c9e14f6bde4b1f02974a3f8a138af32 490 Hamap MF_00804 NAD/NADP-dependent betaine aldehyde dehydrogenase [betB]. 4 490 58.505 T 15-10-2018 IPR011264 Betaine aldehyde dehydrogenase GO:0008802|GO:0019285|GO:0046872 KEGG: 00260+1.2.1.8|MetaCyc: PWY-3722|MetaCyc: PWY-7494 AM378_02415 1c9e14f6bde4b1f02974a3f8a138af32 490 TIGRFAM TIGR01804 BADH: betaine-aldehyde dehydrogenase 10 477 3.9E-233 T 15-10-2018 IPR011264 Betaine aldehyde dehydrogenase GO:0008802|GO:0019285|GO:0046872 KEGG: 00260+1.2.1.8|MetaCyc: PWY-3722|MetaCyc: PWY-7494 AM378_11210 66da3b9251f9e436eb23991991ab9e2f 393 SUPERFAMILY SSF55031 185 298 1.03E-29 T 15-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain AM378_11210 66da3b9251f9e436eb23991991ab9e2f 393 Gene3D G3DSA:3.30.70.360 183 297 5.0E-136 T 15-10-2018 AM378_11210 66da3b9251f9e436eb23991991ab9e2f 393 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 17 376 2.8E-110 T 15-10-2018 IPR017439 Amidohydrolase GO:0016787 AM378_11210 66da3b9251f9e436eb23991991ab9e2f 393 SUPERFAMILY SSF53187 6 390 1.4E-90 T 15-10-2018 AM378_11210 66da3b9251f9e436eb23991991ab9e2f 393 Pfam PF07687 Peptidase dimerisation domain 187 283 1.3E-11 T 15-10-2018 IPR011650 Peptidase M20, dimerisation domain AM378_11210 66da3b9251f9e436eb23991991ab9e2f 393 Gene3D G3DSA:3.40.630.10 17 373 5.0E-136 T 15-10-2018 AM378_11210 66da3b9251f9e436eb23991991ab9e2f 393 PIRSF PIRSF005962 4 391 1.5E-128 T 15-10-2018 IPR017439 Amidohydrolase GO:0016787 AM378_11210 66da3b9251f9e436eb23991991ab9e2f 393 Pfam PF01546 Peptidase family M20/M25/M40 75 385 3.1E-36 T 15-10-2018 IPR002933 Peptidase M20 GO:0016787 AM378_24315 654c0a3c39b4554e177d4cfda59ce1c0 296 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 56 78 - T 15-10-2018 IPR030470 UbiA prenyltransferase conserved site AM378_24315 654c0a3c39b4554e177d4cfda59ce1c0 296 TIGRFAM TIGR01473 cyoE_ctaB: protoheme IX farnesyltransferase 3 281 2.5E-92 T 15-10-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 AM378_24315 654c0a3c39b4554e177d4cfda59ce1c0 296 Gene3D G3DSA:1.10.357.140 13 180 9.7E-21 T 15-10-2018 AM378_24315 654c0a3c39b4554e177d4cfda59ce1c0 296 Pfam PF01040 UbiA prenyltransferase family 18 266 1.2E-60 T 15-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 AM378_24315 654c0a3c39b4554e177d4cfda59ce1c0 296 Hamap MF_00154 Protoheme IX farnesyltransferase [cyoE]. 1 283 18.223 T 15-10-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 AM378_15920 805c6416e14da293f9c1e3595306e51b 757 SUPERFAMILY SSF101904 498 745 1.11E-51 T 15-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal AM378_15920 805c6416e14da293f9c1e3595306e51b 757 Gene3D G3DSA:1.10.268.10 345 484 1.5E-46 T 15-10-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily GO:0003677|GO:0003918|GO:0005524 Reactome: R-HSA-4615885 AM378_15920 805c6416e14da293f9c1e3595306e51b 757 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 597 632 0.0021 T 15-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 AM378_15920 805c6416e14da293f9c1e3595306e51b 757 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 645 696 2.2E-7 T 15-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 AM378_15920 805c6416e14da293f9c1e3595306e51b 757 Hamap MF_00936 DNA topoisomerase 4 subunit A [parC]. 5 743 34.275 T 15-10-2018 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AM378_15920 805c6416e14da293f9c1e3595306e51b 757 TIGRFAM TIGR01062 parC_Gneg: DNA topoisomerase IV, A subunit 9 743 0.0 T 15-10-2018 AM378_15920 805c6416e14da293f9c1e3595306e51b 757 SMART SM00434 12 462 3.0E-238 T 15-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AM378_15920 805c6416e14da293f9c1e3595306e51b 757 SUPERFAMILY SSF56719 32 483 4.05E-155 T 15-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 AM378_15920 805c6416e14da293f9c1e3595306e51b 757 Gene3D G3DSA:2.120.10.90 501 742 3.8E-10 T 15-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal AM378_15920 805c6416e14da293f9c1e3595306e51b 757 Gene3D G3DSA:3.30.1360.40 163 344 5.2E-71 T 15-10-2018 AM378_15920 805c6416e14da293f9c1e3595306e51b 757 Gene3D G3DSA:3.90.199.10 31 162 1.8E-59 T 15-10-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 AM378_15920 805c6416e14da293f9c1e3595306e51b 757 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 33 469 2.5E-134 T 15-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AM378_18325 25579a517b056cd010fd5bea4f18b547 302 Gene3D G3DSA:1.10.10.10 3 90 6.9E-26 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_18325 25579a517b056cd010fd5bea4f18b547 302 SUPERFAMILY SSF53850 89 299 4.52E-41 T 15-10-2018 AM378_18325 25579a517b056cd010fd5bea4f18b547 302 Pfam PF03466 LysR substrate binding domain 88 294 2.7E-40 T 15-10-2018 IPR005119 LysR, substrate-binding AM378_18325 25579a517b056cd010fd5bea4f18b547 302 SUPERFAMILY SSF46785 4 85 1.01E-20 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM378_18325 25579a517b056cd010fd5bea4f18b547 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 1.2E-18 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_18325 25579a517b056cd010fd5bea4f18b547 302 Gene3D G3DSA:3.40.190.290 91 295 3.8E-60 T 15-10-2018 AM378_01815 efcd5c9a3e1ddfe91cd0d2493b75de09 222 SUPERFAMILY SSF161098 13 209 9.94E-45 T 15-10-2018 IPR035906 MetI-like superfamily AM378_01815 efcd5c9a3e1ddfe91cd0d2493b75de09 222 Gene3D G3DSA:1.10.3720.10 9 222 1.7E-48 T 15-10-2018 IPR035906 MetI-like superfamily AM378_01815 efcd5c9a3e1ddfe91cd0d2493b75de09 222 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 36 222 6.6E-22 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AM378_07380 4a14646b9abcc9b30fcdda817b7f5d40 359 Gene3D G3DSA:3.40.50.1820 27 353 6.1E-38 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold AM378_07380 4a14646b9abcc9b30fcdda817b7f5d40 359 SUPERFAMILY SSF53474 26 352 5.02E-37 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold AM378_07380 4a14646b9abcc9b30fcdda817b7f5d40 359 Pfam PF12146 Serine aminopeptidase, S33 81 334 3.9E-17 T 15-10-2018 IPR022742 Serine aminopeptidase, S33 AM378_12520 680f8789ddc95ed90a63d941348d3bfb 561 Gene3D G3DSA:3.40.50.970 369 561 3.3E-57 T 15-10-2018 AM378_12520 680f8789ddc95ed90a63d941348d3bfb 561 SUPERFAMILY SSF52518 372 553 3.25E-53 T 15-10-2018 IPR029061 Thiamin diphosphate-binding fold AM378_12520 680f8789ddc95ed90a63d941348d3bfb 561 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 432 451 - T 15-10-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 AM378_12520 680f8789ddc95ed90a63d941348d3bfb 561 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 198 331 3.3E-28 T 15-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 AM378_12520 680f8789ddc95ed90a63d941348d3bfb 561 SUPERFAMILY SSF52518 7 184 1.08E-46 T 15-10-2018 IPR029061 Thiamin diphosphate-binding fold AM378_12520 680f8789ddc95ed90a63d941348d3bfb 561 Gene3D G3DSA:3.40.50.970 2 187 5.6E-62 T 15-10-2018 AM378_12520 680f8789ddc95ed90a63d941348d3bfb 561 SUPERFAMILY SSF52467 191 351 1.46E-36 T 15-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily AM378_12520 680f8789ddc95ed90a63d941348d3bfb 561 Gene3D G3DSA:3.40.50.1220 190 347 1.1E-37 T 15-10-2018 AM378_12520 680f8789ddc95ed90a63d941348d3bfb 561 TIGRFAM TIGR02418 acolac_catab: acetolactate synthase, catabolic 13 552 4.6E-257 T 15-10-2018 IPR012782 Acetolactate synthase, catabolic GO:0000287|GO:0003984|GO:0030976|GO:0034077 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 AM378_12520 680f8789ddc95ed90a63d941348d3bfb 561 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 395 540 2.8E-39 T 15-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 AM378_12520 680f8789ddc95ed90a63d941348d3bfb 561 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 13 180 3.8E-47 T 15-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 AM378_17300 1671b8ef36be3c274f22b5cc383b200f 309 TIGRFAM TIGR01001 metA: homoserine O-succinyltransferase 1 302 3.2E-159 T 15-10-2018 IPR005697 Homoserine O-succinyltransferase MetA GO:0005737|GO:0008899|GO:0019281 AM378_17300 1671b8ef36be3c274f22b5cc383b200f 309 ProDom PD037892 HOMOSERINE O-SUCCINYLTRANSFERASE TRANSFERASE ACYLTRANSFERASE BIOSYNTHESIS TRANSSUCCINYLASE HTS METHIONINE O- AMINO-ACID 36 289 8.0E-132 T 15-10-2018 AM378_17300 1671b8ef36be3c274f22b5cc383b200f 309 SUPERFAMILY SSF52317 18 297 1.24E-102 T 15-10-2018 IPR029062 Class I glutamine amidotransferase-like AM378_17300 1671b8ef36be3c274f22b5cc383b200f 309 Gene3D G3DSA:3.40.50.880 1 301 1.0E-120 T 15-10-2018 IPR029062 Class I glutamine amidotransferase-like AM378_17300 1671b8ef36be3c274f22b5cc383b200f 309 Hamap MF_00295 Homoserine O-succinyltransferase [metAS]. 31 299 41.225 T 15-10-2018 IPR033752 MetA family AM378_17300 1671b8ef36be3c274f22b5cc383b200f 309 PIRSF PIRSF000450 1 308 1.4E-146 T 15-10-2018 IPR033752 MetA family AM378_17300 1671b8ef36be3c274f22b5cc383b200f 309 Pfam PF04204 Homoserine O-succinyltransferase 2 299 9.2E-133 T 15-10-2018 IPR033752 MetA family AM378_20465 a0e000f5eea2dfa5cc0da760cf5fc86f 256 TIGRFAM TIGR00945 tatC: twin arginine-targeting protein translocase TatC 9 226 6.0E-78 T 15-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 AM378_20465 a0e000f5eea2dfa5cc0da760cf5fc86f 256 ProSitePatterns PS01218 TatC family signature. 154 173 - T 15-10-2018 IPR019820 Sec-independent periplasmic protein translocase, conserved site AM378_20465 a0e000f5eea2dfa5cc0da760cf5fc86f 256 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 85 103 1.1E-49 T 15-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 AM378_20465 a0e000f5eea2dfa5cc0da760cf5fc86f 256 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 8 35 1.1E-49 T 15-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 AM378_20465 a0e000f5eea2dfa5cc0da760cf5fc86f 256 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 103 129 1.1E-49 T 15-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 AM378_20465 a0e000f5eea2dfa5cc0da760cf5fc86f 256 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 154 182 1.1E-49 T 15-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 AM378_20465 a0e000f5eea2dfa5cc0da760cf5fc86f 256 Hamap MF_00902 Sec-independent protein translocase protein TatC [tatC]. 7 240 15.948 T 15-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 AM378_20465 a0e000f5eea2dfa5cc0da760cf5fc86f 256 Pfam PF00902 Sec-independent protein translocase protein (TatC) 12 221 2.9E-65 T 15-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 AM378_08635 de2382b8e8282aca504c617cc408b267 290 SUPERFAMILY SSF53697 94 277 1.28E-42 T 15-10-2018 AM378_08635 de2382b8e8282aca504c617cc408b267 290 Pfam PF01418 Helix-turn-helix domain, rpiR family 1 76 2.0E-29 T 15-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 AM378_08635 de2382b8e8282aca504c617cc408b267 290 Gene3D G3DSA:1.10.10.10 1 79 2.0E-27 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_08635 de2382b8e8282aca504c617cc408b267 290 SUPERFAMILY SSF46689 1 80 7.53E-21 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AM378_08635 de2382b8e8282aca504c617cc408b267 290 Gene3D G3DSA:3.40.50.10490 94 277 3.8E-42 T 15-10-2018 AM378_08635 de2382b8e8282aca504c617cc408b267 290 Pfam PF01380 SIS domain 124 252 9.1E-25 T 15-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 AM378_19985 fda761eb7eb584e75c5fd4f577ee4d7b 108 TIGRFAM TIGR01068 thioredoxin: thioredoxin 9 107 3.4E-39 T 15-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 AM378_19985 fda761eb7eb584e75c5fd4f577ee4d7b 108 Pfam PF00085 Thioredoxin 5 106 2.9E-34 T 15-10-2018 IPR013766 Thioredoxin domain GO:0045454 AM378_19985 fda761eb7eb584e75c5fd4f577ee4d7b 108 PRINTS PR00421 Thioredoxin family signature 24 32 3.8E-10 T 15-10-2018 AM378_19985 fda761eb7eb584e75c5fd4f577ee4d7b 108 PRINTS PR00421 Thioredoxin family signature 72 83 3.8E-10 T 15-10-2018 AM378_19985 fda761eb7eb584e75c5fd4f577ee4d7b 108 PRINTS PR00421 Thioredoxin family signature 32 41 3.8E-10 T 15-10-2018 AM378_19985 fda761eb7eb584e75c5fd4f577ee4d7b 108 Gene3D G3DSA:3.40.30.10 1 108 9.1E-38 T 15-10-2018 AM378_19985 fda761eb7eb584e75c5fd4f577ee4d7b 108 SUPERFAMILY SSF52833 2 107 1.4E-41 T 15-10-2018 IPR036249 Thioredoxin-like superfamily AM378_19985 fda761eb7eb584e75c5fd4f577ee4d7b 108 PIRSF PIRSF000077 2 108 6.6E-45 T 15-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 AM378_19985 fda761eb7eb584e75c5fd4f577ee4d7b 108 ProSitePatterns PS00194 Thioredoxin family active site. 25 43 - T 15-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 AM378_08010 d363246d83fa52b18b78c2657774056b 267 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 11 260 7.3E-33 T 15-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 AM378_08010 d363246d83fa52b18b78c2657774056b 267 Gene3D G3DSA:3.40.50.970 3 267 4.7E-79 T 15-10-2018 AM378_08010 d363246d83fa52b18b78c2657774056b 267 SUPERFAMILY SSF52518 3 265 5.4E-69 T 15-10-2018 IPR029061 Thiamin diphosphate-binding fold AM378_14760 2bd68824776de76116c9b8a2d9a09005 269 Pfam PF10703 MoaF N-terminal domain 14 118 2.5E-17 T 15-10-2018 IPR024724 Molybdenum cofactor biosynthesis protein F, N-terminal AM378_14760 2bd68824776de76116c9b8a2d9a09005 269 Pfam PF17409 MoaF C-terminal domain 151 257 9.4E-34 T 15-10-2018 IPR035348 MoaF, C-terminal domain AM378_11200 f08ed10bc4fde3040c87a836b37cfb05 355 Pfam PF00107 Zinc-binding dehydrogenase 189 306 1.2E-23 T 15-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AM378_11200 f08ed10bc4fde3040c87a836b37cfb05 355 Gene3D G3DSA:3.90.180.10 15 342 2.2E-93 T 15-10-2018 AM378_11200 f08ed10bc4fde3040c87a836b37cfb05 355 Gene3D G3DSA:3.40.50.720 166 303 2.2E-93 T 15-10-2018 AM378_11200 f08ed10bc4fde3040c87a836b37cfb05 355 SUPERFAMILY SSF51735 156 311 1.97E-36 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily AM378_11200 f08ed10bc4fde3040c87a836b37cfb05 355 SUPERFAMILY SSF50129 4 188 2.93E-43 T 15-10-2018 IPR011032 GroES-like superfamily AM378_11200 f08ed10bc4fde3040c87a836b37cfb05 355 SMART SM00829 15 353 0.0041 T 15-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AM378_11200 f08ed10bc4fde3040c87a836b37cfb05 355 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 71 85 - T 15-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 AM378_11200 f08ed10bc4fde3040c87a836b37cfb05 355 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 32 146 1.5E-25 T 15-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AM378_09940 914d2c6d7aed4da8a56e0b9f98bb660a 501 Pfam PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath 69 493 1.3E-193 T 15-10-2018 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath AM378_09940 914d2c6d7aed4da8a56e0b9f98bb660a 501 TIGRFAM TIGR03355 VI_chp_2: type VI secretion protein, EvpB/VC_A0108 family 19 493 8.6E-225 T 15-10-2018 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath AM378_11925 4eca729408e910187fcd55df5190ba72 228 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 28 219 3.0E-21 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AM378_11925 4eca729408e910187fcd55df5190ba72 228 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 7 114 1.6E-19 T 15-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 AM378_11925 4eca729408e910187fcd55df5190ba72 228 SUPERFAMILY SSF161098 7 205 4.97E-38 T 15-10-2018 IPR035906 MetI-like superfamily AM378_11925 4eca729408e910187fcd55df5190ba72 228 Gene3D G3DSA:1.10.3720.10 1 221 1.9E-48 T 15-10-2018 IPR035906 MetI-like superfamily AM378_08050 97fde86f10ef2e323074621433973b3f 348 Gene3D G3DSA:3.40.1750.20 201 265 2.9E-43 T 15-10-2018 AM378_08050 97fde86f10ef2e323074621433973b3f 348 Pfam PF08496 Peptidase family S49 N-terminal 2 157 2.1E-59 T 15-10-2018 IPR013703 Peptidase S49, N-terminal proteobacteria GO:0004252|GO:0005886 AM378_08050 97fde86f10ef2e323074621433973b3f 348 Pfam PF01343 Peptidase family S49 161 300 4.0E-45 T 15-10-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 AM378_08050 97fde86f10ef2e323074621433973b3f 348 SUPERFAMILY SSF52096 98 298 7.79E-31 T 15-10-2018 IPR029045 ClpP/crotonase-like domain superfamily AM378_08050 97fde86f10ef2e323074621433973b3f 348 Gene3D G3DSA:3.90.226.10 107 300 2.9E-43 T 15-10-2018 AM378_04920 2f6eb47a3ce3f69ffe30e3964ac4d604 260 SUPERFAMILY SSF161098 3 254 1.68E-56 T 15-10-2018 IPR035906 MetI-like superfamily AM378_04920 2f6eb47a3ce3f69ffe30e3964ac4d604 260 Gene3D G3DSA:1.10.3720.10 5 258 5.3E-49 T 15-10-2018 IPR035906 MetI-like superfamily AM378_04920 2f6eb47a3ce3f69ffe30e3964ac4d604 260 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 75 253 5.3E-19 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AM378_05050 e596e96b232246d739889c0c0841e97b 77 SUPERFAMILY SSF50182 23 75 1.2E-14 T 15-10-2018 IPR010920 LSM domain superfamily AM378_05050 e596e96b232246d739889c0c0841e97b 77 Gene3D G3DSA:2.30.30.100 21 77 3.1E-23 T 15-10-2018 AM378_05050 e596e96b232246d739889c0c0841e97b 77 Pfam PF06004 Bacterial protein of unknown function (DUF903) 26 74 1.0E-18 T 15-10-2018 IPR010305 Protein of unknown function DUF903 AM378_16025 6fb9e48f2eecdd8fe9d1111c83126758 476 Hamap MF_01603 Bifunctional protein HldE [hldE]. 4 474 43.283 T 15-10-2018 IPR023030 Bifunctional protein HldE GO:0016773|GO:0016779 KEGG: 00540+2.7.7.70+2.7.1.167 AM378_16025 6fb9e48f2eecdd8fe9d1111c83126758 476 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 51 74 - T 15-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 AM378_16025 6fb9e48f2eecdd8fe9d1111c83126758 476 Gene3D G3DSA:3.40.50.620 319 475 2.0E-37 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM378_16025 6fb9e48f2eecdd8fe9d1111c83126758 476 SUPERFAMILY SSF52374 340 471 9.01E-21 T 15-10-2018 AM378_16025 6fb9e48f2eecdd8fe9d1111c83126758 476 Gene3D G3DSA:3.40.1190.20 2 309 4.8E-112 T 15-10-2018 IPR029056 Ribokinase-like AM378_16025 6fb9e48f2eecdd8fe9d1111c83126758 476 TIGRFAM TIGR02198 rfaE_dom_I: bifunctional protein RfaE, domain I 6 312 1.5E-128 T 15-10-2018 IPR011913 RfaE bifunctional protein, domain I GO:0005975|GO:0016773|GO:0016779 KEGG: 00540+2.7.7.70+2.7.1.167 AM378_16025 6fb9e48f2eecdd8fe9d1111c83126758 476 Pfam PF00294 pfkB family carbohydrate kinase 13 305 2.3E-55 T 15-10-2018 IPR011611 Carbohydrate kinase PfkB AM378_16025 6fb9e48f2eecdd8fe9d1111c83126758 476 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 342 408 1.7E-17 T 15-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 AM378_16025 6fb9e48f2eecdd8fe9d1111c83126758 476 Pfam PF01467 Cytidylyltransferase-like 345 469 8.0E-15 T 15-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 AM378_16025 6fb9e48f2eecdd8fe9d1111c83126758 476 SUPERFAMILY SSF53613 12 309 1.22E-58 T 15-10-2018 IPR029056 Ribokinase-like AM378_16025 6fb9e48f2eecdd8fe9d1111c83126758 476 TIGRFAM TIGR02199 rfaE_dom_II: bifunctional protein RfaE, domain II 331 472 6.0E-63 T 15-10-2018 IPR011914 RfaE bifunctional protein, domain II GO:0005975|GO:0016773|GO:0016779 KEGG: 00540+2.7.7.70+2.7.1.167 AM378_14390 408cc32730c50c31fadc4ee0523fe5bc 252 Gene3D G3DSA:3.40.50.1010 1 161 6.2E-59 T 15-10-2018 AM378_14390 408cc32730c50c31fadc4ee0523fe5bc 252 Hamap MF_01192 Flap endonuclease Xni [xni]. 2 251 45.232 T 15-10-2018 IPR022895 Flap endonuclease Xni GO:0048256 AM378_14390 408cc32730c50c31fadc4ee0523fe5bc 252 Gene3D G3DSA:1.10.150.20 162 250 4.1E-27 T 15-10-2018 AM378_14390 408cc32730c50c31fadc4ee0523fe5bc 252 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 4 158 4.7E-32 T 15-10-2018 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 AM378_14390 408cc32730c50c31fadc4ee0523fe5bc 252 SUPERFAMILY SSF88723 4 159 4.81E-40 T 15-10-2018 IPR029060 PIN-like domain superfamily AM378_14390 408cc32730c50c31fadc4ee0523fe5bc 252 SMART SM00279 162 197 3.6E-9 T 15-10-2018 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 AM378_14390 408cc32730c50c31fadc4ee0523fe5bc 252 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 160 249 2.3E-24 T 15-10-2018 IPR020045 DNA polymerase I-like, H3TH domain GO:0003677|GO:0003824 AM378_14390 408cc32730c50c31fadc4ee0523fe5bc 252 SUPERFAMILY SSF47807 160 244 4.64E-23 T 15-10-2018 IPR036279 5'-3' exonuclease, C-terminal domain superfamily AM378_14390 408cc32730c50c31fadc4ee0523fe5bc 252 SMART SM00475 3 250 3.4E-91 T 15-10-2018 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 AM378_02395 7b4257576cb630536f8bd0b7a4e156f6 96 TIGRFAM TIGR02953 penta_MxKDx: pentapeptide MXKDX repeat protein 3 74 7.1E-16 T 15-10-2018 IPR014299 Pentapeptide MXKDX repeat protein AM378_02395 7b4257576cb630536f8bd0b7a4e156f6 96 TIGRFAM TIGR02953 penta_MxKDx: pentapeptide MXKDX repeat protein 42 94 5.9E-16 T 15-10-2018 IPR014299 Pentapeptide MXKDX repeat protein AM378_03395 d37e072a89bb445e77ede3136f7cefa6 579 Pfam PF00005 ABC transporter 356 503 1.0E-30 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM378_03395 d37e072a89bb445e77ede3136f7cefa6 579 TIGRFAM TIGR02868 CydC: thiol reductant ABC exporter, CydC subunit 7 534 1.3E-157 T 15-10-2018 IPR014223 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC GO:0016021|GO:0034775|GO:0042626|GO:0045454 AM378_03395 d37e072a89bb445e77ede3136f7cefa6 579 Pfam PF00664 ABC transporter transmembrane region 68 288 4.7E-9 T 15-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 AM378_03395 d37e072a89bb445e77ede3136f7cefa6 579 Gene3D G3DSA:3.40.50.300 331 576 1.6E-80 T 15-10-2018 AM378_03395 d37e072a89bb445e77ede3136f7cefa6 579 SMART SM00382 365 556 3.8E-15 T 15-10-2018 IPR003593 AAA+ ATPase domain AM378_03395 d37e072a89bb445e77ede3136f7cefa6 579 SUPERFAMILY SSF90123 7 327 1.7E-38 T 15-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 AM378_03395 d37e072a89bb445e77ede3136f7cefa6 579 ProSitePatterns PS00211 ABC transporters family signature. 476 490 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM378_03395 d37e072a89bb445e77ede3136f7cefa6 579 Gene3D G3DSA:1.20.1560.10 2 321 3.1E-26 T 15-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 AM378_03395 d37e072a89bb445e77ede3136f7cefa6 579 SUPERFAMILY SSF52540 336 572 1.88E-72 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_10865 4f5db389e3597b528c302f0752d431c3 306 Gene3D G3DSA:1.10.10.60 181 290 2.1E-26 T 15-10-2018 AM378_10865 4f5db389e3597b528c302f0752d431c3 306 Pfam PF12833 Helix-turn-helix domain 207 283 5.8E-19 T 15-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM378_10865 4f5db389e3597b528c302f0752d431c3 306 SUPERFAMILY SSF46689 237 290 7.62E-10 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AM378_10865 4f5db389e3597b528c302f0752d431c3 306 Pfam PF06719 AraC-type transcriptional regulator N-terminus 22 172 3.4E-40 T 15-10-2018 IPR009594 Transcription regulator HTH, AraC, N-terminal AM378_10865 4f5db389e3597b528c302f0752d431c3 306 SUPERFAMILY SSF46689 185 235 1.25E-11 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AM378_10865 4f5db389e3597b528c302f0752d431c3 306 SMART SM00342 201 284 6.5E-22 T 15-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM378_00995 b4bea84e4912e4cab752d62216e1d44f 214 Hamap MF_00417 Pyrrolidone-carboxylate peptidase [pcp]. 2 200 41.876 T 15-10-2018 IPR029762 Pyroglutamyl peptidase I, bacterial-type GO:0005829|GO:0006508|GO:0008234|GO:0016920 MetaCyc: PWY-7942 AM378_00995 b4bea84e4912e4cab752d62216e1d44f 214 PIRSF PIRSF015592 1 212 1.2E-87 T 15-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 AM378_00995 b4bea84e4912e4cab752d62216e1d44f 214 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 161 173 1.3E-48 T 15-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 AM378_00995 b4bea84e4912e4cab752d62216e1d44f 214 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 80 100 1.3E-48 T 15-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 AM378_00995 b4bea84e4912e4cab752d62216e1d44f 214 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 132 148 1.3E-48 T 15-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 AM378_00995 b4bea84e4912e4cab752d62216e1d44f 214 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 62 74 1.3E-48 T 15-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 AM378_00995 b4bea84e4912e4cab752d62216e1d44f 214 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 4 27 1.3E-48 T 15-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 AM378_00995 b4bea84e4912e4cab752d62216e1d44f 214 ProSitePatterns PS01333 Pyrrolidone-carboxylate peptidase glutamic acid active site. 69 85 - T 15-10-2018 IPR033693 Pyroglutamyl peptidase I, Glu active site MetaCyc: PWY-7942 AM378_00995 b4bea84e4912e4cab752d62216e1d44f 214 TIGRFAM TIGR00504 pyro_pdase: pyroglutamyl-peptidase I 3 211 8.1E-91 T 15-10-2018 IPR029762 Pyroglutamyl peptidase I, bacterial-type GO:0005829|GO:0006508|GO:0008234|GO:0016920 MetaCyc: PWY-7942 AM378_00995 b4bea84e4912e4cab752d62216e1d44f 214 Pfam PF01470 Pyroglutamyl peptidase 3 201 3.8E-82 T 15-10-2018 IPR016125 Peptidase C15, pyroglutamyl peptidase I-like MetaCyc: PWY-7942 AM378_00995 b4bea84e4912e4cab752d62216e1d44f 214 ProSitePatterns PS01334 Pyrrolidone-carboxylate peptidase cysteine active site. 130 144 - T 15-10-2018 IPR033694 Pyroglutamyl peptidase I, Cys active site MetaCyc: PWY-7942 AM378_00995 b4bea84e4912e4cab752d62216e1d44f 214 SUPERFAMILY SSF53182 1 214 4.45E-74 T 15-10-2018 IPR036440 Peptidase C15, pyroglutamyl peptidase I-like superfamily MetaCyc: PWY-7942 AM378_00995 b4bea84e4912e4cab752d62216e1d44f 214 Gene3D G3DSA:3.40.630.20 1 214 5.4E-84 T 15-10-2018 IPR036440 Peptidase C15, pyroglutamyl peptidase I-like superfamily MetaCyc: PWY-7942 AM378_24250 04df9385c9ab1756b5aed04b706ca4db 330 Hamap MF_02128 Thiamine-monophosphate kinase [thiL]. 3 322 29.026 T 15-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 AM378_24250 04df9385c9ab1756b5aed04b706ca4db 330 Pfam PF02769 AIR synthase related protein, C-terminal domain 151 296 3.7E-9 T 15-10-2018 IPR010918 PurM-like, C-terminal domain AM378_24250 04df9385c9ab1756b5aed04b706ca4db 330 SUPERFAMILY SSF56042 143 308 7.78E-40 T 15-10-2018 IPR036676 PurM-like, C-terminal domain superfamily AM378_24250 04df9385c9ab1756b5aed04b706ca4db 330 Gene3D G3DSA:3.30.1330.10 2 144 6.7E-46 T 15-10-2018 IPR036921 PurM-like, N-terminal domain superfamily AM378_24250 04df9385c9ab1756b5aed04b706ca4db 330 SUPERFAMILY SSF55326 4 138 6.98E-35 T 15-10-2018 IPR036921 PurM-like, N-terminal domain superfamily AM378_24250 04df9385c9ab1756b5aed04b706ca4db 330 TIGRFAM TIGR01379 thiL: thiamine-phosphate kinase 4 322 5.7E-115 T 15-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 AM378_24250 04df9385c9ab1756b5aed04b706ca4db 330 Pfam PF00586 AIR synthase related protein, N-terminal domain 29 137 1.5E-22 T 15-10-2018 IPR016188 PurM-like, N-terminal domain AM378_24250 04df9385c9ab1756b5aed04b706ca4db 330 PIRSF PIRSF005303 1 322 1.7E-89 T 15-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 AM378_24250 04df9385c9ab1756b5aed04b706ca4db 330 Gene3D G3DSA:3.90.650.10 145 323 8.2E-57 T 15-10-2018 IPR036676 PurM-like, C-terminal domain superfamily AM378_18900 91b293e5bba5eded4ec5edcb63c8a48e 388 Pfam PF13439 Glycosyltransferase Family 4 13 159 2.3E-8 T 15-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 AM378_18900 91b293e5bba5eded4ec5edcb63c8a48e 388 SUPERFAMILY SSF53756 5 383 3.53E-45 T 15-10-2018 AM378_18900 91b293e5bba5eded4ec5edcb63c8a48e 388 Pfam PF00534 Glycosyl transferases group 1 180 302 1.4E-22 T 15-10-2018 IPR001296 Glycosyl transferase, family 1 AM378_18900 91b293e5bba5eded4ec5edcb63c8a48e 388 Gene3D G3DSA:3.40.50.2000 7 176 1.4E-5 T 15-10-2018 AM378_18900 91b293e5bba5eded4ec5edcb63c8a48e 388 Gene3D G3DSA:3.40.50.2000 177 370 1.4E-28 T 15-10-2018 AM378_11240 e5245fbcbf2d03d0568208cebe1db216 369 Gene3D G3DSA:3.40.50.720 1 323 1.2E-50 T 15-10-2018 AM378_11240 e5245fbcbf2d03d0568208cebe1db216 369 SUPERFAMILY SSF51735 1 353 3.36E-32 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily AM378_11240 e5245fbcbf2d03d0568208cebe1db216 369 Pfam PF07993 Male sterility protein 6 237 1.5E-35 T 15-10-2018 IPR013120 Male sterility, NAD-binding Reactome: R-HSA-8848584 AM378_13580 0aaa2c9ba157afc61a1d8e936db1f56a 243 Hamap MF_00279 Pyridoxine 5'-phosphate synthase [pdxJ]. 1 243 133.211 T 15-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 AM378_13580 0aaa2c9ba157afc61a1d8e936db1f56a 243 Gene3D G3DSA:3.20.20.70 1 243 3.2E-109 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM378_13580 0aaa2c9ba157afc61a1d8e936db1f56a 243 TIGRFAM TIGR00559 pdxJ: pyridoxine 5'-phosphate synthase 6 239 7.3E-104 T 15-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 AM378_13580 0aaa2c9ba157afc61a1d8e936db1f56a 243 SUPERFAMILY SSF63892 4 242 2.22E-101 T 15-10-2018 IPR036130 Pyridoxine 5'-phosphate synthase GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 AM378_13580 0aaa2c9ba157afc61a1d8e936db1f56a 243 Pfam PF03740 Pyridoxal phosphate biosynthesis protein PdxJ 6 238 8.8E-104 T 15-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 AM378_20920 8908f6ea9d9ae45d7588384353e089b9 342 Pfam PF04055 Radical SAM superfamily 118 195 2.8E-7 T 15-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AM378_20920 8908f6ea9d9ae45d7588384353e089b9 342 Gene3D G3DSA:3.20.20.70 51 334 5.8E-93 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM378_20920 8908f6ea9d9ae45d7588384353e089b9 342 SUPERFAMILY SSF102114 102 324 1.83E-26 T 15-10-2018 AM378_20920 8908f6ea9d9ae45d7588384353e089b9 342 Pfam PF13353 4Fe-4S single cluster domain 111 181 1.6E-6 T 15-10-2018 AM378_20920 8908f6ea9d9ae45d7588384353e089b9 342 TIGRFAM TIGR03821 EFP_modif_epmB: EF-P beta-lysylation protein EpmB 15 335 2.2E-159 T 15-10-2018 IPR022462 Lysine-2,3-aminomutase-like AM378_20920 8908f6ea9d9ae45d7588384353e089b9 342 TIGRFAM TIGR00238 TIGR00238: KamA family protein 3 328 3.4E-134 T 15-10-2018 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase AM378_20920 8908f6ea9d9ae45d7588384353e089b9 342 PIRSF PIRSF004911 1 342 8.7E-122 T 15-10-2018 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase AM378_03745 8f5842c679456ca0766ffa7814cf19e4 221 Hamap MF_00789 UPF0319 protein YccT [yccT]. 2 217 26.139 T 15-10-2018 IPR018635 Uncharacterised protein family UPF0319 AM378_03745 8f5842c679456ca0766ffa7814cf19e4 221 Pfam PF09829 Uncharacterized protein conserved in bacteria (DUF2057) 21 214 6.1E-52 T 15-10-2018 IPR018635 Uncharacterised protein family UPF0319 AM378_12985 51c1ac83f12b9c0c398d8f91a69b36af 1993 SMART SM00912 46 169 1.5E-44 T 15-10-2018 IPR008638 Filamentous haemagglutinin, N-terminal AM378_12985 51c1ac83f12b9c0c398d8f91a69b36af 1993 Gene3D G3DSA:2.160.20.10 32 329 2.8E-96 T 15-10-2018 IPR012334 Pectin lyase fold AM378_12985 51c1ac83f12b9c0c398d8f91a69b36af 1993 Gene3D G3DSA:3.30.305.10 1037 1147 1.7E-6 T 15-10-2018 IPR038452 Channel forming colicin, central receptor recognition domain superfamily AM378_12985 51c1ac83f12b9c0c398d8f91a69b36af 1993 TIGRFAM TIGR01901 adhes_NPXG: filamentous hemagglutinin family N-terminal domain 64 164 2.9E-23 T 15-10-2018 IPR008638 Filamentous haemagglutinin, N-terminal AM378_12985 51c1ac83f12b9c0c398d8f91a69b36af 1993 Pfam PF05860 haemagglutination activity domain 37 168 1.6E-34 T 15-10-2018 IPR008638 Filamentous haemagglutinin, N-terminal AM378_12985 51c1ac83f12b9c0c398d8f91a69b36af 1993 SUPERFAMILY SSF58096 988 1195 5.1E-6 T 15-10-2018 IPR014739 Channel forming colicin, N-terminal domain superfamily GO:0016021|GO:0019835|GO:0050829 AM378_12985 51c1ac83f12b9c0c398d8f91a69b36af 1993 SUPERFAMILY SSF51126 41 294 1.32E-61 T 15-10-2018 IPR011050 Pectin lyase fold/virulence factor AM378_12985 51c1ac83f12b9c0c398d8f91a69b36af 1993 Pfam PF14424 The BURPS668_1122 family of deaminases 1859 1983 5.9E-27 T 15-10-2018 IPR032721 Deaminases, BURPS668_1122 family AM378_12985 51c1ac83f12b9c0c398d8f91a69b36af 1993 Pfam PF04830 Possible hemagglutinin (DUF637) 1442 1612 6.8E-51 T 15-10-2018 IPR006915 Domain of unknown function DUF637, haemagglutinin putative AM378_01955 117a1c37468445f40a170575e2f6f4a2 289 Pfam PF03466 LysR substrate binding domain 92 286 4.3E-28 T 15-10-2018 IPR005119 LysR, substrate-binding AM378_01955 117a1c37468445f40a170575e2f6f4a2 289 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 67 5.4E-19 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_01955 117a1c37468445f40a170575e2f6f4a2 289 Gene3D G3DSA:3.40.190.10 165 261 1.4E-51 T 15-10-2018 AM378_01955 117a1c37468445f40a170575e2f6f4a2 289 Gene3D G3DSA:1.10.10.10 1 88 1.0E-23 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_01955 117a1c37468445f40a170575e2f6f4a2 289 SUPERFAMILY SSF53850 92 287 7.06E-29 T 15-10-2018 AM378_01955 117a1c37468445f40a170575e2f6f4a2 289 Gene3D G3DSA:3.40.190.10 98 268 1.4E-51 T 15-10-2018 AM378_01955 117a1c37468445f40a170575e2f6f4a2 289 SUPERFAMILY SSF46785 4 114 3.8E-24 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM378_04000 37e55643c488bab4bd0ba93088e88c75 374 Gene3D G3DSA:3.50.50.60 8 349 2.5E-60 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AM378_04000 37e55643c488bab4bd0ba93088e88c75 374 Gene3D G3DSA:3.30.9.10 85 308 2.5E-60 T 15-10-2018 AM378_04000 37e55643c488bab4bd0ba93088e88c75 374 SUPERFAMILY SSF51905 7 365 1.81E-37 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AM378_04000 37e55643c488bab4bd0ba93088e88c75 374 SUPERFAMILY SSF54373 209 307 1.57E-9 T 15-10-2018 AM378_04000 37e55643c488bab4bd0ba93088e88c75 374 Pfam PF01266 FAD dependent oxidoreductase 8 347 8.8E-48 T 15-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 AM378_11115 01ecd892d846a5fc13e39db539c48cde 188 Pfam PF09695 Bacterial protein of unknown function (YtfJ_HI0045) 25 181 9.2E-62 T 15-10-2018 IPR006513 Conserved hypothetical protein CHP01626, YtfJ AM378_11115 01ecd892d846a5fc13e39db539c48cde 188 TIGRFAM TIGR01626 ytfJ_HI0045: conserved hypothetical protein YtfJ-family, TIGR01626 1 182 4.7E-70 T 15-10-2018 IPR006513 Conserved hypothetical protein CHP01626, YtfJ AM378_19775 16c8105e937c67319f5cc2d0fa8c432d 481 Pfam PF02321 Outer membrane efflux protein 281 459 4.6E-23 T 15-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 AM378_19775 16c8105e937c67319f5cc2d0fa8c432d 481 Pfam PF02321 Outer membrane efflux protein 56 249 3.9E-30 T 15-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 AM378_19775 16c8105e937c67319f5cc2d0fa8c432d 481 SUPERFAMILY SSF56954 4 465 2.09E-104 T 15-10-2018 AM378_19775 16c8105e937c67319f5cc2d0fa8c432d 481 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 8 461 8.7E-105 T 15-10-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0016020|GO:0022857|GO:0055085 AM378_19775 16c8105e937c67319f5cc2d0fa8c432d 481 Gene3D G3DSA:2.20.200.10 93 350 1.4E-131 T 15-10-2018 AM378_19775 16c8105e937c67319f5cc2d0fa8c432d 481 Gene3D G3DSA:1.20.1600.10 46 462 1.4E-131 T 15-10-2018 AM378_06435 e8f53af402cc1c2aa2b5fbc59588515c 298 Pfam PF00753 Metallo-beta-lactamase superfamily 62 248 4.7E-22 T 15-10-2018 IPR001279 Metallo-beta-lactamase AM378_06435 e8f53af402cc1c2aa2b5fbc59588515c 298 Gene3D G3DSA:3.60.15.10 3 297 4.5E-105 T 15-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AM378_06435 e8f53af402cc1c2aa2b5fbc59588515c 298 SUPERFAMILY SSF56281 3 289 4.46E-49 T 15-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AM378_06435 e8f53af402cc1c2aa2b5fbc59588515c 298 SMART SM00849 64 269 5.6E-24 T 15-10-2018 IPR001279 Metallo-beta-lactamase AM378_22520 8875006ee5162fdd45730860ffd415f5 388 Pfam PF06965 Na+/H+ antiporter 1 7 379 7.8E-149 T 15-10-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 AM378_22520 8875006ee5162fdd45730860ffd415f5 388 Hamap MF_01844 Na(+)/H(+) antiporter NhaA [nhaA]. 5 386 23.526 T 15-10-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 AM378_22520 8875006ee5162fdd45730860ffd415f5 388 TIGRFAM TIGR00773 NhaA: Na+/H+ antiporter NhaA 8 380 2.6E-171 T 15-10-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 AM378_22520 8875006ee5162fdd45730860ffd415f5 388 Gene3D G3DSA:1.20.1530.10 2 387 3.0E-153 T 15-10-2018 IPR023171 Na/H antiporter domain superfamily AM378_18795 6ff3e50440ab1b726026e820209034b8 320 PIRSF PIRSF000532 1 320 6.9E-132 T 15-10-2018 IPR012003 ATP-dependent 6-phosphofructokinase, prokaryotic-type GO:0005524|GO:0006002|GO:0006096|GO:0008443 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 AM378_18795 6ff3e50440ab1b726026e820209034b8 320 Pfam PF00365 Phosphofructokinase 4 276 3.3E-109 T 15-10-2018 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 AM378_18795 6ff3e50440ab1b726026e820209034b8 320 Gene3D G3DSA:3.40.50.450 4 287 1.7E-118 T 15-10-2018 AM378_18795 6ff3e50440ab1b726026e820209034b8 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 32 45 6.9E-83 T 15-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 AM378_18795 6ff3e50440ab1b726026e820209034b8 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 139 157 6.9E-83 T 15-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 AM378_18795 6ff3e50440ab1b726026e820209034b8 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 159 175 6.9E-83 T 15-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 AM378_18795 6ff3e50440ab1b726026e820209034b8 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 121 138 6.9E-83 T 15-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 AM378_18795 6ff3e50440ab1b726026e820209034b8 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 94 110 6.9E-83 T 15-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 AM378_18795 6ff3e50440ab1b726026e820209034b8 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 240 262 6.9E-83 T 15-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 AM378_18795 6ff3e50440ab1b726026e820209034b8 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 213 225 6.9E-83 T 15-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 AM378_18795 6ff3e50440ab1b726026e820209034b8 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 7 26 6.9E-83 T 15-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 AM378_18795 6ff3e50440ab1b726026e820209034b8 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 177 194 6.9E-83 T 15-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 AM378_18795 6ff3e50440ab1b726026e820209034b8 320 ProSitePatterns PS00433 Phosphofructokinase signature. 244 262 - T 15-10-2018 IPR015912 Phosphofructokinase, conserved site GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 AM378_18795 6ff3e50440ab1b726026e820209034b8 320 TIGRFAM TIGR02482 PFKA_ATP: 6-phosphofructokinase 4 301 1.0E-126 T 15-10-2018 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic GO:0003872|GO:0005524|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 AM378_18795 6ff3e50440ab1b726026e820209034b8 320 SUPERFAMILY SSF53784 3 310 7.32E-114 T 15-10-2018 IPR035966 Phosphofructokinase superfamily GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 AM378_18795 6ff3e50440ab1b726026e820209034b8 320 Hamap MF_00339 ATP-dependent 6-phosphofructokinase [pfkA]. 2 320 46.889 T 15-10-2018 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic GO:0003872|GO:0005524|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 AM378_18795 6ff3e50440ab1b726026e820209034b8 320 Gene3D G3DSA:3.40.50.460 143 252 1.7E-118 T 15-10-2018 AM378_22140 407a58dbfffa17637ac347b0b61fae1f 128 SUPERFAMILY SSF55331 2 125 7.94E-45 T 15-10-2018 IPR014347 Tautomerase/MIF superfamily AM378_22140 407a58dbfffa17637ac347b0b61fae1f 128 Gene3D G3DSA:3.30.429.10 2 126 2.0E-50 T 15-10-2018 IPR014347 Tautomerase/MIF superfamily AM378_22140 407a58dbfffa17637ac347b0b61fae1f 128 Pfam PF02962 5-carboxymethyl-2-hydroxymuconate isomerase 2 124 1.1E-25 T 15-10-2018 IPR004220 5-carboxymethyl-2-hydroxymuconate isomerase GO:0008704|GO:0019439 KEGG: 00350+5.3.3.10 AM378_16560 4967b46702077351b0e8cd6bc2bff9d0 130 Gene3D G3DSA:3.30.230.10 1 130 2.2E-54 T 15-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AM378_16560 4967b46702077351b0e8cd6bc2bff9d0 130 SUPERFAMILY SSF54211 5 130 2.69E-49 T 15-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AM378_16560 4967b46702077351b0e8cd6bc2bff9d0 130 Pfam PF00380 Ribosomal protein S9/S16 10 130 1.3E-46 T 15-10-2018 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 AM378_16560 4967b46702077351b0e8cd6bc2bff9d0 130 ProSitePatterns PS00360 Ribosomal protein S9 signature. 69 87 - T 15-10-2018 IPR020574 Ribosomal protein S9, conserved site GO:0003735|GO:0005840|GO:0006412 AM378_16560 4967b46702077351b0e8cd6bc2bff9d0 130 Hamap MF_00532_B 30S ribosomal protein S9 [rpsI]. 1 130 33.979 T 15-10-2018 IPR023035 Ribosomal protein S9, bacterial/plastid AM378_01625 db112957c39d558983b0fa78bba04f97 306 SUPERFAMILY SSF53850 92 292 9.95E-32 T 15-10-2018 AM378_01625 db112957c39d558983b0fa78bba04f97 306 Gene3D G3DSA:3.40.190.10 161 257 4.4E-48 T 15-10-2018 AM378_01625 db112957c39d558983b0fa78bba04f97 306 SUPERFAMILY SSF46785 3 85 2.72E-22 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM378_01625 db112957c39d558983b0fa78bba04f97 306 Pfam PF03466 LysR substrate binding domain 90 288 6.1E-32 T 15-10-2018 IPR005119 LysR, substrate-binding AM378_01625 db112957c39d558983b0fa78bba04f97 306 Gene3D G3DSA:3.40.190.10 100 284 4.4E-48 T 15-10-2018 AM378_01625 db112957c39d558983b0fa78bba04f97 306 Gene3D G3DSA:1.10.10.10 7 96 4.2E-25 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_01625 db112957c39d558983b0fa78bba04f97 306 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 66 3.5E-19 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_01625 db112957c39d558983b0fa78bba04f97 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 2.4E-9 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_01625 db112957c39d558983b0fa78bba04f97 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 2.4E-9 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_01625 db112957c39d558983b0fa78bba04f97 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 2.4E-9 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_20860 1974da7e470c482edf0cd61489a311e5 206 Pfam PF09997 Predicted membrane protein (DUF2238) 42 182 4.5E-54 T 15-10-2018 IPR014509 Uncharacterised conserved protein UCP020606 AM378_20860 1974da7e470c482edf0cd61489a311e5 206 PIRSF PIRSF020606 1 204 8.5E-76 T 15-10-2018 IPR014509 Uncharacterised conserved protein UCP020606 AM378_21980 5c8420399c60bbe56e593025f86cb49d 61 SUPERFAMILY SSF47413 4 61 2.02E-12 T 15-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AM378_21980 5c8420399c60bbe56e593025f86cb49d 61 Pfam PF01381 Helix-turn-helix 6 50 2.7E-8 T 15-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM378_21980 5c8420399c60bbe56e593025f86cb49d 61 SMART SM00530 5 59 0.0055 T 15-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM378_21980 5c8420399c60bbe56e593025f86cb49d 61 Gene3D G3DSA:1.10.260.40 1 59 1.0E-15 T 15-10-2018 AM378_16700 466426542c88f91c949791d60a57021f 379 SUPERFAMILY SSF51338 1 340 8.48E-12 T 15-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 AM378_16700 466426542c88f91c949791d60a57021f 379 SUPERFAMILY SSF51556 53 318 5.51E-73 T 15-10-2018 IPR032466 Metal-dependent hydrolase AM378_16700 466426542c88f91c949791d60a57021f 379 Pfam PF01979 Amidohydrolase family 253 342 1.4E-8 T 15-10-2018 IPR006680 Amidohydrolase-related GO:0016787 AM378_16700 466426542c88f91c949791d60a57021f 379 Gene3D G3DSA:3.20.20.140 53 318 1.6E-118 T 15-10-2018 AM378_16700 466426542c88f91c949791d60a57021f 379 PIRSF PIRSF039004 1 377 2.2E-129 T 15-10-2018 IPR020043 Deacetylase Atu3266-like GO:0019213 AM378_16700 466426542c88f91c949791d60a57021f 379 Gene3D G3DSA:2.30.40.10 5 364 1.6E-118 T 15-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 AM378_16700 466426542c88f91c949791d60a57021f 379 TIGRFAM TIGR03583 EF_0837: putative amidohydrolase, EF_0837/AHA_3915 family 2 366 1.6E-162 T 15-10-2018 IPR020043 Deacetylase Atu3266-like GO:0019213 AM378_19975 c61074b02236b7ed3f4eae19a62d4464 498 TIGRFAM TIGR03706 exo_poly_only: exopolyphosphatase 8 300 9.6E-94 T 15-10-2018 IPR022371 Exopolyphosphatase GO:0004309|GO:0006793 AM378_19975 c61074b02236b7ed3f4eae19a62d4464 498 Gene3D G3DSA:1.10.3210.10 305 498 5.0E-50 T 15-10-2018 AM378_19975 c61074b02236b7ed3f4eae19a62d4464 498 Gene3D G3DSA:3.30.420.150 112 289 1.3E-87 T 15-10-2018 AM378_19975 c61074b02236b7ed3f4eae19a62d4464 498 SUPERFAMILY SSF53067 7 128 2.89E-38 T 15-10-2018 AM378_19975 c61074b02236b7ed3f4eae19a62d4464 498 SUPERFAMILY SSF109604 307 496 6.12E-46 T 15-10-2018 AM378_19975 c61074b02236b7ed3f4eae19a62d4464 498 PIRSF PIRSF001267 1 497 1.2E-185 T 15-10-2018 IPR030673 Pyrophosphatase, GppA/Ppx-type KEGG: 00230+3.6.1.40 AM378_19975 c61074b02236b7ed3f4eae19a62d4464 498 Hamap MF_01550 Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [gppA]. 2 495 54.224 T 15-10-2018 IPR023709 Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase GO:0008894|GO:0015974 KEGG: 00230+3.6.1.40 AM378_19975 c61074b02236b7ed3f4eae19a62d4464 498 SUPERFAMILY SSF53067 132 300 1.59E-42 T 15-10-2018 AM378_19975 c61074b02236b7ed3f4eae19a62d4464 498 Gene3D G3DSA:3.30.420.40 9 297 1.3E-87 T 15-10-2018 AM378_19975 c61074b02236b7ed3f4eae19a62d4464 498 Pfam PF02541 Ppx/GppA phosphatase family 21 301 5.4E-98 T 15-10-2018 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40 AM378_21260 97c41b47561e920c8f97a50e8c6eafa9 103 SUPERFAMILY SSF141091 1 102 6.41E-37 T 15-10-2018 IPR036164 L21-like superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM378_21260 97c41b47561e920c8f97a50e8c6eafa9 103 Pfam PF00829 Ribosomal prokaryotic L21 protein 1 101 8.2E-38 T 15-10-2018 IPR028909 Ribosomal protein L21-like GO:0005840 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM378_21260 97c41b47561e920c8f97a50e8c6eafa9 103 TIGRFAM TIGR00061 L21: ribosomal protein bL21 2 101 5.2E-45 T 15-10-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM378_21260 97c41b47561e920c8f97a50e8c6eafa9 103 ProSitePatterns PS01169 Ribosomal protein L21 signature. 72 94 - T 15-10-2018 IPR018258 Ribosomal protein L21, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM378_21260 97c41b47561e920c8f97a50e8c6eafa9 103 Hamap MF_01363 50S ribosomal protein L21 [rplU]. 1 103 26.867 T 15-10-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM378_20310 f247ca3431fdd6fa27fcebc4d75ec3bf 317 PIRSF PIRSF003097 16 313 4.2E-92 T 15-10-2018 IPR004513 Cell division protein FtsX GO:0016021 AM378_20310 f247ca3431fdd6fa27fcebc4d75ec3bf 317 TIGRFAM TIGR00439 ftsX: putative protein insertion permease FtsX 19 316 6.6E-128 T 15-10-2018 IPR004513 Cell division protein FtsX GO:0016021 AM378_14205 ae7567315a918c6f45528ca51ec95927 483 SUPERFAMILY SSF103473 4 193 5.1E-24 T 15-10-2018 IPR036259 MFS transporter superfamily AM378_14205 ae7567315a918c6f45528ca51ec95927 483 ProSitePatterns PS01023 PTR2 family proton/oligopeptide symporters signature 2. 139 151 - T 15-10-2018 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: R-HSA-427975 AM378_14205 ae7567315a918c6f45528ca51ec95927 483 ProSitePatterns PS01022 PTR2 family proton/oligopeptide symporters signature 1. 64 88 - T 15-10-2018 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: R-HSA-427975 AM378_14205 ae7567315a918c6f45528ca51ec95927 483 TIGRFAM TIGR00924 yjdL_sub1_fam: amino acid/peptide transporter (Peptide:H+ symporter) 6 451 4.6E-82 T 15-10-2018 IPR005279 Dipeptide/tripeptide permease GO:0015833|GO:0016020|GO:1904680 AM378_14205 ae7567315a918c6f45528ca51ec95927 483 Pfam PF00854 POT family 77 438 8.8E-75 T 15-10-2018 IPR000109 Proton-dependent oligopeptide transporter family GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-427975 AM378_14205 ae7567315a918c6f45528ca51ec95927 483 Gene3D G3DSA:1.20.1250.20 2 479 2.2E-110 T 15-10-2018 AM378_14205 ae7567315a918c6f45528ca51ec95927 483 SUPERFAMILY SSF103473 202 475 1.83E-9 T 15-10-2018 IPR036259 MFS transporter superfamily AM378_12770 fe962c1a71ac015be02689d3a8e943b3 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 180 192 1.0E-15 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM378_12770 fe962c1a71ac015be02689d3a8e943b3 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 150 164 1.0E-15 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM378_12770 fe962c1a71ac015be02689d3a8e943b3 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 164 180 1.0E-15 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM378_12770 fe962c1a71ac015be02689d3a8e943b3 210 Pfam PF00196 Bacterial regulatory proteins, luxR family 149 203 2.6E-23 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM378_12770 fe962c1a71ac015be02689d3a8e943b3 210 SMART SM00421 147 204 1.7E-25 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM378_12770 fe962c1a71ac015be02689d3a8e943b3 210 Gene3D G3DSA:3.40.50.12740 7 208 4.4E-66 T 15-10-2018 AM378_12770 fe962c1a71ac015be02689d3a8e943b3 210 ProSitePatterns PS00622 LuxR-type HTH domain signature. 164 191 - T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM378_12770 fe962c1a71ac015be02689d3a8e943b3 210 Pfam PF00072 Response regulator receiver domain 8 119 1.0E-29 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM378_12770 fe962c1a71ac015be02689d3a8e943b3 210 SMART SM00448 6 119 5.0E-34 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM378_12770 fe962c1a71ac015be02689d3a8e943b3 210 SUPERFAMILY SSF52172 5 137 3.27E-35 T 15-10-2018 IPR011006 CheY-like superfamily AM378_12770 fe962c1a71ac015be02689d3a8e943b3 210 SUPERFAMILY SSF46894 130 207 5.78E-23 T 15-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AM378_07190 4f8bb13cfd6e2d41e82959868e12bb26 244 Gene3D G3DSA:3.40.50.10490 78 242 2.8E-30 T 15-10-2018 AM378_07190 4f8bb13cfd6e2d41e82959868e12bb26 244 Gene3D G3DSA:1.10.10.10 3 72 2.4E-20 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_07190 4f8bb13cfd6e2d41e82959868e12bb26 244 SUPERFAMILY SSF53697 93 230 1.02E-29 T 15-10-2018 AM378_07190 4f8bb13cfd6e2d41e82959868e12bb26 244 Pfam PF01380 SIS domain 108 222 6.8E-16 T 15-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 AM378_07190 4f8bb13cfd6e2d41e82959868e12bb26 244 Pfam PF01418 Helix-turn-helix domain, rpiR family 9 72 3.9E-16 T 15-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 AM378_07190 4f8bb13cfd6e2d41e82959868e12bb26 244 SUPERFAMILY SSF46689 6 72 2.51E-20 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AM378_00310 59b04b60101266026d9eef48b51ceba4 563 Gene3D G3DSA:3.40.50.720 412 549 2.1E-29 T 15-10-2018 AM378_00310 59b04b60101266026d9eef48b51ceba4 563 SUPERFAMILY SSF51735 418 547 5.34E-27 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily AM378_00310 59b04b60101266026d9eef48b51ceba4 563 Pfam PF02254 TrkA-N domain 421 534 1.1E-22 T 15-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 AM378_00310 59b04b60101266026d9eef48b51ceba4 563 Pfam PF00999 Sodium/hydrogen exchanger family 13 384 1.4E-79 T 15-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 AM378_00310 59b04b60101266026d9eef48b51ceba4 563 Gene3D G3DSA:1.20.1530.20 6 397 4.6E-79 T 15-10-2018 IPR038770 Sodium/solute symporter superfamily AM378_00310 59b04b60101266026d9eef48b51ceba4 563 TIGRFAM TIGR00932 2a37: transporter, monovalent cation:proton antiporter-2 (CPA2) family 15 294 1.5E-79 T 15-10-2018 IPR004771 K+/H+ exchanger GO:0006812|GO:0008324|GO:0016021 AM378_00980 dcef6ad4530e6d5b5e77105bff6f78e0 246 Gene3D G3DSA:3.20.20.370 2 246 2.3E-101 T 15-10-2018 AM378_00980 dcef6ad4530e6d5b5e77105bff6f78e0 246 Pfam PF03746 LamB/YcsF family 3 234 9.7E-94 T 15-10-2018 IPR005501 UPF0271 family, LamB/YcsF/PxpA KEGG: 00480+3.5.2.9|MetaCyc: PWY-4041|MetaCyc: PWY-7942 AM378_00980 dcef6ad4530e6d5b5e77105bff6f78e0 246 SUPERFAMILY SSF88713 1 242 6.23E-93 T 15-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 AM378_00980 dcef6ad4530e6d5b5e77105bff6f78e0 246 Hamap MF_00691 UPF0271 protein YbgL [ybgL]. 1 240 43.506 T 15-10-2018 IPR005501 UPF0271 family, LamB/YcsF/PxpA KEGG: 00480+3.5.2.9|MetaCyc: PWY-4041|MetaCyc: PWY-7942 AM378_11295 18b19956aee704083845d869675be484 317 Pfam PF01497 Periplasmic binding protein 54 289 2.8E-26 T 15-10-2018 IPR002491 ABC transporter periplasmic binding domain AM378_11295 18b19956aee704083845d869675be484 317 Gene3D G3DSA:3.40.50.12260 184 289 8.4E-85 T 15-10-2018 AM378_11295 18b19956aee704083845d869675be484 317 SUPERFAMILY SSF53807 33 299 4.71E-58 T 15-10-2018 AM378_11295 18b19956aee704083845d869675be484 317 Gene3D G3DSA:3.40.50.1980 45 305 8.4E-85 T 15-10-2018 AM378_18625 fc0ded7a8e5261e6d46ce36fa4c32d47 465 PIRSF PIRSF000350 1 462 2.6E-70 T 15-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 AM378_18625 fc0ded7a8e5261e6d46ce36fa4c32d47 465 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 8 325 1.1E-58 T 15-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM378_18625 fc0ded7a8e5261e6d46ce36fa4c32d47 465 SUPERFAMILY SSF51905 1 321 4.54E-57 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AM378_18625 fc0ded7a8e5261e6d46ce36fa4c32d47 465 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 141 150 4.3E-51 T 15-10-2018 AM378_18625 fc0ded7a8e5261e6d46ce36fa4c32d47 465 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 177 202 4.3E-51 T 15-10-2018 AM378_18625 fc0ded7a8e5261e6d46ce36fa4c32d47 465 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 305 312 4.3E-51 T 15-10-2018 AM378_18625 fc0ded7a8e5261e6d46ce36fa4c32d47 465 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 8 30 4.3E-51 T 15-10-2018 AM378_18625 fc0ded7a8e5261e6d46ce36fa4c32d47 465 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 406 421 4.3E-51 T 15-10-2018 AM378_18625 fc0ded7a8e5261e6d46ce36fa4c32d47 465 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 431 451 4.3E-51 T 15-10-2018 AM378_18625 fc0ded7a8e5261e6d46ce36fa4c32d47 465 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 41 56 4.3E-51 T 15-10-2018 AM378_18625 fc0ded7a8e5261e6d46ce36fa4c32d47 465 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 262 276 4.3E-51 T 15-10-2018 AM378_18625 fc0ded7a8e5261e6d46ce36fa4c32d47 465 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 341 362 4.3E-51 T 15-10-2018 AM378_18625 fc0ded7a8e5261e6d46ce36fa4c32d47 465 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 5.9E-26 T 15-10-2018 AM378_18625 fc0ded7a8e5261e6d46ce36fa4c32d47 465 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 138 156 5.9E-26 T 15-10-2018 AM378_18625 fc0ded7a8e5261e6d46ce36fa4c32d47 465 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 261 277 5.9E-26 T 15-10-2018 AM378_18625 fc0ded7a8e5261e6d46ce36fa4c32d47 465 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 290 312 5.9E-26 T 15-10-2018 AM378_18625 fc0ded7a8e5261e6d46ce36fa4c32d47 465 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 177 195 5.9E-26 T 15-10-2018 AM378_18625 fc0ded7a8e5261e6d46ce36fa4c32d47 465 Gene3D G3DSA:3.30.390.30 344 463 9.3E-32 T 15-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 AM378_18625 fc0ded7a8e5261e6d46ce36fa4c32d47 465 Gene3D G3DSA:3.50.50.60 7 332 1.0E-94 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AM378_18625 fc0ded7a8e5261e6d46ce36fa4c32d47 465 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 345 456 2.4E-29 T 15-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 AM378_18625 fc0ded7a8e5261e6d46ce36fa4c32d47 465 Gene3D G3DSA:3.50.50.60 157 275 1.0E-94 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AM378_18625 fc0ded7a8e5261e6d46ce36fa4c32d47 465 SUPERFAMILY SSF55424 344 462 1.03E-29 T 15-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 AM378_18625 fc0ded7a8e5261e6d46ce36fa4c32d47 465 Hamap MF_00247 Soluble pyridine nucleotide transhydrogenase [sthA]. 2 465 66.979 T 15-10-2018 IPR022962 Soluble pyridine nucleotide transhydrogenase GO:0003957|GO:0055114 KEGG: 00760+1.6.1.1|MetaCyc: PWY-5083 AM378_07520 6fe00f9018bb3068a59b81fd9eaa3ba8 174 Gene3D G3DSA:1.10.10.10 86 169 1.0E-37 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_07520 6fe00f9018bb3068a59b81fd9eaa3ba8 174 Pfam PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain 10 82 1.0E-10 T 15-10-2018 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 Reactome: R-HSA-5657655 AM378_07520 6fe00f9018bb3068a59b81fd9eaa3ba8 174 SUPERFAMILY SSF53155 9 91 9.81E-7 T 15-10-2018 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily GO:0003908|GO:0006281 Reactome: R-HSA-5657655 AM378_07520 6fe00f9018bb3068a59b81fd9eaa3ba8 174 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 87 166 3.6E-38 T 15-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 AM378_07520 6fe00f9018bb3068a59b81fd9eaa3ba8 174 SUPERFAMILY SSF46767 86 168 3.01E-34 T 15-10-2018 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain Reactome: R-HSA-5657655 AM378_07520 6fe00f9018bb3068a59b81fd9eaa3ba8 174 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 88 167 3.1E-35 T 15-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 AM378_07520 6fe00f9018bb3068a59b81fd9eaa3ba8 174 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 137 143 - T 15-10-2018 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 Reactome: R-HSA-5657655 AM378_07520 6fe00f9018bb3068a59b81fd9eaa3ba8 174 Hamap MF_00772 Methylated-DNA--protein-cysteine methyltransferase [ogt]. 21 167 39.162 T 15-10-2018 IPR023546 Methylated-DNA--protein-cysteine methyltransferase GO:0003824|GO:0006281 AM378_22765 23bcabf8bb8b7adbb294a729a59926c2 315 Gene3D G3DSA:3.40.190.10 105 307 5.0E-36 T 15-10-2018 AM378_22765 23bcabf8bb8b7adbb294a729a59926c2 315 Gene3D G3DSA:3.40.190.10 186 283 5.0E-36 T 15-10-2018 AM378_22765 23bcabf8bb8b7adbb294a729a59926c2 315 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 5.1E-8 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_22765 23bcabf8bb8b7adbb294a729a59926c2 315 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 50 60 5.1E-8 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_22765 23bcabf8bb8b7adbb294a729a59926c2 315 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 60 71 5.1E-8 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_22765 23bcabf8bb8b7adbb294a729a59926c2 315 Gene3D G3DSA:1.10.10.10 15 103 1.9E-30 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_22765 23bcabf8bb8b7adbb294a729a59926c2 315 SUPERFAMILY SSF46785 19 98 6.35E-20 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM378_22765 23bcabf8bb8b7adbb294a729a59926c2 315 SUPERFAMILY SSF53850 105 310 4.71E-35 T 15-10-2018 AM378_22765 23bcabf8bb8b7adbb294a729a59926c2 315 Pfam PF03466 LysR substrate binding domain 130 310 3.5E-17 T 15-10-2018 IPR005119 LysR, substrate-binding AM378_22765 23bcabf8bb8b7adbb294a729a59926c2 315 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 24 82 3.1E-17 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_12130 439cd72363d07b0421d13a8bff45643c 361 TIGRFAM TIGR00033 aroC: chorismate synthase 10 350 1.8E-141 T 15-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 AM378_12130 439cd72363d07b0421d13a8bff45643c 361 Pfam PF01264 Chorismate synthase 10 345 1.1E-144 T 15-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 AM378_12130 439cd72363d07b0421d13a8bff45643c 361 PIRSF PIRSF001456 3 360 9.4E-145 T 15-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 AM378_12130 439cd72363d07b0421d13a8bff45643c 361 ProSitePatterns PS00788 Chorismate synthase signature 2. 124 140 - T 15-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 AM378_12130 439cd72363d07b0421d13a8bff45643c 361 Hamap MF_00300 Chorismate synthase [aroC]. 10 352 38.52 T 15-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 AM378_12130 439cd72363d07b0421d13a8bff45643c 361 ProSitePatterns PS00789 Chorismate synthase signature 3. 319 335 - T 15-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 AM378_12130 439cd72363d07b0421d13a8bff45643c 361 ProSitePatterns PS00787 Chorismate synthase signature 1. 16 31 - T 15-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 AM378_12130 439cd72363d07b0421d13a8bff45643c 361 Gene3D G3DSA:3.60.150.10 1 360 5.1E-161 T 15-10-2018 IPR035904 Chorismate synthase AroC superfamily KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 AM378_12130 439cd72363d07b0421d13a8bff45643c 361 SUPERFAMILY SSF103263 4 351 6.41E-150 T 15-10-2018 IPR035904 Chorismate synthase AroC superfamily KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 AM378_15700 e7a452253ac9f52589f93ad016c0c0e1 847 Gene3D G3DSA:2.60.40.3110 274 362 1.2E-30 T 15-10-2018 AM378_15700 e7a452253ac9f52589f93ad016c0c0e1 847 SUPERFAMILY SSF141729 35 156 4.19E-32 T 15-10-2018 IPR037224 PapC, N-terminal domain superfamily GO:0005515 AM378_15700 e7a452253ac9f52589f93ad016c0c0e1 847 Pfam PF13954 PapC N-terminal domain 37 181 3.9E-39 T 15-10-2018 IPR025885 PapC, N-terminal domain GO:0005515 AM378_15700 e7a452253ac9f52589f93ad016c0c0e1 847 Gene3D G3DSA:3.10.20.410 35 158 7.9E-22 T 15-10-2018 AM378_15700 e7a452253ac9f52589f93ad016c0c0e1 847 Gene3D G3DSA:2.60.40.2610 663 754 7.5E-11 T 15-10-2018 AM378_15700 e7a452253ac9f52589f93ad016c0c0e1 847 Gene3D G3DSA:2.60.40.2070 758 836 1.5E-27 T 15-10-2018 AM378_15700 e7a452253ac9f52589f93ad016c0c0e1 847 Pfam PF13953 PapC C-terminal domain 760 816 3.3E-15 T 15-10-2018 IPR025949 PapC-like, C-terminal domain AM378_15700 e7a452253ac9f52589f93ad016c0c0e1 847 ProSitePatterns PS01151 Fimbrial biogenesis outer membrane usher protein signature. 316 326 - T 15-10-2018 IPR018030 Fimbrial membrane usher, conserved site AM378_15700 e7a452253ac9f52589f93ad016c0c0e1 847 Pfam PF00577 Outer membrane usher protein 199 749 8.2E-187 T 15-10-2018 IPR000015 Outer membrane usher protein GO:0009297|GO:0015473|GO:0016020 AM378_19835 cda68cbde0c73e629b880ea411e515db 564 Pfam PF00884 Sulfatase 250 538 3.1E-44 T 15-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 AM378_19835 cda68cbde0c73e629b880ea411e515db 564 SUPERFAMILY SSF53649 250 543 8.04E-20 T 15-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 AM378_19835 cda68cbde0c73e629b880ea411e515db 564 Pfam PF08019 Domain of unknown function (DUF1705) 56 173 1.1E-18 T 15-10-2018 IPR012549 Phosphoethanolamine transferase, N-terminal GO:0016021 AM378_19835 cda68cbde0c73e629b880ea411e515db 564 Gene3D G3DSA:3.40.720.10 243 550 9.2E-61 T 15-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 AM378_12720 bb19997adb235142ec3228dee9774a7f 133 SUPERFAMILY SSF55166 6 126 1.54E-25 T 15-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 AM378_12720 bb19997adb235142ec3228dee9774a7f 133 Pfam PF13539 D-alanyl-D-alanine carboxypeptidase 60 126 1.0E-15 T 15-10-2018 IPR039561 Peptidase M15C GO:0008233 AM378_12720 bb19997adb235142ec3228dee9774a7f 133 Gene3D G3DSA:3.30.1380.10 7 126 1.6E-19 T 15-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 AM378_12330 d9e09ddb03ca6e38f8f93e0bce93869e 409 Gene3D G3DSA:3.90.1150.10 294 392 8.9E-134 T 15-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AM378_12330 d9e09ddb03ca6e38f8f93e0bce93869e 409 SUPERFAMILY SSF53383 9 394 1.26E-106 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM378_12330 d9e09ddb03ca6e38f8f93e0bce93869e 409 Pfam PF00155 Aminotransferase class I and II 37 387 8.0E-58 T 15-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AM378_12330 d9e09ddb03ca6e38f8f93e0bce93869e 409 Gene3D G3DSA:3.40.640.10 70 293 8.9E-134 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AM378_16475 2d6bf75f682276429f25b43c28353325 287 Gene3D G3DSA:3.40.1010.10 1 120 1.4E-47 T 15-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 AM378_16475 2d6bf75f682276429f25b43c28353325 287 ProSitePatterns PS01296 RsmI AdoMet-dependent methyltransferase protein family signature. 91 102 - T 15-10-2018 IPR018063 SAM-dependent methyltransferase RsmI, conserved site GO:0008168 AM378_16475 2d6bf75f682276429f25b43c28353325 287 Hamap MF_01877 Ribosomal RNA small subunit methyltransferase I [rsmI]. 13 234 37.886 T 15-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 AM378_16475 2d6bf75f682276429f25b43c28353325 287 SUPERFAMILY SSF53790 13 232 2.36E-82 T 15-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 AM378_16475 2d6bf75f682276429f25b43c28353325 287 PIRSF PIRSF005917 1 287 1.3E-107 T 15-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 AM378_16475 2d6bf75f682276429f25b43c28353325 287 TIGRFAM TIGR00096 TIGR00096: 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 14 283 2.7E-110 T 15-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 AM378_16475 2d6bf75f682276429f25b43c28353325 287 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 13 213 1.4E-26 T 15-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 AM378_16475 2d6bf75f682276429f25b43c28353325 287 Gene3D G3DSA:3.30.950.10 121 241 2.2E-41 T 15-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 AM378_22160 84ae58a6ef636ae616a6b36bb03f46ea 298 Pfam PF02311 AraC-like ligand binding domain 40 113 9.4E-7 T 15-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 AM378_22160 84ae58a6ef636ae616a6b36bb03f46ea 298 SUPERFAMILY SSF46689 246 293 5.82E-10 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AM378_22160 84ae58a6ef636ae616a6b36bb03f46ea 298 Gene3D G3DSA:2.60.120.10 34 107 2.7E-7 T 15-10-2018 IPR014710 RmlC-like jelly roll fold AM378_22160 84ae58a6ef636ae616a6b36bb03f46ea 298 Gene3D G3DSA:1.10.10.60 190 297 3.5E-22 T 15-10-2018 AM378_22160 84ae58a6ef636ae616a6b36bb03f46ea 298 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 260 275 8.2E-5 T 15-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM378_22160 84ae58a6ef636ae616a6b36bb03f46ea 298 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 275 291 8.2E-5 T 15-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM378_22160 84ae58a6ef636ae616a6b36bb03f46ea 298 SUPERFAMILY SSF51182 38 107 7.56E-10 T 15-10-2018 IPR011051 RmlC-like cupin domain superfamily AM378_22160 84ae58a6ef636ae616a6b36bb03f46ea 298 TIGRFAM TIGR02297 HpaA: 4-hydroxyphenylacetate catabolism regulatory protein HpaA 8 292 2.3E-123 T 15-10-2018 IPR011983 4-hydroxyphenylacetate catabolism regulatory protein HpaA AM378_22160 84ae58a6ef636ae616a6b36bb03f46ea 298 Pfam PF12833 Helix-turn-helix domain 214 292 3.6E-19 T 15-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM378_22160 84ae58a6ef636ae616a6b36bb03f46ea 298 SMART SM00342 208 291 1.0E-21 T 15-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM378_10375 5eb53adaac06b295ea100a6c5084a7ba 312 TIGRFAM TIGR02277 PaaX_trns_reg: phenylacetic acid degradation operon negative regulatory protein PaaX 22 304 3.5E-100 T 15-10-2018 IPR011965 Phenylacetic acid degradation operon negative regulatory protein PaaX GO:0006351 AM378_10375 5eb53adaac06b295ea100a6c5084a7ba 312 Pfam PF08223 PaaX-like protein C-terminal domain 184 282 3.1E-29 T 15-10-2018 IPR013225 PaaX-like, C-terminal AM378_10375 5eb53adaac06b295ea100a6c5084a7ba 312 PIRSF PIRSF020623 1 307 3.8E-112 T 15-10-2018 IPR011965 Phenylacetic acid degradation operon negative regulatory protein PaaX GO:0006351 AM378_10375 5eb53adaac06b295ea100a6c5084a7ba 312 Pfam PF07848 PaaX-like protein 20 88 5.1E-27 T 15-10-2018 IPR012906 PaaX-like, N-terminal AM378_10375 5eb53adaac06b295ea100a6c5084a7ba 312 Gene3D G3DSA:1.10.10.10 19 100 1.2E-27 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_22150 4dd5de2f9c8d38058d471d8d04ab9428 264 SUPERFAMILY SSF51621 1 252 1.79E-86 T 15-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 AM378_22150 4dd5de2f9c8d38058d471d8d04ab9428 264 TIGRFAM TIGR02311 HpaI: 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase 4 252 1.7E-133 T 15-10-2018 IPR012689 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase GO:0010124|GO:0018802 KEGG: 00350+4.1.2.52 AM378_22150 4dd5de2f9c8d38058d471d8d04ab9428 264 Gene3D G3DSA:3.20.20.60 1 261 8.6E-97 T 15-10-2018 AM378_22150 4dd5de2f9c8d38058d471d8d04ab9428 264 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 16 242 2.7E-66 T 15-10-2018 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 AM378_02850 55d0c16593ecd6c9a1c6cd39b75c2e39 405 SUPERFAMILY SSF52540 38 235 2.88E-45 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_02850 55d0c16593ecd6c9a1c6cd39b75c2e39 405 SMART SM00382 52 232 2.8E-12 T 15-10-2018 IPR003593 AAA+ ATPase domain AM378_02850 55d0c16593ecd6c9a1c6cd39b75c2e39 405 Gene3D G3DSA:3.40.50.300 28 275 1.4E-45 T 15-10-2018 AM378_02850 55d0c16593ecd6c9a1c6cd39b75c2e39 405 Pfam PF00005 ABC transporter 43 174 1.1E-20 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM378_02850 55d0c16593ecd6c9a1c6cd39b75c2e39 405 Pfam PF14524 Wzt C-terminal domain 259 395 7.8E-16 T 15-10-2018 IPR029439 Wzt, C-terminal AM378_02850 55d0c16593ecd6c9a1c6cd39b75c2e39 405 ProSitePatterns PS00211 ABC transporters family signature. 148 162 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM378_06715 bc2546421bf5098d05a688275bb9c862 151 Pfam PF07977 FabA-like domain 17 144 2.5E-20 T 15-10-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 AM378_06715 bc2546421bf5098d05a688275bb9c862 151 Gene3D G3DSA:3.10.129.10 6 151 2.9E-40 T 15-10-2018 AM378_06715 bc2546421bf5098d05a688275bb9c862 151 SUPERFAMILY SSF54637 6 150 2.16E-31 T 15-10-2018 IPR029069 HotDog domain superfamily AM378_12090 b180781d369ebec099effd521bc1ae11 343 Pfam PF02424 ApbE family 37 320 1.9E-79 T 15-10-2018 IPR024932 Flavin transferase ApbE GO:0017013 AM378_12090 b180781d369ebec099effd521bc1ae11 343 PIRSF PIRSF006268 2 343 3.3E-87 T 15-10-2018 IPR024932 Flavin transferase ApbE GO:0017013 AM378_12090 b180781d369ebec099effd521bc1ae11 343 Gene3D G3DSA:3.10.520.20 19 343 2.0E-115 T 15-10-2018 AM378_12090 b180781d369ebec099effd521bc1ae11 343 SUPERFAMILY SSF143631 32 341 1.33E-93 T 15-10-2018 IPR003374 ApbE-like superfamily AM378_10215 f6020773ae8e33ac92f0a9a96ea1c5ff 291 Pfam PF03466 LysR substrate binding domain 91 288 2.9E-34 T 15-10-2018 IPR005119 LysR, substrate-binding AM378_10215 f6020773ae8e33ac92f0a9a96ea1c5ff 291 Gene3D G3DSA:3.40.190.10 163 258 5.4E-46 T 15-10-2018 AM378_10215 f6020773ae8e33ac92f0a9a96ea1c5ff 291 Gene3D G3DSA:3.40.190.10 103 284 5.4E-46 T 15-10-2018 AM378_10215 f6020773ae8e33ac92f0a9a96ea1c5ff 291 SUPERFAMILY SSF53850 93 289 2.17E-34 T 15-10-2018 AM378_10215 f6020773ae8e33ac92f0a9a96ea1c5ff 291 Gene3D G3DSA:1.10.10.10 6 97 1.2E-19 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_10215 f6020773ae8e33ac92f0a9a96ea1c5ff 291 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 67 4.3E-15 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_10215 f6020773ae8e33ac92f0a9a96ea1c5ff 291 SUPERFAMILY SSF46785 5 113 2.97E-19 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM378_02130 d12e45fb577c517918f85d8ddc958910 302 Pfam PF00892 EamA-like transporter family 12 139 1.6E-13 T 15-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AM378_02130 d12e45fb577c517918f85d8ddc958910 302 Pfam PF00892 EamA-like transporter family 154 283 2.8E-16 T 15-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AM378_02130 d12e45fb577c517918f85d8ddc958910 302 SUPERFAMILY SSF103481 39 143 2.09E-16 T 15-10-2018 AM378_02130 d12e45fb577c517918f85d8ddc958910 302 SUPERFAMILY SSF103481 188 287 7.32E-15 T 15-10-2018 AM378_01880 18a0e2225e4aa0f9d558f6c18a346af9 855 Pfam PF13402 Peptidase M60, enhancin and enhancin-like 113 345 1.4E-14 T 15-10-2018 IPR031161 Peptidase family M60 domain AM378_01880 18a0e2225e4aa0f9d558f6c18a346af9 855 Pfam PF03272 Putative mucin or carbohydrate-binding module 735 850 1.1E-26 T 15-10-2018 IPR004954 Putative mucin/carbohydrate-binding domain AM378_01880 18a0e2225e4aa0f9d558f6c18a346af9 855 Pfam PF03272 Putative mucin or carbohydrate-binding module 538 650 3.5E-29 T 15-10-2018 IPR004954 Putative mucin/carbohydrate-binding domain AM378_01880 18a0e2225e4aa0f9d558f6c18a346af9 855 SMART SM01276 30 332 4.9E-39 T 15-10-2018 IPR031161 Peptidase family M60 domain AM378_01880 18a0e2225e4aa0f9d558f6c18a346af9 855 Gene3D G3DSA:1.10.1740.210 130 250 6.3E-5 T 15-10-2018 AM378_11375 e2cec2f2cb25800ea96cae1667b9d715 391 SUPERFAMILY SSF103473 16 389 3.66E-49 T 15-10-2018 IPR036259 MFS transporter superfamily AM378_11375 e2cec2f2cb25800ea96cae1667b9d715 391 Gene3D G3DSA:1.20.1250.20 212 391 1.1E-18 T 15-10-2018 AM378_11375 e2cec2f2cb25800ea96cae1667b9d715 391 Gene3D G3DSA:1.20.1250.20 15 205 8.3E-20 T 15-10-2018 AM378_11375 e2cec2f2cb25800ea96cae1667b9d715 391 TIGRFAM TIGR00899 2A0120: sugar efflux transporter 18 389 5.4E-168 T 15-10-2018 IPR004750 Sugar efflux GO:0005351|GO:0008643|GO:0016021 AM378_11375 e2cec2f2cb25800ea96cae1667b9d715 391 Pfam PF07690 Major Facilitator Superfamily 20 354 3.6E-32 T 15-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM378_17640 17186c47bb9fbddf92ba1a4d1138ef18 637 Pfam PF16326 ABC transporter C-terminal domain 562 623 2.1E-8 T 15-10-2018 IPR032524 ABC transporter Uup, C-terminal GO:0003677 AM378_17640 17186c47bb9fbddf92ba1a4d1138ef18 637 Gene3D G3DSA:3.40.50.300 7 274 8.6E-60 T 15-10-2018 AM378_17640 17186c47bb9fbddf92ba1a4d1138ef18 637 ProSitePatterns PS00211 ABC transporters family signature. 431 445 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM378_17640 17186c47bb9fbddf92ba1a4d1138ef18 637 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM378_17640 17186c47bb9fbddf92ba1a4d1138ef18 637 SUPERFAMILY SSF52540 294 510 1.05E-46 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_17640 17186c47bb9fbddf92ba1a4d1138ef18 637 SMART SM00382 26 223 1.2E-14 T 15-10-2018 IPR003593 AAA+ ATPase domain AM378_17640 17186c47bb9fbddf92ba1a4d1138ef18 637 SMART SM00382 337 506 3.3E-13 T 15-10-2018 IPR003593 AAA+ ATPase domain AM378_17640 17186c47bb9fbddf92ba1a4d1138ef18 637 Gene3D G3DSA:3.40.50.300 276 541 1.0E-55 T 15-10-2018 AM378_17640 17186c47bb9fbddf92ba1a4d1138ef18 637 SUPERFAMILY SSF52540 2 256 1.43E-46 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_17640 17186c47bb9fbddf92ba1a4d1138ef18 637 Pfam PF00005 ABC transporter 328 459 1.8E-24 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM378_17640 17186c47bb9fbddf92ba1a4d1138ef18 637 Pfam PF12848 ABC transporter 217 296 2.3E-28 T 15-10-2018 IPR032781 ABC-transporter extension domain AM378_17640 17186c47bb9fbddf92ba1a4d1138ef18 637 Pfam PF00005 ABC transporter 17 178 1.9E-22 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM378_11860 08d5c89a754e828ce5680817d74cfedc 317 SMART SM00861 13 179 2.8E-23 T 15-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain AM378_11860 08d5c89a754e828ce5680817d74cfedc 317 SUPERFAMILY SSF52518 9 174 8.03E-34 T 15-10-2018 IPR029061 Thiamin diphosphate-binding fold AM378_11860 08d5c89a754e828ce5680817d74cfedc 317 Gene3D G3DSA:3.40.50.920 189 317 3.1E-43 T 15-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 AM378_11860 08d5c89a754e828ce5680817d74cfedc 317 Gene3D G3DSA:3.40.50.970 4 188 2.9E-38 T 15-10-2018 AM378_11860 08d5c89a754e828ce5680817d74cfedc 317 Pfam PF02779 Transketolase, pyrimidine binding domain 12 164 8.0E-21 T 15-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain AM378_11860 08d5c89a754e828ce5680817d74cfedc 317 Pfam PF02780 Transketolase, C-terminal domain 189 309 3.3E-34 T 15-10-2018 IPR033248 Transketolase, C-terminal domain AM378_11860 08d5c89a754e828ce5680817d74cfedc 317 SUPERFAMILY SSF52922 185 316 3.14E-37 T 15-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 AM378_03065 4e7f218ff1a1661b210662445f601d6b 432 Pfam PF03222 Tryptophan/tyrosine permease family 32 396 2.8E-11 T 15-10-2018 IPR018227 Amino acid/polyamine transporter 2 GO:0003333 AM378_03065 4e7f218ff1a1661b210662445f601d6b 432 TIGRFAM TIGR00814 stp: serine transporter 20 421 5.4E-180 T 15-10-2018 IPR004694 Hydroxy amino acid transporter GO:0006865|GO:0015171|GO:0016021 AM378_23565 43df505fa334f48171a776b258e5c7b7 264 SMART SM00900 149 247 2.5E-33 T 15-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 AM378_23565 43df505fa334f48171a776b258e5c7b7 264 Hamap MF_00427 Na(+)-translocating NADH-quinone reductase subunit C [nqrC]. 8 259 36.695 T 15-10-2018 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0010181|GO:0016021|GO:0016655 AM378_23565 43df505fa334f48171a776b258e5c7b7 264 TIGRFAM TIGR01938 nqrC: NADH:ubiquinone oxidoreductase, Na(+)-translocating, C subunit 8 255 2.3E-95 T 15-10-2018 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0010181|GO:0016021|GO:0016655 AM378_23565 43df505fa334f48171a776b258e5c7b7 264 PIRSF PIRSF009437 1 262 1.3E-103 T 15-10-2018 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0010181|GO:0016021|GO:0016655 AM378_23565 43df505fa334f48171a776b258e5c7b7 264 Pfam PF04205 FMN-binding domain 149 244 1.2E-15 T 15-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 AM378_02370 69defef4fbe6a787f7a5f2a885ec65a2 219 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 17 143 3.9E-5 T 15-10-2018 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 AM378_02370 69defef4fbe6a787f7a5f2a885ec65a2 219 Gene3D G3DSA:2.60.40.10 17 128 3.9E-6 T 15-10-2018 IPR013783 Immunoglobulin-like fold AM378_02370 69defef4fbe6a787f7a5f2a885ec65a2 219 SUPERFAMILY SSF49354 12 114 1.13E-8 T 15-10-2018 IPR008962 PapD-like superfamily AM378_00630 cc200e73da327289048ac965d343070f 198 Gene3D G3DSA:1.10.357.10 13 197 9.1E-26 T 15-10-2018 AM378_00630 cc200e73da327289048ac965d343070f 198 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 19 32 3.3E-6 T 15-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM378_00630 cc200e73da327289048ac965d343070f 198 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 40 63 3.3E-6 T 15-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM378_00630 cc200e73da327289048ac965d343070f 198 Pfam PF13977 BetI-type transcriptional repressor, C-terminal 94 195 9.9E-9 T 15-10-2018 IPR039538 BetI-type transcriptional repressor, C-terminal AM378_00630 cc200e73da327289048ac965d343070f 198 Pfam PF00440 Bacterial regulatory proteins, tetR family 19 65 6.0E-14 T 15-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM378_00630 cc200e73da327289048ac965d343070f 198 SUPERFAMILY SSF46689 8 80 1.3E-17 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AM378_00630 cc200e73da327289048ac965d343070f 198 ProSitePatterns PS01081 TetR-type HTH domain signature. 31 62 - T 15-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site AM378_04970 b7d7d98c2c451bd8a2fdc3205a4ab51f 223 Pfam PF00072 Response regulator receiver domain 3 112 1.7E-25 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM378_04970 b7d7d98c2c451bd8a2fdc3205a4ab51f 223 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 220 6.4E-20 T 15-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AM378_04970 b7d7d98c2c451bd8a2fdc3205a4ab51f 223 SMART SM00862 145 220 4.3E-20 T 15-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AM378_04970 b7d7d98c2c451bd8a2fdc3205a4ab51f 223 Gene3D G3DSA:3.40.50.2300 1 121 2.3E-39 T 15-10-2018 AM378_04970 b7d7d98c2c451bd8a2fdc3205a4ab51f 223 SUPERFAMILY SSF52172 1 173 2.42E-38 T 15-10-2018 IPR011006 CheY-like superfamily AM378_04970 b7d7d98c2c451bd8a2fdc3205a4ab51f 223 SMART SM00448 1 112 3.3E-38 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM378_04970 b7d7d98c2c451bd8a2fdc3205a4ab51f 223 Gene3D G3DSA:1.10.10.10 123 223 5.3E-26 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_13090 8cdc42f977c635e6d0b914f5e8d339a6 475 Gene3D G3DSA:1.20.1250.20 261 460 4.2E-15 T 15-10-2018 AM378_13090 8cdc42f977c635e6d0b914f5e8d339a6 475 Gene3D G3DSA:1.20.1720.10 12 254 2.1E-43 T 15-10-2018 AM378_13090 8cdc42f977c635e6d0b914f5e8d339a6 475 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 16 424 7.3E-70 T 15-10-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0016021|GO:0022857|GO:0055085 AM378_13090 8cdc42f977c635e6d0b914f5e8d339a6 475 Hamap MF_01577 Putative multidrug resistance protein MdtD [mdtD]. 1 465 43.297 T 15-10-2018 IPR023721 Multidrug resistance protein MdtD, putative AM378_13090 8cdc42f977c635e6d0b914f5e8d339a6 475 SUPERFAMILY SSF103473 8 450 2.35E-58 T 15-10-2018 IPR036259 MFS transporter superfamily AM378_13090 8cdc42f977c635e6d0b914f5e8d339a6 475 Pfam PF07690 Major Facilitator Superfamily 15 405 2.3E-47 T 15-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM378_13090 8cdc42f977c635e6d0b914f5e8d339a6 475 PRINTS PR01036 Tetracycline resistance protein TetB signature 199 217 3.7E-9 T 15-10-2018 AM378_13090 8cdc42f977c635e6d0b914f5e8d339a6 475 PRINTS PR01036 Tetracycline resistance protein TetB signature 396 415 3.7E-9 T 15-10-2018 AM378_13090 8cdc42f977c635e6d0b914f5e8d339a6 475 PRINTS PR01036 Tetracycline resistance protein TetB signature 105 125 3.7E-9 T 15-10-2018 AM378_13090 8cdc42f977c635e6d0b914f5e8d339a6 475 PRINTS PR01036 Tetracycline resistance protein TetB signature 14 38 3.7E-9 T 15-10-2018 AM378_13090 8cdc42f977c635e6d0b914f5e8d339a6 475 PRINTS PR01036 Tetracycline resistance protein TetB signature 135 159 3.7E-9 T 15-10-2018 AM378_13090 8cdc42f977c635e6d0b914f5e8d339a6 475 PRINTS PR01036 Tetracycline resistance protein TetB signature 160 184 3.7E-9 T 15-10-2018 AM378_11800 83a86e1db3a5a02f61cf23d24ad2763d 145 Gene3D G3DSA:1.20.58.1610 1 124 3.4E-43 T 15-10-2018 IPR038430 NADH:ubiquinone oxidoreductase, subunit 3 superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM378_11800 83a86e1db3a5a02f61cf23d24ad2763d 145 Pfam PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 27 123 1.1E-31 T 15-10-2018 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM378_11800 83a86e1db3a5a02f61cf23d24ad2763d 145 Hamap MF_01394 NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic [ndhC]. 7 124 20.178 T 15-10-2018 IPR023043 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid GO:0016651|GO:0055114 AM378_00205 6325b25107f7a47674a294f390e3f838 46 ProDom PD002101 RIBOSOMAL L36 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID B SUBUNIT DIRECT SEQUENCING 17 41 0.003 T 15-10-2018 AM378_00205 6325b25107f7a47674a294f390e3f838 46 Pfam PF00444 Ribosomal protein L36 1 41 3.7E-17 T 15-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM378_00205 6325b25107f7a47674a294f390e3f838 46 ProSitePatterns PS00828 Ribosomal protein L36 signature. 14 40 - T 15-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM378_00205 6325b25107f7a47674a294f390e3f838 46 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 41 17.111 T 15-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM378_00205 6325b25107f7a47674a294f390e3f838 46 SUPERFAMILY SSF57840 8 41 8.89E-14 T 15-10-2018 IPR035977 Ribosomal protein L36 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM378_00205 6325b25107f7a47674a294f390e3f838 46 TIGRFAM TIGR01022 rpmJ_bact: ribosomal protein bL36 9 41 3.6E-9 T 15-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM378_14030 41e0b50efae1056474dc8d158c2f0ec3 333 SUPERFAMILY SSF53850 25 327 2.58E-93 T 15-10-2018 AM378_14030 41e0b50efae1056474dc8d158c2f0ec3 333 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 34 314 4.1E-55 T 15-10-2018 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0022857|GO:0043190|GO:0055085 AM378_14030 41e0b50efae1056474dc8d158c2f0ec3 333 Gene3D G3DSA:3.40.190.10 26 327 1.3E-142 T 15-10-2018 AM378_14030 41e0b50efae1056474dc8d158c2f0ec3 333 Gene3D G3DSA:3.40.190.100 114 255 1.3E-142 T 15-10-2018 AM378_11815 9302acea2d4888c32d3103447641d41d 199 ProDom PD353566 UPF0207 HYDROLASE HD PHOSPHOHYDROLASE METAL-DEPENDENT SUBDOMAIN YFBR PHOSPHOHYDROLASE NUCLEOTIDE-BINDING NUCLEOSIDE 80 176 1.0E-40 T 15-10-2018 AM378_11815 9302acea2d4888c32d3103447641d41d 199 Hamap MF_01100 5'-deoxynucleotidase YfbR [yfbR]. 3 195 45.926 T 15-10-2018 IPR022971 5'-deoxynucleotidase YfbR KEGG: 00240+3.1.3.89 AM378_11815 9302acea2d4888c32d3103447641d41d 199 SUPERFAMILY SSF109604 3 185 4.71E-46 T 15-10-2018 AM378_11815 9302acea2d4888c32d3103447641d41d 199 Pfam PF13023 HD domain 11 161 5.3E-18 T 15-10-2018 IPR006674 HD domain AM378_11815 9302acea2d4888c32d3103447641d41d 199 SMART SM00471 26 151 1.8E-7 T 15-10-2018 IPR003607 HD/PDEase domain AM378_11815 9302acea2d4888c32d3103447641d41d 199 Gene3D G3DSA:1.10.3210.10 1 199 9.7E-89 T 15-10-2018 AM378_15030 be01c6693ae1b1618a7c3f3a74811d50 400 Gene3D G3DSA:3.50.50.60 1 241 1.0E-81 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AM378_15030 be01c6693ae1b1618a7c3f3a74811d50 400 Gene3D G3DSA:3.50.50.60 257 400 1.4E-49 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AM378_15030 be01c6693ae1b1618a7c3f3a74811d50 400 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 5 391 1.7E-136 T 15-10-2018 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 AM378_15030 be01c6693ae1b1618a7c3f3a74811d50 400 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 5 27 2.2E-19 T 15-10-2018 AM378_15030 be01c6693ae1b1618a7c3f3a74811d50 400 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 156 171 2.2E-19 T 15-10-2018 AM378_15030 be01c6693ae1b1618a7c3f3a74811d50 400 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 281 296 2.2E-19 T 15-10-2018 AM378_15030 be01c6693ae1b1618a7c3f3a74811d50 400 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 296 312 2.2E-19 T 15-10-2018 AM378_15030 be01c6693ae1b1618a7c3f3a74811d50 400 Pfam PF01494 FAD binding domain 4 343 7.4E-31 T 15-10-2018 IPR002938 FAD-binding domain GO:0071949 AM378_15030 be01c6693ae1b1618a7c3f3a74811d50 400 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 295 308 - T 15-10-2018 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 Reactome: R-HSA-2142789 AM378_15030 be01c6693ae1b1618a7c3f3a74811d50 400 SUPERFAMILY SSF51905 4 385 1.3E-61 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AM378_20295 89a52098e006016f368d7c10acfcdec7 206 TIGRFAM TIGR00095 TIGR00095: 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 14 197 1.5E-63 T 15-10-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 AM378_20295 89a52098e006016f368d7c10acfcdec7 206 Pfam PF03602 Conserved hypothetical protein 95 21 195 6.5E-60 T 15-10-2018 AM378_20295 89a52098e006016f368d7c10acfcdec7 206 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 132 138 - T 15-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 AM378_20295 89a52098e006016f368d7c10acfcdec7 206 Gene3D G3DSA:3.40.50.150 9 206 6.3E-62 T 15-10-2018 AM378_20295 89a52098e006016f368d7c10acfcdec7 206 PIRSF PIRSF004553 20 199 3.3E-57 T 15-10-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 AM378_20295 89a52098e006016f368d7c10acfcdec7 206 SUPERFAMILY SSF53335 20 197 2.79E-53 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM378_07105 dc364d57f3ff9c39ca9ff0c94165c816 512 Pfam PF13193 AMP-binding enzyme C-terminal domain 429 505 2.7E-20 T 15-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain AM378_07105 dc364d57f3ff9c39ca9ff0c94165c816 512 Pfam PF00501 AMP-binding enzyme 8 420 1.0E-109 T 15-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 AM378_07105 dc364d57f3ff9c39ca9ff0c94165c816 512 Gene3D G3DSA:3.30.300.310 416 512 1.4E-31 T 15-10-2018 AM378_07105 dc364d57f3ff9c39ca9ff0c94165c816 512 ProSitePatterns PS00455 Putative AMP-binding domain signature. 169 180 - T 15-10-2018 IPR020845 AMP-binding, conserved site AM378_07105 dc364d57f3ff9c39ca9ff0c94165c816 512 Gene3D G3DSA:3.40.50.12780 1 413 7.7E-124 T 15-10-2018 AM378_07105 dc364d57f3ff9c39ca9ff0c94165c816 512 SUPERFAMILY SSF56801 4 512 3.66E-156 T 15-10-2018 AM378_05295 f18b5480e9680183c91012fd7fc231ac 780 Gene3D G3DSA:2.60.40.2610 607 697 9.5E-13 T 15-10-2018 AM378_05295 f18b5480e9680183c91012fd7fc231ac 780 Pfam PF13953 PapC C-terminal domain 705 766 1.0E-10 T 15-10-2018 IPR025949 PapC-like, C-terminal domain AM378_05295 f18b5480e9680183c91012fd7fc231ac 780 Gene3D G3DSA:2.60.40.3110 199 288 3.7E-9 T 15-10-2018 AM378_05295 f18b5480e9680183c91012fd7fc231ac 780 Pfam PF00577 Outer membrane usher protein 177 682 1.7E-37 T 15-10-2018 IPR000015 Outer membrane usher protein GO:0009297|GO:0015473|GO:0016020 AM378_14720 32ed05e37ad4686999596e3199be5ef6 379 Gene3D G3DSA:2.40.420.20 35 365 6.1E-79 T 15-10-2018 AM378_14720 32ed05e37ad4686999596e3199be5ef6 379 Gene3D G3DSA:2.40.30.170 40 305 6.1E-79 T 15-10-2018 AM378_14720 32ed05e37ad4686999596e3199be5ef6 379 Gene3D G3DSA:2.40.50.100 51 213 6.1E-79 T 15-10-2018 AM378_14720 32ed05e37ad4686999596e3199be5ef6 379 SUPERFAMILY SSF111369 43 231 5.62E-22 T 15-10-2018 AM378_14720 32ed05e37ad4686999596e3199be5ef6 379 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 332 347 3.3E-5 T 15-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AM378_14720 32ed05e37ad4686999596e3199be5ef6 379 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 63 83 3.3E-5 T 15-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AM378_14720 32ed05e37ad4686999596e3199be5ef6 379 Gene3D G3DSA:1.10.287.470 85 176 6.1E-79 T 15-10-2018 AM378_14720 32ed05e37ad4686999596e3199be5ef6 379 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 51 254 2.9E-16 T 15-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AM378_14720 32ed05e37ad4686999596e3199be5ef6 379 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 29 379 1.1E-41 T 15-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AM378_21180 342eb52c861a707a61c818207f284147 441 SUPERFAMILY SSF54631 200 335 1.08E-20 T 15-10-2018 AM378_21180 342eb52c861a707a61c818207f284147 441 SUPERFAMILY SSF56176 344 428 4.09E-22 T 15-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 AM378_21180 342eb52c861a707a61c818207f284147 441 Pfam PF00571 CBS domain 287 333 0.003 T 15-10-2018 IPR000644 CBS domain AM378_21180 342eb52c861a707a61c818207f284147 441 SMART SM01091 346 426 7.4E-27 T 15-10-2018 IPR005170 Transporter-associated domain AM378_21180 342eb52c861a707a61c818207f284147 441 Gene3D G3DSA:3.10.580.10 193 346 2.1E-33 T 15-10-2018 AM378_21180 342eb52c861a707a61c818207f284147 441 SMART SM00116 221 270 1.3 T 15-10-2018 IPR000644 CBS domain AM378_21180 342eb52c861a707a61c818207f284147 441 SMART SM00116 285 333 10.0 T 15-10-2018 IPR000644 CBS domain AM378_21180 342eb52c861a707a61c818207f284147 441 Gene3D G3DSA:3.30.465.10 347 428 4.5E-29 T 15-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 AM378_21180 342eb52c861a707a61c818207f284147 441 Pfam PF01595 Domain of unknown function DUF21 6 197 6.9E-38 T 15-10-2018 IPR002550 CNNM, transmembrane domain AM378_21180 342eb52c861a707a61c818207f284147 441 Pfam PF03471 Transporter associated domain 348 425 1.5E-20 T 15-10-2018 IPR005170 Transporter-associated domain AM378_01395 a72da5cc10a4954fd0035f74cfd046bf 328 SUPERFAMILY SSF111369 42 100 5.1E-9 T 15-10-2018 AM378_01395 a72da5cc10a4954fd0035f74cfd046bf 328 Gene3D G3DSA:2.40.50.100 43 77 8.3E-13 T 15-10-2018 AM378_01395 a72da5cc10a4954fd0035f74cfd046bf 328 Gene3D G3DSA:1.10.287.470 179 206 1.1E-24 T 15-10-2018 AM378_01395 a72da5cc10a4954fd0035f74cfd046bf 328 Gene3D G3DSA:2.40.50.100 207 241 1.1E-24 T 15-10-2018 AM378_01395 a72da5cc10a4954fd0035f74cfd046bf 328 Gene3D G3DSA:1.10.287.470 108 176 9.8E-8 T 15-10-2018 AM378_01395 a72da5cc10a4954fd0035f74cfd046bf 328 Gene3D G3DSA:1.10.287.470 78 105 8.3E-13 T 15-10-2018 AM378_01395 a72da5cc10a4954fd0035f74cfd046bf 328 Gene3D G3DSA:2.40.30.170 242 321 1.1E-24 T 15-10-2018 AM378_01395 a72da5cc10a4954fd0035f74cfd046bf 328 SUPERFAMILY SSF111369 178 321 2.62E-11 T 15-10-2018 AM378_01395 a72da5cc10a4954fd0035f74cfd046bf 328 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 41 319 4.1E-15 T 15-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AM378_21320 316c7d15fbde63a26eb4b47727dbd8b0 445 TIGRFAM TIGR01455 glmM: phosphoglucosamine mutase 7 442 1.0E-196 T 15-10-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AM378_21320 316c7d15fbde63a26eb4b47727dbd8b0 445 SUPERFAMILY SSF55957 357 444 2.09E-23 T 15-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AM378_21320 316c7d15fbde63a26eb4b47727dbd8b0 445 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 373 441 2.6E-16 T 15-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AM378_21320 316c7d15fbde63a26eb4b47727dbd8b0 445 Gene3D G3DSA:3.40.120.10 257 339 1.7E-61 T 15-10-2018 AM378_21320 316c7d15fbde63a26eb4b47727dbd8b0 445 SUPERFAMILY SSF53738 258 365 4.32E-30 T 15-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AM378_21320 316c7d15fbde63a26eb4b47727dbd8b0 445 Gene3D G3DSA:3.30.310.50 370 445 1.5E-26 T 15-10-2018 AM378_21320 316c7d15fbde63a26eb4b47727dbd8b0 445 Hamap MF_01554_B Phosphoglucosamine mutase [glmM]. 3 444 47.686 T 15-10-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AM378_21320 316c7d15fbde63a26eb4b47727dbd8b0 445 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 174 193 1.1E-13 T 15-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AM378_21320 316c7d15fbde63a26eb4b47727dbd8b0 445 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 95 109 1.1E-13 T 15-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AM378_21320 316c7d15fbde63a26eb4b47727dbd8b0 445 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 234 249 1.1E-13 T 15-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AM378_21320 316c7d15fbde63a26eb4b47727dbd8b0 445 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 258 364 1.4E-30 T 15-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AM378_21320 316c7d15fbde63a26eb4b47727dbd8b0 445 SUPERFAMILY SSF53738 156 256 5.49E-29 T 15-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AM378_21320 316c7d15fbde63a26eb4b47727dbd8b0 445 Gene3D G3DSA:3.40.120.10 174 362 1.7E-61 T 15-10-2018 AM378_21320 316c7d15fbde63a26eb4b47727dbd8b0 445 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 96 105 - T 15-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AM378_21320 316c7d15fbde63a26eb4b47727dbd8b0 445 SUPERFAMILY SSF53738 3 181 2.71E-49 T 15-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AM378_21320 316c7d15fbde63a26eb4b47727dbd8b0 445 Gene3D G3DSA:3.40.120.10 3 154 5.6E-48 T 15-10-2018 AM378_21320 316c7d15fbde63a26eb4b47727dbd8b0 445 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 4 135 7.0E-45 T 15-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AM378_21320 316c7d15fbde63a26eb4b47727dbd8b0 445 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 157 254 3.3E-18 T 15-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AM378_19205 57b981838ccc491892e749e782da4269 308 PRINTS PR00990 Ribokinase signature 175 190 4.1E-36 T 15-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 AM378_19205 57b981838ccc491892e749e782da4269 308 PRINTS PR00990 Ribokinase signature 8 29 4.1E-36 T 15-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 AM378_19205 57b981838ccc491892e749e782da4269 308 PRINTS PR00990 Ribokinase signature 219 230 4.1E-36 T 15-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 AM378_19205 57b981838ccc491892e749e782da4269 308 PRINTS PR00990 Ribokinase signature 107 120 4.1E-36 T 15-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 AM378_19205 57b981838ccc491892e749e782da4269 308 PRINTS PR00990 Ribokinase signature 35 54 4.1E-36 T 15-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 AM378_19205 57b981838ccc491892e749e782da4269 308 Hamap MF_01987 Ribokinase [rbsK]. 4 303 26.394 T 15-10-2018 IPR011877 Ribokinase GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15|Reactome: R-HSA-71336 AM378_19205 57b981838ccc491892e749e782da4269 308 TIGRFAM TIGR02152 D_ribokin_bact: ribokinase 7 301 5.0E-111 T 15-10-2018 IPR011877 Ribokinase GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15|Reactome: R-HSA-71336 AM378_19205 57b981838ccc491892e749e782da4269 308 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 248 261 - T 15-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 AM378_19205 57b981838ccc491892e749e782da4269 308 Gene3D G3DSA:3.40.1190.20 3 302 5.9E-103 T 15-10-2018 IPR029056 Ribokinase-like AM378_19205 57b981838ccc491892e749e782da4269 308 Pfam PF00294 pfkB family carbohydrate kinase 5 296 3.1E-75 T 15-10-2018 IPR011611 Carbohydrate kinase PfkB AM378_19205 57b981838ccc491892e749e782da4269 308 SUPERFAMILY SSF53613 5 304 1.87E-84 T 15-10-2018 IPR029056 Ribokinase-like AM378_17885 b7f38ef68677618eb08785566c5538bf 539 SUPERFAMILY SSF53795 228 539 3.11E-127 T 15-10-2018 AM378_17885 b7f38ef68677618eb08785566c5538bf 539 Gene3D G3DSA:2.170.8.10 46 349 1.3E-236 T 15-10-2018 AM378_17885 b7f38ef68677618eb08785566c5538bf 539 Gene3D G3DSA:3.90.228.20 234 524 1.3E-236 T 15-10-2018 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 AM378_17885 b7f38ef68677618eb08785566c5538bf 539 TIGRFAM TIGR00224 pckA: phosphoenolpyruvate carboxykinase (ATP) 7 539 2.2E-282 T 15-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 AM378_17885 b7f38ef68677618eb08785566c5538bf 539 ProSitePatterns PS00532 Phosphoenolpyruvate carboxykinase (ATP) signature. 264 279 - T 15-10-2018 IPR015994 Phosphoenolpyruvate carboxykinase (ATP), conserved site GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 AM378_17885 b7f38ef68677618eb08785566c5538bf 539 SUPERFAMILY SSF68923 8 226 7.5E-91 T 15-10-2018 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 AM378_17885 b7f38ef68677618eb08785566c5538bf 539 Hamap MF_00453 Phosphoenolpyruvate carboxykinase (ATP) [pckA]. 15 537 54.812 T 15-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 AM378_17885 b7f38ef68677618eb08785566c5538bf 539 Gene3D G3DSA:3.40.449.10 22 233 1.3E-236 T 15-10-2018 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 AM378_17885 b7f38ef68677618eb08785566c5538bf 539 PIRSF PIRSF006294 3 539 3.0E-227 T 15-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 AM378_17885 b7f38ef68677618eb08785566c5538bf 539 Pfam PF01293 Phosphoenolpyruvate carboxykinase 21 490 5.2E-210 T 15-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 AM378_21355 e8c7aef7d360e941a88eb266efaadd7e 136 ProDom PD007327 FACTOR A RIBOSOME-BINDING PROCESSING RRNA 3D-STRUCTURE RIBOSOMAL-BINDING PRECURSOR A RBFA 9 103 2.0E-45 T 15-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 AM378_21355 e8c7aef7d360e941a88eb266efaadd7e 136 Gene3D G3DSA:3.30.300.20 1 111 3.0E-38 T 15-10-2018 IPR015946 K homology domain-like, alpha/beta AM378_21355 e8c7aef7d360e941a88eb266efaadd7e 136 Hamap MF_00003 Ribosome-binding factor A [rbfA]. 6 116 25.676 T 15-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 AM378_21355 e8c7aef7d360e941a88eb266efaadd7e 136 ProSitePatterns PS01319 Ribosome-binding factor A signature. 82 103 - T 15-10-2018 IPR020053 Ribosome-binding factor A, conserved site GO:0006364 AM378_21355 e8c7aef7d360e941a88eb266efaadd7e 136 Pfam PF02033 Ribosome-binding factor A 7 115 8.6E-31 T 15-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 AM378_21355 e8c7aef7d360e941a88eb266efaadd7e 136 SUPERFAMILY SSF89919 2 110 1.31E-31 T 15-10-2018 IPR023799 Ribosome-binding factor A domain superfamily AM378_21355 e8c7aef7d360e941a88eb266efaadd7e 136 TIGRFAM TIGR00082 rbfA: ribosome-binding factor A 1 121 9.5E-41 T 15-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 AM378_19605 004886ca2195bca9f559473512eae138 488 Pfam PF00155 Aminotransferase class I and II 149 467 1.1E-25 T 15-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AM378_19605 004886ca2195bca9f559473512eae138 488 SUPERFAMILY SSF46785 9 77 1.61E-19 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM378_19605 004886ca2195bca9f559473512eae138 488 Gene3D G3DSA:3.90.1150.10 102 472 6.9E-92 T 15-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AM378_19605 004886ca2195bca9f559473512eae138 488 Pfam PF00392 Bacterial regulatory proteins, gntR family 12 74 4.5E-14 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM378_19605 004886ca2195bca9f559473512eae138 488 Gene3D G3DSA:1.10.10.10 8 76 1.5E-20 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_19605 004886ca2195bca9f559473512eae138 488 SUPERFAMILY SSF53383 111 471 2.61E-80 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM378_19605 004886ca2195bca9f559473512eae138 488 SMART SM00345 15 74 3.5E-15 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM378_19605 004886ca2195bca9f559473512eae138 488 Gene3D G3DSA:3.40.640.10 150 368 6.9E-92 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AM378_23825 11d6a9112a716037a9e6cd4a25ab4849 174 SUPERFAMILY SSF81342 3 169 5.73E-26 T 15-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 AM378_23825 11d6a9112a716037a9e6cd4a25ab4849 174 Pfam PF01292 Prokaryotic cytochrome b561 3 169 8.0E-20 T 15-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 AM378_01780 c3ee66ceec7a9d8abcff5d659f3a0f70 301 Pfam PF12802 MarR family 21 76 3.6E-11 T 15-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AM378_01780 c3ee66ceec7a9d8abcff5d659f3a0f70 301 Gene3D G3DSA:3.40.630.30 135 300 3.2E-24 T 15-10-2018 AM378_01780 c3ee66ceec7a9d8abcff5d659f3a0f70 301 Gene3D G3DSA:1.10.10.10 1 131 9.4E-23 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_01780 c3ee66ceec7a9d8abcff5d659f3a0f70 301 SUPERFAMILY SSF46785 9 127 1.51E-21 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM378_01780 c3ee66ceec7a9d8abcff5d659f3a0f70 301 SMART SM00347 14 113 1.5E-9 T 15-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AM378_01780 c3ee66ceec7a9d8abcff5d659f3a0f70 301 Pfam PF00583 Acetyltransferase (GNAT) family 174 273 5.3E-13 T 15-10-2018 IPR000182 GNAT domain AM378_01780 c3ee66ceec7a9d8abcff5d659f3a0f70 301 SUPERFAMILY SSF55729 137 296 2.92E-28 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase AM378_02645 c80e93a7524dfae56b5b675d7354b67b 294 Gene3D G3DSA:3.40.140.10 29 179 2.0E-41 T 15-10-2018 AM378_02645 c80e93a7524dfae56b5b675d7354b67b 294 SUPERFAMILY SSF53927 1 147 5.35E-40 T 15-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 AM378_02645 c80e93a7524dfae56b5b675d7354b67b 294 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 62 139 3.6E-11 T 15-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain AM378_02645 c80e93a7524dfae56b5b675d7354b67b 294 Gene3D G3DSA:3.40.140.10 180 293 6.0E-29 T 15-10-2018 AM378_02645 c80e93a7524dfae56b5b675d7354b67b 294 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 102 136 - T 15-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 AM378_02645 c80e93a7524dfae56b5b675d7354b67b 294 Hamap MF_01558 Cytidine deaminase [cdd]. 1 293 49.52 T 15-10-2018 IPR020797 Cytidine deaminase, bacteria GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199 AM378_02645 c80e93a7524dfae56b5b675d7354b67b 294 PIRSF PIRSF006334 14 294 3.5E-108 T 15-10-2018 AM378_02645 c80e93a7524dfae56b5b675d7354b67b 294 SUPERFAMILY SSF53927 153 289 1.67E-40 T 15-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 AM378_02645 c80e93a7524dfae56b5b675d7354b67b 294 TIGRFAM TIGR01355 cyt_deam_dimer: cytidine deaminase 30 285 1.6E-86 T 15-10-2018 IPR006263 Cytidine deaminase, homodimeric GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199 AM378_02645 c80e93a7524dfae56b5b675d7354b67b 294 Pfam PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region 157 278 1.4E-45 T 15-10-2018 IPR013171 Cytidine/deoxycytidylate deaminase, zinc-binding domain GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199 AM378_14380 351b03e95986f927e2991f99890741c1 281 PIRSF PIRSF004750 6 281 3.1E-126 T 15-10-2018 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 AM378_14380 351b03e95986f927e2991f99890741c1 281 SUPERFAMILY SSF55620 185 266 2.15E-10 T 15-10-2018 AM378_14380 351b03e95986f927e2991f99890741c1 281 Hamap MF_00817 NADPH-dependent 7-cyano-7-deazaguanine reductase [queF]. 1 281 166.465 T 15-10-2018 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 AM378_14380 351b03e95986f927e2991f99890741c1 281 TIGRFAM TIGR03138 QueF: queuine synthase 10 281 3.5E-127 T 15-10-2018 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 AM378_14380 351b03e95986f927e2991f99890741c1 281 Gene3D G3DSA:3.30.1130.10 144 281 2.1E-60 T 15-10-2018 AM378_14380 351b03e95986f927e2991f99890741c1 281 Pfam PF14489 QueF-like protein 195 268 2.5E-27 T 15-10-2018 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF GO:0008616|GO:0033739 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 AM378_14380 351b03e95986f927e2991f99890741c1 281 Pfam PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term 21 131 1.5E-48 T 15-10-2018 IPR029139 NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 AM378_14380 351b03e95986f927e2991f99890741c1 281 Gene3D G3DSA:3.30.1130.10 21 139 2.5E-44 T 15-10-2018 AM378_09910 3fa667f74300bb06b4e8eb42a96aef25 448 Pfam PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE 19 442 3.7E-156 T 15-10-2018 IPR010263 Type VI secretion protein, VC_A0114 AM378_09910 3fa667f74300bb06b4e8eb42a96aef25 448 TIGRFAM TIGR03353 VI_chp_4: type VI secretion protein, VC_A0114 family 6 443 3.2E-144 T 15-10-2018 IPR010263 Type VI secretion protein, VC_A0114 AM378_08275 0fa33cb90b7fb4548b3df4101f54fce7 545 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 89 110 - T 15-10-2018 IPR023765 Solute-binding protein family 5, conserved site AM378_08275 0fa33cb90b7fb4548b3df4101f54fce7 545 Gene3D G3DSA:3.40.190.10 44 526 1.3E-204 T 15-10-2018 AM378_08275 0fa33cb90b7fb4548b3df4101f54fce7 545 Gene3D G3DSA:3.10.105.10 299 514 1.3E-204 T 15-10-2018 AM378_08275 0fa33cb90b7fb4548b3df4101f54fce7 545 SUPERFAMILY SSF53850 37 527 1.63E-145 T 15-10-2018 AM378_08275 0fa33cb90b7fb4548b3df4101f54fce7 545 Gene3D G3DSA:3.90.76.10 73 196 1.3E-204 T 15-10-2018 AM378_08275 0fa33cb90b7fb4548b3df4101f54fce7 545 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 84 465 9.8E-89 T 15-10-2018 IPR000914 Solute-binding protein family 5 domain AM378_08275 0fa33cb90b7fb4548b3df4101f54fce7 545 PIRSF PIRSF002741 1 544 8.2E-110 T 15-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 AM378_20970 298dfcbd654f4ee0e3b29ffd4f94ae6e 325 SUPERFAMILY SSF55681 13 322 6.37E-83 T 15-10-2018 AM378_20970 298dfcbd654f4ee0e3b29ffd4f94ae6e 325 Pfam PF00152 tRNA synthetases class II (D, K and N) 14 321 1.9E-48 T 15-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM378_20970 298dfcbd654f4ee0e3b29ffd4f94ae6e 325 TIGRFAM TIGR00462 genX: EF-P lysine aminoacylase GenX 17 320 5.4E-132 T 15-10-2018 IPR004525 Elongation factor P--(R)-beta-lysine ligase GO:0004824|GO:0005524|GO:0005737|GO:0006430 AM378_20970 298dfcbd654f4ee0e3b29ffd4f94ae6e 325 PRINTS PR00982 Lysyl-tRNA synthetase signature 31 41 4.5E-6 T 15-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 AM378_20970 298dfcbd654f4ee0e3b29ffd4f94ae6e 325 PRINTS PR00982 Lysyl-tRNA synthetase signature 99 116 4.5E-6 T 15-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 AM378_20970 298dfcbd654f4ee0e3b29ffd4f94ae6e 325 Gene3D G3DSA:3.30.930.10 1 324 3.8E-126 T 15-10-2018 AM378_20970 298dfcbd654f4ee0e3b29ffd4f94ae6e 325 Hamap MF_00174 Elongation factor P--(R)-beta-lysine ligase [epmA]. 2 325 56.826 T 15-10-2018 IPR004525 Elongation factor P--(R)-beta-lysine ligase GO:0004824|GO:0005524|GO:0005737|GO:0006430 AM378_08225 304457dce96b12ffe09e98d76d7abfac 187 Gene3D G3DSA:1.10.357.10 5 185 3.0E-35 T 15-10-2018 AM378_08225 304457dce96b12ffe09e98d76d7abfac 187 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 12 25 1.8E-5 T 15-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM378_08225 304457dce96b12ffe09e98d76d7abfac 187 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 33 56 1.8E-5 T 15-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM378_08225 304457dce96b12ffe09e98d76d7abfac 187 SUPERFAMILY SSF46689 2 81 3.75E-16 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AM378_08225 304457dce96b12ffe09e98d76d7abfac 187 Pfam PF00440 Bacterial regulatory proteins, tetR family 13 58 2.7E-9 T 15-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM378_02065 499c533cd28fa60e343c7c03da770fd4 217 Gene3D G3DSA:1.10.10.10 9 118 7.8E-6 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_02065 499c533cd28fa60e343c7c03da770fd4 217 SUPERFAMILY SSF46785 18 197 3.66E-26 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM378_11665 23aac61f8647638971484c2d6f3ffb79 402 Pfam PF03222 Tryptophan/tyrosine permease family 3 389 4.1E-134 T 15-10-2018 IPR018227 Amino acid/polyamine transporter 2 GO:0003333 AM378_11665 23aac61f8647638971484c2d6f3ffb79 402 PRINTS PR00166 Aromatic amino acid permease signature 148 168 1.2E-87 T 15-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 AM378_11665 23aac61f8647638971484c2d6f3ffb79 402 PRINTS PR00166 Aromatic amino acid permease signature 316 334 1.2E-87 T 15-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 AM378_11665 23aac61f8647638971484c2d6f3ffb79 402 PRINTS PR00166 Aromatic amino acid permease signature 82 102 1.2E-87 T 15-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 AM378_11665 23aac61f8647638971484c2d6f3ffb79 402 PRINTS PR00166 Aromatic amino acid permease signature 10 33 1.2E-87 T 15-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 AM378_11665 23aac61f8647638971484c2d6f3ffb79 402 PRINTS PR00166 Aromatic amino acid permease signature 337 356 1.2E-87 T 15-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 AM378_11665 23aac61f8647638971484c2d6f3ffb79 402 PRINTS PR00166 Aromatic amino acid permease signature 182 204 1.2E-87 T 15-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 AM378_11665 23aac61f8647638971484c2d6f3ffb79 402 PRINTS PR00166 Aromatic amino acid permease signature 282 301 1.2E-87 T 15-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 AM378_11665 23aac61f8647638971484c2d6f3ffb79 402 PRINTS PR00166 Aromatic amino acid permease signature 37 56 1.2E-87 T 15-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 AM378_11665 23aac61f8647638971484c2d6f3ffb79 402 PRINTS PR00166 Aromatic amino acid permease signature 221 240 1.2E-87 T 15-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 AM378_11665 23aac61f8647638971484c2d6f3ffb79 402 ProSitePatterns PS00594 Aromatic amino acids permeases signature. 17 33 - T 15-10-2018 IPR013061 Tryptophan/tryrosine permease, conserved site AM378_11665 23aac61f8647638971484c2d6f3ffb79 402 TIGRFAM TIGR00837 araaP: aromatic amino acid transport protein 7 383 5.5E-137 T 15-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 AM378_11665 23aac61f8647638971484c2d6f3ffb79 402 Gene3D G3DSA:1.20.1740.10 2 400 1.9E-8 T 15-10-2018 AM378_11510 0d9c3a4556cd7004df6fe7c9306a08b2 233 Gene3D G3DSA:3.90.850.10 1 233 3.6E-82 T 15-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 AM378_11510 0d9c3a4556cd7004df6fe7c9306a08b2 233 SUPERFAMILY SSF56529 23 232 4.06E-64 T 15-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 AM378_11510 0d9c3a4556cd7004df6fe7c9306a08b2 233 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 28 229 7.3E-49 T 15-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 AM378_02660 9760d5462f32e21e0969f6d150377fc3 404 SUPERFAMILY SSF103473 10 392 1.96E-46 T 15-10-2018 IPR036259 MFS transporter superfamily AM378_02660 9760d5462f32e21e0969f6d150377fc3 404 Pfam PF07690 Major Facilitator Superfamily 12 347 1.6E-30 T 15-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM378_02660 9760d5462f32e21e0969f6d150377fc3 404 Gene3D G3DSA:1.20.1250.20 6 388 6.0E-39 T 15-10-2018 AM378_15835 88fa4170c534547a70e76236078beed8 140 Pfam PF02472 Biopolymer transport protein ExbD/TolR 14 133 1.1E-31 T 15-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 AM378_15835 88fa4170c534547a70e76236078beed8 140 Gene3D G3DSA:3.30.420.270 63 132 3.9E-29 T 15-10-2018 AM378_15835 88fa4170c534547a70e76236078beed8 140 TIGRFAM TIGR02803 ExbD_1: TonB system transport protein ExbD 16 136 1.4E-65 T 15-10-2018 IPR014170 TonB system transport protein ExbD type-1 GO:0016020|GO:0055085 AM378_13730 93052370b4c8ba7641c93e784f254696 87 Pfam PF05930 Prophage CP4-57 regulatory protein (AlpA) 24 74 3.3E-21 T 15-10-2018 IPR010260 DNA-binding transcriptional activator AlpA AM378_17620 62f13dfd8ab74574feb5a95ecab11743 195 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 5 136 6.6E-9 T 15-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain AM378_17620 62f13dfd8ab74574feb5a95ecab11743 195 Gene3D G3DSA:2.40.10.330 71 121 8.2E-60 T 15-10-2018 AM378_17620 62f13dfd8ab74574feb5a95ecab11743 195 SUPERFAMILY SSF54534 2 140 1.1E-33 T 15-10-2018 AM378_17620 62f13dfd8ab74574feb5a95ecab11743 195 Gene3D G3DSA:3.10.50.40 3 154 8.2E-60 T 15-10-2018 AM378_17715 ce86652858fd26ebbfc57b2cc19d5efa 508 SUPERFAMILY SSF52540 19 374 1.11E-51 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_17715 ce86652858fd26ebbfc57b2cc19d5efa 508 Gene3D G3DSA:3.40.50.300 5 175 1.5E-10 T 15-10-2018 AM378_17715 ce86652858fd26ebbfc57b2cc19d5efa 508 Gene3D G3DSA:3.40.50.300 203 380 4.2E-21 T 15-10-2018 AM378_17715 ce86652858fd26ebbfc57b2cc19d5efa 508 Pfam PF05872 Bacterial protein of unknown function (DUF853) 11 508 2.9E-232 T 15-10-2018 IPR033186 Helicase HerA-like C-terminal AM378_04430 fb54da068a6afcee4cff40171df952d2 196 TIGRFAM TIGR02722 lp_: uncharacterized lipoprotein 2 195 3.0E-48 T 15-10-2018 IPR014094 Penicillin-binding protein activator LpoB AM378_04430 fb54da068a6afcee4cff40171df952d2 196 Gene3D G3DSA:3.40.50.10610 60 196 1.7E-51 T 15-10-2018 AM378_04430 fb54da068a6afcee4cff40171df952d2 196 Hamap MF_01889 Penicillin-binding protein activator LpoB [lpoB]. 1 195 36.397 T 15-10-2018 IPR014094 Penicillin-binding protein activator LpoB AM378_04430 fb54da068a6afcee4cff40171df952d2 196 Pfam PF13036 Peptidoglycan-synthase activator LpoB 56 193 1.1E-33 T 15-10-2018 IPR014094 Penicillin-binding protein activator LpoB AM378_18400 f17b51a50740b552bdf448cb9389cc90 280 Pfam PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ 33 278 3.0E-112 T 15-10-2018 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 AM378_18400 f17b51a50740b552bdf448cb9389cc90 280 Gene3D G3DSA:3.40.50.150 1 280 2.2E-120 T 15-10-2018 AM378_18400 f17b51a50740b552bdf448cb9389cc90 280 SUPERFAMILY SSF53335 9 279 1.13E-99 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM378_18400 f17b51a50740b552bdf448cb9389cc90 280 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 241 247 - T 15-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 AM378_18400 f17b51a50740b552bdf448cb9389cc90 280 Hamap MF_00934 Ribosomal RNA large subunit methyltransferase J [rlmJ]. 2 266 41.883 T 15-10-2018 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 AM378_01850 6ffb74e5e203c9be8ca99b4ff2d3c918 335 SUPERFAMILY SSF52374 4 329 1.83E-76 T 15-10-2018 AM378_01850 6ffb74e5e203c9be8ca99b4ff2d3c918 335 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 196 206 3.2E-22 T 15-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 AM378_01850 6ffb74e5e203c9be8ca99b4ff2d3c918 335 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 144 165 3.2E-22 T 15-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 AM378_01850 6ffb74e5e203c9be8ca99b4ff2d3c918 335 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 15 31 3.2E-22 T 15-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 AM378_01850 6ffb74e5e203c9be8ca99b4ff2d3c918 335 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 66 85 3.2E-22 T 15-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 AM378_01850 6ffb74e5e203c9be8ca99b4ff2d3c918 335 Gene3D G3DSA:1.10.240.10 190 297 2.2E-102 T 15-10-2018 AM378_01850 6ffb74e5e203c9be8ca99b4ff2d3c918 335 Gene3D G3DSA:3.40.50.620 5 324 2.2E-102 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM378_01850 6ffb74e5e203c9be8ca99b4ff2d3c918 335 Pfam PF00579 tRNA synthetases class I (W and Y) 4 284 1.1E-50 T 15-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM378_01850 6ffb74e5e203c9be8ca99b4ff2d3c918 335 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 3 329 6.0E-69 T 15-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 AM378_19480 b2bef0548cf82191ea5f7712369e113c 142 Gene3D G3DSA:2.60.40.790 31 134 7.7E-21 T 15-10-2018 IPR008978 HSP20-like chaperone AM378_19480 b2bef0548cf82191ea5f7712369e113c 142 SUPERFAMILY SSF49764 29 133 8.02E-19 T 15-10-2018 IPR008978 HSP20-like chaperone AM378_19480 b2bef0548cf82191ea5f7712369e113c 142 Pfam PF00011 Hsp20/alpha crystallin family 38 133 7.0E-16 T 15-10-2018 IPR002068 Alpha crystallin/Hsp20 domain AM378_24345 00da48603a3f742c778153d4df14482b 192 Pfam PF03923 Uncharacterized lipoprotein 29 188 5.4E-54 T 15-10-2018 IPR005619 Uncharacterised protein family, YajG AM378_00725 6fa678786667b138112bc0744f3c3c7d 310 Gene3D G3DSA:3.90.245.10 1 310 5.7E-125 T 15-10-2018 IPR036452 Ribonucleoside hydrolase-like AM378_00725 6fa678786667b138112bc0744f3c3c7d 310 Pfam PF01156 Inosine-uridine preferring nucleoside hydrolase 3 300 7.1E-91 T 15-10-2018 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain AM378_00725 6fa678786667b138112bc0744f3c3c7d 310 SUPERFAMILY SSF53590 2 309 2.88E-105 T 15-10-2018 IPR036452 Ribonucleoside hydrolase-like AM378_00725 6fa678786667b138112bc0744f3c3c7d 310 ProSitePatterns PS01247 Inosine-uridine preferring nucleoside hydrolase family signature. 8 18 - T 15-10-2018 IPR015910 Inosine/uridine-preferring nucleoside hydrolase, conserved site GO:0016799 AM378_17295 b1401084111d2627b1265eb418e85e76 532 Gene3D G3DSA:1.20.1220.12 411 532 1.3E-50 T 15-10-2018 AM378_17295 b1401084111d2627b1265eb418e85e76 532 TIGRFAM TIGR01344 malate_syn_A: malate synthase A 23 531 1.7E-250 T 15-10-2018 IPR006252 Malate synthase A GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 AM378_17295 b1401084111d2627b1265eb418e85e76 532 ProSitePatterns PS00510 Malate synthase signature. 265 280 - T 15-10-2018 IPR019830 Malate synthase, conserved site GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 AM378_17295 b1401084111d2627b1265eb418e85e76 532 Pfam PF01274 Malate synthase 12 531 4.7E-209 T 15-10-2018 IPR001465 Malate synthase GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 AM378_17295 b1401084111d2627b1265eb418e85e76 532 SUPERFAMILY SSF51645 10 531 2.22E-187 T 15-10-2018 IPR011076 Malate synthase-like superfamily GO:0003824 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 AM378_17295 b1401084111d2627b1265eb418e85e76 532 Gene3D G3DSA:3.20.20.360 2 410 1.6E-194 T 15-10-2018 AM378_17295 b1401084111d2627b1265eb418e85e76 532 PIRSF PIRSF001363 1 532 8.0E-247 T 15-10-2018 IPR006252 Malate synthase A GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 AM378_08690 61ecc0773ff3241e9bd4d16ddf22a209 247 Pfam PF01709 Transcriptional regulator 5 236 9.7E-95 T 15-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM378_08690 61ecc0773ff3241e9bd4d16ddf22a209 247 Gene3D G3DSA:3.30.70.980 130 205 6.2E-61 T 15-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM378_08690 61ecc0773ff3241e9bd4d16ddf22a209 247 Gene3D G3DSA:1.10.10.200 1 81 1.9E-34 T 15-10-2018 IPR017856 Integrase-like, N-terminal AM378_08690 61ecc0773ff3241e9bd4d16ddf22a209 247 SUPERFAMILY SSF75625 3 245 6.67E-97 T 15-10-2018 IPR029072 YebC-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM378_08690 61ecc0773ff3241e9bd4d16ddf22a209 247 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 3 239 36.294 T 15-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM378_08690 61ecc0773ff3241e9bd4d16ddf22a209 247 Gene3D G3DSA:3.30.70.980 85 236 6.2E-61 T 15-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM378_08690 61ecc0773ff3241e9bd4d16ddf22a209 247 TIGRFAM TIGR01033 TIGR01033: DNA-binding regulatory protein, YebC/PmpR family 1 237 2.6E-106 T 15-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM378_17935 521bdc603379956774d5ec8e58eee0d0 771 Pfam PF07670 Nucleoside recognition 354 444 8.8E-13 T 15-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 AM378_17935 521bdc603379956774d5ec8e58eee0d0 771 Pfam PF07670 Nucleoside recognition 513 690 4.4E-36 T 15-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 AM378_17935 521bdc603379956774d5ec8e58eee0d0 771 Pfam PF02421 Ferrous iron transport protein B 5 162 7.5E-63 T 15-10-2018 IPR030389 FeoB-type guanine nucleotide-binding (G) domain GO:0005525 AM378_17935 521bdc603379956774d5ec8e58eee0d0 771 Gene3D G3DSA:3.40.50.300 1 172 3.3E-46 T 15-10-2018 AM378_17935 521bdc603379956774d5ec8e58eee0d0 771 SUPERFAMILY SSF52540 4 170 1.82E-39 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_17935 521bdc603379956774d5ec8e58eee0d0 771 Pfam PF07664 Ferrous iron transport protein B C terminus 456 508 1.6E-21 T 15-10-2018 IPR011640 Ferrous iron transport protein B, C-terminal GO:0015093|GO:0015684|GO:0016021 AM378_17935 521bdc603379956774d5ec8e58eee0d0 771 TIGRFAM TIGR00437 feoB: ferrous iron transport protein B 10 688 1.7E-225 T 15-10-2018 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 AM378_12380 3c9be459e706faf54f471069bda4d1cd 150 Pfam PF05232 Chlorhexidine efflux transporter 6 68 6.1E-26 T 15-10-2018 IPR007896 Chlorhexidine efflux transporter AM378_12380 3c9be459e706faf54f471069bda4d1cd 150 Pfam PF05232 Chlorhexidine efflux transporter 74 137 3.4E-25 T 15-10-2018 IPR007896 Chlorhexidine efflux transporter AM378_13390 14067afef83337f7f4a06d1d492f9173 128 SUPERFAMILY SSF82649 1 125 3.14E-48 T 15-10-2018 AM378_13390 14067afef83337f7f4a06d1d492f9173 128 Gene3D G3DSA:3.90.1010.10 1 128 3.3E-59 T 15-10-2018 AM378_13390 14067afef83337f7f4a06d1d492f9173 128 Pfam PF01592 NifU-like N terminal domain 2 126 1.3E-56 T 15-10-2018 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 AM378_13390 14067afef83337f7f4a06d1d492f9173 128 TIGRFAM TIGR01999 iscU: FeS cluster assembly scaffold IscU 3 125 4.1E-70 T 15-10-2018 IPR011339 ISC system FeS cluster assembly, IscU scaffold GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 AM378_16045 2f712023bdfa94bb56549ddda166efd5 414 Hamap MF_01262 CCA-adding enzyme [cca]. 1 401 45.622 T 15-10-2018 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 AM378_16045 2f712023bdfa94bb56549ddda166efd5 414 Gene3D G3DSA:3.30.460.10 1 121 1.7E-27 T 15-10-2018 AM378_16045 2f712023bdfa94bb56549ddda166efd5 414 Pfam PF01743 Poly A polymerase head domain 3 122 4.5E-18 T 15-10-2018 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 AM378_16045 2f712023bdfa94bb56549ddda166efd5 414 Gene3D G3DSA:1.10.3090.10 122 411 2.1E-45 T 15-10-2018 AM378_16045 2f712023bdfa94bb56549ddda166efd5 414 PIRSF PIRSF000813 1 408 1.5E-200 T 15-10-2018 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 AM378_16045 2f712023bdfa94bb56549ddda166efd5 414 Pfam PF01966 HD domain 231 327 3.0E-11 T 15-10-2018 IPR006674 HD domain AM378_16045 2f712023bdfa94bb56549ddda166efd5 414 SUPERFAMILY SSF81301 2 119 6.1E-31 T 15-10-2018 AM378_16045 2f712023bdfa94bb56549ddda166efd5 414 SUPERFAMILY SSF81891 120 406 2.49E-57 T 15-10-2018 AM378_16045 2f712023bdfa94bb56549ddda166efd5 414 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 149 212 1.9E-17 T 15-10-2018 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 AM378_16045 2f712023bdfa94bb56549ddda166efd5 414 Hamap MF_01261 Multifunctional CCA protein [cca]. 1 407 53.404 T 15-10-2018 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 AM378_20500 d540388dcc11bf8b80973008725ce410 387 SUPERFAMILY SSF53901 263 386 1.23E-43 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 AM378_20500 d540388dcc11bf8b80973008725ce410 387 Pfam PF02803 Thiolase, C-terminal domain 262 386 2.6E-50 T 15-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 AM378_20500 d540388dcc11bf8b80973008725ce410 387 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 87 105 - T 15-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 AM378_20500 d540388dcc11bf8b80973008725ce410 387 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 385 2.5E-145 T 15-10-2018 IPR002155 Thiolase GO:0016747 AM378_20500 d540388dcc11bf8b80973008725ce410 387 Pfam PF00108 Thiolase, N-terminal domain 4 254 1.9E-86 T 15-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 AM378_20500 d540388dcc11bf8b80973008725ce410 387 Gene3D G3DSA:3.40.47.10 4 267 3.6E-155 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 AM378_20500 d540388dcc11bf8b80973008725ce410 387 SUPERFAMILY SSF53901 1 258 1.44E-80 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 AM378_20500 d540388dcc11bf8b80973008725ce410 387 PIRSF PIRSF000429 1 387 1.5E-133 T 15-10-2018 IPR002155 Thiolase GO:0016747 AM378_20500 d540388dcc11bf8b80973008725ce410 387 Hamap MF_01620 3-ketoacyl-CoA thiolase [fadA]. 1 387 61.367 T 15-10-2018 IPR012805 Acetyl-CoA C-acyltransferase FadA GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726 AM378_20500 d540388dcc11bf8b80973008725ce410 387 TIGRFAM TIGR02445 fadA: acetyl-CoA C-acyltransferase FadA 3 387 5.1E-233 T 15-10-2018 IPR012805 Acetyl-CoA C-acyltransferase FadA GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726 AM378_20500 d540388dcc11bf8b80973008725ce410 387 ProSitePatterns PS00737 Thiolases signature 2. 333 349 - T 15-10-2018 IPR020613 Thiolase, conserved site GO:0016747 AM378_20500 d540388dcc11bf8b80973008725ce410 387 Gene3D G3DSA:3.40.47.10 127 381 3.6E-155 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 AM378_20500 d540388dcc11bf8b80973008725ce410 387 ProSitePatterns PS00099 Thiolases active site. 368 381 - T 15-10-2018 IPR020610 Thiolase, active site GO:0016747 AM378_19295 82f0436dccff1ffb5505ea64289d8a49 513 TIGRFAM TIGR00962 atpA: ATP synthase F1, alpha subunit 2 512 1.9E-262 T 15-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM378_19295 82f0436dccff1ffb5505ea64289d8a49 513 Pfam PF00306 ATP synthase alpha/beta chain, C terminal domain 382 507 4.9E-46 T 15-10-2018 IPR000793 ATP synthase, alpha subunit, C-terminal GO:0015986 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM378_19295 82f0436dccff1ffb5505ea64289d8a49 513 Gene3D G3DSA:3.40.50.300 94 382 6.8E-133 T 15-10-2018 AM378_19295 82f0436dccff1ffb5505ea64289d8a49 513 SUPERFAMILY SSF50615 10 94 5.1E-26 T 15-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 AM378_19295 82f0436dccff1ffb5505ea64289d8a49 513 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 149 375 4.2E-73 T 15-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 AM378_19295 82f0436dccff1ffb5505ea64289d8a49 513 Gene3D G3DSA:1.20.150.20 383 513 3.2E-51 T 15-10-2018 IPR038376 ATP synthase, alpha subunit, C-terminal domain superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM378_19295 82f0436dccff1ffb5505ea64289d8a49 513 Gene3D G3DSA:2.40.30.20 1 93 8.2E-30 T 15-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 AM378_19295 82f0436dccff1ffb5505ea64289d8a49 513 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 29 92 2.5E-13 T 15-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 AM378_19295 82f0436dccff1ffb5505ea64289d8a49 513 SUPERFAMILY SSF52540 96 381 4.83E-95 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_19295 82f0436dccff1ffb5505ea64289d8a49 513 Hamap MF_01346 ATP synthase subunit alpha [atpA]. 1 512 50.449 T 15-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM378_19295 82f0436dccff1ffb5505ea64289d8a49 513 SUPERFAMILY SSF47917 383 511 4.97E-47 T 15-10-2018 AM378_19295 82f0436dccff1ffb5505ea64289d8a49 513 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 366 375 - T 15-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 AM378_19295 82f0436dccff1ffb5505ea64289d8a49 513 PIRSF PIRSF039088 1 513 6.4E-232 T 15-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM378_16670 fdb1c4bb9654cb1cfc1e012fd5346fcf 284 PIRSF PIRSF005052 1 284 3.2E-114 T 15-10-2018 IPR005337 RapZ-like family GO:0005524 AM378_16670 fdb1c4bb9654cb1cfc1e012fd5346fcf 284 Hamap MF_00636 RNase adapter protein RapZ [rapZ]. 1 281 40.972 T 15-10-2018 IPR005337 RapZ-like family GO:0005524 AM378_16670 fdb1c4bb9654cb1cfc1e012fd5346fcf 284 Pfam PF03668 P-loop ATPase protein family 1 282 1.3E-144 T 15-10-2018 IPR005337 RapZ-like family GO:0005524 AM378_16670 fdb1c4bb9654cb1cfc1e012fd5346fcf 284 SUPERFAMILY SSF52540 2 151 2.81E-12 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_21675 e74f90cc7a94724aae6f2a6754d73484 356 TIGRFAM TIGR04408 LptG_lptG: LPS export ABC transporter permease LptG 4 354 4.7E-142 T 15-10-2018 IPR030923 LPS export ABC transporter permease LptG GO:0043190|GO:0055085 AM378_21675 e74f90cc7a94724aae6f2a6754d73484 356 Pfam PF03739 Predicted permease YjgP/YjgQ family 7 354 3.2E-74 T 15-10-2018 IPR005495 Permease LptG/LptF-related GO:0016021 AM378_10275 db24b19714ffd4780a75bd0a61340747 129 Pfam PF06078 Bacterial protein of unknown function (DUF937) 6 105 5.0E-10 T 15-10-2018 IPR009282 Protein of unknown function DUF937 AM378_10275 db24b19714ffd4780a75bd0a61340747 129 Gene3D G3DSA:1.10.10.690 1 129 2.0E-41 T 15-10-2018 IPR027405 YidB-like AM378_10275 db24b19714ffd4780a75bd0a61340747 129 SUPERFAMILY SSF140804 8 118 1.29E-33 T 15-10-2018 IPR027405 YidB-like AM378_04740 cec7016904b51cbdb33130c1adf24569 446 Pfam PF00419 Fimbrial protein 262 446 9.8E-25 T 15-10-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM378_04740 cec7016904b51cbdb33130c1adf24569 446 PIRSF PIRSF029766 14 446 7.2E-130 T 15-10-2018 IPR011228 Uncharacterised conserved protein UCP029766 AM378_04740 cec7016904b51cbdb33130c1adf24569 446 SUPERFAMILY SSF49401 266 444 1.8E-8 T 15-10-2018 IPR008966 Adhesion domain superfamily AM378_04740 cec7016904b51cbdb33130c1adf24569 446 Gene3D G3DSA:2.60.40.1090 265 444 2.3E-5 T 15-10-2018 IPR036937 Fimbrial-type adhesion domain superfamily GO:0007155|GO:0009289 AM378_00765 f7a2b707d58eef871e924791a3677506 157 SUPERFAMILY SSF55486 3 150 3.66E-50 T 15-10-2018 AM378_00765 f7a2b707d58eef871e924791a3677506 157 ProSitePatterns PS01306 Uncharacterized protein family UPF0054 signature. 114 124 - T 15-10-2018 IPR020549 Endoribonuclease YbeY, conserved site AM378_00765 f7a2b707d58eef871e924791a3677506 157 Hamap MF_00009 Endoribonuclease YbeY [ybeY]. 5 148 24.987 T 15-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 AM378_00765 f7a2b707d58eef871e924791a3677506 157 Gene3D G3DSA:3.40.390.30 1 155 3.1E-61 T 15-10-2018 IPR023091 Metalloprotease catalytic domain superfamily, predicted GO:0004222 AM378_00765 f7a2b707d58eef871e924791a3677506 157 Pfam PF02130 Uncharacterized protein family UPF0054 21 143 1.2E-39 T 15-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 AM378_00765 f7a2b707d58eef871e924791a3677506 157 TIGRFAM TIGR00043 TIGR00043: rRNA maturation RNase YbeY 40 144 3.5E-37 T 15-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 AM378_03600 3e9f8754e17ff178e4ec35cba544cdda 401 TIGRFAM TIGR01514 NAPRTase: nicotinate phosphoribosyltransferase 8 395 9.3E-165 T 15-10-2018 IPR006406 Nicotinate phosphoribosyltransferase GO:0004516|GO:0019357 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 AM378_03600 3e9f8754e17ff178e4ec35cba544cdda 401 PIRSF PIRSF000484 1 396 2.9E-60 T 15-10-2018 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264 AM378_03600 3e9f8754e17ff178e4ec35cba544cdda 401 Hamap MF_00570 Nicotinate phosphoribosyltransferase [pncB]. 5 396 48.673 T 15-10-2018 IPR006406 Nicotinate phosphoribosyltransferase GO:0004516|GO:0019357 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 AM378_03600 3e9f8754e17ff178e4ec35cba544cdda 401 Gene3D G3DSA:3.20.140.10 1 401 1.5E-165 T 15-10-2018 AM378_03600 3e9f8754e17ff178e4ec35cba544cdda 401 Pfam PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family 169 395 2.3E-80 T 15-10-2018 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264 AM378_03600 3e9f8754e17ff178e4ec35cba544cdda 401 SUPERFAMILY SSF51690 120 393 1.18E-85 T 15-10-2018 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 AM378_03600 3e9f8754e17ff178e4ec35cba544cdda 401 SUPERFAMILY SSF54675 2 137 5.89E-42 T 15-10-2018 AM378_04880 cfff29f36602d6ae64d5514898ed82f4 234 Gene3D G3DSA:3.40.50.300 4 231 5.3E-65 T 15-10-2018 AM378_04880 cfff29f36602d6ae64d5514898ed82f4 234 SMART SM00382 35 223 1.4E-13 T 15-10-2018 IPR003593 AAA+ ATPase domain AM378_04880 cfff29f36602d6ae64d5514898ed82f4 234 SUPERFAMILY SSF52540 6 226 7.53E-68 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_04880 cfff29f36602d6ae64d5514898ed82f4 234 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM378_04880 cfff29f36602d6ae64d5514898ed82f4 234 Pfam PF00005 ABC transporter 26 174 1.0E-35 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM378_04880 cfff29f36602d6ae64d5514898ed82f4 234 TIGRFAM TIGR02211 LolD_lipo_ex: lipoprotein releasing system, ATP-binding protein 6 225 7.3E-109 T 15-10-2018 IPR011924 Lipoprotein releasing system, ATP-binding protein GO:0005524|GO:0016020|GO:0044873 AM378_24285 7fab6592255885874f43ff97f307eb27 525 SMART SM00912 38 158 8.9E-36 T 15-10-2018 IPR008638 Filamentous haemagglutinin, N-terminal AM378_24285 7fab6592255885874f43ff97f307eb27 525 Pfam PF05594 Haemagluttinin repeat 410 477 0.005 T 15-10-2018 IPR008619 Filamentous haemagglutinin repeat AM378_24285 7fab6592255885874f43ff97f307eb27 525 TIGRFAM TIGR01901 adhes_NPXG: filamentous hemagglutinin family N-terminal domain 56 153 1.2E-20 T 15-10-2018 IPR008638 Filamentous haemagglutinin, N-terminal AM378_24285 7fab6592255885874f43ff97f307eb27 525 Gene3D G3DSA:2.160.20.10 25 305 6.8E-80 T 15-10-2018 IPR012334 Pectin lyase fold AM378_24285 7fab6592255885874f43ff97f307eb27 525 Pfam PF05860 haemagglutination activity domain 37 157 5.2E-27 T 15-10-2018 IPR008638 Filamentous haemagglutinin, N-terminal AM378_24285 7fab6592255885874f43ff97f307eb27 525 SUPERFAMILY SSF51126 39 268 3.45E-52 T 15-10-2018 IPR011050 Pectin lyase fold/virulence factor AM378_24285 7fab6592255885874f43ff97f307eb27 525 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 353 386 0.068 T 15-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat AM378_24285 7fab6592255885874f43ff97f307eb27 525 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 317 348 1.3 T 15-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat AM378_24285 7fab6592255885874f43ff97f307eb27 525 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 392 425 1.2E-7 T 15-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat AM378_24285 7fab6592255885874f43ff97f307eb27 525 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 427 464 0.3 T 15-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat AM378_07505 3a50b0ce9ba4916543ccf22b2ba2722d 388 Gene3D G3DSA:3.40.50.10490 204 377 2.2E-54 T 15-10-2018 AM378_07505 3a50b0ce9ba4916543ccf22b2ba2722d 388 Gene3D G3DSA:3.40.50.10490 4 201 9.3E-56 T 15-10-2018 AM378_07505 3a50b0ce9ba4916543ccf22b2ba2722d 388 SUPERFAMILY SSF53697 20 374 2.1E-52 T 15-10-2018 AM378_07505 3a50b0ce9ba4916543ccf22b2ba2722d 388 TIGRFAM TIGR02815 agaS_fam: putative sugar isomerase, AgaS family 16 383 8.5E-163 T 15-10-2018 IPR014180 Sugar isomerase, AgaS GO:0016853 AM378_07505 3a50b0ce9ba4916543ccf22b2ba2722d 388 Pfam PF01380 SIS domain 53 190 1.4E-16 T 15-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 AM378_17925 c961f2ab64026329ae83b5b38af8ac93 777 SUPERFAMILY SSF50249 637 721 3.93E-25 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold AM378_17925 c961f2ab64026329ae83b5b38af8ac93 777 Pfam PF16921 Tex protein YqgF-like domain 327 450 1.8E-49 T 15-10-2018 IPR032639 Tex protein, YqgF-like domain AM378_17925 c961f2ab64026329ae83b5b38af8ac93 777 Gene3D G3DSA:1.10.3500.10 112 497 1.1E-153 T 15-10-2018 IPR023323 Tex-like domain superfamily AM378_17925 c961f2ab64026329ae83b5b38af8ac93 777 SUPERFAMILY SSF47781 559 631 3.56E-19 T 15-10-2018 IPR010994 RuvA domain 2-like AM378_17925 c961f2ab64026329ae83b5b38af8ac93 777 Gene3D G3DSA:1.10.10.650 3 109 3.5E-40 T 15-10-2018 IPR023319 Tex-like protein, HTH domain superfamily AM378_17925 c961f2ab64026329ae83b5b38af8ac93 777 Pfam PF00575 S1 RNA binding domain 647 719 2.2E-23 T 15-10-2018 IPR003029 S1 domain GO:0003676 AM378_17925 c961f2ab64026329ae83b5b38af8ac93 777 Gene3D G3DSA:1.10.150.310 498 629 9.1E-50 T 15-10-2018 AM378_17925 c961f2ab64026329ae83b5b38af8ac93 777 SUPERFAMILY SSF53098 322 468 1.42E-49 T 15-10-2018 IPR012337 Ribonuclease H-like superfamily AM378_17925 c961f2ab64026329ae83b5b38af8ac93 777 SUPERFAMILY SSF47781 469 557 2.11E-28 T 15-10-2018 IPR010994 RuvA domain 2-like AM378_17925 c961f2ab64026329ae83b5b38af8ac93 777 Pfam PF12836 Helix-hairpin-helix motif 490 554 2.4E-28 T 15-10-2018 AM378_17925 c961f2ab64026329ae83b5b38af8ac93 777 SMART SM00316 648 719 2.1E-26 T 15-10-2018 IPR022967 RNA-binding domain, S1 AM378_17925 c961f2ab64026329ae83b5b38af8ac93 777 Gene3D G3DSA:3.30.420.140 325 450 1.1E-153 T 15-10-2018 IPR037027 YqgF/RNase H-like domain superfamily GO:0006139 AM378_17925 c961f2ab64026329ae83b5b38af8ac93 777 SMART SM00732 326 423 9.0E-33 T 15-10-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 AM378_17925 c961f2ab64026329ae83b5b38af8ac93 777 Pfam PF09371 Tex-like protein N-terminal domain 9 193 6.4E-71 T 15-10-2018 IPR018974 Tex-like protein, N-terminal AM378_17925 c961f2ab64026329ae83b5b38af8ac93 777 SUPERFAMILY SSF158832 4 321 1.31E-120 T 15-10-2018 AM378_17925 c961f2ab64026329ae83b5b38af8ac93 777 Gene3D G3DSA:2.40.50.140 630 723 3.3E-29 T 15-10-2018 AM378_10975 73a6eff9974f054969a50ac60b92b8ba 450 ProSitePatterns PS00216 Sugar transport proteins signature 1. 79 95 - T 15-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AM378_10975 73a6eff9974f054969a50ac60b92b8ba 450 Pfam PF00083 Sugar (and other) transporter 19 450 1.3E-30 T 15-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 AM378_10975 73a6eff9974f054969a50ac60b92b8ba 450 ProSitePatterns PS00217 Sugar transport proteins signature 2. 121 146 - T 15-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AM378_10975 73a6eff9974f054969a50ac60b92b8ba 450 SUPERFAMILY SSF103473 7 449 3.01E-66 T 15-10-2018 IPR036259 MFS transporter superfamily AM378_10975 73a6eff9974f054969a50ac60b92b8ba 450 Gene3D G3DSA:1.20.1250.20 10 450 3.0E-69 T 15-10-2018 AM378_18905 e5dc69959bd721f2c83bcf38eb311bb5 413 Pfam PF04932 O-Antigen ligase 189 346 6.2E-9 T 15-10-2018 IPR007016 O-antigen ligase-related AM378_23190 782f4705b528c9d69607519c81a31cc5 252 Gene3D G3DSA:3.40.50.720 1 251 2.5E-82 T 15-10-2018 AM378_23190 782f4705b528c9d69607519c81a31cc5 252 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 141 169 - T 15-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AM378_23190 782f4705b528c9d69607519c81a31cc5 252 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 4 189 8.1E-5 T 15-10-2018 AM378_23190 782f4705b528c9d69607519c81a31cc5 252 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 247 3.5E-66 T 15-10-2018 AM378_23190 782f4705b528c9d69607519c81a31cc5 252 SUPERFAMILY SSF51735 3 249 1.25E-78 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily AM378_23190 782f4705b528c9d69607519c81a31cc5 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 3.3E-38 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_23190 782f4705b528c9d69607519c81a31cc5 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 5 22 3.3E-38 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_23190 782f4705b528c9d69607519c81a31cc5 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 3.3E-38 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_23190 782f4705b528c9d69607519c81a31cc5 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 3.3E-38 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_23190 782f4705b528c9d69607519c81a31cc5 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 3.3E-38 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_23190 782f4705b528c9d69607519c81a31cc5 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 210 230 3.3E-38 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_23190 782f4705b528c9d69607519c81a31cc5 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 4.3E-9 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_23190 782f4705b528c9d69607519c81a31cc5 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 4.3E-9 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_23190 782f4705b528c9d69607519c81a31cc5 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 4.3E-9 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_17970 99bba2d59741425926590e78ae388374 801 TIGRFAM TIGR02093 P_ylase: glycogen/starch/alpha-glucan phosphorylases 14 798 0.0 T 15-10-2018 IPR011833 Glycogen/starch/alpha-glucan phosphorylase GO:0004645|GO:0005975|GO:0030170 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 AM378_17970 99bba2d59741425926590e78ae388374 801 ProSitePatterns PS00102 Phosphorylase pyridoxal-phosphate attachment site. 643 655 - T 15-10-2018 IPR035090 Phosphorylase pyridoxal-phosphate attachment site KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 AM378_17970 99bba2d59741425926590e78ae388374 801 PIRSF PIRSF000460 2 801 3.4E-208 T 15-10-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 AM378_17970 99bba2d59741425926590e78ae388374 801 SUPERFAMILY SSF53756 6 799 5.18E-295 T 15-10-2018 AM378_17970 99bba2d59741425926590e78ae388374 801 Gene3D G3DSA:3.40.50.2000 457 784 0.0 T 15-10-2018 AM378_17970 99bba2d59741425926590e78ae388374 801 Pfam PF00343 Carbohydrate phosphorylase 94 798 0.0 T 15-10-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 AM378_17970 99bba2d59741425926590e78ae388374 801 Gene3D G3DSA:3.40.50.2000 61 798 0.0 T 15-10-2018 AM378_07850 f175ceae0667357edf51a707d3a5f89e 436 SUPERFAMILY SSF103473 21 435 1.19E-58 T 15-10-2018 IPR036259 MFS transporter superfamily AM378_07850 f175ceae0667357edf51a707d3a5f89e 436 Pfam PF07690 Major Facilitator Superfamily 29 363 1.3E-24 T 15-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM378_07850 f175ceae0667357edf51a707d3a5f89e 436 ProSitePatterns PS00217 Sugar transport proteins signature 2. 134 159 - T 15-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AM378_07850 f175ceae0667357edf51a707d3a5f89e 436 Gene3D G3DSA:1.20.1250.20 21 436 3.0E-62 T 15-10-2018 AM378_12725 64f7178924ba9f8209b74185508efb1f 108 Pfam PF05106 Phage holin family (Lysis protein S) 5 101 6.1E-28 T 15-10-2018 IPR006481 Bacteriophage lambda, GpS, holin AM378_12725 64f7178924ba9f8209b74185508efb1f 108 TIGRFAM TIGR01594 holin_lambda: phage holin, lambda family 5 104 3.6E-23 T 15-10-2018 IPR006481 Bacteriophage lambda, GpS, holin AM378_17965 69907189d6faa215a31b7d76bd1da268 696 TIGRFAM TIGR00217 malQ: 4-alpha-glucanotransferase 101 688 1.4E-243 T 15-10-2018 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 AM378_17965 69907189d6faa215a31b7d76bd1da268 696 SUPERFAMILY SSF51445 143 685 6.32E-150 T 15-10-2018 IPR017853 Glycoside hydrolase superfamily AM378_17965 69907189d6faa215a31b7d76bd1da268 696 Gene3D G3DSA:3.20.20.80 142 685 4.7E-125 T 15-10-2018 AM378_17965 69907189d6faa215a31b7d76bd1da268 696 Pfam PF02446 4-alpha-glucanotransferase 149 667 4.2E-132 T 15-10-2018 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 AM378_24155 a92d13d80008bba4aa821f4d60a6dda6 320 SUPERFAMILY SSF53850 25 309 4.0E-66 T 15-10-2018 AM378_24155 a92d13d80008bba4aa821f4d60a6dda6 320 Gene3D G3DSA:3.40.190.10 28 298 2.5E-104 T 15-10-2018 AM378_24155 a92d13d80008bba4aa821f4d60a6dda6 320 Gene3D G3DSA:3.40.190.10 113 255 2.5E-104 T 15-10-2018 AM378_24155 a92d13d80008bba4aa821f4d60a6dda6 320 TIGRFAM TIGR02136 ptsS_2: phosphate binding protein 27 297 2.4E-68 T 15-10-2018 IPR011862 Phosphate binding protein GO:0042301 AM378_24155 a92d13d80008bba4aa821f4d60a6dda6 320 Pfam PF12849 PBP superfamily domain 29 283 2.3E-28 T 15-10-2018 IPR024370 PBP domain AM378_08125 af3857ca67cf3b59f1a606d35bef2973 210 ProSitePatterns PS00695 Enterobacterial virulence outer membrane protein signature 2. 202 210 - T 15-10-2018 IPR000758 Virulence-related outer membrane protein GO:0009279 AM378_08125 af3857ca67cf3b59f1a606d35bef2973 210 Pfam PF03922 OmpW family 22 210 8.4E-64 T 15-10-2018 IPR005618 Outer membrane protein, OmpW GO:0019867 AM378_08125 af3857ca67cf3b59f1a606d35bef2973 210 Gene3D G3DSA:2.40.160.20 21 210 1.4E-75 T 15-10-2018 AM378_08125 af3857ca67cf3b59f1a606d35bef2973 210 SUPERFAMILY SSF56925 22 210 4.71E-29 T 15-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel AM378_20110 590d724f0ed969471105ebcdb93d8e91 850 PIRSF PIRSF001444 1 850 0.0 T 15-10-2018 IPR000274 Adenylate cyclase, class-I GO:0004016|GO:0006171 KEGG: 00230+4.6.1.1 AM378_20110 590d724f0ed969471105ebcdb93d8e91 850 Pfam PF12633 Adenylate cyclase NT domain 5 200 2.5E-81 T 15-10-2018 IPR024685 Adenylate cyclase class-I, N-terminal domain KEGG: 00230+4.6.1.1 AM378_20110 590d724f0ed969471105ebcdb93d8e91 850 ProSitePatterns PS01093 Adenylate cyclase class-I signature 2. 598 612 - T 15-10-2018 IPR024686 Adenylate cyclase class-I, conserved site KEGG: 00230+4.6.1.1 AM378_20110 590d724f0ed969471105ebcdb93d8e91 850 Pfam PF01295 Adenylate cyclase, class-I 228 825 5.6E-262 T 15-10-2018 IPR000274 Adenylate cyclase, class-I GO:0004016|GO:0006171 KEGG: 00230+4.6.1.1 AM378_20110 590d724f0ed969471105ebcdb93d8e91 850 ProSitePatterns PS01092 Adenylate cyclase class-I signature 1. 242 253 - T 15-10-2018 IPR024686 Adenylate cyclase class-I, conserved site KEGG: 00230+4.6.1.1 AM378_03500 2e67aa4983964f1a64632ed21be67e90 582 TIGRFAM TIGR02203 MsbA_lipidA: lipid A export permease/ATP-binding protein MsbA 12 581 1.1E-265 T 15-10-2018 IPR011917 ABC transporter, lipid A export, MsbA GO:0005524|GO:0016021|GO:0034040 AM378_03500 2e67aa4983964f1a64632ed21be67e90 582 Gene3D G3DSA:3.40.50.300 329 581 1.3E-97 T 15-10-2018 AM378_03500 2e67aa4983964f1a64632ed21be67e90 582 SUPERFAMILY SSF52540 333 580 1.92E-96 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_03500 2e67aa4983964f1a64632ed21be67e90 582 ProSitePatterns PS00211 ABC transporters family signature. 481 495 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM378_03500 2e67aa4983964f1a64632ed21be67e90 582 SMART SM00382 368 555 1.8E-18 T 15-10-2018 IPR003593 AAA+ ATPase domain AM378_03500 2e67aa4983964f1a64632ed21be67e90 582 Pfam PF00664 ABC transporter transmembrane region 27 297 4.4E-58 T 15-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 AM378_03500 2e67aa4983964f1a64632ed21be67e90 582 Gene3D G3DSA:1.20.1560.10 2 328 5.9E-79 T 15-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 AM378_03500 2e67aa4983964f1a64632ed21be67e90 582 SUPERFAMILY SSF90123 14 327 6.28E-73 T 15-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 AM378_03500 2e67aa4983964f1a64632ed21be67e90 582 Pfam PF00005 ABC transporter 359 509 1.3E-35 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM378_20045 109f685ec50b3028fc88fdbc0770f449 455 Hamap MF_01003 Probable ECA polymerase [wzyE]. 1 447 39.322 T 15-10-2018 IPR010691 Probable ECA polymerase WzyE GO:0009246|GO:0016021 AM378_20045 109f685ec50b3028fc88fdbc0770f449 455 Pfam PF06899 WzyE protein, O-antigen assembly polymerase 1 441 9.0E-260 T 15-10-2018 IPR010691 Probable ECA polymerase WzyE GO:0009246|GO:0016021 AM378_10700 48193768f0eaf6b8b2217bf0a5692a4a 487 Pfam PF10423 Bacterial AMP nucleoside phosphorylase N-terminus 14 169 6.5E-56 T 15-10-2018 IPR018953 AMP nucleoside phosphorylase, N-terminal KEGG: 00230+3.2.2.4|MetaCyc: PWY-6617 AM378_10700 48193768f0eaf6b8b2217bf0a5692a4a 487 Gene3D G3DSA:3.30.1730.10 6 175 1.2E-64 T 15-10-2018 IPR037109 AMP nucleoside phosphorylase, N-terminal domain superfamily KEGG: 00230+3.2.2.4|MetaCyc: PWY-6617 AM378_10700 48193768f0eaf6b8b2217bf0a5692a4a 487 SUPERFAMILY SSF53167 11 487 4.06E-156 T 15-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 AM378_10700 48193768f0eaf6b8b2217bf0a5692a4a 487 Gene3D G3DSA:3.40.50.1580 176 487 1.4E-113 T 15-10-2018 AM378_10700 48193768f0eaf6b8b2217bf0a5692a4a 487 Pfam PF01048 Phosphorylase superfamily 272 433 4.0E-19 T 15-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 AM378_10700 48193768f0eaf6b8b2217bf0a5692a4a 487 TIGRFAM TIGR01717 AMP-nucleosdse: AMP nucleosidase 13 487 2.2E-234 T 15-10-2018 IPR011271 AMP nucleosidase GO:0008714|GO:0009116|GO:0044209 KEGG: 00230+3.2.2.4|MetaCyc: PWY-6617 AM378_10700 48193768f0eaf6b8b2217bf0a5692a4a 487 Hamap MF_01932 AMP nucleosidase [amn]. 5 487 58.413 T 15-10-2018 IPR011271 AMP nucleosidase GO:0008714|GO:0009116|GO:0044209 KEGG: 00230+3.2.2.4|MetaCyc: PWY-6617 AM378_10385 8c80beebae6950302d6c2894b2f766e6 467 ProSitePatterns PS00218 Amino acid permeases signature. 50 80 - T 15-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 AM378_10385 8c80beebae6950302d6c2894b2f766e6 467 PIRSF PIRSF006060 4 457 1.8E-65 T 15-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 AM378_10385 8c80beebae6950302d6c2894b2f766e6 467 Pfam PF00324 Amino acid permease 26 429 2.9E-85 T 15-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 AM378_10385 8c80beebae6950302d6c2894b2f766e6 467 Gene3D G3DSA:1.20.1740.10 17 457 1.1E-59 T 15-10-2018 AM378_13680 de2f90a71e9269f4b3b18c63d9a63ce1 553 Pfam PF02463 RecF/RecN/SMC N terminal domain 1 512 1.3E-18 T 15-10-2018 IPR003395 RecF/RecN/SMC, N-terminal AM378_13680 de2f90a71e9269f4b3b18c63d9a63ce1 553 PIRSF PIRSF003128 1 553 5.6E-155 T 15-10-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 AM378_13680 de2f90a71e9269f4b3b18c63d9a63ce1 553 SUPERFAMILY SSF52540 1 516 1.28E-67 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_13680 de2f90a71e9269f4b3b18c63d9a63ce1 553 Gene3D G3DSA:3.40.50.300 1 252 1.5E-46 T 15-10-2018 AM378_13680 de2f90a71e9269f4b3b18c63d9a63ce1 553 Gene3D G3DSA:3.40.50.300 256 553 4.9E-50 T 15-10-2018 AM378_13680 de2f90a71e9269f4b3b18c63d9a63ce1 553 TIGRFAM TIGR00634 recN: DNA repair protein RecN 1 552 7.9E-166 T 15-10-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 AM378_04815 30f55150c64b267529f964cad68621a6 288 Pfam PF08544 GHMP kinases C terminal 201 262 7.9E-6 T 15-10-2018 IPR013750 GHMP kinase, C-terminal domain AM378_04815 30f55150c64b267529f964cad68621a6 288 Hamap MF_00061 Putative 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [ispE]. 3 275 32.436 T 15-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 AM378_04815 30f55150c64b267529f964cad68621a6 288 Gene3D G3DSA:3.30.70.890 165 282 6.3E-27 T 15-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily AM378_04815 30f55150c64b267529f964cad68621a6 288 Pfam PF00288 GHMP kinases N terminal domain 91 148 3.0E-10 T 15-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 AM378_04815 30f55150c64b267529f964cad68621a6 288 Gene3D G3DSA:3.30.230.10 2 163 3.5E-57 T 15-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AM378_04815 30f55150c64b267529f964cad68621a6 288 SUPERFAMILY SSF54211 3 162 3.19E-49 T 15-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AM378_04815 30f55150c64b267529f964cad68621a6 288 SUPERFAMILY SSF55060 165 281 9.59E-36 T 15-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily AM378_04815 30f55150c64b267529f964cad68621a6 288 PIRSF PIRSF010376 1 283 1.3E-85 T 15-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 AM378_04815 30f55150c64b267529f964cad68621a6 288 TIGRFAM TIGR00154 ispE: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase 3 280 1.7E-105 T 15-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 AM378_02445 f72b1ccf4c7690adeeb2ebfc8cd29ace 228 Gene3D G3DSA:2.60.40.10 19 137 1.7E-37 T 15-10-2018 IPR013783 Immunoglobulin-like fold AM378_02445 f72b1ccf4c7690adeeb2ebfc8cd29ace 228 SUPERFAMILY SSF49584 130 222 6.41E-18 T 15-10-2018 IPR036316 Pili assembly chaperone, C-terminal domain superfamily AM378_02445 f72b1ccf4c7690adeeb2ebfc8cd29ace 228 ProSitePatterns PS00635 Gram-negative pili assembly chaperone signature. 94 111 - T 15-10-2018 IPR018046 Pili assembly chaperone, conserved site AM378_02445 f72b1ccf4c7690adeeb2ebfc8cd29ace 228 Gene3D G3DSA:2.60.40.10 139 224 2.2E-16 T 15-10-2018 IPR013783 Immunoglobulin-like fold AM378_02445 f72b1ccf4c7690adeeb2ebfc8cd29ace 228 PRINTS PR00969 Pili chaperone signature 95 112 2.2E-29 T 15-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM378_02445 f72b1ccf4c7690adeeb2ebfc8cd29ace 228 PRINTS PR00969 Pili chaperone signature 118 133 2.2E-29 T 15-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM378_02445 f72b1ccf4c7690adeeb2ebfc8cd29ace 228 PRINTS PR00969 Pili chaperone signature 153 168 2.2E-29 T 15-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM378_02445 f72b1ccf4c7690adeeb2ebfc8cd29ace 228 PRINTS PR00969 Pili chaperone signature 20 29 2.2E-29 T 15-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM378_02445 f72b1ccf4c7690adeeb2ebfc8cd29ace 228 PRINTS PR00969 Pili chaperone signature 67 88 2.2E-29 T 15-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM378_02445 f72b1ccf4c7690adeeb2ebfc8cd29ace 228 SUPERFAMILY SSF49354 15 136 6.54E-39 T 15-10-2018 IPR008962 PapD-like superfamily AM378_02445 f72b1ccf4c7690adeeb2ebfc8cd29ace 228 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 158 220 8.7E-12 T 15-10-2018 IPR016148 Pili assembly chaperone, C-terminal AM378_02445 f72b1ccf4c7690adeeb2ebfc8cd29ace 228 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 19 136 2.6E-39 T 15-10-2018 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 AM378_09015 b2c1c1c1a0490fe3213d6074cc95bbb9 327 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 45 319 5.0E-62 T 15-10-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0016788 AM378_09015 b2c1c1c1a0490fe3213d6074cc95bbb9 327 TIGRFAM TIGR03242 arg_catab_astE: succinylglutamate desuccinylase 3 318 7.5E-132 T 15-10-2018 IPR016681 Succinylglutamate desuccinylase GO:0008270|GO:0009017|GO:0019544|GO:0019545 KEGG: 00330+3.5.1.96 AM378_09015 b2c1c1c1a0490fe3213d6074cc95bbb9 327 SUPERFAMILY SSF53187 1 318 3.97E-86 T 15-10-2018 AM378_09015 b2c1c1c1a0490fe3213d6074cc95bbb9 327 PIRSF PIRSF017020 1 326 3.9E-116 T 15-10-2018 IPR016681 Succinylglutamate desuccinylase GO:0008270|GO:0009017|GO:0019544|GO:0019545 KEGG: 00330+3.5.1.96 AM378_09015 b2c1c1c1a0490fe3213d6074cc95bbb9 327 Gene3D G3DSA:3.40.630.10 2 326 8.3E-113 T 15-10-2018 AM378_09015 b2c1c1c1a0490fe3213d6074cc95bbb9 327 Hamap MF_00767 Succinylglutamate desuccinylase [astE]. 1 327 144.04 T 15-10-2018 IPR016681 Succinylglutamate desuccinylase GO:0008270|GO:0009017|GO:0019544|GO:0019545 KEGG: 00330+3.5.1.96 AM378_01820 001ef6ce332c2cc05aaafe58d406980b 341 Pfam PF00005 ABC transporter 21 169 5.4E-34 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM378_01820 001ef6ce332c2cc05aaafe58d406980b 341 SUPERFAMILY SSF55021 249 340 2.86E-18 T 15-10-2018 AM378_01820 001ef6ce332c2cc05aaafe58d406980b 341 Gene3D G3DSA:3.40.50.300 1 263 5.9E-84 T 15-10-2018 AM378_01820 001ef6ce332c2cc05aaafe58d406980b 341 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM378_01820 001ef6ce332c2cc05aaafe58d406980b 341 SMART SM00382 30 218 2.2E-15 T 15-10-2018 IPR003593 AAA+ ATPase domain AM378_01820 001ef6ce332c2cc05aaafe58d406980b 341 Pfam PF09383 NIL domain 266 337 1.8E-15 T 15-10-2018 IPR018449 NIL domain AM378_01820 001ef6ce332c2cc05aaafe58d406980b 341 SUPERFAMILY SSF52540 1 240 1.1E-81 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_01820 001ef6ce332c2cc05aaafe58d406980b 341 Gene3D G3DSA:3.30.70.260 264 341 2.5E-16 T 15-10-2018 AM378_01820 001ef6ce332c2cc05aaafe58d406980b 341 SMART SM00930 263 338 1.3E-22 T 15-10-2018 IPR018449 NIL domain AM378_09505 785b0311405d69a74851d95064dedd20 494 Gene3D G3DSA:1.20.1730.10 24 493 2.4E-91 T 15-10-2018 IPR038377 Sodium/glucose symporter superfamily AM378_09505 785b0311405d69a74851d95064dedd20 494 TIGRFAM TIGR02121 Na_Pro_sym: sodium/proline symporter 6 491 9.1E-228 T 15-10-2018 IPR011851 Sodium/proline symporter GO:0005298|GO:0006814|GO:0015824|GO:0016021|GO:0031402 AM378_09505 785b0311405d69a74851d95064dedd20 494 Pfam PF00474 Sodium:solute symporter family 35 437 3.2E-141 T 15-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 AM378_09505 785b0311405d69a74851d95064dedd20 494 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 35 437 2.6E-125 T 15-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 AM378_09505 785b0311405d69a74851d95064dedd20 494 ProSitePatterns PS00456 Sodium:solute symporter family signature 1. 157 182 - T 15-10-2018 IPR018212 Sodium/solute symporter, conserved site AM378_09505 785b0311405d69a74851d95064dedd20 494 ProSitePatterns PS00457 Sodium:solute symporter family signature 2. 419 439 - T 15-10-2018 IPR018212 Sodium/solute symporter, conserved site AM378_21860 d2c5ead9ed2b3ddca102c64f1c4021c3 263 SMART SM00382 37 220 1.6E-16 T 15-10-2018 IPR003593 AAA+ ATPase domain AM378_21860 d2c5ead9ed2b3ddca102c64f1c4021c3 263 Gene3D G3DSA:3.40.50.300 5 260 2.5E-61 T 15-10-2018 AM378_21860 d2c5ead9ed2b3ddca102c64f1c4021c3 263 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM378_21860 d2c5ead9ed2b3ddca102c64f1c4021c3 263 Pfam PF00005 ABC transporter 28 167 9.9E-30 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM378_21860 d2c5ead9ed2b3ddca102c64f1c4021c3 263 SUPERFAMILY SSF52540 14 223 4.87E-64 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_03415 9332c07ad4f116b2d4bdaee16203dbf3 1196 Pfam PF13491 4TM region of DNA translocase FtsK/SpoIIIE 20 191 2.2E-43 T 15-10-2018 IPR025199 DNA translocase FtsK, 4TM region AM378_03415 9332c07ad4f116b2d4bdaee16203dbf3 1196 Pfam PF09397 Ftsk gamma domain 1131 1191 4.4E-28 T 15-10-2018 IPR018541 FtsK gamma domain AM378_03415 9332c07ad4f116b2d4bdaee16203dbf3 1196 Gene3D G3DSA:3.40.50.300 810 1112 1.5E-122 T 15-10-2018 AM378_03415 9332c07ad4f116b2d4bdaee16203dbf3 1196 Pfam PF01580 FtsK/SpoIIIE family 813 1026 4.9E-72 T 15-10-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 AM378_03415 9332c07ad4f116b2d4bdaee16203dbf3 1196 SUPERFAMILY SSF52540 787 1099 1.23E-52 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_03415 9332c07ad4f116b2d4bdaee16203dbf3 1196 Gene3D G3DSA:3.30.980.40 705 809 7.0E-34 T 15-10-2018 AM378_03415 9332c07ad4f116b2d4bdaee16203dbf3 1196 SMART SM00843 1129 1194 4.8E-41 T 15-10-2018 IPR018541 FtsK gamma domain AM378_03415 9332c07ad4f116b2d4bdaee16203dbf3 1196 SUPERFAMILY SSF46785 1129 1193 3.9E-22 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM378_03415 9332c07ad4f116b2d4bdaee16203dbf3 1196 Gene3D G3DSA:1.10.10.10 1133 1196 3.6E-30 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_14000 a398402cc9479d98102d9876abc776d9 323 SUPERFAMILY SSF52151 5 312 1.15E-30 T 15-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase AM378_14000 a398402cc9479d98102d9876abc776d9 323 Gene3D G3DSA:3.40.1090.20 4 103 2.1E-25 T 15-10-2018 AM378_14000 a398402cc9479d98102d9876abc776d9 323 Gene3D G3DSA:3.40.1090.20 104 218 2.6E-20 T 15-10-2018 AM378_14000 a398402cc9479d98102d9876abc776d9 323 Pfam PF01734 Patatin-like phospholipase 8 201 7.9E-24 T 15-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 AM378_19360 3603df34090e488a50e385e985552a03 246 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 44 223 6.4E-21 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AM378_19360 3603df34090e488a50e385e985552a03 246 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 25 116 9.5E-17 T 15-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 AM378_19360 3603df34090e488a50e385e985552a03 246 Gene3D G3DSA:1.10.3720.10 21 226 2.4E-46 T 15-10-2018 IPR035906 MetI-like superfamily AM378_19360 3603df34090e488a50e385e985552a03 246 SUPERFAMILY SSF161098 22 212 1.96E-41 T 15-10-2018 IPR035906 MetI-like superfamily AM378_07570 81d546feed0d165d94c29fdb98460ed2 240 SUPERFAMILY SSF51735 9 237 2.78E-42 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily AM378_07570 81d546feed0d165d94c29fdb98460ed2 240 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 236 1.8E-28 T 15-10-2018 AM378_07570 81d546feed0d165d94c29fdb98460ed2 240 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 3.0E-14 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_07570 81d546feed0d165d94c29fdb98460ed2 240 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 172 189 3.0E-14 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_07570 81d546feed0d165d94c29fdb98460ed2 240 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 3.0E-14 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_07570 81d546feed0d165d94c29fdb98460ed2 240 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 77 88 3.0E-14 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_07570 81d546feed0d165d94c29fdb98460ed2 240 Gene3D G3DSA:3.40.50.720 7 238 3.5E-51 T 15-10-2018 AM378_07570 81d546feed0d165d94c29fdb98460ed2 240 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 139 167 - T 15-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AM378_17900 c5e58e799082ed22bfcf62d8ab154eeb 456 SUPERFAMILY SSF55874 292 440 8.12E-31 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AM378_17900 c5e58e799082ed22bfcf62d8ab154eeb 456 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 338 438 2.6E-17 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AM378_17900 c5e58e799082ed22bfcf62d8ab154eeb 456 Gene3D G3DSA:1.10.287.130 178 288 4.0E-22 T 15-10-2018 AM378_17900 c5e58e799082ed22bfcf62d8ab154eeb 456 Pfam PF00512 His Kinase A (phospho-acceptor) domain 235 289 6.0E-10 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM378_17900 c5e58e799082ed22bfcf62d8ab154eeb 456 SMART SM00304 180 232 5.3E-6 T 15-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AM378_17900 c5e58e799082ed22bfcf62d8ab154eeb 456 Gene3D G3DSA:3.30.565.10 294 449 1.7E-36 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AM378_17900 c5e58e799082ed22bfcf62d8ab154eeb 456 PRINTS PR00344 Bacterial sensor protein C-terminal signature 400 418 2.1E-10 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM378_17900 c5e58e799082ed22bfcf62d8ab154eeb 456 PRINTS PR00344 Bacterial sensor protein C-terminal signature 385 395 2.1E-10 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM378_17900 c5e58e799082ed22bfcf62d8ab154eeb 456 PRINTS PR00344 Bacterial sensor protein C-terminal signature 367 381 2.1E-10 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM378_17900 c5e58e799082ed22bfcf62d8ab154eeb 456 SMART SM00388 233 293 7.8E-12 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM378_17900 c5e58e799082ed22bfcf62d8ab154eeb 456 SUPERFAMILY SSF47384 217 291 1.18E-11 T 15-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AM378_17900 c5e58e799082ed22bfcf62d8ab154eeb 456 SMART SM00387 332 440 1.4E-26 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AM378_17900 c5e58e799082ed22bfcf62d8ab154eeb 456 Pfam PF00672 HAMP domain 182 225 1.0E-7 T 15-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AM378_19555 249060494763bf08cf385a5e0e3f9c36 305 SUPERFAMILY SSF55681 8 292 6.84E-135 T 15-10-2018 AM378_19555 249060494763bf08cf385a5e0e3f9c36 305 Pfam PF02091 Glycyl-tRNA synthetase alpha subunit 9 292 4.4E-150 T 15-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AM378_19555 249060494763bf08cf385a5e0e3f9c36 305 TIGRFAM TIGR00388 glyQ: glycine--tRNA ligase, alpha subunit 7 301 4.0E-176 T 15-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AM378_19555 249060494763bf08cf385a5e0e3f9c36 305 Gene3D G3DSA:3.30.930.10 1 214 4.4E-111 T 15-10-2018 AM378_19555 249060494763bf08cf385a5e0e3f9c36 305 Hamap MF_00254 Glycine--tRNA ligase alpha subunit [glyQ]. 7 293 62.659 T 15-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AM378_19555 249060494763bf08cf385a5e0e3f9c36 305 Gene3D G3DSA:1.20.58.180 215 297 3.6E-34 T 15-10-2018 AM378_19555 249060494763bf08cf385a5e0e3f9c36 305 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 82 102 4.3E-71 T 15-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AM378_19555 249060494763bf08cf385a5e0e3f9c36 305 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 139 159 4.3E-71 T 15-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AM378_19555 249060494763bf08cf385a5e0e3f9c36 305 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 162 177 4.3E-71 T 15-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AM378_19555 249060494763bf08cf385a5e0e3f9c36 305 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 113 137 4.3E-71 T 15-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AM378_19555 249060494763bf08cf385a5e0e3f9c36 305 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 253 269 4.3E-71 T 15-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AM378_19555 249060494763bf08cf385a5e0e3f9c36 305 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 61 76 4.3E-71 T 15-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AM378_16950 6649656d07c18d8fd71550655035d3ff 231 SUPERFAMILY SSF52317 3 228 5.94E-41 T 15-10-2018 IPR029062 Class I glutamine amidotransferase-like AM378_16950 6649656d07c18d8fd71550655035d3ff 231 Gene3D G3DSA:3.40.50.880 1 231 1.4E-49 T 15-10-2018 IPR029062 Class I glutamine amidotransferase-like AM378_16950 6649656d07c18d8fd71550655035d3ff 231 Pfam PF00117 Glutamine amidotransferase class-I 30 201 2.8E-13 T 15-10-2018 IPR017926 Glutamine amidotransferase AM378_19590 f423768b776d1cfb247dc31a9b5b65ec 381 ProSitePatterns PS00974 Mannitol dehydrogenases signature. 150 162 - T 15-10-2018 IPR023027 Mannitol dehydrogenase, conserved site GO:0019594|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 AM378_19590 f423768b776d1cfb247dc31a9b5b65ec 381 Gene3D G3DSA:3.40.50.720 1 203 5.9E-83 T 15-10-2018 AM378_19590 f423768b776d1cfb247dc31a9b5b65ec 381 Hamap MF_00196 Mannitol-1-phosphate 5-dehydrogenase [mtlD]. 1 376 41.371 T 15-10-2018 IPR023028 Mannitol-1-phosphate 5-dehydrogenase GO:0008926|GO:0019594|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 AM378_19590 f423768b776d1cfb247dc31a9b5b65ec 381 Pfam PF08125 Mannitol dehydrogenase C-terminal domain 148 371 3.2E-65 T 15-10-2018 IPR013118 Mannitol dehydrogenase, C-terminal GO:0016491|GO:0050662|GO:0055114 AM378_19590 f423768b776d1cfb247dc31a9b5b65ec 381 SUPERFAMILY SSF48179 202 380 5.1E-46 T 15-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 AM378_19590 f423768b776d1cfb247dc31a9b5b65ec 381 Pfam PF01232 Mannitol dehydrogenase Rossmann domain 1 123 7.9E-25 T 15-10-2018 IPR013131 Mannitol dehydrogenase, N-terminal GO:0016491|GO:0055114 AM378_19590 f423768b776d1cfb247dc31a9b5b65ec 381 Gene3D G3DSA:1.10.1040.10 205 380 8.8E-71 T 15-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AM378_19590 f423768b776d1cfb247dc31a9b5b65ec 381 PRINTS PR00084 Mannitol dehydrogenase signature 3 13 9.7E-18 T 15-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 AM378_19590 f423768b776d1cfb247dc31a9b5b65ec 381 PRINTS PR00084 Mannitol dehydrogenase signature 114 127 9.7E-18 T 15-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 AM378_19590 f423768b776d1cfb247dc31a9b5b65ec 381 PRINTS PR00084 Mannitol dehydrogenase signature 168 183 9.7E-18 T 15-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 AM378_19590 f423768b776d1cfb247dc31a9b5b65ec 381 PRINTS PR00084 Mannitol dehydrogenase signature 150 163 9.7E-18 T 15-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 AM378_19590 f423768b776d1cfb247dc31a9b5b65ec 381 SUPERFAMILY SSF51735 1 201 6.98E-48 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily AM378_08060 30631e0b3433bf781997bb815cfdef22 196 SUPERFAMILY SSF52540 7 196 2.25E-75 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_08060 30631e0b3433bf781997bb815cfdef22 196 Pfam PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP 28 196 5.1E-59 T 15-10-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17 AM378_08060 30631e0b3433bf781997bb815cfdef22 196 Gene3D G3DSA:3.40.50.300 6 196 3.3E-72 T 15-10-2018 AM378_08060 30631e0b3433bf781997bb815cfdef22 196 Pfam PF12557 Cob(I)alamin adenosyltransferase N terminal 3 21 5.8E-6 T 15-10-2018 IPR025826 Cob(I)alamin adenosyltransferase N-terminal domain KEGG: 00860+2.5.1.17 AM378_08060 30631e0b3433bf781997bb815cfdef22 196 PIRSF PIRSF015617 2 196 6.4E-68 T 15-10-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17 AM378_08060 30631e0b3433bf781997bb815cfdef22 196 TIGRFAM TIGR00708 cobA: cob(I)yrinic acid a,c-diamide adenosyltransferase 24 196 1.2E-78 T 15-10-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17 AM378_06225 f9ae826ca77253d4fabfc99e982540f2 108 Pfam PF02694 Uncharacterised BCR, YnfA/UPF0060 family 1 107 1.7E-42 T 15-10-2018 IPR003844 Uncharacterised protein family UPF0060 GO:0016020 AM378_06225 f9ae826ca77253d4fabfc99e982540f2 108 Hamap MF_00010 UPF0060 membrane protein YnfA [ynfA]. 2 106 22.345 T 15-10-2018 IPR003844 Uncharacterised protein family UPF0060 GO:0016020 AM378_06225 f9ae826ca77253d4fabfc99e982540f2 108 SUPERFAMILY SSF103481 8 105 8.63E-5 T 15-10-2018 AM378_18100 5cb9d95853106d9242d94c0b24b68ada 393 Pfam PF03576 Peptidase family S58 58 384 8.9E-66 T 15-10-2018 IPR005321 Peptidase S58, DmpA AM378_18100 5cb9d95853106d9242d94c0b24b68ada 393 SUPERFAMILY SSF56266 51 383 3.66E-62 T 15-10-2018 IPR016117 ArgJ-like domain superfamily KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 AM378_18100 5cb9d95853106d9242d94c0b24b68ada 393 Gene3D G3DSA:3.60.70.12 51 391 1.8E-101 T 15-10-2018 IPR016117 ArgJ-like domain superfamily KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 AM378_10285 59b9fe24e443f8f254216220475bc60c 65 Pfam PF05957 Bacterial protein of unknown function (DUF883) 14 65 3.4E-10 T 15-10-2018 IPR010279 Inner membrane protein YqjD/ElaB GO:0043022 AM378_22340 ec2f8918493691e01ac5ca2359af5d38 243 Gene3D G3DSA:3.40.50.1580 1 242 3.6E-74 T 15-10-2018 AM378_22340 ec2f8918493691e01ac5ca2359af5d38 243 TIGRFAM TIGR00107 deoD: purine nucleoside phosphorylase 5 238 2.0E-118 T 15-10-2018 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 AM378_22340 ec2f8918493691e01ac5ca2359af5d38 243 ProSitePatterns PS01232 Purine and other phosphorylases family 1 signature. 62 77 - T 15-10-2018 IPR018016 Nucleoside phosphorylase, conserved site GO:0016763 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-73614|Reactome: R-HSA-73621 AM378_22340 ec2f8918493691e01ac5ca2359af5d38 243 Hamap MF_01627 Purine nucleoside phosphorylase DeoD-type [deoD]. 2 239 50.469 T 15-10-2018 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 AM378_22340 ec2f8918493691e01ac5ca2359af5d38 243 Pfam PF01048 Phosphorylase superfamily 15 218 1.2E-36 T 15-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 AM378_22340 ec2f8918493691e01ac5ca2359af5d38 243 SUPERFAMILY SSF53167 3 238 3.53E-90 T 15-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 AM378_09855 4579d92d0583f053a325f9f9364f2fa5 215 PIRSF PIRSF015592 1 213 1.5E-77 T 15-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 AM378_09855 4579d92d0583f053a325f9f9364f2fa5 215 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 132 148 2.1E-40 T 15-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 AM378_09855 4579d92d0583f053a325f9f9364f2fa5 215 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 4 27 2.1E-40 T 15-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 AM378_09855 4579d92d0583f053a325f9f9364f2fa5 215 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 62 74 2.1E-40 T 15-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 AM378_09855 4579d92d0583f053a325f9f9364f2fa5 215 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 80 100 2.1E-40 T 15-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 AM378_09855 4579d92d0583f053a325f9f9364f2fa5 215 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 162 174 2.1E-40 T 15-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 AM378_09855 4579d92d0583f053a325f9f9364f2fa5 215 ProSitePatterns PS01333 Pyrrolidone-carboxylate peptidase glutamic acid active site. 69 85 - T 15-10-2018 IPR033693 Pyroglutamyl peptidase I, Glu active site MetaCyc: PWY-7942 AM378_09855 4579d92d0583f053a325f9f9364f2fa5 215 TIGRFAM TIGR00504 pyro_pdase: pyroglutamyl-peptidase I 3 212 1.2E-75 T 15-10-2018 IPR029762 Pyroglutamyl peptidase I, bacterial-type GO:0005829|GO:0006508|GO:0008234|GO:0016920 MetaCyc: PWY-7942 AM378_09855 4579d92d0583f053a325f9f9364f2fa5 215 SUPERFAMILY SSF53182 1 213 1.14E-68 T 15-10-2018 IPR036440 Peptidase C15, pyroglutamyl peptidase I-like superfamily MetaCyc: PWY-7942 AM378_09855 4579d92d0583f053a325f9f9364f2fa5 215 ProSitePatterns PS01334 Pyrrolidone-carboxylate peptidase cysteine active site. 130 144 - T 15-10-2018 IPR033694 Pyroglutamyl peptidase I, Cys active site MetaCyc: PWY-7942 AM378_09855 4579d92d0583f053a325f9f9364f2fa5 215 Pfam PF01470 Pyroglutamyl peptidase 3 201 1.7E-71 T 15-10-2018 IPR016125 Peptidase C15, pyroglutamyl peptidase I-like MetaCyc: PWY-7942 AM378_09855 4579d92d0583f053a325f9f9364f2fa5 215 Hamap MF_00417 Pyrrolidone-carboxylate peptidase [pcp]. 2 201 37.454 T 15-10-2018 IPR029762 Pyroglutamyl peptidase I, bacterial-type GO:0005829|GO:0006508|GO:0008234|GO:0016920 MetaCyc: PWY-7942 AM378_09855 4579d92d0583f053a325f9f9364f2fa5 215 Gene3D G3DSA:3.40.630.20 1 215 3.6E-76 T 15-10-2018 IPR036440 Peptidase C15, pyroglutamyl peptidase I-like superfamily MetaCyc: PWY-7942 AM378_09605 27eeeec4c5298ea1c7abcc53a75bb70a 570 Pfam PF08345 Flagellar M-ring protein C-terminal 255 449 7.7E-52 T 15-10-2018 IPR013556 Flagellar M-ring C-terminal AM378_09605 27eeeec4c5298ea1c7abcc53a75bb70a 570 PIRSF PIRSF004862 6 570 4.0E-165 T 15-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 AM378_09605 27eeeec4c5298ea1c7abcc53a75bb70a 570 PRINTS PR01009 Flagellar M-ring protein signature 124 142 6.0E-44 T 15-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 AM378_09605 27eeeec4c5298ea1c7abcc53a75bb70a 570 PRINTS PR01009 Flagellar M-ring protein signature 199 217 6.0E-44 T 15-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 AM378_09605 27eeeec4c5298ea1c7abcc53a75bb70a 570 PRINTS PR01009 Flagellar M-ring protein signature 156 170 6.0E-44 T 15-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 AM378_09605 27eeeec4c5298ea1c7abcc53a75bb70a 570 PRINTS PR01009 Flagellar M-ring protein signature 268 286 6.0E-44 T 15-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 AM378_09605 27eeeec4c5298ea1c7abcc53a75bb70a 570 PRINTS PR01009 Flagellar M-ring protein signature 376 400 6.0E-44 T 15-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 AM378_09605 27eeeec4c5298ea1c7abcc53a75bb70a 570 TIGRFAM TIGR00206 fliF: flagellar M-ring protein FliF 16 569 1.1E-175 T 15-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 AM378_09605 27eeeec4c5298ea1c7abcc53a75bb70a 570 Gene3D G3DSA:3.30.300.30 125 227 3.7E-11 T 15-10-2018 AM378_09605 27eeeec4c5298ea1c7abcc53a75bb70a 570 Pfam PF01514 Secretory protein of YscJ/FliF family 34 223 8.9E-76 T 15-10-2018 IPR006182 Secretory protein YscJ/FliF AM378_14060 8f7309b7489499c59ae140653e1b0702 483 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 13 472 4.9E-103 T 15-10-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0016020|GO:0022857|GO:0055085 AM378_14060 8f7309b7489499c59ae140653e1b0702 483 Pfam PF02321 Outer membrane efflux protein 290 470 1.6E-17 T 15-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 AM378_14060 8f7309b7489499c59ae140653e1b0702 483 Pfam PF02321 Outer membrane efflux protein 64 257 3.6E-27 T 15-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 AM378_14060 8f7309b7489499c59ae140653e1b0702 483 Gene3D G3DSA:1.20.1600.10 54 473 2.3E-108 T 15-10-2018 AM378_14060 8f7309b7489499c59ae140653e1b0702 483 SUPERFAMILY SSF56954 5 474 1.05E-91 T 15-10-2018 AM378_14060 8f7309b7489499c59ae140653e1b0702 483 Gene3D G3DSA:2.20.200.10 101 361 2.3E-108 T 15-10-2018 AM378_11630 089e5dbf2898b3444962b824b87ee149 762 ProSitePatterns PS00089 Ribonucleotide reductase large subunit signature. 599 621 - T 15-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AM378_11630 089e5dbf2898b3444962b824b87ee149 762 SUPERFAMILY SSF51998 222 740 1.53E-167 T 15-10-2018 AM378_11630 089e5dbf2898b3444962b824b87ee149 762 Pfam PF02867 Ribonucleotide reductase, barrel domain 223 731 2.8E-117 T 15-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AM378_11630 089e5dbf2898b3444962b824b87ee149 762 SUPERFAMILY SSF48168 10 221 7.46E-75 T 15-10-2018 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AM378_11630 089e5dbf2898b3444962b824b87ee149 762 PRINTS PR01183 Ribonucleotide reductase large chain signature 473 496 2.3E-39 T 15-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AM378_11630 089e5dbf2898b3444962b824b87ee149 762 PRINTS PR01183 Ribonucleotide reductase large chain signature 433 444 2.3E-39 T 15-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AM378_11630 089e5dbf2898b3444962b824b87ee149 762 PRINTS PR01183 Ribonucleotide reductase large chain signature 511 533 2.3E-39 T 15-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AM378_11630 089e5dbf2898b3444962b824b87ee149 762 PRINTS PR01183 Ribonucleotide reductase large chain signature 610 637 2.3E-39 T 15-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AM378_11630 089e5dbf2898b3444962b824b87ee149 762 PRINTS PR01183 Ribonucleotide reductase large chain signature 539 562 2.3E-39 T 15-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AM378_11630 089e5dbf2898b3444962b824b87ee149 762 PRINTS PR01183 Ribonucleotide reductase large chain signature 298 317 2.3E-39 T 15-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AM378_11630 089e5dbf2898b3444962b824b87ee149 762 Pfam PF03477 ATP cone domain 6 92 6.2E-16 T 15-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 AM378_11630 089e5dbf2898b3444962b824b87ee149 762 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 141 219 2.0E-13 T 15-10-2018 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AM378_11630 089e5dbf2898b3444962b824b87ee149 762 TIGRFAM TIGR02506 NrdE_NrdA: ribonucleoside-diphosphate reductase, alpha subunit 145 735 4.1E-180 T 15-10-2018 IPR013346 Ribonucleotide reductase, class I , alpha subunit GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AM378_11630 089e5dbf2898b3444962b824b87ee149 762 Gene3D G3DSA:3.20.70.20 78 741 8.0E-157 T 15-10-2018 AM378_05395 7799073f3dafb9ee69c13d2d51ecac6b 367 SUPERFAMILY SSF53383 6 363 8.6E-83 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM378_05395 7799073f3dafb9ee69c13d2d51ecac6b 367 Hamap MF_01376 2-aminoethylphosphonate--pyruvate transaminase [phnW]. 1 367 199.013 T 15-10-2018 IPR012703 2-aminoethylphosphonate--pyruvate transaminase GO:0019700|GO:0047304 KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832 AM378_05395 7799073f3dafb9ee69c13d2d51ecac6b 367 Gene3D G3DSA:3.40.640.10 17 263 7.7E-125 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AM378_05395 7799073f3dafb9ee69c13d2d51ecac6b 367 Pfam PF00266 Aminotransferase class-V 41 317 1.9E-25 T 15-10-2018 IPR000192 Aminotransferase class V domain AM378_05395 7799073f3dafb9ee69c13d2d51ecac6b 367 TIGRFAM TIGR03301 PhnW-AepZ: 2-aminoethylphosphonate aminotransferase 7 362 3.5E-152 T 15-10-2018 IPR012703 2-aminoethylphosphonate--pyruvate transaminase GO:0019700|GO:0047304 KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832 AM378_05395 7799073f3dafb9ee69c13d2d51ecac6b 367 PIRSF PIRSF000524 1 366 2.0E-56 T 15-10-2018 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832|Reactome: R-HSA-389661|Reactome: R-HSA-9033241 AM378_05395 7799073f3dafb9ee69c13d2d51ecac6b 367 Gene3D G3DSA:3.90.1150.10 9 354 7.7E-125 T 15-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AM378_05395 7799073f3dafb9ee69c13d2d51ecac6b 367 TIGRFAM TIGR02326 transamin_PhnW: 2-aminoethylphosphonate--pyruvate transaminase 4 365 8.2E-187 T 15-10-2018 IPR012703 2-aminoethylphosphonate--pyruvate transaminase GO:0019700|GO:0047304 KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832 AM378_10040 64f62c85ff0ae1fb9f3e8f030816dc99 445 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 124 142 8.3E-26 T 15-10-2018 AM378_10040 64f62c85ff0ae1fb9f3e8f030816dc99 445 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 8.3E-26 T 15-10-2018 AM378_10040 64f62c85ff0ae1fb9f3e8f030816dc99 445 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 276 298 8.3E-26 T 15-10-2018 AM378_10040 64f62c85ff0ae1fb9f3e8f030816dc99 445 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 164 182 8.3E-26 T 15-10-2018 AM378_10040 64f62c85ff0ae1fb9f3e8f030816dc99 445 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 247 263 8.3E-26 T 15-10-2018 AM378_10040 64f62c85ff0ae1fb9f3e8f030816dc99 445 Gene3D G3DSA:3.30.390.30 331 442 6.3E-31 T 15-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 AM378_10040 64f62c85ff0ae1fb9f3e8f030816dc99 445 SUPERFAMILY SSF55424 328 441 1.01E-31 T 15-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 AM378_10040 64f62c85ff0ae1fb9f3e8f030816dc99 445 Gene3D G3DSA:3.50.50.60 7 308 1.5E-87 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AM378_10040 64f62c85ff0ae1fb9f3e8f030816dc99 445 PIRSF PIRSF000350 1 441 1.6E-86 T 15-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 AM378_10040 64f62c85ff0ae1fb9f3e8f030816dc99 445 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 303 5.3E-54 T 15-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM378_10040 64f62c85ff0ae1fb9f3e8f030816dc99 445 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 332 438 2.1E-26 T 15-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 AM378_10040 64f62c85ff0ae1fb9f3e8f030816dc99 445 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 393 408 1.8E-47 T 15-10-2018 AM378_10040 64f62c85ff0ae1fb9f3e8f030816dc99 445 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 127 136 1.8E-47 T 15-10-2018 AM378_10040 64f62c85ff0ae1fb9f3e8f030816dc99 445 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 5 27 1.8E-47 T 15-10-2018 AM378_10040 64f62c85ff0ae1fb9f3e8f030816dc99 445 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 164 189 1.8E-47 T 15-10-2018 AM378_10040 64f62c85ff0ae1fb9f3e8f030816dc99 445 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 291 298 1.8E-47 T 15-10-2018 AM378_10040 64f62c85ff0ae1fb9f3e8f030816dc99 445 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 328 349 1.8E-47 T 15-10-2018 AM378_10040 64f62c85ff0ae1fb9f3e8f030816dc99 445 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 415 435 1.8E-47 T 15-10-2018 AM378_10040 64f62c85ff0ae1fb9f3e8f030816dc99 445 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 39 54 1.8E-47 T 15-10-2018 AM378_10040 64f62c85ff0ae1fb9f3e8f030816dc99 445 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 248 262 1.8E-47 T 15-10-2018 AM378_10040 64f62c85ff0ae1fb9f3e8f030816dc99 445 Gene3D G3DSA:3.50.50.60 136 254 1.5E-87 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AM378_10040 64f62c85ff0ae1fb9f3e8f030816dc99 445 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 40 50 - T 15-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 AM378_10040 64f62c85ff0ae1fb9f3e8f030816dc99 445 SUPERFAMILY SSF51905 2 358 1.65E-48 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AM378_13320 4296c33e19026efea934c489f42a06ac 206 PIRSF PIRSF006170 1 206 7.9E-57 T 15-10-2018 IPR026039 Uncharacterised protein family UPF0070 AM378_13320 4296c33e19026efea934c489f42a06ac 206 SUPERFAMILY SSF48452 89 191 1.21E-5 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AM378_13320 4296c33e19026efea934c489f42a06ac 206 Pfam PF09976 Tetratricopeptide repeat-like domain 15 205 8.7E-58 T 15-10-2018 IPR018704 Tetratricopeptide repeat-like domain Reactome: R-HSA-192823|Reactome: R-HSA-381038|Reactome: R-HSA-381426|Reactome: R-HSA-6798695|Reactome: R-HSA-8957275 AM378_13320 4296c33e19026efea934c489f42a06ac 206 Gene3D G3DSA:1.25.40.10 89 205 1.2E-5 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AM378_03700 2f73d615c7d2b5fd50186b6b74fac67b 582 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 460 479 3.9E-10 T 15-10-2018 AM378_03700 2f73d615c7d2b5fd50186b6b74fac67b 582 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 430 449 3.9E-10 T 15-10-2018 AM378_03700 2f73d615c7d2b5fd50186b6b74fac67b 582 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 347 363 3.9E-10 T 15-10-2018 AM378_03700 2f73d615c7d2b5fd50186b6b74fac67b 582 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 490 508 3.9E-10 T 15-10-2018 AM378_03700 2f73d615c7d2b5fd50186b6b74fac67b 582 Gene3D G3DSA:3.40.50.300 115 234 9.9E-14 T 15-10-2018 AM378_03700 2f73d615c7d2b5fd50186b6b74fac67b 582 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 433 529 1.8E-9 T 15-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 AM378_03700 2f73d615c7d2b5fd50186b6b74fac67b 582 Pfam PF13654 AAA domain 139 321 1.8E-23 T 15-10-2018 AM378_03700 2f73d615c7d2b5fd50186b6b74fac67b 582 Gene3D G3DSA:3.30.230.10 323 565 4.2E-94 T 15-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AM378_03700 2f73d615c7d2b5fd50186b6b74fac67b 582 SUPERFAMILY SSF54211 347 538 7.59E-34 T 15-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AM378_08235 6bd68cafa94707bd66b82a3efd5d53c1 163 Pfam PF00210 Ferritin-like domain 24 163 5.2E-28 T 15-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 AM378_08235 6bd68cafa94707bd66b82a3efd5d53c1 163 PIRSF PIRSF005900 1 163 1.8E-48 T 15-10-2018 IPR002177 DNA-binding protein Dps AM378_08235 6bd68cafa94707bd66b82a3efd5d53c1 163 ProSitePatterns PS00818 Dps protein family signature 1. 44 60 - T 15-10-2018 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 AM378_08235 6bd68cafa94707bd66b82a3efd5d53c1 163 Gene3D G3DSA:1.20.1260.10 4 161 5.5E-57 T 15-10-2018 IPR012347 Ferritin-like AM378_08235 6bd68cafa94707bd66b82a3efd5d53c1 163 SUPERFAMILY SSF47240 7 163 1.91E-47 T 15-10-2018 IPR009078 Ferritin-like superfamily AM378_08235 6bd68cafa94707bd66b82a3efd5d53c1 163 ProSitePatterns PS00819 Dps protein family signature 2. 70 84 - T 15-10-2018 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 AM378_08235 6bd68cafa94707bd66b82a3efd5d53c1 163 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 44 60 5.5E-15 T 15-10-2018 IPR002177 DNA-binding protein Dps AM378_08235 6bd68cafa94707bd66b82a3efd5d53c1 163 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 68 84 5.5E-15 T 15-10-2018 IPR002177 DNA-binding protein Dps AM378_08235 6bd68cafa94707bd66b82a3efd5d53c1 163 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 139 157 5.5E-15 T 15-10-2018 IPR002177 DNA-binding protein Dps AM378_01350 5dd44b2074e4c8ee1bfb8e93124e21fa 327 TIGRFAM TIGR02666 moaA: molybdenum cofactor biosynthesis protein A 4 327 1.6E-105 T 15-10-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AM378_01350 5dd44b2074e4c8ee1bfb8e93124e21fa 327 Pfam PF04055 Radical SAM superfamily 18 179 2.8E-29 T 15-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AM378_01350 5dd44b2074e4c8ee1bfb8e93124e21fa 327 Gene3D G3DSA:3.20.20.70 1 327 5.0E-82 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM378_01350 5dd44b2074e4c8ee1bfb8e93124e21fa 327 ProSitePatterns PS01305 moaA / nifB / pqqE family signature. 19 30 - T 15-10-2018 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO:0003824|GO:0046872|GO:0051539 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AM378_01350 5dd44b2074e4c8ee1bfb8e93124e21fa 327 SUPERFAMILY SSF102114 4 276 5.1E-72 T 15-10-2018 AM378_01350 5dd44b2074e4c8ee1bfb8e93124e21fa 327 Pfam PF13353 4Fe-4S single cluster domain 22 123 5.9E-7 T 15-10-2018 AM378_01350 5dd44b2074e4c8ee1bfb8e93124e21fa 327 Hamap MF_01225_B GTP 3',8-cyclase [moaA]. 4 327 37.654 T 15-10-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AM378_01350 5dd44b2074e4c8ee1bfb8e93124e21fa 327 Pfam PF06463 Molybdenum Cofactor Synthesis C 184 310 1.3E-37 T 15-10-2018 IPR010505 Molybdenum cofactor synthesis C-terminal GO:0006777|GO:0019008|GO:0051539 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AM378_01350 5dd44b2074e4c8ee1bfb8e93124e21fa 327 SMART SM00729 13 217 2.1E-6 T 15-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 AM378_03300 07875364b6f7f84e43e9882750f306e5 479 Pfam PF11066 Protein of unknown function (DUF2867) 332 463 1.7E-14 T 15-10-2018 IPR021295 Protein of unknown function DUF2867 AM378_03300 07875364b6f7f84e43e9882750f306e5 479 Gene3D G3DSA:3.40.50.720 5 301 4.5E-37 T 15-10-2018 AM378_03300 07875364b6f7f84e43e9882750f306e5 479 SUPERFAMILY SSF51735 1 294 8.56E-48 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily AM378_03300 07875364b6f7f84e43e9882750f306e5 479 Pfam PF13460 NAD(P)H-binding 10 151 1.5E-14 T 15-10-2018 IPR016040 NAD(P)-binding domain AM378_07390 78ac2f222fe7150c34f36fa3a94dc8e3 310 Pfam PF03466 LysR substrate binding domain 102 303 1.7E-29 T 15-10-2018 IPR005119 LysR, substrate-binding AM378_07390 78ac2f222fe7150c34f36fa3a94dc8e3 310 SUPERFAMILY SSF53850 104 305 2.9E-35 T 15-10-2018 AM378_07390 78ac2f222fe7150c34f36fa3a94dc8e3 310 Gene3D G3DSA:3.40.190.10 174 272 2.9E-48 T 15-10-2018 AM378_07390 78ac2f222fe7150c34f36fa3a94dc8e3 310 Gene3D G3DSA:3.40.190.10 115 299 2.9E-48 T 15-10-2018 AM378_07390 78ac2f222fe7150c34f36fa3a94dc8e3 310 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 20 78 1.2E-17 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_07390 78ac2f222fe7150c34f36fa3a94dc8e3 310 SUPERFAMILY SSF46785 20 125 3.41E-20 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM378_07390 78ac2f222fe7150c34f36fa3a94dc8e3 310 Gene3D G3DSA:1.10.10.10 19 108 3.1E-20 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_11320 1b0b55d4070b6ee65a5e31c726c8da0b 288 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 1.1E-5 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_11320 1b0b55d4070b6ee65a5e31c726c8da0b 288 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 1.1E-5 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_11320 1b0b55d4070b6ee65a5e31c726c8da0b 288 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 1.1E-5 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_11320 1b0b55d4070b6ee65a5e31c726c8da0b 288 SUPERFAMILY SSF53850 89 286 9.38E-50 T 15-10-2018 AM378_11320 1b0b55d4070b6ee65a5e31c726c8da0b 288 Gene3D G3DSA:3.40.190.290 89 287 3.7E-50 T 15-10-2018 AM378_11320 1b0b55d4070b6ee65a5e31c726c8da0b 288 SUPERFAMILY SSF46785 2 109 3.27E-19 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM378_11320 1b0b55d4070b6ee65a5e31c726c8da0b 288 Pfam PF03466 LysR substrate binding domain 87 286 4.3E-53 T 15-10-2018 IPR005119 LysR, substrate-binding AM378_11320 1b0b55d4070b6ee65a5e31c726c8da0b 288 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 2.5E-15 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_11320 1b0b55d4070b6ee65a5e31c726c8da0b 288 Gene3D G3DSA:1.10.10.10 1 84 4.3E-20 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_18320 7f79ea6d92a1ddb8fbfc48e5cad7a6c5 193 Gene3D G3DSA:1.20.58.320 13 93 7.6E-28 T 15-10-2018 AM378_18320 7f79ea6d92a1ddb8fbfc48e5cad7a6c5 193 Pfam PF06041 Bacterial protein of unknown function (DUF924) 22 190 2.8E-51 T 15-10-2018 IPR010323 Protein of unknown function DUF924 AM378_18320 7f79ea6d92a1ddb8fbfc48e5cad7a6c5 193 SUPERFAMILY SSF48452 17 189 3.79E-60 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AM378_18320 7f79ea6d92a1ddb8fbfc48e5cad7a6c5 193 Gene3D G3DSA:1.25.40.10 94 193 2.0E-31 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AM378_19725 677e748f0ea60de85f30e54b2c2040af 211 Pfam PF01909 Nucleotidyltransferase domain 106 135 2.3E-6 T 15-10-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 AM378_19725 677e748f0ea60de85f30e54b2c2040af 211 Gene3D G3DSA:1.10.10.10 2 89 3.5E-8 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_19725 677e748f0ea60de85f30e54b2c2040af 211 SUPERFAMILY SSF81301 95 185 1.41E-14 T 15-10-2018 AM378_19725 677e748f0ea60de85f30e54b2c2040af 211 Gene3D G3DSA:3.30.460.10 92 178 3.0E-14 T 15-10-2018 AM378_19725 677e748f0ea60de85f30e54b2c2040af 211 SUPERFAMILY SSF46785 4 79 5.3E-10 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM378_14095 97a5b24553a0fda136ad68add6946c31 452 Pfam PF13091 PLD-like domain 258 400 5.7E-20 T 15-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 AM378_14095 97a5b24553a0fda136ad68add6946c31 452 SUPERFAMILY SSF56024 11 211 2.32E-27 T 15-10-2018 AM378_14095 97a5b24553a0fda136ad68add6946c31 452 Gene3D G3DSA:3.30.870.10 19 448 1.5E-175 T 15-10-2018 AM378_14095 97a5b24553a0fda136ad68add6946c31 452 SUPERFAMILY SSF56024 254 394 1.66E-16 T 15-10-2018 AM378_14095 97a5b24553a0fda136ad68add6946c31 452 PIRSF PIRSF000850 1 452 1.2E-249 T 15-10-2018 AM378_14095 97a5b24553a0fda136ad68add6946c31 452 SMART SM00155 134 160 0.0056 T 15-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 AM378_14095 97a5b24553a0fda136ad68add6946c31 452 SMART SM00155 353 380 0.0012 T 15-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 AM378_14095 97a5b24553a0fda136ad68add6946c31 452 Gene3D G3DSA:3.30.870.10 25 233 1.5E-175 T 15-10-2018 AM378_02915 eb9f3fdd0ee06301145c5d778f879931 435 ProSitePatterns PS00611 Histidinol dehydrogenase signature. 231 263 - T 15-10-2018 IPR001692 Histidinol dehydrogenase, conserved site GO:0000105|GO:0004399|GO:0055114 KEGG: 00340+1.1.1.23 AM378_02915 eb9f3fdd0ee06301145c5d778f879931 435 Gene3D G3DSA:3.40.50.1980 235 350 1.3E-120 T 15-10-2018 AM378_02915 eb9f3fdd0ee06301145c5d778f879931 435 Gene3D G3DSA:3.40.50.1980 34 233 1.3E-120 T 15-10-2018 AM378_02915 eb9f3fdd0ee06301145c5d778f879931 435 Hamap MF_01024 Histidinol dehydrogenase [hisD]. 8 428 40.451 T 15-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AM378_02915 eb9f3fdd0ee06301145c5d778f879931 435 PRINTS PR00083 Histidinol dehydrogenase signature 110 137 1.2E-98 T 15-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AM378_02915 eb9f3fdd0ee06301145c5d778f879931 435 PRINTS PR00083 Histidinol dehydrogenase signature 37 61 1.2E-98 T 15-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AM378_02915 eb9f3fdd0ee06301145c5d778f879931 435 PRINTS PR00083 Histidinol dehydrogenase signature 199 224 1.2E-98 T 15-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AM378_02915 eb9f3fdd0ee06301145c5d778f879931 435 PRINTS PR00083 Histidinol dehydrogenase signature 253 272 1.2E-98 T 15-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AM378_02915 eb9f3fdd0ee06301145c5d778f879931 435 PRINTS PR00083 Histidinol dehydrogenase signature 362 380 1.2E-98 T 15-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AM378_02915 eb9f3fdd0ee06301145c5d778f879931 435 PRINTS PR00083 Histidinol dehydrogenase signature 321 346 1.2E-98 T 15-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AM378_02915 eb9f3fdd0ee06301145c5d778f879931 435 PRINTS PR00083 Histidinol dehydrogenase signature 169 195 1.2E-98 T 15-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AM378_02915 eb9f3fdd0ee06301145c5d778f879931 435 PRINTS PR00083 Histidinol dehydrogenase signature 231 252 1.2E-98 T 15-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AM378_02915 eb9f3fdd0ee06301145c5d778f879931 435 PIRSF PIRSF000099 1 431 1.9E-164 T 15-10-2018 IPR022695 Histidinol dehydrogenase, monofunctional GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AM378_02915 eb9f3fdd0ee06301145c5d778f879931 435 SUPERFAMILY SSF53720 12 428 2.55E-87 T 15-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 AM378_02915 eb9f3fdd0ee06301145c5d778f879931 435 TIGRFAM TIGR00069 hisD: histidinol dehydrogenase 37 427 1.3E-157 T 15-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AM378_02915 eb9f3fdd0ee06301145c5d778f879931 435 Pfam PF00815 Histidinol dehydrogenase 29 428 5.6E-163 T 15-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AM378_20260 6d9c1e45efdc5d37518e02b56172fb7f 91 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 4 90 3.0E-15 T 15-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family AM378_20260 6d9c1e45efdc5d37518e02b56172fb7f 91 TIGRFAM TIGR02385 RelE_StbE: addiction module toxin, RelE/StbE family 4 86 4.2E-10 T 15-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family AM378_20260 6d9c1e45efdc5d37518e02b56172fb7f 91 Gene3D G3DSA:3.30.2310.20 1 91 4.8E-26 T 15-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily AM378_15690 fabc9b3b8d85f33b941751ff4ce155c8 250 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 169 230 9.4E-16 T 15-10-2018 IPR016148 Pili assembly chaperone, C-terminal AM378_15690 fabc9b3b8d85f33b941751ff4ce155c8 250 Gene3D G3DSA:2.60.40.10 27 146 1.0E-39 T 15-10-2018 IPR013783 Immunoglobulin-like fold AM378_15690 fabc9b3b8d85f33b941751ff4ce155c8 250 Gene3D G3DSA:2.60.40.10 148 242 1.5E-23 T 15-10-2018 IPR013783 Immunoglobulin-like fold AM378_15690 fabc9b3b8d85f33b941751ff4ce155c8 250 PRINTS PR00969 Pili chaperone signature 74 95 3.2E-33 T 15-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM378_15690 fabc9b3b8d85f33b941751ff4ce155c8 250 PRINTS PR00969 Pili chaperone signature 104 121 3.2E-33 T 15-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM378_15690 fabc9b3b8d85f33b941751ff4ce155c8 250 PRINTS PR00969 Pili chaperone signature 127 142 3.2E-33 T 15-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM378_15690 fabc9b3b8d85f33b941751ff4ce155c8 250 PRINTS PR00969 Pili chaperone signature 28 37 3.2E-33 T 15-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM378_15690 fabc9b3b8d85f33b941751ff4ce155c8 250 PRINTS PR00969 Pili chaperone signature 164 179 3.2E-33 T 15-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM378_15690 fabc9b3b8d85f33b941751ff4ce155c8 250 ProSitePatterns PS00635 Gram-negative pili assembly chaperone signature. 103 120 - T 15-10-2018 IPR018046 Pili assembly chaperone, conserved site AM378_15690 fabc9b3b8d85f33b941751ff4ce155c8 250 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 28 145 5.2E-37 T 15-10-2018 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 AM378_15690 fabc9b3b8d85f33b941751ff4ce155c8 250 SUPERFAMILY SSF49354 28 145 1.26E-37 T 15-10-2018 IPR008962 PapD-like superfamily AM378_15690 fabc9b3b8d85f33b941751ff4ce155c8 250 SUPERFAMILY SSF49584 153 242 3.92E-24 T 15-10-2018 IPR036316 Pili assembly chaperone, C-terminal domain superfamily AM378_09075 df74479a4af7a632a3b29a4a20d6d476 361 Pfam PF00487 Fatty acid desaturase 66 338 1.4E-33 T 15-10-2018 IPR005804 Fatty acid desaturase domain GO:0006629 AM378_21245 aaf5c78b2f719e59d1645e5b14d35d7f 86 Pfam PF13693 Winged helix-turn-helix DNA-binding 7 80 1.2E-37 T 15-10-2018 IPR038722 Ner, winged helix-turn-helix DNA-binding domain AM378_21245 aaf5c78b2f719e59d1645e5b14d35d7f 86 SUPERFAMILY SSF47413 2 72 1.83E-31 T 15-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AM378_21245 aaf5c78b2f719e59d1645e5b14d35d7f 86 Gene3D G3DSA:1.10.260.40 1 72 1.1E-34 T 15-10-2018 AM378_09010 17a1d00183ef16a15922b1701f2da428 360 SUPERFAMILY SSF56935 23 360 1.1E-77 T 15-10-2018 AM378_09010 17a1d00183ef16a15922b1701f2da428 360 Pfam PF00267 Gram-negative porin 28 360 3.3E-143 T 15-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 AM378_09010 17a1d00183ef16a15922b1701f2da428 360 Gene3D G3DSA:2.40.160.10 23 360 4.6E-149 T 15-10-2018 IPR023614 Porin domain superfamily AM378_09010 17a1d00183ef16a15922b1701f2da428 360 PRINTS PR00183 E.coli/Salmonella-type porin signature 239 256 7.4E-69 T 15-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 AM378_09010 17a1d00183ef16a15922b1701f2da428 360 PRINTS PR00183 E.coli/Salmonella-type porin signature 152 174 7.4E-69 T 15-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 AM378_09010 17a1d00183ef16a15922b1701f2da428 360 PRINTS PR00183 E.coli/Salmonella-type porin signature 271 290 7.4E-69 T 15-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 AM378_09010 17a1d00183ef16a15922b1701f2da428 360 PRINTS PR00183 E.coli/Salmonella-type porin signature 52 70 7.4E-69 T 15-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 AM378_09010 17a1d00183ef16a15922b1701f2da428 360 PRINTS PR00183 E.coli/Salmonella-type porin signature 97 119 7.4E-69 T 15-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 AM378_09010 17a1d00183ef16a15922b1701f2da428 360 PRINTS PR00183 E.coli/Salmonella-type porin signature 23 39 7.4E-69 T 15-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 AM378_09010 17a1d00183ef16a15922b1701f2da428 360 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 97 107 4.0E-15 T 15-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 AM378_09010 17a1d00183ef16a15922b1701f2da428 360 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 315 332 4.0E-15 T 15-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 AM378_09010 17a1d00183ef16a15922b1701f2da428 360 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 53 64 4.0E-15 T 15-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 AM378_09010 17a1d00183ef16a15922b1701f2da428 360 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 233 245 4.0E-15 T 15-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 AM378_09010 17a1d00183ef16a15922b1701f2da428 360 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 154 165 4.0E-15 T 15-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 AM378_23935 51f4498546cdf04ab80719dd34571c22 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 1.8E-14 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_23935 51f4498546cdf04ab80719dd34571c22 302 Gene3D G3DSA:3.40.190.10 93 292 8.5E-56 T 15-10-2018 AM378_23935 51f4498546cdf04ab80719dd34571c22 302 Pfam PF03466 LysR substrate binding domain 89 296 2.1E-37 T 15-10-2018 IPR005119 LysR, substrate-binding AM378_23935 51f4498546cdf04ab80719dd34571c22 302 Gene3D G3DSA:3.40.190.10 166 267 8.5E-56 T 15-10-2018 AM378_23935 51f4498546cdf04ab80719dd34571c22 302 Gene3D G3DSA:1.10.10.10 3 90 1.5E-25 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_23935 51f4498546cdf04ab80719dd34571c22 302 SUPERFAMILY SSF46785 4 88 4.54E-19 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM378_23935 51f4498546cdf04ab80719dd34571c22 302 SUPERFAMILY SSF53850 90 298 6.15E-38 T 15-10-2018 AM378_23205 4beeade45888404fc38ab808c0a1d106 453 TIGRFAM TIGR00359 cello_pts_IIC: PTS system, cellobiose-specific IIC component 12 438 3.5E-157 T 15-10-2018 IPR004796 Phosphotransferase system, cellobiose-type IIC component GO:0008982|GO:0009401|GO:0016021 AM378_23205 4beeade45888404fc38ab808c0a1d106 453 TIGRFAM TIGR00410 lacE: PTS system, lactose/cellobiose family IIC component 12 438 3.5E-157 T 15-10-2018 IPR004501 Phosphotransferase system, EIIC component, type 3 GO:0008982|GO:0009401|GO:0016021 AM378_23205 4beeade45888404fc38ab808c0a1d106 453 Pfam PF02378 Phosphotransferase system, EIIC 30 363 2.3E-43 T 15-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 AM378_23205 4beeade45888404fc38ab808c0a1d106 453 PIRSF PIRSF006351 1 448 1.5E-125 T 15-10-2018 IPR004796 Phosphotransferase system, cellobiose-type IIC component GO:0008982|GO:0009401|GO:0016021 AM378_01345 5d99df42e1b33adf463faea6d95f6edc 305 SUPERFAMILY SSF142338 11 295 6.93E-81 T 15-10-2018 AM378_01345 5d99df42e1b33adf463faea6d95f6edc 305 Pfam PF01933 Uncharacterised protein family UPF0052 12 290 2.6E-74 T 15-10-2018 IPR002882 LPPG:FO 2-phospho-L-lactate transferase CofD/UPF0052 AM378_01345 5d99df42e1b33adf463faea6d95f6edc 305 Gene3D G3DSA:3.40.50.12300 9 301 1.0E-75 T 15-10-2018 IPR038136 Gluconeogenesis factor superfamily AM378_01345 5d99df42e1b33adf463faea6d95f6edc 305 Hamap MF_00973 Gluconeogenesis factor. 8 300 31.512 T 15-10-2018 IPR010119 Gluconeogenesis factor AM378_01345 5d99df42e1b33adf463faea6d95f6edc 305 TIGRFAM TIGR01826 CofD_related: conserved hypothetical protein 12 269 3.5E-94 T 15-10-2018 IPR010119 Gluconeogenesis factor AM378_12420 32ad26e4cc59f9e76739a5f1c21811b1 174 SUPERFAMILY SSF49401 26 174 6.46E-34 T 15-10-2018 IPR008966 Adhesion domain superfamily AM378_12420 32ad26e4cc59f9e76739a5f1c21811b1 174 Gene3D G3DSA:2.60.40.1090 23 174 5.2E-44 T 15-10-2018 IPR036937 Fimbrial-type adhesion domain superfamily GO:0007155|GO:0009289 AM378_12420 32ad26e4cc59f9e76739a5f1c21811b1 174 Pfam PF00419 Fimbrial protein 27 173 4.6E-18 T 15-10-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM378_04900 4c602b254aa6be150dc2283bcbcc7069 347 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 292 318 5.3E-93 T 15-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AM378_04900 4c602b254aa6be150dc2283bcbcc7069 347 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 91 104 5.3E-93 T 15-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AM378_04900 4c602b254aa6be150dc2283bcbcc7069 347 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 148 162 5.3E-93 T 15-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AM378_04900 4c602b254aa6be150dc2283bcbcc7069 347 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 75 89 5.3E-93 T 15-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AM378_04900 4c602b254aa6be150dc2283bcbcc7069 347 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 47 68 5.3E-93 T 15-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AM378_04900 4c602b254aa6be150dc2283bcbcc7069 347 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 166 185 5.3E-93 T 15-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AM378_04900 4c602b254aa6be150dc2283bcbcc7069 347 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 31 47 5.3E-93 T 15-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AM378_04900 4c602b254aa6be150dc2283bcbcc7069 347 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 122 138 5.3E-93 T 15-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AM378_04900 4c602b254aa6be150dc2283bcbcc7069 347 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 203 222 5.3E-93 T 15-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AM378_04900 4c602b254aa6be150dc2283bcbcc7069 347 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 247 266 5.3E-93 T 15-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AM378_04900 4c602b254aa6be150dc2283bcbcc7069 347 Gene3D G3DSA:3.40.190.10 30 314 2.0E-123 T 15-10-2018 AM378_04900 4c602b254aa6be150dc2283bcbcc7069 347 Gene3D G3DSA:3.40.190.10 131 320 2.0E-123 T 15-10-2018 AM378_04900 4c602b254aa6be150dc2283bcbcc7069 347 Pfam PF13416 Bacterial extracellular solute-binding protein 41 311 1.0E-37 T 15-10-2018 IPR006059 Bacterial extracellular solute-binding protein AM378_04900 4c602b254aa6be150dc2283bcbcc7069 347 SUPERFAMILY SSF53850 25 344 8.61E-94 T 15-10-2018 AM378_04900 4c602b254aa6be150dc2283bcbcc7069 347 PIRSF PIRSF019574 1 347 5.4E-128 T 15-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AM378_09650 3a977412490058ed2d3ab71389b0339b 134 TIGRFAM TIGR03500 FliO_TIGR: flagellar biosynthetic protein FliO 33 101 1.1E-19 T 15-10-2018 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 AM378_09650 3a977412490058ed2d3ab71389b0339b 134 Pfam PF04347 Flagellar biosynthesis protein, FliO 45 128 1.5E-22 T 15-10-2018 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 AM378_10080 2a01dcd739f9e07bf53761e0c1d64893 447 Gene3D G3DSA:1.10.490.30 255 447 2.4E-48 T 15-10-2018 IPR038283 Channel forming colicin, C-terminal domain superfamily AM378_10080 2a01dcd739f9e07bf53761e0c1d64893 447 PRINTS PR00280 Channel forming colicin signature 377 390 1.9E-5 T 15-10-2018 IPR000293 Channel forming colicin, C-terminal cytotoxic GO:0016021|GO:0019835|GO:0050829 AM378_10080 2a01dcd739f9e07bf53761e0c1d64893 447 PRINTS PR00280 Channel forming colicin signature 300 315 1.9E-5 T 15-10-2018 IPR000293 Channel forming colicin, C-terminal cytotoxic GO:0016021|GO:0019835|GO:0050829 AM378_10080 2a01dcd739f9e07bf53761e0c1d64893 447 PRINTS PR00280 Channel forming colicin signature 319 335 1.9E-5 T 15-10-2018 IPR000293 Channel forming colicin, C-terminal cytotoxic GO:0016021|GO:0019835|GO:0050829 AM378_10080 2a01dcd739f9e07bf53761e0c1d64893 447 ProDom PD002657 PLASMID COLICIN BACTERIOCIN TRANSMEMBRANE ANTIBIOTIC MEMBRANE ANTIMICROBIAL E1 IB 3D-STRUCTURE 256 434 1.0E-94 T 15-10-2018 IPR000293 Channel forming colicin, C-terminal cytotoxic GO:0016021|GO:0019835|GO:0050829 AM378_10080 2a01dcd739f9e07bf53761e0c1d64893 447 Pfam PF01024 Colicin pore forming domain 260 437 1.8E-33 T 15-10-2018 IPR000293 Channel forming colicin, C-terminal cytotoxic GO:0016021|GO:0019835|GO:0050829 AM378_10080 2a01dcd739f9e07bf53761e0c1d64893 447 SUPERFAMILY SSF56837 153 446 5.36E-77 T 15-10-2018 AM378_13140 33a7335755a6eee6391572ec793c16ba 182 TIGRFAM TIGR00821 EII-GUT: PTS system, glucitol/sorbitol-specific, IIC component 1 181 2.3E-108 T 15-10-2018 IPR004699 Phosphotransferase system, enzyme II sorbitol-specific factor GO:0009401|GO:0016021 AM378_13140 33a7335755a6eee6391572ec793c16ba 182 PIRSF PIRSF038321 2 182 8.5E-88 T 15-10-2018 IPR004699 Phosphotransferase system, enzyme II sorbitol-specific factor GO:0009401|GO:0016021 AM378_13140 33a7335755a6eee6391572ec793c16ba 182 Pfam PF03608 PTS system enzyme II sorbitol-specific factor 5 170 4.9E-76 T 15-10-2018 IPR004699 Phosphotransferase system, enzyme II sorbitol-specific factor GO:0009401|GO:0016021 AM378_08155 98bbc8c5a0ee47b03ebc4a99f54804c3 247 PRINTS PR01374 Gram-negative bacterial tonB protein signature 101 111 2.1E-37 T 15-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 AM378_08155 98bbc8c5a0ee47b03ebc4a99f54804c3 247 PRINTS PR01374 Gram-negative bacterial tonB protein signature 204 221 2.1E-37 T 15-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 AM378_08155 98bbc8c5a0ee47b03ebc4a99f54804c3 247 PRINTS PR01374 Gram-negative bacterial tonB protein signature 185 203 2.1E-37 T 15-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 AM378_08155 98bbc8c5a0ee47b03ebc4a99f54804c3 247 PRINTS PR01374 Gram-negative bacterial tonB protein signature 164 185 2.1E-37 T 15-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 AM378_08155 98bbc8c5a0ee47b03ebc4a99f54804c3 247 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 172 241 1.6E-19 T 15-10-2018 IPR006260 TonB/TolA, C-terminal AM378_08155 98bbc8c5a0ee47b03ebc4a99f54804c3 247 Gene3D G3DSA:3.30.2420.10 160 247 7.4E-31 T 15-10-2018 AM378_08155 98bbc8c5a0ee47b03ebc4a99f54804c3 247 SUPERFAMILY SSF74653 162 238 8.5E-21 T 15-10-2018 AM378_08155 98bbc8c5a0ee47b03ebc4a99f54804c3 247 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 169 239 6.0E-18 T 15-10-2018 IPR037682 TonB, C-terminal GO:0055085 AM378_08155 98bbc8c5a0ee47b03ebc4a99f54804c3 247 Pfam PF16031 TonB N-terminal region 36 166 5.3E-29 T 15-10-2018 AM378_15435 5d5817d45c70a4d2dce2f9c1214dad35 426 Pfam PF01522 Polysaccharide deacetylase 241 379 2.8E-20 T 15-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 AM378_15435 5d5817d45c70a4d2dce2f9c1214dad35 426 Gene3D G3DSA:3.20.20.370 179 419 9.7E-62 T 15-10-2018 AM378_15435 5d5817d45c70a4d2dce2f9c1214dad35 426 SUPERFAMILY SSF88713 204 402 2.28E-30 T 15-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 AM378_19410 fbf6061dbe94316f612964b7f1aea3ab 85 Pfam PF01809 Haemolytic domain 10 75 2.3E-29 T 15-10-2018 IPR002696 Putative membrane protein insertion efficiency factor AM378_19410 fbf6061dbe94316f612964b7f1aea3ab 85 Hamap MF_00386 Putative membrane protein insertion efficiency factor [yidD]. 8 76 24.764 T 15-10-2018 IPR002696 Putative membrane protein insertion efficiency factor AM378_19410 fbf6061dbe94316f612964b7f1aea3ab 85 TIGRFAM TIGR00278 TIGR00278: putative membrane protein insertion efficiency factor 12 83 5.3E-32 T 15-10-2018 IPR002696 Putative membrane protein insertion efficiency factor AM378_19410 fbf6061dbe94316f612964b7f1aea3ab 85 ProDom PD004225 UPF0161 ALPHA-HEMOLYSIN YIDD UNCHARACTERIZED CYTOSOLIC PRECURSOR SIGNAL YTJA RNPA SIMILAR 22 75 3.0E-23 T 15-10-2018 IPR002696 Putative membrane protein insertion efficiency factor AM378_19410 fbf6061dbe94316f612964b7f1aea3ab 85 SMART SM01234 8 75 5.2E-44 T 15-10-2018 IPR002696 Putative membrane protein insertion efficiency factor AM378_08585 7776abdf637022956722f491f445501a 373 Gene3D G3DSA:1.10.150.80 195 293 2.4E-23 T 15-10-2018 AM378_08585 7776abdf637022956722f491f445501a 373 Gene3D G3DSA:3.30.420.10 1 194 6.0E-65 T 15-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AM378_08585 7776abdf637022956722f491f445501a 373 Gene3D G3DSA:1.10.150.80 294 373 3.0E-28 T 15-10-2018 AM378_08585 7776abdf637022956722f491f445501a 373 TIGRFAM TIGR01388 rnd: ribonuclease D 5 369 9.6E-145 T 15-10-2018 IPR006292 Ribonuclease D GO:0008033|GO:0008408|GO:0033890 AM378_08585 7776abdf637022956722f491f445501a 373 Pfam PF00570 HRDC domain 213 279 1.3E-15 T 15-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 AM378_08585 7776abdf637022956722f491f445501a 373 SUPERFAMILY SSF47819 296 372 1.96E-22 T 15-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 AM378_08585 7776abdf637022956722f491f445501a 373 SUPERFAMILY SSF47819 195 300 1.29E-29 T 15-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 AM378_08585 7776abdf637022956722f491f445501a 373 SUPERFAMILY SSF53098 2 210 6.96E-62 T 15-10-2018 IPR012337 Ribonuclease H-like superfamily AM378_08585 7776abdf637022956722f491f445501a 373 SMART SM00474 3 171 3.4E-44 T 15-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 AM378_08585 7776abdf637022956722f491f445501a 373 SMART SM00341 210 289 6.0E-19 T 15-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 AM378_08585 7776abdf637022956722f491f445501a 373 Pfam PF01612 3'-5' exonuclease 3 170 6.9E-37 T 15-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 AM378_08585 7776abdf637022956722f491f445501a 373 Hamap MF_01899 Ribonuclease D [rnd]. 3 371 45.89 T 15-10-2018 IPR006292 Ribonuclease D GO:0008033|GO:0008408|GO:0033890 AM378_20115 4d1a0ee0a53f353224cd63786d49d072 106 TIGRFAM TIGR03421 FeS_CyaY: iron donor protein CyaY 2 105 2.0E-43 T 15-10-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 AM378_20115 4d1a0ee0a53f353224cd63786d49d072 106 Hamap MF_00142 Iron-sulfur cluster assembly protein CyaY [cyaY]. 1 105 29.612 T 15-10-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 AM378_20115 4d1a0ee0a53f353224cd63786d49d072 106 Gene3D G3DSA:3.30.920.10 1 106 1.0E-41 T 15-10-2018 IPR036524 Frataxin/CyaY superfamily GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 AM378_20115 4d1a0ee0a53f353224cd63786d49d072 106 SUPERFAMILY SSF55387 1 105 2.44E-39 T 15-10-2018 AM378_20115 4d1a0ee0a53f353224cd63786d49d072 106 Pfam PF01491 Frataxin-like domain 1 102 1.2E-29 T 15-10-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 AM378_20115 4d1a0ee0a53f353224cd63786d49d072 106 ProSitePatterns PS01344 Frataxin family signature. 50 64 - T 15-10-2018 IPR020895 Frataxin conserved site Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 AM378_20115 4d1a0ee0a53f353224cd63786d49d072 106 SMART SM01219 1 106 2.8E-58 T 15-10-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 AM378_01195 b26c04fb3bd2c02d319d317b0f4d098e 250 SUPERFAMILY SSF53254 4 247 4.71E-78 T 15-10-2018 IPR029033 Histidine phosphatase superfamily AM378_01195 b26c04fb3bd2c02d319d317b0f4d098e 250 Hamap MF_01039 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [gpmA]. 3 230 46.814 T 15-10-2018 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484 AM378_01195 b26c04fb3bd2c02d319d317b0f4d098e 250 SMART SM00855 5 191 1.9E-28 T 15-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 AM378_01195 b26c04fb3bd2c02d319d317b0f4d098e 250 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 6 125 1.4E-30 T 15-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 AM378_01195 b26c04fb3bd2c02d319d317b0f4d098e 250 TIGRFAM TIGR01258 pgm_1: phosphoglycerate mutase 1 family 5 248 6.1E-128 T 15-10-2018 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484 AM378_01195 b26c04fb3bd2c02d319d317b0f4d098e 250 Gene3D G3DSA:3.40.50.1240 2 250 1.2E-93 T 15-10-2018 IPR029033 Histidine phosphatase superfamily AM378_01195 b26c04fb3bd2c02d319d317b0f4d098e 250 PIRSF PIRSF000709 3 116 2.1E-9 T 15-10-2018 AM378_01195 b26c04fb3bd2c02d319d317b0f4d098e 250 PIRSF PIRSF000709 172 240 0.023 T 15-10-2018 AM378_01195 b26c04fb3bd2c02d319d317b0f4d098e 250 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 8 17 - T 15-10-2018 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824 AM378_02600 addd5509995e439b4c0fd11cf96fba3c 385 SUPERFAMILY SSF103473 5 374 1.05E-23 T 15-10-2018 IPR036259 MFS transporter superfamily AM378_02600 addd5509995e439b4c0fd11cf96fba3c 385 Pfam PF06779 Uncharacterised MFS-type transporter YbfB 13 370 2.4E-88 T 15-10-2018 IPR010645 Uncharacterised MFS-type transporter YbfB AM378_02600 addd5509995e439b4c0fd11cf96fba3c 385 Gene3D G3DSA:1.20.1250.20 1 383 6.6E-15 T 15-10-2018 AM378_16080 35941adb93f7c939328bdb05a107ab13 613 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 375 600 3.5E-38 T 15-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 AM378_16080 35941adb93f7c939328bdb05a107ab13 613 Pfam PF04545 Sigma-70, region 4 547 600 1.0E-18 T 15-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 AM378_16080 35941adb93f7c939328bdb05a107ab13 613 TIGRFAM TIGR02393 RpoD_Cterm: RNA polymerase sigma factor RpoD 375 611 7.8E-121 T 15-10-2018 IPR012760 RNA polymerase sigma factor RpoD, C-terminal GO:0003677|GO:0006352|GO:0006355|GO:0016987 AM378_16080 35941adb93f7c939328bdb05a107ab13 613 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 572 598 - T 15-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AM378_16080 35941adb93f7c939328bdb05a107ab13 613 Hamap MF_00963 RNA polymerase sigma factor RpoD [rpoD]. 4 612 46.688 T 15-10-2018 IPR028630 RNA polymerase sigma factor RpoD GO:0006352|GO:0016987 AM378_16080 35941adb93f7c939328bdb05a107ab13 613 PRINTS PR00046 Major sigma-70 factor signature 427 435 6.3E-31 T 15-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AM378_16080 35941adb93f7c939328bdb05a107ab13 613 PRINTS PR00046 Major sigma-70 factor signature 572 587 6.3E-31 T 15-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AM378_16080 35941adb93f7c939328bdb05a107ab13 613 PRINTS PR00046 Major sigma-70 factor signature 551 563 6.3E-31 T 15-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AM378_16080 35941adb93f7c939328bdb05a107ab13 613 PRINTS PR00046 Major sigma-70 factor signature 587 598 6.3E-31 T 15-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AM378_16080 35941adb93f7c939328bdb05a107ab13 613 PRINTS PR00046 Major sigma-70 factor signature 403 416 6.3E-31 T 15-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AM378_16080 35941adb93f7c939328bdb05a107ab13 613 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 403 416 - T 15-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AM378_16080 35941adb93f7c939328bdb05a107ab13 613 Gene3D G3DSA:1.10.601.10 113 448 1.3E-148 T 15-10-2018 AM378_16080 35941adb93f7c939328bdb05a107ab13 613 Pfam PF04542 Sigma-70 region 2 379 448 1.7E-21 T 15-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 AM378_16080 35941adb93f7c939328bdb05a107ab13 613 Pfam PF04539 Sigma-70 region 3 458 533 3.5E-29 T 15-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 AM378_16080 35941adb93f7c939328bdb05a107ab13 613 Gene3D G3DSA:1.10.10.10 452 528 5.5E-33 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_16080 35941adb93f7c939328bdb05a107ab13 613 SUPERFAMILY SSF88946 115 446 4.58E-102 T 15-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 AM378_16080 35941adb93f7c939328bdb05a107ab13 613 Gene3D G3DSA:1.10.10.10 529 613 1.8E-37 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_16080 35941adb93f7c939328bdb05a107ab13 613 SUPERFAMILY SSF88659 509 611 2.32E-25 T 15-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like AM378_16080 35941adb93f7c939328bdb05a107ab13 613 Pfam PF04546 Sigma-70, non-essential region 139 348 4.4E-74 T 15-10-2018 IPR007631 RNA polymerase sigma factor 70, non-essential domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM378_16080 35941adb93f7c939328bdb05a107ab13 613 Pfam PF03979 Sigma-70 factor, region 1.1 4 81 2.4E-30 T 15-10-2018 IPR007127 RNA polymerase sigma factor 70, region 1.1 GO:0003677|GO:0006355 AM378_16080 35941adb93f7c939328bdb05a107ab13 613 Gene3D G3DSA:1.10.220.120 1 64 4.3E-31 T 15-10-2018 AM378_16080 35941adb93f7c939328bdb05a107ab13 613 SUPERFAMILY SSF88659 452 525 1.54E-20 T 15-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like AM378_16080 35941adb93f7c939328bdb05a107ab13 613 Pfam PF00140 Sigma-70 factor, region 1.2 98 128 1.8E-12 T 15-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM378_02285 138aee00605337e83eaf674aa87ed5e1 258 SUPERFAMILY SSF51658 1 257 1.52E-83 T 15-10-2018 IPR036237 Xylose isomerase-like superfamily AM378_02285 138aee00605337e83eaf674aa87ed5e1 258 Gene3D G3DSA:3.20.20.150 1 258 1.1E-76 T 15-10-2018 AM378_02285 138aee00605337e83eaf674aa87ed5e1 258 Pfam PF01261 Xylose isomerase-like TIM barrel 21 219 3.4E-34 T 15-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain AM378_02285 138aee00605337e83eaf674aa87ed5e1 258 PIRSF PIRSF006241 1 258 2.8E-86 T 15-10-2018 IPR026040 Hydroxypyruvate isomerase-like AM378_10660 9f6cb3eef6ca36b6f4d29e81c622e37f 246 ProSitePatterns PS00211 ABC transporters family signature. 133 147 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM378_10660 9f6cb3eef6ca36b6f4d29e81c622e37f 246 Pfam PF00005 ABC transporter 26 160 3.5E-26 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM378_10660 9f6cb3eef6ca36b6f4d29e81c622e37f 246 SUPERFAMILY SSF52540 9 205 2.48E-53 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_10660 9f6cb3eef6ca36b6f4d29e81c622e37f 246 Gene3D G3DSA:3.40.50.300 7 212 6.3E-57 T 15-10-2018 AM378_10660 9f6cb3eef6ca36b6f4d29e81c622e37f 246 SMART SM00382 34 211 2.6E-12 T 15-10-2018 IPR003593 AAA+ ATPase domain AM378_08685 44aa79f13183b9add0ac07fea1c2d3cd 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 5 18 1.6E-42 T 15-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 AM378_08685 44aa79f13183b9add0ac07fea1c2d3cd 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 138 150 1.6E-42 T 15-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 AM378_08685 44aa79f13183b9add0ac07fea1c2d3cd 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 107 126 1.6E-42 T 15-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 AM378_08685 44aa79f13183b9add0ac07fea1c2d3cd 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 61 77 1.6E-42 T 15-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 AM378_08685 44aa79f13183b9add0ac07fea1c2d3cd 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 83 99 1.6E-42 T 15-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 AM378_08685 44aa79f13183b9add0ac07fea1c2d3cd 173 Gene3D G3DSA:3.30.420.10 2 159 2.7E-54 T 15-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AM378_08685 44aa79f13183b9add0ac07fea1c2d3cd 173 TIGRFAM TIGR00228 ruvC: crossover junction endodeoxyribonuclease RuvC 4 158 6.2E-81 T 15-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 AM378_08685 44aa79f13183b9add0ac07fea1c2d3cd 173 SUPERFAMILY SSF53098 3 156 1.33E-54 T 15-10-2018 IPR012337 Ribonuclease H-like superfamily AM378_08685 44aa79f13183b9add0ac07fea1c2d3cd 173 Hamap MF_00034 Crossover junction endodeoxyribonuclease RuvC [ruvC]. 2 153 46.865 T 15-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 AM378_08685 44aa79f13183b9add0ac07fea1c2d3cd 173 Pfam PF02075 Crossover junction endodeoxyribonuclease RuvC 4 150 7.8E-66 T 15-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 AM378_08685 44aa79f13183b9add0ac07fea1c2d3cd 173 ProSitePatterns PS01321 Crossover junction endodeoxyribonuclease ruvC signature. 113 147 - T 15-10-2018 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site GO:0008821 AM378_22695 feeb52c2b262f5420e1b219022767d3f 564 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 392 540 5.6E-50 T 15-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 AM378_22695 feeb52c2b262f5420e1b219022767d3f 564 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 14 563 2.0E-204 T 15-10-2018 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 AM378_22695 feeb52c2b262f5420e1b219022767d3f 564 SUPERFAMILY SSF52518 367 562 5.36E-65 T 15-10-2018 IPR029061 Thiamin diphosphate-binding fold AM378_22695 feeb52c2b262f5420e1b219022767d3f 564 SUPERFAMILY SSF52467 196 360 5.4E-56 T 15-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily AM378_22695 feeb52c2b262f5420e1b219022767d3f 564 Gene3D G3DSA:3.40.50.1220 196 359 9.8E-56 T 15-10-2018 AM378_22695 feeb52c2b262f5420e1b219022767d3f 564 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 14 180 7.8E-58 T 15-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 AM378_22695 feeb52c2b262f5420e1b219022767d3f 564 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 201 336 1.9E-43 T 15-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 AM378_22695 feeb52c2b262f5420e1b219022767d3f 564 SUPERFAMILY SSF52518 12 190 1.51E-59 T 15-10-2018 IPR029061 Thiamin diphosphate-binding fold AM378_22695 feeb52c2b262f5420e1b219022767d3f 564 Gene3D G3DSA:3.40.50.970 362 563 6.8E-63 T 15-10-2018 AM378_22695 feeb52c2b262f5420e1b219022767d3f 564 Gene3D G3DSA:3.40.50.970 8 194 9.3E-68 T 15-10-2018 AM378_22695 feeb52c2b262f5420e1b219022767d3f 564 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 429 448 - T 15-10-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 AM378_20125 48afccb806e9d79427c5d5e21e6d25e4 274 TIGRFAM TIGR00652 DapF: diaminopimelate epimerase 1 273 1.6E-101 T 15-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 AM378_20125 48afccb806e9d79427c5d5e21e6d25e4 274 Gene3D G3DSA:3.10.310.10 115 261 1.9E-106 T 15-10-2018 AM378_20125 48afccb806e9d79427c5d5e21e6d25e4 274 SUPERFAMILY SSF54506 2 273 4.03E-54 T 15-10-2018 AM378_20125 48afccb806e9d79427c5d5e21e6d25e4 274 Gene3D G3DSA:3.10.310.10 3 270 1.9E-106 T 15-10-2018 AM378_20125 48afccb806e9d79427c5d5e21e6d25e4 274 ProSitePatterns PS01326 Diaminopimelate epimerase signature. 64 78 - T 15-10-2018 IPR018510 Diaminopimelate epimerase, active site GO:0005737|GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 AM378_20125 48afccb806e9d79427c5d5e21e6d25e4 274 Hamap MF_00197 Diaminopimelate epimerase [dapF]. 1 274 39.019 T 15-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 AM378_20125 48afccb806e9d79427c5d5e21e6d25e4 274 Pfam PF01678 Diaminopimelate epimerase 3 123 5.0E-34 T 15-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 AM378_20125 48afccb806e9d79427c5d5e21e6d25e4 274 Pfam PF01678 Diaminopimelate epimerase 152 267 3.5E-31 T 15-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 AM378_18730 3cb6bebcd992b251bed84be1c16900b5 305 TIGRFAM TIGR00751 menA: 1,4-dihydroxy-2-naphthoate octaprenyltransferase 18 301 2.1E-133 T 15-10-2018 AM378_18730 3cb6bebcd992b251bed84be1c16900b5 305 Pfam PF01040 UbiA prenyltransferase family 27 274 3.3E-39 T 15-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 AM378_18730 3cb6bebcd992b251bed84be1c16900b5 305 PIRSF PIRSF005355 1 305 3.1E-91 T 15-10-2018 IPR026046 UbiA prenyltransferase domain containing protein 1 GO:0004659 Reactome: R-HSA-6806664 AM378_18730 3cb6bebcd992b251bed84be1c16900b5 305 Hamap MF_01937 1,4-dihydroxy-2-naphthoate octaprenyltransferase [menA]. 9 302 20.924 T 15-10-2018 IPR004657 1,4-dihydroxy-2-naphthoate octaprenyltransferase GO:0009234|GO:0016021|GO:0046428 KEGG: 00130+2.5.1.74|MetaCyc: PWY-5839|MetaCyc: PWY-5851|MetaCyc: PWY-5852|MetaCyc: PWY-5853|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 AM378_01920 d2e32b1cda81f8a3bfec6bf77ce280da 232 SUPERFAMILY SSF52540 2 220 9.03E-58 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_01920 d2e32b1cda81f8a3bfec6bf77ce280da 232 TIGRFAM TIGR03410 urea_trans_UrtE: urea ABC transporter, ATP-binding protein UrtE 2 232 1.1E-105 T 15-10-2018 IPR017780 ABC transporter, urea, ATP-binding protein, UrtE AM378_01920 d2e32b1cda81f8a3bfec6bf77ce280da 232 Pfam PF00005 ABC transporter 17 161 2.3E-30 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM378_01920 d2e32b1cda81f8a3bfec6bf77ce280da 232 Gene3D G3DSA:3.40.50.300 1 226 6.8E-59 T 15-10-2018 AM378_01920 d2e32b1cda81f8a3bfec6bf77ce280da 232 SMART SM00382 26 211 1.8E-9 T 15-10-2018 IPR003593 AAA+ ATPase domain AM378_18705 1ee2d1553d59d8920e4d96f002b1f05b 731 Pfam PF00271 Helicase conserved C-terminal domain 521 588 8.2E-6 T 15-10-2018 IPR001650 Helicase, C-terminal AM378_18705 1ee2d1553d59d8920e4d96f002b1f05b 731 Gene3D G3DSA:1.10.8.630 2 112 3.9E-38 T 15-10-2018 AM378_18705 1ee2d1553d59d8920e4d96f002b1f05b 731 TIGRFAM TIGR00595 priA: primosomal protein N' 220 729 2.2E-207 T 15-10-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 AM378_18705 1ee2d1553d59d8920e4d96f002b1f05b 731 SMART SM00490 491 588 6.9E-9 T 15-10-2018 IPR001650 Helicase, C-terminal AM378_18705 1ee2d1553d59d8920e4d96f002b1f05b 731 Pfam PF00270 DEAD/DEAH box helicase 218 363 6.9E-14 T 15-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AM378_18705 1ee2d1553d59d8920e4d96f002b1f05b 731 SMART SM00487 194 394 9.9E-18 T 15-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AM378_18705 1ee2d1553d59d8920e4d96f002b1f05b 731 Hamap MF_00983 Probable primosomal protein N' [priA]. 6 731 25.778 T 15-10-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 AM378_18705 1ee2d1553d59d8920e4d96f002b1f05b 731 SUPERFAMILY SSF52540 219 600 1.5E-40 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_18705 1ee2d1553d59d8920e4d96f002b1f05b 731 Gene3D G3DSA:3.40.50.300 183 378 3.4E-82 T 15-10-2018 AM378_18705 1ee2d1553d59d8920e4d96f002b1f05b 731 SUPERFAMILY SSF144020 435 482 6.28E-5 T 15-10-2018 IPR024064 FdhE-like superfamily AM378_13345 3b86584febeff14f3cea1be02a876e0a 398 PIRSF PIRSF006004 23 391 3.1E-147 T 15-10-2018 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 AM378_13345 3b86584febeff14f3cea1be02a876e0a 398 Hamap MF_01849 Dual-specificity RNA methyltransferase RlmN [rlmN]. 31 378 74.781 T 15-10-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 AM378_13345 3b86584febeff14f3cea1be02a876e0a 398 SUPERFAMILY SSF102114 130 347 4.45E-15 T 15-10-2018 AM378_13345 3b86584febeff14f3cea1be02a876e0a 398 Gene3D G3DSA:1.10.150.530 9 92 1.4E-30 T 15-10-2018 AM378_13345 3b86584febeff14f3cea1be02a876e0a 398 Gene3D G3DSA:3.20.20.70 93 363 1.6E-114 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM378_13345 3b86584febeff14f3cea1be02a876e0a 398 TIGRFAM TIGR00048 rRNA_mod_RlmN: 23S rRNA (adenine(2503)-C(2))-methyltransferase 30 383 6.1E-174 T 15-10-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 AM378_13345 3b86584febeff14f3cea1be02a876e0a 398 Pfam PF04055 Radical SAM superfamily 134 304 1.9E-17 T 15-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AM378_15900 72d2cc0a94fbd4cc509ef7a1e3e80ac1 273 Pfam PF01048 Phosphorylase superfamily 25 270 3.8E-46 T 15-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 AM378_15900 72d2cc0a94fbd4cc509ef7a1e3e80ac1 273 TIGRFAM TIGR01697 PNPH-PUNA-XAPA: inosine/guanosine/xanthosine phosphorylase family 25 269 3.3E-101 T 15-10-2018 IPR011268 Purine nucleoside phosphorylase GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-6798695|Reactome: R-HSA-74217|Reactome: R-HSA-74259 AM378_15900 72d2cc0a94fbd4cc509ef7a1e3e80ac1 273 Gene3D G3DSA:3.40.50.1580 2 272 2.8E-106 T 15-10-2018 AM378_15900 72d2cc0a94fbd4cc509ef7a1e3e80ac1 273 SUPERFAMILY SSF53167 5 272 1.07E-86 T 15-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 AM378_15900 72d2cc0a94fbd4cc509ef7a1e3e80ac1 273 TIGRFAM TIGR01699 XAPA: xanthosine phosphorylase 25 270 6.3E-123 T 15-10-2018 IPR010943 Xanthosine phosphorylase GO:0004731|GO:0005737|GO:0055086 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 AM378_15900 72d2cc0a94fbd4cc509ef7a1e3e80ac1 273 PIRSF PIRSF000477 2 273 4.6E-107 T 15-10-2018 IPR011268 Purine nucleoside phosphorylase GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-6798695|Reactome: R-HSA-74217|Reactome: R-HSA-74259 AM378_15900 72d2cc0a94fbd4cc509ef7a1e3e80ac1 273 ProSitePatterns PS01240 Purine and other phosphorylases family 2 signature. 77 118 - T 15-10-2018 IPR018099 Purine phosphorylase, family 2, conserved site GO:0016763 AM378_15960 13d765b818dd00f4515c23b994aa5704 210 TIGRFAM TIGR00052 TIGR00052: nudix-type nucleoside diphosphatase, YffH/AdpP family 15 199 5.1E-74 T 15-10-2018 IPR004385 Nucleoside diphosphate pyrophosphatase GO:0016818|GO:0046872 Reactome: R-HSA-480985 AM378_15960 13d765b818dd00f4515c23b994aa5704 210 Gene3D G3DSA:3.90.79.10 2 209 2.9E-64 T 15-10-2018 AM378_15960 13d765b818dd00f4515c23b994aa5704 210 Pfam PF00293 NUDIX domain 59 179 7.9E-11 T 15-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 AM378_15960 13d765b818dd00f4515c23b994aa5704 210 ProSitePatterns PS00893 Nudix box signature. 97 118 - T 15-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 AM378_15960 13d765b818dd00f4515c23b994aa5704 210 SUPERFAMILY SSF55811 9 207 5.28E-50 T 15-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 AM378_05935 0e0e3909d17bb5c599846ab6fbb4f2d6 87 ProDom PD063639 YJBD CYTOPLASMIC STY4411 YPO2363 ECS5006 Y1969 1 87 3.0E-21 T 15-10-2018 IPR020317 Uncharacterised protein family YjbD AM378_05935 0e0e3909d17bb5c599846ab6fbb4f2d6 87 Pfam PF11656 YjbD family (DUF3811) 1 87 2.4E-36 T 15-10-2018 IPR020317 Uncharacterised protein family YjbD AM378_01330 bc5c4fb62e6a68d0cd7908fdf9fe6ab8 240 Gene3D G3DSA:3.40.50.300 1 231 8.7E-49 T 15-10-2018 AM378_01330 bc5c4fb62e6a68d0cd7908fdf9fe6ab8 240 SMART SM00382 26 214 3.0E-10 T 15-10-2018 IPR003593 AAA+ ATPase domain AM378_01330 bc5c4fb62e6a68d0cd7908fdf9fe6ab8 240 Pfam PF00005 ABC transporter 19 166 9.1E-23 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM378_01330 bc5c4fb62e6a68d0cd7908fdf9fe6ab8 240 SUPERFAMILY SSF52540 2 225 9.11E-50 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_08875 ae625d9edfcf094f35a11abcc21d2942 319 TIGRFAM TIGR00824 EIIA-man: PTS system, mannose/fructose/sorbose family, IIA component 3 117 1.8E-45 T 15-10-2018 IPR013789 Phosphotransferase system, mannose family IIA component GO:0005737|GO:0008643|GO:0016773 AM378_08875 ae625d9edfcf094f35a11abcc21d2942 319 Pfam PF03610 PTS system fructose IIA component 5 116 1.3E-33 T 15-10-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 AM378_08875 ae625d9edfcf094f35a11abcc21d2942 319 SUPERFAMILY SSF52728 159 318 4.71E-56 T 15-10-2018 IPR036667 Phosphotransferase system, sorbose subfamily IIB component superfamily GO:0005737|GO:0008982|GO:0009401 AM378_08875 ae625d9edfcf094f35a11abcc21d2942 319 SUPERFAMILY SSF53062 3 132 7.19E-37 T 15-10-2018 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily GO:0009401|GO:0016021 AM378_08875 ae625d9edfcf094f35a11abcc21d2942 319 Pfam PF03830 PTS system sorbose subfamily IIB component 161 307 1.9E-56 T 15-10-2018 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 AM378_08875 ae625d9edfcf094f35a11abcc21d2942 319 Gene3D G3DSA:3.40.35.10 156 319 1.4E-61 T 15-10-2018 IPR036667 Phosphotransferase system, sorbose subfamily IIB component superfamily GO:0005737|GO:0008982|GO:0009401 AM378_08875 ae625d9edfcf094f35a11abcc21d2942 319 TIGRFAM TIGR00854 pts-sorbose: PTS system, mannose/fructose/sorbose family, IIB component 161 307 1.6E-56 T 15-10-2018 IPR018455 Phosphotransferase system, sorbose subfamily IIB component, subgroup GO:0005737|GO:0008982|GO:0009401 AM378_08875 ae625d9edfcf094f35a11abcc21d2942 319 Gene3D G3DSA:3.40.50.510 2 134 1.2E-41 T 15-10-2018 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily GO:0009401|GO:0016021 AM378_22300 7666a0a0fa73d9ff62b4ce9d7208e94a 53 Pfam PF07043 Protein of unknown function (DUF1328) 6 44 4.8E-13 T 15-10-2018 IPR009760 Protein of unknown function DUF1328 GO:0005886 AM378_22300 7666a0a0fa73d9ff62b4ce9d7208e94a 53 Hamap MF_01361 UPF0391 membrane protein YtjA [ytjA]. 1 48 18.186 T 15-10-2018 IPR009760 Protein of unknown function DUF1328 GO:0005886 AM378_22300 7666a0a0fa73d9ff62b4ce9d7208e94a 53 PIRSF PIRSF036466 1 53 1.4E-19 T 15-10-2018 IPR009760 Protein of unknown function DUF1328 GO:0005886 AM378_00305 d50b60f32347c88b8444b28c7f231427 434 SUPERFAMILY SSF53613 36 416 6.55E-46 T 15-10-2018 IPR029056 Ribokinase-like AM378_00305 d50b60f32347c88b8444b28c7f231427 434 Pfam PF00294 pfkB family carbohydrate kinase 75 294 1.5E-9 T 15-10-2018 IPR011611 Carbohydrate kinase PfkB AM378_09625 0b267ab375e1adf4343aa2877aedd5bd 148 TIGRFAM TIGR02473 flagell_FliJ: flagellar export protein FliJ 5 144 5.0E-33 T 15-10-2018 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 AM378_09625 0b267ab375e1adf4343aa2877aedd5bd 148 PIRSF PIRSF019404 1 148 1.5E-53 T 15-10-2018 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 AM378_09625 0b267ab375e1adf4343aa2877aedd5bd 148 PRINTS PR01004 Flagellar FliJ protein signature 4 26 4.9E-40 T 15-10-2018 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 AM378_09625 0b267ab375e1adf4343aa2877aedd5bd 148 PRINTS PR01004 Flagellar FliJ protein signature 126 146 4.9E-40 T 15-10-2018 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 AM378_09625 0b267ab375e1adf4343aa2877aedd5bd 148 PRINTS PR01004 Flagellar FliJ protein signature 86 107 4.9E-40 T 15-10-2018 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 AM378_09625 0b267ab375e1adf4343aa2877aedd5bd 148 PRINTS PR01004 Flagellar FliJ protein signature 27 43 4.9E-40 T 15-10-2018 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 AM378_09625 0b267ab375e1adf4343aa2877aedd5bd 148 PRINTS PR01004 Flagellar FliJ protein signature 44 61 4.9E-40 T 15-10-2018 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 AM378_09625 0b267ab375e1adf4343aa2877aedd5bd 148 PRINTS PR01004 Flagellar FliJ protein signature 63 84 4.9E-40 T 15-10-2018 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 AM378_09625 0b267ab375e1adf4343aa2877aedd5bd 148 PRINTS PR01004 Flagellar FliJ protein signature 108 126 4.9E-40 T 15-10-2018 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 AM378_09625 0b267ab375e1adf4343aa2877aedd5bd 148 Pfam PF02050 Flagellar FliJ protein 19 141 5.5E-37 T 15-10-2018 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 AM378_02620 620123dc12373475a9260d57149d72b6 330 Pfam PF13407 Periplasmic binding protein domain 27 298 2.2E-64 T 15-10-2018 IPR025997 Periplasmic binding protein AM378_02620 620123dc12373475a9260d57149d72b6 330 SUPERFAMILY SSF53822 24 329 5.69E-85 T 15-10-2018 IPR028082 Periplasmic binding protein-like I AM378_02620 620123dc12373475a9260d57149d72b6 330 Gene3D G3DSA:3.40.50.2300 27 301 4.0E-122 T 15-10-2018 AM378_02620 620123dc12373475a9260d57149d72b6 330 Gene3D G3DSA:3.40.50.2300 133 278 4.0E-122 T 15-10-2018 AM378_21215 3d45660ba400beb6af6496a809fe5d9d 334 Hamap MF_01855 Fructose-1,6-bisphosphatase class 1 [fbp]. 2 330 42.269 T 15-10-2018 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0016791 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 AM378_21215 3d45660ba400beb6af6496a809fe5d9d 334 Gene3D G3DSA:3.30.540.10 1 195 1.2E-73 T 15-10-2018 AM378_21215 3d45660ba400beb6af6496a809fe5d9d 334 ProSitePatterns PS00124 Fructose-1-6-bisphosphatase active site. 270 282 - T 15-10-2018 IPR020548 Fructose-1,6-bisphosphatase, active site GO:0005975|GO:0042578 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 AM378_21215 3d45660ba400beb6af6496a809fe5d9d 334 Pfam PF00316 Fructose-1-6-bisphosphatase, N-terminal domain 3 194 6.3E-79 T 15-10-2018 IPR033391 Fructose-1-6-bisphosphatase class I, N-terminal KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 AM378_21215 3d45660ba400beb6af6496a809fe5d9d 334 Gene3D G3DSA:3.40.190.80 197 334 1.2E-59 T 15-10-2018 AM378_21215 3d45660ba400beb6af6496a809fe5d9d 334 PIRSF PIRSF000904 1 333 5.3E-123 T 15-10-2018 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0016791 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 AM378_21215 3d45660ba400beb6af6496a809fe5d9d 334 PIRSF PIRSF500210 1 333 4.5E-126 T 15-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 AM378_21215 3d45660ba400beb6af6496a809fe5d9d 334 SUPERFAMILY SSF56655 2 327 5.64E-111 T 15-10-2018 AM378_21215 3d45660ba400beb6af6496a809fe5d9d 334 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 27 54 2.9E-72 T 15-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 AM378_21215 3d45660ba400beb6af6496a809fe5d9d 334 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 205 232 2.9E-72 T 15-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 AM378_21215 3d45660ba400beb6af6496a809fe5d9d 334 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 148 171 2.9E-72 T 15-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 AM378_21215 3d45660ba400beb6af6496a809fe5d9d 334 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 304 329 2.9E-72 T 15-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 AM378_21215 3d45660ba400beb6af6496a809fe5d9d 334 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 179 202 2.9E-72 T 15-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 AM378_21215 3d45660ba400beb6af6496a809fe5d9d 334 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 64 90 2.9E-72 T 15-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 AM378_19150 8b9916279d7667c89e146700db7db565 328 SUPERFAMILY SSF56112 6 327 1.6E-87 T 15-10-2018 IPR011009 Protein kinase-like domain superfamily AM378_19150 8b9916279d7667c89e146700db7db565 328 Pfam PF01636 Phosphotransferase enzyme family 33 262 2.2E-45 T 15-10-2018 IPR002575 Aminoglycoside phosphotransferase AM378_19150 8b9916279d7667c89e146700db7db565 328 Gene3D G3DSA:1.20.1270.170 149 307 2.4E-122 T 15-10-2018 AM378_19150 8b9916279d7667c89e146700db7db565 328 Gene3D G3DSA:3.30.200.70 13 108 2.4E-122 T 15-10-2018 AM378_19150 8b9916279d7667c89e146700db7db565 328 Hamap MF_01497 Stress response kinase A [srkA]. 4 318 45.837 T 15-10-2018 IPR032882 SrkA/RdoA protein kinase GO:0004674|GO:0006468 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1|KEGG: 04714+2.7.11.1|KEGG: 04926+2.7.11.1|KEGG: 05163+2.7.11.1|KEGG: 05165+2.7.11.1|KEGG: 05170+2.7.11.1 AM378_19150 8b9916279d7667c89e146700db7db565 328 Gene3D G3DSA:1.10.510.10 60 258 2.4E-122 T 15-10-2018 AM378_01725 fe4d0056727b633c783a544c9f2a8290 516 Gene3D G3DSA:3.30.420.40 239 505 9.2E-52 T 15-10-2018 AM378_01725 fe4d0056727b633c783a544c9f2a8290 516 SUPERFAMILY SSF53067 248 497 5.18E-48 T 15-10-2018 AM378_01725 fe4d0056727b633c783a544c9f2a8290 516 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 2 246 3.6E-50 T 15-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 AM378_01725 fe4d0056727b633c783a544c9f2a8290 516 SUPERFAMILY SSF53067 1 248 1.35E-56 T 15-10-2018 AM378_01725 fe4d0056727b633c783a544c9f2a8290 516 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 288 453 1.4E-17 T 15-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 AM378_01725 fe4d0056727b633c783a544c9f2a8290 516 Gene3D G3DSA:3.30.420.40 1 237 1.6E-62 T 15-10-2018 AM378_01725 fe4d0056727b633c783a544c9f2a8290 516 PIRSF PIRSF000538 1 505 7.3E-114 T 15-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 AM378_01725 fe4d0056727b633c783a544c9f2a8290 516 Hamap MF_02053 Autoinducer-2 kinase [lsrK]. 1 516 78.345 T 15-10-2018 IPR033676 Autoinducer-2 kinase GO:0009372|GO:0071518 AM378_21455 5c5e3a6e549c5d559a88c05546f1d32c 438 TIGRFAM TIGR04299 antiport_PotE: putrescine-ornithine antiporter 5 432 1.1E-239 T 15-10-2018 IPR027566 Putrescine transporter PotE GO:0015496|GO:0015822|GO:0015847 AM378_21455 5c5e3a6e549c5d559a88c05546f1d32c 438 Gene3D G3DSA:1.20.1740.10 1 434 4.2E-58 T 15-10-2018 AM378_21455 5c5e3a6e549c5d559a88c05546f1d32c 438 PIRSF PIRSF006060 1 436 2.9E-48 T 15-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 AM378_21455 5c5e3a6e549c5d559a88c05546f1d32c 438 TIGRFAM TIGR00905 2A0302: transporter, basic amino acid/polyamine antiporter (APA) family 1 429 2.3E-141 T 15-10-2018 IPR004754 Amino acid antiporter GO:0006865|GO:0016021 AM378_21455 5c5e3a6e549c5d559a88c05546f1d32c 438 Hamap MF_02073 Putrescine transporter PotE [potE]. 8 435 36.303 T 15-10-2018 IPR027566 Putrescine transporter PotE GO:0015496|GO:0015822|GO:0015847 AM378_21455 5c5e3a6e549c5d559a88c05546f1d32c 438 Pfam PF13520 Amino acid permease 9 415 1.1E-45 T 15-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 AM378_07095 81faac0871f4fdf6efbd75e1ad3a923a 206 ProDom PD037769 DNA-BINDING YHEO UNCHARACTERIZED BACTERIA SIMILAR HI0575 CONTAINING TRANSCRIPTION REGULATOR HELIX-TURN-HELIX 14 119 5.0E-31 T 15-10-2018 IPR013559 YheO-like AM378_07095 81faac0871f4fdf6efbd75e1ad3a923a 206 Pfam PF13309 HTH domain 140 201 3.9E-17 T 15-10-2018 IPR039445 Transcriptional regulator DauR-like, HTH domain AM378_07095 81faac0871f4fdf6efbd75e1ad3a923a 206 Pfam PF08348 YheO-like PAS domain 8 113 4.7E-22 T 15-10-2018 IPR013559 YheO-like AM378_06130 c051139955b10d88c9ebf151cd9f89d9 229 Gene3D G3DSA:1.10.10.10 1 64 3.5E-15 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_06130 c051139955b10d88c9ebf151cd9f89d9 229 Pfam PF08279 HTH domain 6 59 2.2E-14 T 15-10-2018 IPR013196 Helix-turn-helix, type 11 AM378_06130 c051139955b10d88c9ebf151cd9f89d9 229 Pfam PF13280 WYL domain 141 227 2.7E-13 T 15-10-2018 IPR026881 WYL domain AM378_06130 c051139955b10d88c9ebf151cd9f89d9 229 SUPERFAMILY SSF46785 1 62 1.91E-9 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM378_13170 112ef6e7e21878de9f76935fc1782279 323 Gene3D G3DSA:3.10.580.10 196 320 4.7E-32 T 15-10-2018 AM378_13170 112ef6e7e21878de9f76935fc1782279 323 SMART SM00116 210 258 1.1 T 15-10-2018 IPR000644 CBS domain AM378_13170 112ef6e7e21878de9f76935fc1782279 323 SMART SM00116 274 322 4.6 T 15-10-2018 IPR000644 CBS domain AM378_13170 112ef6e7e21878de9f76935fc1782279 323 Pfam PF00571 CBS domain 278 317 0.0017 T 15-10-2018 IPR000644 CBS domain AM378_13170 112ef6e7e21878de9f76935fc1782279 323 Pfam PF00571 CBS domain 201 258 3.8E-5 T 15-10-2018 IPR000644 CBS domain AM378_13170 112ef6e7e21878de9f76935fc1782279 323 Gene3D G3DSA:3.40.50.10490 3 195 2.5E-61 T 15-10-2018 AM378_13170 112ef6e7e21878de9f76935fc1782279 323 Pfam PF01380 SIS domain 41 171 1.6E-32 T 15-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 AM378_13170 112ef6e7e21878de9f76935fc1782279 323 PIRSF PIRSF004692 1 323 8.5E-119 T 15-10-2018 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 AM378_13170 112ef6e7e21878de9f76935fc1782279 323 SUPERFAMILY SSF54631 267 320 2.65E-6 T 15-10-2018 AM378_13170 112ef6e7e21878de9f76935fc1782279 323 SUPERFAMILY SSF53697 11 258 5.56E-59 T 15-10-2018 AM378_13170 112ef6e7e21878de9f76935fc1782279 323 TIGRFAM TIGR00393 kpsF: sugar isomerase, KpsF/GutQ family 45 313 1.6E-114 T 15-10-2018 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 AM378_08430 623c2cd7d873e10b96b915d88ae2f0c5 137 SUPERFAMILY SSF51316 11 131 1.41E-55 T 15-10-2018 IPR011057 Mss4-like superfamily AM378_08430 623c2cd7d873e10b96b915d88ae2f0c5 137 Gene3D G3DSA:2.170.150.20 6 136 3.1E-58 T 15-10-2018 AM378_08430 623c2cd7d873e10b96b915d88ae2f0c5 137 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 13 135 3.5E-58 T 15-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 AM378_08430 623c2cd7d873e10b96b915d88ae2f0c5 137 Hamap MF_01400 Peptide methionine sulfoxide reductase MsrB [msrB]. 2 129 36.358 T 15-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 AM378_08430 623c2cd7d873e10b96b915d88ae2f0c5 137 Pfam PF01641 SelR domain 13 127 8.4E-52 T 15-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 AM378_00525 c30787c1739dbb7367efdd1c37496605 240 TIGRFAM TIGR01854 lipid_A_lpxH: UDP-2,3-diacylglucosamine diphosphatase 3 232 1.1E-107 T 15-10-2018 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54 AM378_00525 c30787c1739dbb7367efdd1c37496605 240 SUPERFAMILY SSF56300 1 205 4.11E-33 T 15-10-2018 AM378_00525 c30787c1739dbb7367efdd1c37496605 240 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 1 203 5.1E-10 T 15-10-2018 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type Reactome: R-HSA-3238698 AM378_00525 c30787c1739dbb7367efdd1c37496605 240 Hamap MF_00575 UDP-2,3-diacylglucosamine hydrolase [lpxH]. 1 240 134.031 T 15-10-2018 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54 AM378_16945 bc60e42dfaf3e900504315a981ecb241 306 Hamap MF_01942 Lipid A biosynthesis lauroyltransferase [lpxL]. 4 306 50.543 T 15-10-2018 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 AM378_16945 bc60e42dfaf3e900504315a981ecb241 306 Hamap MF_01943 Lipid A biosynthesis palmitoleoyltransferase [lpxP]. 3 306 69.001 T 15-10-2018 IPR030857 Lipid A biosynthesis palmitoleoyltransferase, LpxP GO:0008951|GO:0009409|GO:0036104 AM378_16945 bc60e42dfaf3e900504315a981ecb241 306 TIGRFAM TIGR02207 lipid_A_htrB: lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase 6 306 3.1E-137 T 15-10-2018 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 AM378_16945 bc60e42dfaf3e900504315a981ecb241 306 PIRSF PIRSF026649 2 306 4.3E-97 T 15-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 AM378_16945 bc60e42dfaf3e900504315a981ecb241 306 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 5 297 1.5E-100 T 15-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 AM378_04560 a8df20c522ed932bd99c5c80dce0ff8f 138 Pfam PF04234 CopC domain 41 137 3.5E-24 T 15-10-2018 IPR007348 CopC domain GO:0005507|GO:0042597|GO:0046688 AM378_04560 a8df20c522ed932bd99c5c80dce0ff8f 138 SUPERFAMILY SSF81296 40 138 4.34E-26 T 15-10-2018 IPR014756 Immunoglobulin E-set AM378_04560 a8df20c522ed932bd99c5c80dce0ff8f 138 Gene3D G3DSA:2.60.40.1220 41 138 1.6E-27 T 15-10-2018 AM378_05015 62cf7b50166da93e33a3c2e92afe1e70 366 TIGRFAM TIGR00420 trmU: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 7 361 2.0E-156 T 15-10-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 AM378_05015 62cf7b50166da93e33a3c2e92afe1e70 366 Pfam PF03054 tRNA methyl transferase 7 361 2.0E-144 T 15-10-2018 AM378_05015 62cf7b50166da93e33a3c2e92afe1e70 366 Gene3D G3DSA:2.30.30.280 214 282 1.1E-28 T 15-10-2018 IPR023382 Adenine nucleotide alpha hydrolase-like domains GO:0016783 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 AM378_05015 62cf7b50166da93e33a3c2e92afe1e70 366 Gene3D G3DSA:2.40.30.10 283 366 2.4E-34 T 15-10-2018 AM378_05015 62cf7b50166da93e33a3c2e92afe1e70 366 Hamap MF_00144 tRNA-specific 2-thiouridylase MnmA [mnmA]. 7 362 41.186 T 15-10-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 AM378_05015 62cf7b50166da93e33a3c2e92afe1e70 366 SUPERFAMILY SSF52402 5 296 4.63E-59 T 15-10-2018 AM378_05015 62cf7b50166da93e33a3c2e92afe1e70 366 Gene3D G3DSA:3.40.50.620 1 212 2.9E-97 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM378_19695 c8705a64f56b9c2a0d99ad06a37bf35f 208 Pfam PF01810 LysE type translocator 16 196 1.1E-14 T 15-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AM378_19780 6248e3d28e82567acd5454862bbe3ff0 257 Gene3D G3DSA:2.40.30.10 70 121 5.3E-15 T 15-10-2018 AM378_19780 6248e3d28e82567acd5454862bbe3ff0 257 Gene3D G3DSA:2.40.30.10 7 69 8.7E-8 T 15-10-2018 AM378_19780 6248e3d28e82567acd5454862bbe3ff0 257 Gene3D G3DSA:3.40.50.80 126 256 3.5E-27 T 15-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AM378_19780 6248e3d28e82567acd5454862bbe3ff0 257 Pfam PF04954 Siderophore-interacting protein 130 249 9.2E-25 T 15-10-2018 IPR007037 Siderophore-interacting protein, C-terminal domain AM378_19780 6248e3d28e82567acd5454862bbe3ff0 257 Pfam PF08021 Siderophore-interacting FAD-binding domain 66 118 9.4E-14 T 15-10-2018 IPR013113 FAD-binding 9, siderophore-interacting AM378_19780 6248e3d28e82567acd5454862bbe3ff0 257 SUPERFAMILY SSF63380 16 121 3.4E-13 T 15-10-2018 IPR017938 Riboflavin synthase-like beta-barrel AM378_05990 dd11a2d5cb1422dd3dc85b8bc799c28e 504 Pfam PF00854 POT family 89 445 1.2E-87 T 15-10-2018 IPR000109 Proton-dependent oligopeptide transporter family GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-427975 AM378_05990 dd11a2d5cb1422dd3dc85b8bc799c28e 504 SUPERFAMILY SSF103473 19 492 1.96E-30 T 15-10-2018 IPR036259 MFS transporter superfamily AM378_05990 dd11a2d5cb1422dd3dc85b8bc799c28e 504 TIGRFAM TIGR00924 yjdL_sub1_fam: amino acid/peptide transporter (Peptide:H+ symporter) 17 485 8.4E-139 T 15-10-2018 IPR005279 Dipeptide/tripeptide permease GO:0015833|GO:0016020|GO:1904680 AM378_05990 dd11a2d5cb1422dd3dc85b8bc799c28e 504 Gene3D G3DSA:1.20.1250.20 11 486 2.3E-111 T 15-10-2018 AM378_05990 dd11a2d5cb1422dd3dc85b8bc799c28e 504 Hamap MF_01878 Dipeptide and tripeptide permease A [dtpA]. 1 489 54.006 T 15-10-2018 IPR023517 Amino acid/peptide transporter family, dipeptide and tripeptide permease A GO:0006857|GO:0016020|GO:1904680 AM378_05990 dd11a2d5cb1422dd3dc85b8bc799c28e 504 ProSitePatterns PS01023 PTR2 family proton/oligopeptide symporters signature 2. 152 164 - T 15-10-2018 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: R-HSA-427975 AM378_05990 dd11a2d5cb1422dd3dc85b8bc799c28e 504 ProSitePatterns PS01022 PTR2 family proton/oligopeptide symporters signature 1. 77 101 - T 15-10-2018 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: R-HSA-427975 AM378_04860 1a2969efd1561006f26d46d44bfaf2b3 161 SUPERFAMILY SSF143744 13 152 1.44E-25 T 15-10-2018 IPR038084 GlcG-like domain superfamily AM378_04860 1a2969efd1561006f26d46d44bfaf2b3 161 PIRSF PIRSF008757 1 160 1.8E-57 T 15-10-2018 IPR010371 Uncharacterised protein family UPF0303 AM378_04860 1a2969efd1561006f26d46d44bfaf2b3 161 Pfam PF03928 Haem-degrading 22 148 1.1E-30 T 15-10-2018 IPR005624 Haem-degrading AM378_04860 1a2969efd1561006f26d46d44bfaf2b3 161 Gene3D G3DSA:3.30.450.150 1 157 6.7E-51 T 15-10-2018 IPR038084 GlcG-like domain superfamily AM378_04860 1a2969efd1561006f26d46d44bfaf2b3 161 Hamap MF_00761 UPF0303 protein . 4 155 32.98 T 15-10-2018 IPR010371 Uncharacterised protein family UPF0303 AM378_07610 40cb80caa1708252bd8178c9d37b70cc 201 Hamap MF_01216 FMN-dependent NADH-azoreductase [azoR]. 2 199 32.546 T 15-10-2018 IPR023048 NADH-azoreductase, FMN-dependent GO:0016661|GO:0055114 AM378_07610 40cb80caa1708252bd8178c9d37b70cc 201 Gene3D G3DSA:3.40.50.360 1 201 2.7E-66 T 15-10-2018 IPR029039 Flavoprotein-like superfamily AM378_07610 40cb80caa1708252bd8178c9d37b70cc 201 Pfam PF02525 Flavodoxin-like fold 3 195 6.1E-47 T 15-10-2018 IPR003680 Flavodoxin-like fold AM378_07610 40cb80caa1708252bd8178c9d37b70cc 201 SUPERFAMILY SSF52218 1 199 6.54E-59 T 15-10-2018 IPR029039 Flavoprotein-like superfamily AM378_21255 91a982df87c0d550ae8578e6e32db3bb 323 Pfam PF00348 Polyprenyl synthetase 31 262 1.1E-75 T 15-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 AM378_21255 91a982df87c0d550ae8578e6e32db3bb 323 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 81 95 - T 15-10-2018 IPR033749 Polyprenyl synthetase, conserved site AM378_21255 91a982df87c0d550ae8578e6e32db3bb 323 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 203 215 - T 15-10-2018 IPR033749 Polyprenyl synthetase, conserved site AM378_21255 91a982df87c0d550ae8578e6e32db3bb 323 Gene3D G3DSA:1.10.600.10 1 323 1.6E-126 T 15-10-2018 IPR008949 Isoprenoid synthase domain superfamily AM378_21255 91a982df87c0d550ae8578e6e32db3bb 323 SUPERFAMILY SSF48576 5 322 1.76E-100 T 15-10-2018 IPR008949 Isoprenoid synthase domain superfamily AM378_18840 6c3a4b81f1e2393490ad87d5506ff660 339 Gene3D G3DSA:1.10.1040.10 193 339 1.6E-53 T 15-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AM378_18840 6c3a4b81f1e2393490ad87d5506ff660 339 Gene3D G3DSA:3.40.50.720 2 191 3.3E-55 T 15-10-2018 AM378_18840 6c3a4b81f1e2393490ad87d5506ff660 339 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 60 87 2.8E-42 T 15-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 AM378_18840 6c3a4b81f1e2393490ad87d5506ff660 339 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 136 156 2.8E-42 T 15-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 AM378_18840 6c3a4b81f1e2393490ad87d5506ff660 339 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 202 226 2.8E-42 T 15-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 AM378_18840 6c3a4b81f1e2393490ad87d5506ff660 339 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 10 27 2.8E-42 T 15-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 AM378_18840 6c3a4b81f1e2393490ad87d5506ff660 339 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 177 201 2.8E-42 T 15-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 AM378_18840 6c3a4b81f1e2393490ad87d5506ff660 339 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 242 259 2.8E-42 T 15-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 AM378_18840 6c3a4b81f1e2393490ad87d5506ff660 339 Hamap MF_00394 Glycerol-3-phosphate dehydrogenase [NAD(P)+] [gpsA]. 6 326 38.196 T 15-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 AM378_18840 6c3a4b81f1e2393490ad87d5506ff660 339 Pfam PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 8 163 5.7E-50 T 15-10-2018 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GO:0016616|GO:0046168|GO:0051287|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 AM378_18840 6c3a4b81f1e2393490ad87d5506ff660 339 ProSitePatterns PS00957 NAD-dependent glycerol-3-phosphate dehydrogenase signature. 192 213 - T 15-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 AM378_18840 6c3a4b81f1e2393490ad87d5506ff660 339 SUPERFAMILY SSF51735 8 182 1.52E-52 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily AM378_18840 6c3a4b81f1e2393490ad87d5506ff660 339 SUPERFAMILY SSF48179 184 335 9.64E-58 T 15-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 AM378_18840 6c3a4b81f1e2393490ad87d5506ff660 339 Pfam PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 184 323 1.7E-53 T 15-10-2018 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal GO:0004367|GO:0005975|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 AM378_18840 6c3a4b81f1e2393490ad87d5506ff660 339 PIRSF PIRSF000114 1 336 4.9E-100 T 15-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 AM378_03490 72f3d485f5512f7d7ff01041b186d1ad 94 TIGRFAM TIGR00988 hip: integration host factor, beta subunit 1 93 3.2E-52 T 15-10-2018 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 AM378_03490 72f3d485f5512f7d7ff01041b186d1ad 94 SUPERFAMILY SSF47729 1 91 1.91E-29 T 15-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 AM378_03490 72f3d485f5512f7d7ff01041b186d1ad 94 Gene3D G3DSA:4.10.520.10 2 39 5.4E-17 T 15-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 AM378_03490 72f3d485f5512f7d7ff01041b186d1ad 94 Gene3D G3DSA:4.10.520.10 40 94 3.9E-33 T 15-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 AM378_03490 72f3d485f5512f7d7ff01041b186d1ad 94 PRINTS PR01727 Prokaryotic integration host factor signature 59 72 5.9E-19 T 15-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AM378_03490 72f3d485f5512f7d7ff01041b186d1ad 94 PRINTS PR01727 Prokaryotic integration host factor signature 75 89 5.9E-19 T 15-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AM378_03490 72f3d485f5512f7d7ff01041b186d1ad 94 PRINTS PR01727 Prokaryotic integration host factor signature 41 56 5.9E-19 T 15-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AM378_03490 72f3d485f5512f7d7ff01041b186d1ad 94 Pfam PF00216 Bacterial DNA-binding protein 1 91 2.9E-29 T 15-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AM378_03490 72f3d485f5512f7d7ff01041b186d1ad 94 Hamap MF_00381 Integration host factor subunit beta [ihfB]. 1 94 30.445 T 15-10-2018 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 AM378_03490 72f3d485f5512f7d7ff01041b186d1ad 94 SMART SM00411 1 91 2.8E-42 T 15-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AM378_03490 72f3d485f5512f7d7ff01041b186d1ad 94 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 47 66 - T 15-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 AM378_08080 4fb7659703c4697e5d5916e51a1d5527 206 Pfam PF01300 Telomere recombination 22 198 2.3E-46 T 15-10-2018 IPR006070 YrdC-like domain GO:0003725 AM378_08080 4fb7659703c4697e5d5916e51a1d5527 206 SUPERFAMILY SSF55821 1 203 9.77E-66 T 15-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily AM378_08080 4fb7659703c4697e5d5916e51a1d5527 206 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 7 200 7.5E-74 T 15-10-2018 IPR006070 YrdC-like domain GO:0003725 AM378_08080 4fb7659703c4697e5d5916e51a1d5527 206 Gene3D G3DSA:3.90.870.10 1 206 9.2E-69 T 15-10-2018 AM378_19085 71d10860324d47a0792ecea70b7de45b 196 Gene3D G3DSA:3.40.50.1000 4 182 4.0E-62 T 15-10-2018 IPR023214 HAD superfamily AM378_19085 71d10860324d47a0792ecea70b7de45b 196 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 128 144 3.8E-6 T 15-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AM378_19085 71d10860324d47a0792ecea70b7de45b 196 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 96 109 3.8E-6 T 15-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AM378_19085 71d10860324d47a0792ecea70b7de45b 196 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 146 166 3.8E-6 T 15-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AM378_19085 71d10860324d47a0792ecea70b7de45b 196 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 173 186 3.8E-6 T 15-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AM378_19085 71d10860324d47a0792ecea70b7de45b 196 SUPERFAMILY SSF56784 3 191 1.44E-42 T 15-10-2018 IPR036412 HAD-like superfamily AM378_19085 71d10860324d47a0792ecea70b7de45b 196 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 69 184 1.0E-16 T 15-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AM378_19085 71d10860324d47a0792ecea70b7de45b 196 Pfam PF13419 Haloacid dehalogenase-like hydrolase 79 184 2.2E-9 T 15-10-2018 AM378_19085 71d10860324d47a0792ecea70b7de45b 196 Gene3D G3DSA:1.10.150.240 16 81 4.0E-62 T 15-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 AM378_13335 a2ea02a33646064966b4312b343b9d64 324 SMART SM00530 18 79 3.9E-5 T 15-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM378_13335 a2ea02a33646064966b4312b343b9d64 324 Pfam PF13464 Domain of unknown function (DUF4115) 247 321 2.1E-24 T 15-10-2018 IPR025194 Domain of unknown function DUF4115 AM378_13335 a2ea02a33646064966b4312b343b9d64 324 Gene3D G3DSA:1.10.260.40 4 111 4.6E-21 T 15-10-2018 AM378_13335 a2ea02a33646064966b4312b343b9d64 324 SUPERFAMILY SSF47413 11 80 2.95E-9 T 15-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AM378_13335 a2ea02a33646064966b4312b343b9d64 324 Pfam PF13413 Helix-turn-helix domain 18 79 7.2E-16 T 15-10-2018 AM378_13335 a2ea02a33646064966b4312b343b9d64 324 Hamap MF_02017 Cytoskeleton protein RodZ [rodZ]. 1 324 44.593 T 15-10-2018 IPR023690 Cytoskeleton protein RodZ GO:0008360|GO:0016021 AM378_14930 0d3d8c165f119a6e97c476ea1b5c6b25 302 SUPERFAMILY SSF53067 2 294 4.47E-41 T 15-10-2018 AM378_14930 0d3d8c165f119a6e97c476ea1b5c6b25 302 Gene3D G3DSA:3.30.420.40 108 298 6.7E-48 T 15-10-2018 AM378_14930 0d3d8c165f119a6e97c476ea1b5c6b25 302 Gene3D G3DSA:3.30.420.40 2 106 5.0E-17 T 15-10-2018 AM378_14930 0d3d8c165f119a6e97c476ea1b5c6b25 302 Pfam PF00480 ROK family 6 291 1.4E-48 T 15-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 AM378_09790 6951802048f0cd5a6ed3c4c3c427da15 290 Pfam PF01739 CheR methyltransferase, SAM binding domain 95 282 2.2E-56 T 15-10-2018 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal AM378_09790 6951802048f0cd5a6ed3c4c3c427da15 290 SUPERFAMILY SSF53335 95 284 8.07E-58 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM378_09790 6951802048f0cd5a6ed3c4c3c427da15 290 Gene3D G3DSA:1.10.155.10 14 93 8.8E-33 T 15-10-2018 IPR036804 Chemotaxis receptor methyltransferase CheR, N-terminal domain superfamily AM378_09790 6951802048f0cd5a6ed3c4c3c427da15 290 Gene3D G3DSA:3.40.50.150 94 287 2.7E-69 T 15-10-2018 AM378_09790 6951802048f0cd5a6ed3c4c3c427da15 290 PRINTS PR00996 Glutamate methyltransferase family signature 121 141 1.8E-45 T 15-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AM378_09790 6951802048f0cd5a6ed3c4c3c427da15 290 PRINTS PR00996 Glutamate methyltransferase family signature 155 171 1.8E-45 T 15-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AM378_09790 6951802048f0cd5a6ed3c4c3c427da15 290 PRINTS PR00996 Glutamate methyltransferase family signature 246 269 1.8E-45 T 15-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AM378_09790 6951802048f0cd5a6ed3c4c3c427da15 290 PRINTS PR00996 Glutamate methyltransferase family signature 49 62 1.8E-45 T 15-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AM378_09790 6951802048f0cd5a6ed3c4c3c427da15 290 PRINTS PR00996 Glutamate methyltransferase family signature 227 241 1.8E-45 T 15-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AM378_09790 6951802048f0cd5a6ed3c4c3c427da15 290 PRINTS PR00996 Glutamate methyltransferase family signature 88 100 1.8E-45 T 15-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AM378_09790 6951802048f0cd5a6ed3c4c3c427da15 290 PIRSF PIRSF000410 9 288 3.5E-98 T 15-10-2018 IPR026024 Chemotaxis protein methyltransferase CheR AM378_09790 6951802048f0cd5a6ed3c4c3c427da15 290 SMART SM00138 27 287 7.3E-116 T 15-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AM378_09790 6951802048f0cd5a6ed3c4c3c427da15 290 SUPERFAMILY SSF47757 16 94 5.89E-25 T 15-10-2018 AM378_09790 6951802048f0cd5a6ed3c4c3c427da15 290 Pfam PF03705 CheR methyltransferase, all-alpha domain 29 80 6.7E-19 T 15-10-2018 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal AM378_18060 212fc7ec507f6deb47f99b2bba64870d 728 Gene3D G3DSA:3.20.20.80 230 612 1.6E-174 T 15-10-2018 AM378_18060 212fc7ec507f6deb47f99b2bba64870d 728 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 125 207 6.3E-25 T 15-10-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 AM378_18060 212fc7ec507f6deb47f99b2bba64870d 728 SUPERFAMILY SSF81296 117 223 2.27E-36 T 15-10-2018 IPR014756 Immunoglobulin E-set AM378_18060 212fc7ec507f6deb47f99b2bba64870d 728 Gene3D G3DSA:2.60.40.1180 623 727 5.1E-39 T 15-10-2018 IPR013780 Glycosyl hydrolase, all-beta AM378_18060 212fc7ec507f6deb47f99b2bba64870d 728 Hamap MF_00685 1,4-alpha-glucan branching enzyme GlgB [glgB]. 101 726 43.487 T 15-10-2018 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 AM378_18060 212fc7ec507f6deb47f99b2bba64870d 728 SUPERFAMILY SSF51011 623 725 5.28E-34 T 15-10-2018 AM378_18060 212fc7ec507f6deb47f99b2bba64870d 728 PIRSF PIRSF000463 6 728 2.0E-282 T 15-10-2018 IPR037439 1,4-alpha-glucan-branching enzyme GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900|Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 AM378_18060 212fc7ec507f6deb47f99b2bba64870d 728 TIGRFAM TIGR01515 branching_enzym: 1,4-alpha-glucan branching enzyme 109 723 5.2E-301 T 15-10-2018 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 AM378_18060 212fc7ec507f6deb47f99b2bba64870d 728 SUPERFAMILY SSF81296 16 115 5.25E-18 T 15-10-2018 IPR014756 Immunoglobulin E-set AM378_18060 212fc7ec507f6deb47f99b2bba64870d 728 Pfam PF02806 Alpha amylase, C-terminal all-beta domain 628 724 6.5E-20 T 15-10-2018 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 AM378_18060 212fc7ec507f6deb47f99b2bba64870d 728 Pfam PF00128 Alpha amylase, catalytic domain 273 341 2.0E-10 T 15-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AM378_18060 212fc7ec507f6deb47f99b2bba64870d 728 Gene3D G3DSA:2.60.40.10 3 221 1.2E-77 T 15-10-2018 IPR013783 Immunoglobulin-like fold AM378_18060 212fc7ec507f6deb47f99b2bba64870d 728 SMART SM00642 247 596 1.9E-7 T 15-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AM378_18060 212fc7ec507f6deb47f99b2bba64870d 728 SUPERFAMILY SSF51445 232 621 1.02E-114 T 15-10-2018 IPR017853 Glycoside hydrolase superfamily AM378_15200 3354ba0b39b0d3623f1920ea8bb9a9ef 356 Gene3D G3DSA:3.40.50.300 1 244 2.0E-75 T 15-10-2018 AM378_15200 3354ba0b39b0d3623f1920ea8bb9a9ef 356 SMART SM00382 28 217 2.8E-16 T 15-10-2018 IPR003593 AAA+ ATPase domain AM378_15200 3354ba0b39b0d3623f1920ea8bb9a9ef 356 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM378_15200 3354ba0b39b0d3623f1920ea8bb9a9ef 356 Pfam PF00005 ABC transporter 19 167 9.2E-36 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM378_15200 3354ba0b39b0d3623f1920ea8bb9a9ef 356 SUPERFAMILY SSF52540 4 248 1.46E-81 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_15200 3354ba0b39b0d3623f1920ea8bb9a9ef 356 SUPERFAMILY SSF50331 243 340 2.21E-7 T 15-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal AM378_14560 40f5c3b18d269825ac39e83cc0aed727 339 Gene3D G3DSA:3.40.50.2300 63 302 2.4E-71 T 15-10-2018 AM378_14560 40f5c3b18d269825ac39e83cc0aed727 339 SUPERFAMILY SSF47413 1 59 2.04E-17 T 15-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AM378_14560 40f5c3b18d269825ac39e83cc0aed727 339 Gene3D G3DSA:3.40.50.2300 159 289 2.4E-71 T 15-10-2018 AM378_14560 40f5c3b18d269825ac39e83cc0aed727 339 Gene3D G3DSA:1.10.260.40 3 59 5.2E-23 T 15-10-2018 AM378_14560 40f5c3b18d269825ac39e83cc0aed727 339 SMART SM00354 1 71 5.4E-37 T 15-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM378_14560 40f5c3b18d269825ac39e83cc0aed727 339 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 2.6E-7 T 15-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM378_14560 40f5c3b18d269825ac39e83cc0aed727 339 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 2.6E-7 T 15-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM378_14560 40f5c3b18d269825ac39e83cc0aed727 339 Pfam PF13377 Periplasmic binding protein-like domain 168 329 4.6E-33 T 15-10-2018 AM378_14560 40f5c3b18d269825ac39e83cc0aed727 339 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 15-10-2018 AM378_14560 40f5c3b18d269825ac39e83cc0aed727 339 SUPERFAMILY SSF53822 61 331 2.16E-83 T 15-10-2018 IPR028082 Periplasmic binding protein-like I AM378_14560 40f5c3b18d269825ac39e83cc0aed727 339 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 5.4E-21 T 15-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM378_17995 e144a5ec5e3aa74181625a64504fb8a1 155 Gene3D G3DSA:3.40.930.10 1 154 5.0E-52 T 15-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 AM378_17995 e144a5ec5e3aa74181625a64504fb8a1 155 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 7 149 2.4E-30 T 15-10-2018 IPR002178 PTS EIIA type-2 domain AM378_17995 e144a5ec5e3aa74181625a64504fb8a1 155 SUPERFAMILY SSF55804 6 149 7.98E-34 T 15-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 AM378_16615 f6d59962ad2299ef10abf19543076016 260 TIGRFAM TIGR00056 TIGR00056: ABC transport permease subunit 5 258 2.8E-104 T 15-10-2018 IPR003453 ABC transport permease subunit MlaE, Proteobacteria AM378_16615 f6d59962ad2299ef10abf19543076016 260 Pfam PF02405 Permease MlaE 45 256 7.9E-76 T 15-10-2018 IPR030802 ABC transporter permease MalE GO:0043190 AM378_00405 223d1a71f03d0b04f2a944a49b6568dd 161 Pfam PF04115 Ureidoglycolate lyase 3 158 2.6E-43 T 15-10-2018 IPR007247 Ureidoglycolate lyase GO:0000256|GO:0050385 KEGG: 00230+4.3.2.3|MetaCyc: PWY-5694|MetaCyc: PWY-5705 AM378_00405 223d1a71f03d0b04f2a944a49b6568dd 161 SUPERFAMILY SSF51182 3 151 1.96E-51 T 15-10-2018 IPR011051 RmlC-like cupin domain superfamily AM378_00405 223d1a71f03d0b04f2a944a49b6568dd 161 PIRSF PIRSF017306 1 159 5.9E-62 T 15-10-2018 IPR007247 Ureidoglycolate lyase GO:0000256|GO:0050385 KEGG: 00230+4.3.2.3|MetaCyc: PWY-5694|MetaCyc: PWY-5705 AM378_00405 223d1a71f03d0b04f2a944a49b6568dd 161 Gene3D G3DSA:2.60.120.480 1 160 3.7E-55 T 15-10-2018 IPR024060 Ureidoglycolate lyase domain superfamily GO:0004848 KEGG: 00230+4.3.2.3|MetaCyc: PWY-5694|MetaCyc: PWY-5705 AM378_13405 f7a18502c06c24f768d044ed4cf20d17 244 Pfam PF00588 SpoU rRNA Methylase family 5 154 1.3E-33 T 15-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 AM378_13405 f7a18502c06c24f768d044ed4cf20d17 244 TIGRFAM TIGR00050 rRNA_methyl_1: RNA methyltransferase, TrmH family, group 1 1 238 3.9E-88 T 15-10-2018 IPR004384 RNA methyltransferase TrmJ/LasT GO:0006396|GO:0008173 AM378_13405 f7a18502c06c24f768d044ed4cf20d17 244 Gene3D G3DSA:1.10.8.590 167 244 1.2E-33 T 15-10-2018 AM378_13405 f7a18502c06c24f768d044ed4cf20d17 244 PIRSF PIRSF004808 1 243 3.2E-77 T 15-10-2018 IPR004384 RNA methyltransferase TrmJ/LasT GO:0006396|GO:0008173 AM378_13405 f7a18502c06c24f768d044ed4cf20d17 244 SUPERFAMILY SSF75217 3 165 3.53E-39 T 15-10-2018 IPR029028 Alpha/beta knot methyltransferases AM378_13405 f7a18502c06c24f768d044ed4cf20d17 244 Gene3D G3DSA:3.40.1280.10 1 164 7.0E-66 T 15-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AM378_12675 a587d86e4e7cf47f0cd99a760e3d1cd0 151 Hamap MF_00489 UPF0178 protein YaiI [yaiI]. 1 147 33.057 T 15-10-2018 IPR003791 Protein of unknown function UPF0178 AM378_12675 a587d86e4e7cf47f0cd99a760e3d1cd0 151 Pfam PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 18 144 3.8E-51 T 15-10-2018 IPR003791 Protein of unknown function UPF0178 AM378_20640 d1b56132bf266685a09e4f7bf0a0c484 148 SUPERFAMILY SSF55729 5 136 5.23E-22 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase AM378_20640 d1b56132bf266685a09e4f7bf0a0c484 148 Pfam PF00583 Acetyltransferase (GNAT) family 40 128 1.9E-15 T 15-10-2018 IPR000182 GNAT domain AM378_20640 d1b56132bf266685a09e4f7bf0a0c484 148 Gene3D G3DSA:3.40.630.30 3 139 7.1E-19 T 15-10-2018 AM378_09350 c38e6a37507f31f1af909311cccbe49a 213 Gene3D G3DSA:2.40.50.230 2 89 9.6E-33 T 15-10-2018 IPR037026 Vgr protein, OB-fold domain superfamily AM378_09350 c38e6a37507f31f1af909311cccbe49a 213 TIGRFAM TIGR01644 phage_P2_V: phage baseplate assembly protein V 10 211 1.5E-62 T 15-10-2018 IPR013046 Phage baseplate assembly protein V/Gp45 AM378_09350 c38e6a37507f31f1af909311cccbe49a 213 Pfam PF04717 Type VI secretion system, phage-baseplate injector 9 119 5.6E-44 T 15-10-2018 IPR006531 Gp5 N-terminal AM378_09350 c38e6a37507f31f1af909311cccbe49a 213 Gene3D G3DSA:2.60.220.40 91 163 2.2E-29 T 15-10-2018 AM378_03375 ca5b9aa568b5d10bccf551e7d1a6415d 106 Hamap MF_00302 ATP-dependent Clp protease adapter protein ClpS [clpS]. 14 101 28.159 T 15-10-2018 IPR022935 ATP-dependent Clp protease adaptor protein ClpS AM378_03375 ca5b9aa568b5d10bccf551e7d1a6415d 106 SUPERFAMILY SSF54736 22 105 5.02E-33 T 15-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like AM378_03375 ca5b9aa568b5d10bccf551e7d1a6415d 106 Pfam PF02617 ATP-dependent Clp protease adaptor protein ClpS 23 102 2.9E-33 T 15-10-2018 IPR003769 Adaptor protein ClpS, core GO:0030163 Reactome: R-HSA-983168 AM378_03375 ca5b9aa568b5d10bccf551e7d1a6415d 106 Gene3D G3DSA:3.30.1390.10 1 106 1.4E-46 T 15-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like AM378_10945 ae42af979b774fb2a8d600487002cf49 429 Pfam PF13372 Alginate export 38 414 2.3E-78 T 15-10-2018 IPR025388 Alginate export domain AM378_16245 37a949608dad49205c8185f54726c636 360 Pfam PF06616 BsuBI/PstI restriction endonuclease C-terminus 55 352 1.2E-78 T 15-10-2018 IPR009528 Restriction endonuclease, type II, BsuBI/PstI, C-terminal GO:0000287|GO:0003677|GO:0009036|GO:0009307 AM378_16245 37a949608dad49205c8185f54726c636 360 Gene3D G3DSA:3.40.1350.80 187 354 1.5E-48 T 15-10-2018 AM378_11350 74332d5886852997c2ac0146e532d8e7 377 Gene3D G3DSA:3.30.1340.10 285 370 1.1E-25 T 15-10-2018 IPR035895 HPr-like superfamily AM378_11350 74332d5886852997c2ac0146e532d8e7 377 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 286 368 3.9E-21 T 15-10-2018 IPR000032 Phosphocarrier protein HPr-like AM378_11350 74332d5886852997c2ac0146e532d8e7 377 SUPERFAMILY SSF55594 287 375 5.89E-24 T 15-10-2018 IPR035895 HPr-like superfamily AM378_11350 74332d5886852997c2ac0146e532d8e7 377 Pfam PF00381 PTS HPr component phosphorylation site 287 369 7.1E-24 T 15-10-2018 IPR000032 Phosphocarrier protein HPr-like AM378_11350 74332d5886852997c2ac0146e532d8e7 377 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 47 63 - T 15-10-2018 IPR002178 PTS EIIA type-2 domain AM378_11350 74332d5886852997c2ac0146e532d8e7 377 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 4 139 4.0E-29 T 15-10-2018 IPR002178 PTS EIIA type-2 domain AM378_11350 74332d5886852997c2ac0146e532d8e7 377 PRINTS PR00107 Phosphocarrier protein signature 297 313 7.0E-17 T 15-10-2018 IPR000032 Phosphocarrier protein HPr-like AM378_11350 74332d5886852997c2ac0146e532d8e7 377 PRINTS PR00107 Phosphocarrier protein signature 325 340 7.0E-17 T 15-10-2018 IPR000032 Phosphocarrier protein HPr-like AM378_11350 74332d5886852997c2ac0146e532d8e7 377 PRINTS PR00107 Phosphocarrier protein signature 340 357 7.0E-17 T 15-10-2018 IPR000032 Phosphocarrier protein HPr-like AM378_11350 74332d5886852997c2ac0146e532d8e7 377 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 326 341 - T 15-10-2018 IPR002114 Phosphotransferase system, HPr serine phosphorylation site AM378_11350 74332d5886852997c2ac0146e532d8e7 377 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 297 304 - T 15-10-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site AM378_11350 74332d5886852997c2ac0146e532d8e7 377 Gene3D G3DSA:3.40.930.10 1 142 2.3E-40 T 15-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 AM378_11350 74332d5886852997c2ac0146e532d8e7 377 SUPERFAMILY SSF55804 2 140 2.09E-39 T 15-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 AM378_11350 74332d5886852997c2ac0146e532d8e7 377 SUPERFAMILY SSF55804 148 276 1.62E-12 T 15-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 AM378_21920 83f39eb3b360751eb6d178bc400bb222 217 TIGRFAM TIGR02428 pcaJ_scoB_fam: 3-oxoacid CoA-transferase, B subunit 3 207 5.8E-99 T 15-10-2018 IPR012791 3-oxoacid CoA-transferase, subunit B GO:0008410 Reactome: R-HSA-77108 AM378_21920 83f39eb3b360751eb6d178bc400bb222 217 SUPERFAMILY SSF100950 3 216 3.11E-74 T 15-10-2018 IPR037171 NagB/RpiA transferase-like AM378_21920 83f39eb3b360751eb6d178bc400bb222 217 SMART SM00882 5 201 4.6E-73 T 15-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 AM378_21920 83f39eb3b360751eb6d178bc400bb222 217 ProSitePatterns PS01274 Coenzyme A transferases signature 2. 43 51 - T 15-10-2018 IPR004164 Coenzyme A transferase active site GO:0008410 Reactome: R-HSA-77108 AM378_21920 83f39eb3b360751eb6d178bc400bb222 217 Pfam PF01144 Coenzyme A transferase 5 200 5.2E-41 T 15-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 AM378_21920 83f39eb3b360751eb6d178bc400bb222 217 Gene3D G3DSA:3.40.1080.10 1 212 1.9E-93 T 15-10-2018 AM378_09995 a576d1e1d1ca7dd8f956cb6f860587fb 267 SUPERFAMILY SSF144059 2 265 1.16E-78 T 15-10-2018 AM378_09995 a576d1e1d1ca7dd8f956cb6f860587fb 267 Pfam PF07024 ImpE protein 143 261 2.2E-43 T 15-10-2018 IPR009211 Predicted virulence protein, SciE type AM378_09995 a576d1e1d1ca7dd8f956cb6f860587fb 267 PIRSF PIRSF029288 1 267 8.5E-78 T 15-10-2018 IPR009211 Predicted virulence protein, SciE type AM378_09995 a576d1e1d1ca7dd8f956cb6f860587fb 267 Gene3D G3DSA:1.25.40.10 1 81 8.4E-16 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AM378_02770 b7a4dd047af48a43ee53242f22eb1d37 353 Gene3D G3DSA:3.40.50.2000 170 335 1.9E-36 T 15-10-2018 AM378_02770 b7a4dd047af48a43ee53242f22eb1d37 353 Pfam PF00534 Glycosyl transferases group 1 170 327 1.4E-29 T 15-10-2018 IPR001296 Glycosyl transferase, family 1 AM378_02770 b7a4dd047af48a43ee53242f22eb1d37 353 Gene3D G3DSA:3.40.50.2000 6 169 2.2E-10 T 15-10-2018 AM378_02770 b7a4dd047af48a43ee53242f22eb1d37 353 SUPERFAMILY SSF53756 10 348 1.83E-66 T 15-10-2018 AM378_02770 b7a4dd047af48a43ee53242f22eb1d37 353 Pfam PF13439 Glycosyltransferase Family 4 15 163 6.6E-9 T 15-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 AM378_12140 af63135964d397eef6340df4f9436601 176 SMART SM00463 95 173 2.9E-20 T 15-10-2018 IPR002625 Smr domain AM378_12140 af63135964d397eef6340df4f9436601 176 Gene3D G3DSA:3.30.1370.110 50 175 3.1E-26 T 15-10-2018 AM378_12140 af63135964d397eef6340df4f9436601 176 SUPERFAMILY SSF160443 96 150 4.18E-9 T 15-10-2018 IPR036063 Smr domain superfamily AM378_12140 af63135964d397eef6340df4f9436601 176 Pfam PF01713 Smr domain 98 169 3.8E-17 T 15-10-2018 IPR002625 Smr domain AM378_12140 af63135964d397eef6340df4f9436601 176 Hamap MF_01042 UPF0115 protein YfcN [yfcN]. 1 174 40.259 T 15-10-2018 IPR022990 Uncharacterised protein family UPF0115 AM378_07955 7ab8ca4d1b1f8b017a61ccd9fe5479ec 99 SUPERFAMILY SSF47598 1 46 1.26E-9 T 15-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 AM378_07955 7ab8ca4d1b1f8b017a61ccd9fe5479ec 99 Pfam PF03869 Arc-like DNA binding domain 8 46 2.1E-5 T 15-10-2018 IPR005569 Arc-like DNA binding domain GO:0003677 AM378_07955 7ab8ca4d1b1f8b017a61ccd9fe5479ec 99 Gene3D G3DSA:1.10.1220.10 1 47 9.0E-9 T 15-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 AM378_13640 9cc988608e7162b17bb184eda4c9f8cb 259 Hamap MF_01872 tRNA1(Val) (adenine(37)-N6)-methyltransferase [yfiC]. 25 259 55.33 T 15-10-2018 IPR022882 tRNA1(Val) (adenine(37)-N6)-methyltransferase GO:0016430 AM378_13640 9cc988608e7162b17bb184eda4c9f8cb 259 Gene3D G3DSA:3.40.50.150 24 255 2.1E-59 T 15-10-2018 AM378_13640 9cc988608e7162b17bb184eda4c9f8cb 259 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 130 142 2.9E-5 T 15-10-2018 AM378_13640 9cc988608e7162b17bb184eda4c9f8cb 259 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 62 76 2.9E-5 T 15-10-2018 AM378_13640 9cc988608e7162b17bb184eda4c9f8cb 259 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 160 184 2.9E-5 T 15-10-2018 AM378_13640 9cc988608e7162b17bb184eda4c9f8cb 259 Pfam PF05175 Methyltransferase small domain 58 190 8.0E-16 T 15-10-2018 IPR007848 Methyltransferase small domain GO:0008168 AM378_13640 9cc988608e7162b17bb184eda4c9f8cb 259 SUPERFAMILY SSF53335 24 201 1.96E-30 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM378_13640 9cc988608e7162b17bb184eda4c9f8cb 259 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 133 139 - T 15-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 AM378_12850 a0d241b8b557d16a96a1934fc4689262 189 SUPERFAMILY SSF55021 6 87 4.96E-17 T 15-10-2018 AM378_12850 a0d241b8b557d16a96a1934fc4689262 189 Gene3D G3DSA:3.30.70.260 4 89 7.0E-26 T 15-10-2018 AM378_12850 a0d241b8b557d16a96a1934fc4689262 189 PIRSF PIRSF028103 5 180 3.0E-65 T 15-10-2018 IPR016867 Glycine cleavage system transcriptional repressor GO:0006355 AM378_12850 a0d241b8b557d16a96a1934fc4689262 189 Pfam PF13740 ACT domain 7 82 8.3E-26 T 15-10-2018 AM378_12850 a0d241b8b557d16a96a1934fc4689262 189 Gene3D G3DSA:3.30.70.260 92 188 4.0E-33 T 15-10-2018 AM378_12850 a0d241b8b557d16a96a1934fc4689262 189 SUPERFAMILY SSF55021 91 179 1.3E-17 T 15-10-2018 AM378_06610 754ae0cd415d93a33178f99cf4f52a77 93 PIRSF PIRSF030798 1 93 3.3E-23 T 15-10-2018 IPR016958 Uncharacterised conserved protein UCP030798 AM378_06610 754ae0cd415d93a33178f99cf4f52a77 93 ProDom PD064934 YJCB MEMBRANE INNER ECS5042 21 92 1.0E-8 T 15-10-2018 IPR016958 Uncharacterised conserved protein UCP030798 AM378_06610 754ae0cd415d93a33178f99cf4f52a77 93 Pfam PF15940 Family of unknown function 1 92 1.6E-41 T 15-10-2018 IPR016958 Uncharacterised conserved protein UCP030798 AM378_23040 3dcb153744660dc2acd44cbfb8f0088a 511 SUPERFAMILY SSF48557 4 506 4.94E-195 T 15-10-2018 IPR008948 L-Aspartase-like GO:0003824 AM378_23040 3dcb153744660dc2acd44cbfb8f0088a 511 Gene3D G3DSA:1.10.275.10 2 197 6.2E-71 T 15-10-2018 IPR024083 Fumarase/histidase, N-terminal AM378_23040 3dcb153744660dc2acd44cbfb8f0088a 511 TIGRFAM TIGR01225 hutH: histidine ammonia-lyase 5 506 6.7E-224 T 15-10-2018 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 AM378_23040 3dcb153744660dc2acd44cbfb8f0088a 511 ProSitePatterns PS00488 Phenylalanine and histidine ammonia-lyases signature. 139 155 - T 15-10-2018 IPR022313 Phenylalanine/histidine ammonia-lyases, active site GO:0016841 Reactome: R-HSA-70921 AM378_23040 3dcb153744660dc2acd44cbfb8f0088a 511 Pfam PF00221 Aromatic amino acid lyase 11 471 3.4E-188 T 15-10-2018 IPR001106 Aromatic amino acid lyase Reactome: R-HSA-70921 AM378_23040 3dcb153744660dc2acd44cbfb8f0088a 511 Hamap MF_00229 Histidine ammonia-lyase [hutH]. 3 504 45.311 T 15-10-2018 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 AM378_23040 3dcb153744660dc2acd44cbfb8f0088a 511 Gene3D G3DSA:1.20.200.10 198 509 1.5E-126 T 15-10-2018 AM378_05815 fa5e817c770ac223aa036301f6103c16 227 SMART SM00479 29 214 3.4E-40 T 15-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III AM378_05815 fa5e817c770ac223aa036301f6103c16 227 SUPERFAMILY SSF53098 20 218 2.14E-58 T 15-10-2018 IPR012337 Ribonuclease H-like superfamily AM378_05815 fa5e817c770ac223aa036301f6103c16 227 Hamap MF_00157 Ribonuclease T [rnt]. 1 227 119.802 T 15-10-2018 IPR005987 Ribonuclease T GO:0004540|GO:0006396 AM378_05815 fa5e817c770ac223aa036301f6103c16 227 Pfam PF00929 Exonuclease 31 205 3.5E-37 T 15-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III AM378_05815 fa5e817c770ac223aa036301f6103c16 227 TIGRFAM TIGR01298 RNaseT: ribonuclease T 21 219 6.8E-107 T 15-10-2018 IPR005987 Ribonuclease T GO:0004540|GO:0006396 AM378_05815 fa5e817c770ac223aa036301f6103c16 227 Gene3D G3DSA:3.30.420.10 20 225 2.7E-59 T 15-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AM378_10525 be505ef52ab8387799e57944c0406451 90 Gene3D G3DSA:1.10.10.10 32 84 2.0E-9 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_12385 93e9eb7bcbba451e13d6c2c33633ebf6 289 Gene3D G3DSA:1.10.10.10 1 85 8.5E-22 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_12385 93e9eb7bcbba451e13d6c2c33633ebf6 289 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 64 5.3E-17 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_12385 93e9eb7bcbba451e13d6c2c33633ebf6 289 SUPERFAMILY SSF46785 6 83 3.2E-18 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM378_12385 93e9eb7bcbba451e13d6c2c33633ebf6 289 SUPERFAMILY SSF53850 90 283 3.12E-25 T 15-10-2018 AM378_12385 93e9eb7bcbba451e13d6c2c33633ebf6 289 Pfam PF03466 LysR substrate binding domain 89 275 1.1E-19 T 15-10-2018 IPR005119 LysR, substrate-binding AM378_12385 93e9eb7bcbba451e13d6c2c33633ebf6 289 Gene3D G3DSA:3.40.190.290 94 263 3.3E-19 T 15-10-2018 AM378_12385 93e9eb7bcbba451e13d6c2c33633ebf6 289 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 6.0E-6 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_12385 93e9eb7bcbba451e13d6c2c33633ebf6 289 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 6.0E-6 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_12385 93e9eb7bcbba451e13d6c2c33633ebf6 289 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 6.0E-6 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_17985 1bec79bd067612833be3d7f7cdf46492 302 Pfam PF01261 Xylose isomerase-like TIM barrel 26 230 3.0E-31 T 15-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain AM378_17985 1bec79bd067612833be3d7f7cdf46492 302 TIGRFAM TIGR00542 hxl6Piso_put: putative hexulose-6-phosphate isomerase 5 280 3.0E-134 T 15-10-2018 IPR004560 L-ribulose-5-phosphate 3-epimerase GO:0005975|GO:0016861 KEGG: 00040+5.1.3.22|KEGG: 00053+5.1.3.22|MetaCyc: PWY-6961 AM378_17985 1bec79bd067612833be3d7f7cdf46492 302 Gene3D G3DSA:3.20.20.150 1 282 3.0E-80 T 15-10-2018 AM378_17985 1bec79bd067612833be3d7f7cdf46492 302 SUPERFAMILY SSF51658 16 270 7.73E-53 T 15-10-2018 IPR036237 Xylose isomerase-like superfamily AM378_12305 3ca60541e0e3b69b414adce455cbcb41 668 TIGRFAM TIGR03938 deacetyl_PgaB: poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB 46 662 9.4E-277 T 15-10-2018 IPR023854 Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB GO:0016810|GO:0043708 AM378_12305 3ca60541e0e3b69b414adce455cbcb41 668 SUPERFAMILY SSF88713 63 316 3.34E-37 T 15-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 AM378_12305 3ca60541e0e3b69b414adce455cbcb41 668 Pfam PF01522 Polysaccharide deacetylase 101 267 2.4E-29 T 15-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 AM378_12305 3ca60541e0e3b69b414adce455cbcb41 668 Gene3D G3DSA:3.20.20.80 305 667 1.1E-146 T 15-10-2018 AM378_12305 3ca60541e0e3b69b414adce455cbcb41 668 Gene3D G3DSA:3.20.20.370 39 304 2.1E-74 T 15-10-2018 AM378_12305 3ca60541e0e3b69b414adce455cbcb41 668 Pfam PF14883 Hypothetical glycosyl hydrolase family 13 315 642 4.2E-151 T 15-10-2018 IPR032772 Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB, C-terminal AM378_15320 a9ccec66e9a2dbb8853e2aaf4dcb6a51 658 PRINTS PR01180 Arginine decarboxylase signature 347 364 1.6E-73 T 15-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 AM378_15320 a9ccec66e9a2dbb8853e2aaf4dcb6a51 658 PRINTS PR01180 Arginine decarboxylase signature 488 509 1.6E-73 T 15-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 AM378_15320 a9ccec66e9a2dbb8853e2aaf4dcb6a51 658 PRINTS PR01180 Arginine decarboxylase signature 116 130 1.6E-73 T 15-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 AM378_15320 a9ccec66e9a2dbb8853e2aaf4dcb6a51 658 PRINTS PR01180 Arginine decarboxylase signature 170 185 1.6E-73 T 15-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 AM378_15320 a9ccec66e9a2dbb8853e2aaf4dcb6a51 658 PRINTS PR01180 Arginine decarboxylase signature 220 242 1.6E-73 T 15-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 AM378_15320 a9ccec66e9a2dbb8853e2aaf4dcb6a51 658 PRINTS PR01180 Arginine decarboxylase signature 196 217 1.6E-73 T 15-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 AM378_15320 a9ccec66e9a2dbb8853e2aaf4dcb6a51 658 PRINTS PR01180 Arginine decarboxylase signature 513 538 1.6E-73 T 15-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 AM378_15320 a9ccec66e9a2dbb8853e2aaf4dcb6a51 658 PRINTS PR01180 Arginine decarboxylase signature 566 587 1.6E-73 T 15-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 AM378_15320 a9ccec66e9a2dbb8853e2aaf4dcb6a51 658 PRINTS PR01180 Arginine decarboxylase signature 92 107 1.6E-73 T 15-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 AM378_15320 a9ccec66e9a2dbb8853e2aaf4dcb6a51 658 TIGRFAM TIGR01273 speA: arginine decarboxylase 32 656 3.5E-270 T 15-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 AM378_15320 a9ccec66e9a2dbb8853e2aaf4dcb6a51 658 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 100 367 1.5E-68 T 15-10-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 AM378_15320 a9ccec66e9a2dbb8853e2aaf4dcb6a51 658 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 263 276 4.0E-19 T 15-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 AM378_15320 a9ccec66e9a2dbb8853e2aaf4dcb6a51 658 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 124 142 4.0E-19 T 15-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 AM378_15320 a9ccec66e9a2dbb8853e2aaf4dcb6a51 658 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 357 376 4.0E-19 T 15-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 AM378_15320 a9ccec66e9a2dbb8853e2aaf4dcb6a51 658 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 566 579 4.0E-19 T 15-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 AM378_15320 a9ccec66e9a2dbb8853e2aaf4dcb6a51 658 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 146 158 4.0E-19 T 15-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 AM378_15320 a9ccec66e9a2dbb8853e2aaf4dcb6a51 658 PIRSF PIRSF001336 17 658 3.7E-253 T 15-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 AM378_15320 a9ccec66e9a2dbb8853e2aaf4dcb6a51 658 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 301 314 - T 15-10-2018 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site AM378_15320 a9ccec66e9a2dbb8853e2aaf4dcb6a51 658 Gene3D G3DSA:1.20.58.930 386 481 3.7E-234 T 15-10-2018 AM378_15320 a9ccec66e9a2dbb8853e2aaf4dcb6a51 658 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 124 142 - T 15-10-2018 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site AM378_15320 a9ccec66e9a2dbb8853e2aaf4dcb6a51 658 Gene3D G3DSA:3.20.20.10 93 369 3.7E-234 T 15-10-2018 IPR029066 PLP-binding barrel AM378_15320 a9ccec66e9a2dbb8853e2aaf4dcb6a51 658 Hamap MF_01417 Biosynthetic arginine decarboxylase [speA]. 28 657 42.896 T 15-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 AM378_15320 a9ccec66e9a2dbb8853e2aaf4dcb6a51 658 Gene3D G3DSA:2.40.37.10 39 590 3.7E-234 T 15-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 AM378_15320 a9ccec66e9a2dbb8853e2aaf4dcb6a51 658 SUPERFAMILY SSF50621 482 586 3.31E-7 T 15-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 AM378_15320 a9ccec66e9a2dbb8853e2aaf4dcb6a51 658 SUPERFAMILY SSF51419 92 369 2.99E-67 T 15-10-2018 IPR029066 PLP-binding barrel AM378_21405 2255f1f87300d4ee06985e44db6ae8a2 341 SUPERFAMILY SSF51679 12 332 7.18E-88 T 15-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 AM378_21405 2255f1f87300d4ee06985e44db6ae8a2 341 Pfam PF00296 Luciferase-like monooxygenase 30 309 4.2E-33 T 15-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 AM378_21405 2255f1f87300d4ee06985e44db6ae8a2 341 Gene3D G3DSA:3.20.20.30 8 336 1.1E-99 T 15-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 AM378_21405 2255f1f87300d4ee06985e44db6ae8a2 341 TIGRFAM TIGR03558 oxido_grp_1: luciferase family oxidoreductase, group 1 13 332 2.2E-138 T 15-10-2018 IPR019949 Luciferase family oxidoreductase, group 1 AM378_16060 46ba54a8b1e29cb44a1cb083256bcb17 242 TIGRFAM TIGR00023 TIGR00023: acyl-phosphate glycerol 3-phosphate acyltransferase 32 224 2.7E-79 T 15-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 AM378_16060 46ba54a8b1e29cb44a1cb083256bcb17 242 Pfam PF02660 Glycerol-3-phosphate acyltransferase 41 214 6.0E-51 T 15-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 AM378_16060 46ba54a8b1e29cb44a1cb083256bcb17 242 Hamap MF_01043 Glycerol-3-phosphate acyltransferase [plsY]. 37 223 18.718 T 15-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 AM378_16060 46ba54a8b1e29cb44a1cb083256bcb17 242 SMART SM01207 40 215 1.5E-86 T 15-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 AM378_17810 54e087d7d18b531f8a8fa84b015dd974 270 Gene3D G3DSA:1.10.1020.10 57 156 5.5E-87 T 15-10-2018 IPR023095 Adenine-specific methyltransferase, domain 2 GO:0009007 AM378_17810 54e087d7d18b531f8a8fa84b015dd974 270 PIRSF PIRSF000398 1 270 8.4E-66 T 15-10-2018 IPR012263 Adenine modification methylase, M.EcoRV-type GO:0009007|GO:0032775 AM378_17810 54e087d7d18b531f8a8fa84b015dd974 270 Pfam PF02086 D12 class N6 adenine-specific DNA methyltransferase 10 252 7.0E-77 T 15-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 AM378_17810 54e087d7d18b531f8a8fa84b015dd974 270 TIGRFAM TIGR00571 dam: DNA adenine methylase 5 268 4.0E-97 T 15-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 AM378_17810 54e087d7d18b531f8a8fa84b015dd974 270 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 175 187 5.3E-19 T 15-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 AM378_17810 54e087d7d18b531f8a8fa84b015dd974 270 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 10 26 5.3E-19 T 15-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 AM378_17810 54e087d7d18b531f8a8fa84b015dd974 270 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 31 45 5.3E-19 T 15-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 AM378_17810 54e087d7d18b531f8a8fa84b015dd974 270 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 50 63 5.3E-19 T 15-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 AM378_17810 54e087d7d18b531f8a8fa84b015dd974 270 Gene3D G3DSA:3.40.50.150 7 239 5.5E-87 T 15-10-2018 AM378_17810 54e087d7d18b531f8a8fa84b015dd974 270 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 178 184 - T 15-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 AM378_17810 54e087d7d18b531f8a8fa84b015dd974 270 SUPERFAMILY SSF53335 5 268 4.15E-72 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM378_09235 97335f7654437a644e061d3e4bf84f9c 289 SUPERFAMILY SSF161098 82 267 3.92E-25 T 15-10-2018 IPR035906 MetI-like superfamily AM378_09235 97335f7654437a644e061d3e4bf84f9c 289 Gene3D G3DSA:1.10.3720.10 77 285 6.1E-21 T 15-10-2018 IPR035906 MetI-like superfamily AM378_09235 97335f7654437a644e061d3e4bf84f9c 289 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 105 286 6.8E-29 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AM378_10860 1ec3591e1c4952b27c505738e47e0900 277 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 77 88 8.5E-26 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_10860 1ec3591e1c4952b27c505738e47e0900 277 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 171 188 8.5E-26 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_10860 1ec3591e1c4952b27c505738e47e0900 277 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 124 140 8.5E-26 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_10860 1ec3591e1c4952b27c505738e47e0900 277 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 8.5E-26 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_10860 1ec3591e1c4952b27c505738e47e0900 277 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 150 169 8.5E-26 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_10860 1ec3591e1c4952b27c505738e47e0900 277 Gene3D G3DSA:3.40.50.720 2 277 8.2E-77 T 15-10-2018 AM378_10860 1ec3591e1c4952b27c505738e47e0900 277 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 130 138 2.5E-11 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_10860 1ec3591e1c4952b27c505738e47e0900 277 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 77 88 2.5E-11 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_10860 1ec3591e1c4952b27c505738e47e0900 277 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 150 169 2.5E-11 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_10860 1ec3591e1c4952b27c505738e47e0900 277 Pfam PF00106 short chain dehydrogenase 5 188 1.5E-47 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_10860 1ec3591e1c4952b27c505738e47e0900 277 SUPERFAMILY SSF51735 5 247 9.03E-63 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily AM378_10860 1ec3591e1c4952b27c505738e47e0900 277 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 137 165 - T 15-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AM378_23485 293bd194925e37cd7544741b9404ace1 414 PIRSF PIRSF000524 9 412 2.5E-103 T 15-10-2018 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832|Reactome: R-HSA-389661|Reactome: R-HSA-9033241 AM378_23485 293bd194925e37cd7544741b9404ace1 414 Gene3D G3DSA:3.90.1150.10 15 385 6.4E-136 T 15-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AM378_23485 293bd194925e37cd7544741b9404ace1 414 SUPERFAMILY SSF53383 8 392 3.52E-89 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM378_23485 293bd194925e37cd7544741b9404ace1 414 Pfam PF00266 Aminotransferase class-V 17 352 1.2E-22 T 15-10-2018 IPR000192 Aminotransferase class V domain AM378_23485 293bd194925e37cd7544741b9404ace1 414 Gene3D G3DSA:3.40.640.10 26 287 6.4E-136 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AM378_22125 9a145def5c1f423878ce49fe362ef3c2 373 Pfam PF12323 Helix-turn-helix domain 1 45 4.7E-20 T 15-10-2018 IPR021027 Transposase, putative, helix-turn-helix domain AM378_22125 9a145def5c1f423878ce49fe362ef3c2 373 Pfam PF01385 Probable transposase 164 273 3.6E-23 T 15-10-2018 IPR001959 Probable transposase, IS891/IS1136/IS1341 AM378_22125 9a145def5c1f423878ce49fe362ef3c2 373 Pfam PF07282 Putative transposase DNA-binding domain 287 355 5.3E-22 T 15-10-2018 IPR010095 Transposase IS605, OrfB, C-terminal AM378_22125 9a145def5c1f423878ce49fe362ef3c2 373 TIGRFAM TIGR01766 tspaseT_teng_C: transposase, IS605 OrfB family 242 314 4.6E-11 T 15-10-2018 IPR010095 Transposase IS605, OrfB, C-terminal AM378_19380 def9f43773be595ee6daf4d7ebbf403b 350 Gene3D G3DSA:3.40.50.1820 148 345 4.5E-12 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold AM378_19380 def9f43773be595ee6daf4d7ebbf403b 350 SUPERFAMILY SSF53474 153 288 2.95E-10 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold AM378_06255 6312b1fabe37d155c569973eba56607d 440 Pfam PF01979 Amidohydrolase family 72 433 2.2E-69 T 15-10-2018 IPR006680 Amidohydrolase-related GO:0016787 AM378_06255 6312b1fabe37d155c569973eba56607d 440 SUPERFAMILY SSF51338 32 435 8.64E-9 T 15-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 AM378_06255 6312b1fabe37d155c569973eba56607d 440 Gene3D G3DSA:3.20.20.140 75 392 1.3E-188 T 15-10-2018 AM378_06255 6312b1fabe37d155c569973eba56607d 440 TIGRFAM TIGR02967 guan_deamin: guanine deaminase 31 430 2.3E-177 T 15-10-2018 IPR014311 Guanine deaminase GO:0006147|GO:0008270|GO:0008892 KEGG: 00230+3.5.4.3|MetaCyc: PWY-5497|MetaCyc: PWY-6606|MetaCyc: PWY-6608|MetaCyc: PWY-7442|Reactome: R-HSA-74259 AM378_06255 6312b1fabe37d155c569973eba56607d 440 SUPERFAMILY SSF51556 74 377 7.26E-99 T 15-10-2018 IPR032466 Metal-dependent hydrolase AM378_06255 6312b1fabe37d155c569973eba56607d 440 Gene3D G3DSA:2.30.40.10 9 428 1.3E-188 T 15-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 AM378_19880 fbd65cdf0ef160ff50208afdb4479850 535 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 79 101 - T 15-10-2018 IPR023765 Solute-binding protein family 5, conserved site AM378_19880 fbd65cdf0ef160ff50208afdb4479850 535 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 73 453 1.6E-105 T 15-10-2018 IPR000914 Solute-binding protein family 5 domain AM378_19880 fbd65cdf0ef160ff50208afdb4479850 535 Gene3D G3DSA:3.40.190.10 211 523 1.7E-194 T 15-10-2018 AM378_19880 fbd65cdf0ef160ff50208afdb4479850 535 PIRSF PIRSF002741 22 534 3.3E-116 T 15-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 AM378_19880 fbd65cdf0ef160ff50208afdb4479850 535 Gene3D G3DSA:3.90.76.10 50 210 1.7E-194 T 15-10-2018 AM378_19880 fbd65cdf0ef160ff50208afdb4479850 535 Gene3D G3DSA:3.10.105.10 292 510 1.7E-194 T 15-10-2018 AM378_19880 fbd65cdf0ef160ff50208afdb4479850 535 SUPERFAMILY SSF53850 29 534 1.99E-158 T 15-10-2018 AM378_18645 90312f8bf6d2ae3a88906226ab662bde 108 SUPERFAMILY SSF143100 6 67 1.05E-8 T 15-10-2018 IPR035069 TTHA1013/TTHA0281-like AM378_18645 90312f8bf6d2ae3a88906226ab662bde 108 Pfam PF05534 HicB family 58 102 8.4E-13 T 15-10-2018 IPR008651 Uncharacterised protein family HicB AM378_18645 90312f8bf6d2ae3a88906226ab662bde 108 SUPERFAMILY SSF47598 72 107 8.15E-5 T 15-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 AM378_13145 3325773ce6758f45c245f0a7a1669ffe 326 Pfam PF07663 Sorbitol phosphotransferase enzyme II C-terminus 233 325 1.2E-41 T 15-10-2018 IPR011638 Sorbitol phosphotransferase enzyme II, C-terminal GO:0008982|GO:0009401|GO:0016021 KEGG: 00051+2.7.1.198 AM378_13145 3325773ce6758f45c245f0a7a1669ffe 326 TIGRFAM TIGR00825 EIIBC-GUT: PTS system, glucitol/sorbitol-specific, IIBC component 4 326 9.8E-180 T 15-10-2018 IPR004702 Phosphotransferease, sorbitol phosphotransferase enzyme II GO:0008982|GO:0009401|GO:0016021 KEGG: 00051+2.7.1.198 AM378_13145 3325773ce6758f45c245f0a7a1669ffe 326 Pfam PF03612 Sorbitol phosphotransferase enzyme II N-terminus 5 178 7.7E-70 T 15-10-2018 IPR011618 Sorbitol phosphotransferase enzyme II, N-terminal GO:0008982|GO:0009401|GO:0016021 KEGG: 00051+2.7.1.198 AM378_08675 5b1b6718b582d87c9ab951da9b05710d 334 Pfam PF05491 Holliday junction DNA helicase ruvB C-terminus 256 329 1.5E-34 T 15-10-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 AM378_08675 5b1b6718b582d87c9ab951da9b05710d 334 ProDom PD005323 DNA HELICASE HOLLIDAY JUNCTION RUVB NUCLEOTIDE-BINDING ATP-BINDING SOS RECOMBINATION RESPONSE 253 333 7.0E-38 T 15-10-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 AM378_08675 5b1b6718b582d87c9ab951da9b05710d 334 SUPERFAMILY SSF52540 23 255 3.65E-53 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_08675 5b1b6718b582d87c9ab951da9b05710d 334 TIGRFAM TIGR00635 ruvB: Holliday junction DNA helicase RuvB 27 329 5.9E-149 T 15-10-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 AM378_08675 5b1b6718b582d87c9ab951da9b05710d 334 Gene3D G3DSA:1.10.10.10 260 334 1.8E-33 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_08675 5b1b6718b582d87c9ab951da9b05710d 334 Gene3D G3DSA:3.40.50.300 23 184 6.8E-39 T 15-10-2018 AM378_08675 5b1b6718b582d87c9ab951da9b05710d 334 Gene3D G3DSA:1.10.8.60 185 258 3.0E-30 T 15-10-2018 AM378_08675 5b1b6718b582d87c9ab951da9b05710d 334 SUPERFAMILY SSF46785 260 331 2.31E-26 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM378_08675 5b1b6718b582d87c9ab951da9b05710d 334 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 7 238 2.0E-117 T 15-10-2018 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 AM378_08675 5b1b6718b582d87c9ab951da9b05710d 334 Hamap MF_00016 Holliday junction ATP-dependent DNA helicase RuvB [ruvB]. 1 334 186.339 T 15-10-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 AM378_08675 5b1b6718b582d87c9ab951da9b05710d 334 SMART SM00382 54 181 2.2E-11 T 15-10-2018 IPR003593 AAA+ ATPase domain AM378_11250 6ef2648b0e8af53bdbb60f4f34ba1593 62 Gene3D G3DSA:1.20.58.250 1 62 4.7E-16 T 15-10-2018 IPR036745 DNA polymerase III-theta superfamily GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM378_11250 6ef2648b0e8af53bdbb60f4f34ba1593 62 Pfam PF06440 DNA polymerase III, theta subunit 5 61 2.4E-13 T 15-10-2018 IPR009052 DNA polymerase III-theta, bacterial GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM378_11250 6ef2648b0e8af53bdbb60f4f34ba1593 62 ProDom PD057609 DNA POLYMERASE THETA SUBUNIT TRANSFERASE III NUCLEOTIDYLTRANSFERASE III DNA-DIRECTED REPLICATION 5 60 1.0E-5 T 15-10-2018 IPR009052 DNA polymerase III-theta, bacterial GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM378_11250 6ef2648b0e8af53bdbb60f4f34ba1593 62 SUPERFAMILY SSF46575 3 60 1.96E-18 T 15-10-2018 AM378_03865 9c90edba78d4bcfea8c35ea5ad33fd29 266 SMART SM00477 46 246 8.5E-78 T 15-10-2018 IPR020821 Extracellular Endonuclease, subunit A GO:0003676|GO:0016787|GO:0046872 AM378_03865 9c90edba78d4bcfea8c35ea5ad33fd29 266 SMART SM00892 45 246 1.5E-43 T 15-10-2018 IPR001604 DNA/RNA non-specific endonuclease GO:0003676|GO:0016787|GO:0046872 AM378_03865 9c90edba78d4bcfea8c35ea5ad33fd29 266 ProSitePatterns PS01070 DNA/RNA non-specific endonucleases active site. 107 115 - T 15-10-2018 IPR018524 DNA/RNA non-specific endonuclease, active site GO:0003676|GO:0016787|GO:0046872 AM378_03865 9c90edba78d4bcfea8c35ea5ad33fd29 266 SUPERFAMILY SSF54060 28 265 4.83E-59 T 15-10-2018 AM378_03865 9c90edba78d4bcfea8c35ea5ad33fd29 266 Pfam PF01223 DNA/RNA non-specific endonuclease 28 245 8.3E-46 T 15-10-2018 IPR001604 DNA/RNA non-specific endonuclease GO:0003676|GO:0016787|GO:0046872 AM378_03865 9c90edba78d4bcfea8c35ea5ad33fd29 266 Gene3D G3DSA:3.40.570.10 22 266 4.1E-95 T 15-10-2018 AM378_06840 2502d607821a4003da8503f6e16a05b0 92 TIGRFAM TIGR03859 PQQ_PqqD: coenzyme PQQ biosynthesis protein PqqD 9 88 8.0E-35 T 15-10-2018 IPR022479 Coenzyme PQQ synthesis D, bacteria GO:0018189|GO:0048038 AM378_06840 2502d607821a4003da8503f6e16a05b0 92 Gene3D G3DSA:1.10.10.1150 1 90 2.4E-26 T 15-10-2018 AM378_06840 2502d607821a4003da8503f6e16a05b0 92 Hamap MF_00655 Coenzyme PQQ synthesis protein D [pqqD]. 3 90 24.917 T 15-10-2018 IPR022479 Coenzyme PQQ synthesis D, bacteria GO:0018189|GO:0048038 AM378_06840 2502d607821a4003da8503f6e16a05b0 92 Pfam PF05402 Coenzyme PQQ synthesis protein D (PqqD) 26 88 2.9E-13 T 15-10-2018 IPR008792 Coenzyme PQQ synthesis D AM378_09970 cfd7482d23e784c8e3e57da91478a7a5 120 Gene3D G3DSA:1.20.120.1620 18 120 3.7E-41 T 15-10-2018 IPR038314 T6SS superfamily AM378_09970 cfd7482d23e784c8e3e57da91478a7a5 120 Pfam PF16695 Type VI secretion system (T6SS), amidase immunity protein 29 110 2.4E-20 T 15-10-2018 IPR032032 Type VI secretion system (T6SS), amidase immunity protein AM378_19310 aa81f73169408095bafa867f84fde90b 139 TIGRFAM TIGR01216 ATP_synt_epsi: ATP synthase F1, epsilon subunit 4 133 3.7E-47 T 15-10-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM378_19310 aa81f73169408095bafa867f84fde90b 139 SUPERFAMILY SSF46604 89 137 1.46E-15 T 15-10-2018 IPR036794 ATP synthase delta/epsilon subunit, C-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM378_19310 aa81f73169408095bafa867f84fde90b 139 Gene3D G3DSA:1.20.5.440 91 134 5.6E-20 T 15-10-2018 AM378_19310 aa81f73169408095bafa867f84fde90b 139 Hamap MF_00530 ATP synthase epsilon chain [atpC]. 3 131 21.762 T 15-10-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM378_19310 aa81f73169408095bafa867f84fde90b 139 Gene3D G3DSA:2.60.15.10 3 90 9.0E-33 T 15-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM378_19310 aa81f73169408095bafa867f84fde90b 139 SUPERFAMILY SSF51344 3 86 3.01E-25 T 15-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM378_19310 aa81f73169408095bafa867f84fde90b 139 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 6 84 1.9E-30 T 15-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM378_19310 aa81f73169408095bafa867f84fde90b 139 Pfam PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain 89 133 2.6E-13 T 15-10-2018 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain AM378_19310 aa81f73169408095bafa867f84fde90b 139 ProDom PD000944 ATP SYNTHASE ION EPSILON SUBUNIT HYDROLASE CF1 SYNTHESIS CHAIN HYDROGEN 10 90 2.0E-37 T 15-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM378_24225 ebfa477472fd1454e40f7739f95f132f 186 Pfam PF11622 Protein of unknown function (DUF3251) 20 182 5.5E-59 T 15-10-2018 IPR021658 Domain of unknown function DUF3251 AM378_24225 ebfa477472fd1454e40f7739f95f132f 186 Gene3D G3DSA:2.60.40.1620 43 176 4.9E-47 T 15-10-2018 IPR037125 Lipoprotein YajI-like superfamily AM378_15760 1a81cce800d8a940e53d81b55da90759 204 Pfam PF13443 Cro/C1-type HTH DNA-binding domain 15 74 4.2E-7 T 15-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM378_15760 1a81cce800d8a940e53d81b55da90759 204 SUPERFAMILY SSF47413 9 72 6.48E-9 T 15-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AM378_15760 1a81cce800d8a940e53d81b55da90759 204 SMART SM00530 15 71 6.3E-4 T 15-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM378_15760 1a81cce800d8a940e53d81b55da90759 204 Gene3D G3DSA:1.10.260.40 7 80 1.2E-10 T 15-10-2018 AM378_11235 d0a68368a153b16ba2863c65ca32257f 248 Pfam PF00717 Peptidase S24-like 159 225 3.1E-10 T 15-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C AM378_11235 d0a68368a153b16ba2863c65ca32257f 248 Gene3D G3DSA:2.10.109.10 137 246 5.7E-6 T 15-10-2018 AM378_11235 d0a68368a153b16ba2863c65ca32257f 248 SUPERFAMILY SSF51306 112 244 2.62E-19 T 15-10-2018 IPR036286 LexA/Signal peptidase-like superfamily AM378_01030 84d880c83f306e99e71698601406f706 935 Pfam PF00676 Dehydrogenase E1 component 221 512 7.2E-50 T 15-10-2018 IPR001017 Dehydrogenase, E1 component GO:0016624 Reactome: R-HSA-389661 AM378_01030 84d880c83f306e99e71698601406f706 935 Gene3D G3DSA:3.40.50.11610 723 929 6.8E-174 T 15-10-2018 AM378_01030 84d880c83f306e99e71698601406f706 935 Pfam PF16078 2-oxoglutarate dehydrogenase N-terminus 12 49 9.5E-16 T 15-10-2018 IPR032106 2-oxoglutarate dehydrogenase E1 component, N-terminal domain KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 AM378_01030 84d880c83f306e99e71698601406f706 935 Gene3D G3DSA:3.40.50.970 167 533 1.6E-147 T 15-10-2018 AM378_01030 84d880c83f306e99e71698601406f706 935 PIRSF PIRSF000157 1 934 0.0 T 15-10-2018 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 AM378_01030 84d880c83f306e99e71698601406f706 935 Gene3D G3DSA:1.10.287.1150 84 166 1.7E-30 T 15-10-2018 AM378_01030 84d880c83f306e99e71698601406f706 935 TIGRFAM TIGR00239 2oxo_dh_E1: oxoglutarate dehydrogenase (succinyl-transferring), E1 component 14 932 0.0 T 15-10-2018 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 AM378_01030 84d880c83f306e99e71698601406f706 935 Pfam PF16870 2-oxoglutarate dehydrogenase C-terminal 791 932 7.5E-54 T 15-10-2018 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 AM378_01030 84d880c83f306e99e71698601406f706 935 SUPERFAMILY SSF52518 576 793 1.47E-51 T 15-10-2018 IPR029061 Thiamin diphosphate-binding fold AM378_01030 84d880c83f306e99e71698601406f706 935 Pfam PF02779 Transketolase, pyrimidine binding domain 592 787 8.2E-67 T 15-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain AM378_01030 84d880c83f306e99e71698601406f706 935 Gene3D G3DSA:3.40.50.12470 556 802 6.8E-174 T 15-10-2018 AM378_01030 84d880c83f306e99e71698601406f706 935 SMART SM00861 593 786 4.4E-63 T 15-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain AM378_01030 84d880c83f306e99e71698601406f706 935 SUPERFAMILY SSF52518 120 545 2.16E-88 T 15-10-2018 IPR029061 Thiamin diphosphate-binding fold AM378_05540 7f1b81a7d8a7972f50f9fa110dd2ef0a 138 Pfam PF10697 Protein of unknown function (DUF2502) 23 112 4.9E-29 T 15-10-2018 IPR019638 Protein of unknown function DUF2502 AM378_19760 eb63349709fee00ddbcc0c5f9f494acf 300 Gene3D G3DSA:1.10.10.10 1 85 3.3E-23 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_19760 eb63349709fee00ddbcc0c5f9f494acf 300 Gene3D G3DSA:3.40.190.10 169 267 1.7E-52 T 15-10-2018 AM378_19760 eb63349709fee00ddbcc0c5f9f494acf 300 Gene3D G3DSA:3.40.190.10 91 291 1.7E-52 T 15-10-2018 AM378_19760 eb63349709fee00ddbcc0c5f9f494acf 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 65 1.9E-12 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_19760 eb63349709fee00ddbcc0c5f9f494acf 300 SUPERFAMILY SSF46785 4 82 7.07E-14 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM378_19760 eb63349709fee00ddbcc0c5f9f494acf 300 Pfam PF03466 LysR substrate binding domain 95 294 3.5E-19 T 15-10-2018 IPR005119 LysR, substrate-binding AM378_19760 eb63349709fee00ddbcc0c5f9f494acf 300 SUPERFAMILY SSF53850 89 295 4.34E-36 T 15-10-2018 AM378_06390 7833e81a79f89e3ce29c074fb4103412 699 SUPERFAMILY SSF52540 491 698 1.92E-63 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_06390 7833e81a79f89e3ce29c074fb4103412 699 Gene3D G3DSA:3.40.50.300 489 699 1.1E-66 T 15-10-2018 AM378_06390 7833e81a79f89e3ce29c074fb4103412 699 Pfam PF03412 Peptidase C39 family 21 148 2.6E-39 T 15-10-2018 IPR005074 Peptidase C39, bacteriocin processing GO:0005524|GO:0006508|GO:0008233|GO:0016021 AM378_06390 7833e81a79f89e3ce29c074fb4103412 699 ProSitePatterns PS00211 ABC transporters family signature. 630 644 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM378_06390 7833e81a79f89e3ce29c074fb4103412 699 Pfam PF00005 ABC transporter 510 658 9.5E-32 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM378_06390 7833e81a79f89e3ce29c074fb4103412 699 SMART SM00382 518 699 3.1E-14 T 15-10-2018 IPR003593 AAA+ ATPase domain AM378_06390 7833e81a79f89e3ce29c074fb4103412 699 Gene3D G3DSA:1.20.1560.10 162 476 2.8E-58 T 15-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 AM378_06390 7833e81a79f89e3ce29c074fb4103412 699 SUPERFAMILY SSF90123 172 456 4.58E-56 T 15-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 AM378_06390 7833e81a79f89e3ce29c074fb4103412 699 Pfam PF00664 ABC transporter transmembrane region 179 443 3.5E-45 T 15-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 AM378_06390 7833e81a79f89e3ce29c074fb4103412 699 Gene3D G3DSA:3.90.70.10 11 157 1.2E-41 T 15-10-2018 AM378_20845 e39112b331be48142b378b9350d98410 542 Pfam PF00501 AMP-binding enzyme 35 438 7.4E-78 T 15-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 AM378_20845 e39112b331be48142b378b9350d98410 542 Pfam PF13193 AMP-binding enzyme C-terminal domain 447 521 9.1E-12 T 15-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain AM378_20845 e39112b331be48142b378b9350d98410 542 Gene3D G3DSA:3.40.50.12780 2 432 5.8E-144 T 15-10-2018 AM378_20845 e39112b331be48142b378b9350d98410 542 TIGRFAM TIGR02275 DHB_AMP_lig: (2,3-dihydroxybenzoyl)adenylate synthase 3 528 1.6E-260 T 15-10-2018 IPR011963 2,3-dihydroxybenzoate-AMP ligase GO:0008668|GO:0019290 AM378_20845 e39112b331be48142b378b9350d98410 542 ProSitePatterns PS00455 Putative AMP-binding domain signature. 188 199 - T 15-10-2018 IPR020845 AMP-binding, conserved site AM378_20845 e39112b331be48142b378b9350d98410 542 Gene3D G3DSA:3.30.300.310 434 537 1.6E-26 T 15-10-2018 AM378_20845 e39112b331be48142b378b9350d98410 542 SUPERFAMILY SSF56801 14 534 8.63E-127 T 15-10-2018 AM378_08285 8ae58bdff0010677b063a29c5a3f1e9d 214 Pfam PF01914 MarC family integral membrane protein 10 210 2.5E-73 T 15-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 AM378_08285 8ae58bdff0010677b063a29c5a3f1e9d 214 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 8 206 1.2E-78 T 15-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 AM378_01785 afdf84800a5a2bccfc49497d85188d44 432 Pfam PF00939 Sodium:sulfate symporter transmembrane region 11 431 4.8E-26 T 15-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 AM378_24060 0982c90315dcdc033af2758384732a61 899 TIGRFAM TIGR01786 TonB-hemlactrns: TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein 146 899 7.5E-132 T 15-10-2018 IPR010949 TonB-dependent haemoglobin/transferrin/lactoferrin receptor GO:0019867|GO:0022857|GO:0055085 AM378_24060 0982c90315dcdc033af2758384732a61 899 SUPERFAMILY SSF56935 150 899 1.26E-87 T 15-10-2018 AM378_24060 0982c90315dcdc033af2758384732a61 899 Gene3D G3DSA:3.55.50.30 41 146 2.4E-33 T 15-10-2018 AM378_24060 0982c90315dcdc033af2758384732a61 899 Pfam PF07715 TonB-dependent Receptor Plug Domain 152 259 1.1E-11 T 15-10-2018 IPR012910 TonB-dependent receptor, plug domain AM378_24060 0982c90315dcdc033af2758384732a61 899 Gene3D G3DSA:2.40.170.20 275 899 8.3E-204 T 15-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AM378_24060 0982c90315dcdc033af2758384732a61 899 Pfam PF07660 Secretin and TonB N terminus short domain 70 120 6.8E-8 T 15-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 AM378_24060 0982c90315dcdc033af2758384732a61 899 Pfam PF00593 TonB dependent receptor 354 898 1.8E-43 T 15-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel AM378_24060 0982c90315dcdc033af2758384732a61 899 SMART SM00965 70 121 3.9E-7 T 15-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 AM378_24060 0982c90315dcdc033af2758384732a61 899 TIGRFAM TIGR01785 TonB-hemin: TonB-dependent heme/hemoglobin receptor family protein 134 899 7.8E-175 T 15-10-2018 IPR011276 TonB-dependent haem/haemoglobin receptor GO:0015232|GO:0015886|GO:0019867 AM378_24060 0982c90315dcdc033af2758384732a61 899 Gene3D G3DSA:2.170.130.10 147 274 8.7E-46 T 15-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily AM378_13885 33b0908bde117931c9ed90221050741b 76 Pfam PF06902 Divergent 4Fe-4S mono-cluster 13 76 1.2E-26 T 15-10-2018 IPR010693 Divergent 4Fe-4S mono-cluster AM378_08365 eb7f5e2a067db5893049a146222c5954 190 SUPERFAMILY SSF102405 2 180 3.21E-62 T 15-10-2018 AM378_08365 eb7f5e2a067db5893049a146222c5954 190 Pfam PF03641 Possible lysine decarboxylase 47 176 7.9E-41 T 15-10-2018 IPR031100 LOG family AM378_08365 eb7f5e2a067db5893049a146222c5954 190 Gene3D G3DSA:3.40.50.450 1 190 1.8E-76 T 15-10-2018 AM378_08365 eb7f5e2a067db5893049a146222c5954 190 TIGRFAM TIGR00730 TIGR00730: TIGR00730 family protein 4 180 1.0E-61 T 15-10-2018 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG AM378_12665 a40cdb3896f35b8f0a68b9fe8fc66b0f 293 Gene3D G3DSA:3.40.630.40 50 291 3.4E-76 T 15-10-2018 AM378_12665 a40cdb3896f35b8f0a68b9fe8fc66b0f 293 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 64 279 6.9E-49 T 15-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 AM378_12665 a40cdb3896f35b8f0a68b9fe8fc66b0f 293 SUPERFAMILY SSF53187 62 282 3.77E-52 T 15-10-2018 AM378_12665 a40cdb3896f35b8f0a68b9fe8fc66b0f 293 SMART SM00646 124 279 3.7E-64 T 15-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 AM378_16655 6c1318b4a6f9f42a10681501929565ed 477 ProSitePatterns PS00717 Sigma-54 factors family signature 1. 364 383 - T 15-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 AM378_16655 6c1318b4a6f9f42a10681501929565ed 477 Pfam PF04552 Sigma-54, DNA binding domain 317 475 1.1E-69 T 15-10-2018 IPR007634 RNA polymerase sigma factor 54, DNA-binding AM378_16655 6c1318b4a6f9f42a10681501929565ed 477 Pfam PF04963 Sigma-54 factor, core binding domain 114 303 8.3E-62 T 15-10-2018 IPR007046 RNA polymerase sigma factor 54, core-binding domain GO:0003677|GO:0006352 AM378_16655 6c1318b4a6f9f42a10681501929565ed 477 Gene3D G3DSA:1.10.10.60 417 474 5.7E-23 T 15-10-2018 AM378_16655 6c1318b4a6f9f42a10681501929565ed 477 ProSitePatterns PS00718 Sigma-54 factors family signature 2. 455 462 - T 15-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 AM378_16655 6c1318b4a6f9f42a10681501929565ed 477 PIRSF PIRSF000774 1 477 9.1E-152 T 15-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 AM378_16655 6c1318b4a6f9f42a10681501929565ed 477 TIGRFAM TIGR02395 rpoN_sigma: RNA polymerase sigma-54 factor 9 474 2.0E-159 T 15-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 AM378_16655 6c1318b4a6f9f42a10681501929565ed 477 PRINTS PR00045 Sigma-54 factor signature 186 203 3.0E-31 T 15-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 AM378_16655 6c1318b4a6f9f42a10681501929565ed 477 PRINTS PR00045 Sigma-54 factor signature 376 388 3.0E-31 T 15-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 AM378_16655 6c1318b4a6f9f42a10681501929565ed 477 PRINTS PR00045 Sigma-54 factor signature 392 403 3.0E-31 T 15-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 AM378_16655 6c1318b4a6f9f42a10681501929565ed 477 PRINTS PR00045 Sigma-54 factor signature 450 468 3.0E-31 T 15-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 AM378_16655 6c1318b4a6f9f42a10681501929565ed 477 Pfam PF00309 Sigma-54 factor, Activator interacting domain (AID) 5 48 3.0E-15 T 15-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 AM378_16655 6c1318b4a6f9f42a10681501929565ed 477 Gene3D G3DSA:1.10.10.1330 116 250 4.7E-25 T 15-10-2018 IPR038709 RNA polymerase sigma-54 factor, core-binding domain superfamily AM378_10345 d7b6c90fe10059ea8e5a178420985d07 257 Gene3D G3DSA:1.10.12.10 200 257 1.3E-23 T 15-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal AM378_10345 d7b6c90fe10059ea8e5a178420985d07 257 SUPERFAMILY SSF52096 1 257 7.17E-84 T 15-10-2018 IPR029045 ClpP/crotonase-like domain superfamily AM378_10345 d7b6c90fe10059ea8e5a178420985d07 257 Gene3D G3DSA:3.90.226.10 3 199 2.0E-72 T 15-10-2018 AM378_10345 d7b6c90fe10059ea8e5a178420985d07 257 Pfam PF00378 Enoyl-CoA hydratase/isomerase 11 256 6.4E-71 T 15-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 AM378_10345 d7b6c90fe10059ea8e5a178420985d07 257 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 98 118 - T 15-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 AM378_14905 202d15dd28928f5637a319529c105d9a 224 Pfam PF03006 Haemolysin-III related 20 217 3.6E-40 T 15-10-2018 IPR004254 AdipoR/Haemolysin-III-related GO:0016021 AM378_14905 202d15dd28928f5637a319529c105d9a 224 TIGRFAM TIGR01065 hlyIII: channel protein, hemolysin III family 23 224 2.1E-73 T 15-10-2018 IPR005744 Hly-III GO:0016021|GO:0019835 AM378_00330 7c6f337294285590d64146b3667c3988 387 Gene3D G3DSA:1.20.1720.10 6 372 3.3E-73 T 15-10-2018 AM378_00330 7c6f337294285590d64146b3667c3988 387 Pfam PF07690 Major Facilitator Superfamily 21 340 1.0E-33 T 15-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM378_00330 7c6f337294285590d64146b3667c3988 387 SUPERFAMILY SSF103473 3 385 2.75E-51 T 15-10-2018 IPR036259 MFS transporter superfamily AM378_04360 2ffda381e5f1fe7a9ab1c15998dfb8bc 265 Gene3D G3DSA:3.30.470.10 1 107 2.9E-29 T 15-10-2018 AM378_04360 2ffda381e5f1fe7a9ab1c15998dfb8bc 265 SUPERFAMILY SSF56752 1 254 4.45E-65 T 15-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 AM378_04360 2ffda381e5f1fe7a9ab1c15998dfb8bc 265 Gene3D G3DSA:3.20.10.10 121 265 3.3E-48 T 15-10-2018 AM378_04360 2ffda381e5f1fe7a9ab1c15998dfb8bc 265 Pfam PF01063 Amino-transferase class IV 24 245 6.9E-41 T 15-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 AM378_04360 2ffda381e5f1fe7a9ab1c15998dfb8bc 265 TIGRFAM TIGR03461 pabC_Proteo: aminodeoxychorismate lyase 3 263 1.9E-110 T 15-10-2018 IPR017824 Aminodeoxychorismate lyase, class IV GO:0008696|GO:0030170|GO:0046656 KEGG: 00790+4.1.3.38|MetaCyc: PWY-6543 AM378_04360 2ffda381e5f1fe7a9ab1c15998dfb8bc 265 ProSitePatterns PS00770 Aminotransferases class-IV signature. 173 202 - T 15-10-2018 IPR018300 Aminotransferase, class IV, conserved site GO:0003824 Reactome: R-HSA-70895 AM378_21545 004484b75b77927fe4cc2ae1ac6025b6 257 SUPERFAMILY SSF46689 214 255 6.72E-7 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AM378_21545 004484b75b77927fe4cc2ae1ac6025b6 257 Gene3D G3DSA:2.60.120.10 3 107 3.8E-6 T 15-10-2018 IPR014710 RmlC-like jelly roll fold AM378_21545 004484b75b77927fe4cc2ae1ac6025b6 257 SMART SM00342 174 256 1.0E-17 T 15-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM378_21545 004484b75b77927fe4cc2ae1ac6025b6 257 SUPERFAMILY SSF51182 22 182 5.34E-13 T 15-10-2018 IPR011051 RmlC-like cupin domain superfamily AM378_21545 004484b75b77927fe4cc2ae1ac6025b6 257 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 211 252 - T 15-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AM378_21545 004484b75b77927fe4cc2ae1ac6025b6 257 Gene3D G3DSA:1.10.10.60 156 216 9.1E-8 T 15-10-2018 AM378_21545 004484b75b77927fe4cc2ae1ac6025b6 257 Pfam PF12833 Helix-turn-helix domain 181 256 1.4E-17 T 15-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM378_21545 004484b75b77927fe4cc2ae1ac6025b6 257 Gene3D G3DSA:1.10.10.60 217 256 2.8E-7 T 15-10-2018 AM378_21545 004484b75b77927fe4cc2ae1ac6025b6 257 Pfam PF02311 AraC-like ligand binding domain 29 142 3.7E-9 T 15-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 AM378_06945 9c6d0e3448a780c9ecebdfcf9d41b692 306 SUPERFAMILY SSF53850 92 302 3.8E-36 T 15-10-2018 AM378_06945 9c6d0e3448a780c9ecebdfcf9d41b692 306 Pfam PF03466 LysR substrate binding domain 91 298 4.8E-36 T 15-10-2018 IPR005119 LysR, substrate-binding AM378_06945 9c6d0e3448a780c9ecebdfcf9d41b692 306 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 65 3.2E-20 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_06945 9c6d0e3448a780c9ecebdfcf9d41b692 306 Gene3D G3DSA:3.40.190.290 94 299 1.6E-48 T 15-10-2018 AM378_06945 9c6d0e3448a780c9ecebdfcf9d41b692 306 Gene3D G3DSA:1.10.10.10 6 93 2.6E-25 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_06945 9c6d0e3448a780c9ecebdfcf9d41b692 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 5.2E-5 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_06945 9c6d0e3448a780c9ecebdfcf9d41b692 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 5.2E-5 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_06945 9c6d0e3448a780c9ecebdfcf9d41b692 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 5.2E-5 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_06945 9c6d0e3448a780c9ecebdfcf9d41b692 306 SUPERFAMILY SSF46785 8 88 2.4E-21 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM378_11165 8c550e0152da101237c9a6e904e796c8 334 Pfam PF00356 Bacterial regulatory proteins, lacI family 9 54 4.6E-16 T 15-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM378_11165 8c550e0152da101237c9a6e904e796c8 334 Gene3D G3DSA:3.40.50.2300 67 316 3.0E-42 T 15-10-2018 AM378_11165 8c550e0152da101237c9a6e904e796c8 334 SUPERFAMILY SSF47413 7 65 1.88E-16 T 15-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AM378_11165 8c550e0152da101237c9a6e904e796c8 334 Gene3D G3DSA:3.40.50.2300 168 296 3.0E-42 T 15-10-2018 AM378_11165 8c550e0152da101237c9a6e904e796c8 334 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 67 266 8.5E-20 T 15-10-2018 IPR001761 Periplasmic binding protein/LacI sugar binding domain AM378_11165 8c550e0152da101237c9a6e904e796c8 334 SMART SM00354 7 77 9.4E-26 T 15-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM378_11165 8c550e0152da101237c9a6e904e796c8 334 SUPERFAMILY SSF53822 65 319 1.08E-42 T 15-10-2018 IPR028082 Periplasmic binding protein-like I AM378_11165 8c550e0152da101237c9a6e904e796c8 334 Gene3D G3DSA:1.10.260.40 1 65 1.8E-22 T 15-10-2018 AM378_06885 c7f2b098b2f001bf9c81c363db3afa99 406 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 1 336 5.5E-48 T 15-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 AM378_06885 c7f2b098b2f001bf9c81c363db3afa99 406 Gene3D G3DSA:3.20.20.70 1 358 1.7E-105 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM378_06885 c7f2b098b2f001bf9c81c363db3afa99 406 SUPERFAMILY SSF51395 1 346 7.82E-93 T 15-10-2018 AM378_01800 ce4d40aea7841a0b273d663adec9bbd9 85 Pfam PF07338 Protein of unknown function (DUF1471) 34 84 9.5E-19 T 15-10-2018 IPR010854 Domain of unknown function DUF1471 AM378_01800 ce4d40aea7841a0b273d663adec9bbd9 85 Gene3D G3DSA:3.30.1660.10 21 85 4.3E-20 T 15-10-2018 IPR025543 Dodecin-like AM378_01800 ce4d40aea7841a0b273d663adec9bbd9 85 SUPERFAMILY SSF159871 3 85 5.62E-24 T 15-10-2018 IPR036275 YdgH-like superfamily AM378_06805 79581df2643a946903975ae4d7ede5eb 275 SUPERFAMILY SSF53474 11 260 1.86E-63 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold AM378_06805 79581df2643a946903975ae4d7ede5eb 275 Pfam PF12697 Alpha/beta hydrolase family 26 254 4.1E-24 T 15-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AM378_06805 79581df2643a946903975ae4d7ede5eb 275 Gene3D G3DSA:3.40.50.1820 9 261 8.8E-61 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold AM378_06805 79581df2643a946903975ae4d7ede5eb 275 PRINTS PR00111 Alpha/beta hydrolase fold signature 49 64 7.4E-12 T 15-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AM378_06805 79581df2643a946903975ae4d7ede5eb 275 PRINTS PR00111 Alpha/beta hydrolase fold signature 107 120 7.4E-12 T 15-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AM378_06805 79581df2643a946903975ae4d7ede5eb 275 PRINTS PR00111 Alpha/beta hydrolase fold signature 93 106 7.4E-12 T 15-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AM378_19290 a16bebd509653bc4610841ff158603e5 177 ProSitePatterns PS00389 ATP synthase delta (OSCP) subunit signature. 137 156 - T 15-10-2018 IPR020781 ATPase, OSCP/delta subunit, conserved site GO:0015986|GO:0016020|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM378_19290 a16bebd509653bc4610841ff158603e5 177 TIGRFAM TIGR01145 ATP_synt_delta: ATP synthase F1, delta subunit 7 175 3.0E-64 T 15-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM378_19290 a16bebd509653bc4610841ff158603e5 177 Gene3D G3DSA:1.10.520.20 2 106 3.5E-38 T 15-10-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM378_19290 a16bebd509653bc4610841ff158603e5 177 PRINTS PR00125 ATP synthase delta subunit signature 7 26 9.2E-29 T 15-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM378_19290 a16bebd509653bc4610841ff158603e5 177 PRINTS PR00125 ATP synthase delta subunit signature 135 150 9.2E-29 T 15-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM378_19290 a16bebd509653bc4610841ff158603e5 177 PRINTS PR00125 ATP synthase delta subunit signature 150 168 9.2E-29 T 15-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM378_19290 a16bebd509653bc4610841ff158603e5 177 PRINTS PR00125 ATP synthase delta subunit signature 85 99 9.2E-29 T 15-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM378_19290 a16bebd509653bc4610841ff158603e5 177 PRINTS PR00125 ATP synthase delta subunit signature 74 85 9.2E-29 T 15-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM378_19290 a16bebd509653bc4610841ff158603e5 177 SUPERFAMILY SSF47928 3 104 9.02E-28 T 15-10-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM378_19290 a16bebd509653bc4610841ff158603e5 177 Pfam PF00213 ATP synthase delta (OSCP) subunit 7 174 8.1E-51 T 15-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM378_19290 a16bebd509653bc4610841ff158603e5 177 Hamap MF_01416 ATP synthase subunit delta [atpD]. 3 177 18.853 T 15-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM378_24050 67a2e69d732d028e62dc7aa17309ab13 166 Gene3D G3DSA:1.10.1740.10 1 78 1.2E-8 T 15-10-2018 AM378_24050 67a2e69d732d028e62dc7aa17309ab13 166 SUPERFAMILY SSF88659 91 165 9.16E-16 T 15-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like AM378_24050 67a2e69d732d028e62dc7aa17309ab13 166 SUPERFAMILY SSF88946 6 91 7.06E-15 T 15-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 AM378_24050 67a2e69d732d028e62dc7aa17309ab13 166 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 5 160 1.0E-26 T 15-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 AM378_24050 67a2e69d732d028e62dc7aa17309ab13 166 Pfam PF08281 Sigma-70, region 4 107 159 2.8E-15 T 15-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM378_24050 67a2e69d732d028e62dc7aa17309ab13 166 Gene3D G3DSA:1.10.10.10 90 166 3.7E-15 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_24050 67a2e69d732d028e62dc7aa17309ab13 166 Pfam PF04542 Sigma-70 region 2 9 76 6.8E-11 T 15-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 AM378_18360 c98f1954da6cec74912ef393e0be1cdf 545 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 282 489 3.2E-40 T 15-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 AM378_18360 c98f1954da6cec74912ef393e0be1cdf 545 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 4 262 8.8E-32 T 15-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 AM378_18360 c98f1954da6cec74912ef393e0be1cdf 545 SUPERFAMILY SSF53067 280 532 4.03E-53 T 15-10-2018 AM378_18360 c98f1954da6cec74912ef393e0be1cdf 545 PIRSF PIRSF000538 2 543 1.1E-74 T 15-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 AM378_18360 c98f1954da6cec74912ef393e0be1cdf 545 SUPERFAMILY SSF53067 4 263 4.17E-61 T 15-10-2018 AM378_18360 c98f1954da6cec74912ef393e0be1cdf 545 Gene3D G3DSA:3.30.420.40 5 513 7.9E-217 T 15-10-2018 AM378_18360 c98f1954da6cec74912ef393e0be1cdf 545 TIGRFAM TIGR01315 5C_CHO_kinase: FGGY-family pentulose kinase 5 538 3.7E-210 T 15-10-2018 IPR006003 FGGY carbohydrate kinase, pentulose kinase GO:0005975|GO:0016773 AM378_18360 c98f1954da6cec74912ef393e0be1cdf 545 Gene3D G3DSA:3.30.420.460 323 525 7.9E-217 T 15-10-2018 AM378_09310 0948d0e5b91915ad88392f9f306402e5 172 Pfam PF04985 Phage tail tube protein FII 4 171 8.6E-64 T 15-10-2018 IPR006498 Tail tube protein AM378_09310 0948d0e5b91915ad88392f9f306402e5 172 TIGRFAM TIGR01611 tail_tube: phage major tail tube protein 3 172 6.5E-53 T 15-10-2018 IPR006498 Tail tube protein AM378_24110 d5a42e27caf005c8a75a4eb60b08024a 303 Hamap MF_00194 Recombination-associated protein RdgC [rdgC]. 2 302 41.527 T 15-10-2018 IPR007476 Putative exonuclease, RdgC GO:0006310 AM378_24110 d5a42e27caf005c8a75a4eb60b08024a 303 Pfam PF04381 Putative exonuclease, RdgC 2 300 1.8E-128 T 15-10-2018 IPR007476 Putative exonuclease, RdgC GO:0006310 AM378_09445 387b28998b29fa7060a76e5875e74cb0 93 ProDom PD029230 GPA 5'REGION GP83 ORF83 GENE GP45 BACTERIOPHAGE SIMILAR ORF4 2 77 1.0E-23 T 15-10-2018 IPR020284 Protein of unknown function CP83 AM378_09445 387b28998b29fa7060a76e5875e74cb0 93 Pfam PF17399 Domain of unknown function (DUF5405) 8 88 7.0E-19 T 15-10-2018 IPR035404 Domain of unknown function DUF5405 AM378_00165 2cfae0ebf6d5efd5d524f31d7e70aac7 476 SUPERFAMILY SSF81296 22 190 1.36E-57 T 15-10-2018 IPR014756 Immunoglobulin E-set AM378_00165 2cfae0ebf6d5efd5d524f31d7e70aac7 476 Gene3D G3DSA:2.70.50.50 22 191 1.5E-66 T 15-10-2018 AM378_00165 2cfae0ebf6d5efd5d524f31d7e70aac7 476 Pfam PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading 22 187 5.8E-32 T 15-10-2018 IPR004302 Cellulose/chitin-binding protein, N-terminal AM378_00165 2cfae0ebf6d5efd5d524f31d7e70aac7 476 Gene3D G3DSA:3.30.70.2150 196 305 3.3E-31 T 15-10-2018 AM378_00165 2cfae0ebf6d5efd5d524f31d7e70aac7 476 Gene3D G3DSA:2.60.40.2550 309 400 4.3E-20 T 15-10-2018 AM378_18425 5fe65cb7808a896613259b2aebe10c2c 1030 Pfam PF00082 Subtilase family 72 409 7.3E-45 T 15-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 AM378_18425 5fe65cb7808a896613259b2aebe10c2c 1030 SUPERFAMILY SSF103515 715 1030 2.09E-69 T 15-10-2018 IPR036709 Autotransporter beta-domain superfamily AM378_18425 5fe65cb7808a896613259b2aebe10c2c 1030 SUPERFAMILY SSF52743 53 420 6.94E-63 T 15-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 AM378_18425 5fe65cb7808a896613259b2aebe10c2c 1030 Pfam PF12951 Passenger-associated-transport-repeat 489 518 7.5E-10 T 15-10-2018 IPR013425 Autotransporter-associated beta strand repeat AM378_18425 5fe65cb7808a896613259b2aebe10c2c 1030 Gene3D G3DSA:2.40.128.130 707 1030 5.3E-80 T 15-10-2018 IPR036709 Autotransporter beta-domain superfamily AM378_18425 5fe65cb7808a896613259b2aebe10c2c 1030 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 488 519 8.0E-11 T 15-10-2018 IPR013425 Autotransporter-associated beta strand repeat AM378_18425 5fe65cb7808a896613259b2aebe10c2c 1030 Gene3D G3DSA:3.40.50.200 24 419 2.4E-69 T 15-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 AM378_18425 5fe65cb7808a896613259b2aebe10c2c 1030 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 553 1030 7.7E-94 T 15-10-2018 IPR006315 Outer membrane autotransporter barrel GO:0019867 AM378_18425 5fe65cb7808a896613259b2aebe10c2c 1030 PRINTS PR00723 Subtilisin serine protease family (S8) signature 136 149 3.4E-9 T 15-10-2018 IPR015500 Peptidase S8, subtilisin-related AM378_18425 5fe65cb7808a896613259b2aebe10c2c 1030 PRINTS PR00723 Subtilisin serine protease family (S8) signature 72 91 3.4E-9 T 15-10-2018 IPR015500 Peptidase S8, subtilisin-related AM378_18425 5fe65cb7808a896613259b2aebe10c2c 1030 PRINTS PR00723 Subtilisin serine protease family (S8) signature 358 374 3.4E-9 T 15-10-2018 IPR015500 Peptidase S8, subtilisin-related AM378_18425 5fe65cb7808a896613259b2aebe10c2c 1030 Pfam PF03797 Autotransporter beta-domain 760 1010 3.5E-59 T 15-10-2018 IPR005546 Autotransporter beta-domain AM378_18425 5fe65cb7808a896613259b2aebe10c2c 1030 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 359 369 - T 15-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site AM378_18425 5fe65cb7808a896613259b2aebe10c2c 1030 SMART SM00869 757 1020 1.4E-52 T 15-10-2018 IPR005546 Autotransporter beta-domain AM378_22175 9231028cf77e4072c4f0534920df271e 380 Pfam PF00144 Beta-lactamase 38 357 3.4E-62 T 15-10-2018 IPR001466 Beta-lactamase-related AM378_22175 9231028cf77e4072c4f0534920df271e 380 SUPERFAMILY SSF56601 31 358 3.29E-66 T 15-10-2018 IPR012338 Beta-lactamase/transpeptidase-like AM378_22175 9231028cf77e4072c4f0534920df271e 380 Gene3D G3DSA:3.40.710.10 26 377 4.3E-117 T 15-10-2018 AM378_23320 b13d2e6be13a9d02af06eafe31cf5e24 255 Pfam PF01746 tRNA (Guanine-1)-methyltransferase 23 221 3.4E-71 T 15-10-2018 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 AM378_23320 b13d2e6be13a9d02af06eafe31cf5e24 255 Gene3D G3DSA:3.40.1280.10 1 160 2.7E-67 T 15-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AM378_23320 b13d2e6be13a9d02af06eafe31cf5e24 255 Gene3D G3DSA:1.10.1270.20 161 254 2.3E-37 T 15-10-2018 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 AM378_23320 b13d2e6be13a9d02af06eafe31cf5e24 255 SUPERFAMILY SSF75217 2 247 3.73E-102 T 15-10-2018 IPR029028 Alpha/beta knot methyltransferases AM378_23320 b13d2e6be13a9d02af06eafe31cf5e24 255 PIRSF PIRSF000386 1 252 2.2E-102 T 15-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 AM378_23320 b13d2e6be13a9d02af06eafe31cf5e24 255 Hamap MF_00605 tRNA (guanine-N(1)-)-methyltransferase [trmD]. 1 255 119.333 T 15-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 AM378_23320 b13d2e6be13a9d02af06eafe31cf5e24 255 TIGRFAM TIGR00088 trmD: tRNA (guanine(37)-N(1))-methyltransferase 2 233 3.3E-110 T 15-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 AM378_18045 c7974b8697ba607e1123bb9c30569f43 476 Hamap MF_00484 Glycogen synthase [glgA]. 1 476 45.711 T 15-10-2018 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 AM378_18045 c7974b8697ba607e1123bb9c30569f43 476 Pfam PF08323 Starch synthase catalytic domain 2 234 1.3E-70 T 15-10-2018 IPR013534 Starch synthase, catalytic domain KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 AM378_18045 c7974b8697ba607e1123bb9c30569f43 476 SUPERFAMILY SSF53756 5 476 5.58E-115 T 15-10-2018 AM378_18045 c7974b8697ba607e1123bb9c30569f43 476 Pfam PF00534 Glycosyl transferases group 1 288 448 1.9E-13 T 15-10-2018 IPR001296 Glycosyl transferase, family 1 AM378_18045 c7974b8697ba607e1123bb9c30569f43 476 Gene3D G3DSA:3.40.50.2000 3 473 1.2E-188 T 15-10-2018 AM378_18045 c7974b8697ba607e1123bb9c30569f43 476 TIGRFAM TIGR02095 glgA: glycogen/starch synthase, ADP-glucose type 1 476 4.2E-169 T 15-10-2018 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 AM378_18045 c7974b8697ba607e1123bb9c30569f43 476 Gene3D G3DSA:3.40.50.2000 249 458 1.2E-188 T 15-10-2018 AM378_21220 78a323a70acc699131b5829633d95a05 459 Gene3D G3DSA:3.40.50.720 1 90 4.0E-36 T 15-10-2018 AM378_21220 78a323a70acc699131b5829633d95a05 459 Pfam PF01225 Mur ligase family, catalytic domain 2 100 4.7E-19 T 15-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 AM378_21220 78a323a70acc699131b5829633d95a05 459 Gene3D G3DSA:3.90.190.20 314 451 1.6E-29 T 15-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AM378_21220 78a323a70acc699131b5829633d95a05 459 SUPERFAMILY SSF53623 96 308 2.22E-48 T 15-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 AM378_21220 78a323a70acc699131b5829633d95a05 459 Pfam PF08245 Mur ligase middle domain 108 290 3.1E-18 T 15-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 AM378_21220 78a323a70acc699131b5829633d95a05 459 SUPERFAMILY SSF51984 1 90 2.09E-24 T 15-10-2018 AM378_21220 78a323a70acc699131b5829633d95a05 459 Pfam PF02875 Mur ligase family, glutamate ligase domain 312 364 2.3E-9 T 15-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 AM378_21220 78a323a70acc699131b5829633d95a05 459 SUPERFAMILY SSF53244 312 449 9.68E-37 T 15-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AM378_21220 78a323a70acc699131b5829633d95a05 459 TIGRFAM TIGR01081 mpl: UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase 2 449 4.6E-264 T 15-10-2018 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 MetaCyc: PWY-7883 AM378_21220 78a323a70acc699131b5829633d95a05 459 Gene3D G3DSA:3.40.1190.10 91 313 9.2E-52 T 15-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 AM378_21220 78a323a70acc699131b5829633d95a05 459 Hamap MF_02020 UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl-meso-2,6-diaminoheptandioate ligase [mpl]. 1 450 59.279 T 15-10-2018 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 MetaCyc: PWY-7883 AM378_20680 c0c2ba4ab05c3c21c73d9c0354af1552 249 Gene3D G3DSA:3.40.50.720 2 249 2.7E-93 T 15-10-2018 AM378_20680 c0c2ba4ab05c3c21c73d9c0354af1552 249 Pfam PF00899 ThiF family 10 242 1.5E-60 T 15-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 AM378_20680 c0c2ba4ab05c3c21c73d9c0354af1552 249 SUPERFAMILY SSF69572 2 246 1.18E-76 T 15-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 AM378_04995 bc7ae8fe761cf2a55d699c9662511df3 234 Pfam PF13302 Acetyltransferase (GNAT) domain 35 174 9.0E-14 T 15-10-2018 IPR000182 GNAT domain AM378_04995 bc7ae8fe761cf2a55d699c9662511df3 234 SUPERFAMILY SSF55729 29 198 3.61E-33 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase AM378_04995 bc7ae8fe761cf2a55d699c9662511df3 234 Gene3D G3DSA:3.40.630.30 14 233 2.2E-58 T 15-10-2018 AM378_12635 5c12d17b51a4f8d71f0a1b535d06c610 340 SUPERFAMILY SSF53850 27 334 6.37E-79 T 15-10-2018 AM378_12635 5c12d17b51a4f8d71f0a1b535d06c610 340 Gene3D G3DSA:3.40.190.10 34 303 7.2E-121 T 15-10-2018 AM378_12635 5c12d17b51a4f8d71f0a1b535d06c610 340 TIGRFAM TIGR00971 3a0106s03: sulfate ABC transporter, sulfate-binding protein 21 334 1.3E-158 T 15-10-2018 IPR005669 Thiosulphate/Sulfate-binding protein GO:0008272|GO:0015419 AM378_12635 5c12d17b51a4f8d71f0a1b535d06c610 340 Pfam PF13531 Bacterial extracellular solute-binding protein 50 288 8.1E-41 T 15-10-2018 AM378_12635 5c12d17b51a4f8d71f0a1b535d06c610 340 Gene3D G3DSA:3.40.190.10 122 333 7.2E-121 T 15-10-2018 AM378_18815 4cef409645b1f0ebab71246857487d59 464 Gene3D G3DSA:3.30.565.10 303 456 2.5E-41 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AM378_18815 4cef409645b1f0ebab71246857487d59 464 Pfam PF16527 Two-component sensor protein CpxA, periplasmic domain 82 160 1.2E-10 T 15-10-2018 IPR032404 Two-component sensor protein CpxA, periplasmic domain AM378_18815 4cef409645b1f0ebab71246857487d59 464 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 347 454 3.8E-19 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AM378_18815 4cef409645b1f0ebab71246857487d59 464 Pfam PF00512 His Kinase A (phospho-acceptor) domain 239 298 5.3E-14 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM378_18815 4cef409645b1f0ebab71246857487d59 464 SUPERFAMILY SSF47384 224 298 2.94E-16 T 15-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AM378_18815 4cef409645b1f0ebab71246857487d59 464 Gene3D G3DSA:3.30.450.210 27 147 1.3E-10 T 15-10-2018 IPR038515 CpxA, periplasmic domain superfamily AM378_18815 4cef409645b1f0ebab71246857487d59 464 PRINTS PR00344 Bacterial sensor protein C-terminal signature 415 433 1.6E-13 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM378_18815 4cef409645b1f0ebab71246857487d59 464 PRINTS PR00344 Bacterial sensor protein C-terminal signature 398 408 1.6E-13 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM378_18815 4cef409645b1f0ebab71246857487d59 464 PRINTS PR00344 Bacterial sensor protein C-terminal signature 380 394 1.6E-13 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM378_18815 4cef409645b1f0ebab71246857487d59 464 SMART SM00304 184 237 6.1E-9 T 15-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AM378_18815 4cef409645b1f0ebab71246857487d59 464 SUPERFAMILY SSF55874 289 455 1.44E-37 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AM378_18815 4cef409645b1f0ebab71246857487d59 464 Gene3D G3DSA:1.10.287.130 188 302 6.2E-38 T 15-10-2018 AM378_18815 4cef409645b1f0ebab71246857487d59 464 Pfam PF00672 HAMP domain 184 234 6.4E-7 T 15-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AM378_18815 4cef409645b1f0ebab71246857487d59 464 SMART SM00388 238 300 2.5E-15 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM378_18815 4cef409645b1f0ebab71246857487d59 464 SMART SM00387 345 455 7.7E-31 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AM378_21225 fb9306efe4d9fc7bf8894dd9d14e82c0 87 Gene3D G3DSA:3.30.1660.10 22 87 3.5E-23 T 15-10-2018 IPR025543 Dodecin-like AM378_21225 fb9306efe4d9fc7bf8894dd9d14e82c0 87 Pfam PF07338 Protein of unknown function (DUF1471) 34 87 1.9E-22 T 15-10-2018 IPR010854 Domain of unknown function DUF1471 AM378_21225 fb9306efe4d9fc7bf8894dd9d14e82c0 87 SUPERFAMILY SSF159871 3 87 4.19E-27 T 15-10-2018 IPR036275 YdgH-like superfamily AM378_23130 a9dd16096d17ec1c51091278c12ccfea 235 Hamap MF_00108 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [ispD]. 10 230 43.163 T 15-10-2018 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 AM378_23130 a9dd16096d17ec1c51091278c12ccfea 235 Pfam PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 11 232 1.5E-81 T 15-10-2018 IPR034683 Cytidylyltransferase IspD/TarI GO:0070567 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 AM378_23130 a9dd16096d17ec1c51091278c12ccfea 235 SUPERFAMILY SSF53448 11 230 4.77E-59 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AM378_23130 a9dd16096d17ec1c51091278c12ccfea 235 TIGRFAM TIGR00453 ispD: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 12 229 2.5E-72 T 15-10-2018 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 AM378_23130 a9dd16096d17ec1c51091278c12ccfea 235 ProSitePatterns PS01295 4-diphosphocytidyl-2C-methyl-D-erythritol synthase signature. 105 112 - T 15-10-2018 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site GO:0003824|GO:0008299 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 AM378_23130 a9dd16096d17ec1c51091278c12ccfea 235 Gene3D G3DSA:3.90.550.10 7 234 1.1E-77 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AM378_06830 e8b6957ec4e8a7beb6b9f8cef6ef1c53 771 Gene3D G3DSA:3.30.830.10 6 226 6.8E-50 T 15-10-2018 AM378_06830 e8b6957ec4e8a7beb6b9f8cef6ef1c53 771 ProSitePatterns PS00143 Insulinase family, zinc-binding region signature. 36 59 - T 15-10-2018 IPR001431 Peptidase M16, zinc-binding site GO:0004222|GO:0006508 AM378_06830 e8b6957ec4e8a7beb6b9f8cef6ef1c53 771 SUPERFAMILY SSF63411 8 211 7.14E-37 T 15-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AM378_06830 e8b6957ec4e8a7beb6b9f8cef6ef1c53 771 Pfam PF00675 Insulinase (Peptidase family M16) 18 135 1.8E-31 T 15-10-2018 IPR011765 Peptidase M16, N-terminal AM378_06830 e8b6957ec4e8a7beb6b9f8cef6ef1c53 771 Gene3D G3DSA:3.30.830.10 607 769 8.6E-19 T 15-10-2018 AM378_06830 e8b6957ec4e8a7beb6b9f8cef6ef1c53 771 TIGRFAM TIGR02110 PQQ_syn_pqqF: coenzyme PQQ biosynthesis protein PqqF 10 702 2.7E-161 T 15-10-2018 IPR011844 Coenzyme PQQ biosynthesis protein PqqF GO:0004222|GO:0006508|GO:0008270|GO:0018189 AM378_06830 e8b6957ec4e8a7beb6b9f8cef6ef1c53 771 Pfam PF05193 Peptidase M16 inactive domain 178 323 2.3E-8 T 15-10-2018 IPR007863 Peptidase M16, C-terminal AM378_06830 e8b6957ec4e8a7beb6b9f8cef6ef1c53 771 SUPERFAMILY SSF63411 615 741 1.41E-16 T 15-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AM378_17410 4db4e244ba50bb188b209700dbad63f2 329 SMART SM00662 23 234 2.5E-105 T 15-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM378_17410 4db4e244ba50bb188b209700dbad63f2 329 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 245 308 7.5E-24 T 15-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM378_17410 4db4e244ba50bb188b209700dbad63f2 329 Gene3D G3DSA:3.30.1360.10 17 228 6.8E-86 T 15-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM378_17410 4db4e244ba50bb188b209700dbad63f2 329 Hamap MF_00059 DNA-directed RNA polymerase subunit alpha [rpoA]. 5 317 34.587 T 15-10-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM378_17410 4db4e244ba50bb188b209700dbad63f2 329 Gene3D G3DSA:2.170.120.12 53 177 6.8E-86 T 15-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM378_17410 4db4e244ba50bb188b209700dbad63f2 329 TIGRFAM TIGR02027 rpoA: DNA-directed RNA polymerase, alpha subunit 24 316 9.4E-113 T 15-10-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM378_17410 4db4e244ba50bb188b209700dbad63f2 329 ProDom PD001179 RNA POLYMERASE ALPHA DNA-DIRECTED SUBUNIT CHAIN NUCLEOTIDYLTRANSFERASE TRANSFERASE TRANSCRIPTION TRANSCRIPTASE 256 329 2.0E-36 T 15-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM378_17410 4db4e244ba50bb188b209700dbad63f2 329 SUPERFAMILY SSF47789 251 325 1.27E-25 T 15-10-2018 AM378_17410 4db4e244ba50bb188b209700dbad63f2 329 SUPERFAMILY SSF55257 6 231 1.57E-30 T 15-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM378_17410 4db4e244ba50bb188b209700dbad63f2 329 SUPERFAMILY SSF56553 53 178 3.31E-41 T 15-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM378_17410 4db4e244ba50bb188b209700dbad63f2 329 Pfam PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain 29 228 3.9E-24 T 15-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM378_17410 4db4e244ba50bb188b209700dbad63f2 329 Gene3D G3DSA:1.10.150.20 244 329 9.7E-39 T 15-10-2018 AM378_17410 4db4e244ba50bb188b209700dbad63f2 329 Pfam PF01000 RNA polymerase Rpb3/RpoA insert domain 60 156 1.8E-23 T 15-10-2018 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM378_09480 d056f57176e54525d84acada6db919b3 327 Gene3D G3DSA:1.10.443.10 163 324 1.1E-45 T 15-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 AM378_09480 d056f57176e54525d84acada6db919b3 327 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 80 135 9.9E-5 T 15-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 AM378_09480 d056f57176e54525d84acada6db919b3 327 SUPERFAMILY SSF56349 60 315 1.38E-46 T 15-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AM378_09480 d056f57176e54525d84acada6db919b3 327 Pfam PF00589 Phage integrase family 164 307 1.0E-22 T 15-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AM378_05155 cae84c2a3b91d4601eddfdff1973f1ad 253 Pfam PF07722 Peptidase C26 8 224 1.7E-65 T 15-10-2018 IPR011697 Peptidase C26 GO:0016787 Reactome: R-HSA-6798695 AM378_05155 cae84c2a3b91d4601eddfdff1973f1ad 253 SUPERFAMILY SSF52317 6 248 1.53E-40 T 15-10-2018 IPR029062 Class I glutamine amidotransferase-like AM378_05155 cae84c2a3b91d4601eddfdff1973f1ad 253 Gene3D G3DSA:3.40.50.880 5 252 1.1E-65 T 15-10-2018 IPR029062 Class I glutamine amidotransferase-like AM378_19355 d59b6db9b9dacda9c36d300d56f7fa6e 237 SUPERFAMILY SSF161098 14 221 1.7E-41 T 15-10-2018 IPR035906 MetI-like superfamily AM378_19355 d59b6db9b9dacda9c36d300d56f7fa6e 237 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 34 219 7.8E-15 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AM378_19355 d59b6db9b9dacda9c36d300d56f7fa6e 237 Gene3D G3DSA:1.10.3720.10 1 232 6.9E-49 T 15-10-2018 IPR035906 MetI-like superfamily AM378_19355 d59b6db9b9dacda9c36d300d56f7fa6e 237 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 14 81 2.7E-17 T 15-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 AM378_17515 3cba96a2416f781cc6a27b130af8c072 92 Pfam PF00203 Ribosomal protein S19 3 83 2.2E-35 T 15-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM378_17515 3cba96a2416f781cc6a27b130af8c072 92 TIGRFAM TIGR01050 rpsS_bact: ribosomal protein uS19 1 91 1.6E-45 T 15-10-2018 IPR005732 Ribosomal protein S19, bacterial-type GO:0003735|GO:0006412|GO:0015935 AM378_17515 3cba96a2416f781cc6a27b130af8c072 92 PIRSF PIRSF002144 1 92 4.4E-31 T 15-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM378_17515 3cba96a2416f781cc6a27b130af8c072 92 PRINTS PR00975 Ribosomal protein S19 family signature 53 65 1.1E-24 T 15-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM378_17515 3cba96a2416f781cc6a27b130af8c072 92 PRINTS PR00975 Ribosomal protein S19 family signature 33 52 1.1E-24 T 15-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM378_17515 3cba96a2416f781cc6a27b130af8c072 92 PRINTS PR00975 Ribosomal protein S19 family signature 65 80 1.1E-24 T 15-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM378_17515 3cba96a2416f781cc6a27b130af8c072 92 Hamap MF_00531 30S ribosomal protein S19 [rpsS]. 1 89 25.439 T 15-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM378_17515 3cba96a2416f781cc6a27b130af8c072 92 Gene3D G3DSA:3.30.860.10 1 92 5.3E-43 T 15-10-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM378_17515 3cba96a2416f781cc6a27b130af8c072 92 SUPERFAMILY SSF54570 3 84 6.02E-35 T 15-10-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM378_17515 3cba96a2416f781cc6a27b130af8c072 92 ProSitePatterns PS00323 Ribosomal protein S19 signature. 53 77 - T 15-10-2018 IPR020934 Ribosomal protein S19 conserved site GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM378_10845 c631ed2fdb471b380dd8413055a58568 228 Pfam PF00072 Response regulator receiver domain 6 117 3.2E-20 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM378_10845 c631ed2fdb471b380dd8413055a58568 228 Gene3D G3DSA:3.40.50.2300 2 145 1.6E-25 T 15-10-2018 AM378_10845 c631ed2fdb471b380dd8413055a58568 228 SUPERFAMILY SSF52172 3 190 1.37E-30 T 15-10-2018 IPR011006 CheY-like superfamily AM378_10845 c631ed2fdb471b380dd8413055a58568 228 SMART SM00448 4 117 4.6E-23 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM378_10845 c631ed2fdb471b380dd8413055a58568 228 PIRSF PIRSF006171 2 227 3.9E-74 T 15-10-2018 IPR024187 Signal transduction response regulator, citrate/malate metabolism GO:0000160|GO:0003700 AM378_10845 c631ed2fdb471b380dd8413055a58568 228 Pfam PF12431 Transcriptional regulator 133 161 3.3E-9 T 15-10-2018 IPR028141 Transcriptional regulator AM378_04545 f573c3ad370d5f1871722a844c9d1996 317 SUPERFAMILY SSF53474 7 313 1.5E-60 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold AM378_04545 f573c3ad370d5f1871722a844c9d1996 317 Pfam PF00561 alpha/beta hydrolase fold 41 296 5.3E-32 T 15-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AM378_04545 f573c3ad370d5f1871722a844c9d1996 317 PIRSF PIRSF006431 2 317 1.0E-142 T 15-10-2018 IPR005944 Proline iminopeptidase GO:0004177|GO:0005737|GO:0006508 KEGG: 00330+3.4.11.5 AM378_04545 f573c3ad370d5f1871722a844c9d1996 317 TIGRFAM TIGR01249 pro_imino_pep_1: prolyl aminopeptidase 13 314 1.9E-126 T 15-10-2018 IPR005944 Proline iminopeptidase GO:0004177|GO:0005737|GO:0006508 KEGG: 00330+3.4.11.5 AM378_04545 f573c3ad370d5f1871722a844c9d1996 317 PRINTS PR00111 Alpha/beta hydrolase fold signature 63 78 1.8E-6 T 15-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AM378_04545 f573c3ad370d5f1871722a844c9d1996 317 PRINTS PR00111 Alpha/beta hydrolase fold signature 123 136 1.8E-6 T 15-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AM378_04545 f573c3ad370d5f1871722a844c9d1996 317 PRINTS PR00111 Alpha/beta hydrolase fold signature 109 122 1.8E-6 T 15-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AM378_04545 f573c3ad370d5f1871722a844c9d1996 317 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 40 48 8.5E-14 T 15-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 AM378_04545 f573c3ad370d5f1871722a844c9d1996 317 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 66 77 8.5E-14 T 15-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 AM378_04545 f573c3ad370d5f1871722a844c9d1996 317 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 109 123 8.5E-14 T 15-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 AM378_04545 f573c3ad370d5f1871722a844c9d1996 317 Gene3D G3DSA:3.40.50.1820 1 317 2.4E-117 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold AM378_17535 0011b8363208cfdf6bd3f39248689f62 209 Gene3D G3DSA:2.40.50.620 32 94 3.2E-15 T 15-10-2018 AM378_17535 0011b8363208cfdf6bd3f39248689f62 209 Hamap MF_01325_B 50S ribosomal protein L3 [rplC]. 1 207 40.924 T 15-10-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM378_17535 0011b8363208cfdf6bd3f39248689f62 209 Gene3D G3DSA:2.40.30.10 128 209 4.5E-18 T 15-10-2018 AM378_17535 0011b8363208cfdf6bd3f39248689f62 209 SUPERFAMILY SSF50447 1 208 2.21E-79 T 15-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily AM378_17535 0011b8363208cfdf6bd3f39248689f62 209 TIGRFAM TIGR03625 L3_bact: 50S ribosomal protein uL3 3 204 2.6E-92 T 15-10-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM378_17535 0011b8363208cfdf6bd3f39248689f62 209 Pfam PF00297 Ribosomal protein L3 66 182 1.5E-12 T 15-10-2018 IPR000597 Ribosomal protein L3 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM378_17535 0011b8363208cfdf6bd3f39248689f62 209 ProSitePatterns PS00474 Ribosomal protein L3 signature. 101 124 - T 15-10-2018 IPR019926 Ribosomal protein L3, conserved site AM378_11305 a5b477bab7bd589e617630da4a48a2c0 360 Gene3D G3DSA:1.10.3470.10 27 359 1.4E-98 T 15-10-2018 IPR037294 ABC transporter, BtuC-like AM378_11305 a5b477bab7bd589e617630da4a48a2c0 360 Pfam PF01032 FecCD transport family 42 355 5.9E-85 T 15-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 AM378_11305 a5b477bab7bd589e617630da4a48a2c0 360 SUPERFAMILY SSF81345 24 355 4.45E-79 T 15-10-2018 IPR037294 ABC transporter, BtuC-like AM378_00890 4700a8693224c5e7f679f27213a7899e 257 Pfam PF12697 Alpha/beta hydrolase family 21 248 2.9E-23 T 15-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AM378_00890 4700a8693224c5e7f679f27213a7899e 257 SUPERFAMILY SSF53474 6 255 7.22E-54 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold AM378_00890 4700a8693224c5e7f679f27213a7899e 257 PRINTS PR00111 Alpha/beta hydrolase fold signature 101 114 1.8E-5 T 15-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AM378_00890 4700a8693224c5e7f679f27213a7899e 257 PRINTS PR00111 Alpha/beta hydrolase fold signature 87 100 1.8E-5 T 15-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AM378_00890 4700a8693224c5e7f679f27213a7899e 257 PRINTS PR00111 Alpha/beta hydrolase fold signature 44 59 1.8E-5 T 15-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AM378_00890 4700a8693224c5e7f679f27213a7899e 257 Gene3D G3DSA:3.40.50.1820 6 255 5.1E-75 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold AM378_18880 4ef7b33b068f41688b6f6309d7d61119 398 Pfam PF00155 Aminotransferase class I and II 43 386 8.2E-77 T 15-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AM378_18880 4ef7b33b068f41688b6f6309d7d61119 398 TIGRFAM TIGR01822 2am3keto_CoA: glycine C-acetyltransferase 5 397 5.9E-218 T 15-10-2018 IPR011282 2-amino-3-ketobutyrate coenzyme A ligase GO:0006567|GO:0008890 KEGG: 00260+2.3.1.29|Reactome: R-HSA-8849175 AM378_18880 4ef7b33b068f41688b6f6309d7d61119 398 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 241 250 - T 15-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 AM378_18880 4ef7b33b068f41688b6f6309d7d61119 398 SUPERFAMILY SSF53383 5 396 2.99E-126 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM378_18880 4ef7b33b068f41688b6f6309d7d61119 398 Hamap MF_00985 2-amino-3-ketobutyrate coenzyme A ligase [kbl]. 2 395 53.679 T 15-10-2018 IPR011282 2-amino-3-ketobutyrate coenzyme A ligase GO:0006567|GO:0008890 KEGG: 00260+2.3.1.29|Reactome: R-HSA-8849175 AM378_18880 4ef7b33b068f41688b6f6309d7d61119 398 Gene3D G3DSA:3.40.640.10 58 296 2.2E-139 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AM378_18880 4ef7b33b068f41688b6f6309d7d61119 398 Gene3D G3DSA:3.90.1150.10 38 388 2.2E-139 T 15-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AM378_01280 0e798a62b984eda0cd81ac17eb8510ac 355 Gene3D G3DSA:2.40.50.100 288 351 9.9E-15 T 15-10-2018 AM378_01280 0e798a62b984eda0cd81ac17eb8510ac 355 SUPERFAMILY SSF52540 9 224 4.99E-57 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_01280 0e798a62b984eda0cd81ac17eb8510ac 355 Pfam PF03459 TOBE domain 290 350 1.6E-17 T 15-10-2018 IPR005116 Transport-associated OB, type 1 AM378_01280 0e798a62b984eda0cd81ac17eb8510ac 355 TIGRFAM TIGR02142 modC_ABC: molybdate ABC transporter, ATP-binding protein 2 350 2.5E-151 T 15-10-2018 IPR011868 Molybdate ABC transporter, ATP-binding protein GO:0005524|GO:0015098|GO:0015689|GO:0016020 AM378_01280 0e798a62b984eda0cd81ac17eb8510ac 355 Gene3D G3DSA:3.40.50.300 5 233 7.5E-53 T 15-10-2018 AM378_01280 0e798a62b984eda0cd81ac17eb8510ac 355 Pfam PF00005 ABC transporter 16 156 1.1E-27 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM378_01280 0e798a62b984eda0cd81ac17eb8510ac 355 ProSitePatterns PS00211 ABC transporters family signature. 129 143 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM378_01280 0e798a62b984eda0cd81ac17eb8510ac 355 TIGRFAM TIGR00638 Mop: molybdenum-pterin binding domain 289 350 2.5E-18 T 15-10-2018 IPR004606 Molybdenum-pterin binding GO:0015689 AM378_01280 0e798a62b984eda0cd81ac17eb8510ac 355 SMART SM00382 23 206 2.0E-10 T 15-10-2018 IPR003593 AAA+ ATPase domain AM378_01280 0e798a62b984eda0cd81ac17eb8510ac 355 SUPERFAMILY SSF50331 235 350 4.25E-22 T 15-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal AM378_18930 f0a877df08590d57205cef3385d784d4 375 Pfam PF00534 Glycosyl transferases group 1 194 351 3.5E-29 T 15-10-2018 IPR001296 Glycosyl transferase, family 1 AM378_18930 f0a877df08590d57205cef3385d784d4 375 Gene3D G3DSA:3.40.50.2000 180 336 2.3E-108 T 15-10-2018 AM378_18930 f0a877df08590d57205cef3385d784d4 375 SUPERFAMILY SSF53756 5 373 2.09E-74 T 15-10-2018 AM378_18930 f0a877df08590d57205cef3385d784d4 375 Gene3D G3DSA:3.40.50.2000 15 179 2.3E-108 T 15-10-2018 AM378_18930 f0a877df08590d57205cef3385d784d4 375 Pfam PF13439 Glycosyltransferase Family 4 17 182 3.3E-20 T 15-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 AM378_19510 6e1f1de8f420e4b8c97e77a8c93af952 325 SUPERFAMILY SSF51735 100 288 4.64E-59 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily AM378_19510 6e1f1de8f420e4b8c97e77a8c93af952 325 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 226 242 - T 15-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site AM378_19510 6e1f1de8f420e4b8c97e77a8c93af952 325 SUPERFAMILY SSF52283 1 134 1.76E-29 T 15-10-2018 AM378_19510 6e1f1de8f420e4b8c97e77a8c93af952 325 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 108 287 3.4E-62 T 15-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 AM378_19510 6e1f1de8f420e4b8c97e77a8c93af952 325 Hamap MF_01667 Glyoxylate/hydroxypyruvate reductase B [ghrB]. 1 324 68.473 T 15-10-2018 IPR023756 Glyoxylate/hydroxypyruvate reductase B GO:0016618|GO:0030267|GO:0055114 KEGG: 00260+1.1.1.81|KEGG: 00620+1.1.1.79|KEGG: 00630+1.1.1.79+1.1.1.81|MetaCyc: PWY-1622 AM378_19510 6e1f1de8f420e4b8c97e77a8c93af952 325 Gene3D G3DSA:3.40.50.720 5 312 3.2E-108 T 15-10-2018 AM378_19510 6e1f1de8f420e4b8c97e77a8c93af952 325 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 5 319 8.1E-28 T 15-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 AM378_19510 6e1f1de8f420e4b8c97e77a8c93af952 325 Gene3D G3DSA:3.40.50.720 97 287 3.2E-108 T 15-10-2018 AM378_11610 eb6c53f032063adb264cae5f55d31e31 216 Pfam PF00072 Response regulator receiver domain 6 120 6.1E-25 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM378_11610 eb6c53f032063adb264cae5f55d31e31 216 Gene3D G3DSA:1.10.10.10 124 215 1.3E-23 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_11610 eb6c53f032063adb264cae5f55d31e31 216 SMART SM00448 4 120 3.0E-14 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM378_11610 eb6c53f032063adb264cae5f55d31e31 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 151 165 4.0E-8 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM378_11610 eb6c53f032063adb264cae5f55d31e31 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 165 181 4.0E-8 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM378_11610 eb6c53f032063adb264cae5f55d31e31 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 181 193 4.0E-8 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM378_11610 eb6c53f032063adb264cae5f55d31e31 216 Gene3D G3DSA:3.40.50.2300 1 123 1.0E-19 T 15-10-2018 AM378_11610 eb6c53f032063adb264cae5f55d31e31 216 SUPERFAMILY SSF52172 3 135 4.13E-21 T 15-10-2018 IPR011006 CheY-like superfamily AM378_11610 eb6c53f032063adb264cae5f55d31e31 216 Pfam PF00196 Bacterial regulatory proteins, luxR family 150 204 1.1E-18 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM378_11610 eb6c53f032063adb264cae5f55d31e31 216 SMART SM00421 148 205 4.2E-16 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM378_11610 eb6c53f032063adb264cae5f55d31e31 216 Hamap MF_00981 Transcriptional regulatory protein RcsB [rcsB]. 1 214 51.851 T 15-10-2018 IPR030864 Transcriptional regulatory protein RcsB GO:0000160|GO:0006355 AM378_11610 eb6c53f032063adb264cae5f55d31e31 216 SUPERFAMILY SSF46894 146 208 2.01E-16 T 15-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AM378_11610 eb6c53f032063adb264cae5f55d31e31 216 ProSitePatterns PS00622 LuxR-type HTH domain signature. 165 192 - T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM378_10740 008214478f32f613d3ebc601fda1f548 298 SUPERFAMILY SSF46785 3 84 3.76E-20 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM378_10740 008214478f32f613d3ebc601fda1f548 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 2.0E-5 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_10740 008214478f32f613d3ebc601fda1f548 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 2.0E-5 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_10740 008214478f32f613d3ebc601fda1f548 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 2.0E-5 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_10740 008214478f32f613d3ebc601fda1f548 298 SUPERFAMILY SSF53850 82 292 2.35E-30 T 15-10-2018 AM378_10740 008214478f32f613d3ebc601fda1f548 298 Gene3D G3DSA:3.40.190.10 102 287 3.8E-38 T 15-10-2018 AM378_10740 008214478f32f613d3ebc601fda1f548 298 Pfam PF03466 LysR substrate binding domain 89 291 7.3E-29 T 15-10-2018 IPR005119 LysR, substrate-binding AM378_10740 008214478f32f613d3ebc601fda1f548 298 Gene3D G3DSA:1.10.10.10 5 93 3.1E-23 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_10740 008214478f32f613d3ebc601fda1f548 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 66 2.7E-19 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_10740 008214478f32f613d3ebc601fda1f548 298 Gene3D G3DSA:3.40.190.10 163 261 3.8E-38 T 15-10-2018 AM378_23500 2d0c3b034ed3292a8fe5f9bb324b4f98 386 Gene3D G3DSA:3.90.1150.10 20 383 2.0E-138 T 15-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AM378_23500 2d0c3b034ed3292a8fe5f9bb324b4f98 386 SUPERFAMILY SSF53383 11 385 2.04E-96 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM378_23500 2d0c3b034ed3292a8fe5f9bb324b4f98 386 Gene3D G3DSA:3.40.640.10 45 284 2.0E-138 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AM378_23500 2d0c3b034ed3292a8fe5f9bb324b4f98 386 Pfam PF00155 Aminotransferase class I and II 32 383 1.4E-53 T 15-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AM378_09410 9061f096e287bdffede6e56658c8e5ec 281 Pfam PF05929 Phage capsid scaffolding protein (GPO) serine peptidase 6 281 2.7E-104 T 15-10-2018 IPR009228 Capsid scaffolding protein GpO GO:0019069 AM378_15730 1499f87a3fe4f40c00f7bff8562ab4de 431 SUPERFAMILY SSF51905 166 333 1.83E-12 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AM378_15730 1499f87a3fe4f40c00f7bff8562ab4de 431 Pfam PF13434 L-lysine 6-monooxygenase (NADPH-requiring) 4 334 1.5E-107 T 15-10-2018 IPR025700 L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase AM378_15730 1499f87a3fe4f40c00f7bff8562ab4de 431 Gene3D G3DSA:3.50.50.60 1 416 1.3E-112 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AM378_15730 1499f87a3fe4f40c00f7bff8562ab4de 431 SUPERFAMILY SSF51905 1 220 1.04E-16 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AM378_06790 33e535e7b767e379966d41fb1d3877a1 98 Gene3D G3DSA:3.30.70.100 1 95 1.6E-30 T 15-10-2018 AM378_06790 33e535e7b767e379966d41fb1d3877a1 98 Pfam PF07045 Domain of unknown function (DUF1330) 2 94 3.0E-31 T 15-10-2018 IPR010753 Domain of unknown function DUF1330 AM378_06790 33e535e7b767e379966d41fb1d3877a1 98 SUPERFAMILY SSF54909 1 94 1.13E-27 T 15-10-2018 IPR011008 Dimeric alpha-beta barrel AM378_15620 de516953dea5e1f8671b6da29b602204 240 Pfam PF11101 Protein of unknown function (DUF2884) 25 239 6.0E-48 T 15-10-2018 IPR021307 Protein of unknown function DUF2884 AM378_14620 ad487b51194344a98182230e2ce61469 259 Pfam PF03609 PTS system sorbose-specific iic component 3 233 2.9E-73 T 15-10-2018 IPR004700 Phosphotransferase system, mannose/fructose/sorbose family, IIC subunit GO:0009401|GO:0016021 AM378_15925 91462205d0d45cb664e15762180990d7 193 Gene3D G3DSA:3.40.50.360 1 191 1.2E-61 T 15-10-2018 IPR029039 Flavoprotein-like superfamily AM378_15925 91462205d0d45cb664e15762180990d7 193 SUPERFAMILY SSF52218 1 192 3.67E-42 T 15-10-2018 IPR029039 Flavoprotein-like superfamily AM378_15925 91462205d0d45cb664e15762180990d7 193 Pfam PF02525 Flavodoxin-like fold 3 188 3.7E-37 T 15-10-2018 IPR003680 Flavodoxin-like fold AM378_00430 c303125a963b8ee88b9cf79625a9622b 446 SUPERFAMILY SSF103473 16 440 1.05E-79 T 15-10-2018 IPR036259 MFS transporter superfamily AM378_00430 c303125a963b8ee88b9cf79625a9622b 446 Pfam PF07690 Major Facilitator Superfamily 54 405 2.3E-42 T 15-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM378_00430 c303125a963b8ee88b9cf79625a9622b 446 Gene3D G3DSA:1.20.1250.20 16 442 2.1E-74 T 15-10-2018 AM378_14505 a882ac948a5cfaf2c4287501c83fd13a 290 TIGRFAM TIGR00544 lgt: prolipoprotein diacylglyceryl transferase 1 287 8.1E-106 T 15-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 AM378_14505 a882ac948a5cfaf2c4287501c83fd13a 290 Hamap MF_01147 Prolipoprotein diacylglyceryl transferase [lgt]. 10 284 20.587 T 15-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 AM378_14505 a882ac948a5cfaf2c4287501c83fd13a 290 ProSitePatterns PS01311 Prolipoprotein diacylglyceryl transferase signature. 142 154 - T 15-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 AM378_14505 a882ac948a5cfaf2c4287501c83fd13a 290 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 13 279 1.0E-79 T 15-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 AM378_18805 7ba0d54220e62e8af50977a8221212ab 159 Gene3D G3DSA:1.20.120.1490 43 151 1.1E-39 T 15-10-2018 AM378_18805 7ba0d54220e62e8af50977a8221212ab 159 Pfam PF07813 LTXXQ motif family protein 43 138 1.4E-20 T 15-10-2018 IPR012899 LTXXQ motif family protein GO:0042597 AM378_18805 7ba0d54220e62e8af50977a8221212ab 159 PIRSF PIRSF034445 1 148 4.1E-29 T 15-10-2018 IPR012899 LTXXQ motif family protein GO:0042597 AM378_06105 ff7fc078bf0baccb9ed3a4f3fa3fd640 387 Gene3D G3DSA:3.40.710.10 1 384 6.0E-113 T 15-10-2018 AM378_06105 ff7fc078bf0baccb9ed3a4f3fa3fd640 387 SUPERFAMILY SSF56601 8 382 2.02E-90 T 15-10-2018 IPR012338 Beta-lactamase/transpeptidase-like AM378_06105 ff7fc078bf0baccb9ed3a4f3fa3fd640 387 Pfam PF00144 Beta-lactamase 14 367 3.0E-66 T 15-10-2018 IPR001466 Beta-lactamase-related AM378_15120 e870e365dd0c636d64083ba38bd028e7 156 SUPERFAMILY SSF51197 1 151 5.22E-39 T 15-10-2018 AM378_15120 e870e365dd0c636d64083ba38bd028e7 156 Gene3D G3DSA:2.60.120.370 1 152 1.9E-42 T 15-10-2018 IPR037012 YhcH/YjgK/YiaL superfamily AM378_15120 e870e365dd0c636d64083ba38bd028e7 156 Pfam PF04074 Domain of unknown function (DUF386) 1 150 6.1E-39 T 15-10-2018 IPR004375 YhcH/YjgK/YiaL family AM378_15120 e870e365dd0c636d64083ba38bd028e7 156 TIGRFAM TIGR00022 TIGR00022: YhcH/YjgK/YiaL family protein 1 152 7.3E-39 T 15-10-2018 IPR004375 YhcH/YjgK/YiaL family AM378_06660 d7a95c76c986f705e6143aac6b66d2df 295 SUPERFAMILY SSF53850 89 292 3.8E-40 T 15-10-2018 AM378_06660 d7a95c76c986f705e6143aac6b66d2df 295 Gene3D G3DSA:3.40.190.10 91 288 4.3E-59 T 15-10-2018 AM378_06660 d7a95c76c986f705e6143aac6b66d2df 295 Gene3D G3DSA:3.40.190.10 161 263 4.3E-59 T 15-10-2018 AM378_06660 d7a95c76c986f705e6143aac6b66d2df 295 SUPERFAMILY SSF46785 4 87 9.98E-20 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM378_06660 d7a95c76c986f705e6143aac6b66d2df 295 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 63 7.4E-17 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_06660 d7a95c76c986f705e6143aac6b66d2df 295 Gene3D G3DSA:1.10.10.10 2 87 8.5E-25 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_06660 d7a95c76c986f705e6143aac6b66d2df 295 Pfam PF03466 LysR substrate binding domain 88 291 5.3E-41 T 15-10-2018 IPR005119 LysR, substrate-binding AM378_14715 2f5d5b9ee11aa4144e1bb3da63bc923d 650 ProSitePatterns PS00211 ABC transporters family signature. 149 163 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM378_14715 2f5d5b9ee11aa4144e1bb3da63bc923d 650 SMART SM00382 37 224 1.5E-13 T 15-10-2018 IPR003593 AAA+ ATPase domain AM378_14715 2f5d5b9ee11aa4144e1bb3da63bc923d 650 SUPERFAMILY SSF52540 8 231 1.1E-65 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_14715 2f5d5b9ee11aa4144e1bb3da63bc923d 650 Gene3D G3DSA:3.40.50.300 6 260 2.3E-68 T 15-10-2018 AM378_14715 2f5d5b9ee11aa4144e1bb3da63bc923d 650 Pfam PF00005 ABC transporter 28 176 1.0E-32 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM378_14715 2f5d5b9ee11aa4144e1bb3da63bc923d 650 Pfam PF12704 MacB-like periplasmic core domain 276 492 5.6E-32 T 15-10-2018 IPR025857 MacB-like periplasmic core domain AM378_14715 2f5d5b9ee11aa4144e1bb3da63bc923d 650 Pfam PF02687 FtsX-like permease family 556 643 3.5E-9 T 15-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 AM378_14660 4b223a54e4a45cb40e871edc3d515c95 227 Pfam PF00196 Bacterial regulatory proteins, luxR family 158 209 5.6E-12 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM378_14660 4b223a54e4a45cb40e871edc3d515c95 227 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 172 188 4.4E-5 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM378_14660 4b223a54e4a45cb40e871edc3d515c95 227 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 158 172 4.4E-5 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM378_14660 4b223a54e4a45cb40e871edc3d515c95 227 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 188 200 4.4E-5 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM378_14660 4b223a54e4a45cb40e871edc3d515c95 227 SMART SM00421 155 212 2.8E-7 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM378_14660 4b223a54e4a45cb40e871edc3d515c95 227 SUPERFAMILY SSF46894 146 212 3.37E-14 T 15-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AM378_14660 4b223a54e4a45cb40e871edc3d515c95 227 Gene3D G3DSA:3.40.50.12740 9 215 9.9E-20 T 15-10-2018 AM378_15875 f3c0e3e3798c4fae389f3ff673227872 722 TIGRFAM TIGR03904 SAM_YgiQ: uncharacterized radical SAM protein YgiQ 29 642 1.1E-266 T 15-10-2018 IPR022946 Uncharacterised protein family UPF0313 AM378_15875 f3c0e3e3798c4fae389f3ff673227872 722 Pfam PF08497 Radical SAM N-terminal 29 377 3.0E-147 T 15-10-2018 IPR013704 Uncharacterised protein family UPF0313, N-terminal AM378_15875 f3c0e3e3798c4fae389f3ff673227872 722 SUPERFAMILY SSF102114 355 654 3.01E-11 T 15-10-2018 AM378_15875 f3c0e3e3798c4fae389f3ff673227872 722 Pfam PF04055 Radical SAM superfamily 378 583 1.6E-19 T 15-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AM378_15875 f3c0e3e3798c4fae389f3ff673227872 722 Gene3D G3DSA:3.80.30.20 373 624 1.6E-13 T 15-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe AM378_15875 f3c0e3e3798c4fae389f3ff673227872 722 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 378 398 - T 15-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 AM378_15875 f3c0e3e3798c4fae389f3ff673227872 722 Pfam PF11842 Domain of unknown function (DUF3362) 592 698 7.1E-43 T 15-10-2018 IPR024560 Uncharacterised protein family UPF0313, C-terminal AM378_15875 f3c0e3e3798c4fae389f3ff673227872 722 Hamap MF_01251 UPF0313 protein YgiQ [ygiQ]. 29 644 50.774 T 15-10-2018 IPR022946 Uncharacterised protein family UPF0313 AM378_15875 f3c0e3e3798c4fae389f3ff673227872 722 SMART SM00729 374 624 9.5E-5 T 15-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 AM378_06930 35be39287df2ea6013818b37d65f63e1 263 Gene3D G3DSA:2.60.120.10 4 93 9.4E-6 T 15-10-2018 IPR014710 RmlC-like jelly roll fold AM378_06930 35be39287df2ea6013818b37d65f63e1 263 SUPERFAMILY SSF46689 217 261 4.48E-7 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AM378_06930 35be39287df2ea6013818b37d65f63e1 263 Pfam PF12833 Helix-turn-helix domain 186 261 4.0E-18 T 15-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM378_06930 35be39287df2ea6013818b37d65f63e1 263 SMART SM00342 180 262 1.1E-19 T 15-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM378_06930 35be39287df2ea6013818b37d65f63e1 263 Gene3D G3DSA:1.10.10.60 163 263 4.1E-17 T 15-10-2018 AM378_06930 35be39287df2ea6013818b37d65f63e1 263 SUPERFAMILY SSF51182 31 189 3.56E-14 T 15-10-2018 IPR011051 RmlC-like cupin domain superfamily AM378_06930 35be39287df2ea6013818b37d65f63e1 263 Pfam PF02311 AraC-like ligand binding domain 31 143 5.8E-7 T 15-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 AM378_16545 39a06e606b6a76182f0c85e52ec5ac8d 166 PIRSF PIRSF005276 3 166 4.4E-61 T 15-10-2018 IPR007481 Stringent starvation protein B AM378_16545 39a06e606b6a76182f0c85e52ec5ac8d 166 SUPERFAMILY SSF101738 3 116 8.89E-50 T 15-10-2018 IPR036760 SspB-like superfamily AM378_16545 39a06e606b6a76182f0c85e52ec5ac8d 166 Pfam PF04386 Stringent starvation protein B 9 166 7.0E-42 T 15-10-2018 IPR007481 Stringent starvation protein B AM378_16545 39a06e606b6a76182f0c85e52ec5ac8d 166 Gene3D G3DSA:2.30.30.220 3 128 3.3E-53 T 15-10-2018 IPR036760 SspB-like superfamily AM378_19935 1d08c5175d2e3f79e0e2132b8d842a8a 768 Gene3D G3DSA:2.60.120.260 61 191 9.8E-26 T 15-10-2018 IPR008979 Galactose-binding-like domain superfamily AM378_19935 1d08c5175d2e3f79e0e2132b8d842a8a 768 Pfam PF03170 Bacterial cellulose synthase subunit 60 668 5.4E-227 T 15-10-2018 IPR018513 Cellulose synthase BcsB, bacterial GO:0006011|GO:0016020 AM378_19935 1d08c5175d2e3f79e0e2132b8d842a8a 768 Gene3D G3DSA:2.60.120.260 350 509 2.9E-24 T 15-10-2018 IPR008979 Galactose-binding-like domain superfamily AM378_19935 1d08c5175d2e3f79e0e2132b8d842a8a 768 PRINTS PR01440 Cellulose synthase subunit B signature 384 405 1.8E-34 T 15-10-2018 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 AM378_19935 1d08c5175d2e3f79e0e2132b8d842a8a 768 PRINTS PR01440 Cellulose synthase subunit B signature 88 109 1.8E-34 T 15-10-2018 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 AM378_19935 1d08c5175d2e3f79e0e2132b8d842a8a 768 PRINTS PR01440 Cellulose synthase subunit B signature 178 199 1.8E-34 T 15-10-2018 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 AM378_19935 1d08c5175d2e3f79e0e2132b8d842a8a 768 PRINTS PR01440 Cellulose synthase subunit B signature 517 536 1.8E-34 T 15-10-2018 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 AM378_19935 1d08c5175d2e3f79e0e2132b8d842a8a 768 PRINTS PR01440 Cellulose synthase subunit B signature 220 243 1.8E-34 T 15-10-2018 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 AM378_19935 1d08c5175d2e3f79e0e2132b8d842a8a 768 PRINTS PR01440 Cellulose synthase subunit B signature 707 727 1.8E-34 T 15-10-2018 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 AM378_19935 1d08c5175d2e3f79e0e2132b8d842a8a 768 PRINTS PR01440 Cellulose synthase subunit B signature 301 322 1.8E-34 T 15-10-2018 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 AM378_19935 1d08c5175d2e3f79e0e2132b8d842a8a 768 PRINTS PR01440 Cellulose synthase subunit B signature 554 574 1.8E-34 T 15-10-2018 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 AM378_18020 5db75effe8774d804bffb78edab680f0 108 Gene3D G3DSA:3.40.250.10 1 108 1.3E-29 T 15-10-2018 IPR036873 Rhodanese-like domain superfamily AM378_18020 5db75effe8774d804bffb78edab680f0 108 SMART SM00450 7 102 6.3E-21 T 15-10-2018 IPR001763 Rhodanese-like domain AM378_18020 5db75effe8774d804bffb78edab680f0 108 Pfam PF00581 Rhodanese-like domain 11 98 2.8E-14 T 15-10-2018 IPR001763 Rhodanese-like domain AM378_18020 5db75effe8774d804bffb78edab680f0 108 Hamap MF_01009 Thiosulfate sulfurtransferase GlpE [glpE]. 2 105 32.5 T 15-10-2018 IPR023695 Thiosulfate sulfurtransferase, bacterial GO:0004792|GO:0005737 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350|MetaCyc: PWY-7927 AM378_18020 5db75effe8774d804bffb78edab680f0 108 SUPERFAMILY SSF52821 2 102 1.7E-28 T 15-10-2018 IPR036873 Rhodanese-like domain superfamily AM378_21755 f17307df7a721e6d072b2eb04a01481c 133 Pfam PF08845 Toxin SymE, type I toxin-antitoxin system 41 92 9.6E-16 T 15-10-2018 IPR014944 Toxin SymE-like GO:0003723|GO:0005737|GO:0016070|GO:0016788 AM378_21755 f17307df7a721e6d072b2eb04a01481c 133 Hamap MF_01193 Endoribonuclease SymE [symE]. 22 131 32.658 T 15-10-2018 IPR020883 Type I toxin-antitoxin system, SymE toxin GO:0003723|GO:0004521|GO:0005737|GO:0016070 AM378_23220 4b93f8ccc47a42f02a4b77e2973c5d97 253 Hamap MF_01246 Chitooligosaccharide deacetylase [chbG]. 3 250 41.305 T 15-10-2018 IPR022948 Chitooligosaccharide deacetylase ChbG-like, bacteria GO:0000272|GO:0016811 AM378_23220 4b93f8ccc47a42f02a4b77e2973c5d97 253 Gene3D G3DSA:3.20.20.370 1 253 1.0E-68 T 15-10-2018 AM378_23220 4b93f8ccc47a42f02a4b77e2973c5d97 253 Pfam PF04794 YdjC-like protein 5 241 2.3E-59 T 15-10-2018 IPR006879 Carbohydrate deacetylase YdjC-like AM378_23220 4b93f8ccc47a42f02a4b77e2973c5d97 253 SUPERFAMILY SSF88713 1 253 5.78E-74 T 15-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 AM378_10895 48e50b37c425375dba491071d3c15f7a 336 Gene3D G3DSA:1.10.3470.10 4 334 6.4E-95 T 15-10-2018 IPR037294 ABC transporter, BtuC-like AM378_10895 48e50b37c425375dba491071d3c15f7a 336 SUPERFAMILY SSF81345 6 327 7.72E-70 T 15-10-2018 IPR037294 ABC transporter, BtuC-like AM378_10895 48e50b37c425375dba491071d3c15f7a 336 Pfam PF01032 FecCD transport family 18 327 2.0E-82 T 15-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 AM378_10560 13e068349d18cddf3c8d958b4bdf13a4 268 Pfam PF01614 Bacterial transcriptional regulator 138 263 1.5E-30 T 15-10-2018 IPR014757 Transcription regulator IclR, C-terminal AM378_10560 13e068349d18cddf3c8d958b4bdf13a4 268 Gene3D G3DSA:1.10.10.10 8 89 2.0E-21 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_10560 13e068349d18cddf3c8d958b4bdf13a4 268 Pfam PF09339 IclR helix-turn-helix domain 24 72 5.2E-15 T 15-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 AM378_10560 13e068349d18cddf3c8d958b4bdf13a4 268 Gene3D G3DSA:3.30.450.40 90 267 8.6E-56 T 15-10-2018 IPR029016 GAF-like domain superfamily AM378_10560 13e068349d18cddf3c8d958b4bdf13a4 268 SUPERFAMILY SSF46785 23 93 1.02E-13 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM378_10560 13e068349d18cddf3c8d958b4bdf13a4 268 TIGRFAM TIGR02431 pcaR_pcaU: beta-ketoadipate pathway transcriptional regulators, PcaR/PcaU/PobR family 19 264 3.3E-93 T 15-10-2018 IPR012794 Beta-ketoadipate transcriptional regulator, PcaR/PcaU/PobR GO:0003677|GO:0045893|GO:0046278 AM378_10560 13e068349d18cddf3c8d958b4bdf13a4 268 SUPERFAMILY SSF55781 88 266 8.83E-50 T 15-10-2018 AM378_10560 13e068349d18cddf3c8d958b4bdf13a4 268 SMART SM00346 22 111 7.2E-24 T 15-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 AM378_20825 6c9a3c464ed2a511dc268d7fa9d9f120 68 SUPERFAMILY SSF160582 4 64 4.58E-21 T 15-10-2018 IPR038020 MbtH-like domain superfamily AM378_20825 6c9a3c464ed2a511dc268d7fa9d9f120 68 Pfam PF03621 MbtH-like protein 5 55 1.0E-19 T 15-10-2018 IPR005153 MbtH-like domain AM378_20825 6c9a3c464ed2a511dc268d7fa9d9f120 68 Gene3D G3DSA:3.90.820.10 1 68 6.5E-26 T 15-10-2018 AM378_20825 6c9a3c464ed2a511dc268d7fa9d9f120 68 SMART SM00923 5 55 1.2E-18 T 15-10-2018 IPR005153 MbtH-like domain AM378_09695 b18d5d942e008f1a0a725177e51363f7 366 PRINTS PR01010 Flagellar P-ring protein signature 22 37 8.2E-90 T 15-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 AM378_09695 b18d5d942e008f1a0a725177e51363f7 366 PRINTS PR01010 Flagellar P-ring protein signature 188 206 8.2E-90 T 15-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 AM378_09695 b18d5d942e008f1a0a725177e51363f7 366 PRINTS PR01010 Flagellar P-ring protein signature 162 180 8.2E-90 T 15-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 AM378_09695 b18d5d942e008f1a0a725177e51363f7 366 PRINTS PR01010 Flagellar P-ring protein signature 105 122 8.2E-90 T 15-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 AM378_09695 b18d5d942e008f1a0a725177e51363f7 366 PRINTS PR01010 Flagellar P-ring protein signature 252 264 8.2E-90 T 15-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 AM378_09695 b18d5d942e008f1a0a725177e51363f7 366 PRINTS PR01010 Flagellar P-ring protein signature 37 52 8.2E-90 T 15-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 AM378_09695 b18d5d942e008f1a0a725177e51363f7 366 PRINTS PR01010 Flagellar P-ring protein signature 57 72 8.2E-90 T 15-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 AM378_09695 b18d5d942e008f1a0a725177e51363f7 366 PRINTS PR01010 Flagellar P-ring protein signature 83 102 8.2E-90 T 15-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 AM378_09695 b18d5d942e008f1a0a725177e51363f7 366 PRINTS PR01010 Flagellar P-ring protein signature 122 140 8.2E-90 T 15-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 AM378_09695 b18d5d942e008f1a0a725177e51363f7 366 Hamap MF_00416 Flagellar P-ring protein [flgI]. 5 366 38.374 T 15-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 AM378_09695 b18d5d942e008f1a0a725177e51363f7 366 Pfam PF02119 Flagellar P-ring protein 22 365 1.8E-136 T 15-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 AM378_23990 4d73e605245ec06d1b1af0babeacf29e 231 SUPERFAMILY SSF81338 3 228 8.24E-69 T 15-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 AM378_23990 4d73e605245ec06d1b1af0babeacf29e 231 ProSitePatterns PS00221 MIP family signature. 61 69 - T 15-10-2018 IPR022357 Major intrinsic protein, conserved site Reactome: R-HSA-432047 AM378_23990 4d73e605245ec06d1b1af0babeacf29e 231 PRINTS PR00783 Major intrinsic protein family signature 3 22 5.0E-52 T 15-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 AM378_23990 4d73e605245ec06d1b1af0babeacf29e 231 PRINTS PR00783 Major intrinsic protein family signature 43 67 5.0E-52 T 15-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 AM378_23990 4d73e605245ec06d1b1af0babeacf29e 231 PRINTS PR00783 Major intrinsic protein family signature 137 155 5.0E-52 T 15-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 AM378_23990 4d73e605245ec06d1b1af0babeacf29e 231 PRINTS PR00783 Major intrinsic protein family signature 80 99 5.0E-52 T 15-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 AM378_23990 4d73e605245ec06d1b1af0babeacf29e 231 PRINTS PR00783 Major intrinsic protein family signature 167 189 5.0E-52 T 15-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 AM378_23990 4d73e605245ec06d1b1af0babeacf29e 231 PRINTS PR00783 Major intrinsic protein family signature 206 226 5.0E-52 T 15-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 AM378_23990 4d73e605245ec06d1b1af0babeacf29e 231 Pfam PF00230 Major intrinsic protein 3 223 5.4E-53 T 15-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 AM378_23990 4d73e605245ec06d1b1af0babeacf29e 231 TIGRFAM TIGR00861 MIP: MIP family channel proteins 7 223 1.4E-63 T 15-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 AM378_23990 4d73e605245ec06d1b1af0babeacf29e 231 Hamap MF_01146 Aquaporin Z [aqpZ]. 2 230 35.942 T 15-10-2018 IPR023743 Aquaporin Z GO:0006833|GO:0015250|GO:0016021|GO:0055085 AM378_23990 4d73e605245ec06d1b1af0babeacf29e 231 Gene3D G3DSA:1.20.1080.10 1 231 1.5E-91 T 15-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 AM378_14195 d0cc1fb05283aa445b9826715d7bf8ad 104 PRINTS PR00605 Class IC cytochrome C signature 77 99 2.1E-5 T 15-10-2018 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 AM378_14195 d0cc1fb05283aa445b9826715d7bf8ad 104 PRINTS PR00605 Class IC cytochrome C signature 32 43 2.1E-5 T 15-10-2018 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 AM378_14195 d0cc1fb05283aa445b9826715d7bf8ad 104 SUPERFAMILY SSF46626 7 103 7.74E-23 T 15-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM378_14195 d0cc1fb05283aa445b9826715d7bf8ad 104 Gene3D G3DSA:1.10.760.10 21 104 7.1E-28 T 15-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM378_14195 d0cc1fb05283aa445b9826715d7bf8ad 104 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 24 98 1.4E-8 T 15-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM378_05730 aa737eb49d9def3eac8bc0c62b8abae9 78 Pfam PF04728 Lipoprotein leucine-zipper 26 78 3.0E-25 T 15-10-2018 IPR006817 Lipoprotein leucine-zipper GO:0019867 AM378_05730 aa737eb49d9def3eac8bc0c62b8abae9 78 SUPERFAMILY SSF58042 24 73 7.72E-23 T 15-10-2018 AM378_05730 aa737eb49d9def3eac8bc0c62b8abae9 78 PIRSF PIRSF002855 1 78 1.4E-29 T 15-10-2018 IPR016367 Murein-lipoprotein AM378_05730 aa737eb49d9def3eac8bc0c62b8abae9 78 Gene3D G3DSA:1.20.5.190 22 77 1.8E-32 T 15-10-2018 AM378_00355 9df3261532864bcc7194479dbb97c555 311 Gene3D G3DSA:1.10.620.20 2 301 2.5E-59 T 15-10-2018 IPR012348 Ribonucleotide reductase-like GO:0016491|GO:0055114 Reactome: R-HSA-499943 AM378_00355 9df3261532864bcc7194479dbb97c555 311 Pfam PF11583 P-aminobenzoate N-oxygenase AurF 4 239 4.7E-22 T 15-10-2018 IPR025859 P-aminobenzoate N-oxygenase AurF AM378_02790 5f8475cc0d9188d146c15a01b676c4f3 464 Pfam PF02397 Bacterial sugar transferase 274 456 3.3E-66 T 15-10-2018 IPR003362 Bacterial sugar transferase AM378_02790 5f8475cc0d9188d146c15a01b676c4f3 464 Gene3D G3DSA:3.40.50.720 141 263 6.8E-13 T 15-10-2018 AM378_02790 5f8475cc0d9188d146c15a01b676c4f3 464 SUPERFAMILY SSF51735 142 270 9.84E-9 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily AM378_02790 5f8475cc0d9188d146c15a01b676c4f3 464 Pfam PF13727 CoA-binding domain 64 238 7.3E-30 T 15-10-2018 AM378_02790 5f8475cc0d9188d146c15a01b676c4f3 464 TIGRFAM TIGR03023 WcaJ_sugtrans: undecaprenyl-phosphate glucose phosphotransferase 23 464 8.0E-166 T 15-10-2018 IPR017473 Undecaprenyl-phosphate glucose phosphotransferase, WcaJ MetaCyc: PWY-6655|MetaCyc: PWY-6658 AM378_02790 5f8475cc0d9188d146c15a01b676c4f3 464 TIGRFAM TIGR03025 EPS_sugtrans: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase 23 464 2.0E-143 T 15-10-2018 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase AM378_13650 57ed6983d97c103bfde92a0977315bbc 251 Gene3D G3DSA:1.25.40.20 41 179 3.3E-26 T 15-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily AM378_13650 57ed6983d97c103bfde92a0977315bbc 251 Gene3D G3DSA:1.25.40.960 180 224 6.3E-6 T 15-10-2018 AM378_13650 57ed6983d97c103bfde92a0977315bbc 251 Pfam PF00023 Ankyrin repeat 176 206 0.0014 T 15-10-2018 IPR002110 Ankyrin repeat GO:0005515 AM378_13650 57ed6983d97c103bfde92a0977315bbc 251 SUPERFAMILY SSF48403 47 216 2.94E-35 T 15-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily AM378_13650 57ed6983d97c103bfde92a0977315bbc 251 SMART SM00248 142 171 1.1 T 15-10-2018 IPR002110 Ankyrin repeat GO:0005515 AM378_13650 57ed6983d97c103bfde92a0977315bbc 251 SMART SM00248 175 204 0.015 T 15-10-2018 IPR002110 Ankyrin repeat GO:0005515 AM378_13650 57ed6983d97c103bfde92a0977315bbc 251 SMART SM00248 108 137 0.031 T 15-10-2018 IPR002110 Ankyrin repeat GO:0005515 AM378_13650 57ed6983d97c103bfde92a0977315bbc 251 SMART SM00248 75 104 12.0 T 15-10-2018 IPR002110 Ankyrin repeat GO:0005515 AM378_13650 57ed6983d97c103bfde92a0977315bbc 251 Pfam PF12796 Ankyrin repeats (3 copies) 80 173 5.2E-11 T 15-10-2018 IPR020683 Ankyrin repeat-containing domain AM378_24100 a415ac911a72e2484a51df02bc3fea7d 225 Pfam PF07302 AroM protein 6 224 4.5E-81 T 15-10-2018 IPR010843 Uncharacterised protein family AroM AM378_24100 a415ac911a72e2484a51df02bc3fea7d 225 ProDom PD037589 AROM ARO OPERON REGULATED BY AROR BIOSYNTHESIS TRANSCRIPTION AMINO AROMATIC 5 223 1.0E-37 T 15-10-2018 IPR010843 Uncharacterised protein family AroM AM378_24100 a415ac911a72e2484a51df02bc3fea7d 225 Gene3D G3DSA:3.40.50.12500 124 225 1.0E-6 T 15-10-2018 AM378_11920 1cb52501582159c4c87cdcf0acc7b61a 234 SUPERFAMILY SSF161098 17 220 3.92E-37 T 15-10-2018 IPR035906 MetI-like superfamily AM378_11920 1cb52501582159c4c87cdcf0acc7b61a 234 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 21 122 4.4E-14 T 15-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 AM378_11920 1cb52501582159c4c87cdcf0acc7b61a 234 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 38 221 1.6E-15 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AM378_11920 1cb52501582159c4c87cdcf0acc7b61a 234 Gene3D G3DSA:1.10.3720.10 8 230 4.4E-43 T 15-10-2018 IPR035906 MetI-like superfamily AM378_11075 cb7a58d486bf62f11e261c1425e9a30b 304 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 3 153 5.4E-4 T 15-10-2018 AM378_11075 cb7a58d486bf62f11e261c1425e9a30b 304 Pfam PF01370 NAD dependent epimerase/dehydratase family 6 207 1.0E-25 T 15-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 AM378_11075 cb7a58d486bf62f11e261c1425e9a30b 304 Gene3D G3DSA:3.40.50.720 1 303 2.3E-54 T 15-10-2018 AM378_11075 cb7a58d486bf62f11e261c1425e9a30b 304 SUPERFAMILY SSF51735 2 301 4.47E-56 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily AM378_17690 a3ad1580f9d531d2c2430897e06b5dd8 135 SUPERFAMILY SSF82784 1 131 3.8E-42 T 15-10-2018 IPR036102 OsmC/Ohr superfamily AM378_17690 a3ad1580f9d531d2c2430897e06b5dd8 135 Pfam PF02566 OsmC-like protein 30 127 1.9E-18 T 15-10-2018 IPR003718 OsmC/Ohr family AM378_17690 a3ad1580f9d531d2c2430897e06b5dd8 135 Gene3D G3DSA:2.20.25.10 1 34 1.6E-21 T 15-10-2018 AM378_17690 a3ad1580f9d531d2c2430897e06b5dd8 135 Gene3D G3DSA:3.30.300.20 35 132 2.9E-31 T 15-10-2018 IPR015946 K homology domain-like, alpha/beta AM378_05635 b220967c8a68ab8ee3e03b7639e4e893 693 Pfam PF07715 TonB-dependent Receptor Plug Domain 65 167 1.5E-23 T 15-10-2018 IPR012910 TonB-dependent receptor, plug domain AM378_05635 b220967c8a68ab8ee3e03b7639e4e893 693 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 57 - T 15-10-2018 IPR010916 TonB box, conserved site AM378_05635 b220967c8a68ab8ee3e03b7639e4e893 693 Gene3D G3DSA:2.170.130.10 49 172 9.4E-42 T 15-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily AM378_05635 b220967c8a68ab8ee3e03b7639e4e893 693 TIGRFAM TIGR01785 TonB-hemin: TonB-dependent heme/hemoglobin receptor family protein 50 693 5.0E-181 T 15-10-2018 IPR011276 TonB-dependent haem/haemoglobin receptor GO:0015232|GO:0015886|GO:0019867 AM378_05635 b220967c8a68ab8ee3e03b7639e4e893 693 SUPERFAMILY SSF56935 50 693 2.33E-106 T 15-10-2018 AM378_05635 b220967c8a68ab8ee3e03b7639e4e893 693 Gene3D G3DSA:2.40.170.20 173 693 5.2E-135 T 15-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AM378_05635 b220967c8a68ab8ee3e03b7639e4e893 693 TIGRFAM TIGR01786 TonB-hemlactrns: TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein 51 693 5.9E-143 T 15-10-2018 IPR010949 TonB-dependent haemoglobin/transferrin/lactoferrin receptor GO:0019867|GO:0022857|GO:0055085 AM378_05635 b220967c8a68ab8ee3e03b7639e4e893 693 Pfam PF00593 TonB dependent receptor 286 691 7.2E-48 T 15-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel AM378_13670 cc58c50414ac25c1ecc489dd1a59967c 194 PRINTS PR00773 GrpE protein signature 60 76 1.2E-26 T 15-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 AM378_13670 cc58c50414ac25c1ecc489dd1a59967c 194 PRINTS PR00773 GrpE protein signature 88 103 1.2E-26 T 15-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 AM378_13670 cc58c50414ac25c1ecc489dd1a59967c 194 PRINTS PR00773 GrpE protein signature 170 189 1.2E-26 T 15-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 AM378_13670 cc58c50414ac25c1ecc489dd1a59967c 194 PRINTS PR00773 GrpE protein signature 143 158 1.2E-26 T 15-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 AM378_13670 cc58c50414ac25c1ecc489dd1a59967c 194 Pfam PF01025 GrpE 34 191 1.3E-48 T 15-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 AM378_13670 cc58c50414ac25c1ecc489dd1a59967c 194 Gene3D G3DSA:2.30.22.10 135 191 6.4E-26 T 15-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 AM378_13670 cc58c50414ac25c1ecc489dd1a59967c 194 SUPERFAMILY SSF51064 136 192 5.36E-19 T 15-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 AM378_13670 cc58c50414ac25c1ecc489dd1a59967c 194 ProSitePatterns PS01071 grpE protein signature. 146 189 - T 15-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 AM378_13670 cc58c50414ac25c1ecc489dd1a59967c 194 Gene3D G3DSA:3.90.20.20 31 134 1.1E-36 T 15-10-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 AM378_13670 cc58c50414ac25c1ecc489dd1a59967c 194 Hamap MF_01151 Protein GrpE [grpE]. 4 191 21.309 T 15-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 AM378_13670 cc58c50414ac25c1ecc489dd1a59967c 194 SUPERFAMILY SSF58014 43 135 1.57E-26 T 15-10-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 AM378_02860 7d8ea3f76a6cf3aef6e241ae3ba10f89 654 SUPERFAMILY SSF56784 8 234 1.67E-16 T 15-10-2018 IPR036412 HAD-like superfamily AM378_02860 7d8ea3f76a6cf3aef6e241ae3ba10f89 654 Gene3D G3DSA:3.40.50.1000 8 236 1.6E-14 T 15-10-2018 IPR023214 HAD superfamily AM378_07320 b3b15d8ed5e48a9f437aee8ac1f3257f 539 Gene3D G3DSA:3.40.190.10 40 521 4.0E-170 T 15-10-2018 AM378_07320 b3b15d8ed5e48a9f437aee8ac1f3257f 539 SUPERFAMILY SSF53850 38 536 5.74E-130 T 15-10-2018 AM378_07320 b3b15d8ed5e48a9f437aee8ac1f3257f 539 PIRSF PIRSF002741 3 539 1.8E-107 T 15-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 AM378_07320 b3b15d8ed5e48a9f437aee8ac1f3257f 539 Gene3D G3DSA:3.90.76.10 70 192 4.0E-170 T 15-10-2018 AM378_07320 b3b15d8ed5e48a9f437aee8ac1f3257f 539 Gene3D G3DSA:3.10.105.10 294 509 4.0E-170 T 15-10-2018 AM378_07320 b3b15d8ed5e48a9f437aee8ac1f3257f 539 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 81 459 5.9E-80 T 15-10-2018 IPR000914 Solute-binding protein family 5 domain AM378_03625 edb51e5c3168e829d5edcc249d900b27 382 Gene3D G3DSA:3.20.20.30 1 361 1.2E-155 T 15-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 AM378_03625 edb51e5c3168e829d5edcc249d900b27 382 Pfam PF00296 Luciferase-like monooxygenase 4 325 1.8E-85 T 15-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 AM378_03625 edb51e5c3168e829d5edcc249d900b27 382 SUPERFAMILY SSF51679 3 349 4.58E-98 T 15-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 AM378_03625 edb51e5c3168e829d5edcc249d900b27 382 Hamap MF_01229 Alkanesulfonate monooxygenase [ssuD]. 3 379 79.383 T 15-10-2018 IPR019911 Alkanesulphonate monooxygenase, FMN-dependent GO:0008726|GO:0055114 KEGG: 00920+1.14.14.5 AM378_03625 edb51e5c3168e829d5edcc249d900b27 382 TIGRFAM TIGR03565 alk_sulf_monoox: alkanesulfonate monooxygenase, FMNH(2)-dependent 4 349 2.6E-191 T 15-10-2018 IPR019911 Alkanesulphonate monooxygenase, FMN-dependent GO:0008726|GO:0055114 KEGG: 00920+1.14.14.5 AM378_07835 616b3e08200e64a1046c92041d7e4184 284 Pfam PF03466 LysR substrate binding domain 85 280 5.0E-38 T 15-10-2018 IPR005119 LysR, substrate-binding AM378_07835 616b3e08200e64a1046c92041d7e4184 284 SUPERFAMILY SSF46785 1 84 9.8E-17 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM378_07835 616b3e08200e64a1046c92041d7e4184 284 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 6.9E-13 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_07835 616b3e08200e64a1046c92041d7e4184 284 Gene3D G3DSA:3.40.190.290 89 282 2.9E-28 T 15-10-2018 AM378_07835 616b3e08200e64a1046c92041d7e4184 284 SUPERFAMILY SSF53850 84 275 7.19E-33 T 15-10-2018 AM378_07835 616b3e08200e64a1046c92041d7e4184 284 Gene3D G3DSA:1.10.10.10 1 88 1.1E-18 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_22480 2c85454d981c77d6bd66a8270d1d2e4f 258 Pfam PF03883 Peroxide stress protein YaaA 1 243 8.1E-92 T 15-10-2018 IPR005583 Peroxide stress protein YaaA AM378_22480 2c85454d981c77d6bd66a8270d1d2e4f 258 Hamap MF_00652 UPF0246 protein YaaA [yaaA]. 1 255 38.1 T 15-10-2018 IPR005583 Peroxide stress protein YaaA AM378_03440 e9eecb9b3fb335d9f49f2bf36f230a6a 383 Pfam PF07690 Major Facilitator Superfamily 11 317 7.4E-25 T 15-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM378_03440 e9eecb9b3fb335d9f49f2bf36f230a6a 383 Gene3D G3DSA:1.20.1250.20 195 378 4.5E-21 T 15-10-2018 AM378_03440 e9eecb9b3fb335d9f49f2bf36f230a6a 383 Hamap MF_01149 Uncharacterized MFS-type transporter YcaD [ycaD]. 1 383 35.885 T 15-10-2018 IPR023745 MSF-type transporter, YcaD AM378_03440 e9eecb9b3fb335d9f49f2bf36f230a6a 383 Gene3D G3DSA:1.20.1250.20 3 191 4.1E-22 T 15-10-2018 AM378_03440 e9eecb9b3fb335d9f49f2bf36f230a6a 383 SUPERFAMILY SSF103473 6 371 2.09E-45 T 15-10-2018 IPR036259 MFS transporter superfamily AM378_08995 ff286f1be0d79f90dc7a3ed915cd997d 63 Pfam PF07358 Protein of unknown function (DUF1482) 1 57 5.2E-30 T 15-10-2018 IPR009954 Protein of unknown function DUF1482 AM378_23570 ab4aedee73f1fb502a70d2dea948beb8 209 TIGRFAM TIGR01939 nqrD: NADH:ubiquinone oxidoreductase, Na(+)-translocating, D subunit 4 206 1.4E-104 T 15-10-2018 IPR011292 Na(+)-translocating NADH-quinone reductase subunit D GO:0016655|GO:0055114 AM378_23570 ab4aedee73f1fb502a70d2dea948beb8 209 Hamap MF_00428 Na(+)-translocating NADH-quinone reductase subunit D [nqrD]. 2 207 36.687 T 15-10-2018 IPR011292 Na(+)-translocating NADH-quinone reductase subunit D GO:0016655|GO:0055114 AM378_23570 ab4aedee73f1fb502a70d2dea948beb8 209 Pfam PF02508 Rnf-Nqr subunit, membrane protein 9 195 6.9E-62 T 15-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 AM378_23570 ab4aedee73f1fb502a70d2dea948beb8 209 PIRSF PIRSF006102 3 209 1.3E-71 T 15-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 AM378_16600 b423b92f2e66669bb6e755fc1abf5f9a 100 SUPERFAMILY SSF52091 1 96 9.61E-16 T 15-10-2018 IPR036513 STAS domain superfamily AM378_16600 b423b92f2e66669bb6e755fc1abf5f9a 100 Pfam PF13466 STAS domain 16 91 2.5E-17 T 15-10-2018 IPR002645 STAS domain AM378_16600 b423b92f2e66669bb6e755fc1abf5f9a 100 Gene3D G3DSA:3.30.750.24 7 99 2.8E-12 T 15-10-2018 IPR036513 STAS domain superfamily AM378_22605 197877957678fa90c340fd0187961666 617 Pfam PF02254 TrkA-N domain 403 513 7.2E-25 T 15-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 AM378_22605 197877957678fa90c340fd0187961666 617 Hamap MF_01413 Glutathione-regulated potassium-efflux system protein KefC [kefC]. 1 608 55.252 T 15-10-2018 IPR023941 Glutathione-regulated potassium-efflux system protein KefC GO:0005887|GO:0006813|GO:0015503|GO:0015643|GO:0019899|GO:0051595 AM378_22605 197877957678fa90c340fd0187961666 617 SUPERFAMILY SSF51735 402 530 1.78E-33 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily AM378_22605 197877957678fa90c340fd0187961666 617 Gene3D G3DSA:1.20.1530.20 3 388 6.3E-81 T 15-10-2018 IPR038770 Sodium/solute symporter superfamily AM378_22605 197877957678fa90c340fd0187961666 617 Pfam PF00999 Sodium/hydrogen exchanger family 12 375 4.3E-63 T 15-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 AM378_22605 197877957678fa90c340fd0187961666 617 Gene3D G3DSA:3.40.50.720 399 561 3.2E-41 T 15-10-2018 AM378_22605 197877957678fa90c340fd0187961666 617 TIGRFAM TIGR00932 2a37: transporter, monovalent cation:proton antiporter-2 (CPA2) family 15 286 7.3E-89 T 15-10-2018 IPR004771 K+/H+ exchanger GO:0006812|GO:0008324|GO:0016021 AM378_05765 d646c2e46a5dd1e711cf50647b2d9941 216 Pfam PF00677 Lumazine binding domain 3 87 2.2E-20 T 15-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AM378_05765 d646c2e46a5dd1e711cf50647b2d9941 216 Pfam PF00677 Lumazine binding domain 100 185 3.4E-22 T 15-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AM378_05765 d646c2e46a5dd1e711cf50647b2d9941 216 SUPERFAMILY SSF63380 93 200 4.76E-32 T 15-10-2018 IPR017938 Riboflavin synthase-like beta-barrel AM378_05765 d646c2e46a5dd1e711cf50647b2d9941 216 Gene3D G3DSA:2.40.30.20 1 89 2.0E-31 T 15-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 AM378_05765 d646c2e46a5dd1e711cf50647b2d9941 216 PIRSF PIRSF000498 1 211 7.9E-73 T 15-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AM378_05765 d646c2e46a5dd1e711cf50647b2d9941 216 Gene3D G3DSA:2.40.30.20 94 191 1.8E-29 T 15-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 AM378_05765 d646c2e46a5dd1e711cf50647b2d9941 216 SUPERFAMILY SSF63380 1 93 3.23E-27 T 15-10-2018 IPR017938 Riboflavin synthase-like beta-barrel AM378_05765 d646c2e46a5dd1e711cf50647b2d9941 216 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 1 203 3.1E-82 T 15-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AM378_03755 202fc18e0012f669fb7e84af62649377 105 SMART SM00992 3 102 8.2E-40 T 15-10-2018 IPR011722 Hemimethylated DNA-binding domain GO:0003677 AM378_03755 202fc18e0012f669fb7e84af62649377 105 TIGRFAM TIGR02097 yccV: hemimethylated DNA binding domain 4 102 6.2E-35 T 15-10-2018 IPR011722 Hemimethylated DNA-binding domain GO:0003677 AM378_03755 202fc18e0012f669fb7e84af62649377 105 Pfam PF08755 Hemimethylated DNA-binding protein YccV like 5 96 4.5E-21 T 15-10-2018 IPR011722 Hemimethylated DNA-binding domain GO:0003677 AM378_03755 202fc18e0012f669fb7e84af62649377 105 Gene3D G3DSA:2.30.30.390 1 105 1.1E-41 T 15-10-2018 IPR036623 Hemimethylated DNA-binding domain superfamily GO:0003677 AM378_03755 202fc18e0012f669fb7e84af62649377 105 SUPERFAMILY SSF141255 4 96 2.62E-30 T 15-10-2018 IPR036623 Hemimethylated DNA-binding domain superfamily GO:0003677 AM378_03755 202fc18e0012f669fb7e84af62649377 105 Hamap MF_01194 Heat shock protein HspQ [hspQ]. 1 105 39.043 T 15-10-2018 IPR022866 Heat shock protein HspQ AM378_02425 507376df12e28c1c7d3bf0662bad3020 541 PIRSF PIRSF006429 5 541 1.6E-162 T 15-10-2018 IPR024188 Glutamate synthase large subunit-like protein AM378_02425 507376df12e28c1c7d3bf0662bad3020 541 Gene3D G3DSA:3.20.20.70 140 504 1.9E-108 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM378_02425 507376df12e28c1c7d3bf0662bad3020 541 SUPERFAMILY SSF51395 7 503 4.08E-137 T 15-10-2018 AM378_02425 507376df12e28c1c7d3bf0662bad3020 541 Pfam PF01645 Conserved region in glutamate synthase 158 475 2.0E-83 T 15-10-2018 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 AM378_02425 507376df12e28c1c7d3bf0662bad3020 541 PIRSF PIRSF500060 12 532 1.9E-233 T 15-10-2018 IPR027283 Glutamate synthase large subunit-like protein, bacteria AM378_20670 796eeca06366bed4a00cf1f4774f004d 259 Hamap MF_00443 Thiazole synthase [thiG]. 1 253 43.049 T 15-10-2018 IPR008867 Thiazole synthase GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 AM378_20670 796eeca06366bed4a00cf1f4774f004d 259 SUPERFAMILY SSF110399 1 235 8.11E-85 T 15-10-2018 AM378_20670 796eeca06366bed4a00cf1f4774f004d 259 Pfam PF05690 Thiazole biosynthesis protein ThiG 3 247 5.2E-108 T 15-10-2018 IPR033983 Thiazole synthase ThiG KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 AM378_20670 796eeca06366bed4a00cf1f4774f004d 259 Gene3D G3DSA:3.20.20.70 1 253 5.6E-109 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM378_19525 447651a28f759d132fa0a732798fa3d3 250 SUPERFAMILY SSF51658 3 248 1.27E-63 T 15-10-2018 IPR036237 Xylose isomerase-like superfamily AM378_19525 447651a28f759d132fa0a732798fa3d3 250 Gene3D G3DSA:3.20.20.150 1 250 2.6E-68 T 15-10-2018 AM378_15085 6da67ef94304e83622d28853a388487f 205 Pfam PF01810 LysE type translocator 14 201 1.2E-52 T 15-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AM378_15085 6da67ef94304e83622d28853a388487f 205 TIGRFAM TIGR00948 2a75: L-lysine exporter 15 191 4.0E-68 T 15-10-2018 IPR004777 L-lysine exporter/arginine exporter GO:0016021 AM378_15085 6da67ef94304e83622d28853a388487f 205 Hamap MF_01901 Arginine exporter protein ArgO [argO]. 1 205 38.854 T 15-10-2018 IPR023445 Arginine exporter protein ArgO, enterobacteria GO:0015181|GO:0015809 AM378_22265 32d60ae4e94c65d7d0ce7211d9742960 314 SUPERFAMILY SSF46785 5 112 4.47E-21 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM378_22265 32d60ae4e94c65d7d0ce7211d9742960 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 2.7E-5 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_22265 32d60ae4e94c65d7d0ce7211d9742960 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 2.7E-5 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_22265 32d60ae4e94c65d7d0ce7211d9742960 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 2.7E-5 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_22265 32d60ae4e94c65d7d0ce7211d9742960 314 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 62 7.3E-19 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_22265 32d60ae4e94c65d7d0ce7211d9742960 314 Pfam PF03466 LysR substrate binding domain 89 290 1.1E-40 T 15-10-2018 IPR005119 LysR, substrate-binding AM378_22265 32d60ae4e94c65d7d0ce7211d9742960 314 SUPERFAMILY SSF53850 89 296 1.7E-42 T 15-10-2018 AM378_22265 32d60ae4e94c65d7d0ce7211d9742960 314 Gene3D G3DSA:1.10.10.10 3 87 3.5E-26 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_22265 32d60ae4e94c65d7d0ce7211d9742960 314 Gene3D G3DSA:3.40.190.290 91 293 2.8E-59 T 15-10-2018 AM378_04710 28290b372ed063af582246ff8c1eb07a 500 Gene3D G3DSA:1.20.1740.10 12 469 5.2E-10 T 15-10-2018 AM378_04710 28290b372ed063af582246ff8c1eb07a 500 Pfam PF13520 Amino acid permease 10 433 1.5E-26 T 15-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 AM378_04710 28290b372ed063af582246ff8c1eb07a 500 PIRSF PIRSF006060 1 474 3.8E-46 T 15-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 AM378_13855 38f76dde9d5ccc90628e005771c66dcb 244 SUPERFAMILY SSF53335 5 234 1.88E-42 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM378_13855 38f76dde9d5ccc90628e005771c66dcb 244 Gene3D G3DSA:3.40.50.150 24 242 2.4E-69 T 15-10-2018 AM378_13855 38f76dde9d5ccc90628e005771c66dcb 244 Pfam PF08241 Methyltransferase domain 47 141 5.6E-22 T 15-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 AM378_00670 d76563b19cc0808c18f45320b1d5da91 357 SUPERFAMILY SSF50685 77 164 1.94E-7 T 15-10-2018 IPR036908 RlpA-like domain superfamily AM378_00670 d76563b19cc0808c18f45320b1d5da91 357 Gene3D G3DSA:3.30.70.1070 284 355 4.1E-13 T 15-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 AM378_00670 d76563b19cc0808c18f45320b1d5da91 357 Hamap MF_02071 Endolytic peptidoglycan transglycosylase RlpA [rlpA]. 16 165 22.892 T 15-10-2018 IPR034718 Endolytic peptidoglycan transglycosylase RlpA GO:0016829 AM378_00670 d76563b19cc0808c18f45320b1d5da91 357 SUPERFAMILY SSF110997 282 353 7.32E-16 T 15-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 AM378_00670 d76563b19cc0808c18f45320b1d5da91 357 Pfam PF05036 Sporulation related domain 282 354 1.0E-16 T 15-10-2018 IPR007730 Sporulation-like domain GO:0042834 AM378_00670 d76563b19cc0808c18f45320b1d5da91 357 Gene3D G3DSA:2.40.40.10 74 166 8.0E-34 T 15-10-2018 IPR036908 RlpA-like domain superfamily AM378_00670 d76563b19cc0808c18f45320b1d5da91 357 TIGRFAM TIGR00413 rlpA: rare lipoprotein A 77 175 7.3E-36 T 15-10-2018 IPR012997 Rare lipoprotein A AM378_00670 d76563b19cc0808c18f45320b1d5da91 357 Pfam PF03330 Lytic transglycolase 75 163 4.7E-24 T 15-10-2018 IPR009009 RlpA-like protein, double-psi beta-barrel domain AM378_14545 c35968000afccd860f6b968f52bdad2a 718 ProSitePatterns PS00455 Putative AMP-binding domain signature. 370 381 - T 15-10-2018 IPR020845 AMP-binding, conserved site AM378_14545 c35968000afccd860f6b968f52bdad2a 718 Pfam PF01553 Acyltransferase 16 137 7.6E-15 T 15-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 AM378_14545 c35968000afccd860f6b968f52bdad2a 718 SUPERFAMILY SSF69593 6 171 3.01E-21 T 15-10-2018 AM378_14545 c35968000afccd860f6b968f52bdad2a 718 Gene3D G3DSA:3.40.50.12780 192 614 1.0E-76 T 15-10-2018 AM378_14545 c35968000afccd860f6b968f52bdad2a 718 SUPERFAMILY SSF56801 191 713 3.92E-94 T 15-10-2018 AM378_14545 c35968000afccd860f6b968f52bdad2a 718 Gene3D G3DSA:3.30.300.30 616 716 4.5E-6 T 15-10-2018 AM378_14545 c35968000afccd860f6b968f52bdad2a 718 Pfam PF00501 AMP-binding enzyme 232 619 4.0E-65 T 15-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 AM378_14545 c35968000afccd860f6b968f52bdad2a 718 SMART SM00563 30 140 3.3E-25 T 15-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 AM378_14545 c35968000afccd860f6b968f52bdad2a 718 Hamap MF_01162 Bifunctional protein Aas [aas]. 1 717 53.138 T 15-10-2018 IPR023775 Bifunctional protein Aas GO:0006631|GO:0008654|GO:0008779|GO:0008922 KEGG: 00071+6.2.1.20|KEGG: 00564+2.3.1.40|MetaCyc: PWY-6622|MetaCyc: PWY-7032 AM378_14050 279cbcba6a8148ccaf408843a4dfb085 115 Pfam PF05437 Branched-chain amino acid transport protein (AzlD) 5 105 1.0E-14 T 15-10-2018 IPR008407 Branched-chain amino acid transport, AzlD AM378_05410 83512d28cc6e34566ecaab0e1571a390 182 Pfam PF04307 LexA-binding, inner membrane-associated putative hydrolase 1 161 1.3E-35 T 15-10-2018 IPR007404 LexA-binding, inner membrane-associated putative hydrolase AM378_05410 83512d28cc6e34566ecaab0e1571a390 182 PIRSF PIRSF030780 1 181 2.0E-95 T 15-10-2018 IPR016956 Inner membrane protein YdjM AM378_00125 18dd221a133f11310ed5ebb48dbf90c4 156 PRINTS PR00885 Bacterial general secretion pathway protein H signature 17 31 5.0E-10 T 15-10-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 AM378_00125 18dd221a133f11310ed5ebb48dbf90c4 156 PRINTS PR00885 Bacterial general secretion pathway protein H signature 2 16 5.0E-10 T 15-10-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 AM378_00125 18dd221a133f11310ed5ebb48dbf90c4 156 Gene3D G3DSA:3.55.40.10 34 150 3.7E-9 T 15-10-2018 AM378_00125 18dd221a133f11310ed5ebb48dbf90c4 156 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 5 26 8.0E-5 T 15-10-2018 IPR012902 Prokaryotic N-terminal methylation site AM378_00125 18dd221a133f11310ed5ebb48dbf90c4 156 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 5 25 - T 15-10-2018 IPR012902 Prokaryotic N-terminal methylation site AM378_00125 18dd221a133f11310ed5ebb48dbf90c4 156 Pfam PF07963 Prokaryotic N-terminal methylation motif 1 26 2.3E-5 T 15-10-2018 IPR012902 Prokaryotic N-terminal methylation site AM378_00125 18dd221a133f11310ed5ebb48dbf90c4 156 SUPERFAMILY SSF54523 7 93 1.49E-6 T 15-10-2018 AM378_12645 184cf2fa2c49fc9b023f4c1daf6d423c 195 ProDom PD105195 LIPOPROTEIN YFEY MEMBRANE OUTER PRECURSOR SIGNAL ESCHERICHIA ECS3303 EXPORTED Y1456 16 189 8.0E-53 T 15-10-2018 IPR010938 Protein of unknown function DUF1131 AM378_12645 184cf2fa2c49fc9b023f4c1daf6d423c 195 Pfam PF06572 Protein of unknown function (DUF1131) 22 190 1.7E-78 T 15-10-2018 IPR010938 Protein of unknown function DUF1131 AM378_12645 184cf2fa2c49fc9b023f4c1daf6d423c 195 Gene3D G3DSA:2.60.460.10 26 191 4.9E-66 T 15-10-2018 IPR038714 YfeY-like superfamily AM378_12945 c0430ac96ee7a3295e02c27ada180b12 345 TIGRFAM TIGR00878 purM: phosphoribosylformylglycinamidine cyclo-ligase 7 335 2.9E-153 T 15-10-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AM378_12945 c0430ac96ee7a3295e02c27ada180b12 345 Hamap MF_00741 Phosphoribosylformylglycinamidine cyclo-ligase [purM]. 7 344 47.235 T 15-10-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AM378_12945 c0430ac96ee7a3295e02c27ada180b12 345 SUPERFAMILY SSF56042 171 342 1.15E-63 T 15-10-2018 IPR036676 PurM-like, C-terminal domain superfamily AM378_12945 c0430ac96ee7a3295e02c27ada180b12 345 Gene3D G3DSA:3.90.650.10 171 345 1.1E-72 T 15-10-2018 IPR036676 PurM-like, C-terminal domain superfamily AM378_12945 c0430ac96ee7a3295e02c27ada180b12 345 Pfam PF00586 AIR synthase related protein, N-terminal domain 59 164 4.6E-16 T 15-10-2018 IPR016188 PurM-like, N-terminal domain AM378_12945 c0430ac96ee7a3295e02c27ada180b12 345 Gene3D G3DSA:3.30.1330.10 6 170 5.0E-69 T 15-10-2018 IPR036921 PurM-like, N-terminal domain superfamily AM378_12945 c0430ac96ee7a3295e02c27ada180b12 345 SUPERFAMILY SSF55326 7 170 2.09E-53 T 15-10-2018 IPR036921 PurM-like, N-terminal domain superfamily AM378_12945 c0430ac96ee7a3295e02c27ada180b12 345 Pfam PF02769 AIR synthase related protein, C-terminal domain 176 340 2.9E-39 T 15-10-2018 IPR010918 PurM-like, C-terminal domain AM378_08805 4544071dd17bd3b91091918538e2e7d8 187 Pfam PF07273 Protein of unknown function (DUF1439) 29 179 2.6E-58 T 15-10-2018 IPR010835 Protein of unknown function DUF1439 AM378_08805 4544071dd17bd3b91091918538e2e7d8 187 Gene3D G3DSA:3.15.10.40 17 187 1.1E-71 T 15-10-2018 AM378_00865 26733bd519108a2a05455748992708fd 108 Pfam PF13982 YbfN-like lipoprotein 21 107 6.8E-47 T 15-10-2018 IPR025727 YbfN-like lipoprotein AM378_21950 6ad06a641652be2b8904f55a67114834 273 Pfam PF12833 Helix-turn-helix domain 181 258 3.2E-21 T 15-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM378_21950 6ad06a641652be2b8904f55a67114834 273 SMART SM00342 175 257 7.1E-20 T 15-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM378_21950 6ad06a641652be2b8904f55a67114834 273 SUPERFAMILY SSF51182 18 187 1.07E-15 T 15-10-2018 IPR011051 RmlC-like cupin domain superfamily AM378_21950 6ad06a641652be2b8904f55a67114834 273 Gene3D G3DSA:2.60.120.10 10 92 1.1E-7 T 15-10-2018 IPR014710 RmlC-like jelly roll fold AM378_21950 6ad06a641652be2b8904f55a67114834 273 SUPERFAMILY SSF46689 214 258 1.43E-6 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AM378_21950 6ad06a641652be2b8904f55a67114834 273 Pfam PF02311 AraC-like ligand binding domain 29 82 1.2E-6 T 15-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 AM378_21950 6ad06a641652be2b8904f55a67114834 273 Gene3D G3DSA:1.10.10.60 156 265 1.5E-19 T 15-10-2018 AM378_13790 2c23809b6ced8985fbe33e39125136bd 294 SUPERFAMILY SSF56601 35 290 2.94E-78 T 15-10-2018 IPR012338 Beta-lactamase/transpeptidase-like AM378_13790 2c23809b6ced8985fbe33e39125136bd 294 PRINTS PR00118 Beta-lactamase class A signature 109 134 2.6E-72 T 15-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 AM378_13790 2c23809b6ced8985fbe33e39125136bd 294 PRINTS PR00118 Beta-lactamase class A signature 172 197 2.6E-72 T 15-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 AM378_13790 2c23809b6ced8985fbe33e39125136bd 294 PRINTS PR00118 Beta-lactamase class A signature 146 170 2.6E-72 T 15-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 AM378_13790 2c23809b6ced8985fbe33e39125136bd 294 PRINTS PR00118 Beta-lactamase class A signature 36 60 2.6E-72 T 15-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 AM378_13790 2c23809b6ced8985fbe33e39125136bd 294 PRINTS PR00118 Beta-lactamase class A signature 225 240 2.6E-72 T 15-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 AM378_13790 2c23809b6ced8985fbe33e39125136bd 294 PRINTS PR00118 Beta-lactamase class A signature 208 223 2.6E-72 T 15-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 AM378_13790 2c23809b6ced8985fbe33e39125136bd 294 PRINTS PR00118 Beta-lactamase class A signature 67 84 2.6E-72 T 15-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 AM378_13790 2c23809b6ced8985fbe33e39125136bd 294 Gene3D G3DSA:3.40.710.10 27 294 1.7E-82 T 15-10-2018 AM378_13790 2c23809b6ced8985fbe33e39125136bd 294 Pfam PF13354 Beta-lactamase enzyme family 57 265 1.2E-43 T 15-10-2018 AM378_21650 1fd40c1ada1b854269efed5d915f984b 167 SUPERFAMILY SSF55729 9 167 1.11E-31 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase AM378_21650 1fd40c1ada1b854269efed5d915f984b 167 Gene3D G3DSA:3.40.630.30 4 167 1.9E-26 T 15-10-2018 AM378_21650 1fd40c1ada1b854269efed5d915f984b 167 Pfam PF00583 Acetyltransferase (GNAT) family 43 144 7.6E-14 T 15-10-2018 IPR000182 GNAT domain AM378_15250 99b2b3e4be9bb18ef1604471c832fc12 264 Gene3D G3DSA:3.40.50.720 1 263 8.0E-70 T 15-10-2018 AM378_15250 99b2b3e4be9bb18ef1604471c832fc12 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 85 96 7.4E-27 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_15250 99b2b3e4be9bb18ef1604471c832fc12 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 179 196 7.4E-27 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_15250 99b2b3e4be9bb18ef1604471c832fc12 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 224 244 7.4E-27 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_15250 99b2b3e4be9bb18ef1604471c832fc12 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 158 177 7.4E-27 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_15250 99b2b3e4be9bb18ef1604471c832fc12 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 7.4E-27 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_15250 99b2b3e4be9bb18ef1604471c832fc12 264 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 16 261 2.4E-44 T 15-10-2018 AM378_15250 99b2b3e4be9bb18ef1604471c832fc12 264 SUPERFAMILY SSF51735 1 261 2.98E-66 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily AM378_21875 afab18a28a36b1f9d856fe0ed13cee77 136 SUPERFAMILY SSF55729 40 113 2.66E-10 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase AM378_21875 afab18a28a36b1f9d856fe0ed13cee77 136 Gene3D G3DSA:3.40.630.30 18 132 1.5E-21 T 15-10-2018 AM378_21875 afab18a28a36b1f9d856fe0ed13cee77 136 Pfam PF00583 Acetyltransferase (GNAT) family 52 103 3.6E-5 T 15-10-2018 IPR000182 GNAT domain AM378_10145 bbf9c280fc00e41657a2277fa1b96608 280 Gene3D G3DSA:3.40.140.10 127 279 9.8E-43 T 15-10-2018 AM378_10145 bbf9c280fc00e41657a2277fa1b96608 280 PIRSF PIRSF015626 8 276 1.3E-78 T 15-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 AM378_10145 bbf9c280fc00e41657a2277fa1b96608 280 Pfam PF02634 FdhD/NarQ family 38 273 1.1E-70 T 15-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 AM378_10145 bbf9c280fc00e41657a2277fa1b96608 280 Hamap MF_00187 Sulfur carrier protein FdhD [fdhD]. 15 274 32.173 T 15-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 AM378_10145 bbf9c280fc00e41657a2277fa1b96608 280 TIGRFAM TIGR00129 fdhD_narQ: formate dehydrogenase family accessory protein FdhD 34 273 4.7E-87 T 15-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 AM378_10145 bbf9c280fc00e41657a2277fa1b96608 280 Gene3D G3DSA:3.10.20.10 40 125 2.1E-10 T 15-10-2018 AM378_10145 bbf9c280fc00e41657a2277fa1b96608 280 SUPERFAMILY SSF53927 20 273 2.17E-77 T 15-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 AM378_13520 6f3b562f15d5dfbe7f49ac0ed189f2d7 478 SUPERFAMILY SSF55874 325 473 3.14E-32 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AM378_13520 6f3b562f15d5dfbe7f49ac0ed189f2d7 478 SMART SM00388 252 320 1.1E-16 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM378_13520 6f3b562f15d5dfbe7f49ac0ed189f2d7 478 Gene3D G3DSA:1.10.287.130 196 316 3.6E-18 T 15-10-2018 AM378_13520 6f3b562f15d5dfbe7f49ac0ed189f2d7 478 Pfam PF00512 His Kinase A (phospho-acceptor) domain 253 316 4.0E-13 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM378_13520 6f3b562f15d5dfbe7f49ac0ed189f2d7 478 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 366 474 4.8E-17 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AM378_13520 6f3b562f15d5dfbe7f49ac0ed189f2d7 478 SMART SM00387 363 475 8.4E-28 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AM378_13520 6f3b562f15d5dfbe7f49ac0ed189f2d7 478 PRINTS PR00344 Bacterial sensor protein C-terminal signature 418 428 3.9E-10 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM378_13520 6f3b562f15d5dfbe7f49ac0ed189f2d7 478 PRINTS PR00344 Bacterial sensor protein C-terminal signature 435 453 3.9E-10 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM378_13520 6f3b562f15d5dfbe7f49ac0ed189f2d7 478 PRINTS PR00344 Bacterial sensor protein C-terminal signature 459 472 3.9E-10 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM378_13520 6f3b562f15d5dfbe7f49ac0ed189f2d7 478 PRINTS PR00344 Bacterial sensor protein C-terminal signature 400 414 3.9E-10 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM378_13520 6f3b562f15d5dfbe7f49ac0ed189f2d7 478 SUPERFAMILY SSF47384 235 316 3.92E-16 T 15-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AM378_13520 6f3b562f15d5dfbe7f49ac0ed189f2d7 478 Gene3D G3DSA:3.30.565.10 325 478 1.3E-32 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AM378_01660 445d8724a8795c61b3cae691d1dff92a 259 Gene3D G3DSA:3.40.50.300 3 238 1.5E-63 T 15-10-2018 AM378_01660 445d8724a8795c61b3cae691d1dff92a 259 Pfam PF00005 ABC transporter 23 158 3.4E-26 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM378_01660 445d8724a8795c61b3cae691d1dff92a 259 SUPERFAMILY SSF52540 4 219 1.47E-53 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_01660 445d8724a8795c61b3cae691d1dff92a 259 SMART SM00382 31 207 2.5E-16 T 15-10-2018 IPR003593 AAA+ ATPase domain AM378_01660 445d8724a8795c61b3cae691d1dff92a 259 ProSitePatterns PS00211 ABC transporters family signature. 130 144 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM378_13435 b3bf6d3640bd45def56da5ad16c8c6ae 417 PIRSF PIRSF000412 1 416 1.5E-174 T 15-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 AM378_13435 b3bf6d3640bd45def56da5ad16c8c6ae 417 SUPERFAMILY SSF53383 6 416 5.23E-183 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM378_13435 b3bf6d3640bd45def56da5ad16c8c6ae 417 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 221 237 - T 15-10-2018 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 AM378_13435 b3bf6d3640bd45def56da5ad16c8c6ae 417 Gene3D G3DSA:3.40.640.10 37 289 2.2E-186 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AM378_13435 b3bf6d3640bd45def56da5ad16c8c6ae 417 Gene3D G3DSA:3.90.1150.10 10 395 2.2E-186 T 15-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AM378_13435 b3bf6d3640bd45def56da5ad16c8c6ae 417 Pfam PF00464 Serine hydroxymethyltransferase 8 386 2.5E-189 T 15-10-2018 IPR039429 Serine hydroxymethyltransferase-like domain KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 AM378_13435 b3bf6d3640bd45def56da5ad16c8c6ae 417 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 7 417 52.842 T 15-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 AM378_23630 fd7f028e9d84f4a5a23a67f6f0afbd62 415 Gene3D G3DSA:3.40.50.1820 16 414 3.5E-98 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold AM378_23630 fd7f028e9d84f4a5a23a67f6f0afbd62 415 Pfam PF06500 Alpha/beta hydrolase of unknown function (DUF1100) 1 414 1.9E-193 T 15-10-2018 IPR010520 UPF0255 family AM378_23630 fd7f028e9d84f4a5a23a67f6f0afbd62 415 Hamap MF_01063 Esterase FrsA [frsA]. 1 415 60.615 T 15-10-2018 IPR010520 UPF0255 family AM378_23630 fd7f028e9d84f4a5a23a67f6f0afbd62 415 SUPERFAMILY SSF53474 46 391 7.71E-45 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold AM378_05685 2822aa094020b40a5faa2e2c12f5dca2 138 Hamap MF_01936 1,4-dihydroxy-2-naphthoyl-CoA hydrolase [menI]. 2 137 43.176 T 15-10-2018 IPR030863 1,4-dihydroxy-2-naphthoyl-CoA hydrolase, MenI GO:0009234|GO:0061522 KEGG: 00130+3.1.2.28|MetaCyc: PWY-5837 AM378_05685 2822aa094020b40a5faa2e2c12f5dca2 138 Pfam PF03061 Thioesterase superfamily 51 128 9.3E-15 T 15-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 AM378_05685 2822aa094020b40a5faa2e2c12f5dca2 138 SUPERFAMILY SSF54637 21 138 3.07E-30 T 15-10-2018 IPR029069 HotDog domain superfamily AM378_05685 2822aa094020b40a5faa2e2c12f5dca2 138 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 21 136 1.1E-43 T 15-10-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 AM378_05685 2822aa094020b40a5faa2e2c12f5dca2 138 Gene3D G3DSA:3.10.129.10 1 138 7.6E-59 T 15-10-2018 AM378_01765 f3f3fb20a7b493c04c9d7c0f9564c5be 218 Gene3D G3DSA:3.40.50.10610 24 188 1.0E-65 T 15-10-2018 AM378_01765 f3f3fb20a7b493c04c9d7c0f9564c5be 218 Pfam PF05643 Putative bacterial lipoprotein (DUF799) 10 210 9.0E-95 T 15-10-2018 IPR008517 Protein of unknown function DUF799 AM378_02870 f69fdfde1a2f735b1e998ff97b10bb29 304 Gene3D G3DSA:3.90.550.10 4 239 6.2E-29 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AM378_02870 f69fdfde1a2f735b1e998ff97b10bb29 304 SUPERFAMILY SSF53448 6 228 2.06E-37 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AM378_02870 f69fdfde1a2f735b1e998ff97b10bb29 304 Pfam PF00535 Glycosyl transferase family 2 6 107 1.6E-14 T 15-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 AM378_11030 e2bb4baa18d22cb34e5221195436f3a6 402 Gene3D G3DSA:2.70.98.80 19 402 8.8E-140 T 15-10-2018 AM378_11030 e2bb4baa18d22cb34e5221195436f3a6 402 Pfam PF14486 Domain of unknown function (DUF4432) 63 368 2.0E-110 T 15-10-2018 IPR027839 Protein of unknown function DUF4432 AM378_06875 fdee414ead3f6ae12706578837e32a4f 489 Gene3D G3DSA:3.90.1150.170 45 481 9.0E-131 T 15-10-2018 AM378_06875 fdee414ead3f6ae12706578837e32a4f 489 Pfam PF00282 Pyridoxal-dependent decarboxylase conserved domain 66 417 2.0E-63 T 15-10-2018 IPR002129 Pyridoxal phosphate-dependent decarboxylase GO:0016831|GO:0019752|GO:0030170 AM378_06875 fdee414ead3f6ae12706578837e32a4f 489 SUPERFAMILY SSF53383 15 487 4.52E-118 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM378_06875 fdee414ead3f6ae12706578837e32a4f 489 Gene3D G3DSA:3.40.640.10 109 360 9.0E-131 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AM378_16535 e81df0d4f42c81e36d54534038ea0d2a 472 TIGRFAM TIGR01318 gltD_gamma_fam: glutamate synthase, small subunit 6 472 3.6E-260 T 15-10-2018 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 GO:0006537|GO:0016639 AM378_16535 e81df0d4f42c81e36d54534038ea0d2a 472 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 25 134 3.2E-38 T 15-10-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 AM378_16535 e81df0d4f42c81e36d54534038ea0d2a 472 SUPERFAMILY SSF46548 7 157 5.23E-42 T 15-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 AM378_16535 e81df0d4f42c81e36d54534038ea0d2a 472 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 147 459 2.2E-23 T 15-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM378_16535 e81df0d4f42c81e36d54534038ea0d2a 472 SUPERFAMILY SSF51971 145 401 2.24E-67 T 15-10-2018 AM378_16535 e81df0d4f42c81e36d54534038ea0d2a 472 Gene3D G3DSA:1.10.1060.10 13 146 4.9E-35 T 15-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 AM378_16535 e81df0d4f42c81e36d54534038ea0d2a 472 PRINTS PR00419 Adrenodoxin reductase family signature 324 337 7.2E-38 T 15-10-2018 AM378_16535 e81df0d4f42c81e36d54534038ea0d2a 472 PRINTS PR00419 Adrenodoxin reductase family signature 171 184 7.2E-38 T 15-10-2018 AM378_16535 e81df0d4f42c81e36d54534038ea0d2a 472 PRINTS PR00419 Adrenodoxin reductase family signature 148 170 7.2E-38 T 15-10-2018 AM378_16535 e81df0d4f42c81e36d54534038ea0d2a 472 PRINTS PR00419 Adrenodoxin reductase family signature 213 223 7.2E-38 T 15-10-2018 AM378_16535 e81df0d4f42c81e36d54534038ea0d2a 472 PRINTS PR00419 Adrenodoxin reductase family signature 290 304 7.2E-38 T 15-10-2018 AM378_16535 e81df0d4f42c81e36d54534038ea0d2a 472 Gene3D G3DSA:3.50.50.60 248 400 4.1E-43 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AM378_16535 e81df0d4f42c81e36d54534038ea0d2a 472 Gene3D G3DSA:3.50.50.60 147 225 3.6E-10 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AM378_14820 6ad50ff1a5326424823509e0d50dcdde 410 SUPERFAMILY SSF53383 5 406 8.2E-93 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM378_14820 6ad50ff1a5326424823509e0d50dcdde 410 Gene3D G3DSA:3.40.640.10 33 289 4.7E-129 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AM378_14820 6ad50ff1a5326424823509e0d50dcdde 410 TIGRFAM TIGR01976 am_tr_V_VC1184: cysteine desulfurase family protein 3 403 3.8E-152 T 15-10-2018 IPR011340 Cysteine desulfurase-related AM378_14820 6ad50ff1a5326424823509e0d50dcdde 410 Gene3D G3DSA:3.90.1150.10 24 403 4.7E-129 T 15-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AM378_14820 6ad50ff1a5326424823509e0d50dcdde 410 Pfam PF00266 Aminotransferase class-V 25 400 4.4E-68 T 15-10-2018 IPR000192 Aminotransferase class V domain AM378_06915 430efcb7ca102751736400a65ff812b5 282 Pfam PF12833 Helix-turn-helix domain 198 275 2.7E-18 T 15-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM378_06915 430efcb7ca102751736400a65ff812b5 282 Gene3D G3DSA:1.10.10.60 175 278 4.7E-26 T 15-10-2018 AM378_06915 430efcb7ca102751736400a65ff812b5 282 SUPERFAMILY SSF46689 228 277 2.26E-9 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AM378_06915 430efcb7ca102751736400a65ff812b5 282 SUPERFAMILY SSF46689 177 225 8.36E-11 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AM378_06915 430efcb7ca102751736400a65ff812b5 282 SMART SM00342 191 273 8.7E-21 T 15-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM378_06915 430efcb7ca102751736400a65ff812b5 282 SUPERFAMILY SSF51215 20 161 7.85E-24 T 15-10-2018 IPR037923 Transcription regulator HTH-like AM378_06915 430efcb7ca102751736400a65ff812b5 282 Pfam PF02311 AraC-like ligand binding domain 23 155 2.6E-20 T 15-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 AM378_12650 179f3b8ddf109d718fe40095f72e4637 154 Pfam PF11143 Protein of unknown function (DUF2919) 8 148 2.4E-47 T 15-10-2018 IPR021318 Protein of unknown function DUF2919 AM378_23575 28cd9f51a3f4adba9e7f3b3efef2eb4b 198 PIRSF PIRSF006102 1 198 5.7E-65 T 15-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 AM378_23575 28cd9f51a3f4adba9e7f3b3efef2eb4b 198 Hamap MF_00429 Na(+)-translocating NADH-quinone reductase subunit E [nqrE]. 1 198 30.024 T 15-10-2018 IPR010967 Na(+)-translocating NADH-quinone reductase subunit E GO:0009276|GO:0016021|GO:0016655|GO:0022904|GO:0055114 AM378_23575 28cd9f51a3f4adba9e7f3b3efef2eb4b 198 TIGRFAM TIGR01940 nqrE: NADH:ubiquinone oxidoreductase, Na(+)-translocating, E subunit 2 197 6.4E-106 T 15-10-2018 IPR010967 Na(+)-translocating NADH-quinone reductase subunit E GO:0009276|GO:0016021|GO:0016655|GO:0022904|GO:0055114 AM378_23575 28cd9f51a3f4adba9e7f3b3efef2eb4b 198 Pfam PF02508 Rnf-Nqr subunit, membrane protein 4 196 1.9E-59 T 15-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 AM378_24320 ae8505e94bbe947c8db1e7db074005e0 112 TIGRFAM TIGR02847 CyoD: cytochrome o ubiquinol oxidase subunit IV 15 110 9.1E-40 T 15-10-2018 IPR014210 Cytochrome o ubiquinol oxidase subunit IV GO:0008827|GO:0015990|GO:0016021 AM378_24320 ae8505e94bbe947c8db1e7db074005e0 112 Pfam PF03626 Prokaryotic Cytochrome C oxidase subunit IV 22 95 2.4E-18 T 15-10-2018 IPR005171 Cytochrome C oxidase subunit IV, prokaryotes GO:0016021 AM378_09960 79ff414d3aa8635e3ded2ab85268c0a7 167 Gene3D G3DSA:3.90.1720.70 1 167 5.1E-57 T 15-10-2018 AM378_09960 79ff414d3aa8635e3ded2ab85268c0a7 167 Pfam PF14113 Type VI secretion system (T6SS), amidase effector protein 4 46 150 6.9E-25 T 15-10-2018 IPR025562 Type VI secretion system (T6SS), amidase effector protein 4 AM378_02495 6a3de6443bd0326b4a2534e5c6078b0d 298 SUPERFAMILY SSF46785 7 112 1.15E-21 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM378_02495 6a3de6443bd0326b4a2534e5c6078b0d 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 63 7.8E-19 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_02495 6a3de6443bd0326b4a2534e5c6078b0d 298 Gene3D G3DSA:3.40.190.10 164 264 9.1E-69 T 15-10-2018 AM378_02495 6a3de6443bd0326b4a2534e5c6078b0d 298 Pfam PF03466 LysR substrate binding domain 88 292 6.4E-45 T 15-10-2018 IPR005119 LysR, substrate-binding AM378_02495 6a3de6443bd0326b4a2534e5c6078b0d 298 Gene3D G3DSA:1.10.10.10 4 90 2.9E-25 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_02495 6a3de6443bd0326b4a2534e5c6078b0d 298 Gene3D G3DSA:3.40.190.10 91 290 9.1E-69 T 15-10-2018 AM378_02495 6a3de6443bd0326b4a2534e5c6078b0d 298 SUPERFAMILY SSF53850 88 292 9.23E-47 T 15-10-2018 AM378_24080 ee24fbee580b741654b91fb9d65d2427 263 Gene3D G3DSA:3.30.1150.10 133 263 4.5E-38 T 15-10-2018 AM378_24080 ee24fbee580b741654b91fb9d65d2427 263 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 180 258 1.1E-14 T 15-10-2018 IPR006260 TonB/TolA, C-terminal AM378_24080 ee24fbee580b741654b91fb9d65d2427 263 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 180 258 1.4E-13 T 15-10-2018 IPR037682 TonB, C-terminal GO:0055085 AM378_24080 ee24fbee580b741654b91fb9d65d2427 263 SUPERFAMILY SSF74653 142 259 5.59E-21 T 15-10-2018 AM378_19740 dd147b20f4ffff1dbfa85b808afc03f0 399 SUPERFAMILY SSF103473 8 395 8.24E-49 T 15-10-2018 IPR036259 MFS transporter superfamily AM378_19740 dd147b20f4ffff1dbfa85b808afc03f0 399 Pfam PF07690 Major Facilitator Superfamily 24 351 1.9E-22 T 15-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM378_19740 dd147b20f4ffff1dbfa85b808afc03f0 399 Gene3D G3DSA:1.20.1250.20 208 396 7.9E-21 T 15-10-2018 AM378_19740 dd147b20f4ffff1dbfa85b808afc03f0 399 Gene3D G3DSA:1.20.1250.20 9 197 9.7E-11 T 15-10-2018 AM378_18780 744e8cfa2666d6004368cc9a7a33199f 194 Pfam PF07305 Protein of unknown function (DUF1454) 7 193 1.3E-80 T 15-10-2018 IPR009918 Protein of unknown function DUF1454 AM378_09110 57490653147c6a7bb678e780c660744e 335 SUPERFAMILY SSF53901 12 333 1.33E-42 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 AM378_09110 57490653147c6a7bb678e780c660744e 335 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 246 333 2.3E-23 T 15-10-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 AM378_09110 57490653147c6a7bb678e780c660744e 335 Gene3D G3DSA:3.40.47.10 11 334 6.3E-83 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 AM378_09110 57490653147c6a7bb678e780c660744e 335 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 117 193 4.1E-21 T 15-10-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 AM378_11905 61f69ee64415154bb9e4c211cc550781 123 Gene3D G3DSA:3.30.1130.10 3 122 1.7E-42 T 15-10-2018 AM378_11905 61f69ee64415154bb9e4c211cc550781 123 SUPERFAMILY SSF55620 9 121 2.06E-28 T 15-10-2018 AM378_11905 61f69ee64415154bb9e4c211cc550781 123 TIGRFAM TIGR00526 folB_dom: FolB domain 9 122 5.5E-36 T 15-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 AM378_11905 61f69ee64415154bb9e4c211cc550781 123 SMART SM00905 10 120 7.9E-32 T 15-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 AM378_11905 61f69ee64415154bb9e4c211cc550781 123 Pfam PF02152 Dihydroneopterin aldolase 10 118 7.7E-24 T 15-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 AM378_01445 f881bce89b504fc6a7c4d3d0d22020f9 513 SMART SM00387 419 508 2.1E-10 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AM378_01445 f881bce89b504fc6a7c4d3d0d22020f9 513 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 423 506 2.1E-7 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AM378_01445 f881bce89b504fc6a7c4d3d0d22020f9 513 Pfam PF07730 Histidine kinase 316 380 2.8E-14 T 15-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 AM378_01445 f881bce89b504fc6a7c4d3d0d22020f9 513 Pfam PF05231 MASE1 11 281 1.0E-41 T 15-10-2018 IPR007895 MASE1 AM378_01445 f881bce89b504fc6a7c4d3d0d22020f9 513 Gene3D G3DSA:3.30.565.10 387 507 2.6E-28 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AM378_01445 f881bce89b504fc6a7c4d3d0d22020f9 513 SUPERFAMILY SSF55874 396 505 1.96E-18 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AM378_14385 50ae68127690982235e68b4628decb57 454 Pfam PF03641 Possible lysine decarboxylase 190 329 9.4E-34 T 15-10-2018 IPR031100 LOG family AM378_14385 50ae68127690982235e68b4628decb57 454 SUPERFAMILY SSF102405 119 330 1.83E-42 T 15-10-2018 AM378_14385 50ae68127690982235e68b4628decb57 454 Pfam PF14793 Domain of unknown function (DUF4478) 4 110 5.3E-47 T 15-10-2018 IPR027820 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidase YgdH, N-terminal KEGG: 00230+3.2.2.4|KEGG: 00240+3.2.2.10|MetaCyc: PWY-6617|MetaCyc: PWY-7569|MetaCyc: PWY-7570 AM378_14385 50ae68127690982235e68b4628decb57 454 Pfam PF11892 Domain of unknown function (DUF3412) 333 453 9.7E-57 T 15-10-2018 IPR021826 Domain of unknown function DUF3412 KEGG: 00230+3.2.2.4|KEGG: 00240+3.2.2.10|MetaCyc: PWY-6617|MetaCyc: PWY-7569|MetaCyc: PWY-7570 AM378_14385 50ae68127690982235e68b4628decb57 454 Gene3D G3DSA:3.40.50.450 124 452 2.4E-122 T 15-10-2018 AM378_14385 50ae68127690982235e68b4628decb57 454 Gene3D G3DSA:3.30.1850.10 1 121 2.2E-52 T 15-10-2018 IPR037153 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidase YgdH-like superfamily KEGG: 00230+3.2.2.4|KEGG: 00240+3.2.2.10|MetaCyc: PWY-6617|MetaCyc: PWY-7569|MetaCyc: PWY-7570 AM378_01980 3699def7fbe0537b410196caa383337a 207 Pfam PF13417 Glutathione S-transferase, N-terminal domain 4 78 2.4E-15 T 15-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AM378_01980 3699def7fbe0537b410196caa383337a 207 Gene3D G3DSA:1.20.1050.10 84 202 7.0E-40 T 15-10-2018 AM378_01980 3699def7fbe0537b410196caa383337a 207 Gene3D G3DSA:3.40.30.10 1 82 2.3E-30 T 15-10-2018 AM378_01980 3699def7fbe0537b410196caa383337a 207 Pfam PF13410 Glutathione S-transferase, C-terminal domain 126 188 5.6E-6 T 15-10-2018 AM378_01980 3699def7fbe0537b410196caa383337a 207 SUPERFAMILY SSF47616 80 200 4.32E-27 T 15-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily AM378_01980 3699def7fbe0537b410196caa383337a 207 SUPERFAMILY SSF52833 1 85 1.42E-21 T 15-10-2018 IPR036249 Thioredoxin-like superfamily AM378_23620 555809fc7b290a60a508713cda09c396 486 Pfam PF07687 Peptidase dimerisation domain 207 292 3.5E-7 T 15-10-2018 IPR011650 Peptidase M20, dimerisation domain AM378_23620 555809fc7b290a60a508713cda09c396 486 TIGRFAM TIGR01893 aa-his-dipept: Xaa-His dipeptidase 8 482 1.4E-181 T 15-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 AM378_23620 555809fc7b290a60a508713cda09c396 486 Pfam PF01546 Peptidase family M20/M25/M40 72 480 3.0E-20 T 15-10-2018 IPR002933 Peptidase M20 GO:0016787 AM378_23620 555809fc7b290a60a508713cda09c396 486 PIRSF PIRSF016599 1 485 1.4E-209 T 15-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 AM378_23620 555809fc7b290a60a508713cda09c396 486 SUPERFAMILY SSF53187 10 482 1.6E-63 T 15-10-2018 AM378_23620 555809fc7b290a60a508713cda09c396 486 PRINTS PR00934 X-His dipeptidase (M25) signature 251 270 3.1E-99 T 15-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 AM378_23620 555809fc7b290a60a508713cda09c396 486 PRINTS PR00934 X-His dipeptidase (M25) signature 363 381 3.1E-99 T 15-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 AM378_23620 555809fc7b290a60a508713cda09c396 486 PRINTS PR00934 X-His dipeptidase (M25) signature 450 472 3.1E-99 T 15-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 AM378_23620 555809fc7b290a60a508713cda09c396 486 PRINTS PR00934 X-His dipeptidase (M25) signature 206 223 3.1E-99 T 15-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 AM378_23620 555809fc7b290a60a508713cda09c396 486 PRINTS PR00934 X-His dipeptidase (M25) signature 101 119 3.1E-99 T 15-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 AM378_23620 555809fc7b290a60a508713cda09c396 486 PRINTS PR00934 X-His dipeptidase (M25) signature 135 152 3.1E-99 T 15-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 AM378_23620 555809fc7b290a60a508713cda09c396 486 PRINTS PR00934 X-His dipeptidase (M25) signature 159 177 3.1E-99 T 15-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 AM378_23620 555809fc7b290a60a508713cda09c396 486 PRINTS PR00934 X-His dipeptidase (M25) signature 428 444 3.1E-99 T 15-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 AM378_23620 555809fc7b290a60a508713cda09c396 486 PRINTS PR00934 X-His dipeptidase (M25) signature 80 99 3.1E-99 T 15-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 AM378_23620 555809fc7b290a60a508713cda09c396 486 Gene3D G3DSA:3.40.630.10 1 229 3.2E-62 T 15-10-2018 AM378_23620 555809fc7b290a60a508713cda09c396 486 Gene3D G3DSA:3.40.630.10 354 486 1.7E-23 T 15-10-2018 AM378_08000 9e789a1d8b8328c887c94f9f581740a5 266 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 32 264 1.3E-63 T 15-10-2018 AM378_08000 9e789a1d8b8328c887c94f9f581740a5 266 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 159 187 - T 15-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AM378_08000 9e789a1d8b8328c887c94f9f581740a5 266 Gene3D G3DSA:3.40.50.720 4 266 1.8E-80 T 15-10-2018 AM378_08000 9e789a1d8b8328c887c94f9f581740a5 266 SUPERFAMILY SSF51735 22 265 1.68E-75 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily AM378_08000 9e789a1d8b8328c887c94f9f581740a5 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 24 41 2.1E-35 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_08000 9e789a1d8b8328c887c94f9f581740a5 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 172 191 2.1E-35 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_08000 9e789a1d8b8328c887c94f9f581740a5 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 98 109 2.1E-35 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_08000 9e789a1d8b8328c887c94f9f581740a5 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 146 162 2.1E-35 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_08000 9e789a1d8b8328c887c94f9f581740a5 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 193 210 2.1E-35 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_08000 9e789a1d8b8328c887c94f9f581740a5 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 227 247 2.1E-35 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_08000 9e789a1d8b8328c887c94f9f581740a5 266 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 172 191 9.0E-11 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_08000 9e789a1d8b8328c887c94f9f581740a5 266 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 98 109 9.0E-11 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_08000 9e789a1d8b8328c887c94f9f581740a5 266 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 152 160 9.0E-11 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_04985 d857a9ef2f18afca6ae8038c8c6c2e28 504 Gene3D G3DSA:1.10.10.10 28 130 6.0E-15 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_04985 d857a9ef2f18afca6ae8038c8c6c2e28 504 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 64 80 1.8E-5 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM378_04985 d857a9ef2f18afca6ae8038c8c6c2e28 504 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 50 64 1.8E-5 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM378_04985 d857a9ef2f18afca6ae8038c8c6c2e28 504 Pfam PF00155 Aminotransferase class I and II 151 416 7.8E-27 T 15-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AM378_04985 d857a9ef2f18afca6ae8038c8c6c2e28 504 Pfam PF00392 Bacterial regulatory proteins, gntR family 30 90 9.1E-12 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM378_04985 d857a9ef2f18afca6ae8038c8c6c2e28 504 SMART SM00345 31 90 1.9E-10 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM378_04985 d857a9ef2f18afca6ae8038c8c6c2e28 504 Gene3D G3DSA:3.40.640.10 131 489 1.7E-116 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AM378_04985 d857a9ef2f18afca6ae8038c8c6c2e28 504 SUPERFAMILY SSF53383 139 496 1.32E-90 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM378_04985 d857a9ef2f18afca6ae8038c8c6c2e28 504 SUPERFAMILY SSF46785 23 94 2.06E-15 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM378_02435 aa36ab2527d534914ee483faf667d4d1 238 SMART SM00052 1 229 5.9E-6 T 15-10-2018 IPR001633 EAL domain AM378_02435 aa36ab2527d534914ee483faf667d4d1 238 SUPERFAMILY SSF141868 8 222 3.27E-27 T 15-10-2018 IPR035919 EAL domain superfamily AM378_02435 aa36ab2527d534914ee483faf667d4d1 238 Gene3D G3DSA:3.20.20.450 4 235 4.0E-41 T 15-10-2018 IPR035919 EAL domain superfamily AM378_02435 aa36ab2527d534914ee483faf667d4d1 238 Pfam PF00563 EAL domain 8 222 1.8E-28 T 15-10-2018 IPR001633 EAL domain AM378_19945 98b821560179463e084a5ab5b2405cc8 1157 SUPERFAMILY SSF48452 99 341 5.77E-10 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AM378_19945 98b821560179463e084a5ab5b2405cc8 1157 Gene3D G3DSA:1.25.40.10 348 452 4.8E-12 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AM378_19945 98b821560179463e084a5ab5b2405cc8 1157 SUPERFAMILY SSF48452 273 531 2.66E-18 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AM378_19945 98b821560179463e084a5ab5b2405cc8 1157 Gene3D G3DSA:1.25.40.10 465 742 9.3E-23 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AM378_19945 98b821560179463e084a5ab5b2405cc8 1157 Gene3D G3DSA:1.25.40.10 45 231 6.3E-7 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AM378_19945 98b821560179463e084a5ab5b2405cc8 1157 SUPERFAMILY SSF48452 470 700 6.2E-13 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AM378_19945 98b821560179463e084a5ab5b2405cc8 1157 Pfam PF13432 Tetratricopeptide repeat 359 421 7.6E-5 T 15-10-2018 AM378_19945 98b821560179463e084a5ab5b2405cc8 1157 Pfam PF13432 Tetratricopeptide repeat 278 337 2.1E-6 T 15-10-2018 AM378_19945 98b821560179463e084a5ab5b2405cc8 1157 SMART SM00028 714 747 460.0 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AM378_19945 98b821560179463e084a5ab5b2405cc8 1157 SMART SM00028 306 339 0.041 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AM378_19945 98b821560179463e084a5ab5b2405cc8 1157 SMART SM00028 272 305 100.0 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AM378_19945 98b821560179463e084a5ab5b2405cc8 1157 SMART SM00028 388 421 1.3 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AM378_19945 98b821560179463e084a5ab5b2405cc8 1157 SMART SM00028 354 387 200.0 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AM378_19945 98b821560179463e084a5ab5b2405cc8 1157 SMART SM00028 606 639 170.0 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AM378_19945 98b821560179463e084a5ab5b2405cc8 1157 SMART SM00028 464 497 0.067 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AM378_19945 98b821560179463e084a5ab5b2405cc8 1157 Pfam PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) 805 1136 2.0E-125 T 15-10-2018 IPR008410 Cellulose synthase operon C, C-terminal GO:0019867|GO:0030244 AM378_19945 98b821560179463e084a5ab5b2405cc8 1157 Gene3D G3DSA:1.25.40.10 257 347 1.6E-9 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AM378_19945 98b821560179463e084a5ab5b2405cc8 1157 Pfam PF14559 Tetratricopeptide repeat 616 665 4.0E-8 T 15-10-2018 AM378_19945 98b821560179463e084a5ab5b2405cc8 1157 Pfam PF14559 Tetratricopeptide repeat 474 539 1.5E-7 T 15-10-2018 AM378_01255 d4b913855558c634bf5a74800ad2b214 341 Gene3D G3DSA:1.10.3470.10 9 341 1.4E-95 T 15-10-2018 IPR037294 ABC transporter, BtuC-like AM378_01255 d4b913855558c634bf5a74800ad2b214 341 SUPERFAMILY SSF81345 9 337 6.28E-76 T 15-10-2018 IPR037294 ABC transporter, BtuC-like AM378_01255 d4b913855558c634bf5a74800ad2b214 341 Pfam PF01032 FecCD transport family 23 337 8.1E-89 T 15-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 AM378_16880 fd543d209b3856ac2bf3086db035df57 325 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 86 2.1E-5 T 15-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AM378_16880 fd543d209b3856ac2bf3086db035df57 325 SMART SM00829 9 322 0.0056 T 15-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AM378_16880 fd543d209b3856ac2bf3086db035df57 325 Pfam PF00107 Zinc-binding dehydrogenase 158 282 4.1E-16 T 15-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AM378_16880 fd543d209b3856ac2bf3086db035df57 325 SUPERFAMILY SSF50129 1 143 8.37E-45 T 15-10-2018 IPR011032 GroES-like superfamily AM378_16880 fd543d209b3856ac2bf3086db035df57 325 Gene3D G3DSA:3.90.180.10 16 323 5.0E-127 T 15-10-2018 AM378_16880 fd543d209b3856ac2bf3086db035df57 325 TIGRFAM TIGR02823 oxido_YhdH: putative quinone oxidoreductase, YhdH/YhfP family 2 324 7.1E-138 T 15-10-2018 IPR014188 Acrylyl-CoA reductase AcuI AM378_16880 fd543d209b3856ac2bf3086db035df57 325 SUPERFAMILY SSF51735 116 287 3.7E-40 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily AM378_16880 fd543d209b3856ac2bf3086db035df57 325 Gene3D G3DSA:3.40.50.720 125 292 5.0E-127 T 15-10-2018 AM378_00600 43d1bbcceb3714208abaaf3e727c88ec 175 Pfam PF00583 Acetyltransferase (GNAT) family 33 131 1.9E-9 T 15-10-2018 IPR000182 GNAT domain AM378_00600 43d1bbcceb3714208abaaf3e727c88ec 175 Gene3D G3DSA:3.40.630.30 5 161 4.0E-23 T 15-10-2018 AM378_00600 43d1bbcceb3714208abaaf3e727c88ec 175 SUPERFAMILY SSF55729 9 137 2.4E-20 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase AM378_09820 0318577bcd303a20a7054825e74069ab 296 Pfam PF01618 MotA/TolQ/ExbB proton channel family 138 239 2.3E-11 T 15-10-2018 IPR002898 MotA/TolQ/ExbB proton channel AM378_09820 0318577bcd303a20a7054825e74069ab 296 ProSitePatterns PS01307 Flagellar motor protein motA family signature. 205 222 - T 15-10-2018 IPR000540 Flagellar motor protein MotA, conserved site AM378_09820 0318577bcd303a20a7054825e74069ab 296 TIGRFAM TIGR03818 MotA1: flagellar motor stator protein MotA 2 281 2.6E-118 T 15-10-2018 IPR022522 Flagellar motor stator, MotA AM378_19995 5db0f4592bd45c4f0f3c536f60cc5d86 365 Hamap MF_02030 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase [wecA]. 9 353 28.87 T 15-10-2018 IPR012750 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase GO:0000287|GO:0009103|GO:0009276|GO:0016021|GO:0016780|GO:0030145 MetaCyc: PWY-7290|MetaCyc: PWY-7530|MetaCyc: PWY-7815|MetaCyc: PWY-7816|MetaCyc: PWY-7819|MetaCyc: PWY-7905 AM378_19995 5db0f4592bd45c4f0f3c536f60cc5d86 365 Pfam PF00953 Glycosyl transferase family 4 76 232 7.6E-27 T 15-10-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 AM378_19995 5db0f4592bd45c4f0f3c536f60cc5d86 365 TIGRFAM TIGR02380 ECA_wecA: undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase 8 350 5.0E-162 T 15-10-2018 IPR012750 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase GO:0000287|GO:0009103|GO:0009276|GO:0016021|GO:0016780|GO:0030145 MetaCyc: PWY-7290|MetaCyc: PWY-7530|MetaCyc: PWY-7815|MetaCyc: PWY-7816|MetaCyc: PWY-7819|MetaCyc: PWY-7905 AM378_06685 635ff0e7b5eb53cdd954111959b754d2 355 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 137 242 1.1E-14 T 15-10-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 AM378_06685 635ff0e7b5eb53cdd954111959b754d2 355 SUPERFAMILY SSF51735 4 202 4.23E-50 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily AM378_06685 635ff0e7b5eb53cdd954111959b754d2 355 Gene3D G3DSA:3.30.360.10 130 334 2.4E-129 T 15-10-2018 AM378_06685 635ff0e7b5eb53cdd954111959b754d2 355 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 9 123 6.0E-24 T 15-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 AM378_06685 635ff0e7b5eb53cdd954111959b754d2 355 Gene3D G3DSA:3.40.50.720 9 316 2.4E-129 T 15-10-2018 AM378_03575 234c338326a1079eb8cae91a755182ae 182 SUPERFAMILY SSF55166 68 182 6.02E-33 T 15-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 AM378_03575 234c338326a1079eb8cae91a755182ae 182 Pfam PF05951 Bacterial protein of unknown function (DUF882) 34 182 1.0E-61 T 15-10-2018 IPR010275 Protein of unknown function DUF882 AM378_03575 234c338326a1079eb8cae91a755182ae 182 Gene3D G3DSA:3.30.1380.10 61 182 5.1E-11 T 15-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 AM378_07170 a1bc94c509c6cdf681e7490719324658 201 Pfam PF00881 Nitroreductase family 7 178 1.5E-30 T 15-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 AM378_07170 a1bc94c509c6cdf681e7490719324658 201 SUPERFAMILY SSF55469 1 197 5.63E-49 T 15-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 AM378_07170 a1bc94c509c6cdf681e7490719324658 201 Gene3D G3DSA:3.40.109.10 1 198 2.2E-45 T 15-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 AM378_16820 5dd6a8c344d31c7d76e6cbbb2ba7a566 314 Pfam PF01156 Inosine-uridine preferring nucleoside hydrolase 3 301 2.7E-94 T 15-10-2018 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain AM378_16820 5dd6a8c344d31c7d76e6cbbb2ba7a566 314 ProSitePatterns PS01247 Inosine-uridine preferring nucleoside hydrolase family signature. 8 18 - T 15-10-2018 IPR015910 Inosine/uridine-preferring nucleoside hydrolase, conserved site GO:0016799 AM378_16820 5dd6a8c344d31c7d76e6cbbb2ba7a566 314 SUPERFAMILY SSF53590 2 311 1.05E-106 T 15-10-2018 IPR036452 Ribonucleoside hydrolase-like AM378_16820 5dd6a8c344d31c7d76e6cbbb2ba7a566 314 Gene3D G3DSA:3.90.245.10 1 314 1.6E-126 T 15-10-2018 IPR036452 Ribonucleoside hydrolase-like AM378_15975 8a04fc302e1ce58c16208cdfd4698b17 476 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 154 231 2.2E-17 T 15-10-2018 IPR000032 Phosphocarrier protein HPr-like AM378_15975 8a04fc302e1ce58c16208cdfd4698b17 476 Gene3D G3DSA:3.30.1340.10 153 239 3.2E-24 T 15-10-2018 IPR035895 HPr-like superfamily AM378_15975 8a04fc302e1ce58c16208cdfd4698b17 476 SUPERFAMILY SSF53062 1 129 2.88E-32 T 15-10-2018 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily GO:0009401|GO:0016021 AM378_15975 8a04fc302e1ce58c16208cdfd4698b17 476 PRINTS PR00107 Phosphocarrier protein signature 189 204 3.2E-8 T 15-10-2018 IPR000032 Phosphocarrier protein HPr-like AM378_15975 8a04fc302e1ce58c16208cdfd4698b17 476 PRINTS PR00107 Phosphocarrier protein signature 164 180 3.2E-8 T 15-10-2018 IPR000032 Phosphocarrier protein HPr-like AM378_15975 8a04fc302e1ce58c16208cdfd4698b17 476 PRINTS PR00107 Phosphocarrier protein signature 204 221 3.2E-8 T 15-10-2018 IPR000032 Phosphocarrier protein HPr-like AM378_15975 8a04fc302e1ce58c16208cdfd4698b17 476 TIGRFAM TIGR02364 dha_pts: dihydroxyacetone kinase, phosphotransfer subunit 2 126 1.8E-37 T 15-10-2018 IPR012844 Dihydroxyacetone kinase phosphotransferase subunit, N-terminal domain AM378_15975 8a04fc302e1ce58c16208cdfd4698b17 476 SUPERFAMILY SSF55594 154 238 9.81E-22 T 15-10-2018 IPR035895 HPr-like superfamily AM378_15975 8a04fc302e1ce58c16208cdfd4698b17 476 Gene3D G3DSA:3.50.30.10 250 472 3.7E-59 T 15-10-2018 AM378_15975 8a04fc302e1ce58c16208cdfd4698b17 476 Pfam PF05524 PEP-utilising enzyme, N-terminal 249 372 5.3E-28 T 15-10-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 AM378_15975 8a04fc302e1ce58c16208cdfd4698b17 476 Gene3D G3DSA:1.10.274.10 267 392 3.7E-59 T 15-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 AM378_15975 8a04fc302e1ce58c16208cdfd4698b17 476 Pfam PF03610 PTS system fructose IIA component 4 120 2.1E-25 T 15-10-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 AM378_15975 8a04fc302e1ce58c16208cdfd4698b17 476 Pfam PF00391 PEP-utilising enzyme, mobile domain 398 470 5.0E-16 T 15-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 AM378_15975 8a04fc302e1ce58c16208cdfd4698b17 476 Gene3D G3DSA:3.40.50.510 1 132 3.5E-43 T 15-10-2018 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily GO:0009401|GO:0016021 AM378_15975 8a04fc302e1ce58c16208cdfd4698b17 476 SUPERFAMILY SSF47831 274 389 6.54E-30 T 15-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 AM378_15975 8a04fc302e1ce58c16208cdfd4698b17 476 SUPERFAMILY SSF52009 361 474 2.49E-24 T 15-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 AM378_15975 8a04fc302e1ce58c16208cdfd4698b17 476 Pfam PF00381 PTS HPr component phosphorylation site 154 233 9.5E-21 T 15-10-2018 IPR000032 Phosphocarrier protein HPr-like AM378_15975 8a04fc302e1ce58c16208cdfd4698b17 476 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 164 171 - T 15-10-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site AM378_18410 1ae5566937d44fe6e0dcc66bda3cb011 164 SUPERFAMILY SSF56524 37 162 1.7E-20 T 15-10-2018 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily GO:0042128 Reactome: R-HSA-1614517 AM378_18410 1ae5566937d44fe6e0dcc66bda3cb011 164 Pfam PF00174 Oxidoreductase molybdopterin binding domain 64 139 1.2E-8 T 15-10-2018 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 AM378_18410 1ae5566937d44fe6e0dcc66bda3cb011 164 Gene3D G3DSA:3.90.420.10 21 142 4.7E-7 T 15-10-2018 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily GO:0042128 Reactome: R-HSA-1614517 AM378_23610 40c703139d89cbb6d19169911e85b5a7 298 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 33 289 5.9E-17 T 15-10-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 AM378_23610 40c703139d89cbb6d19169911e85b5a7 298 Gene3D G3DSA:3.20.20.190 28 298 2.2E-38 T 15-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 AM378_23610 40c703139d89cbb6d19169911e85b5a7 298 SUPERFAMILY SSF51695 27 295 2.51E-50 T 15-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 AM378_04795 20051dbce01cf1da9bc6ed08be9118ba 509 Pfam PF00916 Sulfate permease family 162 352 7.5E-29 T 15-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 AM378_04795 20051dbce01cf1da9bc6ed08be9118ba 509 Gene3D G3DSA:3.30.750.24 384 476 3.6E-25 T 15-10-2018 IPR036513 STAS domain superfamily AM378_04795 20051dbce01cf1da9bc6ed08be9118ba 509 Pfam PF01740 STAS domain 390 479 1.2E-9 T 15-10-2018 IPR002645 STAS domain AM378_04795 20051dbce01cf1da9bc6ed08be9118ba 509 SUPERFAMILY SSF52091 391 474 9.61E-15 T 15-10-2018 IPR036513 STAS domain superfamily AM378_08620 1258b64bc597270d859ab93ebd44e92f 122 Gene3D G3DSA:1.10.3730.20 1 109 1.1E-29 T 15-10-2018 AM378_08620 1258b64bc597270d859ab93ebd44e92f 122 Pfam PF00893 Small Multidrug Resistance protein 3 93 1.1E-23 T 15-10-2018 IPR000390 Small multidrug resistance protein family GO:0016021 AM378_08620 1258b64bc597270d859ab93ebd44e92f 122 Hamap MF_01598 Spermidine export protein MdtJ [mdtJ]. 1 122 31.765 T 15-10-2018 IPR023740 Spermidine export protein MdtJ GO:0005886|GO:0015606|GO:0015848 AM378_08620 1258b64bc597270d859ab93ebd44e92f 122 SUPERFAMILY SSF103481 6 107 1.29E-17 T 15-10-2018 AM378_24075 77ae7157182efe17ca78d275cc3fb2f5 443 Gene3D G3DSA:2.40.50.100 295 331 1.7E-14 T 15-10-2018 AM378_24075 77ae7157182efe17ca78d275cc3fb2f5 443 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 340 364 3.3E-67 T 15-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AM378_24075 77ae7157182efe17ca78d275cc3fb2f5 443 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 364 387 3.3E-67 T 15-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AM378_24075 77ae7157182efe17ca78d275cc3fb2f5 443 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 307 328 3.3E-67 T 15-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AM378_24075 77ae7157182efe17ca78d275cc3fb2f5 443 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 422 442 3.3E-67 T 15-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AM378_24075 77ae7157182efe17ca78d275cc3fb2f5 443 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 32 55 3.3E-67 T 15-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AM378_24075 77ae7157182efe17ca78d275cc3fb2f5 443 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 74 94 3.3E-67 T 15-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AM378_24075 77ae7157182efe17ca78d275cc3fb2f5 443 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 407 422 3.3E-67 T 15-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AM378_24075 77ae7157182efe17ca78d275cc3fb2f5 443 SUPERFAMILY SSF111369 268 329 3.92E-5 T 15-10-2018 AM378_24075 77ae7157182efe17ca78d275cc3fb2f5 443 TIGRFAM TIGR01843 type_I_hlyD: type I secretion membrane fusion protein, HlyD family 22 443 3.9E-124 T 15-10-2018 IPR010129 Type I secretion membrane fusion protein, HlyD family GO:0015031|GO:0016021 AM378_24075 77ae7157182efe17ca78d275cc3fb2f5 443 Pfam PF00529 HlyD membrane-fusion protein of T1SS 34 401 1.6E-19 T 15-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AM378_24075 77ae7157182efe17ca78d275cc3fb2f5 443 ProSitePatterns PS00543 HlyD family secretion proteins signature. 407 429 - T 15-10-2018 IPR006144 Secretion protein HlyD, conserved site GO:0008565|GO:0009306|GO:0016020 AM378_24075 77ae7157182efe17ca78d275cc3fb2f5 443 Gene3D G3DSA:2.40.50.100 65 131 1.7E-7 T 15-10-2018 AM378_24075 77ae7157182efe17ca78d275cc3fb2f5 443 Gene3D G3DSA:2.40.30.170 332 420 1.7E-14 T 15-10-2018 AM378_24075 77ae7157182efe17ca78d275cc3fb2f5 443 Gene3D G3DSA:1.10.287.470 266 294 1.7E-14 T 15-10-2018 AM378_21440 172e06f24311c2e2773afb4314e3dd74 173 Gene3D G3DSA:3.30.1050.10 58 135 8.3E-9 T 15-10-2018 IPR036527 SCP2 sterol-binding domain superfamily AM378_21440 172e06f24311c2e2773afb4314e3dd74 173 SUPERFAMILY SSF55718 42 137 3.73E-22 T 15-10-2018 IPR036527 SCP2 sterol-binding domain superfamily AM378_21440 172e06f24311c2e2773afb4314e3dd74 173 Pfam PF02036 SCP-2 sterol transfer family 43 133 6.8E-19 T 15-10-2018 IPR003033 SCP2 sterol-binding domain AM378_21440 172e06f24311c2e2773afb4314e3dd74 173 PIRSF PIRSF025550 1 173 2.5E-82 T 15-10-2018 IPR016830 Uncharacterised conserved protein UCP025550, lipid carrier protein, YhbT AM378_10715 d904ca4269805d6530ba5829bffae40b 146 Pfam PF04657 Putative inner membrane exporter, YdcZ 3 140 6.3E-19 T 15-10-2018 IPR006750 Putative inner membrane exporter, YdcZ AM378_18620 15b15bad2f607f2a84b68792400f4dca 210 SUPERFAMILY SSF46689 3 77 2.32E-12 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AM378_18620 15b15bad2f607f2a84b68792400f4dca 210 Gene3D G3DSA:1.10.10.60 2 52 1.8E-22 T 15-10-2018 AM378_18620 15b15bad2f607f2a84b68792400f4dca 210 Hamap MF_01190 HTH-type transcriptional repressor FabR [fabR]. 1 209 53.217 T 15-10-2018 IPR023764 Transcriptional repressor HTH, FabR AM378_18620 15b15bad2f607f2a84b68792400f4dca 210 Pfam PF00440 Bacterial regulatory proteins, tetR family 17 58 2.4E-7 T 15-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM378_18620 15b15bad2f607f2a84b68792400f4dca 210 Gene3D G3DSA:1.10.357.10 53 208 3.9E-42 T 15-10-2018 AM378_03455 9608da82bc596891dfb326264e6b3bb0 286 Pfam PF01226 Formate/nitrite transporter 16 276 2.4E-75 T 15-10-2018 IPR000292 Formate/nitrite transporter GO:0016020|GO:0022857|GO:0055085 AM378_03455 9608da82bc596891dfb326264e6b3bb0 286 Gene3D G3DSA:1.20.1080.10 1 268 1.8E-104 T 15-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 AM378_03455 9608da82bc596891dfb326264e6b3bb0 286 ProSitePatterns PS01006 Formate and nitrite transporters signature 2. 168 178 - T 15-10-2018 IPR024002 Formate/nitrite transporter, conserved site AM378_03455 9608da82bc596891dfb326264e6b3bb0 286 TIGRFAM TIGR00790 fnt: formate/nitrite transporter 26 280 4.3E-95 T 15-10-2018 IPR000292 Formate/nitrite transporter GO:0016020|GO:0022857|GO:0055085 AM378_03455 9608da82bc596891dfb326264e6b3bb0 286 TIGRFAM TIGR04060 formate_focA: formate transporter FocA 15 279 1.7E-128 T 15-10-2018 IPR023999 Formate transporter FocA, putative GO:0015499|GO:0015724|GO:0016021 AM378_03455 9608da82bc596891dfb326264e6b3bb0 286 ProSitePatterns PS01005 Formate and nitrite transporters signature 1. 83 92 - T 15-10-2018 IPR024002 Formate/nitrite transporter, conserved site AM378_08500 1238f1e919d9b7396057656571fdcfac 186 Gene3D G3DSA:3.30.420.10 1 178 1.0E-13 T 15-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AM378_08500 1238f1e919d9b7396057656571fdcfac 186 Pfam PF16473 3' exoribonuclease, RNase T-like 3 172 6.4E-48 T 15-10-2018 IPR033390 3'-5' exoribonuclease Rv2179c-like domain AM378_08500 1238f1e919d9b7396057656571fdcfac 186 SUPERFAMILY SSF53098 2 171 3.04E-18 T 15-10-2018 IPR012337 Ribonuclease H-like superfamily AM378_12375 e0e6edf0c29ad22f6da294289f22346f 230 Pfam PF01177 Asp/Glu/Hydantoin racemase 7 224 3.0E-60 T 15-10-2018 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AM378_12375 e0e6edf0c29ad22f6da294289f22346f 230 TIGRFAM TIGR00035 asp_race: aspartate racemase 1 229 2.1E-71 T 15-10-2018 IPR004380 Aspartate racemase GO:0006520|GO:0016855 AM378_12375 e0e6edf0c29ad22f6da294289f22346f 230 SUPERFAMILY SSF53681 118 228 1.37E-32 T 15-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AM378_12375 e0e6edf0c29ad22f6da294289f22346f 230 Gene3D G3DSA:3.40.50.1860 104 215 5.6E-89 T 15-10-2018 AM378_12375 e0e6edf0c29ad22f6da294289f22346f 230 SUPERFAMILY SSF53681 1 114 2.42E-35 T 15-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AM378_12375 e0e6edf0c29ad22f6da294289f22346f 230 Gene3D G3DSA:3.40.50.1860 4 224 5.6E-89 T 15-10-2018 AM378_08535 5942b17ce367d373324f06413766a769 239 Gene3D G3DSA:1.10.10.10 1 79 6.4E-23 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_08535 5942b17ce367d373324f06413766a769 239 Gene3D G3DSA:1.20.120.530 80 239 5.6E-43 T 15-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AM378_08535 5942b17ce367d373324f06413766a769 239 SUPERFAMILY SSF46785 11 87 2.7E-17 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM378_08535 5942b17ce367d373324f06413766a769 239 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 45 61 2.7E-9 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM378_08535 5942b17ce367d373324f06413766a769 239 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 31 45 2.7E-9 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM378_08535 5942b17ce367d373324f06413766a769 239 Hamap MF_00696 Fatty acid metabolism regulator protein [fadR]. 1 239 162.43 T 15-10-2018 IPR014178 Fatty acid response transcription factor FadR GO:0000062|GO:0003677|GO:0003700|GO:0019217 AM378_08535 5942b17ce367d373324f06413766a769 239 TIGRFAM TIGR02812 fadR_gamma: fatty acid metabolism transcriptional regulator FadR 2 236 2.7E-122 T 15-10-2018 IPR014178 Fatty acid response transcription factor FadR GO:0000062|GO:0003677|GO:0003700|GO:0019217 AM378_08535 5942b17ce367d373324f06413766a769 239 Pfam PF00392 Bacterial regulatory proteins, gntR family 11 71 5.3E-20 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM378_08535 5942b17ce367d373324f06413766a769 239 SUPERFAMILY SSF48008 79 230 7.46E-64 T 15-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AM378_08535 5942b17ce367d373324f06413766a769 239 Pfam PF07840 FadR C-terminal domain 72 234 3.5E-74 T 15-10-2018 IPR028374 FadR, C-terminal domain GO:0000062|GO:0019217 AM378_08535 5942b17ce367d373324f06413766a769 239 SMART SM00345 12 71 1.0E-22 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM378_05550 81fdc8f063c4f8e41b686479e4a33d16 183 Gene3D G3DSA:3.40.30.10 1 183 4.8E-63 T 15-10-2018 AM378_05550 81fdc8f063c4f8e41b686479e4a33d16 183 Pfam PF00255 Glutathione peroxidase 11 111 1.4E-37 T 15-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 AM378_05550 81fdc8f063c4f8e41b686479e4a33d16 183 PIRSF PIRSF000303 1 183 8.4E-60 T 15-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 AM378_05550 81fdc8f063c4f8e41b686479e4a33d16 183 ProSitePatterns PS00460 Glutathione peroxidases active site. 25 40 - T 15-10-2018 IPR029759 Glutathione peroxidase active site Reactome: R-HSA-3299685 AM378_05550 81fdc8f063c4f8e41b686479e4a33d16 183 Hamap MF_02061 Thioredoxin/glutathione peroxidase BtuE [btuE]. 3 182 48.333 T 15-10-2018 IPR033674 Thioredoxin/glutathione peroxidase BtuE KEGG: 00480+1.11.1.15+1.11.1.9|KEGG: 00590+1.11.1.9|MetaCyc: PWY-4081 AM378_05550 81fdc8f063c4f8e41b686479e4a33d16 183 SUPERFAMILY SSF52833 4 181 2.66E-54 T 15-10-2018 IPR036249 Thioredoxin-like superfamily AM378_05550 81fdc8f063c4f8e41b686479e4a33d16 183 PRINTS PR01011 Glutathione peroxidase family signature 58 74 2.4E-18 T 15-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 AM378_05550 81fdc8f063c4f8e41b686479e4a33d16 183 PRINTS PR01011 Glutathione peroxidase family signature 143 152 2.4E-18 T 15-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 AM378_05550 81fdc8f063c4f8e41b686479e4a33d16 183 PRINTS PR01011 Glutathione peroxidase family signature 23 40 2.4E-18 T 15-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 AM378_02510 b8fe406607647c7dfebb304e5639e3d9 156 SMART SM01116 83 156 3.6E-46 T 15-10-2018 IPR003712 Cyanate lyase, C-terminal GO:0009439 KEGG: 00910+4.2.1.104 AM378_02510 b8fe406607647c7dfebb304e5639e3d9 156 Gene3D G3DSA:3.30.1160.10 89 156 1.5E-33 T 15-10-2018 IPR036581 Cyanate lyase, C-terminal domain superfamily GO:0009439 KEGG: 00910+4.2.1.104 AM378_02510 b8fe406607647c7dfebb304e5639e3d9 156 Gene3D G3DSA:1.10.260.40 1 88 5.5E-30 T 15-10-2018 AM378_02510 b8fe406607647c7dfebb304e5639e3d9 156 SUPERFAMILY SSF55234 88 155 7.85E-29 T 15-10-2018 IPR036581 Cyanate lyase, C-terminal domain superfamily GO:0009439 KEGG: 00910+4.2.1.104 AM378_02510 b8fe406607647c7dfebb304e5639e3d9 156 PIRSF PIRSF001263 3 156 8.5E-62 T 15-10-2018 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00910+4.2.1.104 AM378_02510 b8fe406607647c7dfebb304e5639e3d9 156 PRINTS PR01693 Cyanase signature 22 37 4.3E-32 T 15-10-2018 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00910+4.2.1.104 AM378_02510 b8fe406607647c7dfebb304e5639e3d9 156 PRINTS PR01693 Cyanase signature 91 105 4.3E-32 T 15-10-2018 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00910+4.2.1.104 AM378_02510 b8fe406607647c7dfebb304e5639e3d9 156 PRINTS PR01693 Cyanase signature 141 151 4.3E-32 T 15-10-2018 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00910+4.2.1.104 AM378_02510 b8fe406607647c7dfebb304e5639e3d9 156 PRINTS PR01693 Cyanase signature 109 125 4.3E-32 T 15-10-2018 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00910+4.2.1.104 AM378_02510 b8fe406607647c7dfebb304e5639e3d9 156 PRINTS PR01693 Cyanase signature 42 59 4.3E-32 T 15-10-2018 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00910+4.2.1.104 AM378_02510 b8fe406607647c7dfebb304e5639e3d9 156 Hamap MF_00535 Cyanate hydratase [cynS]. 1 156 77.526 T 15-10-2018 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00910+4.2.1.104 AM378_02510 b8fe406607647c7dfebb304e5639e3d9 156 TIGRFAM TIGR00673 cynS: cyanase 13 156 1.9E-59 T 15-10-2018 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00910+4.2.1.104 AM378_02510 b8fe406607647c7dfebb304e5639e3d9 156 SUPERFAMILY SSF47413 3 85 2.28E-19 T 15-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AM378_02510 b8fe406607647c7dfebb304e5639e3d9 156 Pfam PF02560 Cyanate lyase C-terminal domain 88 154 1.9E-31 T 15-10-2018 IPR003712 Cyanate lyase, C-terminal GO:0009439 KEGG: 00910+4.2.1.104 AM378_13315 9843a1b37ff167e5a511f4369e9010b1 393 Pfam PF13360 PQQ-like domain 79 320 7.0E-54 T 15-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat AM378_13315 9843a1b37ff167e5a511f4369e9010b1 393 Gene3D G3DSA:2.130.10.10 21 392 8.7E-100 T 15-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 AM378_13315 9843a1b37ff167e5a511f4369e9010b1 393 SUPERFAMILY SSF50998 24 384 1.46E-80 T 15-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily AM378_13315 9843a1b37ff167e5a511f4369e9010b1 393 SMART SM00564 65 96 2.0 T 15-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AM378_13315 9843a1b37ff167e5a511f4369e9010b1 393 SMART SM00564 290 321 300.0 T 15-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AM378_13315 9843a1b37ff167e5a511f4369e9010b1 393 SMART SM00564 201 232 61.0 T 15-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AM378_13315 9843a1b37ff167e5a511f4369e9010b1 393 SMART SM00564 156 187 6.4E-5 T 15-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AM378_13315 9843a1b37ff167e5a511f4369e9010b1 393 SMART SM00564 330 362 2.1 T 15-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AM378_13315 9843a1b37ff167e5a511f4369e9010b1 393 SMART SM00564 116 147 2.0E-4 T 15-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AM378_13315 9843a1b37ff167e5a511f4369e9010b1 393 SMART SM00564 252 283 4.3E-4 T 15-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AM378_13315 9843a1b37ff167e5a511f4369e9010b1 393 TIGRFAM TIGR03300 assembly_YfgL: outer membrane assembly lipoprotein YfgL 6 392 1.0E-134 T 15-10-2018 IPR017687 Outer membrane protein assembly factor BamB AM378_13315 9843a1b37ff167e5a511f4369e9010b1 393 Hamap MF_00923 Outer membrane protein assembly factor BamB [bamB]. 2 393 40.481 T 15-10-2018 IPR017687 Outer membrane protein assembly factor BamB AM378_08575 9570b6978b6e4fce1635f01dd7c9bc72 270 PIRSF PIRSF003092 1 270 2.1E-99 T 15-10-2018 IPR025501 ATP binding protein MinD AM378_08575 9570b6978b6e4fce1635f01dd7c9bc72 270 TIGRFAM TIGR01968 minD_bact: septum site-determining protein MinD 2 268 1.6E-111 T 15-10-2018 IPR010223 ATP binding protein MinD, bacterial-type GO:0016887 AM378_08575 9570b6978b6e4fce1635f01dd7c9bc72 270 SUPERFAMILY SSF52540 1 268 7.41E-55 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_08575 9570b6978b6e4fce1635f01dd7c9bc72 270 Gene3D G3DSA:3.40.50.300 1 260 1.5E-76 T 15-10-2018 AM378_08575 9570b6978b6e4fce1635f01dd7c9bc72 270 Pfam PF13614 AAA domain 3 160 1.2E-20 T 15-10-2018 IPR025669 AAA domain AM378_23585 b3cc03256fe3bfbcc5e8484b2b914d8b 343 SUPERFAMILY SSF143631 29 339 3.66E-103 T 15-10-2018 IPR003374 ApbE-like superfamily AM378_23585 b3cc03256fe3bfbcc5e8484b2b914d8b 343 PIRSF PIRSF006268 5 341 1.6E-91 T 15-10-2018 IPR024932 Flavin transferase ApbE GO:0017013 AM378_23585 b3cc03256fe3bfbcc5e8484b2b914d8b 343 Gene3D G3DSA:3.10.520.20 21 343 6.7E-115 T 15-10-2018 AM378_23585 b3cc03256fe3bfbcc5e8484b2b914d8b 343 Pfam PF02424 ApbE family 36 312 8.3E-86 T 15-10-2018 IPR024932 Flavin transferase ApbE GO:0017013 AM378_07130 685744e3de7224b3ed620dc11eb1dc25 380 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 35 367 6.2E-81 T 15-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AM378_07130 685744e3de7224b3ed620dc11eb1dc25 380 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 54 285 1.2E-14 T 15-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AM378_07130 685744e3de7224b3ed620dc11eb1dc25 380 Gene3D G3DSA:2.40.50.100 59 203 3.3E-104 T 15-10-2018 AM378_07130 685744e3de7224b3ed620dc11eb1dc25 380 Gene3D G3DSA:2.40.420.20 296 365 3.3E-104 T 15-10-2018 AM378_07130 685744e3de7224b3ed620dc11eb1dc25 380 SUPERFAMILY SSF111369 47 292 1.7E-79 T 15-10-2018 AM378_07130 685744e3de7224b3ed620dc11eb1dc25 380 Gene3D G3DSA:2.40.30.170 45 295 3.3E-104 T 15-10-2018 AM378_07130 685744e3de7224b3ed620dc11eb1dc25 380 Gene3D G3DSA:1.10.287.470 94 167 3.3E-104 T 15-10-2018 AM378_00495 92c079856cf20d24ea93beef7542529c 223 Gene3D G3DSA:3.40.50.1110 38 223 1.5E-70 T 15-10-2018 IPR036514 SGNH hydrolase superfamily AM378_00495 92c079856cf20d24ea93beef7542529c 223 ProSitePatterns PS01098 Lipolytic enzymes "G-D-S-L" family, serine active site. 41 51 - T 15-10-2018 IPR008265 Lipase, GDSL, active site GO:0006629|GO:0016298 Reactome: R-HSA-1482788|Reactome: R-HSA-975634 AM378_00495 92c079856cf20d24ea93beef7542529c 223 SUPERFAMILY SSF52266 40 217 2.4E-49 T 15-10-2018 AM378_00495 92c079856cf20d24ea93beef7542529c 223 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 44 201 2.5E-24 T 15-10-2018 IPR013830 SGNH hydrolase-type esterase domain AM378_20425 35d62f9a29606a2e1690ebed00d51008 260 SUPERFAMILY SSF52799 13 259 1.0E-52 T 15-10-2018 IPR029021 Protein-tyrosine phosphatase-like AM378_20425 35d62f9a29606a2e1690ebed00d51008 260 Gene3D G3DSA:3.90.190.10 13 259 6.0E-57 T 15-10-2018 IPR029021 Protein-tyrosine phosphatase-like AM378_20425 35d62f9a29606a2e1690ebed00d51008 260 Pfam PF13350 Tyrosine phosphatase family 13 260 8.3E-61 T 15-10-2018 IPR026893 Tyrosine/serine-protein phosphatase IphP-type AM378_00055 03fdf46ea830f4b488c080deb2668e22 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 15-10-2018 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 AM378_00055 03fdf46ea830f4b488c080deb2668e22 112 SUPERFAMILY SSF54913 1 112 1.94E-42 T 15-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta AM378_00055 03fdf46ea830f4b488c080deb2668e22 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 15-10-2018 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 AM378_00055 03fdf46ea830f4b488c080deb2668e22 112 SMART SM00938 4 105 1.6E-61 T 15-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AM378_00055 03fdf46ea830f4b488c080deb2668e22 112 PIRSF PIRSF039144 1 112 2.4E-53 T 15-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AM378_00055 03fdf46ea830f4b488c080deb2668e22 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 1.4E-41 T 15-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AM378_00055 03fdf46ea830f4b488c080deb2668e22 112 Gene3D G3DSA:3.30.70.120 1 112 7.9E-45 T 15-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal AM378_00055 03fdf46ea830f4b488c080deb2668e22 112 PRINTS PR00340 P-II protein signature 83 103 5.2E-41 T 15-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AM378_00055 03fdf46ea830f4b488c080deb2668e22 112 PRINTS PR00340 P-II protein signature 2 17 5.2E-41 T 15-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AM378_00055 03fdf46ea830f4b488c080deb2668e22 112 PRINTS PR00340 P-II protein signature 52 75 5.2E-41 T 15-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AM378_00055 03fdf46ea830f4b488c080deb2668e22 112 PRINTS PR00340 P-II protein signature 23 41 5.2E-41 T 15-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AM378_06995 a50ca6768c9ce6676f2bb025af8f7f82 391 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 155 278 7.9E-20 T 15-10-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 AM378_06995 a50ca6768c9ce6676f2bb025af8f7f82 391 SUPERFAMILY SSF51735 8 174 4.63E-41 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily AM378_06995 a50ca6768c9ce6676f2bb025af8f7f82 391 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 12 143 1.8E-28 T 15-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 AM378_06995 a50ca6768c9ce6676f2bb025af8f7f82 391 Gene3D G3DSA:3.40.50.720 17 363 2.6E-112 T 15-10-2018 AM378_06995 a50ca6768c9ce6676f2bb025af8f7f82 391 Gene3D G3DSA:3.30.360.10 148 388 2.6E-112 T 15-10-2018 AM378_06995 a50ca6768c9ce6676f2bb025af8f7f82 391 SUPERFAMILY SSF55347 148 327 2.13E-27 T 15-10-2018 AM378_16365 bc37453d2096c1fbe06acbb8af20e766 379 Pfam PF05175 Methyltransferase small domain 201 371 7.8E-56 T 15-10-2018 IPR007848 Methyltransferase small domain GO:0008168 AM378_16365 bc37453d2096c1fbe06acbb8af20e766 379 SUPERFAMILY SSF53335 192 374 2.39E-25 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM378_16365 bc37453d2096c1fbe06acbb8af20e766 379 Gene3D G3DSA:3.40.50.150 186 378 5.5E-54 T 15-10-2018 AM378_16365 bc37453d2096c1fbe06acbb8af20e766 379 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 303 309 - T 15-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 AM378_16365 bc37453d2096c1fbe06acbb8af20e766 379 PIRSF PIRSF037565 1 375 5.0E-169 T 15-10-2018 IPR017237 rRNA (guanine-N2-)-methyltransferase, RsmD GO:0005737|GO:0008990|GO:0031167 AM378_16365 bc37453d2096c1fbe06acbb8af20e766 379 Gene3D G3DSA:3.40.50.150 8 182 3.8E-59 T 15-10-2018 AM378_16365 bc37453d2096c1fbe06acbb8af20e766 379 Hamap MF_01859 Ribosomal RNA large subunit methyltransferase G [rlmG]. 1 374 51.479 T 15-10-2018 IPR017237 rRNA (guanine-N2-)-methyltransferase, RsmD GO:0005737|GO:0008990|GO:0031167 AM378_06970 a738a85e77919df93f5b49df085fa90e 286 Gene3D G3DSA:3.40.50.720 1 276 9.8E-79 T 15-10-2018 AM378_06970 a738a85e77919df93f5b49df085fa90e 286 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 148 167 2.3E-8 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_06970 a738a85e77919df93f5b49df085fa90e 286 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 128 136 2.3E-8 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_06970 a738a85e77919df93f5b49df085fa90e 286 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 75 86 2.3E-8 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_06970 a738a85e77919df93f5b49df085fa90e 286 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 135 163 - T 15-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AM378_06970 a738a85e77919df93f5b49df085fa90e 286 SUPERFAMILY SSF51735 2 237 3.9E-64 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily AM378_06970 a738a85e77919df93f5b49df085fa90e 286 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 122 138 1.4E-21 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_06970 a738a85e77919df93f5b49df085fa90e 286 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 169 186 1.4E-21 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_06970 a738a85e77919df93f5b49df085fa90e 286 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 1.4E-21 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_06970 a738a85e77919df93f5b49df085fa90e 286 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 75 86 1.4E-21 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_06970 a738a85e77919df93f5b49df085fa90e 286 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 148 167 1.4E-21 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_06970 a738a85e77919df93f5b49df085fa90e 286 Pfam PF00106 short chain dehydrogenase 4 189 2.7E-49 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_06970 a738a85e77919df93f5b49df085fa90e 286 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 3 179 1.2E-4 T 15-10-2018 AM378_21250 2e81ddb9a1c272d5e9610f9fdd5123c8 118 Gene3D G3DSA:1.10.10.10 2 73 1.9E-25 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_21250 2e81ddb9a1c272d5e9610f9fdd5123c8 118 SUPERFAMILY SSF46955 3 71 3.3E-22 T 15-10-2018 IPR009061 Putative DNA-binding domain superfamily AM378_21250 2e81ddb9a1c272d5e9610f9fdd5123c8 118 Pfam PF02316 Mu DNA-binding domain 9 99 1.2E-13 T 15-10-2018 IPR003314 Mu-type HTH domain GO:0003677 AM378_21250 2e81ddb9a1c272d5e9610f9fdd5123c8 118 ProDom PD060594 TRANSCRIPTION YFED YFEC DNA-BINDING REGULATION NEGATIVE REGULATOR STY2653 ECS3274 STY2652 6 112 7.0E-5 T 15-10-2018 IPR010749 Protein of unknown function DUF1323 AM378_16320 778f281365402f5a9fe8867f0b9c0106 146 PIRSF PIRSF000452 1 146 3.1E-51 T 15-10-2018 IPR024170 Aminoglycoside N6-acetyltransferase AM378_16320 778f281365402f5a9fe8867f0b9c0106 146 Pfam PF00583 Acetyltransferase (GNAT) family 13 132 7.0E-15 T 15-10-2018 IPR000182 GNAT domain AM378_16320 778f281365402f5a9fe8867f0b9c0106 146 SUPERFAMILY SSF55729 2 142 6.18E-30 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase AM378_16320 778f281365402f5a9fe8867f0b9c0106 146 Gene3D G3DSA:3.40.630.30 2 145 1.1E-36 T 15-10-2018 AM378_15125 41550c5394776cf419e520684c5be467 431 Gene3D G3DSA:1.20.1250.20 11 212 6.4E-47 T 15-10-2018 AM378_15125 41550c5394776cf419e520684c5be467 431 PIRSF PIRSF002808 1 430 3.3E-35 T 15-10-2018 IPR000849 Sugar phosphate transporter GO:0016021|GO:0022857|GO:0055085 AM378_15125 41550c5394776cf419e520684c5be467 431 SUPERFAMILY SSF103473 13 421 6.28E-91 T 15-10-2018 IPR036259 MFS transporter superfamily AM378_15125 41550c5394776cf419e520684c5be467 431 Gene3D G3DSA:1.20.1250.20 230 426 4.7E-35 T 15-10-2018 AM378_15125 41550c5394776cf419e520684c5be467 431 Pfam PF07690 Major Facilitator Superfamily 26 387 5.2E-59 T 15-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM378_03280 29f4fc6f5ad76a728c8e02d6e88fc4c1 180 Pfam PF12883 Protein of unknown function (DUF3828) 40 162 2.6E-16 T 15-10-2018 IPR024289 Domain of unknown function DUF3828 AM378_00100 4eacec041362ec848b1c200182ff7472 147 Gene3D G3DSA:2.30.30.830 84 145 2.6E-14 T 15-10-2018 AM378_00100 4eacec041362ec848b1c200182ff7472 147 Pfam PF11356 Type II secretion system protein C 3 145 5.7E-15 T 15-10-2018 IPR024961 Type II secretion system protein C, N-terminal AM378_15035 ed90112caade541e5f5a1ad829831937 392 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 293 309 1.6E-13 T 15-10-2018 AM378_15035 ed90112caade541e5f5a1ad829831937 392 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 154 169 1.6E-13 T 15-10-2018 AM378_15035 ed90112caade541e5f5a1ad829831937 392 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 278 293 1.6E-13 T 15-10-2018 AM378_15035 ed90112caade541e5f5a1ad829831937 392 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 2 24 1.6E-13 T 15-10-2018 AM378_15035 ed90112caade541e5f5a1ad829831937 392 Gene3D G3DSA:3.50.50.60 3 336 2.9E-94 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AM378_15035 ed90112caade541e5f5a1ad829831937 392 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 292 305 - T 15-10-2018 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 Reactome: R-HSA-2142789 AM378_15035 ed90112caade541e5f5a1ad829831937 392 Gene3D G3DSA:3.30.9.50 78 267 2.9E-94 T 15-10-2018 AM378_15035 ed90112caade541e5f5a1ad829831937 392 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 3 388 2.4E-131 T 15-10-2018 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 AM378_15035 ed90112caade541e5f5a1ad829831937 392 SUPERFAMILY SSF51905 2 382 4.85E-53 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AM378_15035 ed90112caade541e5f5a1ad829831937 392 TIGRFAM TIGR01984 UbiH: 2-polyprenyl-6-methoxyphenol 4-hydroxylase 3 388 4.0E-144 T 15-10-2018 IPR011295 2-polyprenyl-6-methoxyphenol 4-hydroxylase GO:0006744|GO:0008681 AM378_15035 ed90112caade541e5f5a1ad829831937 392 Pfam PF01494 FAD binding domain 2 343 3.0E-24 T 15-10-2018 IPR002938 FAD-binding domain GO:0071949 AM378_07825 a25f3182fc441bf1f60bb55af53a6870 389 Gene3D G3DSA:3.40.710.10 17 281 4.5E-89 T 15-10-2018 AM378_07825 a25f3182fc441bf1f60bb55af53a6870 389 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 30 263 6.8E-92 T 15-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 AM378_07825 a25f3182fc441bf1f60bb55af53a6870 389 SMART SM00936 283 374 4.8E-29 T 15-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AM378_07825 a25f3182fc441bf1f60bb55af53a6870 389 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 149 162 9.7E-17 T 15-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 AM378_07825 a25f3182fc441bf1f60bb55af53a6870 389 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 63 74 9.7E-17 T 15-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 AM378_07825 a25f3182fc441bf1f60bb55af53a6870 389 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 122 139 9.7E-17 T 15-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 AM378_07825 a25f3182fc441bf1f60bb55af53a6870 389 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 283 373 5.5E-20 T 15-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AM378_07825 a25f3182fc441bf1f60bb55af53a6870 389 Gene3D G3DSA:2.60.410.10 283 374 1.8E-24 T 15-10-2018 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AM378_07825 a25f3182fc441bf1f60bb55af53a6870 389 SUPERFAMILY SSF56601 13 283 2.18E-75 T 15-10-2018 IPR012338 Beta-lactamase/transpeptidase-like AM378_07825 a25f3182fc441bf1f60bb55af53a6870 389 SUPERFAMILY SSF69189 283 376 8.83E-22 T 15-10-2018 IPR015956 Penicillin-binding protein, C-terminal domain superfamily GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AM378_05245 c933894f95da3d34186f2116c1275d4a 419 Gene3D G3DSA:1.20.1250.20 201 400 1.8E-62 T 15-10-2018 AM378_05245 c933894f95da3d34186f2116c1275d4a 419 TIGRFAM TIGR00882 2A0105: oligosaccharide:H+ symporter 7 397 2.2E-136 T 15-10-2018 IPR000576 LacY/RafB permease family GO:0005351|GO:0008643|GO:0016020 AM378_05245 c933894f95da3d34186f2116c1275d4a 419 PRINTS PR00174 LacY proton/sugar symporter family signature 343 363 1.4E-78 T 15-10-2018 IPR000576 LacY/RafB permease family GO:0005351|GO:0008643|GO:0016020 AM378_05245 c933894f95da3d34186f2116c1275d4a 419 PRINTS PR00174 LacY proton/sugar symporter family signature 212 240 1.4E-78 T 15-10-2018 IPR000576 LacY/RafB permease family GO:0005351|GO:0008643|GO:0016020 AM378_05245 c933894f95da3d34186f2116c1275d4a 419 PRINTS PR00174 LacY proton/sugar symporter family signature 281 307 1.4E-78 T 15-10-2018 IPR000576 LacY/RafB permease family GO:0005351|GO:0008643|GO:0016020 AM378_05245 c933894f95da3d34186f2116c1275d4a 419 PRINTS PR00174 LacY proton/sugar symporter family signature 68 97 1.4E-78 T 15-10-2018 IPR000576 LacY/RafB permease family GO:0005351|GO:0008643|GO:0016020 AM378_05245 c933894f95da3d34186f2116c1275d4a 419 PRINTS PR00174 LacY proton/sugar symporter family signature 145 163 1.4E-78 T 15-10-2018 IPR000576 LacY/RafB permease family GO:0005351|GO:0008643|GO:0016020 AM378_05245 c933894f95da3d34186f2116c1275d4a 419 PRINTS PR00174 LacY proton/sugar symporter family signature 312 331 1.4E-78 T 15-10-2018 IPR000576 LacY/RafB permease family GO:0005351|GO:0008643|GO:0016020 AM378_05245 c933894f95da3d34186f2116c1275d4a 419 PRINTS PR00174 LacY proton/sugar symporter family signature 257 278 1.4E-78 T 15-10-2018 IPR000576 LacY/RafB permease family GO:0005351|GO:0008643|GO:0016020 AM378_05245 c933894f95da3d34186f2116c1275d4a 419 PRINTS PR00174 LacY proton/sugar symporter family signature 103 125 1.4E-78 T 15-10-2018 IPR000576 LacY/RafB permease family GO:0005351|GO:0008643|GO:0016020 AM378_05245 c933894f95da3d34186f2116c1275d4a 419 Pfam PF01306 LacY proton/sugar symporter 5 403 5.4E-137 T 15-10-2018 IPR000576 LacY/RafB permease family GO:0005351|GO:0008643|GO:0016020 AM378_05245 c933894f95da3d34186f2116c1275d4a 419 Gene3D G3DSA:1.20.1250.20 5 195 4.0E-37 T 15-10-2018 AM378_05245 c933894f95da3d34186f2116c1275d4a 419 SUPERFAMILY SSF103473 1 402 5.62E-37 T 15-10-2018 IPR036259 MFS transporter superfamily AM378_14415 3360d7d6434d2c6ebd24186dfe7bfe73 401 TIGRFAM TIGR03392 FeS_syn_CsdA: cysteine desulfurase, catalytic subunit CsdA 4 401 7.9E-223 T 15-10-2018 IPR022471 Cysteine desulphurase, catalytic subunit, CsdA GO:0016226|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 AM378_14415 3360d7d6434d2c6ebd24186dfe7bfe73 401 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 213 232 - T 15-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site AM378_14415 3360d7d6434d2c6ebd24186dfe7bfe73 401 Pfam PF00266 Aminotransferase class-V 21 388 5.7E-139 T 15-10-2018 IPR000192 Aminotransferase class V domain AM378_14415 3360d7d6434d2c6ebd24186dfe7bfe73 401 Gene3D G3DSA:3.40.640.10 34 292 4.3E-149 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AM378_14415 3360d7d6434d2c6ebd24186dfe7bfe73 401 Gene3D G3DSA:3.90.1150.10 21 389 4.3E-149 T 15-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AM378_14415 3360d7d6434d2c6ebd24186dfe7bfe73 401 SUPERFAMILY SSF53383 5 396 1.99E-113 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM378_12845 11027d2e5ccb00871cf467e9bb416b3d 293 Gene3D G3DSA:3.20.20.70 1 293 3.9E-112 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM378_12845 11027d2e5ccb00871cf467e9bb416b3d 293 Pfam PF00701 Dihydrodipicolinate synthetase family 2 289 5.2E-114 T 15-10-2018 IPR002220 DapA-like GO:0016829 AM378_12845 11027d2e5ccb00871cf467e9bb416b3d 293 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 1 289 65.663 T 15-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AM378_12845 11027d2e5ccb00871cf467e9bb416b3d 293 PRINTS PR00146 Dihydrodipicolinate synthase signature 103 119 2.3E-34 T 15-10-2018 IPR002220 DapA-like GO:0016829 AM378_12845 11027d2e5ccb00871cf467e9bb416b3d 293 PRINTS PR00146 Dihydrodipicolinate synthase signature 71 89 2.3E-34 T 15-10-2018 IPR002220 DapA-like GO:0016829 AM378_12845 11027d2e5ccb00871cf467e9bb416b3d 293 PRINTS PR00146 Dihydrodipicolinate synthase signature 35 56 2.3E-34 T 15-10-2018 IPR002220 DapA-like GO:0016829 AM378_12845 11027d2e5ccb00871cf467e9bb416b3d 293 PRINTS PR00146 Dihydrodipicolinate synthase signature 128 145 2.3E-34 T 15-10-2018 IPR002220 DapA-like GO:0016829 AM378_12845 11027d2e5ccb00871cf467e9bb416b3d 293 SUPERFAMILY SSF51569 1 293 8.06E-98 T 15-10-2018 AM378_12845 11027d2e5ccb00871cf467e9bb416b3d 293 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 4 289 1.2E-119 T 15-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AM378_12845 11027d2e5ccb00871cf467e9bb416b3d 293 SMART SM01130 1 291 8.4E-142 T 15-10-2018 IPR002220 DapA-like GO:0016829 AM378_12845 11027d2e5ccb00871cf467e9bb416b3d 293 PIRSF PIRSF001365 1 293 2.1E-92 T 15-10-2018 IPR002220 DapA-like GO:0016829 AM378_12845 11027d2e5ccb00871cf467e9bb416b3d 293 ProSitePatterns PS00665 Dihydrodipicolinate synthase signature 1. 38 55 - T 15-10-2018 IPR020624 Schiff base-forming aldolase, conserved site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AM378_12845 11027d2e5ccb00871cf467e9bb416b3d 293 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 133 163 - T 15-10-2018 IPR020625 Schiff base-forming aldolase, active site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|Reactome: R-HSA-389661 AM378_11280 7192f7eea41b831ff7cc541973220adc 503 Gene3D G3DSA:3.40.50.300 265 498 2.6E-37 T 15-10-2018 AM378_11280 7192f7eea41b831ff7cc541973220adc 503 SMART SM00382 284 480 6.3E-4 T 15-10-2018 IPR003593 AAA+ ATPase domain AM378_11280 7192f7eea41b831ff7cc541973220adc 503 SMART SM00382 33 231 3.2E-9 T 15-10-2018 IPR003593 AAA+ ATPase domain AM378_11280 7192f7eea41b831ff7cc541973220adc 503 SUPERFAMILY SSF52540 261 490 1.92E-38 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_11280 7192f7eea41b831ff7cc541973220adc 503 ProSitePatterns PS00211 ABC transporters family signature. 402 416 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM378_11280 7192f7eea41b831ff7cc541973220adc 503 Gene3D G3DSA:3.40.50.300 1 248 1.2E-55 T 15-10-2018 AM378_11280 7192f7eea41b831ff7cc541973220adc 503 SUPERFAMILY SSF52540 9 232 4.85E-54 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_11280 7192f7eea41b831ff7cc541973220adc 503 Pfam PF00005 ABC transporter 275 429 5.3E-17 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM378_11280 7192f7eea41b831ff7cc541973220adc 503 Pfam PF00005 ABC transporter 24 175 3.4E-25 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM378_14630 88821f58599dae412dd9ff620272314f 427 Gene3D G3DSA:3.20.20.70 8 415 2.1E-173 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM378_14630 88821f58599dae412dd9ff620272314f 427 TIGRFAM TIGR02810 agaZ_gatZ: D-tagatose-bisphosphate aldolase, class II, non-catalytic subunit 6 422 4.1E-205 T 15-10-2018 IPR012062 D-tagatose-bisphosphate aldolase, non-catalytic subunit GatZ/KbaZ GO:0019402 AM378_14630 88821f58599dae412dd9ff620272314f 427 SUPERFAMILY SSF51569 5 422 1.3E-166 T 15-10-2018 AM378_14630 88821f58599dae412dd9ff620272314f 427 Gene3D G3DSA:1.10.400.20 286 409 2.1E-173 T 15-10-2018 AM378_14630 88821f58599dae412dd9ff620272314f 427 Pfam PF08013 Tagatose 6 phosphate kinase 4 422 5.7E-199 T 15-10-2018 IPR012062 D-tagatose-bisphosphate aldolase, non-catalytic subunit GatZ/KbaZ GO:0019402 AM378_14630 88821f58599dae412dd9ff620272314f 427 PIRSF PIRSF009264 1 427 2.8E-190 T 15-10-2018 IPR012062 D-tagatose-bisphosphate aldolase, non-catalytic subunit GatZ/KbaZ GO:0019402 AM378_20720 a5c68ed8164338dd40cb124de9108277 90 SMART SM00411 1 90 1.0E-43 T 15-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AM378_20720 a5c68ed8164338dd40cb124de9108277 90 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 2.0E-19 T 15-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AM378_20720 a5c68ed8164338dd40cb124de9108277 90 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 2.0E-19 T 15-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AM378_20720 a5c68ed8164338dd40cb124de9108277 90 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 2.0E-19 T 15-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AM378_20720 a5c68ed8164338dd40cb124de9108277 90 Gene3D G3DSA:4.10.520.10 1 90 7.0E-37 T 15-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 AM378_20720 a5c68ed8164338dd40cb124de9108277 90 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 15-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 AM378_20720 a5c68ed8164338dd40cb124de9108277 90 SUPERFAMILY SSF47729 1 90 1.91E-32 T 15-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 AM378_20720 a5c68ed8164338dd40cb124de9108277 90 Pfam PF00216 Bacterial DNA-binding protein 1 90 2.9E-32 T 15-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AM378_13585 496b4b6e5a1a43aa6f9a5e811d1e29d5 243 Pfam PF02565 Recombination protein O C terminal 85 226 2.1E-23 T 15-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 AM378_13585 496b4b6e5a1a43aa6f9a5e811d1e29d5 243 Hamap MF_00201 DNA repair protein RecO [recO]. 1 231 23.333 T 15-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 AM378_13585 496b4b6e5a1a43aa6f9a5e811d1e29d5 243 Pfam PF11967 Recombination protein O N terminal 5 76 7.3E-23 T 15-10-2018 IPR022572 DNA replication/recombination mediator RecO, N-terminal AM378_13585 496b4b6e5a1a43aa6f9a5e811d1e29d5 243 Gene3D G3DSA:2.40.50.140 1 78 1.1E-33 T 15-10-2018 AM378_13585 496b4b6e5a1a43aa6f9a5e811d1e29d5 243 SUPERFAMILY SSF50249 5 75 9.25E-15 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold AM378_13585 496b4b6e5a1a43aa6f9a5e811d1e29d5 243 SUPERFAMILY SSF57863 85 175 5.49E-10 T 15-10-2018 IPR037278 ARFGAP/RecO-like zinc finger AM378_13585 496b4b6e5a1a43aa6f9a5e811d1e29d5 243 Gene3D G3DSA:1.20.1440.120 79 239 6.7E-56 T 15-10-2018 AM378_13585 496b4b6e5a1a43aa6f9a5e811d1e29d5 243 TIGRFAM TIGR00613 reco: DNA repair protein RecO 6 230 2.5E-37 T 15-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 AM378_19000 6765b9420c44b949dff58a78341d59d6 238 Pfam PF01138 3' exoribonuclease family, domain 1 10 140 8.6E-24 T 15-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 AM378_19000 6765b9420c44b949dff58a78341d59d6 238 Gene3D G3DSA:3.30.230.70 10 238 1.8E-64 T 15-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 AM378_19000 6765b9420c44b949dff58a78341d59d6 238 SUPERFAMILY SSF54211 1 181 1.01E-44 T 15-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AM378_19000 6765b9420c44b949dff58a78341d59d6 238 Pfam PF03725 3' exoribonuclease family, domain 2 157 222 8.6E-11 T 15-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 AM378_19000 6765b9420c44b949dff58a78341d59d6 238 TIGRFAM TIGR01966 RNasePH: ribonuclease PH 2 236 6.7E-112 T 15-10-2018 IPR002381 Ribonuclease PH, bacterial-type GO:0000049|GO:0008033|GO:0009022 AM378_19000 6765b9420c44b949dff58a78341d59d6 238 SUPERFAMILY SSF55666 153 237 7.59E-26 T 15-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 AM378_19000 6765b9420c44b949dff58a78341d59d6 238 Hamap MF_00564 Ribonuclease PH [rph]. 11 237 45.263 T 15-10-2018 IPR002381 Ribonuclease PH, bacterial-type GO:0000049|GO:0008033|GO:0009022 AM378_19000 6765b9420c44b949dff58a78341d59d6 238 ProSitePatterns PS01277 Ribonuclease PH signature. 116 128 - T 15-10-2018 IPR018336 Ribonuclease PH, conserved site AM378_13200 f730cedc9603368ac12d138a46110033 409 Pfam PF07690 Major Facilitator Superfamily 27 283 2.0E-27 T 15-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM378_13200 f730cedc9603368ac12d138a46110033 409 Gene3D G3DSA:1.20.1250.20 19 401 1.0E-40 T 15-10-2018 AM378_13200 f730cedc9603368ac12d138a46110033 409 SUPERFAMILY SSF103473 11 399 8.11E-48 T 15-10-2018 IPR036259 MFS transporter superfamily AM378_16430 54434dbd7ba8903cdedeaa5a4f70c960 123 Pfam PF06476 Protein of unknown function (DUF1090) 15 118 6.1E-38 T 15-10-2018 IPR009468 Protein of unknown function DUF1090 AM378_13545 5fda26e3cb1e0a084cec57802e223361 218 TIGRFAM TIGR01545 YfhB_g-proteo: HAD hydrolase, family IF 10 218 1.8E-120 T 15-10-2018 IPR006435 HAD-superfamily hydrolase, subfamily IF, YfhB KEGG: 00564+3.1.3.27|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 AM378_13545 5fda26e3cb1e0a084cec57802e223361 218 SUPERFAMILY SSF56784 14 139 1.22E-8 T 15-10-2018 IPR036412 HAD-like superfamily AM378_13545 5fda26e3cb1e0a084cec57802e223361 218 Gene3D G3DSA:3.40.50.1000 16 216 6.1E-13 T 15-10-2018 IPR023214 HAD superfamily AM378_13545 5fda26e3cb1e0a084cec57802e223361 218 Pfam PF12710 haloacid dehalogenase-like hydrolase 16 199 1.0E-14 T 15-10-2018 AM378_13545 5fda26e3cb1e0a084cec57802e223361 218 Gene3D G3DSA:1.20.1440.100 27 100 6.1E-13 T 15-10-2018 AM378_12150 bc31f813e0b9efd89ef22ff85cbe623a 721 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 321 499 2.4E-56 T 15-10-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 AM378_12150 bc31f813e0b9efd89ef22ff85cbe623a 721 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 629 714 4.4E-7 T 15-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 AM378_12150 bc31f813e0b9efd89ef22ff85cbe623a 721 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 502 595 7.7E-24 T 15-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 AM378_12150 bc31f813e0b9efd89ef22ff85cbe623a 721 Gene3D G3DSA:1.10.1040.50 505 712 6.0E-70 T 15-10-2018 AM378_12150 bc31f813e0b9efd89ef22ff85cbe623a 721 ProSitePatterns PS00067 3-hydroxyacyl-CoA dehydrogenase signature. 499 524 - T 15-10-2018 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 AM378_12150 bc31f813e0b9efd89ef22ff85cbe623a 721 Pfam PF00378 Enoyl-CoA hydratase/isomerase 24 214 1.4E-41 T 15-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 AM378_12150 bc31f813e0b9efd89ef22ff85cbe623a 721 SUPERFAMILY SSF52096 16 309 2.02E-64 T 15-10-2018 IPR029045 ClpP/crotonase-like domain superfamily AM378_12150 bc31f813e0b9efd89ef22ff85cbe623a 721 Gene3D G3DSA:3.90.226.10 13 314 2.5E-95 T 15-10-2018 AM378_12150 bc31f813e0b9efd89ef22ff85cbe623a 721 Hamap MF_01617 Fatty acid oxidation complex subunit alpha [fadJ]. 11 717 53.373 T 15-10-2018 IPR012802 Fatty oxidation complex, alpha subunit FadJ GO:0003857|GO:0004300|GO:0006635|GO:0008692|GO:0051287 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 AM378_12150 bc31f813e0b9efd89ef22ff85cbe623a 721 TIGRFAM TIGR02440 FadJ: fatty oxidation complex, alpha subunit FadJ 16 717 0.0 T 15-10-2018 IPR012802 Fatty oxidation complex, alpha subunit FadJ GO:0003857|GO:0004300|GO:0006635|GO:0008692|GO:0051287 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 AM378_12150 bc31f813e0b9efd89ef22ff85cbe623a 721 SUPERFAMILY SSF48179 502 604 2.81E-28 T 15-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 AM378_12150 bc31f813e0b9efd89ef22ff85cbe623a 721 SUPERFAMILY SSF48179 625 717 1.45E-26 T 15-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 AM378_12150 bc31f813e0b9efd89ef22ff85cbe623a 721 Gene3D G3DSA:3.40.50.720 319 504 4.6E-60 T 15-10-2018 AM378_12150 bc31f813e0b9efd89ef22ff85cbe623a 721 SUPERFAMILY SSF51735 319 500 5.62E-49 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily AM378_07530 0d568e757a29c12bff7597cc971caede 320 SUPERFAMILY SSF52402 4 155 2.26E-28 T 15-10-2018 AM378_07530 0d568e757a29c12bff7597cc971caede 320 SUPERFAMILY SSF52402 155 306 2.09E-23 T 15-10-2018 AM378_07530 0d568e757a29c12bff7597cc971caede 320 Gene3D G3DSA:3.40.50.12370 1 315 6.9E-133 T 15-10-2018 AM378_07530 0d568e757a29c12bff7597cc971caede 320 Pfam PF00582 Universal stress protein family 175 300 2.1E-13 T 15-10-2018 IPR006016 UspA AM378_07530 0d568e757a29c12bff7597cc971caede 320 Pfam PF00582 Universal stress protein family 4 146 1.9E-19 T 15-10-2018 IPR006016 UspA AM378_21365 ada6d235fb92c86e97fe337fedbda5ee 89 TIGRFAM TIGR00952 S15_bact: ribosomal protein uS15 6 89 1.8E-39 T 15-10-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM378_21365 ada6d235fb92c86e97fe337fedbda5ee 89 Gene3D G3DSA:1.10.287.10 2 89 3.1E-37 T 15-10-2018 AM378_21365 ada6d235fb92c86e97fe337fedbda5ee 89 Pfam PF00312 Ribosomal protein S15 8 88 1.4E-37 T 15-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM378_21365 ada6d235fb92c86e97fe337fedbda5ee 89 Hamap MF_01343_B 30S ribosomal protein S15 [rpsO]. 3 89 22.254 T 15-10-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM378_21365 ada6d235fb92c86e97fe337fedbda5ee 89 SMART SM01387 8 88 2.9E-52 T 15-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM378_21365 ada6d235fb92c86e97fe337fedbda5ee 89 ProSitePatterns PS00362 Ribosomal protein S15 signature. 39 69 - T 15-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM378_21365 ada6d235fb92c86e97fe337fedbda5ee 89 ProDom PD157043 RIBOSOMAL S15 RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 30S CHLOROPLAST S15 MITOCHONDRIAL TYPE 10 88 1.0E-38 T 15-10-2018 AM378_21365 ada6d235fb92c86e97fe337fedbda5ee 89 SUPERFAMILY SSF47060 3 89 7.95E-35 T 15-10-2018 IPR009068 S15/NS1, RNA-binding AM378_15430 98d031c0b48a7afefd9350df0ae7802a 126 ProDom PD009294 ASPARTATE 1-DECARBOXYLASE DECARBOXYLASE CHAIN LYASE ALPHA ALPHA- CONTAINS: PRECURSOR BETA 5 123 9.0E-63 T 15-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 AM378_15430 98d031c0b48a7afefd9350df0ae7802a 126 Pfam PF02261 Aspartate decarboxylase 1 114 1.6E-48 T 15-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 AM378_15430 98d031c0b48a7afefd9350df0ae7802a 126 Gene3D G3DSA:2.40.40.20 1 126 7.2E-55 T 15-10-2018 AM378_15430 98d031c0b48a7afefd9350df0ae7802a 126 Hamap MF_00446 Aspartate 1-decarboxylase [panD]. 1 126 71.1 T 15-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 AM378_15430 98d031c0b48a7afefd9350df0ae7802a 126 SUPERFAMILY SSF50692 1 115 1.74E-47 T 15-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily AM378_15430 98d031c0b48a7afefd9350df0ae7802a 126 PIRSF PIRSF006246 1 125 3.9E-54 T 15-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 AM378_15430 98d031c0b48a7afefd9350df0ae7802a 126 TIGRFAM TIGR00223 panD: aspartate 1-decarboxylase 1 126 1.3E-60 T 15-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 AM378_03055 8c179b8e6d3f99c21cce7ce09512c705 221 SMART SM00421 138 195 5.0E-15 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM378_03055 8c179b8e6d3f99c21cce7ce09512c705 221 Gene3D G3DSA:1.10.10.10 106 199 1.1E-15 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_03055 8c179b8e6d3f99c21cce7ce09512c705 221 Pfam PF00196 Bacterial regulatory proteins, luxR family 141 192 9.4E-14 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM378_03055 8c179b8e6d3f99c21cce7ce09512c705 221 SUPERFAMILY SSF46894 136 196 9.18E-16 T 15-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AM378_03055 8c179b8e6d3f99c21cce7ce09512c705 221 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 155 171 1.1E-5 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM378_03055 8c179b8e6d3f99c21cce7ce09512c705 221 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 141 155 1.1E-5 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM378_03055 8c179b8e6d3f99c21cce7ce09512c705 221 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 171 183 1.1E-5 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM378_23200 6391d3d7f6dbc8bbcce02511c80aac98 105 SUPERFAMILY SSF52794 4 103 2.88E-31 T 15-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 AM378_23200 6391d3d7f6dbc8bbcce02511c80aac98 105 Gene3D G3DSA:3.40.50.2300 1 105 1.9E-33 T 15-10-2018 AM378_23200 6391d3d7f6dbc8bbcce02511c80aac98 105 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 5 94 1.4E-16 T 15-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 AM378_12425 a855ce8489f3a2da8e71b8db6cda9c02 226 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 22 139 2.4E-41 T 15-10-2018 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 AM378_12425 a855ce8489f3a2da8e71b8db6cda9c02 226 Gene3D G3DSA:2.60.40.10 143 224 3.3E-26 T 15-10-2018 IPR013783 Immunoglobulin-like fold AM378_12425 a855ce8489f3a2da8e71b8db6cda9c02 226 PRINTS PR00969 Pili chaperone signature 22 31 6.1E-33 T 15-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM378_12425 a855ce8489f3a2da8e71b8db6cda9c02 226 PRINTS PR00969 Pili chaperone signature 69 90 6.1E-33 T 15-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM378_12425 a855ce8489f3a2da8e71b8db6cda9c02 226 PRINTS PR00969 Pili chaperone signature 97 114 6.1E-33 T 15-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM378_12425 a855ce8489f3a2da8e71b8db6cda9c02 226 PRINTS PR00969 Pili chaperone signature 121 136 6.1E-33 T 15-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM378_12425 a855ce8489f3a2da8e71b8db6cda9c02 226 PRINTS PR00969 Pili chaperone signature 157 172 6.1E-33 T 15-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM378_12425 a855ce8489f3a2da8e71b8db6cda9c02 226 SUPERFAMILY SSF49584 133 220 2.62E-22 T 15-10-2018 IPR036316 Pili assembly chaperone, C-terminal domain superfamily AM378_12425 a855ce8489f3a2da8e71b8db6cda9c02 226 Gene3D G3DSA:2.60.40.10 21 140 2.9E-41 T 15-10-2018 IPR013783 Immunoglobulin-like fold AM378_12425 a855ce8489f3a2da8e71b8db6cda9c02 226 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 163 219 8.7E-18 T 15-10-2018 IPR016148 Pili assembly chaperone, C-terminal AM378_12425 a855ce8489f3a2da8e71b8db6cda9c02 226 SUPERFAMILY SSF49354 18 139 6.8E-42 T 15-10-2018 IPR008962 PapD-like superfamily AM378_07205 11b572ea2ab2a05dc850e8797e33c4ea 451 SUPERFAMILY SSF103473 8 430 1.03E-84 T 15-10-2018 IPR036259 MFS transporter superfamily AM378_07205 11b572ea2ab2a05dc850e8797e33c4ea 451 Gene3D G3DSA:1.20.1250.20 15 225 2.6E-42 T 15-10-2018 AM378_07205 11b572ea2ab2a05dc850e8797e33c4ea 451 Gene3D G3DSA:1.20.1250.20 250 435 1.5E-26 T 15-10-2018 AM378_07205 11b572ea2ab2a05dc850e8797e33c4ea 451 ProSitePatterns PS00216 Sugar transport proteins signature 1. 79 95 - T 15-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AM378_07205 11b572ea2ab2a05dc850e8797e33c4ea 451 ProSitePatterns PS00217 Sugar transport proteins signature 2. 121 146 - T 15-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AM378_07205 11b572ea2ab2a05dc850e8797e33c4ea 451 Pfam PF07690 Major Facilitator Superfamily 30 283 4.6E-35 T 15-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM378_07205 11b572ea2ab2a05dc850e8797e33c4ea 451 TIGRFAM TIGR00895 2A0115: MFS transporter, aromatic acid:H+ symporter (AAHS) family 10 404 1.2E-130 T 15-10-2018 IPR004746 Major facilitator superfamily, aromatic acid:H+ symporter family GO:0016021|GO:0022857|GO:0055085 AM378_23105 a9309fea3b0f2841248fd9345d76616f 108 Pfam PF12084 Protein of unknown function (DUF3561) 1 107 3.2E-48 T 15-10-2018 IPR022721 Protein of unknown function DUF3561 AM378_23105 a9309fea3b0f2841248fd9345d76616f 108 ProDom PD070788 MEMBRANE OXIDASE SUBUNIT CYTOCHROME YGBE INNER STY3057 TRANSMEMBRANE 1 108 4.0E-28 T 15-10-2018 IPR022721 Protein of unknown function DUF3561 AM378_07220 3eb36e41c64aa1d31975d78e695b8fad 116 Gene3D G3DSA:3.30.70.100 1 116 3.5E-49 T 15-10-2018 AM378_07220 3eb36e41c64aa1d31975d78e695b8fad 116 Pfam PF07237 Protein of unknown function (DUF1428) 2 102 2.4E-47 T 15-10-2018 IPR009874 Protein of unknown function DUF1428 AM378_07220 3eb36e41c64aa1d31975d78e695b8fad 116 SUPERFAMILY SSF54909 1 115 2.52E-52 T 15-10-2018 IPR011008 Dimeric alpha-beta barrel AM378_07220 3eb36e41c64aa1d31975d78e695b8fad 116 PIRSF PIRSF007028 1 116 4.8E-52 T 15-10-2018 IPR009874 Protein of unknown function DUF1428 AM378_05785 b309478b08077f79bcea2dc59590d60d 314 SUPERFAMILY SSF46785 6 88 7.12E-19 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM378_05785 b309478b08077f79bcea2dc59590d60d 314 Gene3D G3DSA:1.10.10.10 3 89 4.2E-23 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_05785 b309478b08077f79bcea2dc59590d60d 314 Gene3D G3DSA:3.40.190.10 110 281 2.1E-16 T 15-10-2018 AM378_05785 b309478b08077f79bcea2dc59590d60d 314 Gene3D G3DSA:3.40.190.10 167 265 2.1E-16 T 15-10-2018 AM378_05785 b309478b08077f79bcea2dc59590d60d 314 SUPERFAMILY SSF53850 88 290 3.57E-32 T 15-10-2018 AM378_05785 b309478b08077f79bcea2dc59590d60d 314 Pfam PF03466 LysR substrate binding domain 88 289 9.1E-28 T 15-10-2018 IPR005119 LysR, substrate-binding AM378_05785 b309478b08077f79bcea2dc59590d60d 314 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 62 2.0E-20 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_22830 ea482d9addfc2d7b9344668ec5418fff 439 Gene3D G3DSA:3.40.50.720 2 93 1.9E-24 T 15-10-2018 AM378_22830 ea482d9addfc2d7b9344668ec5418fff 439 SUPERFAMILY SSF53244 299 437 2.32E-51 T 15-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AM378_22830 ea482d9addfc2d7b9344668ec5418fff 439 Hamap MF_00639 UDP-N-acetylmuramoylalanine--D-glutamate ligase [murD]. 7 437 34.443 T 15-10-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AM378_22830 ea482d9addfc2d7b9344668ec5418fff 439 TIGRFAM TIGR01087 murD: UDP-N-acetylmuramoylalanine--D-glutamate ligase 8 435 1.6E-125 T 15-10-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AM378_22830 ea482d9addfc2d7b9344668ec5418fff 439 SUPERFAMILY SSF51984 3 94 1.96E-23 T 15-10-2018 AM378_22830 ea482d9addfc2d7b9344668ec5418fff 439 Pfam PF02875 Mur ligase family, glutamate ligase domain 301 373 1.6E-8 T 15-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 AM378_22830 ea482d9addfc2d7b9344668ec5418fff 439 SUPERFAMILY SSF53623 96 297 3.53E-56 T 15-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 AM378_22830 ea482d9addfc2d7b9344668ec5418fff 439 Gene3D G3DSA:3.40.1190.10 94 299 1.5E-79 T 15-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 AM378_22830 ea482d9addfc2d7b9344668ec5418fff 439 Pfam PF08245 Mur ligase middle domain 110 280 3.0E-27 T 15-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 AM378_22830 ea482d9addfc2d7b9344668ec5418fff 439 Gene3D G3DSA:3.90.190.20 300 434 4.5E-45 T 15-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AM378_20340 41b0fd2e390be5e389e04a9ca621be83 308 Pfam PF02653 Branched-chain amino acid transport system / permease component 12 292 1.9E-65 T 15-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 AM378_09980 dca7b65175823fd138eb62851cde86c8 576 TIGRFAM TIGR03354 VI_FHA: type VI secretion system FHA domain protein 235 563 3.4E-43 T 15-10-2018 IPR017735 Type VI secretion system, FHA domain-containing protein AM378_09980 dca7b65175823fd138eb62851cde86c8 576 Pfam PF00498 FHA domain 27 93 1.7E-7 T 15-10-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 AM378_09980 dca7b65175823fd138eb62851cde86c8 576 SUPERFAMILY SSF49879 23 107 1.13E-12 T 15-10-2018 IPR008984 SMAD/FHA domain superfamily GO:0005515 AM378_09980 dca7b65175823fd138eb62851cde86c8 576 Gene3D G3DSA:2.60.200.20 9 107 5.3E-10 T 15-10-2018 AM378_23145 64db1941fab7f90139cf57c9512ab111 253 Gene3D G3DSA:3.40.1210.10 1 253 3.5E-103 T 15-10-2018 IPR036523 SurE-like phosphatase/nucleotidase superfamily GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 AM378_23145 64db1941fab7f90139cf57c9512ab111 253 Hamap MF_00060 5'/3'-nucleotidase SurE [surE]. 1 249 39.752 T 15-10-2018 IPR030048 Survival protein SurE GO:0008252 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 AM378_23145 64db1941fab7f90139cf57c9512ab111 253 TIGRFAM TIGR00087 surE: 5'/3'-nucleotidase SurE 1 232 2.8E-74 T 15-10-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 AM378_23145 64db1941fab7f90139cf57c9512ab111 253 Pfam PF01975 Survival protein SurE 3 180 1.0E-56 T 15-10-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 AM378_23145 64db1941fab7f90139cf57c9512ab111 253 SUPERFAMILY SSF64167 1 247 1.09E-81 T 15-10-2018 AM378_13615 bc4ee1c491b5c1a656bf7a5f97a400d0 158 PIRSF PIRSF004923 1 151 2.3E-38 T 15-10-2018 IPR026268 Protein RseC AM378_13615 bc4ee1c491b5c1a656bf7a5f97a400d0 158 Pfam PF04246 Positive regulator of sigma(E), RseC/MucC 8 139 8.9E-36 T 15-10-2018 AM378_23550 c15f67885b3243b9a7b2dd257888606b 256 Gene3D G3DSA:2.40.440.10 39 159 6.9E-5 T 15-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like AM378_23550 c15f67885b3243b9a7b2dd257888606b 256 SUPERFAMILY SSF141523 39 156 2.22E-9 T 15-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like AM378_23550 c15f67885b3243b9a7b2dd257888606b 256 Pfam PF03734 L,D-transpeptidase catalytic domain 42 157 1.1E-7 T 15-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 AM378_06480 7f383b38131dff21a96ae1f5242b80d7 136 SUPERFAMILY SSF55729 26 121 2.78E-21 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase AM378_06480 7f383b38131dff21a96ae1f5242b80d7 136 Pfam PF00583 Acetyltransferase (GNAT) family 36 115 8.8E-10 T 15-10-2018 IPR000182 GNAT domain AM378_06480 7f383b38131dff21a96ae1f5242b80d7 136 Gene3D G3DSA:3.40.630.30 35 136 5.9E-22 T 15-10-2018 AM378_12525 0a1a63879c42f4228daab5f51f3e495b 259 SUPERFAMILY SSF117856 28 258 5.75E-87 T 15-10-2018 AM378_12525 0a1a63879c42f4228daab5f51f3e495b 259 Gene3D G3DSA:3.30.1330.80 104 226 9.2E-84 T 15-10-2018 AM378_12525 0a1a63879c42f4228daab5f51f3e495b 259 Gene3D G3DSA:3.30.1330.80 29 245 9.2E-84 T 15-10-2018 AM378_12525 0a1a63879c42f4228daab5f51f3e495b 259 PIRSF PIRSF001332 13 259 1.9E-97 T 15-10-2018 IPR005128 Alpha-acetolactate decarboxylase GO:0045151|GO:0047605 KEGG: 00650+4.1.1.5|KEGG: 00660+4.1.1.5|MetaCyc: PWY-5939 AM378_12525 0a1a63879c42f4228daab5f51f3e495b 259 TIGRFAM TIGR01252 acetolac_decarb: alpha-acetolactate decarboxylase 28 258 6.3E-94 T 15-10-2018 IPR005128 Alpha-acetolactate decarboxylase GO:0045151|GO:0047605 KEGG: 00650+4.1.1.5|KEGG: 00660+4.1.1.5|MetaCyc: PWY-5939 AM378_12525 0a1a63879c42f4228daab5f51f3e495b 259 Pfam PF03306 Alpha-acetolactate decarboxylase 29 245 8.8E-88 T 15-10-2018 IPR005128 Alpha-acetolactate decarboxylase GO:0045151|GO:0047605 KEGG: 00650+4.1.1.5|KEGG: 00660+4.1.1.5|MetaCyc: PWY-5939 AM378_12695 4481f486b6fdf2d15c31f40c76a54130 279 PIRSF PIRSF020419 1 279 4.7E-89 T 15-10-2018 IPR016773 Ferric uptake regulator, CjrA, predicted AM378_12695 4481f486b6fdf2d15c31f40c76a54130 279 Gene3D G3DSA:3.40.50.11550 35 257 3.4E-75 T 15-10-2018 AM378_12695 4481f486b6fdf2d15c31f40c76a54130 279 Gene3D G3DSA:1.10.8.760 155 211 3.4E-75 T 15-10-2018 AM378_12695 4481f486b6fdf2d15c31f40c76a54130 279 SUPERFAMILY SSF159501 29 276 1.15E-64 T 15-10-2018 AM378_12695 4481f486b6fdf2d15c31f40c76a54130 279 Pfam PF04187 Haem-binding uptake, Tiki superfamily, ChaN 47 243 6.0E-37 T 15-10-2018 IPR007314 Haem-binding uptake, Tiki superfamily, ChaN AM378_11140 d6559fddea606a94b589be658c204112 435 Pfam PF00144 Beta-lactamase 117 415 1.5E-40 T 15-10-2018 IPR001466 Beta-lactamase-related AM378_11140 d6559fddea606a94b589be658c204112 435 Gene3D G3DSA:1.20.58.710 163 264 1.8E-91 T 15-10-2018 AM378_11140 d6559fddea606a94b589be658c204112 435 SUPERFAMILY SSF56601 55 414 5.63E-78 T 15-10-2018 IPR012338 Beta-lactamase/transpeptidase-like AM378_11140 d6559fddea606a94b589be658c204112 435 Gene3D G3DSA:3.40.710.10 110 411 1.8E-91 T 15-10-2018 AM378_06465 f1f239f8f1beed7c7904095fdfb26ea6 400 Gene3D G3DSA:1.20.1250.20 5 391 7.7E-21 T 15-10-2018 AM378_06465 f1f239f8f1beed7c7904095fdfb26ea6 400 SUPERFAMILY SSF103473 6 392 1.57E-26 T 15-10-2018 IPR036259 MFS transporter superfamily AM378_06465 f1f239f8f1beed7c7904095fdfb26ea6 400 Pfam PF07690 Major Facilitator Superfamily 18 333 7.4E-15 T 15-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM378_15440 bfd3c52afb7816c9db6e2c20d2de8a2a 256 PIRSF PIRSF006648 13 253 1.2E-23 T 15-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 AM378_15440 bfd3c52afb7816c9db6e2c20d2de8a2a 256 Pfam PF01061 ABC-2 type transporter 9 218 7.0E-39 T 15-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 AM378_15440 bfd3c52afb7816c9db6e2c20d2de8a2a 256 PRINTS PR00164 ABC-2 type transport system membrane protein signature 176 195 7.5E-8 T 15-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 AM378_15440 bfd3c52afb7816c9db6e2c20d2de8a2a 256 PRINTS PR00164 ABC-2 type transport system membrane protein signature 196 215 7.5E-8 T 15-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 AM378_15440 bfd3c52afb7816c9db6e2c20d2de8a2a 256 PRINTS PR00164 ABC-2 type transport system membrane protein signature 138 162 7.5E-8 T 15-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 AM378_15440 bfd3c52afb7816c9db6e2c20d2de8a2a 256 PRINTS PR00164 ABC-2 type transport system membrane protein signature 58 80 7.5E-8 T 15-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 AM378_19800 4155a42eafade2c004af84a95cc4a985 249 SUPERFAMILY SSF51735 9 239 1.04E-36 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily AM378_19800 4155a42eafade2c004af84a95cc4a985 249 Pfam PF01370 NAD dependent epimerase/dehydratase family 10 177 9.7E-19 T 15-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 AM378_19800 4155a42eafade2c004af84a95cc4a985 249 Gene3D G3DSA:3.40.50.720 8 240 1.1E-48 T 15-10-2018 AM378_22955 06cd758102ac6f62206dbf9a2485468e 114 Gene3D G3DSA:2.60.300.12 8 114 1.2E-33 T 15-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 AM378_22955 06cd758102ac6f62206dbf9a2485468e 114 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 9 113 1.4E-38 T 15-10-2018 IPR016092 FeS cluster insertion protein GO:0005198|GO:0051536|GO:0097428 Reactome: R-HSA-1362409 AM378_22955 06cd758102ac6f62206dbf9a2485468e 114 Pfam PF01521 Iron-sulphur cluster biosynthesis 9 109 5.0E-20 T 15-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 AM378_22955 06cd758102ac6f62206dbf9a2485468e 114 SUPERFAMILY SSF89360 8 103 1.49E-30 T 15-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 AM378_22955 06cd758102ac6f62206dbf9a2485468e 114 Hamap MF_01380 Iron-sulfur cluster insertion protein ErpA [erpA]. 1 114 36.686 T 15-10-2018 IPR023063 FeS cluster insertion protein ErpA GO:0097428 AM378_22955 06cd758102ac6f62206dbf9a2485468e 114 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 95 112 - T 15-10-2018 IPR017870 FeS cluster insertion, C-terminal, conserved site Reactome: R-HSA-1362409 AM378_17420 3cd53a18d4ef769d1bf46a5701a1a210 129 SUPERFAMILY SSF53137 14 129 6.08E-48 T 15-10-2018 AM378_17420 3cd53a18d4ef769d1bf46a5701a1a210 129 Gene3D G3DSA:3.30.420.80 1 129 1.5E-58 T 15-10-2018 IPR036967 Ribosomal protein S11 superfamily GO:0003735|GO:0005840|GO:0006412 AM378_17420 3cd53a18d4ef769d1bf46a5701a1a210 129 ProSitePatterns PS00054 Ribosomal protein S11 signature. 97 119 - T 15-10-2018 IPR018102 Ribosomal S11, conserved site AM378_17420 3cd53a18d4ef769d1bf46a5701a1a210 129 Pfam PF00411 Ribosomal protein S11 19 128 1.9E-54 T 15-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 AM378_17420 3cd53a18d4ef769d1bf46a5701a1a210 129 Hamap MF_01310 30S ribosomal protein S11 [rpsK]. 7 129 32.572 T 15-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 AM378_17420 3cd53a18d4ef769d1bf46a5701a1a210 129 TIGRFAM TIGR03632 uS11_bact: ribosomal protein uS11 10 126 3.0E-55 T 15-10-2018 IPR019981 Ribosomal protein S11, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM378_17420 3cd53a18d4ef769d1bf46a5701a1a210 129 PIRSF PIRSF002131 1 129 5.8E-53 T 15-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 AM378_14170 6a1997f09c26e77e36baeb141dbc5688 227 Gene3D G3DSA:2.40.50.540 138 227 2.9E-29 T 15-10-2018 IPR038139 NlpE, C-terminal domain superfamily AM378_14170 6a1997f09c26e77e36baeb141dbc5688 227 Pfam PF17185 NlpE C-terminal OB domain 136 225 2.0E-37 T 15-10-2018 IPR033450 NlpE, C-terminal OB domain AM378_14170 6a1997f09c26e77e36baeb141dbc5688 227 Gene3D G3DSA:2.40.128.300 19 111 5.6E-30 T 15-10-2018 AM378_14170 6a1997f09c26e77e36baeb141dbc5688 227 Pfam PF04170 NlpE N-terminal domain 38 123 1.1E-25 T 15-10-2018 IPR007298 Copper resistance lipoprotein NlpE AM378_08595 07a04611303edd184356c22d16954dc6 196 PIRSF PIRSF004982 7 192 5.5E-50 T 15-10-2018 IPR004658 Outer membrane lipoprotein Slp GO:0019867 AM378_08595 07a04611303edd184356c22d16954dc6 196 TIGRFAM TIGR00752 slp: outer membrane lipoprotein, Slp family 17 192 1.2E-63 T 15-10-2018 IPR004658 Outer membrane lipoprotein Slp GO:0019867 AM378_08595 07a04611303edd184356c22d16954dc6 196 Pfam PF03843 Outer membrane lipoprotein Slp family 22 169 9.1E-47 T 15-10-2018 IPR004658 Outer membrane lipoprotein Slp GO:0019867 AM378_20250 e9516bafa71abf9bcbc2d1ee0a7a6bed 81 ProSitePatterns PS01148 Uncharacterized protein family UPF0033 signature. 12 36 - T 15-10-2018 IPR001455 TusA-like domain AM378_20250 e9516bafa71abf9bcbc2d1ee0a7a6bed 81 SUPERFAMILY SSF64307 4 80 1.57E-26 T 15-10-2018 IPR036868 TusA-like domain superfamily AM378_20250 e9516bafa71abf9bcbc2d1ee0a7a6bed 81 Hamap MF_00413 Sulfur carrier protein TusA [tusA]. 3 81 29.666 T 15-10-2018 IPR022931 Sulfur carrier protein TusA GO:0002143|GO:0097163 AM378_20250 e9516bafa71abf9bcbc2d1ee0a7a6bed 81 Gene3D G3DSA:3.30.110.40 1 80 6.5E-32 T 15-10-2018 IPR036868 TusA-like domain superfamily AM378_20250 e9516bafa71abf9bcbc2d1ee0a7a6bed 81 Pfam PF01206 Sulfurtransferase TusA 11 79 1.2E-24 T 15-10-2018 IPR001455 TusA-like domain AM378_17705 839c68ffa86c8fe9eabf26340a3e822c 405 Hamap MF_01107 Acetylornithine/succinyldiaminopimelate aminotransferase [argD]. 15 402 71.634 T 15-10-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 AM378_17705 839c68ffa86c8fe9eabf26340a3e822c 405 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 222 259 - T 15-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AM378_17705 839c68ffa86c8fe9eabf26340a3e822c 405 SUPERFAMILY SSF53383 17 399 2.93E-126 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM378_17705 839c68ffa86c8fe9eabf26340a3e822c 405 Gene3D G3DSA:3.90.1150.10 29 391 2.7E-156 T 15-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AM378_17705 839c68ffa86c8fe9eabf26340a3e822c 405 TIGRFAM TIGR00707 argD: transaminase, acetylornithine/succinylornithine family 16 398 2.0E-154 T 15-10-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 AM378_17705 839c68ffa86c8fe9eabf26340a3e822c 405 Gene3D G3DSA:3.40.640.10 59 304 2.7E-156 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AM378_17705 839c68ffa86c8fe9eabf26340a3e822c 405 Pfam PF00202 Aminotransferase class-III 24 398 1.1E-132 T 15-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AM378_17705 839c68ffa86c8fe9eabf26340a3e822c 405 TIGRFAM TIGR03246 arg_catab_astC: succinylornithine transaminase family 7 402 5.3E-207 T 15-10-2018 IPR017652 Acetyl/Succinylornithine transaminase family, bacteria GO:0006520|GO:0008483|GO:0030170 AM378_17705 839c68ffa86c8fe9eabf26340a3e822c 405 PIRSF PIRSF000521 173 402 5.3E-32 T 15-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AM378_17705 839c68ffa86c8fe9eabf26340a3e822c 405 PIRSF PIRSF000521 23 157 2.4E-8 T 15-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AM378_09250 d43a5bf716fae2c2b8b91375688285e6 317 Gene3D G3DSA:3.40.190.10 167 267 3.9E-85 T 15-10-2018 AM378_09250 d43a5bf716fae2c2b8b91375688285e6 317 Gene3D G3DSA:3.40.190.10 92 292 3.9E-85 T 15-10-2018 AM378_09250 d43a5bf716fae2c2b8b91375688285e6 317 SUPERFAMILY SSF53850 90 292 3.5E-41 T 15-10-2018 AM378_09250 d43a5bf716fae2c2b8b91375688285e6 317 Gene3D G3DSA:1.10.10.10 1 86 3.2E-17 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_09250 d43a5bf716fae2c2b8b91375688285e6 317 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 1.5E-6 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_09250 d43a5bf716fae2c2b8b91375688285e6 317 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 1.5E-6 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_09250 d43a5bf716fae2c2b8b91375688285e6 317 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 1.5E-6 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_09250 d43a5bf716fae2c2b8b91375688285e6 317 Pfam PF03466 LysR substrate binding domain 90 292 1.3E-42 T 15-10-2018 IPR005119 LysR, substrate-binding AM378_09250 d43a5bf716fae2c2b8b91375688285e6 317 SUPERFAMILY SSF46785 4 113 2.57E-13 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM378_09250 d43a5bf716fae2c2b8b91375688285e6 317 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 63 1.6E-12 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_23580 1ac5d9b7b85ff3cc816b8ae5cdcd6cdb 407 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 242 251 3.2E-5 T 15-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AM378_23580 1ac5d9b7b85ff3cc816b8ae5cdcd6cdb 407 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 373 381 3.2E-5 T 15-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AM378_23580 1ac5d9b7b85ff3cc816b8ae5cdcd6cdb 407 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 209 216 3.2E-5 T 15-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AM378_23580 1ac5d9b7b85ff3cc816b8ae5cdcd6cdb 407 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 276 295 3.2E-5 T 15-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AM378_23580 1ac5d9b7b85ff3cc816b8ae5cdcd6cdb 407 Hamap MF_00430 Na(+)-translocating NADH-quinone reductase subunit F [nqrF]. 1 407 63.14 T 15-10-2018 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F GO:0006814|GO:0016021|GO:0016655|GO:0051537|GO:0055114 AM378_23580 1ac5d9b7b85ff3cc816b8ae5cdcd6cdb 407 SUPERFAMILY SSF52343 255 402 5.5E-38 T 15-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AM378_23580 1ac5d9b7b85ff3cc816b8ae5cdcd6cdb 407 TIGRFAM TIGR01941 nqrF: NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit 3 407 1.3E-231 T 15-10-2018 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F GO:0006814|GO:0016021|GO:0016655|GO:0051537|GO:0055114 AM378_23580 1ac5d9b7b85ff3cc816b8ae5cdcd6cdb 407 SUPERFAMILY SSF63380 105 272 9.24E-37 T 15-10-2018 IPR017938 Riboflavin synthase-like beta-barrel AM378_23580 1ac5d9b7b85ff3cc816b8ae5cdcd6cdb 407 Gene3D G3DSA:3.10.20.30 34 125 3.2E-29 T 15-10-2018 IPR012675 Beta-grasp domain superfamily AM378_23580 1ac5d9b7b85ff3cc816b8ae5cdcd6cdb 407 Gene3D G3DSA:2.40.30.10 126 264 4.3E-52 T 15-10-2018 AM378_23580 1ac5d9b7b85ff3cc816b8ae5cdcd6cdb 407 Pfam PF00175 Oxidoreductase NAD-binding domain 277 386 4.5E-18 T 15-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 AM378_23580 1ac5d9b7b85ff3cc816b8ae5cdcd6cdb 407 Gene3D G3DSA:3.40.50.80 275 393 1.5E-33 T 15-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AM378_23580 1ac5d9b7b85ff3cc816b8ae5cdcd6cdb 407 SUPERFAMILY SSF54292 40 124 8.0E-22 T 15-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 AM378_23580 1ac5d9b7b85ff3cc816b8ae5cdcd6cdb 407 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 38 114 1.1E-10 T 15-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AM378_23580 1ac5d9b7b85ff3cc816b8ae5cdcd6cdb 407 Pfam PF00970 Oxidoreductase FAD-binding domain 202 266 9.7E-10 T 15-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 AM378_23580 1ac5d9b7b85ff3cc816b8ae5cdcd6cdb 407 PIRSF PIRSF000044 1 407 3.9E-221 T 15-10-2018 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F GO:0006814|GO:0016021|GO:0016655|GO:0051537|GO:0055114 AM378_05405 af2fa8e0e5cf2b26241d317d29ae42a7 465 SUPERFAMILY SSF118215 31 444 6.67E-97 T 15-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 AM378_05405 af2fa8e0e5cf2b26241d317d29ae42a7 465 Gene3D G3DSA:1.10.3860.10 21 462 2.9E-108 T 15-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 AM378_05405 af2fa8e0e5cf2b26241d317d29ae42a7 465 PRINTS PR00173 Glutamate-aspartate symporter signature 184 206 1.0E-25 T 15-10-2018 AM378_05405 af2fa8e0e5cf2b26241d317d29ae42a7 465 PRINTS PR00173 Glutamate-aspartate symporter signature 77 97 1.0E-25 T 15-10-2018 AM378_05405 af2fa8e0e5cf2b26241d317d29ae42a7 465 PRINTS PR00173 Glutamate-aspartate symporter signature 29 49 1.0E-25 T 15-10-2018 AM378_05405 af2fa8e0e5cf2b26241d317d29ae42a7 465 PRINTS PR00173 Glutamate-aspartate symporter signature 372 391 1.0E-25 T 15-10-2018 AM378_05405 af2fa8e0e5cf2b26241d317d29ae42a7 465 PRINTS PR00173 Glutamate-aspartate symporter signature 107 132 1.0E-25 T 15-10-2018 AM378_05405 af2fa8e0e5cf2b26241d317d29ae42a7 465 PRINTS PR00173 Glutamate-aspartate symporter signature 399 419 1.0E-25 T 15-10-2018 AM378_05405 af2fa8e0e5cf2b26241d317d29ae42a7 465 Pfam PF00375 Sodium:dicarboxylate symporter family 31 444 1.1E-103 T 15-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AM378_10995 4992d7271ac0e6f7999a7f359e4c9af2 140 Gene3D G3DSA:1.10.10.10 10 134 2.9E-29 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_10995 4992d7271ac0e6f7999a7f359e4c9af2 140 Pfam PF01638 HxlR-like helix-turn-helix 35 116 1.3E-18 T 15-10-2018 IPR002577 Helix-turn-helix, HxlR type AM378_10995 4992d7271ac0e6f7999a7f359e4c9af2 140 SUPERFAMILY SSF46785 29 133 3.91E-26 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM378_10725 0177b1e6e944bec973b81c505adccd90 189 Gene3D G3DSA:1.10.260.40 7 85 3.0E-18 T 15-10-2018 AM378_10725 0177b1e6e944bec973b81c505adccd90 189 SUPERFAMILY SSF47413 8 75 1.21E-17 T 15-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AM378_10725 0177b1e6e944bec973b81c505adccd90 189 SUPERFAMILY SSF51182 54 185 1.36E-18 T 15-10-2018 IPR011051 RmlC-like cupin domain superfamily AM378_10725 0177b1e6e944bec973b81c505adccd90 189 Pfam PF01381 Helix-turn-helix 16 70 1.6E-13 T 15-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM378_10725 0177b1e6e944bec973b81c505adccd90 189 Gene3D G3DSA:2.60.120.10 86 187 4.9E-9 T 15-10-2018 IPR014710 RmlC-like jelly roll fold AM378_10725 0177b1e6e944bec973b81c505adccd90 189 SMART SM00530 15 70 1.8E-15 T 15-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM378_22435 b2d0aa12b9e238c85748657712d4c695 215 Gene3D G3DSA:3.40.50.1240 1 211 6.7E-55 T 15-10-2018 IPR029033 Histidine phosphatase superfamily AM378_22435 b2d0aa12b9e238c85748657712d4c695 215 Hamap MF_01040 Probable phosphoglycerate mutase GpmB [gpmB]. 1 215 54.183 T 15-10-2018 IPR023086 Phosphoglycerate mutase, GpmB, probable GO:0004619|GO:0006096 AM378_22435 b2d0aa12b9e238c85748657712d4c695 215 SMART SM00855 3 157 2.6E-22 T 15-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 AM378_22435 b2d0aa12b9e238c85748657712d4c695 215 PIRSF PIRSF000709 2 173 3.2E-11 T 15-10-2018 AM378_22435 b2d0aa12b9e238c85748657712d4c695 215 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 4 194 4.7E-55 T 15-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 AM378_22435 b2d0aa12b9e238c85748657712d4c695 215 SUPERFAMILY SSF53254 1 209 4.98E-54 T 15-10-2018 IPR029033 Histidine phosphatase superfamily AM378_22435 b2d0aa12b9e238c85748657712d4c695 215 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 6 15 - T 15-10-2018 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824 AM378_08625 2c7f986f7b33aa147c1b0ec2a7290640 213 Pfam PF01081 KDPG and KHG aldolase 9 203 2.3E-88 T 15-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 AM378_08625 2c7f986f7b33aa147c1b0ec2a7290640 213 ProSitePatterns PS00160 KDPG and KHG aldolases Schiff-base forming residue. 128 141 - T 15-10-2018 IPR031338 KDPG/KHG aldolase, active site 2 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 AM378_08625 2c7f986f7b33aa147c1b0ec2a7290640 213 SUPERFAMILY SSF51569 3 208 3.66E-69 T 15-10-2018 AM378_08625 2c7f986f7b33aa147c1b0ec2a7290640 213 Gene3D G3DSA:3.20.20.70 1 212 2.5E-75 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM378_08625 2c7f986f7b33aa147c1b0ec2a7290640 213 ProSitePatterns PS00159 KDPG and KHG aldolases active site. 40 49 - T 15-10-2018 IPR031337 KDPG/KHG aldolase, active site 1 KEGG: 00030+4.1.2.14|KEGG: 00330+4.1.3.16|KEGG: 00630+4.1.3.16|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 AM378_08625 2c7f986f7b33aa147c1b0ec2a7290640 213 TIGRFAM TIGR01182 eda: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase 9 209 1.0E-85 T 15-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 AM378_09630 4bfd232ee9b2e038cb9bef501f7172d6 410 Gene3D G3DSA:3.30.750.140 257 370 6.3E-37 T 15-10-2018 IPR038610 FliK-like, C-terminal domain superfamily AM378_09630 4bfd232ee9b2e038cb9bef501f7172d6 410 PRINTS PR01007 Flagellar hook-length control protein signature 310 325 2.5E-16 T 15-10-2018 IPR001635 Flagellar hook-length control protein FliK GO:0009424|GO:0044780 AM378_09630 4bfd232ee9b2e038cb9bef501f7172d6 410 PRINTS PR01007 Flagellar hook-length control protein signature 112 135 2.5E-16 T 15-10-2018 IPR001635 Flagellar hook-length control protein FliK GO:0009424|GO:0044780 AM378_09630 4bfd232ee9b2e038cb9bef501f7172d6 410 PRINTS PR01007 Flagellar hook-length control protein signature 325 348 2.5E-16 T 15-10-2018 IPR001635 Flagellar hook-length control protein FliK GO:0009424|GO:0044780 AM378_09630 4bfd232ee9b2e038cb9bef501f7172d6 410 Pfam PF02120 Flagellar hook-length control protein FliK 277 358 6.3E-20 T 15-10-2018 IPR021136 Flagellar hook-length control protein-like, C-terminal AM378_11635 96249c202020ec4b3918228399eae9e2 376 Pfam PF00268 Ribonucleotide reductase, small chain 33 332 1.6E-46 T 15-10-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AM378_11635 96249c202020ec4b3918228399eae9e2 376 ProSitePatterns PS00368 Ribonucleotide reductase small subunit signature. 115 131 - T 15-10-2018 IPR030475 Ribonucleotide reductase small subunit, acitve site KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AM378_11635 96249c202020ec4b3918228399eae9e2 376 SUPERFAMILY SSF47240 3 340 3.61E-113 T 15-10-2018 IPR009078 Ferritin-like superfamily AM378_11635 96249c202020ec4b3918228399eae9e2 376 Gene3D G3DSA:1.10.620.20 2 340 2.2E-149 T 15-10-2018 IPR012348 Ribonucleotide reductase-like GO:0016491|GO:0055114 Reactome: R-HSA-499943 AM378_07925 c91bd94b0064ccec7ea46c21c1d4f83d 810 Gene3D G3DSA:3.20.70.20 10 810 9.5E-271 T 15-10-2018 AM378_07925 c91bd94b0064ccec7ea46c21c1d4f83d 810 ProSitePatterns PS00850 Glycine radical domain signature. 781 789 - T 15-10-2018 IPR019777 Formate C-acetyltransferase glycine radical, conserved site AM378_07925 c91bd94b0064ccec7ea46c21c1d4f83d 810 PIRSF PIRSF000379 51 810 2.4E-182 T 15-10-2018 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493 AM378_07925 c91bd94b0064ccec7ea46c21c1d4f83d 810 Pfam PF01228 Glycine radical 688 791 6.3E-29 T 15-10-2018 IPR001150 Glycine radical domain GO:0003824 AM378_07925 c91bd94b0064ccec7ea46c21c1d4f83d 810 Pfam PF02901 Pyruvate formate lyase-like 11 671 5.1E-206 T 15-10-2018 IPR004184 Pyruvate formate lyase domain GO:0003824 AM378_07925 c91bd94b0064ccec7ea46c21c1d4f83d 810 TIGRFAM TIGR01774 PFL2-3: glycyl radical enzyme, PFL2/glycerol dehydratase family 9 810 0.0 T 15-10-2018 IPR010098 Glycyl radical enzyme, PFL2/glycerol dehydratase family KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493 AM378_07925 c91bd94b0064ccec7ea46c21c1d4f83d 810 SUPERFAMILY SSF51998 6 809 1.22E-223 T 15-10-2018 AM378_07200 f2fcdf95424727dbe8428b722dd6007f 392 Pfam PF01494 FAD binding domain 2 341 1.6E-83 T 15-10-2018 IPR002938 FAD-binding domain GO:0071949 AM378_07200 f2fcdf95424727dbe8428b722dd6007f 392 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 277 292 1.0E-26 T 15-10-2018 AM378_07200 f2fcdf95424727dbe8428b722dd6007f 392 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 4 26 1.0E-26 T 15-10-2018 AM378_07200 f2fcdf95424727dbe8428b722dd6007f 392 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 150 165 1.0E-26 T 15-10-2018 AM378_07200 f2fcdf95424727dbe8428b722dd6007f 392 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 292 308 1.0E-26 T 15-10-2018 AM378_07200 f2fcdf95424727dbe8428b722dd6007f 392 Gene3D G3DSA:3.50.50.60 2 350 4.3E-169 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AM378_07200 f2fcdf95424727dbe8428b722dd6007f 392 SUPERFAMILY SSF51905 1 388 1.06E-52 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AM378_07200 f2fcdf95424727dbe8428b722dd6007f 392 SUPERFAMILY SSF54373 174 274 5.1E-43 T 15-10-2018 AM378_07200 f2fcdf95424727dbe8428b722dd6007f 392 Gene3D G3DSA:3.30.9.10 73 386 4.3E-169 T 15-10-2018 AM378_05055 4d530f93481857516ac6b72a96ac8f1c 147 Pfam PF06519 TolA C-terminal 59 144 9.7E-25 T 15-10-2018 IPR014161 Tol-Pal system, TolA GO:0005215|GO:0016021|GO:0043213 AM378_05055 4d530f93481857516ac6b72a96ac8f1c 147 Gene3D G3DSA:3.30.1150.10 70 140 7.9E-27 T 15-10-2018 AM378_05055 4d530f93481857516ac6b72a96ac8f1c 147 TIGRFAM TIGR02794 tolA_full: protein TolA 26 146 1.1E-21 T 15-10-2018 IPR014161 Tol-Pal system, TolA GO:0005215|GO:0016021|GO:0043213 AM378_05055 4d530f93481857516ac6b72a96ac8f1c 147 SUPERFAMILY SSF74653 60 146 1.37E-17 T 15-10-2018 AM378_07985 e305f76379d02582654dfc1ff4bcf0af 499 SUPERFAMILY SSF52540 6 226 7.38E-59 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_07985 e305f76379d02582654dfc1ff4bcf0af 499 SUPERFAMILY SSF52540 250 482 1.78E-45 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_07985 e305f76379d02582654dfc1ff4bcf0af 499 Gene3D G3DSA:3.40.50.300 2 231 5.2E-57 T 15-10-2018 AM378_07985 e305f76379d02582654dfc1ff4bcf0af 499 Gene3D G3DSA:3.40.50.300 239 494 2.5E-44 T 15-10-2018 AM378_07985 e305f76379d02582654dfc1ff4bcf0af 499 Pfam PF00005 ABC transporter 22 171 2.8E-29 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM378_07985 e305f76379d02582654dfc1ff4bcf0af 499 SMART SM00382 31 219 6.1E-13 T 15-10-2018 IPR003593 AAA+ ATPase domain AM378_07985 e305f76379d02582654dfc1ff4bcf0af 499 SMART SM00382 283 496 0.0015 T 15-10-2018 IPR003593 AAA+ ATPase domain AM378_07985 e305f76379d02582654dfc1ff4bcf0af 499 Pfam PF00005 ABC transporter 274 427 4.4E-21 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM378_07985 e305f76379d02582654dfc1ff4bcf0af 499 ProSitePatterns PS00211 ABC transporters family signature. 400 414 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM378_17430 4d06cdcbdaa96a508fb6a347610bdc61 38 TIGRFAM TIGR01022 rpmJ_bact: ribosomal protein bL36 1 38 4.7E-22 T 15-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM378_17430 4d06cdcbdaa96a508fb6a347610bdc61 38 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 38 17.971 T 15-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM378_17430 4d06cdcbdaa96a508fb6a347610bdc61 38 SUPERFAMILY SSF57840 1 38 5.49E-17 T 15-10-2018 IPR035977 Ribosomal protein L36 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM378_17430 4d06cdcbdaa96a508fb6a347610bdc61 38 ProDom PD002101 RIBOSOMAL L36 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID B SUBUNIT DIRECT SEQUENCING 9 38 4.0E-10 T 15-10-2018 AM378_17430 4d06cdcbdaa96a508fb6a347610bdc61 38 ProSitePatterns PS00828 Ribosomal protein L36 signature. 11 37 - T 15-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM378_17430 4d06cdcbdaa96a508fb6a347610bdc61 38 Pfam PF00444 Ribosomal protein L36 1 38 1.7E-20 T 15-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM378_17865 a73f2c6ccd7b5e6e839c577d51a19836 711 Pfam PF07095 Intracellular growth attenuator protein IgaA 1 705 0.0 T 15-10-2018 IPR010771 Intracellular growth attenuator IgaA GO:0009276|GO:0016021 AM378_17865 a73f2c6ccd7b5e6e839c577d51a19836 711 ProDom PD147088 MEMBRANE INNER TRANSMEMBRANE IGAA HOMOLOG DEHYDROGENASE GROWTH ATTENUATOR INTRACELLULAR GENOME 23 698 0.0 T 15-10-2018 IPR010771 Intracellular growth attenuator IgaA GO:0009276|GO:0016021 AM378_16340 55348c0d5ebcba96bcee0f7cdc5446cb 484 Gene3D G3DSA:3.40.309.10 261 450 3.6E-185 T 15-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 AM378_16340 55348c0d5ebcba96bcee0f7cdc5446cb 484 SUPERFAMILY SSF53720 6 481 1.02E-174 T 15-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 AM378_16340 55348c0d5ebcba96bcee0f7cdc5446cb 484 Pfam PF00171 Aldehyde dehydrogenase family 22 476 6.4E-172 T 15-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 AM378_16340 55348c0d5ebcba96bcee0f7cdc5446cb 484 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 254 261 - T 15-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 AM378_16340 55348c0d5ebcba96bcee0f7cdc5446cb 484 TIGRFAM TIGR01780 SSADH: succinate-semialdehyde dehydrogenase 30 476 8.9E-220 T 15-10-2018 IPR010102 Succinate semialdehyde dehydrogenase GO:0009013|GO:0009450|GO:0055114 Reactome: R-HSA-916853 AM378_16340 55348c0d5ebcba96bcee0f7cdc5446cb 484 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 282 293 - T 15-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 AM378_16340 55348c0d5ebcba96bcee0f7cdc5446cb 484 Gene3D G3DSA:3.40.605.10 20 473 3.6E-185 T 15-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 AM378_04695 81ef34f3e857272e459e9d263a0b60d4 326 Gene3D G3DSA:3.40.50.2300 76 316 3.5E-53 T 15-10-2018 AM378_04695 81ef34f3e857272e459e9d263a0b60d4 326 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 4.5E-16 T 15-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM378_04695 81ef34f3e857272e459e9d263a0b60d4 326 Pfam PF13377 Periplasmic binding protein-like domain 164 324 9.2E-38 T 15-10-2018 AM378_04695 81ef34f3e857272e459e9d263a0b60d4 326 SMART SM00354 1 71 2.3E-15 T 15-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM378_04695 81ef34f3e857272e459e9d263a0b60d4 326 Gene3D G3DSA:1.10.260.40 1 47 1.4E-17 T 15-10-2018 AM378_04695 81ef34f3e857272e459e9d263a0b60d4 326 Gene3D G3DSA:3.40.50.2300 155 318 3.5E-53 T 15-10-2018 AM378_04695 81ef34f3e857272e459e9d263a0b60d4 326 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 2.7E-5 T 15-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM378_04695 81ef34f3e857272e459e9d263a0b60d4 326 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 2.7E-5 T 15-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM378_04695 81ef34f3e857272e459e9d263a0b60d4 326 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 15-10-2018 AM378_04695 81ef34f3e857272e459e9d263a0b60d4 326 SUPERFAMILY SSF47413 1 50 2.63E-12 T 15-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AM378_04695 81ef34f3e857272e459e9d263a0b60d4 326 SUPERFAMILY SSF53822 73 317 5.89E-49 T 15-10-2018 IPR028082 Periplasmic binding protein-like I AM378_13270 c5138162c64b0e589abc442582deb90f 458 Hamap MF_00378 Exodeoxyribonuclease 7 large subunit [xseA]. 7 443 30.528 T 15-10-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 AM378_13270 c5138162c64b0e589abc442582deb90f 458 Pfam PF13742 OB-fold nucleic acid binding domain 10 103 1.6E-32 T 15-10-2018 IPR025824 OB-fold nucleic acid binding domain GO:0003676 AM378_13270 c5138162c64b0e589abc442582deb90f 458 Pfam PF02601 Exonuclease VII, large subunit 126 440 2.6E-101 T 15-10-2018 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 AM378_13270 c5138162c64b0e589abc442582deb90f 458 TIGRFAM TIGR00237 xseA: exodeoxyribonuclease VII, large subunit 11 358 2.7E-138 T 15-10-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 AM378_09865 ff7055f363c8a5b802528216cdb7b49f 779 Gene3D G3DSA:3.55.50.10 96 186 2.0E-109 T 15-10-2018 AM378_09865 ff7055f363c8a5b802528216cdb7b49f 779 SUPERFAMILY SSF69349 439 624 1.26E-33 T 15-10-2018 AM378_09865 ff7055f363c8a5b802528216cdb7b49f 779 Gene3D G3DSA:2.40.50.230 352 453 1.8E-42 T 15-10-2018 IPR037026 Vgr protein, OB-fold domain superfamily AM378_09865 ff7055f363c8a5b802528216cdb7b49f 779 SUPERFAMILY SSF69255 361 449 1.1E-31 T 15-10-2018 AM378_09865 ff7055f363c8a5b802528216cdb7b49f 779 Gene3D G3DSA:3.30.1920.30 222 284 2.0E-109 T 15-10-2018 AM378_09865 ff7055f363c8a5b802528216cdb7b49f 779 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 7 519 3.9E-181 T 15-10-2018 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset AM378_09865 ff7055f363c8a5b802528216cdb7b49f 779 Gene3D G3DSA:2.30.110.50 9 330 2.0E-109 T 15-10-2018 AM378_09865 ff7055f363c8a5b802528216cdb7b49f 779 SUPERFAMILY SSF69279 8 181 2.51E-56 T 15-10-2018 AM378_09865 ff7055f363c8a5b802528216cdb7b49f 779 SUPERFAMILY SSF69279 186 361 2.89E-42 T 15-10-2018 AM378_09865 ff7055f363c8a5b802528216cdb7b49f 779 Pfam PF05954 Phage late control gene D protein (GPD) 25 328 1.9E-90 T 15-10-2018 AM378_09865 ff7055f363c8a5b802528216cdb7b49f 779 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 19 502 1.3E-140 T 15-10-2018 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein AM378_08420 f80fbeea5815f461b2b6d88e3d311c84 425 SUPERFAMILY SSF51445 24 408 3.55E-72 T 15-10-2018 IPR017853 Glycoside hydrolase superfamily AM378_08420 f80fbeea5815f461b2b6d88e3d311c84 425 Pfam PF00704 Glycosyl hydrolases family 18 31 405 1.0E-65 T 15-10-2018 IPR001223 Glycoside hydrolase family 18, catalytic domain GO:0005975 AM378_08420 f80fbeea5815f461b2b6d88e3d311c84 425 ProSitePatterns PS01095 Chitinases family 18 active site. 150 158 - T 15-10-2018 IPR001579 Glycoside hydrolase, chitinase active site GO:0004553|GO:0005975 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 AM378_08420 f80fbeea5815f461b2b6d88e3d311c84 425 Gene3D G3DSA:3.10.50.10 280 376 6.8E-132 T 15-10-2018 IPR029070 Chitinase insertion domain superfamily AM378_08420 f80fbeea5815f461b2b6d88e3d311c84 425 SMART SM00636 28 405 9.0E-72 T 15-10-2018 IPR011583 Chitinase II GO:0008061 AM378_08420 f80fbeea5815f461b2b6d88e3d311c84 425 Gene3D G3DSA:3.20.20.80 48 405 6.8E-132 T 15-10-2018 AM378_02525 2dba61bdda41d83f2f6da219afce133e 434 ProSitePatterns PS00216 Sugar transport proteins signature 1. 83 99 - T 15-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AM378_02525 2dba61bdda41d83f2f6da219afce133e 434 SUPERFAMILY SSF103473 22 433 4.32E-60 T 15-10-2018 IPR036259 MFS transporter superfamily AM378_02525 2dba61bdda41d83f2f6da219afce133e 434 Gene3D G3DSA:1.20.1250.20 20 434 9.4E-60 T 15-10-2018 AM378_02525 2dba61bdda41d83f2f6da219afce133e 434 Pfam PF07690 Major Facilitator Superfamily 29 384 1.3E-25 T 15-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM378_02525 2dba61bdda41d83f2f6da219afce133e 434 ProSitePatterns PS00217 Sugar transport proteins signature 2. 133 158 - T 15-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AM378_23100 2a6dd6b95dbdace68faa0c814d08c098 229 SUPERFAMILY SSF52540 52 217 3.78E-36 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_23100 2a6dd6b95dbdace68faa0c814d08c098 229 Pfam PF01583 Adenylylsulphate kinase 55 208 3.0E-73 T 15-10-2018 AM378_23100 2a6dd6b95dbdace68faa0c814d08c098 229 TIGRFAM TIGR00455 apsK: adenylyl-sulfate kinase 38 221 6.8E-87 T 15-10-2018 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 AM378_23100 2a6dd6b95dbdace68faa0c814d08c098 229 Gene3D G3DSA:3.40.50.300 33 228 1.3E-78 T 15-10-2018 AM378_23100 2a6dd6b95dbdace68faa0c814d08c098 229 Hamap MF_00065 Adenylyl-sulfate kinase [cysC]. 54 225 38.656 T 15-10-2018 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 AM378_10645 8a4290cd177f4b6c82f3fd9e7d86d1f1 244 SUPERFAMILY SSF51735 3 190 1.47E-34 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily AM378_10645 8a4290cd177f4b6c82f3fd9e7d86d1f1 244 Gene3D G3DSA:3.40.50.720 2 240 4.9E-37 T 15-10-2018 AM378_10645 8a4290cd177f4b6c82f3fd9e7d86d1f1 244 Pfam PF00106 short chain dehydrogenase 4 176 1.3E-14 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_10645 8a4290cd177f4b6c82f3fd9e7d86d1f1 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 3.8E-10 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_10645 8a4290cd177f4b6c82f3fd9e7d86d1f1 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 73 84 3.8E-10 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_10645 8a4290cd177f4b6c82f3fd9e7d86d1f1 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 139 158 3.8E-10 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_10645 8a4290cd177f4b6c82f3fd9e7d86d1f1 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 158 175 3.8E-10 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_21930 6d890d1817d2f09580d2c0fa41bd1c2f 307 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 187 284 6.3E-19 T 15-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 AM378_21930 6d890d1817d2f09580d2c0fa41bd1c2f 307 SUPERFAMILY SSF51735 6 179 6.81E-47 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily AM378_21930 6d890d1817d2f09580d2c0fa41bd1c2f 307 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 7 180 3.2E-51 T 15-10-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 AM378_21930 6d890d1817d2f09580d2c0fa41bd1c2f 307 Gene3D G3DSA:3.40.50.720 1 183 1.7E-52 T 15-10-2018 AM378_21930 6d890d1817d2f09580d2c0fa41bd1c2f 307 SUPERFAMILY SSF48179 186 292 2.13E-21 T 15-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 AM378_21930 6d890d1817d2f09580d2c0fa41bd1c2f 307 Gene3D G3DSA:1.10.1040.10 189 306 9.7E-33 T 15-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AM378_21930 6d890d1817d2f09580d2c0fa41bd1c2f 307 PIRSF PIRSF000105 2 306 1.8E-80 T 15-10-2018 IPR022694 3-hydroxyacyl-CoA dehydrogenase GO:0003857|GO:0006631|GO:0055114|GO:0070403 AM378_10075 263060f859707ee2dd0f2476297b0bc3 138 Pfam PF05025 RbsD / FucU transport protein family 1 133 2.4E-23 T 15-10-2018 IPR007721 D-ribose pyranase RbsD/L-fucose mutarotase FucU GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 AM378_10075 263060f859707ee2dd0f2476297b0bc3 138 SUPERFAMILY SSF102546 1 133 1.14E-23 T 15-10-2018 IPR023750 RbsD-like superfamily GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 AM378_10075 263060f859707ee2dd0f2476297b0bc3 138 Gene3D G3DSA:3.40.1650.10 9 134 4.1E-25 T 15-10-2018 IPR023750 RbsD-like superfamily GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 AM378_05760 2914343cf604f575abec097cb0620acd 458 PIRSF PIRSF006603 6 457 1.4E-57 T 15-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AM378_05760 2914343cf604f575abec097cb0620acd 458 TIGRFAM TIGR00797 matE: MATE efflux family protein 17 423 1.8E-114 T 15-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AM378_05760 2914343cf604f575abec097cb0620acd 458 Pfam PF01554 MatE 17 177 1.7E-38 T 15-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AM378_05760 2914343cf604f575abec097cb0620acd 458 Pfam PF01554 MatE 245 406 2.6E-36 T 15-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AM378_05760 2914343cf604f575abec097cb0620acd 458 Hamap MF_00400 Multidrug resistance protein MdtK [mdtK]. 1 458 49.654 T 15-10-2018 IPR022913 Multidrug resistance protein MdtK AM378_12800 646eb0d8e58c93371aecf27845a1c838 128 Pfam PF03960 ArsC family 13 122 1.6E-16 T 15-10-2018 IPR006660 Arsenate reductase-like AM378_12800 646eb0d8e58c93371aecf27845a1c838 128 Gene3D G3DSA:3.40.30.10 9 124 1.8E-42 T 15-10-2018 AM378_12800 646eb0d8e58c93371aecf27845a1c838 128 SUPERFAMILY SSF52833 10 123 1.03E-33 T 15-10-2018 IPR036249 Thioredoxin-like superfamily AM378_12800 646eb0d8e58c93371aecf27845a1c838 128 TIGRFAM TIGR01617 arsC_related: transcriptional regulator, Spx/MgsR family 10 123 1.6E-36 T 15-10-2018 IPR006504 Transcriptional regulator Spx/MgsR AM378_24275 38ad2869207ee5bdd308740a11e98262 87 Hamap MF_00337 Exodeoxyribonuclease 7 small subunit [xseB]. 16 76 16.775 T 15-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 AM378_24275 38ad2869207ee5bdd308740a11e98262 87 Gene3D G3DSA:1.10.287.1040 10 87 3.9E-26 T 15-10-2018 IPR037004 Exonuclease VII, small subunit superfamily GO:0006308|GO:0008855|GO:0009318 AM378_24275 38ad2869207ee5bdd308740a11e98262 87 TIGRFAM TIGR01280 xseB: exodeoxyribonuclease VII, small subunit 16 71 2.2E-24 T 15-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 AM378_24275 38ad2869207ee5bdd308740a11e98262 87 ProDom PD028235 EXONUCLEASE SMALL SUBUNIT VII EXODEOXYRIBONUCLEASE HYDROLASE NUCLEASE PROBABLE VII SIMILAR 1 49 2.0E-11 T 15-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 AM378_24275 38ad2869207ee5bdd308740a11e98262 87 PIRSF PIRSF006488 5 85 4.2E-24 T 15-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 AM378_24275 38ad2869207ee5bdd308740a11e98262 87 SUPERFAMILY SSF116842 12 78 1.44E-21 T 15-10-2018 AM378_24275 38ad2869207ee5bdd308740a11e98262 87 Pfam PF02609 Exonuclease VII small subunit 17 68 4.3E-21 T 15-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 AM378_12185 485287d7ef61e0b761ac961694091ca5 183 SUPERFAMILY SSF52833 46 178 2.87E-38 T 15-10-2018 IPR036249 Thioredoxin-like superfamily AM378_12185 485287d7ef61e0b761ac961694091ca5 183 TIGRFAM TIGR00385 dsbE: periplasmic protein thiol:disulfide oxidoreductases, DsbE subfamily 6 178 1.6E-74 T 15-10-2018 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE GO:0015036|GO:0017004|GO:0030288 AM378_12185 485287d7ef61e0b761ac961694091ca5 183 ProSitePatterns PS00194 Thioredoxin family active site. 72 90 - T 15-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 AM378_12185 485287d7ef61e0b761ac961694091ca5 183 Pfam PF08534 Redoxin 42 166 3.6E-24 T 15-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 AM378_12185 485287d7ef61e0b761ac961694091ca5 183 Gene3D G3DSA:3.40.30.10 20 181 6.1E-44 T 15-10-2018 AM378_20235 214783bb03e9a7abbc2460352c5b8bfd 187 Pfam PF08786 DcrB 52 182 3.1E-26 T 15-10-2018 IPR014894 Protein DcrB AM378_20235 214783bb03e9a7abbc2460352c5b8bfd 187 Gene3D G3DSA:3.40.1000.10 50 187 9.8E-8 T 15-10-2018 IPR016123 Mog1/PsbP, alpha/beta/alpha sandwich AM378_08890 7fdbb9122591668143a5196e6272ff91 152 Pfam PF06173 Protein of unknown function (DUF986) 4 150 3.6E-62 T 15-10-2018 IPR009328 Protein of unknown function DUF986 AM378_08890 7fdbb9122591668143a5196e6272ff91 152 PIRSF PIRSF020687 1 152 8.6E-65 T 15-10-2018 IPR009328 Protein of unknown function DUF986 AM378_08890 7fdbb9122591668143a5196e6272ff91 152 ProDom PD091196 MEMBRANE UPF0266 TRANSMEMBRANE INNER YOBD PLU2700 LMO0779 PM0830 YPO1755/Y2554/YP1637 LIN0773 21 144 2.0E-30 T 15-10-2018 IPR009328 Protein of unknown function DUF986 AM378_08890 7fdbb9122591668143a5196e6272ff91 152 Hamap MF_01071 UPF0266 membrane protein YobD [yobD]. 1 152 30.98 T 15-10-2018 IPR009328 Protein of unknown function DUF986 AM378_19445 b0c6f31ecc4998c54ccffee4eee4474f 271 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 5 237 2.2E-28 T 15-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 AM378_19445 b0c6f31ecc4998c54ccffee4eee4474f 271 SUPERFAMILY SSF56784 1 269 8.53E-78 T 15-10-2018 IPR036412 HAD-like superfamily AM378_19445 b0c6f31ecc4998c54ccffee4eee4474f 271 Gene3D G3DSA:3.40.50.1000 5 265 6.9E-94 T 15-10-2018 IPR023214 HAD superfamily AM378_19445 b0c6f31ecc4998c54ccffee4eee4474f 271 ProSitePatterns PS01229 Hypothetical cof family signature 2. 218 240 - T 15-10-2018 AM378_19445 b0c6f31ecc4998c54ccffee4eee4474f 271 Pfam PF08282 haloacid dehalogenase-like hydrolase 6 264 3.4E-68 T 15-10-2018 AM378_19445 b0c6f31ecc4998c54ccffee4eee4474f 271 Gene3D G3DSA:3.30.1240.10 87 193 6.9E-94 T 15-10-2018 AM378_19445 b0c6f31ecc4998c54ccffee4eee4474f 271 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 5 264 2.8E-69 T 15-10-2018 IPR000150 Cof family GO:0016787 AM378_08780 331487d181f0a9bcf6cc3e847c3f1393 194 Pfam PF13302 Acetyltransferase (GNAT) domain 17 162 1.0E-17 T 15-10-2018 IPR000182 GNAT domain AM378_08780 331487d181f0a9bcf6cc3e847c3f1393 194 Gene3D G3DSA:3.40.630.30 10 191 4.9E-45 T 15-10-2018 AM378_08780 331487d181f0a9bcf6cc3e847c3f1393 194 SUPERFAMILY SSF55729 12 185 9.7E-41 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase AM378_10225 c6e52c974ee4ce76b06b8799aa97f00d 213 Gene3D G3DSA:3.40.630.30 1 213 1.0E-61 T 15-10-2018 AM378_10225 c6e52c974ee4ce76b06b8799aa97f00d 213 SUPERFAMILY SSF55729 4 177 1.52E-37 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase AM378_10225 c6e52c974ee4ce76b06b8799aa97f00d 213 Pfam PF13302 Acetyltransferase (GNAT) domain 27 153 1.3E-14 T 15-10-2018 IPR000182 GNAT domain AM378_21485 0ae5b5c1d5c975fc85559620a03c9161 200 SUPERFAMILY SSF51161 9 197 5.77E-37 T 15-10-2018 IPR011004 Trimeric LpxA-like superfamily AM378_21485 0ae5b5c1d5c975fc85559620a03c9161 200 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 115 143 - T 15-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 AM378_21485 0ae5b5c1d5c975fc85559620a03c9161 200 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 106 141 3.9E-8 T 15-10-2018 IPR001451 Hexapeptide repeat AM378_21485 0ae5b5c1d5c975fc85559620a03c9161 200 Gene3D G3DSA:2.160.10.10 14 198 3.1E-46 T 15-10-2018 AM378_21485 0ae5b5c1d5c975fc85559620a03c9161 200 TIGRFAM TIGR03308 phn_thr-fam: phosphonate metabolim protein, transferase hexapeptide repeat family 6 199 3.9E-79 T 15-10-2018 IPR017694 Phosphonate metabolism protein, transferase hexapeptide repeat family AM378_04220 a19667736501de6d748f0496878d7791 94 SUPERFAMILY SSF54909 1 80 1.05E-11 T 15-10-2018 IPR011008 Dimeric alpha-beta barrel AM378_04220 a19667736501de6d748f0496878d7791 94 Pfam PF03795 YCII-related domain 1 79 5.8E-8 T 15-10-2018 IPR005545 YCII-related AM378_10935 7805c993f6c6d4b9ae7a493f1ea45387 731 ProSitePatterns PS00435 Peroxidases proximal heme-ligand signature. 255 265 - T 15-10-2018 IPR019793 Peroxidases heam-ligand binding site Reactome: R-HSA-2408557 AM378_10935 7805c993f6c6d4b9ae7a493f1ea45387 731 PRINTS PR00458 Haem peroxidase superfamily signature 147 164 9.2E-18 T 15-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 AM378_10935 7805c993f6c6d4b9ae7a493f1ea45387 731 PRINTS PR00458 Haem peroxidase superfamily signature 314 329 9.2E-18 T 15-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 AM378_10935 7805c993f6c6d4b9ae7a493f1ea45387 731 PRINTS PR00458 Haem peroxidase superfamily signature 87 101 9.2E-18 T 15-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 AM378_10935 7805c993f6c6d4b9ae7a493f1ea45387 731 PRINTS PR00458 Haem peroxidase superfamily signature 255 270 9.2E-18 T 15-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 AM378_10935 7805c993f6c6d4b9ae7a493f1ea45387 731 PRINTS PR00458 Haem peroxidase superfamily signature 165 177 9.2E-18 T 15-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 AM378_10935 7805c993f6c6d4b9ae7a493f1ea45387 731 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 49 62 2.1E-54 T 15-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 AM378_10935 7805c993f6c6d4b9ae7a493f1ea45387 731 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 263 286 2.1E-54 T 15-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 AM378_10935 7805c993f6c6d4b9ae7a493f1ea45387 731 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 23 45 2.1E-54 T 15-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 AM378_10935 7805c993f6c6d4b9ae7a493f1ea45387 731 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 476 502 2.1E-54 T 15-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 AM378_10935 7805c993f6c6d4b9ae7a493f1ea45387 731 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 64 89 2.1E-54 T 15-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 AM378_10935 7805c993f6c6d4b9ae7a493f1ea45387 731 TIGRFAM TIGR00198 cat_per_HPI: catalase/peroxidase HPI 14 730 0.0 T 15-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 AM378_10935 7805c993f6c6d4b9ae7a493f1ea45387 731 Hamap MF_01961 Catalase-peroxidase [katG]. 2 731 42.043 T 15-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 AM378_10935 7805c993f6c6d4b9ae7a493f1ea45387 731 Pfam PF00141 Peroxidase 66 390 3.1E-47 T 15-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 AM378_10935 7805c993f6c6d4b9ae7a493f1ea45387 731 Pfam PF00141 Peroxidase 398 703 1.8E-37 T 15-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 AM378_10935 7805c993f6c6d4b9ae7a493f1ea45387 731 Gene3D G3DSA:1.10.520.10 19 426 1.1E-221 T 15-10-2018 AM378_10935 7805c993f6c6d4b9ae7a493f1ea45387 731 Gene3D G3DSA:1.10.420.20 187 393 1.1E-221 T 15-10-2018 AM378_10935 7805c993f6c6d4b9ae7a493f1ea45387 731 ProSitePatterns PS00436 Peroxidases active site signature. 87 98 - T 15-10-2018 IPR019794 Peroxidase, active site GO:0004601|GO:0055114 AM378_10935 7805c993f6c6d4b9ae7a493f1ea45387 731 SUPERFAMILY SSF48113 426 730 6.93E-114 T 15-10-2018 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 AM378_10935 7805c993f6c6d4b9ae7a493f1ea45387 731 Gene3D G3DSA:1.10.520.10 428 730 2.4E-149 T 15-10-2018 AM378_10935 7805c993f6c6d4b9ae7a493f1ea45387 731 SUPERFAMILY SSF48113 17 425 7.81E-152 T 15-10-2018 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 AM378_10935 7805c993f6c6d4b9ae7a493f1ea45387 731 Gene3D G3DSA:1.10.420.10 584 706 2.4E-149 T 15-10-2018 AM378_05090 7ed5209b36d862031f0a2b0b8aa62806 116 SUPERFAMILY SSF51316 1 113 4.18E-29 T 15-10-2018 IPR011057 Mss4-like superfamily AM378_05090 7ed5209b36d862031f0a2b0b8aa62806 116 Gene3D G3DSA:2.170.150.70 3 115 2.3E-30 T 15-10-2018 AM378_05090 7ed5209b36d862031f0a2b0b8aa62806 116 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 26 87 1.7E-7 T 15-10-2018 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 AM378_00645 10cb4c0df43cab9e221ccd4b544e59f1 71 Pfam PF02416 mttA/Hcf106 family 4 48 6.0E-12 T 15-10-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 AM378_00645 10cb4c0df43cab9e221ccd4b544e59f1 71 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 1 70 19.79 T 15-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 AM378_00645 10cb4c0df43cab9e221ccd4b544e59f1 71 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 3 47 2.6E-18 T 15-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 AM378_00645 10cb4c0df43cab9e221ccd4b544e59f1 71 Hamap MF_00903 Probable Sec-independent protein translocase protein TatE [tatE]. 1 70 27.872 T 15-10-2018 IPR024905 Sec-independent protein translocase protein TatE AM378_16130 4ffa843611d0775efdd0b00ca4800966 389 Pfam PF17482 Phage tail sheath C-terminal domain 274 376 1.5E-17 T 15-10-2018 IPR020287 Tail sheath protein, C-terminal domain AM378_16130 4ffa843611d0775efdd0b00ca4800966 389 Pfam PF04984 Phage tail sheath protein subtilisin-like domain 108 273 7.5E-32 T 15-10-2018 IPR035089 Tail sheath protein, subtilisin-like domain AM378_04520 e63b181c4c43ef452f111dff0e9f10ad 192 SUPERFAMILY SSF89155 2 181 4.19E-46 T 15-10-2018 IPR036411 TorD-like superfamily AM378_04520 e63b181c4c43ef452f111dff0e9f10ad 192 Pfam PF02613 Nitrate reductase delta subunit 44 147 2.4E-11 T 15-10-2018 IPR020945 DMSO/Nitrate reductase chaperone AM378_04520 e63b181c4c43ef452f111dff0e9f10ad 192 PIRSF PIRSF004690 1 186 2.8E-65 T 15-10-2018 IPR026269 Tat proofreading chaperone DmsD-type AM378_04520 e63b181c4c43ef452f111dff0e9f10ad 192 Gene3D G3DSA:1.10.3480.10 1 185 5.6E-32 T 15-10-2018 AM378_05085 40a17eafd639d93939f0297912dfb258 138 Pfam PF09391 Protein of unknown function (DUF2000) 7 138 1.9E-25 T 15-10-2018 IPR018988 Protein of unknown function DUF2000 AM378_05085 40a17eafd639d93939f0297912dfb258 138 Gene3D G3DSA:3.40.1490.10 5 137 3.2E-12 T 15-10-2018 IPR023476 Peptidyl-tRNA hydrolase II domain superfamily MetaCyc: PWY-6308 AM378_05085 40a17eafd639d93939f0297912dfb258 138 SUPERFAMILY SSF102462 6 138 4.45E-23 T 15-10-2018 IPR023476 Peptidyl-tRNA hydrolase II domain superfamily MetaCyc: PWY-6308 AM378_05955 92e32aac333e4f517f99167728ff12b6 126 Pfam PF12680 SnoaL-like domain 12 111 5.9E-15 T 15-10-2018 IPR037401 SnoaL-like domain AM378_05955 92e32aac333e4f517f99167728ff12b6 126 SUPERFAMILY SSF54427 7 116 6.05E-31 T 15-10-2018 IPR032710 NTF2-like domain superfamily AM378_05955 92e32aac333e4f517f99167728ff12b6 126 Gene3D G3DSA:3.10.450.50 5 118 3.7E-43 T 15-10-2018 AM378_05955 92e32aac333e4f517f99167728ff12b6 126 PIRSF PIRSF030561 4 116 4.3E-38 T 15-10-2018 IPR008317 Uncharacterised conserved protein UCP030561 AM378_03445 fdb0553ba5f81e0a5835b8458c5599f3 246 Pfam PF04055 Radical SAM superfamily 24 178 1.7E-29 T 15-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AM378_03445 fdb0553ba5f81e0a5835b8458c5599f3 246 Pfam PF13353 4Fe-4S single cluster domain 16 136 4.8E-18 T 15-10-2018 AM378_03445 fdb0553ba5f81e0a5835b8458c5599f3 246 PIRSF PIRSF000371 1 47 5.8E-11 T 15-10-2018 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 AM378_03445 fdb0553ba5f81e0a5835b8458c5599f3 246 PIRSF PIRSF000371 44 246 1.5E-43 T 15-10-2018 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 AM378_03445 fdb0553ba5f81e0a5835b8458c5599f3 246 Gene3D G3DSA:3.20.20.70 2 246 1.4E-103 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM378_03445 fdb0553ba5f81e0a5835b8458c5599f3 246 TIGRFAM TIGR02493 PFLA: pyruvate formate-lyase 1-activating enzyme 6 239 6.8E-104 T 15-10-2018 IPR012838 Pyruvate formate-lyase 1 activating enzyme GO:0043365|GO:0055114 AM378_03445 fdb0553ba5f81e0a5835b8458c5599f3 246 SUPERFAMILY SSF102114 23 214 7.65E-22 T 15-10-2018 AM378_03445 fdb0553ba5f81e0a5835b8458c5599f3 246 ProSitePatterns PS01087 Radical activating enzymes signature. 18 39 - T 15-10-2018 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 AM378_07135 5b16cb76b1d180e5e563708ec1609e52 226 Pfam PF13489 Methyltransferase domain 32 185 1.2E-12 T 15-10-2018 AM378_07135 5b16cb76b1d180e5e563708ec1609e52 226 Gene3D G3DSA:3.40.50.150 9 192 1.8E-23 T 15-10-2018 AM378_07135 5b16cb76b1d180e5e563708ec1609e52 226 SUPERFAMILY SSF53335 11 216 5.52E-28 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM378_01860 5343278671ed0b0fb32cbb961454d87b 310 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 32 287 3.6E-47 T 15-10-2018 AM378_01860 5343278671ed0b0fb32cbb961454d87b 310 TIGRFAM TIGR03431 PhnD: phosphonate ABC transporter, periplasmic phosphonate binding protein 1 306 7.3E-92 T 15-10-2018 IPR017797 Phosphonate ABC transporter, substrate-binding protein GO:0015716|GO:0043190 AM378_01860 5343278671ed0b0fb32cbb961454d87b 310 TIGRFAM TIGR01098 3A0109s03R: phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein 1 269 2.3E-77 T 15-10-2018 IPR005770 Phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein GO:0043190|GO:0055085 AM378_01860 5343278671ed0b0fb32cbb961454d87b 310 Gene3D G3DSA:3.40.190.10 118 244 1.3E-54 T 15-10-2018 AM378_01860 5343278671ed0b0fb32cbb961454d87b 310 Gene3D G3DSA:3.40.190.10 32 274 1.3E-54 T 15-10-2018 AM378_01860 5343278671ed0b0fb32cbb961454d87b 310 SUPERFAMILY SSF53850 45 300 5.88E-44 T 15-10-2018 AM378_12590 247982708fd8d81ff195440647f1e84f 85 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 1 82 5.9E-31 T 15-10-2018 IPR000032 Phosphocarrier protein HPr-like AM378_12590 247982708fd8d81ff195440647f1e84f 85 PRINTS PR00107 Phosphocarrier protein signature 38 53 2.5E-20 T 15-10-2018 IPR000032 Phosphocarrier protein HPr-like AM378_12590 247982708fd8d81ff195440647f1e84f 85 PRINTS PR00107 Phosphocarrier protein signature 53 70 2.5E-20 T 15-10-2018 IPR000032 Phosphocarrier protein HPr-like AM378_12590 247982708fd8d81ff195440647f1e84f 85 PRINTS PR00107 Phosphocarrier protein signature 13 29 2.5E-20 T 15-10-2018 IPR000032 Phosphocarrier protein HPr-like AM378_12590 247982708fd8d81ff195440647f1e84f 85 Gene3D G3DSA:3.30.1340.10 1 85 9.9E-36 T 15-10-2018 IPR035895 HPr-like superfamily AM378_12590 247982708fd8d81ff195440647f1e84f 85 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 39 54 - T 15-10-2018 IPR002114 Phosphotransferase system, HPr serine phosphorylation site AM378_12590 247982708fd8d81ff195440647f1e84f 85 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 13 20 - T 15-10-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site AM378_12590 247982708fd8d81ff195440647f1e84f 85 Pfam PF00381 PTS HPr component phosphorylation site 3 82 1.0E-28 T 15-10-2018 IPR000032 Phosphocarrier protein HPr-like AM378_12590 247982708fd8d81ff195440647f1e84f 85 SUPERFAMILY SSF55594 1 82 1.31E-27 T 15-10-2018 IPR035895 HPr-like superfamily AM378_02260 011313210e34e267c5f8521376cfe9b9 172 ProSitePatterns PS00694 Enterobacterial virulence outer membrane protein signature 1. 47 55 - T 15-10-2018 IPR000758 Virulence-related outer membrane protein GO:0009279 AM378_02260 011313210e34e267c5f8521376cfe9b9 172 PRINTS PR00316 Enterobacterial virulence outer membrane protein signature 46 58 6.0E-38 T 15-10-2018 IPR000758 Virulence-related outer membrane protein GO:0009279 AM378_02260 011313210e34e267c5f8521376cfe9b9 172 PRINTS PR00316 Enterobacterial virulence outer membrane protein signature 133 154 6.0E-38 T 15-10-2018 IPR000758 Virulence-related outer membrane protein GO:0009279 AM378_02260 011313210e34e267c5f8521376cfe9b9 172 PRINTS PR00316 Enterobacterial virulence outer membrane protein signature 160 171 6.0E-38 T 15-10-2018 IPR000758 Virulence-related outer membrane protein GO:0009279 AM378_02260 011313210e34e267c5f8521376cfe9b9 172 PRINTS PR00316 Enterobacterial virulence outer membrane protein signature 85 108 6.0E-38 T 15-10-2018 IPR000758 Virulence-related outer membrane protein GO:0009279 AM378_02260 011313210e34e267c5f8521376cfe9b9 172 SUPERFAMILY SSF56925 28 172 3.14E-28 T 15-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel AM378_02260 011313210e34e267c5f8521376cfe9b9 172 Gene3D G3DSA:2.40.160.20 25 172 4.8E-52 T 15-10-2018 AM378_02260 011313210e34e267c5f8521376cfe9b9 172 ProSitePatterns PS00695 Enterobacterial virulence outer membrane protein signature 2. 164 172 - T 15-10-2018 IPR000758 Virulence-related outer membrane protein GO:0009279 AM378_02260 011313210e34e267c5f8521376cfe9b9 172 Pfam PF13505 Outer membrane protein beta-barrel domain 10 172 5.3E-22 T 15-10-2018 IPR027385 Outer membrane protein beta-barrel AM378_11995 4d857416e998c0a2883807de2efd1b16 472 Pfam PF00512 His Kinase A (phospho-acceptor) domain 248 311 3.6E-8 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM378_11995 4d857416e998c0a2883807de2efd1b16 472 SMART SM00304 194 246 2.5E-4 T 15-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AM378_11995 4d857416e998c0a2883807de2efd1b16 472 Gene3D G3DSA:1.10.287.130 198 313 4.8E-17 T 15-10-2018 AM378_11995 4d857416e998c0a2883807de2efd1b16 472 Pfam PF08521 Two-component sensor kinase N-terminal 22 170 1.3E-40 T 15-10-2018 IPR013727 Two-component sensor kinase, N-terminal AM378_11995 4d857416e998c0a2883807de2efd1b16 472 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 363 453 1.4E-11 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AM378_11995 4d857416e998c0a2883807de2efd1b16 472 SUPERFAMILY SSF55874 316 470 2.36E-26 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AM378_11995 4d857416e998c0a2883807de2efd1b16 472 SMART SM00387 359 472 7.2E-22 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AM378_11995 4d857416e998c0a2883807de2efd1b16 472 Gene3D G3DSA:3.30.565.10 319 471 1.1E-23 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AM378_11995 4d857416e998c0a2883807de2efd1b16 472 SUPERFAMILY SSF47384 230 312 7.26E-14 T 15-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AM378_11995 4d857416e998c0a2883807de2efd1b16 472 SMART SM00388 247 312 6.6E-10 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM378_06100 60d8aecc00ec078feb33e2cce4eab80a 302 Gene3D G3DSA:3.40.190.10 165 267 8.5E-60 T 15-10-2018 AM378_06100 60d8aecc00ec078feb33e2cce4eab80a 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 5.3E-23 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_06100 60d8aecc00ec078feb33e2cce4eab80a 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 2.6E-8 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_06100 60d8aecc00ec078feb33e2cce4eab80a 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 2.6E-8 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_06100 60d8aecc00ec078feb33e2cce4eab80a 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 2.6E-8 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_06100 60d8aecc00ec078feb33e2cce4eab80a 302 SUPERFAMILY SSF46785 6 113 2.5E-23 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM378_06100 60d8aecc00ec078feb33e2cce4eab80a 302 Gene3D G3DSA:1.10.10.10 4 92 8.9E-26 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_06100 60d8aecc00ec078feb33e2cce4eab80a 302 Gene3D G3DSA:3.40.190.10 93 293 8.5E-60 T 15-10-2018 AM378_06100 60d8aecc00ec078feb33e2cce4eab80a 302 Pfam PF03466 LysR substrate binding domain 89 295 3.1E-37 T 15-10-2018 IPR005119 LysR, substrate-binding AM378_06100 60d8aecc00ec078feb33e2cce4eab80a 302 SUPERFAMILY SSF53850 90 298 2.33E-39 T 15-10-2018 AM378_19280 7b9971ed6c88455d372e2e1c8ecf572d 79 Pfam PF00137 ATP synthase subunit C 11 69 1.5E-9 T 15-10-2018 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 AM378_19280 7b9971ed6c88455d372e2e1c8ecf572d 79 ProSitePatterns PS00605 ATP synthase c subunit signature. 40 61 - T 15-10-2018 IPR020537 ATP synthase, F0 complex, subunit C, DCCD-binding site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM378_19280 7b9971ed6c88455d372e2e1c8ecf572d 79 Hamap MF_01396 ATP synthase subunit c [atpH]. 10 75 14.323 T 15-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM378_19280 7b9971ed6c88455d372e2e1c8ecf572d 79 PRINTS PR00124 ATP synthase C subunit signature 12 31 1.6E-8 T 15-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM378_19280 7b9971ed6c88455d372e2e1c8ecf572d 79 PRINTS PR00124 ATP synthase C subunit signature 50 75 1.6E-8 T 15-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM378_19280 7b9971ed6c88455d372e2e1c8ecf572d 79 PRINTS PR00124 ATP synthase C subunit signature 33 48 1.6E-8 T 15-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM378_19280 7b9971ed6c88455d372e2e1c8ecf572d 79 SUPERFAMILY SSF81333 3 77 6.93E-18 T 15-10-2018 IPR035921 F/V-ATP synthase subunit C superfamily AM378_19280 7b9971ed6c88455d372e2e1c8ecf572d 79 TIGRFAM TIGR01260 ATP_synt_c: ATP synthase F0, C subunit 20 77 1.9E-31 T 15-10-2018 IPR005953 ATP synthase, F0 complex, subunit C, bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 AM378_19280 7b9971ed6c88455d372e2e1c8ecf572d 79 Gene3D G3DSA:1.20.20.10 1 79 1.6E-33 T 15-10-2018 IPR038662 F1F0 ATP synthase subunit C superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM378_11195 1287fb6ccb14b0bd2a9152423f154fe8 305 Gene3D G3DSA:3.40.50.2300 36 288 5.8E-75 T 15-10-2018 AM378_11195 1287fb6ccb14b0bd2a9152423f154fe8 305 Pfam PF13407 Periplasmic binding protein domain 31 276 7.2E-53 T 15-10-2018 IPR025997 Periplasmic binding protein AM378_11195 1287fb6ccb14b0bd2a9152423f154fe8 305 SUPERFAMILY SSF53822 15 301 9.6E-72 T 15-10-2018 IPR028082 Periplasmic binding protein-like I AM378_11195 1287fb6ccb14b0bd2a9152423f154fe8 305 Gene3D G3DSA:3.40.50.2300 128 299 5.8E-75 T 15-10-2018 AM378_12660 20d86f91af1f8c31f42af63b7116ad71 141 Hamap MF_01127 Acetyltransferase YpeA [ypeA]. 1 141 49.277 T 15-10-2018 IPR023072 Acetyltransferase, YpeA GO:0016747 AM378_12660 20d86f91af1f8c31f42af63b7116ad71 141 PIRSF PIRSF037663 1 136 2.5E-12 T 15-10-2018 IPR017255 Acetyltransferase, GNAT, predicted AM378_12660 20d86f91af1f8c31f42af63b7116ad71 141 Pfam PF00583 Acetyltransferase (GNAT) family 18 123 3.4E-20 T 15-10-2018 IPR000182 GNAT domain AM378_12660 20d86f91af1f8c31f42af63b7116ad71 141 Gene3D G3DSA:3.40.630.30 1 141 3.3E-47 T 15-10-2018 AM378_12660 20d86f91af1f8c31f42af63b7116ad71 141 SUPERFAMILY SSF55729 1 129 4.76E-31 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase AM378_15355 95f9af269591601907845b372a5e2b72 265 Gene3D G3DSA:3.40.50.300 5 257 5.3E-67 T 15-10-2018 AM378_15355 95f9af269591601907845b372a5e2b72 265 Pfam PF00005 ABC transporter 27 176 8.0E-31 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM378_15355 95f9af269591601907845b372a5e2b72 265 SMART SM00382 36 224 4.3E-15 T 15-10-2018 IPR003593 AAA+ ATPase domain AM378_15355 95f9af269591601907845b372a5e2b72 265 SUPERFAMILY SSF52540 13 239 9.4E-61 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_15355 95f9af269591601907845b372a5e2b72 265 ProSitePatterns PS00211 ABC transporters family signature. 148 162 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM378_10360 7f29120107114cb45fc70fa9d850ddf5 146 Gene3D G3DSA:3.10.129.10 7 146 2.4E-57 T 15-10-2018 AM378_10360 7f29120107114cb45fc70fa9d850ddf5 146 TIGRFAM TIGR02286 PaaD: phenylacetic acid degradation protein PaaD 25 137 4.6E-47 T 15-10-2018 IPR011973 Phenylacetic acid degradation protein PaaD GO:0016790 AM378_10360 7f29120107114cb45fc70fa9d850ddf5 146 SUPERFAMILY SSF54637 7 132 9.84E-32 T 15-10-2018 IPR029069 HotDog domain superfamily AM378_10360 7f29120107114cb45fc70fa9d850ddf5 146 Pfam PF03061 Thioesterase superfamily 54 128 6.2E-18 T 15-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 AM378_10360 7f29120107114cb45fc70fa9d850ddf5 146 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 22 135 3.3E-33 T 15-10-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 AM378_12760 1e21fa6f51dba757526810241a3075d8 533 SMART SM01276 155 453 0.0016 T 15-10-2018 IPR031161 Peptidase family M60 domain AM378_12760 1e21fa6f51dba757526810241a3075d8 533 SUPERFAMILY SSF51055 5 64 1.69E-6 T 15-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 AM378_12760 1e21fa6f51dba757526810241a3075d8 533 Gene3D G3DSA:1.10.390.30 370 533 3.6E-14 T 15-10-2018 AM378_12760 1e21fa6f51dba757526810241a3075d8 533 Pfam PF13402 Peptidase M60, enhancin and enhancin-like 352 514 1.3E-13 T 15-10-2018 IPR031161 Peptidase family M60 domain AM378_12760 1e21fa6f51dba757526810241a3075d8 533 Gene3D G3DSA:2.10.10.20 5 65 4.3E-5 T 15-10-2018 AM378_12160 653c007cd21cdbe80c56bfa27af26daf 98 Gene3D G3DSA:3.30.70.860 27 98 7.0E-30 T 15-10-2018 IPR035571 UPF0234-like, C-terminal AM378_12160 653c007cd21cdbe80c56bfa27af26daf 98 Pfam PF04175 Protein of unknown function (DUF406) 7 98 6.4E-41 T 15-10-2018 IPR005272 Conserved hypothetical protein CHP00743 AM378_12160 653c007cd21cdbe80c56bfa27af26daf 98 TIGRFAM TIGR00743 TIGR00743: conserved hypothetical protein 5 98 1.3E-42 T 15-10-2018 IPR005272 Conserved hypothetical protein CHP00743 AM378_11120 c20823c35c76a7cf4d06f0524855680b 356 TIGRFAM TIGR04407 LptF_YjgP: LPS export ABC transporter permease LptF 3 345 1.1E-81 T 15-10-2018 IPR030922 LPS export ABC transporter permease LptF GO:0043190|GO:0055085 AM378_11120 c20823c35c76a7cf4d06f0524855680b 356 Pfam PF03739 Predicted permease YjgP/YjgQ family 6 345 5.9E-53 T 15-10-2018 IPR005495 Permease LptG/LptF-related GO:0016021 AM378_18775 c6d545e58b8c4a5a7dc15b82ac8cb0bb 139 Pfam PF05656 Protein of unknown function (DUF805) 7 132 3.8E-22 T 15-10-2018 IPR008523 Protein of unknown function DUF805 GO:0016021 AM378_15650 ac014d54345dba3b91b25f663f83fcc4 358 Pfam PF01464 Transglycosylase SLT domain 194 315 7.6E-34 T 15-10-2018 IPR008258 Transglycosylase SLT domain 1 AM378_15650 ac014d54345dba3b91b25f663f83fcc4 358 Gene3D G3DSA:1.10.530.10 177 354 4.4E-52 T 15-10-2018 AM378_15650 ac014d54345dba3b91b25f663f83fcc4 358 SUPERFAMILY SSF53955 153 357 1.75E-39 T 15-10-2018 IPR023346 Lysozyme-like domain superfamily AM378_15650 ac014d54345dba3b91b25f663f83fcc4 358 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 212 240 - T 15-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 AM378_15650 ac014d54345dba3b91b25f663f83fcc4 358 Hamap MF_01616 Membrane-bound lytic murein transglycosylase C [mltC]. 1 357 61.015 T 15-10-2018 IPR023664 Murein transglycosylase-C GO:0009279|GO:0016798|GO:0016998 AM378_15650 ac014d54345dba3b91b25f663f83fcc4 358 Pfam PF11873 Domain of unknown function (DUF3393) 3 190 2.0E-77 T 15-10-2018 IPR024570 Murein transglycosylase-C, N-terminal AM378_16630 2a9c33c1b83b244feb9bd40fdc8c9b26 328 SMART SM00116 215 263 9.3 T 15-10-2018 IPR000644 CBS domain AM378_16630 2a9c33c1b83b244feb9bd40fdc8c9b26 328 SMART SM00116 280 327 0.68 T 15-10-2018 IPR000644 CBS domain AM378_16630 2a9c33c1b83b244feb9bd40fdc8c9b26 328 Gene3D G3DSA:3.40.50.10490 11 200 5.9E-65 T 15-10-2018 AM378_16630 2a9c33c1b83b244feb9bd40fdc8c9b26 328 Pfam PF00571 CBS domain 274 325 7.0E-6 T 15-10-2018 IPR000644 CBS domain AM378_16630 2a9c33c1b83b244feb9bd40fdc8c9b26 328 Pfam PF00571 CBS domain 206 261 8.3E-6 T 15-10-2018 IPR000644 CBS domain AM378_16630 2a9c33c1b83b244feb9bd40fdc8c9b26 328 PIRSF PIRSF004692 1 328 2.6E-134 T 15-10-2018 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 AM378_16630 2a9c33c1b83b244feb9bd40fdc8c9b26 328 Gene3D G3DSA:3.10.580.10 201 325 1.6E-47 T 15-10-2018 AM378_16630 2a9c33c1b83b244feb9bd40fdc8c9b26 328 TIGRFAM TIGR00393 kpsF: sugar isomerase, KpsF/GutQ family 50 318 1.1E-124 T 15-10-2018 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 AM378_16630 2a9c33c1b83b244feb9bd40fdc8c9b26 328 Pfam PF01380 SIS domain 50 177 3.4E-32 T 15-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 AM378_16630 2a9c33c1b83b244feb9bd40fdc8c9b26 328 SUPERFAMILY SSF53697 13 297 6.9E-68 T 15-10-2018 AM378_14395 a4782722cac4b37b395e8e00d97d8386 367 Gene3D G3DSA:3.30.2300.20 80 175 1.2E-38 T 15-10-2018 AM378_14395 a4782722cac4b37b395e8e00d97d8386 367 Hamap MF_01551 Ribosomal RNA large subunit methyltransferase M [rlmM]. 1 355 85.318 T 15-10-2018 IPR011224 Ribosomal RNA large subunit methyltransferase M GO:0008168 AM378_14395 a4782722cac4b37b395e8e00d97d8386 367 Gene3D G3DSA:3.30.70.2810 1 79 1.1E-35 T 15-10-2018 AM378_14395 a4782722cac4b37b395e8e00d97d8386 367 SUPERFAMILY SSF53335 184 295 2.91E-13 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM378_14395 a4782722cac4b37b395e8e00d97d8386 367 Gene3D G3DSA:3.40.50.150 176 357 1.5E-57 T 15-10-2018 AM378_14395 a4782722cac4b37b395e8e00d97d8386 367 Pfam PF01728 FtsJ-like methyltransferase 186 267 4.0E-8 T 15-10-2018 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 AM378_14395 a4782722cac4b37b395e8e00d97d8386 367 PIRSF PIRSF028774 1 360 1.8E-188 T 15-10-2018 IPR011224 Ribosomal RNA large subunit methyltransferase M GO:0008168 AM378_23110 24abbbfc61e895718022cc2cdd68bf6e 240 SMART SM00382 26 213 2.1E-14 T 15-10-2018 IPR003593 AAA+ ATPase domain AM378_23110 24abbbfc61e895718022cc2cdd68bf6e 240 PIRSF PIRSF039085 1 240 2.0E-119 T 15-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 AM378_23110 24abbbfc61e895718022cc2cdd68bf6e 240 Gene3D G3DSA:3.40.50.300 1 240 2.1E-78 T 15-10-2018 AM378_23110 24abbbfc61e895718022cc2cdd68bf6e 240 Pfam PF00005 ABC transporter 17 165 8.7E-35 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM378_23110 24abbbfc61e895718022cc2cdd68bf6e 240 SUPERFAMILY SSF52540 1 235 2.03E-79 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_23110 24abbbfc61e895718022cc2cdd68bf6e 240 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM378_17945 01da81c2587affd94543f56d40da0003 94 SUPERFAMILY SSF159871 4 91 3.14E-23 T 15-10-2018 IPR036275 YdgH-like superfamily AM378_17945 01da81c2587affd94543f56d40da0003 94 Pfam PF07338 Protein of unknown function (DUF1471) 38 91 7.3E-19 T 15-10-2018 IPR010854 Domain of unknown function DUF1471 AM378_17945 01da81c2587affd94543f56d40da0003 94 Gene3D G3DSA:3.30.1660.10 22 93 5.3E-26 T 15-10-2018 IPR025543 Dodecin-like AM378_11590 07d1ecb6017269f114ecad4195c6d091 376 ProSitePatterns PS00576 General diffusion Gram-negative porins signature. 328 344 - T 15-10-2018 IPR013793 Porin, Gram-negative type, conserved site AM378_11590 07d1ecb6017269f114ecad4195c6d091 376 SUPERFAMILY SSF56935 22 376 4.19E-76 T 15-10-2018 AM378_11590 07d1ecb6017269f114ecad4195c6d091 376 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 52 63 3.1E-16 T 15-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 AM378_11590 07d1ecb6017269f114ecad4195c6d091 376 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 328 345 3.1E-16 T 15-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 AM378_11590 07d1ecb6017269f114ecad4195c6d091 376 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 151 162 3.1E-16 T 15-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 AM378_11590 07d1ecb6017269f114ecad4195c6d091 376 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 95 105 3.1E-16 T 15-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 AM378_11590 07d1ecb6017269f114ecad4195c6d091 376 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 238 250 3.1E-16 T 15-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 AM378_11590 07d1ecb6017269f114ecad4195c6d091 376 PRINTS PR00183 E.coli/Salmonella-type porin signature 95 117 1.9E-67 T 15-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 AM378_11590 07d1ecb6017269f114ecad4195c6d091 376 PRINTS PR00183 E.coli/Salmonella-type porin signature 149 171 1.9E-67 T 15-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 AM378_11590 07d1ecb6017269f114ecad4195c6d091 376 PRINTS PR00183 E.coli/Salmonella-type porin signature 278 297 1.9E-67 T 15-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 AM378_11590 07d1ecb6017269f114ecad4195c6d091 376 PRINTS PR00183 E.coli/Salmonella-type porin signature 244 261 1.9E-67 T 15-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 AM378_11590 07d1ecb6017269f114ecad4195c6d091 376 PRINTS PR00183 E.coli/Salmonella-type porin signature 51 69 1.9E-67 T 15-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 AM378_11590 07d1ecb6017269f114ecad4195c6d091 376 PRINTS PR00183 E.coli/Salmonella-type porin signature 22 38 1.9E-67 T 15-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 AM378_11590 07d1ecb6017269f114ecad4195c6d091 376 Gene3D G3DSA:2.40.160.10 22 376 1.1E-139 T 15-10-2018 IPR023614 Porin domain superfamily AM378_11590 07d1ecb6017269f114ecad4195c6d091 376 Pfam PF00267 Gram-negative porin 27 376 4.2E-129 T 15-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 AM378_12255 c16fde436ddeb876a43a2d398b13a219 83 Gene3D G3DSA:1.10.1470.10 1 60 5.3E-10 T 15-10-2018 IPR036629 YjbJ superfamily AM378_12255 c16fde436ddeb876a43a2d398b13a219 83 Pfam PF05532 CsbD-like 4 50 1.7E-14 T 15-10-2018 IPR008462 CsbD-like domain AM378_12255 c16fde436ddeb876a43a2d398b13a219 83 SUPERFAMILY SSF69047 1 51 1.96E-12 T 15-10-2018 IPR036629 YjbJ superfamily AM378_22305 e1640e1a8b68cd0570d3a4db09ad7e2a 61 Gene3D G3DSA:1.10.1470.10 1 60 1.2E-14 T 15-10-2018 IPR036629 YjbJ superfamily AM378_22305 e1640e1a8b68cd0570d3a4db09ad7e2a 61 SUPERFAMILY SSF69047 1 58 6.41E-15 T 15-10-2018 IPR036629 YjbJ superfamily AM378_02270 28f8a414ad76dfc93bb6a7a77b0e3a8c 290 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 9.8E-10 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_02270 28f8a414ad76dfc93bb6a7a77b0e3a8c 290 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 9.8E-10 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_02270 28f8a414ad76dfc93bb6a7a77b0e3a8c 290 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 9.8E-10 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_02270 28f8a414ad76dfc93bb6a7a77b0e3a8c 290 Gene3D G3DSA:1.10.10.10 1 91 1.8E-27 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_02270 28f8a414ad76dfc93bb6a7a77b0e3a8c 290 SUPERFAMILY SSF53850 89 284 3.57E-25 T 15-10-2018 AM378_02270 28f8a414ad76dfc93bb6a7a77b0e3a8c 290 Gene3D G3DSA:3.40.190.10 92 281 1.7E-39 T 15-10-2018 AM378_02270 28f8a414ad76dfc93bb6a7a77b0e3a8c 290 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 2.0E-21 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_02270 28f8a414ad76dfc93bb6a7a77b0e3a8c 290 SUPERFAMILY SSF46785 1 84 4.13E-22 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM378_02270 28f8a414ad76dfc93bb6a7a77b0e3a8c 290 Pfam PF03466 LysR substrate binding domain 88 284 4.6E-27 T 15-10-2018 IPR005119 LysR, substrate-binding AM378_02270 28f8a414ad76dfc93bb6a7a77b0e3a8c 290 Gene3D G3DSA:3.40.190.10 160 263 1.7E-39 T 15-10-2018 AM378_12435 600613b323d777bbbc1bc6add247c155 348 Gene3D G3DSA:2.60.40.1090 215 348 1.1E-27 T 15-10-2018 IPR036937 Fimbrial-type adhesion domain superfamily GO:0007155|GO:0009289 AM378_12435 600613b323d777bbbc1bc6add247c155 348 Pfam PF00419 Fimbrial protein 212 347 1.1E-12 T 15-10-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM378_12435 600613b323d777bbbc1bc6add247c155 348 SUPERFAMILY SSF49401 217 347 2.19E-21 T 15-10-2018 IPR008966 Adhesion domain superfamily AM378_10200 8d8d9f4daf29580fc9810d9c76f8b126 232 PRINTS PR01837 MgtC/SapB protein signature 32 50 5.8E-45 T 15-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 AM378_10200 8d8d9f4daf29580fc9810d9c76f8b126 232 PRINTS PR01837 MgtC/SapB protein signature 84 108 5.8E-45 T 15-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 AM378_10200 8d8d9f4daf29580fc9810d9c76f8b126 232 PRINTS PR01837 MgtC/SapB protein signature 57 79 5.8E-45 T 15-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 AM378_10200 8d8d9f4daf29580fc9810d9c76f8b126 232 PRINTS PR01837 MgtC/SapB protein signature 13 32 5.8E-45 T 15-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 AM378_10200 8d8d9f4daf29580fc9810d9c76f8b126 232 Pfam PF02308 MgtC family 10 129 3.3E-37 T 15-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 AM378_10200 8d8d9f4daf29580fc9810d9c76f8b126 232 Gene3D G3DSA:3.30.70.260 139 230 7.8E-15 T 15-10-2018 AM378_07940 8e801ceda7e986e09765aafc0efa0802 108 Pfam PF01253 Translation initiation factor SUI1 32 101 9.5E-19 T 15-10-2018 IPR001950 SUI1 domain GO:0003743|GO:0006413 AM378_07940 8e801ceda7e986e09765aafc0efa0802 108 TIGRFAM TIGR01158 SUI1_rel: putative translation initiation factor SUI1 8 108 2.1E-37 T 15-10-2018 IPR005872 Archaeal/bacterial translation initiation factor SUI1 GO:0003743 AM378_07940 8e801ceda7e986e09765aafc0efa0802 108 Gene3D G3DSA:3.30.780.10 28 108 6.4E-34 T 15-10-2018 AM378_07940 8e801ceda7e986e09765aafc0efa0802 108 PIRSF PIRSF037511 1 108 1.9E-34 T 15-10-2018 IPR005872 Archaeal/bacterial translation initiation factor SUI1 GO:0003743 AM378_07940 8e801ceda7e986e09765aafc0efa0802 108 SUPERFAMILY SSF55159 5 104 1.57E-25 T 15-10-2018 IPR036877 SUI1 domain superfamily GO:0003743|GO:0006413 AM378_23875 6ba07b5b75a7d051535aa482743768bb 351 SUPERFAMILY SSF46767 268 348 6.28E-30 T 15-10-2018 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain Reactome: R-HSA-5657655 AM378_23875 6ba07b5b75a7d051535aa482743768bb 351 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 319 325 - T 15-10-2018 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 Reactome: R-HSA-5657655 AM378_23875 6ba07b5b75a7d051535aa482743768bb 351 Gene3D G3DSA:1.10.10.10 268 351 1.3E-34 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_23875 6ba07b5b75a7d051535aa482743768bb 351 Gene3D G3DSA:3.30.160.70 175 267 1.6E-32 T 15-10-2018 AM378_23875 6ba07b5b75a7d051535aa482743768bb 351 SUPERFAMILY SSF46689 84 131 3.94E-9 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AM378_23875 6ba07b5b75a7d051535aa482743768bb 351 SUPERFAMILY SSF53155 187 267 1.43E-19 T 15-10-2018 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily GO:0003908|GO:0006281 Reactome: R-HSA-5657655 AM378_23875 6ba07b5b75a7d051535aa482743768bb 351 Pfam PF12833 Helix-turn-helix domain 105 182 1.6E-17 T 15-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM378_23875 6ba07b5b75a7d051535aa482743768bb 351 Gene3D G3DSA:1.10.10.60 79 146 1.1E-21 T 15-10-2018 AM378_23875 6ba07b5b75a7d051535aa482743768bb 351 PIRSF PIRSF000409 1 351 2.1E-139 T 15-10-2018 IPR016221 Bifunctional regulatory protein Ada AM378_23875 6ba07b5b75a7d051535aa482743768bb 351 SMART SM00342 99 181 3.3E-15 T 15-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM378_23875 6ba07b5b75a7d051535aa482743768bb 351 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 270 349 5.4E-32 T 15-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 AM378_23875 6ba07b5b75a7d051535aa482743768bb 351 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 269 348 3.9E-35 T 15-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 AM378_23875 6ba07b5b75a7d051535aa482743768bb 351 Gene3D G3DSA:3.40.10.10 1 74 3.6E-31 T 15-10-2018 IPR035451 Ada-like domain superfamily AM378_23875 6ba07b5b75a7d051535aa482743768bb 351 SUPERFAMILY SSF57884 5 91 1.57E-31 T 15-10-2018 IPR035451 Ada-like domain superfamily AM378_23875 6ba07b5b75a7d051535aa482743768bb 351 Pfam PF02805 Metal binding domain of Ada 11 72 8.7E-32 T 15-10-2018 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 AM378_11600 75b34309a94aad23027263c93f2e941d 384 SUPERFAMILY SSF103473 20 378 6.93E-35 T 15-10-2018 IPR036259 MFS transporter superfamily AM378_11600 75b34309a94aad23027263c93f2e941d 384 Gene3D G3DSA:1.20.1250.20 15 195 7.2E-12 T 15-10-2018 AM378_11600 75b34309a94aad23027263c93f2e941d 384 Gene3D G3DSA:1.20.1250.20 202 382 8.8E-21 T 15-10-2018 AM378_11600 75b34309a94aad23027263c93f2e941d 384 Pfam PF07690 Major Facilitator Superfamily 22 322 1.7E-13 T 15-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM378_07285 54f338518997ae6ef4af74b321ec46c9 576 Pfam PF00005 ABC transporter 318 443 2.4E-16 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM378_07285 54f338518997ae6ef4af74b321ec46c9 576 SUPERFAMILY SSF52540 317 501 2.32E-34 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_07285 54f338518997ae6ef4af74b321ec46c9 576 SUPERFAMILY SSF52540 11 203 2.34E-42 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_07285 54f338518997ae6ef4af74b321ec46c9 576 ProSitePatterns PS00211 ABC transporters family signature. 415 429 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM378_07285 54f338518997ae6ef4af74b321ec46c9 576 Gene3D G3DSA:3.40.50.300 3 236 3.7E-52 T 15-10-2018 AM378_07285 54f338518997ae6ef4af74b321ec46c9 576 Pfam PF00005 ABC transporter 20 154 3.1E-25 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM378_07285 54f338518997ae6ef4af74b321ec46c9 576 SMART SM00382 322 488 1.3E-6 T 15-10-2018 IPR003593 AAA+ ATPase domain AM378_07285 54f338518997ae6ef4af74b321ec46c9 576 SMART SM00382 29 236 1.5E-10 T 15-10-2018 IPR003593 AAA+ ATPase domain AM378_07285 54f338518997ae6ef4af74b321ec46c9 576 Gene3D G3DSA:3.40.50.300 304 501 1.7E-41 T 15-10-2018 AM378_10625 d26eb90cd545d8553fab26683cdfa5a0 266 SUPERFAMILY SSF55486 36 248 9.52E-41 T 15-10-2018 AM378_10625 d26eb90cd545d8553fab26683cdfa5a0 266 Hamap MF_01593 Protein MtfA [mtfA]. 1 266 59.776 T 15-10-2018 IPR010384 MtfA family AM378_10625 d26eb90cd545d8553fab26683cdfa5a0 266 Pfam PF06167 Glucose-regulated metallo-peptidase M90 12 246 2.0E-65 T 15-10-2018 IPR010384 MtfA family AM378_10625 d26eb90cd545d8553fab26683cdfa5a0 266 Gene3D G3DSA:3.40.390.10 143 265 8.4E-43 T 15-10-2018 IPR024079 Metallopeptidase, catalytic domain superfamily GO:0008237 AM378_10625 d26eb90cd545d8553fab26683cdfa5a0 266 Gene3D G3DSA:1.10.472.150 18 142 2.8E-43 T 15-10-2018 AM378_20780 00932729ad6b86c0fc30777e1d007ce5 438 ProSitePatterns PS00714 Sodium:dicarboxylate symporter family signature 2. 306 329 - T 15-10-2018 IPR018107 Sodium:dicarboxylate symporter, conserved site AM378_20780 00932729ad6b86c0fc30777e1d007ce5 438 Gene3D G3DSA:1.10.3860.10 1 428 9.9E-139 T 15-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 AM378_20780 00932729ad6b86c0fc30777e1d007ce5 438 ProSitePatterns PS00713 Sodium:dicarboxylate symporter family signature 1. 43 58 - T 15-10-2018 IPR018107 Sodium:dicarboxylate symporter, conserved site AM378_20780 00932729ad6b86c0fc30777e1d007ce5 438 Hamap MF_02063 Proton/glutamate-aspartate symporter [gltP]. 1 428 46.072 T 15-10-2018 IPR034703 Proton/glutamate-aspartate symporter GltP GO:0006835|GO:0015293|GO:0016021 AM378_20780 00932729ad6b86c0fc30777e1d007ce5 438 PRINTS PR00173 Glutamate-aspartate symporter signature 338 357 2.7E-53 T 15-10-2018 AM378_20780 00932729ad6b86c0fc30777e1d007ce5 438 PRINTS PR00173 Glutamate-aspartate symporter signature 203 222 2.7E-53 T 15-10-2018 AM378_20780 00932729ad6b86c0fc30777e1d007ce5 438 PRINTS PR00173 Glutamate-aspartate symporter signature 6 26 2.7E-53 T 15-10-2018 AM378_20780 00932729ad6b86c0fc30777e1d007ce5 438 PRINTS PR00173 Glutamate-aspartate symporter signature 365 385 2.7E-53 T 15-10-2018 AM378_20780 00932729ad6b86c0fc30777e1d007ce5 438 PRINTS PR00173 Glutamate-aspartate symporter signature 51 71 2.7E-53 T 15-10-2018 AM378_20780 00932729ad6b86c0fc30777e1d007ce5 438 PRINTS PR00173 Glutamate-aspartate symporter signature 81 106 2.7E-53 T 15-10-2018 AM378_20780 00932729ad6b86c0fc30777e1d007ce5 438 PRINTS PR00173 Glutamate-aspartate symporter signature 303 329 2.7E-53 T 15-10-2018 AM378_20780 00932729ad6b86c0fc30777e1d007ce5 438 PRINTS PR00173 Glutamate-aspartate symporter signature 155 177 2.7E-53 T 15-10-2018 AM378_20780 00932729ad6b86c0fc30777e1d007ce5 438 Pfam PF00375 Sodium:dicarboxylate symporter family 8 411 4.1E-119 T 15-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AM378_20780 00932729ad6b86c0fc30777e1d007ce5 438 SUPERFAMILY SSF118215 8 412 1.83E-125 T 15-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 AM378_02105 09f70c4154f6c8d6b82ca66604adfac0 218 Pfam PF14497 Glutathione S-transferase, C-terminal domain 129 207 5.3E-5 T 15-10-2018 IPR004046 Glutathione S-transferase, C-terminal AM378_02105 09f70c4154f6c8d6b82ca66604adfac0 218 Gene3D G3DSA:3.40.30.10 7 84 2.3E-42 T 15-10-2018 AM378_02105 09f70c4154f6c8d6b82ca66604adfac0 218 SUPERFAMILY SSF47616 88 205 2.27E-15 T 15-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily AM378_02105 09f70c4154f6c8d6b82ca66604adfac0 218 SUPERFAMILY SSF52833 4 87 3.62E-13 T 15-10-2018 IPR036249 Thioredoxin-like superfamily AM378_02105 09f70c4154f6c8d6b82ca66604adfac0 218 Gene3D G3DSA:1.20.1050.10 85 199 2.3E-42 T 15-10-2018 AM378_02105 09f70c4154f6c8d6b82ca66604adfac0 218 Pfam PF13417 Glutathione S-transferase, N-terminal domain 8 81 6.1E-9 T 15-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AM378_23540 7aa21cbacb3eba3e00e3b6cbd212af14 193 Pfam PF13580 SIS domain 13 146 4.4E-31 T 15-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 AM378_23540 7aa21cbacb3eba3e00e3b6cbd212af14 193 TIGRFAM TIGR00441 gmhA: phosphoheptose isomerase 35 187 4.3E-83 T 15-10-2018 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478 AM378_23540 7aa21cbacb3eba3e00e3b6cbd212af14 193 Hamap MF_00067 Phosphoheptose isomerase [gmhA]. 1 190 38.154 T 15-10-2018 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478 AM378_23540 7aa21cbacb3eba3e00e3b6cbd212af14 193 Gene3D G3DSA:3.40.50.10490 1 192 1.4E-71 T 15-10-2018 AM378_23540 7aa21cbacb3eba3e00e3b6cbd212af14 193 SUPERFAMILY SSF53697 1 189 3.03E-51 T 15-10-2018 AM378_17800 27bbb44447664a1e5c1fa001a0ee207c 232 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 70 187 3.3E-11 T 15-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AM378_17800 27bbb44447664a1e5c1fa001a0ee207c 232 SUPERFAMILY SSF56784 6 222 1.73E-60 T 15-10-2018 IPR036412 HAD-like superfamily AM378_17800 27bbb44447664a1e5c1fa001a0ee207c 232 Hamap MF_00495 Phosphoglycolate phosphatase [gph]. 7 223 38.63 T 15-10-2018 IPR037512 Phosphoglycolate phosphatase, prokaryotic GO:0005975|GO:0008967 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181 AM378_17800 27bbb44447664a1e5c1fa001a0ee207c 232 Pfam PF13419 Haloacid dehalogenase-like hydrolase 12 192 1.1E-37 T 15-10-2018 AM378_17800 27bbb44447664a1e5c1fa001a0ee207c 232 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 81 192 7.8E-10 T 15-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AM378_17800 27bbb44447664a1e5c1fa001a0ee207c 232 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 155 175 4.6E-11 T 15-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AM378_17800 27bbb44447664a1e5c1fa001a0ee207c 232 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 137 153 4.6E-11 T 15-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AM378_17800 27bbb44447664a1e5c1fa001a0ee207c 232 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 7 18 4.6E-11 T 15-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AM378_17800 27bbb44447664a1e5c1fa001a0ee207c 232 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 106 119 4.6E-11 T 15-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AM378_17800 27bbb44447664a1e5c1fa001a0ee207c 232 TIGRFAM TIGR01449 PGP_bact: phosphoglycolate phosphatase, bacterial 11 222 3.1E-79 T 15-10-2018 IPR006346 2-phosphoglycolate phosphatase-like, prokaryotic GO:0016791 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181 AM378_17800 27bbb44447664a1e5c1fa001a0ee207c 232 Gene3D G3DSA:1.10.150.240 22 92 1.1E-67 T 15-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 AM378_17800 27bbb44447664a1e5c1fa001a0ee207c 232 Gene3D G3DSA:3.40.50.1000 10 215 1.1E-67 T 15-10-2018 IPR023214 HAD superfamily AM378_08830 4238bbf9a2fdf67b6787891dbb37a0de 69 SUPERFAMILY SSF50249 3 68 2.4E-25 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold AM378_08830 4238bbf9a2fdf67b6787891dbb37a0de 69 SMART SM00357 5 69 9.4E-30 T 15-10-2018 IPR011129 Cold shock domain GO:0003676 AM378_08830 4238bbf9a2fdf67b6787891dbb37a0de 69 PRINTS PR00050 Cold shock protein signature 6 21 7.8E-17 T 15-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AM378_08830 4238bbf9a2fdf67b6787891dbb37a0de 69 PRINTS PR00050 Cold shock protein signature 42 60 7.8E-17 T 15-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AM378_08830 4238bbf9a2fdf67b6787891dbb37a0de 69 PRINTS PR00050 Cold shock protein signature 27 36 7.8E-17 T 15-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AM378_08830 4238bbf9a2fdf67b6787891dbb37a0de 69 PIRSF PIRSF002599 1 69 1.5E-24 T 15-10-2018 IPR012156 Cold shock, CspA GO:0003676 AM378_08830 4238bbf9a2fdf67b6787891dbb37a0de 69 Gene3D G3DSA:2.40.50.140 1 68 9.9E-31 T 15-10-2018 AM378_08830 4238bbf9a2fdf67b6787891dbb37a0de 69 ProSitePatterns PS00352 'Cold-shock' domain signature. 17 36 - T 15-10-2018 IPR019844 Cold-shock conserved site AM378_08830 4238bbf9a2fdf67b6787891dbb37a0de 69 Pfam PF00313 'Cold-shock' DNA-binding domain 5 68 8.1E-32 T 15-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AM378_04840 967ac36dc16f8c3e9b66fb6a9e49254b 132 PIRSF PIRSF005610 1 124 4.1E-26 T 15-10-2018 IPR007360 Invasion gene expression up-regulator, SirB AM378_04840 967ac36dc16f8c3e9b66fb6a9e49254b 132 Pfam PF04247 Invasion gene expression up-regulator, SirB 4 126 2.6E-42 T 15-10-2018 IPR007360 Invasion gene expression up-regulator, SirB AM378_15260 81fbe456e3a042a8b59198ff7a547783 174 Gene3D G3DSA:2.60.120.10 44 173 5.4E-19 T 15-10-2018 IPR014710 RmlC-like jelly roll fold AM378_15260 81fbe456e3a042a8b59198ff7a547783 174 SUPERFAMILY SSF51182 28 168 1.82E-22 T 15-10-2018 IPR011051 RmlC-like cupin domain superfamily AM378_15260 81fbe456e3a042a8b59198ff7a547783 174 Pfam PF07883 Cupin domain 81 148 1.1E-11 T 15-10-2018 IPR013096 Cupin 2, conserved barrel AM378_20735 01cffc042c37479aab2988f674726b14 529 SMART SM00851 19 132 2.1E-62 T 15-10-2018 IPR011607 Methylglyoxal synthase-like domain AM378_20735 01cffc042c37479aab2988f674726b14 529 Pfam PF02142 MGS-like domain 19 132 2.2E-30 T 15-10-2018 IPR011607 Methylglyoxal synthase-like domain AM378_20735 01cffc042c37479aab2988f674726b14 529 Gene3D G3DSA:3.40.50.1380 5 196 1.2E-86 T 15-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily AM378_20735 01cffc042c37479aab2988f674726b14 529 PIRSF PIRSF000414 1 529 1.3E-229 T 15-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AM378_20735 01cffc042c37479aab2988f674726b14 529 Gene3D G3DSA:3.40.140.20 218 374 1.4E-58 T 15-10-2018 IPR024051 AICAR transformylase, duplicated domain superfamily KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AM378_20735 01cffc042c37479aab2988f674726b14 529 SMART SM00798 137 461 2.3E-216 T 15-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AM378_20735 01cffc042c37479aab2988f674726b14 529 TIGRFAM TIGR00355 purH: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 8 529 1.7E-264 T 15-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AM378_20735 01cffc042c37479aab2988f674726b14 529 Pfam PF01808 AICARFT/IMPCHase bienzyme 137 460 1.4E-119 T 15-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AM378_20735 01cffc042c37479aab2988f674726b14 529 Gene3D G3DSA:3.40.140.20 392 529 2.9E-58 T 15-10-2018 IPR024051 AICAR transformylase, duplicated domain superfamily KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AM378_20735 01cffc042c37479aab2988f674726b14 529 Hamap MF_00139 Bifunctional purine biosynthesis protein PurH [purH]. 7 529 45.649 T 15-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AM378_20735 01cffc042c37479aab2988f674726b14 529 SUPERFAMILY SSF53927 221 529 5.82E-131 T 15-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 AM378_20735 01cffc042c37479aab2988f674726b14 529 SUPERFAMILY SSF52335 7 196 5.76E-72 T 15-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily AM378_13155 3d52f2c9ba73a0c5fc39aa2dc075d151 259 Gene3D G3DSA:3.40.50.720 1 258 6.8E-62 T 15-10-2018 AM378_13155 3d52f2c9ba73a0c5fc39aa2dc075d151 259 SUPERFAMILY SSF51735 4 258 4.09E-64 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily AM378_13155 3d52f2c9ba73a0c5fc39aa2dc075d151 259 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 141 169 - T 15-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AM378_13155 3d52f2c9ba73a0c5fc39aa2dc075d151 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 1.1E-17 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_13155 3d52f2c9ba73a0c5fc39aa2dc075d151 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 220 240 1.1E-17 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_13155 3d52f2c9ba73a0c5fc39aa2dc075d151 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 1.1E-17 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_13155 3d52f2c9ba73a0c5fc39aa2dc075d151 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 1.1E-17 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_13155 3d52f2c9ba73a0c5fc39aa2dc075d151 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 1.1E-17 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_13155 3d52f2c9ba73a0c5fc39aa2dc075d151 259 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 1.9E-7 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_13155 3d52f2c9ba73a0c5fc39aa2dc075d151 259 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 1.9E-7 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_13155 3d52f2c9ba73a0c5fc39aa2dc075d151 259 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 1.9E-7 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_13155 3d52f2c9ba73a0c5fc39aa2dc075d151 259 Pfam PF00106 short chain dehydrogenase 4 197 1.4E-46 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_09125 b360d2633a8d27803aaf3ae00a2d7929 514 Gene3D G3DSA:3.30.70.20 1 298 2.6E-100 T 15-10-2018 AM378_09125 b360d2633a8d27803aaf3ae00a2d7929 514 Gene3D G3DSA:1.10.3650.10 358 434 2.5E-33 T 15-10-2018 IPR038262 Nitrate reductase beta, C-terminal domain superfamily KEGG: 00910+1.7.5.1|MetaCyc: PWY-6748 AM378_09125 b360d2633a8d27803aaf3ae00a2d7929 514 TIGRFAM TIGR01660 narH: nitrate reductase, beta subunit 1 491 1.7E-303 T 15-10-2018 IPR006547 Nitrate reductase, beta subunit GO:0008940|GO:0009325|GO:0042126|GO:0055114 KEGG: 00910+1.7.5.1|MetaCyc: PWY-6748 AM378_09125 b360d2633a8d27803aaf3ae00a2d7929 514 SUPERFAMILY SSF54862 1 502 2.09E-181 T 15-10-2018 AM378_09125 b360d2633a8d27803aaf3ae00a2d7929 514 Pfam PF14711 Respiratory nitrate reductase beta C-terminal 358 436 2.5E-30 T 15-10-2018 IPR029263 Respiratory nitrate reductase beta, C-terminal KEGG: 00910+1.7.5.1|MetaCyc: PWY-6748 AM378_09125 b360d2633a8d27803aaf3ae00a2d7929 514 Pfam PF13247 4Fe-4S dicluster domain 175 271 1.0E-36 T 15-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AM378_20350 62618a17d7a558c23fa6b5b28309ac7c 256 SMART SM00382 31 231 1.2E-6 T 15-10-2018 IPR003593 AAA+ ATPase domain AM378_20350 62618a17d7a558c23fa6b5b28309ac7c 256 ProSitePatterns PS00211 ABC transporters family signature. 155 169 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM378_20350 62618a17d7a558c23fa6b5b28309ac7c 256 SUPERFAMILY SSF52540 5 254 1.2E-62 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_20350 62618a17d7a558c23fa6b5b28309ac7c 256 Pfam PF00005 ABC transporter 22 182 7.2E-33 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM378_20350 62618a17d7a558c23fa6b5b28309ac7c 256 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 234 254 4.7E-11 T 15-10-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal AM378_20350 62618a17d7a558c23fa6b5b28309ac7c 256 Gene3D G3DSA:3.40.50.300 5 254 2.4E-62 T 15-10-2018 AM378_03295 48a8fe08d5df6dfac8dad9261db5514d 336 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 232 2.4E-28 T 15-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 AM378_03295 48a8fe08d5df6dfac8dad9261db5514d 336 SUPERFAMILY SSF51735 1 332 3.36E-62 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily AM378_03295 48a8fe08d5df6dfac8dad9261db5514d 336 Gene3D G3DSA:3.40.50.720 1 331 7.3E-62 T 15-10-2018 AM378_06320 3311a6f9c2ccf8032ce8781c1cfca8db 250 Hamap MF_00943 Maleate isomerase [maiA]. 5 250 50.619 T 15-10-2018 IPR028615 Maleate isomerase GO:0050076 KEGG: 00650+5.2.1.1|KEGG: 00760+5.2.1.1|MetaCyc: PWY-5033|MetaCyc: PWY-6993|MetaCyc: PWY-7128|MetaCyc: PWY-722 AM378_06320 3311a6f9c2ccf8032ce8781c1cfca8db 250 Gene3D G3DSA:3.40.50.12500 5 250 2.2E-87 T 15-10-2018 AM378_06320 3311a6f9c2ccf8032ce8781c1cfca8db 250 PIRSF PIRSF015736 1 250 9.9E-68 T 15-10-2018 IPR026286 Maleate isomerase/Arylmalonate decarboxylase AM378_05630 bb422243750fdede3f2691e585c53e53 345 SUPERFAMILY SSF144064 4 338 6.57E-132 T 15-10-2018 AM378_05630 bb422243750fdede3f2691e585c53e53 345 Pfam PF05171 Haemin-degrading HemS.ChuX domain 29 156 4.5E-42 T 15-10-2018 IPR007845 Haemin-degrading HemS/ChuX domain GO:0006826 AM378_05630 bb422243750fdede3f2691e585c53e53 345 Pfam PF05171 Haemin-degrading HemS.ChuX domain 206 338 6.2E-43 T 15-10-2018 IPR007845 Haemin-degrading HemS/ChuX domain GO:0006826 AM378_05630 bb422243750fdede3f2691e585c53e53 345 Gene3D G3DSA:3.40.1570.10 15 281 1.1E-133 T 15-10-2018 AM378_05630 bb422243750fdede3f2691e585c53e53 345 Gene3D G3DSA:3.40.1570.10 82 332 1.1E-133 T 15-10-2018 AM378_09930 1ec1eb46d7b90cb228a3422797e4add2 343 Pfam PF06812 ImpA, N-terminal, type VI secretion system 9 132 2.7E-39 T 15-10-2018 IPR010657 ImpA, N-terminal AM378_09930 1ec1eb46d7b90cb228a3422797e4add2 343 TIGRFAM TIGR03363 VI_chp_8: type VI secretion-associated protein, ImpA family 4 335 4.4E-73 T 15-10-2018 IPR017740 Type VI secretion system-associated, ImpA AM378_06735 86f2c91fa69904749f59a01beb0374b3 412 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 10 313 3.3E-13 T 15-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM378_06735 86f2c91fa69904749f59a01beb0374b3 412 Gene3D G3DSA:3.50.50.60 124 265 6.7E-91 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AM378_06735 86f2c91fa69904749f59a01beb0374b3 412 SUPERFAMILY SSF51905 7 342 1.23E-21 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AM378_06735 86f2c91fa69904749f59a01beb0374b3 412 SUPERFAMILY SSF51905 10 151 1.11E-26 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AM378_06735 86f2c91fa69904749f59a01beb0374b3 412 Gene3D G3DSA:3.50.50.60 12 330 6.7E-91 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AM378_05335 9ed820b6989c39d74335e8c69ac7d4ce 165 SMART SM00065 9 161 3.8E-6 T 15-10-2018 IPR003018 GAF domain GO:0005515 AM378_05335 9ed820b6989c39d74335e8c69ac7d4ce 165 Gene3D G3DSA:3.30.450.40 1 165 1.0E-66 T 15-10-2018 IPR029016 GAF-like domain superfamily AM378_05335 9ed820b6989c39d74335e8c69ac7d4ce 165 SUPERFAMILY SSF55781 2 151 8.1E-41 T 15-10-2018 AM378_05335 9ed820b6989c39d74335e8c69ac7d4ce 165 Pfam PF13185 GAF domain 37 144 1.9E-10 T 15-10-2018 IPR003018 GAF domain GO:0005515 AM378_04505 2a608797e4598d843aef6a015075a47c 488 Pfam PF00854 POT family 82 438 7.9E-32 T 15-10-2018 IPR000109 Proton-dependent oligopeptide transporter family GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-427975 AM378_04505 2a608797e4598d843aef6a015075a47c 488 Gene3D G3DSA:1.20.1250.20 4 480 3.7E-91 T 15-10-2018 AM378_04505 2a608797e4598d843aef6a015075a47c 488 SUPERFAMILY SSF103473 11 478 2.35E-25 T 15-10-2018 IPR036259 MFS transporter superfamily AM378_04505 2a608797e4598d843aef6a015075a47c 488 TIGRFAM TIGR00924 yjdL_sub1_fam: amino acid/peptide transporter (Peptide:H+ symporter) 14 480 3.7E-66 T 15-10-2018 IPR005279 Dipeptide/tripeptide permease GO:0015833|GO:0016020|GO:1904680 AM378_24190 be71ecadfb847a381e86edbfc83e5807 200 Gene3D G3DSA:3.40.30.10 1 197 5.2E-71 T 15-10-2018 AM378_24190 be71ecadfb847a381e86edbfc83e5807 200 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 160 194 6.4E-11 T 15-10-2018 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 AM378_24190 be71ecadfb847a381e86edbfc83e5807 200 Pfam PF00578 AhpC/TSA family 5 139 5.3E-35 T 15-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 AM378_24190 be71ecadfb847a381e86edbfc83e5807 200 SUPERFAMILY SSF52833 1 194 1.22E-64 T 15-10-2018 IPR036249 Thioredoxin-like superfamily AM378_24190 be71ecadfb847a381e86edbfc83e5807 200 PIRSF PIRSF000239 1 199 2.2E-57 T 15-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 AM378_18810 e3664ee854f996b12770f11897454283 232 Gene3D G3DSA:1.10.10.10 132 232 7.9E-29 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_18810 e3664ee854f996b12770f11897454283 232 Gene3D G3DSA:3.40.50.2300 1 131 5.6E-42 T 15-10-2018 AM378_18810 e3664ee854f996b12770f11897454283 232 SUPERFAMILY SSF52172 2 188 7.12E-41 T 15-10-2018 IPR011006 CheY-like superfamily AM378_18810 e3664ee854f996b12770f11897454283 232 SMART SM00862 152 228 7.2E-22 T 15-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AM378_18810 e3664ee854f996b12770f11897454283 232 SMART SM00448 2 111 4.1E-46 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM378_18810 e3664ee854f996b12770f11897454283 232 Pfam PF00486 Transcriptional regulatory protein, C terminal 152 228 1.1E-20 T 15-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AM378_18810 e3664ee854f996b12770f11897454283 232 Pfam PF00072 Response regulator receiver domain 4 112 3.5E-30 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM378_09675 2014a264b7f36b00b3c93c02a10f8a28 319 TIGRFAM TIGR02550 flagell_flgL: flagellar hook-associated protein 3 2 193 3.0E-63 T 15-10-2018 IPR013384 Flagellar hook-associated protein 3 GO:0009424|GO:0071973 AM378_09675 2014a264b7f36b00b3c93c02a10f8a28 319 SUPERFAMILY SSF64518 1 316 3.92E-56 T 15-10-2018 AM378_09675 2014a264b7f36b00b3c93c02a10f8a28 319 Gene3D G3DSA:1.20.1330.10 40 265 5.7E-68 T 15-10-2018 AM378_09675 2014a264b7f36b00b3c93c02a10f8a28 319 Pfam PF00669 Bacterial flagellin N-terminal helical region 3 138 7.8E-24 T 15-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 AM378_19810 f9aec404773405583eb5a10f2ac3ce90 467 SUPERFAMILY SSF51445 4 461 2.98E-163 T 15-10-2018 IPR017853 Glycoside hydrolase superfamily AM378_19810 f9aec404773405583eb5a10f2ac3ce90 467 ProSitePatterns PS00572 Glycosyl hydrolases family 1 active site. 358 366 - T 15-10-2018 IPR018120 Glycoside hydrolase family 1, active site AM378_19810 f9aec404773405583eb5a10f2ac3ce90 467 PRINTS PR00131 Glycosyl hydrolase family 1 signature 358 366 8.2E-16 T 15-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 AM378_19810 f9aec404773405583eb5a10f2ac3ce90 467 PRINTS PR00131 Glycosyl hydrolase family 1 signature 379 390 8.2E-16 T 15-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 AM378_19810 f9aec404773405583eb5a10f2ac3ce90 467 PRINTS PR00131 Glycosyl hydrolase family 1 signature 425 437 8.2E-16 T 15-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 AM378_19810 f9aec404773405583eb5a10f2ac3ce90 467 PRINTS PR00131 Glycosyl hydrolase family 1 signature 400 417 8.2E-16 T 15-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 AM378_19810 f9aec404773405583eb5a10f2ac3ce90 467 PRINTS PR00131 Glycosyl hydrolase family 1 signature 292 306 8.2E-16 T 15-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 AM378_19810 f9aec404773405583eb5a10f2ac3ce90 467 Gene3D G3DSA:3.20.20.80 4 465 1.0E-154 T 15-10-2018 AM378_19810 f9aec404773405583eb5a10f2ac3ce90 467 Pfam PF00232 Glycosyl hydrolase family 1 3 460 1.5E-158 T 15-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 AM378_19810 f9aec404773405583eb5a10f2ac3ce90 467 ProSitePatterns PS00653 Glycosyl hydrolases family 1 N-terminal signature. 9 23 - T 15-10-2018 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site AM378_18945 4fc2b316e5d7da9a82e032009aaac8a5 425 Gene3D G3DSA:3.40.50.2000 217 403 2.4E-69 T 15-10-2018 AM378_18945 4fc2b316e5d7da9a82e032009aaac8a5 425 SUPERFAMILY SSF53756 57 419 2.51E-21 T 15-10-2018 AM378_18945 4fc2b316e5d7da9a82e032009aaac8a5 425 Pfam PF00534 Glycosyl transferases group 1 234 399 9.9E-17 T 15-10-2018 IPR001296 Glycosyl transferase, family 1 AM378_18945 4fc2b316e5d7da9a82e032009aaac8a5 425 Pfam PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) 33 211 2.3E-66 T 15-10-2018 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675 AM378_18945 4fc2b316e5d7da9a82e032009aaac8a5 425 Gene3D G3DSA:3.40.50.11720 40 209 1.0E-46 T 15-10-2018 IPR038107 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal domain superfamily KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675 AM378_09780 c71071f30ea18c578e1de76c4c070686 129 Gene3D G3DSA:3.40.50.2300 2 129 4.2E-39 T 15-10-2018 AM378_09780 c71071f30ea18c578e1de76c4c070686 129 SMART SM00448 6 120 1.7E-35 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM378_09780 c71071f30ea18c578e1de76c4c070686 129 SUPERFAMILY SSF52172 5 125 5.69E-37 T 15-10-2018 IPR011006 CheY-like superfamily AM378_09780 c71071f30ea18c578e1de76c4c070686 129 Pfam PF00072 Response regulator receiver domain 9 120 2.2E-32 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM378_16690 738ed3c7e3b4ee85557e83bf84408368 246 SUPERFAMILY SSF51569 53 221 1.32E-5 T 15-10-2018 AM378_16690 738ed3c7e3b4ee85557e83bf84408368 246 TIGRFAM TIGR03581 EF_0839: conserved hypothetical protein EF_0839/AHA_3917 8 243 8.1E-120 T 15-10-2018 IPR010763 2-dehydro-3-deoxy-phosphogluconate aldolase KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 AM378_16690 738ed3c7e3b4ee85557e83bf84408368 246 Pfam PF07071 KDGP aldolase 8 224 1.5E-110 T 15-10-2018 IPR010763 2-dehydro-3-deoxy-phosphogluconate aldolase KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 AM378_16690 738ed3c7e3b4ee85557e83bf84408368 246 Gene3D G3DSA:3.20.20.70 1 246 4.4E-112 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM378_16450 9aa6b74250268a301ca97e91a34abad1 131 Pfam PF07681 DoxX 8 88 7.6E-17 T 15-10-2018 IPR032808 DoxX family AM378_03000 44a8f6104909537d5a3ab3a4afc3e7b5 165 SUPERFAMILY SSF49401 40 164 4.57E-20 T 15-10-2018 IPR008966 Adhesion domain superfamily AM378_03000 44a8f6104909537d5a3ab3a4afc3e7b5 165 Pfam PF00419 Fimbrial protein 31 164 2.0E-17 T 15-10-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM378_03000 44a8f6104909537d5a3ab3a4afc3e7b5 165 Gene3D G3DSA:2.60.40.1090 43 164 1.4E-33 T 15-10-2018 IPR036937 Fimbrial-type adhesion domain superfamily GO:0007155|GO:0009289 AM378_02240 383a8407def2806b3b6ae8727e78bcf9 167 PIRSF PIRSF005900 8 167 2.2E-41 T 15-10-2018 IPR002177 DNA-binding protein Dps AM378_02240 383a8407def2806b3b6ae8727e78bcf9 167 Hamap MF_01441 DNA protection during starvation protein [dps]. 1 167 44.414 T 15-10-2018 IPR023067 DNA protection during starvation protein, gammaproteobacteria GO:0016722|GO:0055114 AM378_02240 383a8407def2806b3b6ae8727e78bcf9 167 Gene3D G3DSA:1.20.1260.10 1 167 1.4E-52 T 15-10-2018 IPR012347 Ferritin-like AM378_02240 383a8407def2806b3b6ae8727e78bcf9 167 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 51 67 1.3E-12 T 15-10-2018 IPR002177 DNA-binding protein Dps AM378_02240 383a8407def2806b3b6ae8727e78bcf9 167 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 144 162 1.3E-12 T 15-10-2018 IPR002177 DNA-binding protein Dps AM378_02240 383a8407def2806b3b6ae8727e78bcf9 167 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 75 91 1.3E-12 T 15-10-2018 IPR002177 DNA-binding protein Dps AM378_02240 383a8407def2806b3b6ae8727e78bcf9 167 SUPERFAMILY SSF47240 10 167 7.77E-49 T 15-10-2018 IPR009078 Ferritin-like superfamily AM378_02240 383a8407def2806b3b6ae8727e78bcf9 167 ProSitePatterns PS00818 Dps protein family signature 1. 51 67 - T 15-10-2018 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 AM378_02240 383a8407def2806b3b6ae8727e78bcf9 167 Pfam PF00210 Ferritin-like domain 30 166 3.0E-24 T 15-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 AM378_05445 a870b0e497e86e76f196fb0476d2ef7a 296 Pfam PF00005 ABC transporter 28 174 7.4E-30 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM378_05445 a870b0e497e86e76f196fb0476d2ef7a 296 Gene3D G3DSA:3.40.50.300 9 249 2.3E-62 T 15-10-2018 AM378_05445 a870b0e497e86e76f196fb0476d2ef7a 296 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM378_05445 a870b0e497e86e76f196fb0476d2ef7a 296 SUPERFAMILY SSF52540 6 234 4.51E-58 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_05445 a870b0e497e86e76f196fb0476d2ef7a 296 SMART SM00382 36 224 4.2E-11 T 15-10-2018 IPR003593 AAA+ ATPase domain AM378_21175 fe82c14cfbf7cf1b34e45be88eaa8d82 68 Gene3D G3DSA:3.30.1910.10 1 64 1.5E-27 T 15-10-2018 AM378_21175 fe82c14cfbf7cf1b34e45be88eaa8d82 68 Pfam PF06526 Protein of unknown function (DUF1107) 1 61 1.3E-29 T 15-10-2018 IPR009491 Protein of unknown function DUF1107 AM378_21175 fe82c14cfbf7cf1b34e45be88eaa8d82 68 ProDom PD055267 YTFK Y0656 CYTOPLASMIC VP2585 VV0426 ESCHERICHIA S4534 VC2473 YPO3527 COLI 1 65 4.0E-27 T 15-10-2018 IPR009491 Protein of unknown function DUF1107 AM378_05135 28b74dbd5e2e26a4302379103dbc47a2 251 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 242 4.8E-68 T 15-10-2018 AM378_05135 28b74dbd5e2e26a4302379103dbc47a2 251 SUPERFAMILY SSF51735 4 243 4.91E-79 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily AM378_05135 28b74dbd5e2e26a4302379103dbc47a2 251 Gene3D G3DSA:3.40.50.720 1 247 1.9E-79 T 15-10-2018 AM378_05135 28b74dbd5e2e26a4302379103dbc47a2 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 131 139 7.4E-12 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_05135 28b74dbd5e2e26a4302379103dbc47a2 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 151 170 7.4E-12 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_05135 28b74dbd5e2e26a4302379103dbc47a2 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 7.4E-12 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_05135 28b74dbd5e2e26a4302379103dbc47a2 251 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 138 166 - T 15-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AM378_05135 28b74dbd5e2e26a4302379103dbc47a2 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 7.3E-43 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_05135 28b74dbd5e2e26a4302379103dbc47a2 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 125 141 7.3E-43 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_05135 28b74dbd5e2e26a4302379103dbc47a2 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 205 225 7.3E-43 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_05135 28b74dbd5e2e26a4302379103dbc47a2 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 7.3E-43 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_05135 28b74dbd5e2e26a4302379103dbc47a2 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 151 170 7.3E-43 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_05135 28b74dbd5e2e26a4302379103dbc47a2 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 172 189 7.3E-43 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_15455 8e5e83e06d7f475b13c517f4c049e5d0 178 SUPERFAMILY SSF53271 3 174 4.06E-56 T 15-10-2018 IPR029057 Phosphoribosyltransferase-like AM378_15455 8e5e83e06d7f475b13c517f4c049e5d0 178 Gene3D G3DSA:3.40.50.2020 1 176 5.6E-67 T 15-10-2018 AM378_15455 8e5e83e06d7f475b13c517f4c049e5d0 178 TIGRFAM TIGR01203 HGPRTase: hypoxanthine phosphoribosyltransferase 7 173 5.2E-74 T 15-10-2018 IPR005904 Hypoxanthine phosphoribosyl transferase GO:0004422|GO:0005737|GO:0006166 KEGG: 00230+2.4.2.8|KEGG: 00983+2.4.2.8|MetaCyc: PWY-6599|MetaCyc: PWY-6609|MetaCyc: PWY-6610|MetaCyc: PWY-6620 AM378_15455 8e5e83e06d7f475b13c517f4c049e5d0 178 Pfam PF00156 Phosphoribosyl transferase domain 12 160 3.0E-26 T 15-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 AM378_18985 ead64d124190a4478c28cff3363a736c 152 SUPERFAMILY SSF51283 1 151 2.49E-56 T 15-10-2018 IPR036157 dUTPase-like superfamily AM378_18985 ead64d124190a4478c28cff3363a736c 152 Pfam PF00692 dUTPase 18 150 5.6E-44 T 15-10-2018 IPR029054 dUTPase-like AM378_18985 ead64d124190a4478c28cff3363a736c 152 TIGRFAM TIGR00576 dut: dUTP diphosphatase 11 151 1.4E-49 T 15-10-2018 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|KEGG: 00983+3.6.1.23 AM378_18985 ead64d124190a4478c28cff3363a736c 152 Gene3D G3DSA:2.70.40.10 1 151 7.5E-54 T 15-10-2018 IPR036157 dUTPase-like superfamily AM378_18985 ead64d124190a4478c28cff3363a736c 152 Hamap MF_00116 Deoxyuridine 5'-triphosphate nucleotidohydrolase [dut]. 7 151 34.493 T 15-10-2018 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|KEGG: 00983+3.6.1.23 AM378_15100 568e7245287556ca184bfbc2a3e5c444 360 Pfam PF02653 Branched-chain amino acid transport system / permease component 60 323 1.1E-29 T 15-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 AM378_07345 debecd0f374401ff0da0a25afaf852f5 275 SMART SM00342 187 269 1.2E-23 T 15-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM378_07345 debecd0f374401ff0da0a25afaf852f5 275 SUPERFAMILY SSF46689 171 220 1.43E-8 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AM378_07345 debecd0f374401ff0da0a25afaf852f5 275 Pfam PF12833 Helix-turn-helix domain 193 270 3.0E-18 T 15-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM378_07345 debecd0f374401ff0da0a25afaf852f5 275 Pfam PF02311 AraC-like ligand binding domain 24 151 1.5E-25 T 15-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 AM378_07345 debecd0f374401ff0da0a25afaf852f5 275 Gene3D G3DSA:1.10.10.60 168 273 8.9E-26 T 15-10-2018 AM378_07345 debecd0f374401ff0da0a25afaf852f5 275 SUPERFAMILY SSF46689 223 272 2.94E-8 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AM378_07345 debecd0f374401ff0da0a25afaf852f5 275 SUPERFAMILY SSF51215 32 150 2.48E-19 T 15-10-2018 IPR037923 Transcription regulator HTH-like AM378_23995 7d53f64332964e80e60fae9eea24194c 453 Pfam PF13449 Esterase-like activity of phytase 53 391 1.2E-51 T 15-10-2018 IPR027372 Phytase-like domain AM378_05525 032046f82ed15a94140c9fbbde56d4dd 327 SUPERFAMILY SSF55681 92 327 9.59E-82 T 15-10-2018 AM378_05525 032046f82ed15a94140c9fbbde56d4dd 327 Gene3D G3DSA:3.30.930.10 8 327 8.7E-124 T 15-10-2018 AM378_05525 032046f82ed15a94140c9fbbde56d4dd 327 Hamap MF_00281 Phenylalanine--tRNA ligase alpha subunit [pheS]. 8 326 49.515 T 15-10-2018 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial GO:0004826 KEGG: 00970+6.1.1.20 AM378_05525 032046f82ed15a94140c9fbbde56d4dd 327 SUPERFAMILY SSF46589 14 99 7.85E-21 T 15-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 AM378_05525 032046f82ed15a94140c9fbbde56d4dd 327 Pfam PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain 20 87 2.0E-25 T 15-10-2018 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 AM378_05525 032046f82ed15a94140c9fbbde56d4dd 327 TIGRFAM TIGR00468 pheS: phenylalanine--tRNA ligase, alpha subunit 39 327 5.2E-118 T 15-10-2018 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 AM378_05525 032046f82ed15a94140c9fbbde56d4dd 327 Pfam PF01409 tRNA synthetases class II core domain (F) 92 326 3.9E-107 T 15-10-2018 IPR002319 Phenylalanyl-tRNA synthetase GO:0000049|GO:0004812|GO:0005524|GO:0005737|GO:0043039 KEGG: 00970+6.1.1.20 AM378_00175 55bd9a25510dab6b93316784ae5fd286 67 SUPERFAMILY SSF68989 1 67 6.28E-32 T 15-10-2018 IPR036666 HHA superfamily AM378_00175 55bd9a25510dab6b93316784ae5fd286 67 Pfam PF05321 Haemolysin expression modulating protein 8 64 3.4E-33 T 15-10-2018 IPR007985 Haemolysin expression modulating, HHA AM378_00175 55bd9a25510dab6b93316784ae5fd286 67 Gene3D G3DSA:1.20.1280.40 1 67 1.8E-37 T 15-10-2018 IPR036666 HHA superfamily AM378_22225 2a9e744f78237c0aaedc1973dae75e40 303 SUPERFAMILY SSF46785 5 89 1.85E-20 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM378_22225 2a9e744f78237c0aaedc1973dae75e40 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 64 3.1E-16 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_22225 2a9e744f78237c0aaedc1973dae75e40 303 Gene3D G3DSA:3.40.190.10 165 265 1.7E-64 T 15-10-2018 AM378_22225 2a9e744f78237c0aaedc1973dae75e40 303 SUPERFAMILY SSF53850 91 296 5.25E-45 T 15-10-2018 AM378_22225 2a9e744f78237c0aaedc1973dae75e40 303 Pfam PF03466 LysR substrate binding domain 90 294 1.3E-42 T 15-10-2018 IPR005119 LysR, substrate-binding AM378_22225 2a9e744f78237c0aaedc1973dae75e40 303 Gene3D G3DSA:1.10.10.10 4 88 9.1E-24 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_22225 2a9e744f78237c0aaedc1973dae75e40 303 Gene3D G3DSA:3.40.190.10 93 289 1.7E-64 T 15-10-2018 AM378_05130 8ac71fb22b077121b58169e73060d117 142 PIRSF PIRSF006276 1 141 7.7E-40 T 15-10-2018 IPR006015 Universal stress protein A AM378_05130 8ac71fb22b077121b58169e73060d117 142 Pfam PF00582 Universal stress protein family 3 138 2.7E-14 T 15-10-2018 IPR006016 UspA AM378_05130 8ac71fb22b077121b58169e73060d117 142 SUPERFAMILY SSF52402 3 139 1.26E-22 T 15-10-2018 AM378_05130 8ac71fb22b077121b58169e73060d117 142 Gene3D G3DSA:3.40.50.620 2 141 1.3E-32 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM378_06935 104a3a805b988045ab7c6cb6f61cd36b 511 SMART SM00155 165 192 1.7E-5 T 15-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 AM378_06935 104a3a805b988045ab7c6cb6f61cd36b 511 SMART SM00155 401 428 5.6E-7 T 15-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 AM378_06935 104a3a805b988045ab7c6cb6f61cd36b 511 SUPERFAMILY SSF56024 29 228 4.49E-42 T 15-10-2018 AM378_06935 104a3a805b988045ab7c6cb6f61cd36b 511 Gene3D G3DSA:3.30.870.10 56 236 1.4E-38 T 15-10-2018 AM378_06935 104a3a805b988045ab7c6cb6f61cd36b 511 SUPERFAMILY SSF56024 304 489 2.69E-28 T 15-10-2018 AM378_06935 104a3a805b988045ab7c6cb6f61cd36b 511 Pfam PF13091 PLD-like domain 316 453 1.6E-19 T 15-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 AM378_06935 104a3a805b988045ab7c6cb6f61cd36b 511 Pfam PF13091 PLD-like domain 80 224 4.1E-18 T 15-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 AM378_06935 104a3a805b988045ab7c6cb6f61cd36b 511 Gene3D G3DSA:3.30.870.10 269 468 1.8E-34 T 15-10-2018 AM378_22935 ef6934bf32c12ffb1b37c3b3a70e97d9 198 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 26 167 4.2E-29 T 15-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 AM378_22935 ef6934bf32c12ffb1b37c3b3a70e97d9 198 SMART SM00644 16 166 1.1E-61 T 15-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 AM378_22935 ef6934bf32c12ffb1b37c3b3a70e97d9 198 SUPERFAMILY SSF55846 2 179 1.15E-69 T 15-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 AM378_22935 ef6934bf32c12ffb1b37c3b3a70e97d9 198 Gene3D G3DSA:3.40.80.10 2 183 1.5E-60 T 15-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 AM378_14100 5e166a90abb0c77ea281a6184ad674e9 436 Gene3D G3DSA:1.20.1250.20 24 436 3.1E-68 T 15-10-2018 AM378_14100 5e166a90abb0c77ea281a6184ad674e9 436 Pfam PF00083 Sugar (and other) transporter 229 422 1.6E-12 T 15-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 AM378_14100 5e166a90abb0c77ea281a6184ad674e9 436 Pfam PF00083 Sugar (and other) transporter 29 225 6.7E-27 T 15-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 AM378_14100 5e166a90abb0c77ea281a6184ad674e9 436 ProSitePatterns PS00217 Sugar transport proteins signature 2. 137 162 - T 15-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AM378_14100 5e166a90abb0c77ea281a6184ad674e9 436 ProSitePatterns PS00216 Sugar transport proteins signature 1. 303 320 - T 15-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AM378_14100 5e166a90abb0c77ea281a6184ad674e9 436 TIGRFAM TIGR00883 2A0106: MFS transporter, metabolite:H+ symporter (MHS) family protein 34 420 1.9E-138 T 15-10-2018 IPR004736 MFS transporter, metabolite:H symporter GO:0016021|GO:0022857|GO:0055085 AM378_14100 5e166a90abb0c77ea281a6184ad674e9 436 SUPERFAMILY SSF103473 21 433 4.32E-67 T 15-10-2018 IPR036259 MFS transporter superfamily AM378_21705 1b7538d5f00df3b81a668bed80cb0e82 509 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 5 249 2.3E-63 T 15-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 AM378_21705 1b7538d5f00df3b81a668bed80cb0e82 509 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 261 441 1.6E-26 T 15-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 AM378_21705 1b7538d5f00df3b81a668bed80cb0e82 509 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 354 374 - T 15-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 AM378_21705 1b7538d5f00df3b81a668bed80cb0e82 509 SUPERFAMILY SSF53067 251 490 1.3E-48 T 15-10-2018 AM378_21705 1b7538d5f00df3b81a668bed80cb0e82 509 PIRSF PIRSF000538 2 495 2.6E-127 T 15-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 AM378_21705 1b7538d5f00df3b81a668bed80cb0e82 509 Gene3D G3DSA:3.30.420.40 253 500 5.0E-65 T 15-10-2018 AM378_21705 1b7538d5f00df3b81a668bed80cb0e82 509 Gene3D G3DSA:3.30.420.40 1 241 3.4E-81 T 15-10-2018 AM378_21705 1b7538d5f00df3b81a668bed80cb0e82 509 SUPERFAMILY SSF53067 5 252 8.03E-72 T 15-10-2018 AM378_04895 e3119b089f4b745d37e92573ee4a8b38 278 Pfam PF02146 Sir2 family 46 219 1.3E-50 T 15-10-2018 IPR003000 Sirtuin family GO:0070403 AM378_04895 e3119b089f4b745d37e92573ee4a8b38 278 Hamap MF_01121 NAD-dependent protein deacylase [cobB]. 39 269 59.457 T 15-10-2018 IPR027546 Sirtuin, class III GO:0036054|GO:0036055|GO:0070403 Reactome: R-HSA-2151201 AM378_04895 e3119b089f4b745d37e92573ee4a8b38 278 Gene3D G3DSA:3.40.50.1220 41 261 3.2E-81 T 15-10-2018 AM378_04895 e3119b089f4b745d37e92573ee4a8b38 278 SUPERFAMILY SSF52467 41 267 1.86E-73 T 15-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily AM378_04895 e3119b089f4b745d37e92573ee4a8b38 278 Gene3D G3DSA:3.30.1600.10 55 191 3.2E-81 T 15-10-2018 IPR026591 Sirtuin, catalytic core small domain superfamily AM378_04205 d3e12caef1d0e3075c956e7d7283d146 132 Gene3D G3DSA:3.10.180.10 1 130 2.6E-48 T 15-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AM378_04205 d3e12caef1d0e3075c956e7d7283d146 132 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 10 123 3.2E-7 T 15-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AM378_04205 d3e12caef1d0e3075c956e7d7283d146 132 SUPERFAMILY SSF54593 9 126 1.3E-19 T 15-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AM378_09915 7ea70c9666f6429b0dee627388e29e55 400 Gene3D G3DSA:1.25.40.590 4 162 1.6E-57 T 15-10-2018 IPR038522 Type IV / VI secretion system, DotU superfamily AM378_09915 7ea70c9666f6429b0dee627388e29e55 400 Pfam PF00691 OmpA family 276 374 2.0E-18 T 15-10-2018 IPR006665 OmpA-like domain AM378_09915 7ea70c9666f6429b0dee627388e29e55 400 Pfam PF09850 Type VI secretion system protein DotU 7 209 9.4E-71 T 15-10-2018 IPR017732 Type IV / VI secretion system, DotU AM378_09915 7ea70c9666f6429b0dee627388e29e55 400 TIGRFAM TIGR03349 IV_VI_DotU: type IV/VI secretion system protein, DotU family 6 214 1.2E-69 T 15-10-2018 IPR017732 Type IV / VI secretion system, DotU AM378_09915 7ea70c9666f6429b0dee627388e29e55 400 TIGRFAM TIGR03350 type_VI_ompA: type VI secretion system peptidoglycan-associated domain 245 379 9.9E-48 T 15-10-2018 IPR017733 Type VI secretion system peptidoglycan-associated domain AM378_09915 7ea70c9666f6429b0dee627388e29e55 400 Gene3D G3DSA:3.30.1330.60 237 384 1.1E-42 T 15-10-2018 IPR036737 OmpA-like domain superfamily AM378_09915 7ea70c9666f6429b0dee627388e29e55 400 SUPERFAMILY SSF103088 251 380 2.35E-28 T 15-10-2018 IPR036737 OmpA-like domain superfamily AM378_01240 c9b699a548a288c1cf6c512c2aabcf4e 720 Gene3D G3DSA:2.170.130.10 57 181 1.8E-22 T 15-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily AM378_01240 c9b699a548a288c1cf6c512c2aabcf4e 720 Pfam PF00593 TonB dependent receptor 263 712 1.8E-44 T 15-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel AM378_01240 c9b699a548a288c1cf6c512c2aabcf4e 720 Gene3D G3DSA:2.40.170.20 188 720 6.0E-90 T 15-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AM378_01240 c9b699a548a288c1cf6c512c2aabcf4e 720 SUPERFAMILY SSF56935 54 720 2.41E-107 T 15-10-2018 AM378_01240 c9b699a548a288c1cf6c512c2aabcf4e 720 Pfam PF07715 TonB-dependent Receptor Plug Domain 77 173 7.8E-14 T 15-10-2018 IPR012910 TonB-dependent receptor, plug domain AM378_13895 5ab5ce97b452ec6fac5ceb8b06ab59c6 190 Pfam PF01713 Smr domain 92 172 1.9E-18 T 15-10-2018 IPR002625 Smr domain AM378_13895 5ab5ce97b452ec6fac5ceb8b06ab59c6 190 SMART SM00463 88 172 4.9E-13 T 15-10-2018 IPR002625 Smr domain AM378_13895 5ab5ce97b452ec6fac5ceb8b06ab59c6 190 Gene3D G3DSA:3.30.1370.110 42 178 3.5E-45 T 15-10-2018 AM378_13895 5ab5ce97b452ec6fac5ceb8b06ab59c6 190 SUPERFAMILY SSF160443 89 172 1.01E-10 T 15-10-2018 IPR036063 Smr domain superfamily AM378_19195 9856b899f742a2fe7a2b77fbc3f9af3d 471 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 17 432 3.5E-77 T 15-10-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0016021|GO:0022857|GO:0055085 AM378_19195 9856b899f742a2fe7a2b77fbc3f9af3d 471 Gene3D G3DSA:1.20.1250.20 256 456 1.3E-11 T 15-10-2018 AM378_19195 9856b899f742a2fe7a2b77fbc3f9af3d 471 PRINTS PR01036 Tetracycline resistance protein TetB signature 396 415 6.0E-6 T 15-10-2018 AM378_19195 9856b899f742a2fe7a2b77fbc3f9af3d 471 PRINTS PR01036 Tetracycline resistance protein TetB signature 14 38 6.0E-6 T 15-10-2018 AM378_19195 9856b899f742a2fe7a2b77fbc3f9af3d 471 PRINTS PR01036 Tetracycline resistance protein TetB signature 135 159 6.0E-6 T 15-10-2018 AM378_19195 9856b899f742a2fe7a2b77fbc3f9af3d 471 PRINTS PR01036 Tetracycline resistance protein TetB signature 105 125 6.0E-6 T 15-10-2018 AM378_19195 9856b899f742a2fe7a2b77fbc3f9af3d 471 Gene3D G3DSA:1.20.1720.10 13 255 6.0E-48 T 15-10-2018 AM378_19195 9856b899f742a2fe7a2b77fbc3f9af3d 471 Pfam PF07690 Major Facilitator Superfamily 16 405 3.7E-42 T 15-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM378_19195 9856b899f742a2fe7a2b77fbc3f9af3d 471 SUPERFAMILY SSF103473 13 452 6.41E-59 T 15-10-2018 IPR036259 MFS transporter superfamily AM378_08705 6d6ee9609b80468d9d30a755226714c3 63 SMART SM00834 1 42 1.1E-20 T 15-10-2018 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain AM378_08705 6d6ee9609b80468d9d30a755226714c3 63 Pfam PF09723 Zinc ribbon domain 1 41 1.4E-17 T 15-10-2018 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain AM378_08705 6d6ee9609b80468d9d30a755226714c3 63 TIGRFAM TIGR02605 CxxC_CxxC_SSSS: putative regulatory protein, FmdB family 1 52 2.7E-23 T 15-10-2018 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain AM378_22840 e5a9a983e559fef620f59b9496490d80 354 Gene3D G3DSA:3.40.50.2000 162 319 3.9E-125 T 15-10-2018 AM378_22840 e5a9a983e559fef620f59b9496490d80 354 Gene3D G3DSA:3.40.50.2000 9 161 3.9E-125 T 15-10-2018 AM378_22840 e5a9a983e559fef620f59b9496490d80 354 TIGRFAM TIGR01133 murG: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase 1 348 7.6E-115 T 15-10-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0050511 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AM378_22840 e5a9a983e559fef620f59b9496490d80 354 SUPERFAMILY SSF53756 6 353 1.33E-130 T 15-10-2018 AM378_22840 e5a9a983e559fef620f59b9496490d80 354 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 185 344 5.1E-37 T 15-10-2018 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-5633231 AM378_22840 e5a9a983e559fef620f59b9496490d80 354 Hamap MF_00033 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [murG]. 8 353 35.371 T 15-10-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0050511 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AM378_22840 e5a9a983e559fef620f59b9496490d80 354 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 9 145 9.1E-49 T 15-10-2018 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AM378_03470 8a8474e85122e816dc87217f44fecd45 361 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 188 207 - T 15-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site AM378_03470 8a8474e85122e816dc87217f44fecd45 361 Hamap MF_00160 Phosphoserine aminotransferase [serC]. 2 360 51.373 T 15-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 AM378_03470 8a8474e85122e816dc87217f44fecd45 361 SUPERFAMILY SSF53383 3 361 1.03E-116 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM378_03470 8a8474e85122e816dc87217f44fecd45 361 TIGRFAM TIGR01364 serC_1: phosphoserine transaminase 4 360 1.7E-155 T 15-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 AM378_03470 8a8474e85122e816dc87217f44fecd45 361 PIRSF PIRSF000525 1 361 2.5E-149 T 15-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 AM378_03470 8a8474e85122e816dc87217f44fecd45 361 Pfam PF00266 Aminotransferase class-V 4 349 1.9E-65 T 15-10-2018 IPR000192 Aminotransferase class V domain AM378_03470 8a8474e85122e816dc87217f44fecd45 361 Gene3D G3DSA:3.40.640.10 17 257 5.4E-91 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AM378_03470 8a8474e85122e816dc87217f44fecd45 361 Gene3D G3DSA:3.90.1150.10 258 361 1.8E-40 T 15-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AM378_22745 c08c4b5529a2d41b582f654a2d36cf85 466 TIGRFAM TIGR00170 leuC: 3-isopropylmalate dehydratase, large subunit 1 465 9.5E-270 T 15-10-2018 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 AM378_22745 c08c4b5529a2d41b582f654a2d36cf85 466 PRINTS PR00415 Aconitase family signature 195 208 3.3E-50 T 15-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AM378_22745 c08c4b5529a2d41b582f654a2d36cf85 466 PRINTS PR00415 Aconitase family signature 286 300 3.3E-50 T 15-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AM378_22745 c08c4b5529a2d41b582f654a2d36cf85 466 PRINTS PR00415 Aconitase family signature 133 148 3.3E-50 T 15-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AM378_22745 c08c4b5529a2d41b582f654a2d36cf85 466 PRINTS PR00415 Aconitase family signature 119 132 3.3E-50 T 15-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AM378_22745 c08c4b5529a2d41b582f654a2d36cf85 466 PRINTS PR00415 Aconitase family signature 82 95 3.3E-50 T 15-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AM378_22745 c08c4b5529a2d41b582f654a2d36cf85 466 PRINTS PR00415 Aconitase family signature 209 222 3.3E-50 T 15-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AM378_22745 c08c4b5529a2d41b582f654a2d36cf85 466 PRINTS PR00415 Aconitase family signature 108 116 3.3E-50 T 15-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AM378_22745 c08c4b5529a2d41b582f654a2d36cf85 466 PRINTS PR00415 Aconitase family signature 343 354 3.3E-50 T 15-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AM378_22745 c08c4b5529a2d41b582f654a2d36cf85 466 PRINTS PR00415 Aconitase family signature 399 412 3.3E-50 T 15-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AM378_22745 c08c4b5529a2d41b582f654a2d36cf85 466 Hamap MF_01026 3-isopropylmalate dehydratase large subunit [leuC]. 1 466 62.09 T 15-10-2018 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 AM378_22745 c08c4b5529a2d41b582f654a2d36cf85 466 Gene3D G3DSA:3.30.499.20 4 286 1.5E-100 T 15-10-2018 AM378_22745 c08c4b5529a2d41b582f654a2d36cf85 466 ProSitePatterns PS00450 Aconitase family signature 1. 339 355 - T 15-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 AM378_22745 c08c4b5529a2d41b582f654a2d36cf85 466 Gene3D G3DSA:3.30.499.10 324 466 3.0E-51 T 15-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 AM378_22745 c08c4b5529a2d41b582f654a2d36cf85 466 ProSitePatterns PS01244 Aconitase family signature 2. 399 412 - T 15-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 AM378_22745 c08c4b5529a2d41b582f654a2d36cf85 466 SUPERFAMILY SSF53732 2 465 6.54E-169 T 15-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 AM378_22745 c08c4b5529a2d41b582f654a2d36cf85 466 Pfam PF00330 Aconitase family (aconitate hydratase) 8 457 1.8E-163 T 15-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AM378_08410 3d62ed9583a6b9ef3e1d8d3b8f8b6c59 338 PRINTS PR00139 Asparaginase/glutaminase family signature 6 17 4.5E-17 T 15-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 AM378_08410 3d62ed9583a6b9ef3e1d8d3b8f8b6c59 338 PRINTS PR00139 Asparaginase/glutaminase family signature 83 101 4.5E-17 T 15-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 AM378_08410 3d62ed9583a6b9ef3e1d8d3b8f8b6c59 338 PRINTS PR00139 Asparaginase/glutaminase family signature 260 278 4.5E-17 T 15-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 AM378_08410 3d62ed9583a6b9ef3e1d8d3b8f8b6c59 338 ProSitePatterns PS00917 Asparaginase / glutaminase active site signature 2. 84 94 - T 15-10-2018 IPR027475 Asparaginase/glutaminase, active site 2 Reactome: R-HSA-70614 AM378_08410 3d62ed9583a6b9ef3e1d8d3b8f8b6c59 338 PIRSF PIRSF500176 2 332 4.6E-112 T 15-10-2018 AM378_08410 3d62ed9583a6b9ef3e1d8d3b8f8b6c59 338 SMART SM00870 5 323 1.0E-138 T 15-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 AM378_08410 3d62ed9583a6b9ef3e1d8d3b8f8b6c59 338 Pfam PF00710 Asparaginase, N-terminal 6 188 1.1E-63 T 15-10-2018 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 AM378_08410 3d62ed9583a6b9ef3e1d8d3b8f8b6c59 338 ProSitePatterns PS00144 Asparaginase / glutaminase active site signature 1. 8 16 - T 15-10-2018 IPR020827 Asparaginase/glutaminase, active site 1 GO:0006520 AM378_08410 3d62ed9583a6b9ef3e1d8d3b8f8b6c59 338 PIRSF PIRSF001220 1 334 1.0E-96 T 15-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 AM378_08410 3d62ed9583a6b9ef3e1d8d3b8f8b6c59 338 Gene3D G3DSA:3.40.50.40 209 337 5.0E-47 T 15-10-2018 IPR027473 L-asparaginase, C-terminal Reactome: R-HSA-70614 AM378_08410 3d62ed9583a6b9ef3e1d8d3b8f8b6c59 338 SUPERFAMILY SSF53774 3 335 9.94E-110 T 15-10-2018 IPR036152 Asparaginase/glutaminase-like superfamily Reactome: R-HSA-70614 AM378_08410 3d62ed9583a6b9ef3e1d8d3b8f8b6c59 338 Gene3D G3DSA:3.40.50.1170 1 208 4.6E-90 T 15-10-2018 IPR037152 L-asparaginase, N-terminal domain superfamily Reactome: R-HSA-70614 AM378_08410 3d62ed9583a6b9ef3e1d8d3b8f8b6c59 338 TIGRFAM TIGR00519 asnASE_I: L-asparaginase, type I 3 335 2.2E-127 T 15-10-2018 IPR006033 L-asparaginase, type I GO:0004067|GO:0006520 Reactome: R-HSA-70614 AM378_22060 c9de74886a0d1acf0d17a6283f6cd0c3 370 Pfam PF00850 Histone deacetylase domain 41 328 2.1E-76 T 15-10-2018 IPR023801 Histone deacetylase domain Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 AM378_22060 c9de74886a0d1acf0d17a6283f6cd0c3 370 Gene3D G3DSA:3.40.800.20 2 370 1.5E-141 T 15-10-2018 IPR037138 Histone deacetylase domain superfamily Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 AM378_22060 c9de74886a0d1acf0d17a6283f6cd0c3 370 PRINTS PR01270 Histone deacetylase superfamily signature 174 189 1.1E-14 T 15-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 AM378_22060 c9de74886a0d1acf0d17a6283f6cd0c3 370 PRINTS PR01270 Histone deacetylase superfamily signature 259 269 1.1E-14 T 15-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 AM378_22060 c9de74886a0d1acf0d17a6283f6cd0c3 370 PRINTS PR01270 Histone deacetylase superfamily signature 140 163 1.1E-14 T 15-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 AM378_22060 c9de74886a0d1acf0d17a6283f6cd0c3 370 SUPERFAMILY SSF52768 2 347 9.59E-102 T 15-10-2018 IPR023696 Ureohydrolase domain superfamily AM378_21665 026f96265511ea2918b8d93cde25f1a3 503 SUPERFAMILY SSF52949 1 184 3.77E-51 T 15-10-2018 AM378_21665 026f96265511ea2918b8d93cde25f1a3 503 Gene3D G3DSA:3.40.630.10 181 498 1.2E-141 T 15-10-2018 AM378_21665 026f96265511ea2918b8d93cde25f1a3 503 Pfam PF02789 Cytosol aminopeptidase family, N-terminal domain 19 147 2.0E-33 T 15-10-2018 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 AM378_21665 026f96265511ea2918b8d93cde25f1a3 503 Gene3D G3DSA:3.40.220.10 1 159 7.9E-59 T 15-10-2018 AM378_21665 026f96265511ea2918b8d93cde25f1a3 503 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 186 489 8.6E-123 T 15-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 AM378_21665 026f96265511ea2918b8d93cde25f1a3 503 Hamap MF_00181 Probable cytosol aminopeptidase [pepA]. 3 498 41.039 T 15-10-2018 IPR023042 Peptidase M17, leucine aminopeptidase KEGG: 00480+3.4.11.1 AM378_21665 026f96265511ea2918b8d93cde25f1a3 503 PRINTS PR00481 Cytosol aminopeptidase signature 374 389 1.1E-53 T 15-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AM378_21665 026f96265511ea2918b8d93cde25f1a3 503 PRINTS PR00481 Cytosol aminopeptidase signature 346 366 1.1E-53 T 15-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AM378_21665 026f96265511ea2918b8d93cde25f1a3 503 PRINTS PR00481 Cytosol aminopeptidase signature 287 308 1.1E-53 T 15-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AM378_21665 026f96265511ea2918b8d93cde25f1a3 503 PRINTS PR00481 Cytosol aminopeptidase signature 324 345 1.1E-53 T 15-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AM378_21665 026f96265511ea2918b8d93cde25f1a3 503 PRINTS PR00481 Cytosol aminopeptidase signature 265 282 1.1E-53 T 15-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AM378_21665 026f96265511ea2918b8d93cde25f1a3 503 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 350 357 - T 15-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 AM378_21665 026f96265511ea2918b8d93cde25f1a3 503 SUPERFAMILY SSF53187 180 496 2.45E-125 T 15-10-2018 AM378_14425 a65d4400057883ad5a1eb41acfaed81c 268 Gene3D G3DSA:3.40.50.720 1 268 3.1E-112 T 15-10-2018 AM378_14425 a65d4400057883ad5a1eb41acfaed81c 268 SUPERFAMILY SSF69572 6 259 3.92E-64 T 15-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 AM378_14425 a65d4400057883ad5a1eb41acfaed81c 268 Pfam PF00899 ThiF family 23 262 3.8E-37 T 15-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 AM378_00045 b941e15f6fbe1f4fbb67222405d3cd23 591 SUPERFAMILY SSF90123 9 325 1.7E-72 T 15-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 AM378_00045 b941e15f6fbe1f4fbb67222405d3cd23 591 Pfam PF00005 ABC transporter 352 500 5.9E-31 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM378_00045 b941e15f6fbe1f4fbb67222405d3cd23 591 SMART SM00382 361 547 2.7E-13 T 15-10-2018 IPR003593 AAA+ ATPase domain AM378_00045 b941e15f6fbe1f4fbb67222405d3cd23 591 Gene3D G3DSA:1.20.1560.10 5 318 2.8E-76 T 15-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 AM378_00045 b941e15f6fbe1f4fbb67222405d3cd23 591 Pfam PF00664 ABC transporter transmembrane region 21 291 1.6E-38 T 15-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 AM378_00045 b941e15f6fbe1f4fbb67222405d3cd23 591 ProSitePatterns PS00211 ABC transporters family signature. 473 487 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM378_00045 b941e15f6fbe1f4fbb67222405d3cd23 591 SUPERFAMILY SSF52540 327 572 3.55E-80 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_00045 b941e15f6fbe1f4fbb67222405d3cd23 591 Gene3D G3DSA:3.40.50.300 330 584 7.3E-79 T 15-10-2018 AM378_07145 26cc93d361efc39a09675a32af5aae26 287 SUPERFAMILY SSF53850 95 284 2.35E-29 T 15-10-2018 AM378_07145 26cc93d361efc39a09675a32af5aae26 287 Gene3D G3DSA:3.40.190.10 164 253 5.8E-36 T 15-10-2018 AM378_07145 26cc93d361efc39a09675a32af5aae26 287 Gene3D G3DSA:3.40.190.10 98 279 5.8E-36 T 15-10-2018 AM378_07145 26cc93d361efc39a09675a32af5aae26 287 SUPERFAMILY SSF46785 7 114 2.95E-23 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM378_07145 26cc93d361efc39a09675a32af5aae26 287 Pfam PF03466 LysR substrate binding domain 96 283 9.4E-26 T 15-10-2018 IPR005119 LysR, substrate-binding AM378_07145 26cc93d361efc39a09675a32af5aae26 287 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 4.6E-8 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_07145 26cc93d361efc39a09675a32af5aae26 287 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 4.6E-8 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_07145 26cc93d361efc39a09675a32af5aae26 287 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 4.6E-8 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_07145 26cc93d361efc39a09675a32af5aae26 287 Gene3D G3DSA:1.10.10.10 7 95 1.0E-23 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_07145 26cc93d361efc39a09675a32af5aae26 287 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 66 9.8E-21 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_05975 ba6a51111c10ff540e02d08ce13e7aef 395 TIGRFAM TIGR00843 benE: benzoate transporter 5 386 8.5E-148 T 15-10-2018 IPR004711 Benzoate transporter GO:0016021|GO:0042919|GO:0042925 AM378_05975 ba6a51111c10ff540e02d08ce13e7aef 395 Pfam PF03594 Benzoate membrane transport protein 11 384 1.2E-142 T 15-10-2018 IPR004711 Benzoate transporter GO:0016021|GO:0042919|GO:0042925 AM378_08860 7eba1b51fca055278ccfdaa0969dfde2 454 SUPERFAMILY SSF143548 16 157 3.66E-46 T 15-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 AM378_08860 7eba1b51fca055278ccfdaa0969dfde2 454 Pfam PF03313 Serine dehydratase alpha chain 184 448 1.3E-95 T 15-10-2018 IPR005130 Serine dehydratase-like, alpha subunit AM378_08860 7eba1b51fca055278ccfdaa0969dfde2 454 TIGRFAM TIGR00720 sda_mono: L-serine ammonia-lyase 2 451 4.5E-228 T 15-10-2018 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 AM378_08860 7eba1b51fca055278ccfdaa0969dfde2 454 Gene3D G3DSA:3.30.1330.90 10 159 1.7E-52 T 15-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 AM378_08860 7eba1b51fca055278ccfdaa0969dfde2 454 Pfam PF03315 Serine dehydratase beta chain 3 155 1.5E-56 T 15-10-2018 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 AM378_15885 975505d108f4656fe487ffc8e92e2da6 465 Gene3D G3DSA:1.10.4160.10 7 450 1.5E-29 T 15-10-2018 IPR038271 Purine-cytosine permease superfamily AM378_15885 975505d108f4656fe487ffc8e92e2da6 465 PIRSF PIRSF002744 2 465 4.7E-94 T 15-10-2018 IPR026030 Purine-cytosine permease Fcy2/21/22 GO:0005215|GO:0016021|GO:0055085 AM378_15885 975505d108f4656fe487ffc8e92e2da6 465 Pfam PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin 20 421 6.4E-41 T 15-10-2018 IPR001248 Purine-cytosine permease GO:0016020|GO:0022857|GO:0055085 AM378_03510 c6260b4f0241126cbbc706af0013a2a1 468 SMART SM01150 13 414 3.1E-232 T 15-10-2018 IPR009770 Domain of unknown function DUF1338 AM378_03510 c6260b4f0241126cbbc706af0013a2a1 468 Gene3D G3DSA:3.10.180.80 3 451 3.0E-193 T 15-10-2018 AM378_03510 c6260b4f0241126cbbc706af0013a2a1 468 Pfam PF07063 Domain of unknown function (DUF1338) 11 414 1.2E-118 T 15-10-2018 IPR009770 Domain of unknown function DUF1338 AM378_23340 e6c934258abdd23e9cb57aa38077e02e 73 Pfam PF16080 Bacteriophage holin family HP1 2 53 2.1E-13 T 15-10-2018 IPR032118 Bacteriophage holin HP1 family AM378_05030 12bdc2398ff2d9126a1e0057b27b1ae2 208 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 66 80 - T 15-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 AM378_05030 12bdc2398ff2d9126a1e0057b27b1ae2 208 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 35 206 1.8E-57 T 15-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 AM378_05030 12bdc2398ff2d9126a1e0057b27b1ae2 208 Gene3D G3DSA:3.30.70.580 19 94 1.1E-26 T 15-10-2018 AM378_05030 12bdc2398ff2d9126a1e0057b27b1ae2 208 Pfam PF00849 RNA pseudouridylate synthase 61 176 1.6E-11 T 15-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM378_05030 12bdc2398ff2d9126a1e0057b27b1ae2 208 Gene3D G3DSA:3.30.70.1560 95 195 5.1E-42 T 15-10-2018 AM378_05030 12bdc2398ff2d9126a1e0057b27b1ae2 208 SUPERFAMILY SSF55120 30 205 1.26E-40 T 15-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM378_18520 f789807c8a6624a1a42e88d016fc5b8a 616 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 509 520 - T 15-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 AM378_18520 f789807c8a6624a1a42e88d016fc5b8a 616 SUPERFAMILY SSF143975 3 420 7.85E-134 T 15-10-2018 IPR037237 IlvD/EDD, N-terminal domain KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 AM378_18520 f789807c8a6624a1a42e88d016fc5b8a 616 SUPERFAMILY SSF52016 421 610 4.71E-60 T 15-10-2018 AM378_18520 f789807c8a6624a1a42e88d016fc5b8a 616 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 122 132 - T 15-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 AM378_18520 f789807c8a6624a1a42e88d016fc5b8a 616 Hamap MF_00012 Dihydroxy-acid dehydratase [ilvD]. 4 610 45.213 T 15-10-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 AM378_18520 f789807c8a6624a1a42e88d016fc5b8a 616 TIGRFAM TIGR00110 ilvD: dihydroxy-acid dehydratase 18 610 8.4E-266 T 15-10-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 AM378_18520 f789807c8a6624a1a42e88d016fc5b8a 616 Gene3D G3DSA:3.50.30.80 421 573 2.9E-55 T 15-10-2018 AM378_18520 f789807c8a6624a1a42e88d016fc5b8a 616 Pfam PF00920 Dehydratase family 34 607 9.5E-219 T 15-10-2018 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 AM378_14800 5c213dce4e46f8426dc9ac13ceceaace 189 Pfam PF03729 Short repeat of unknown function (DUF308) 26 97 1.6E-12 T 15-10-2018 IPR005325 Protein of unknown function DUF308, membrane AM378_14800 5c213dce4e46f8426dc9ac13ceceaace 189 Pfam PF03729 Short repeat of unknown function (DUF308) 84 153 3.6E-9 T 15-10-2018 IPR005325 Protein of unknown function DUF308, membrane AM378_22310 ef3d7246f819df8b550afcea5c556f9f 372 Pfam PF01734 Patatin-like phospholipase 27 195 1.3E-21 T 15-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 AM378_22310 ef3d7246f819df8b550afcea5c556f9f 372 SUPERFAMILY SSF52151 21 279 1.52E-44 T 15-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase AM378_22310 ef3d7246f819df8b550afcea5c556f9f 372 Gene3D G3DSA:3.40.1090.10 7 105 1.7E-12 T 15-10-2018 AM378_22310 ef3d7246f819df8b550afcea5c556f9f 372 Gene3D G3DSA:3.40.1090.10 120 254 2.6E-6 T 15-10-2018 AM378_18215 5eb06be0a6ca442710c5de66839593be 207 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 176 188 2.5E-6 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM378_18215 5eb06be0a6ca442710c5de66839593be 207 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 146 160 2.5E-6 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM378_18215 5eb06be0a6ca442710c5de66839593be 207 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 160 176 2.5E-6 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM378_18215 5eb06be0a6ca442710c5de66839593be 207 SMART SM00421 143 200 3.6E-10 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM378_18215 5eb06be0a6ca442710c5de66839593be 207 SUPERFAMILY SSF46894 136 202 1.33E-13 T 15-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AM378_18215 5eb06be0a6ca442710c5de66839593be 207 ProSitePatterns PS00622 LuxR-type HTH domain signature. 160 187 - T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM378_18215 5eb06be0a6ca442710c5de66839593be 207 Gene3D G3DSA:1.10.10.10 113 204 3.3E-13 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_18215 5eb06be0a6ca442710c5de66839593be 207 Pfam PF00196 Bacterial regulatory proteins, luxR family 145 198 5.8E-12 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM378_04070 b9c3d3ad91055e933f3045909a8b0da8 150 SUPERFAMILY SSF54637 4 140 2.43E-33 T 15-10-2018 IPR029069 HotDog domain superfamily AM378_04070 b9c3d3ad91055e933f3045909a8b0da8 150 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 26 140 9.1E-17 T 15-10-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 AM378_04070 b9c3d3ad91055e933f3045909a8b0da8 150 Gene3D G3DSA:3.10.129.10 6 148 1.5E-33 T 15-10-2018 AM378_04070 b9c3d3ad91055e933f3045909a8b0da8 150 Pfam PF03061 Thioesterase superfamily 56 132 9.3E-10 T 15-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 AM378_19415 7570d081d49d4b8103b05b99b2c0b7e6 119 SUPERFAMILY SSF54211 5 114 1.95E-31 T 15-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AM378_19415 7570d081d49d4b8103b05b99b2c0b7e6 119 Gene3D G3DSA:3.30.230.10 1 119 4.9E-45 T 15-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AM378_19415 7570d081d49d4b8103b05b99b2c0b7e6 119 ProDom PD003629 P RIBONUCLEASE COMPONENT HYDROLASE RNASE C5 RNASEP RNA-BINDING PROCESSING ENDONUCLEASE 17 105 6.0E-44 T 15-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 AM378_19415 7570d081d49d4b8103b05b99b2c0b7e6 119 ProSitePatterns PS00648 Bacterial ribonuclease P protein component signature. 56 70 - T 15-10-2018 IPR020539 Ribonuclease P, conserved site GO:0004526 AM378_19415 7570d081d49d4b8103b05b99b2c0b7e6 119 Pfam PF00825 Ribonuclease P 6 111 1.5E-32 T 15-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 AM378_19415 7570d081d49d4b8103b05b99b2c0b7e6 119 Hamap MF_00227 Ribonuclease P protein component [rnpA]. 6 115 17.66 T 15-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 AM378_19415 7570d081d49d4b8103b05b99b2c0b7e6 119 TIGRFAM TIGR00188 rnpA: ribonuclease P protein component 5 114 7.3E-37 T 15-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 AM378_14940 fb7e8983568989adae49eb7642ef5724 344 Pfam PF02653 Branched-chain amino acid transport system / permease component 44 316 3.8E-28 T 15-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 AM378_01100 d1818c335c09a443c0d6dd774c42ca6f 169 Gene3D G3DSA:3.30.1330.60 40 169 4.1E-47 T 15-10-2018 IPR036737 OmpA-like domain superfamily AM378_01100 d1818c335c09a443c0d6dd774c42ca6f 169 Pfam PF00691 OmpA family 68 163 2.2E-21 T 15-10-2018 IPR006665 OmpA-like domain AM378_01100 d1818c335c09a443c0d6dd774c42ca6f 169 PRINTS PR01021 OMPA domain signature 99 114 1.0E-16 T 15-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AM378_01100 d1818c335c09a443c0d6dd774c42ca6f 169 PRINTS PR01021 OMPA domain signature 114 130 1.0E-16 T 15-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AM378_01100 d1818c335c09a443c0d6dd774c42ca6f 169 PRINTS PR01021 OMPA domain signature 69 91 1.0E-16 T 15-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AM378_01100 d1818c335c09a443c0d6dd774c42ca6f 169 SUPERFAMILY SSF103088 56 168 3.01E-34 T 15-10-2018 IPR036737 OmpA-like domain superfamily AM378_01100 d1818c335c09a443c0d6dd774c42ca6f 169 Hamap MF_02204 Peptidoglycan-associated lipoprotein [pal]. 5 169 31.741 T 15-10-2018 IPR039001 Peptidoglycan-associated lipoprotein GO:0009279|GO:0051301 AM378_01100 d1818c335c09a443c0d6dd774c42ca6f 169 TIGRFAM TIGR02802 Pal_lipo: peptidoglycan-associated lipoprotein 67 169 8.8E-47 T 15-10-2018 IPR014169 Peptidoglycan-associated lipoprotein, C-terminal GO:0009279 AM378_01100 d1818c335c09a443c0d6dd774c42ca6f 169 ProSitePatterns PS01068 OmpA-like domain. 101 145 - T 15-10-2018 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 AM378_22295 985df7aa4d8682679f212190af2eb2ec 204 SMART SM00749 141 204 6.1E-11 T 15-10-2018 IPR014004 Transport-associated and nodulation domain, bacteria AM378_22295 985df7aa4d8682679f212190af2eb2ec 204 SMART SM00749 62 125 1.9E-10 T 15-10-2018 IPR014004 Transport-associated and nodulation domain, bacteria AM378_22295 985df7aa4d8682679f212190af2eb2ec 204 Pfam PF04972 BON domain 137 204 2.5E-19 T 15-10-2018 IPR007055 BON domain AM378_22295 985df7aa4d8682679f212190af2eb2ec 204 Pfam PF04972 BON domain 57 124 8.3E-20 T 15-10-2018 IPR007055 BON domain AM378_13330 552b83bb3aeb5f61386cd730b4ebcc15 373 Gene3D G3DSA:3.30.413.10 262 362 1.0E-22 T 15-10-2018 AM378_13330 552b83bb3aeb5f61386cd730b4ebcc15 373 SUPERFAMILY SSF51604 23 139 1.98E-9 T 15-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily AM378_13330 552b83bb3aeb5f61386cd730b4ebcc15 373 TIGRFAM TIGR00612 ispG_gcpE: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 9 352 9.3E-125 T 15-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 AM378_13330 552b83bb3aeb5f61386cd730b4ebcc15 373 PIRSF PIRSF004640 1 364 1.0E-147 T 15-10-2018 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial GO:0005506|GO:0008299|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 AM378_13330 552b83bb3aeb5f61386cd730b4ebcc15 373 Hamap MF_00159 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin) [ispG]. 7 358 34.749 T 15-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 AM378_13330 552b83bb3aeb5f61386cd730b4ebcc15 373 Gene3D G3DSA:3.20.20.20 1 261 4.9E-105 T 15-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AM378_13330 552b83bb3aeb5f61386cd730b4ebcc15 373 SUPERFAMILY SSF56014 266 354 2.06E-10 T 15-10-2018 AM378_13330 552b83bb3aeb5f61386cd730b4ebcc15 373 Pfam PF04551 GcpE protein 14 354 3.9E-131 T 15-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 AM378_14915 6566e45e9d540c706fd6c75737f4f7cb 1050 Pfam PF13946 Domain of unknown function (DUF4214) 193 241 1.3E-5 T 15-10-2018 IPR025282 Domain of unknown function DUF4214 AM378_18355 7c2dac6992aeac53de348bb1a3de8508 317 Pfam PF02653 Branched-chain amino acid transport system / permease component 42 309 1.9E-36 T 15-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 AM378_24350 c529c2f521f51b03a2a8df2fb4472e43 104 Pfam PF01722 BolA-like protein 10 83 9.2E-28 T 15-10-2018 IPR002634 BolA protein AM378_24350 c529c2f521f51b03a2a8df2fb4472e43 104 PIRSF PIRSF003113 1 99 1.5E-30 T 15-10-2018 IPR002634 BolA protein AM378_24350 c529c2f521f51b03a2a8df2fb4472e43 104 SUPERFAMILY SSF82657 1 88 5.23E-29 T 15-10-2018 IPR036065 BolA-like superfamily AM378_24350 c529c2f521f51b03a2a8df2fb4472e43 104 Gene3D G3DSA:3.30.300.90 1 89 4.8E-34 T 15-10-2018 AM378_11795 a25b487809635ecfec31cab12a831443 224 TIGRFAM TIGR01957 nuoB_fam: NADH-quinone oxidoreductase, B subunit 46 182 6.9E-69 T 15-10-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM378_11795 a25b487809635ecfec31cab12a831443 224 Gene3D G3DSA:3.40.50.12280 24 192 1.3E-70 T 15-10-2018 AM378_11795 a25b487809635ecfec31cab12a831443 224 Hamap MF_01356 NAD(P)H-quinone oxidoreductase subunit K, chloroplastic [ndhK]. 27 181 41.923 T 15-10-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM378_11795 a25b487809635ecfec31cab12a831443 224 ProSitePatterns PS01150 Respiratory-chain NADH dehydrogenase 20 Kd subunit signature. 148 164 - T 15-10-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM378_11795 a25b487809635ecfec31cab12a831443 224 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 68 174 3.0E-22 T 15-10-2018 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM378_11795 a25b487809635ecfec31cab12a831443 224 SUPERFAMILY SSF56770 43 189 3.27E-64 T 15-10-2018 AM378_15380 a84fdf52b5717b4a909b0949d4a7560d 235 Hamap MF_00095 Sugar fermentation stimulation protein A [sfsA]. 1 234 55.822 T 15-10-2018 IPR005224 Sugar fermentation stimulation protein AM378_15380 a84fdf52b5717b4a909b0949d4a7560d 235 Gene3D G3DSA:2.40.50.580 1 80 3.4E-30 T 15-10-2018 AM378_15380 a84fdf52b5717b4a909b0949d4a7560d 235 TIGRFAM TIGR00230 sfsA: sugar fermentation stimulation protein 4 226 7.6E-81 T 15-10-2018 IPR005224 Sugar fermentation stimulation protein AM378_15380 a84fdf52b5717b4a909b0949d4a7560d 235 Pfam PF03749 Sugar fermentation stimulation protein 13 225 5.9E-76 T 15-10-2018 IPR005224 Sugar fermentation stimulation protein AM378_15380 a84fdf52b5717b4a909b0949d4a7560d 235 Gene3D G3DSA:3.40.1350.60 81 234 1.9E-54 T 15-10-2018 AM378_00735 8f51788a6a0137a4a11d1cce95730d13 241 SMART SM00382 26 213 1.2E-13 T 15-10-2018 IPR003593 AAA+ ATPase domain AM378_00735 8f51788a6a0137a4a11d1cce95730d13 241 PIRSF PIRSF039085 1 241 8.0E-104 T 15-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 AM378_00735 8f51788a6a0137a4a11d1cce95730d13 241 SUPERFAMILY SSF52540 1 235 1.33E-76 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_00735 8f51788a6a0137a4a11d1cce95730d13 241 Gene3D G3DSA:3.40.50.300 1 240 2.0E-75 T 15-10-2018 AM378_00735 8f51788a6a0137a4a11d1cce95730d13 241 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM378_00735 8f51788a6a0137a4a11d1cce95730d13 241 Pfam PF00005 ABC transporter 18 165 1.1E-33 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM378_17875 c55ee21396e7080efc3bb23488c22619 135 PIRSF PIRSF016821 8 135 2.8E-42 T 15-10-2018 IPR025708 Heat shock protein 15 GO:0003677|GO:0003727|GO:0034605|GO:0043023 AM378_17875 c55ee21396e7080efc3bb23488c22619 135 Pfam PF01479 S4 domain 11 56 3.2E-12 T 15-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM378_17875 c55ee21396e7080efc3bb23488c22619 135 Gene3D G3DSA:3.10.290.10 3 110 9.6E-38 T 15-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 AM378_17875 c55ee21396e7080efc3bb23488c22619 135 SMART SM00363 11 74 7.6E-9 T 15-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM378_17875 c55ee21396e7080efc3bb23488c22619 135 SUPERFAMILY SSF55174 11 105 2.09E-29 T 15-10-2018 AM378_02430 296dcf396d8affe71aa32d8faac1ac34 196 Gene3D G3DSA:1.10.10.10 114 195 1.7E-7 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_02430 296dcf396d8affe71aa32d8faac1ac34 196 SMART SM00421 138 195 0.0039 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM378_02430 296dcf396d8affe71aa32d8faac1ac34 196 SUPERFAMILY SSF46894 132 191 1.12E-8 T 15-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AM378_12340 e2ea4f175dda62d77db930140122e782 414 Pfam PF07350 Protein of unknown function (DUF1479) 8 413 9.0E-139 T 15-10-2018 IPR010856 Protein of unknown function DUF1479 AM378_12340 e2ea4f175dda62d77db930140122e782 414 Gene3D G3DSA:2.60.120.330 1 414 5.8E-157 T 15-10-2018 IPR027443 Isopenicillin N synthase-like AM378_12340 e2ea4f175dda62d77db930140122e782 414 SUPERFAMILY SSF51197 3 413 1.72E-147 T 15-10-2018 AM378_02095 c45295e380eb9d81cd4a29f0f528af8c 283 Gene3D G3DSA:3.40.630.30 3 150 1.7E-20 T 15-10-2018 AM378_02095 c45295e380eb9d81cd4a29f0f528af8c 283 SUPERFAMILY SSF55729 201 273 6.42E-10 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase AM378_02095 c45295e380eb9d81cd4a29f0f528af8c 283 Pfam PF00583 Acetyltransferase (GNAT) family 64 133 8.9E-13 T 15-10-2018 IPR000182 GNAT domain AM378_02095 c45295e380eb9d81cd4a29f0f528af8c 283 SUPERFAMILY SSF55729 18 141 3.88E-20 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase AM378_02095 c45295e380eb9d81cd4a29f0f528af8c 283 Gene3D G3DSA:3.40.630.30 151 277 4.0E-10 T 15-10-2018 AM378_13025 0cfcfc0ab9ade85893a7e3f54990131a 516 SUPERFAMILY SSF109604 314 507 2.26E-54 T 15-10-2018 AM378_13025 0cfcfc0ab9ade85893a7e3f54990131a 516 Gene3D G3DSA:1.10.3210.10 311 516 1.4E-80 T 15-10-2018 AM378_13025 0cfcfc0ab9ade85893a7e3f54990131a 516 Gene3D G3DSA:3.30.420.40 15 304 2.9E-95 T 15-10-2018 AM378_13025 0cfcfc0ab9ade85893a7e3f54990131a 516 Pfam PF02541 Ppx/GppA phosphatase family 27 309 2.4E-97 T 15-10-2018 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40 AM378_13025 0cfcfc0ab9ade85893a7e3f54990131a 516 SUPERFAMILY SSF53067 138 311 3.19E-47 T 15-10-2018 AM378_13025 0cfcfc0ab9ade85893a7e3f54990131a 516 PIRSF PIRSF001267 4 507 6.5E-202 T 15-10-2018 IPR030673 Pyrophosphatase, GppA/Ppx-type KEGG: 00230+3.6.1.40 AM378_13025 0cfcfc0ab9ade85893a7e3f54990131a 516 Gene3D G3DSA:3.30.420.150 118 296 2.9E-95 T 15-10-2018 AM378_13025 0cfcfc0ab9ade85893a7e3f54990131a 516 SUPERFAMILY SSF53067 14 134 2.69E-36 T 15-10-2018 AM378_13025 0cfcfc0ab9ade85893a7e3f54990131a 516 TIGRFAM TIGR03706 exo_poly_only: exopolyphosphatase 13 307 3.5E-98 T 15-10-2018 IPR022371 Exopolyphosphatase GO:0004309|GO:0006793 AM378_03100 207258ca3e769e84c36ef73bc6da61fd 170 Gene3D G3DSA:4.10.1230.10 113 170 1.2E-26 T 15-10-2018 IPR027438 Ecotin, C-terminal AM378_03100 207258ca3e769e84c36ef73bc6da61fd 170 SUPERFAMILY SSF49772 34 169 7.85E-56 T 15-10-2018 IPR036198 Ecotin superfamily AM378_03100 207258ca3e769e84c36ef73bc6da61fd 170 Hamap MF_00706 Ecotin [eco]. 4 170 37.721 T 15-10-2018 IPR023084 Proteinase inhibitor I11, ecotin, gammaproteobacteria AM378_03100 207258ca3e769e84c36ef73bc6da61fd 170 Pfam PF03974 Ecotin 38 160 1.4E-51 T 15-10-2018 IPR005658 Proteinase inhibitor I11, ecotin AM378_03100 207258ca3e769e84c36ef73bc6da61fd 170 Gene3D G3DSA:2.60.40.550 29 112 4.3E-34 T 15-10-2018 AM378_03100 207258ca3e769e84c36ef73bc6da61fd 170 PIRSF PIRSF006865 1 170 2.3E-63 T 15-10-2018 IPR005658 Proteinase inhibitor I11, ecotin AM378_17370 47aabe977580eb586ab84ffeb92f1928 314 Pfam PF02911 Formyl transferase, C-terminal domain 207 304 9.2E-33 T 15-10-2018 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AM378_17370 47aabe977580eb586ab84ffeb92f1928 314 Hamap MF_00182 Methionyl-tRNA formyltransferase [fmt]. 5 307 37.38 T 15-10-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 AM378_17370 47aabe977580eb586ab84ffeb92f1928 314 Gene3D G3DSA:3.40.50.170 1 209 7.3E-88 T 15-10-2018 AM378_17370 47aabe977580eb586ab84ffeb92f1928 314 SUPERFAMILY SSF50486 208 309 2.04E-37 T 15-10-2018 IPR011034 Formyl transferase-like, C-terminal domain superfamily GO:0003824 AM378_17370 47aabe977580eb586ab84ffeb92f1928 314 Pfam PF00551 Formyl transferase 6 183 3.0E-52 T 15-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AM378_17370 47aabe977580eb586ab84ffeb92f1928 314 Gene3D G3DSA:3.10.25.10 210 314 1.0E-38 T 15-10-2018 IPR037022 Formyl transferase, C-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AM378_17370 47aabe977580eb586ab84ffeb92f1928 314 TIGRFAM TIGR00460 fmt: methionyl-tRNA formyltransferase 5 312 1.5E-115 T 15-10-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 AM378_17370 47aabe977580eb586ab84ffeb92f1928 314 SUPERFAMILY SSF53328 5 207 3.92E-67 T 15-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AM378_10065 c48ac1d13f22fb8a938e641186cb901f 435 SUPERFAMILY SSF103473 7 428 1.44E-68 T 15-10-2018 IPR036259 MFS transporter superfamily AM378_10065 c48ac1d13f22fb8a938e641186cb901f 435 Gene3D G3DSA:1.20.1250.20 10 218 1.2E-40 T 15-10-2018 AM378_10065 c48ac1d13f22fb8a938e641186cb901f 435 Pfam PF07690 Major Facilitator Superfamily 26 390 3.5E-32 T 15-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM378_10065 c48ac1d13f22fb8a938e641186cb901f 435 Gene3D G3DSA:1.20.1250.20 240 431 6.0E-21 T 15-10-2018 AM378_15945 5a00e93ac3fc96546ec90806d24d61b0 194 Pfam PF05728 Uncharacterised protein family (UPF0227) 5 189 1.2E-69 T 15-10-2018 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA AM378_15945 5a00e93ac3fc96546ec90806d24d61b0 194 SUPERFAMILY SSF53474 4 189 1.85E-17 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold AM378_15945 5a00e93ac3fc96546ec90806d24d61b0 194 Gene3D G3DSA:3.40.50.1820 3 193 9.3E-62 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold AM378_04620 d515780fa6d26b78ab869fda156792ff 280 PIRSF PIRSF038992 1 280 5.9E-64 T 15-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 AM378_04620 d515780fa6d26b78ab869fda156792ff 280 Pfam PF01791 DeoC/LacD family aldolase 19 250 1.5E-39 T 15-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 AM378_04620 d515780fa6d26b78ab869fda156792ff 280 SMART SM01133 18 250 4.1E-12 T 15-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 AM378_04620 d515780fa6d26b78ab869fda156792ff 280 Gene3D G3DSA:3.20.20.70 1 280 4.1E-59 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM378_04620 d515780fa6d26b78ab869fda156792ff 280 SUPERFAMILY SSF51569 6 266 1.06E-52 T 15-10-2018 AM378_21445 9bc829cfe1a96aab971b050047fc4e38 167 Gene3D G3DSA:3.40.630.30 1 167 6.1E-49 T 15-10-2018 AM378_21445 9bc829cfe1a96aab971b050047fc4e38 167 Pfam PF13508 Acetyltransferase (GNAT) domain 45 124 3.8E-7 T 15-10-2018 IPR000182 GNAT domain AM378_21445 9bc829cfe1a96aab971b050047fc4e38 167 SUPERFAMILY SSF55729 1 158 1.17E-21 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase AM378_22485 222c909bb340f7c4646250c326f0e97a 478 Pfam PF01235 Sodium:alanine symporter family 48 453 8.2E-160 T 15-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AM378_22485 222c909bb340f7c4646250c326f0e97a 478 PRINTS PR00175 Sodium/alanine symporter signature 178 196 5.9E-56 T 15-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AM378_22485 222c909bb340f7c4646250c326f0e97a 478 PRINTS PR00175 Sodium/alanine symporter signature 303 321 5.9E-56 T 15-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AM378_22485 222c909bb340f7c4646250c326f0e97a 478 PRINTS PR00175 Sodium/alanine symporter signature 350 372 5.9E-56 T 15-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AM378_22485 222c909bb340f7c4646250c326f0e97a 478 PRINTS PR00175 Sodium/alanine symporter signature 87 109 5.9E-56 T 15-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AM378_22485 222c909bb340f7c4646250c326f0e97a 478 PRINTS PR00175 Sodium/alanine symporter signature 206 225 5.9E-56 T 15-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AM378_22485 222c909bb340f7c4646250c326f0e97a 478 PRINTS PR00175 Sodium/alanine symporter signature 411 431 5.9E-56 T 15-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AM378_22485 222c909bb340f7c4646250c326f0e97a 478 ProSitePatterns PS00873 Sodium:alanine symporter family signature. 87 102 - T 15-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AM378_22485 222c909bb340f7c4646250c326f0e97a 478 TIGRFAM TIGR00835 agcS: amino acid carrier protein 13 442 1.6E-160 T 15-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AM378_11915 949d9600ddfbae317a1aef6eaffd9202 257 Gene3D G3DSA:3.40.50.300 1 257 1.5E-84 T 15-10-2018 AM378_11915 949d9600ddfbae317a1aef6eaffd9202 257 SMART SM00382 30 229 6.5E-15 T 15-10-2018 IPR003593 AAA+ ATPase domain AM378_11915 949d9600ddfbae317a1aef6eaffd9202 257 SUPERFAMILY SSF52540 6 251 4.02E-74 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_11915 949d9600ddfbae317a1aef6eaffd9202 257 Pfam PF00005 ABC transporter 21 181 1.1E-33 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM378_11915 949d9600ddfbae317a1aef6eaffd9202 257 PIRSF PIRSF039085 2 257 2.7E-120 T 15-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 AM378_11915 949d9600ddfbae317a1aef6eaffd9202 257 ProSitePatterns PS00211 ABC transporters family signature. 153 167 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM378_24000 1b48574180ebde91d5f9c880f626da15 94 Pfam PF07338 Protein of unknown function (DUF1471) 38 94 6.6E-20 T 15-10-2018 IPR010854 Domain of unknown function DUF1471 AM378_24000 1b48574180ebde91d5f9c880f626da15 94 Gene3D G3DSA:3.30.1660.10 26 94 2.1E-19 T 15-10-2018 IPR025543 Dodecin-like AM378_24000 1b48574180ebde91d5f9c880f626da15 94 SUPERFAMILY SSF159871 4 94 1.7E-22 T 15-10-2018 IPR036275 YdgH-like superfamily AM378_02985 b4f88f7c22240261ed2c4387695d24ab 381 Gene3D G3DSA:3.90.1150.10 248 381 6.8E-60 T 15-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AM378_02985 b4f88f7c22240261ed2c4387695d24ab 381 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 188 202 - T 15-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 AM378_02985 b4f88f7c22240261ed2c4387695d24ab 381 PIRSF PIRSF001434 1 381 3.5E-148 T 15-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 AM378_02985 b4f88f7c22240261ed2c4387695d24ab 381 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 5 379 5.3E-152 T 15-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 AM378_02985 b4f88f7c22240261ed2c4387695d24ab 381 SUPERFAMILY SSF53383 15 380 1.06E-114 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM378_02985 b4f88f7c22240261ed2c4387695d24ab 381 Gene3D G3DSA:3.40.640.10 2 247 1.8E-90 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AM378_11370 5d9c3d9de2aca17a7174fd5d093e0957 824 Pfam PF01568 Molydopterin dinucleotide binding domain 681 795 3.4E-24 T 15-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 AM378_11370 5d9c3d9de2aca17a7174fd5d093e0957 824 TIGRFAM TIGR00509 bisC_fam: molybdopterin guanine dinucleotide-containing S/N-oxide reductases 60 821 0.0 T 15-10-2018 IPR006658 Molybdopterin guanine dinucleotide-containing S/N-oxide reductase GO:0016491|GO:0055114 AM378_11370 5d9c3d9de2aca17a7174fd5d093e0957 824 Gene3D G3DSA:2.40.40.20 655 818 1.0E-50 T 15-10-2018 AM378_11370 5d9c3d9de2aca17a7174fd5d093e0957 824 Gene3D G3DSA:3.90.55.10 101 621 5.9E-234 T 15-10-2018 AM378_11370 5d9c3d9de2aca17a7174fd5d093e0957 824 Gene3D G3DSA:3.40.228.10 196 647 5.9E-234 T 15-10-2018 AM378_11370 5d9c3d9de2aca17a7174fd5d093e0957 824 SUPERFAMILY SSF53706 61 681 1.31E-172 T 15-10-2018 AM378_11370 5d9c3d9de2aca17a7174fd5d093e0957 824 SUPERFAMILY SSF50692 673 819 2.03E-39 T 15-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily AM378_11370 5d9c3d9de2aca17a7174fd5d093e0957 824 Gene3D G3DSA:3.40.50.740 103 570 5.9E-234 T 15-10-2018 AM378_11370 5d9c3d9de2aca17a7174fd5d093e0957 824 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 504 521 - T 15-10-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 AM378_11370 5d9c3d9de2aca17a7174fd5d093e0957 824 Pfam PF10518 TAT (twin-arginine translocation) pathway signal sequence 9 32 1.3E-5 T 15-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal AM378_11370 5d9c3d9de2aca17a7174fd5d093e0957 824 Pfam PF00384 Molybdopterin oxidoreductase 103 561 2.3E-94 T 15-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM378_08210 2d5bd734269421545bd9b36c460344a5 501 SMART SM00382 38 227 6.9E-10 T 15-10-2018 IPR003593 AAA+ ATPase domain AM378_08210 2d5bd734269421545bd9b36c460344a5 501 SMART SM00382 287 481 4.1E-4 T 15-10-2018 IPR003593 AAA+ ATPase domain AM378_08210 2d5bd734269421545bd9b36c460344a5 501 Gene3D G3DSA:3.40.50.300 270 499 1.5E-45 T 15-10-2018 AM378_08210 2d5bd734269421545bd9b36c460344a5 501 SUPERFAMILY SSF52540 263 490 1.47E-46 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_08210 2d5bd734269421545bd9b36c460344a5 501 Gene3D G3DSA:3.40.50.300 7 258 4.5E-56 T 15-10-2018 AM378_08210 2d5bd734269421545bd9b36c460344a5 501 SUPERFAMILY SSF52540 12 239 3.24E-55 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_08210 2d5bd734269421545bd9b36c460344a5 501 Pfam PF00005 ABC transporter 279 432 1.0E-21 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM378_08210 2d5bd734269421545bd9b36c460344a5 501 ProSitePatterns PS00211 ABC transporters family signature. 405 419 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM378_08210 2d5bd734269421545bd9b36c460344a5 501 Pfam PF00005 ABC transporter 29 179 6.2E-26 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM378_17140 e6ce155952132b008c84c8577cfc6c28 327 Gene3D G3DSA:3.90.245.10 1 327 1.0E-76 T 15-10-2018 IPR036452 Ribonucleoside hydrolase-like AM378_17140 e6ce155952132b008c84c8577cfc6c28 327 SUPERFAMILY SSF53590 2 324 1.18E-68 T 15-10-2018 IPR036452 Ribonucleoside hydrolase-like AM378_17140 e6ce155952132b008c84c8577cfc6c28 327 Pfam PF01156 Inosine-uridine preferring nucleoside hydrolase 2 317 1.7E-62 T 15-10-2018 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain AM378_05235 1b4f7690f261d48e2da8a2444014a318 333 SMART SM00354 1 73 1.4E-21 T 15-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM378_05235 1b4f7690f261d48e2da8a2444014a318 333 SUPERFAMILY SSF47413 1 56 5.27E-16 T 15-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AM378_05235 1b4f7690f261d48e2da8a2444014a318 333 SUPERFAMILY SSF53822 63 332 1.25E-41 T 15-10-2018 IPR028082 Periplasmic binding protein-like I AM378_05235 1b4f7690f261d48e2da8a2444014a318 333 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 4.4E-5 T 15-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM378_05235 1b4f7690f261d48e2da8a2444014a318 333 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 4.4E-5 T 15-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM378_05235 1b4f7690f261d48e2da8a2444014a318 333 Gene3D G3DSA:3.40.50.2300 161 297 9.3E-46 T 15-10-2018 AM378_05235 1b4f7690f261d48e2da8a2444014a318 333 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 15-10-2018 AM378_05235 1b4f7690f261d48e2da8a2444014a318 333 Gene3D G3DSA:1.10.260.40 1 57 1.4E-19 T 15-10-2018 AM378_05235 1b4f7690f261d48e2da8a2444014a318 333 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 64 329 2.6E-51 T 15-10-2018 IPR001761 Periplasmic binding protein/LacI sugar binding domain AM378_05235 1b4f7690f261d48e2da8a2444014a318 333 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 6.4E-17 T 15-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM378_05235 1b4f7690f261d48e2da8a2444014a318 333 Gene3D G3DSA:3.40.50.2300 71 313 9.3E-46 T 15-10-2018 AM378_24115 cc7f219220882b81d33d8e85a5d9121e 304 Pfam PF00480 ROK family 3 301 1.0E-86 T 15-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 AM378_24115 cc7f219220882b81d33d8e85a5d9121e 304 Gene3D G3DSA:3.30.420.40 119 289 9.5E-81 T 15-10-2018 AM378_24115 cc7f219220882b81d33d8e85a5d9121e 304 Gene3D G3DSA:3.30.420.40 4 296 9.5E-81 T 15-10-2018 AM378_24115 cc7f219220882b81d33d8e85a5d9121e 304 ProSitePatterns PS01125 ROK family signature. 130 157 - T 15-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 AM378_24115 cc7f219220882b81d33d8e85a5d9121e 304 SUPERFAMILY SSF53067 2 301 6.02E-62 T 15-10-2018 AM378_20665 fac0a1a880bc73ad2f0811c6163f9347 377 TIGRFAM TIGR02351 thiH: thiazole biosynthesis protein ThiH 5 369 1.8E-161 T 15-10-2018 IPR012726 Thiazole biosynthesis ThiH GO:0005506|GO:0009228|GO:0051539 KEGG: 00730+4.1.99.19|MetaCyc: PWY-6892 AM378_20665 fac0a1a880bc73ad2f0811c6163f9347 377 Gene3D G3DSA:3.20.20.70 13 367 1.4E-104 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM378_20665 fac0a1a880bc73ad2f0811c6163f9347 377 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 259 362 1.0E-23 T 15-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 AM378_20665 fac0a1a880bc73ad2f0811c6163f9347 377 Pfam PF04055 Radical SAM superfamily 83 221 1.3E-8 T 15-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AM378_20665 fac0a1a880bc73ad2f0811c6163f9347 377 SUPERFAMILY SSF102114 37 365 4.45E-55 T 15-10-2018 AM378_20665 fac0a1a880bc73ad2f0811c6163f9347 377 SMART SM00876 259 363 4.1E-31 T 15-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 AM378_08815 1df4fe5b9bb3808ece1ca1bb7131f422 102 SMART SM01022 5 101 2.0E-28 T 15-10-2018 IPR007374 ASCH domain AM378_08815 1df4fe5b9bb3808ece1ca1bb7131f422 102 Pfam PF04266 ASCH domain 6 98 6.7E-16 T 15-10-2018 IPR007374 ASCH domain AM378_08815 1df4fe5b9bb3808ece1ca1bb7131f422 102 Hamap MF_00684 UPF0267 protein YqfB [yqfB]. 1 102 31.883 T 15-10-2018 IPR008314 Uncharacterised conserved protein UCP029143 AM378_08815 1df4fe5b9bb3808ece1ca1bb7131f422 102 SUPERFAMILY SSF88697 2 99 1.99E-34 T 15-10-2018 IPR015947 PUA-like superfamily AM378_08815 1df4fe5b9bb3808ece1ca1bb7131f422 102 PIRSF PIRSF029143 1 102 4.6E-48 T 15-10-2018 IPR008314 Uncharacterised conserved protein UCP029143 AM378_08815 1df4fe5b9bb3808ece1ca1bb7131f422 102 Gene3D G3DSA:2.30.130.30 1 101 2.6E-44 T 15-10-2018 AM378_05200 f84daa45c171dc8d2e9250359ba42e09 176 TIGRFAM TIGR01806 CM_mono2: putative chorismate mutase 24 129 2.6E-38 T 15-10-2018 IPR008240 Chorismate mutase, periplasmic KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 AM378_05200 f84daa45c171dc8d2e9250359ba42e09 176 Pfam PF01817 Chorismate mutase type II 23 92 6.4E-9 T 15-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 AM378_05200 f84daa45c171dc8d2e9250359ba42e09 176 SUPERFAMILY SSF48600 24 170 9.16E-35 T 15-10-2018 IPR036263 Chorismate mutase type II superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 AM378_05200 f84daa45c171dc8d2e9250359ba42e09 176 PIRSF PIRSF026640 1 173 4.6E-51 T 15-10-2018 IPR008240 Chorismate mutase, periplasmic KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 AM378_05200 f84daa45c171dc8d2e9250359ba42e09 176 SMART SM00830 21 94 1.7E-12 T 15-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 AM378_05200 f84daa45c171dc8d2e9250359ba42e09 176 Gene3D G3DSA:1.20.140.170 21 172 5.2E-56 T 15-10-2018 AM378_02315 400bd4c1833f1198ed36379efec90b32 255 Pfam PF00174 Oxidoreductase molybdopterin binding domain 100 244 1.3E-34 T 15-10-2018 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 AM378_02315 400bd4c1833f1198ed36379efec90b32 255 Gene3D G3DSA:3.90.420.10 77 254 2.3E-50 T 15-10-2018 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily GO:0042128 Reactome: R-HSA-1614517 AM378_02315 400bd4c1833f1198ed36379efec90b32 255 SUPERFAMILY SSF56524 53 254 2.35E-64 T 15-10-2018 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily GO:0042128 Reactome: R-HSA-1614517 AM378_17130 88caa1d5a3a421b85bf2799780c093f9 460 SUPERFAMILY SSF103473 19 454 3.14E-68 T 15-10-2018 IPR036259 MFS transporter superfamily AM378_17130 88caa1d5a3a421b85bf2799780c093f9 460 Pfam PF00083 Sugar (and other) transporter 78 454 7.6E-27 T 15-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 AM378_17130 88caa1d5a3a421b85bf2799780c093f9 460 Gene3D G3DSA:1.20.1250.20 31 458 8.5E-68 T 15-10-2018 AM378_10420 1aec56b3ddb12817bb568df794a5bad9 71 ProDom PD054490 GLYCOGEN GLGS SYNTHESIS BIOSYNTHESIS DEPENDENT BIOSYNTHESIS RPOS 3D-STRUCTURE 14 59 0.004 T 15-10-2018 IPR015065 Surface composition regulator AM378_10420 1aec56b3ddb12817bb568df794a5bad9 71 Hamap MF_00525 Surface composition regulator [glgS]. 6 64 18.283 T 15-10-2018 IPR015065 Surface composition regulator AM378_10420 1aec56b3ddb12817bb568df794a5bad9 71 Gene3D G3DSA:1.20.970.20 6 70 8.4E-13 T 15-10-2018 IPR036295 GlgS superfamily AM378_10420 1aec56b3ddb12817bb568df794a5bad9 71 Pfam PF08971 Glycogen synthesis protein 6 69 7.3E-26 T 15-10-2018 IPR015065 Surface composition regulator AM378_10420 1aec56b3ddb12817bb568df794a5bad9 71 SUPERFAMILY SSF109747 15 64 2.75E-8 T 15-10-2018 IPR036295 GlgS superfamily AM378_12325 d68a0f1da2274472522cf3aa131b3bab 174 SUPERFAMILY SSF81342 3 174 1.65E-28 T 15-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 AM378_12325 d68a0f1da2274472522cf3aa131b3bab 174 Pfam PF01292 Prokaryotic cytochrome b561 4 173 2.5E-25 T 15-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 AM378_16805 f694c74aaa683e8ccf59bb091271fda4 303 Pfam PF03466 LysR substrate binding domain 89 291 5.1E-38 T 15-10-2018 IPR005119 LysR, substrate-binding AM378_16805 f694c74aaa683e8ccf59bb091271fda4 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 3.1E-20 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_16805 f694c74aaa683e8ccf59bb091271fda4 303 SUPERFAMILY SSF53850 90 295 1.02E-39 T 15-10-2018 AM378_16805 f694c74aaa683e8ccf59bb091271fda4 303 Gene3D G3DSA:1.10.10.10 3 89 2.7E-28 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_16805 f694c74aaa683e8ccf59bb091271fda4 303 Gene3D G3DSA:3.40.190.290 91 293 2.9E-53 T 15-10-2018 AM378_16805 f694c74aaa683e8ccf59bb091271fda4 303 SUPERFAMILY SSF46785 4 109 1.56E-23 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM378_02380 b8f33242d3167e9fa7b42ffdbe1d7603 237 SUPERFAMILY SSF52172 3 130 1.71E-40 T 15-10-2018 IPR011006 CheY-like superfamily AM378_02380 b8f33242d3167e9fa7b42ffdbe1d7603 237 SUPERFAMILY SSF46894 128 232 1.28E-32 T 15-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AM378_02380 b8f33242d3167e9fa7b42ffdbe1d7603 237 Pfam PF00072 Response regulator receiver domain 7 116 5.3E-26 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM378_02380 b8f33242d3167e9fa7b42ffdbe1d7603 237 SMART SM00862 155 231 4.7E-28 T 15-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AM378_02380 b8f33242d3167e9fa7b42ffdbe1d7603 237 Pfam PF00486 Transcriptional regulatory protein, C terminal 155 231 2.6E-27 T 15-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AM378_02380 b8f33242d3167e9fa7b42ffdbe1d7603 237 Gene3D G3DSA:1.10.10.10 124 236 2.8E-39 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_02380 b8f33242d3167e9fa7b42ffdbe1d7603 237 SMART SM00448 5 116 1.4E-41 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM378_02380 b8f33242d3167e9fa7b42ffdbe1d7603 237 Gene3D G3DSA:3.40.50.2300 1 123 2.6E-36 T 15-10-2018 AM378_09490 3e8e7f28d996f3239e6ee437e383150b 432 TIGRFAM TIGR01412 tat_substr_1: Tat-translocated enzyme 16 430 2.2E-173 T 15-10-2018 IPR006313 Deferrochelatase/peroxidase EfeB GO:0004601|GO:0015684|GO:0020037|GO:0033212 AM378_09490 3e8e7f28d996f3239e6ee437e383150b 432 Pfam PF04261 Dyp-type peroxidase family 71 419 4.7E-116 T 15-10-2018 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 AM378_09490 3e8e7f28d996f3239e6ee437e383150b 432 SUPERFAMILY SSF54909 64 424 1.97E-99 T 15-10-2018 IPR011008 Dimeric alpha-beta barrel AM378_09490 3e8e7f28d996f3239e6ee437e383150b 432 TIGRFAM TIGR01413 Dyp_perox_fam: Dyp-type peroxidase family 71 419 1.0E-101 T 15-10-2018 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 AM378_23480 66562268bfa64bf1fed739e01fcefc25 279 Pfam PF01418 Helix-turn-helix domain, rpiR family 6 72 5.3E-11 T 15-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 AM378_23480 66562268bfa64bf1fed739e01fcefc25 279 SUPERFAMILY SSF46689 3 79 3.94E-18 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AM378_23480 66562268bfa64bf1fed739e01fcefc25 279 SUPERFAMILY SSF53697 96 252 1.6E-14 T 15-10-2018 AM378_23480 66562268bfa64bf1fed739e01fcefc25 279 Gene3D G3DSA:1.10.10.10 2 76 9.7E-18 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_23480 66562268bfa64bf1fed739e01fcefc25 279 Gene3D G3DSA:3.40.50.10490 90 273 1.4E-28 T 15-10-2018 AM378_23480 66562268bfa64bf1fed739e01fcefc25 279 Pfam PF01380 SIS domain 124 247 1.2E-12 T 15-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 AM378_03995 a0c90ebb113750e8cdd97ac91ae3bf25 315 Gene3D G3DSA:3.10.310.10 140 292 3.5E-109 T 15-10-2018 AM378_03995 a0c90ebb113750e8cdd97ac91ae3bf25 315 PIRSF PIRSF029792 5 315 1.1E-92 T 15-10-2018 IPR008794 Proline racemase family AM378_03995 a0c90ebb113750e8cdd97ac91ae3bf25 315 Gene3D G3DSA:3.10.310.10 12 310 3.5E-109 T 15-10-2018 AM378_03995 a0c90ebb113750e8cdd97ac91ae3bf25 315 SUPERFAMILY SSF54506 9 314 1.05E-93 T 15-10-2018 AM378_03995 a0c90ebb113750e8cdd97ac91ae3bf25 315 Pfam PF05544 Proline racemase 13 314 7.9E-95 T 15-10-2018 IPR008794 Proline racemase family AM378_19370 4ad7071e8b924bae30e5eccd70f61968 134 SUPERFAMILY SSF55811 11 116 1.62E-19 T 15-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 AM378_19370 4ad7071e8b924bae30e5eccd70f61968 134 Pfam PF00293 NUDIX domain 14 113 1.2E-12 T 15-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 AM378_19370 4ad7071e8b924bae30e5eccd70f61968 134 ProSitePatterns PS00893 Nudix box signature. 35 56 - T 15-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 AM378_19370 4ad7071e8b924bae30e5eccd70f61968 134 Gene3D G3DSA:3.90.79.10 1 132 9.3E-21 T 15-10-2018 AM378_22270 2abf59a01372936f365bc4d3922023e4 330 Pfam PF00248 Aldo/keto reductase family 16 308 9.0E-83 T 15-10-2018 IPR023210 NADP-dependent oxidoreductase domain AM378_22270 2abf59a01372936f365bc4d3922023e4 330 SUPERFAMILY SSF51430 1 310 1.57E-103 T 15-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily AM378_22270 2abf59a01372936f365bc4d3922023e4 330 Gene3D G3DSA:3.20.20.100 1 329 1.0E-123 T 15-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily AM378_20645 e4fb271f9892f26daf88e26a28172f94 154 SUPERFAMILY SSF56524 29 153 3.79E-12 T 15-10-2018 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily GO:0042128 Reactome: R-HSA-1614517 AM378_04210 880765f6e9d5419609db9b6b5212fd97 517 Pfam PF00854 POT family 91 464 6.9E-63 T 15-10-2018 IPR000109 Proton-dependent oligopeptide transporter family GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-427975 AM378_04210 880765f6e9d5419609db9b6b5212fd97 517 ProSitePatterns PS01022 PTR2 family proton/oligopeptide symporters signature 1. 79 103 - T 15-10-2018 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: R-HSA-427975 AM378_04210 880765f6e9d5419609db9b6b5212fd97 517 TIGRFAM TIGR00924 yjdL_sub1_fam: amino acid/peptide transporter (Peptide:H+ symporter) 11 501 1.2E-111 T 15-10-2018 IPR005279 Dipeptide/tripeptide permease GO:0015833|GO:0016020|GO:1904680 AM378_04210 880765f6e9d5419609db9b6b5212fd97 517 ProSitePatterns PS01023 PTR2 family proton/oligopeptide symporters signature 2. 155 167 - T 15-10-2018 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: R-HSA-427975 AM378_04210 880765f6e9d5419609db9b6b5212fd97 517 Gene3D G3DSA:1.20.1250.20 1 502 3.4E-157 T 15-10-2018 AM378_04210 880765f6e9d5419609db9b6b5212fd97 517 SUPERFAMILY SSF103473 13 499 2.01E-32 T 15-10-2018 IPR036259 MFS transporter superfamily AM378_00340 2a71b051afc965bce856fd2dc491a80a 245 Gene3D G3DSA:1.20.58.480 1 245 3.8E-76 T 15-10-2018 AM378_00340 2a71b051afc965bce856fd2dc491a80a 245 SUPERFAMILY SSF140959 2 243 1.2E-63 T 15-10-2018 IPR037217 Tryptophan/Indoleamine 2,3-dioxygenase-like GO:0019441|GO:0020037|GO:0046872 KEGG: 00380+1.13.11.11|Reactome: R-HSA-71240 AM378_00340 2a71b051afc965bce856fd2dc491a80a 245 Pfam PF03301 Tryptophan 2,3-dioxygenase 187 243 9.8E-17 T 15-10-2018 IPR004981 Tryptophan 2,3-dioxygenase GO:0004833|GO:0019441|GO:0020037 KEGG: 00380+1.13.11.11|Reactome: R-HSA-71240 AM378_00340 2a71b051afc965bce856fd2dc491a80a 245 Pfam PF03301 Tryptophan 2,3-dioxygenase 1 139 3.7E-31 T 15-10-2018 IPR004981 Tryptophan 2,3-dioxygenase GO:0004833|GO:0019441|GO:0020037 KEGG: 00380+1.13.11.11|Reactome: R-HSA-71240 AM378_01870 b3a5d512a8656eb3b93935e26f0f7bc4 299 TIGRFAM TIGR01097 PhnE: phosphonate ABC transporter, permease protein PhnE 32 283 9.1E-78 T 15-10-2018 IPR005769 ABC transporter, permease PhnE/PtxC GO:0005887|GO:0015604|GO:0015716 AM378_01870 b3a5d512a8656eb3b93935e26f0f7bc4 299 SUPERFAMILY SSF161098 86 275 3.11E-25 T 15-10-2018 IPR035906 MetI-like superfamily AM378_01870 b3a5d512a8656eb3b93935e26f0f7bc4 299 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 109 271 1.5E-6 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AM378_01870 b3a5d512a8656eb3b93935e26f0f7bc4 299 Gene3D G3DSA:1.10.3720.10 82 283 3.5E-23 T 15-10-2018 IPR035906 MetI-like superfamily AM378_17175 1d477799cb98a917856ffbc48ac1b69f 296 Gene3D G3DSA:1.10.3720.10 1 283 2.7E-74 T 15-10-2018 IPR035906 MetI-like superfamily AM378_17175 1d477799cb98a917856ffbc48ac1b69f 296 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 106 286 9.4E-16 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AM378_17175 1d477799cb98a917856ffbc48ac1b69f 296 SUPERFAMILY SSF161098 8 296 1.03E-69 T 15-10-2018 IPR035906 MetI-like superfamily AM378_00455 ccfc4cad802ca1cbb31e6e04f48ba807 349 SUPERFAMILY SSF89733 1 334 4.19E-111 T 15-10-2018 IPR036111 Malate/L-sulfolactate/L-lactate dehydrogenase-like superfamily GO:0016491|GO:0055114 AM378_00455 ccfc4cad802ca1cbb31e6e04f48ba807 349 Gene3D G3DSA:1.10.1530.10 8 325 1.9E-119 T 15-10-2018 AM378_00455 ccfc4cad802ca1cbb31e6e04f48ba807 349 TIGRFAM TIGR03175 AllD: ureidoglycolate dehydrogenase 1 348 8.5E-186 T 15-10-2018 IPR017590 Ureidoglycolate dehydrogenase KEGG: 00230+1.1.1.350 AM378_00455 ccfc4cad802ca1cbb31e6e04f48ba807 349 Pfam PF02615 Malate/L-lactate dehydrogenase 3 331 1.3E-115 T 15-10-2018 IPR003767 Malate/L-lactate dehydrogenase-like GO:0016491|GO:0055114 AM378_00455 ccfc4cad802ca1cbb31e6e04f48ba807 349 Gene3D G3DSA:3.30.1370.60 67 305 1.9E-119 T 15-10-2018 AM378_19920 152751342f9139529179f454398fb6ed 63 ProDom PD053230 YHJR ECS4415 STY4179 CYTOPLASMIC 17 58 8.0E-9 T 15-10-2018 IPR024487 Protein YhjR AM378_19920 152751342f9139529179f454398fb6ed 63 Pfam PF10945 Cellulose biosynthesis protein BcsR 16 57 7.2E-23 T 15-10-2018 IPR024487 Protein YhjR AM378_02160 409e9a5582d83cd5ba80c6c390696db7 279 Pfam PF13560 Helix-turn-helix domain 12 91 5.0E-15 T 15-10-2018 AM378_02160 409e9a5582d83cd5ba80c6c390696db7 279 SUPERFAMILY SSF47413 36 84 6.57E-6 T 15-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AM378_02160 409e9a5582d83cd5ba80c6c390696db7 279 SMART SM00530 16 88 1.5E-6 T 15-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM378_02160 409e9a5582d83cd5ba80c6c390696db7 279 Gene3D G3DSA:1.10.260.40 18 89 8.2E-6 T 15-10-2018 AM378_02160 409e9a5582d83cd5ba80c6c390696db7 279 Gene3D G3DSA:3.30.450.180 113 277 7.3E-13 T 15-10-2018 AM378_13550 de63caad2004c4b55c17871dcb4d6d1d 455 Pfam PF02378 Phosphotransferase system, EIIC 119 393 1.8E-33 T 15-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 AM378_13550 de63caad2004c4b55c17871dcb4d6d1d 455 Pfam PF00367 phosphotransferase system, EIIB 10 40 7.0E-11 T 15-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 AM378_13550 de63caad2004c4b55c17871dcb4d6d1d 455 SUPERFAMILY SSF55604 7 81 1.07E-16 T 15-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 AM378_13550 de63caad2004c4b55c17871dcb4d6d1d 455 Gene3D G3DSA:3.30.1360.60 3 84 1.1E-18 T 15-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 AM378_13550 de63caad2004c4b55c17871dcb4d6d1d 455 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 20 37 - T 15-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 AM378_20120 bc05883357bccee57142ed6fc25753eb 68 Pfam PF13627 Prokaryotic lipoprotein-attachment site 8 29 5.7E-9 T 15-10-2018 IPR032831 Prokaryotic lipoprotein-attachment site AM378_10530 ef9b206f824c8efef91eda0a2b080e7e 477 PIRSF PIRSF006603 19 476 4.0E-69 T 15-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AM378_10530 ef9b206f824c8efef91eda0a2b080e7e 477 TIGRFAM TIGR00797 matE: MATE efflux family protein 37 441 6.3E-65 T 15-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AM378_10530 ef9b206f824c8efef91eda0a2b080e7e 477 Pfam PF01554 MatE 267 427 5.5E-19 T 15-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AM378_10530 ef9b206f824c8efef91eda0a2b080e7e 477 Pfam PF01554 MatE 37 197 8.0E-35 T 15-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AM378_03170 7c507384bb4d3e44cbd5d86c972d91a5 67 Pfam PF10893 Protein of unknown function (DUF2724) 3 37 7.2E-8 T 15-10-2018 IPR021221 Bacteriophage 186, Fil AM378_22110 ae3e89cf28cd9dcce695ffc6aaea573b 150 PRINTS PR00598 Bacterial regulatory protein MarR family signature 63 78 1.8E-5 T 15-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AM378_22110 ae3e89cf28cd9dcce695ffc6aaea573b 150 PRINTS PR00598 Bacterial regulatory protein MarR family signature 82 98 1.8E-5 T 15-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AM378_22110 ae3e89cf28cd9dcce695ffc6aaea573b 150 PRINTS PR00598 Bacterial regulatory protein MarR family signature 112 132 1.8E-5 T 15-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AM378_22110 ae3e89cf28cd9dcce695ffc6aaea573b 150 SUPERFAMILY SSF46785 4 135 3.1E-27 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM378_22110 ae3e89cf28cd9dcce695ffc6aaea573b 150 SMART SM00347 22 122 1.4E-21 T 15-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AM378_22110 ae3e89cf28cd9dcce695ffc6aaea573b 150 TIGRFAM TIGR02337 HpaR: homoprotocatechuate degradation operon regulator, HpaR 4 133 3.6E-55 T 15-10-2018 IPR012712 Homoprotocatechuate degradation transcriptional regulator HpaR GO:0003677|GO:0010124|GO:0045892 AM378_22110 ae3e89cf28cd9dcce695ffc6aaea573b 150 Pfam PF01047 MarR family 29 86 2.8E-10 T 15-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AM378_22110 ae3e89cf28cd9dcce695ffc6aaea573b 150 Gene3D G3DSA:1.10.10.10 1 133 4.3E-29 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_10455 ebda9e02e712a265dc09ce3876b1652e 672 Pfam PF07715 TonB-dependent Receptor Plug Domain 11 120 1.0E-23 T 15-10-2018 IPR012910 TonB-dependent receptor, plug domain AM378_10455 ebda9e02e712a265dc09ce3876b1652e 672 Gene3D G3DSA:2.170.130.10 2 125 3.4E-24 T 15-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily AM378_10455 ebda9e02e712a265dc09ce3876b1652e 672 SUPERFAMILY SSF56935 2 669 3.66E-121 T 15-10-2018 AM378_10455 ebda9e02e712a265dc09ce3876b1652e 672 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 13 666 6.0E-71 T 15-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 AM378_10455 ebda9e02e712a265dc09ce3876b1652e 672 Gene3D G3DSA:2.40.170.20 141 671 7.5E-103 T 15-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AM378_10455 ebda9e02e712a265dc09ce3876b1652e 672 Pfam PF00593 TonB dependent receptor 200 667 3.5E-55 T 15-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel AM378_19475 97552168a97c1077e4cf420fa342a118 137 Hamap MF_02000 Small heat shock protein IbpA [ibpA]. 1 137 43.871 T 15-10-2018 IPR023728 Small heat shock protein IbpA AM378_19475 97552168a97c1077e4cf420fa342a118 137 Pfam PF00011 Hsp20/alpha crystallin family 42 137 5.9E-21 T 15-10-2018 IPR002068 Alpha crystallin/Hsp20 domain AM378_19475 97552168a97c1077e4cf420fa342a118 137 Gene3D G3DSA:2.60.40.790 33 137 8.5E-21 T 15-10-2018 IPR008978 HSP20-like chaperone AM378_19475 97552168a97c1077e4cf420fa342a118 137 SUPERFAMILY SSF49764 31 137 3.84E-20 T 15-10-2018 IPR008978 HSP20-like chaperone AM378_11445 8156df09a3b79736899afba61632971a 341 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 7 46 1.2E-6 T 15-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain AM378_11445 8156df09a3b79736899afba61632971a 341 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 158 338 4.2E-26 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AM378_11445 8156df09a3b79736899afba61632971a 341 SUPERFAMILY SSF161098 135 321 3.4E-17 T 15-10-2018 IPR035906 MetI-like superfamily AM378_11445 8156df09a3b79736899afba61632971a 341 Gene3D G3DSA:1.10.3720.10 131 335 4.9E-15 T 15-10-2018 IPR035906 MetI-like superfamily AM378_04745 0035c73c278bd1edd8a67adc2c8890ba 844 Gene3D G3DSA:2.60.40.2610 671 761 5.7E-29 T 15-10-2018 AM378_04745 0035c73c278bd1edd8a67adc2c8890ba 844 SUPERFAMILY SSF141729 31 147 1.31E-26 T 15-10-2018 IPR037224 PapC, N-terminal domain superfamily GO:0005515 AM378_04745 0035c73c278bd1edd8a67adc2c8890ba 844 Pfam PF13954 PapC N-terminal domain 32 169 1.3E-35 T 15-10-2018 IPR025885 PapC, N-terminal domain GO:0005515 AM378_04745 0035c73c278bd1edd8a67adc2c8890ba 844 Gene3D G3DSA:3.10.20.410 30 147 3.6E-25 T 15-10-2018 AM378_04745 0035c73c278bd1edd8a67adc2c8890ba 844 ProSitePatterns PS01151 Fimbrial biogenesis outer membrane usher protein signature. 299 309 - T 15-10-2018 IPR018030 Fimbrial membrane usher, conserved site AM378_04745 0035c73c278bd1edd8a67adc2c8890ba 844 Pfam PF13953 PapC C-terminal domain 765 830 4.2E-22 T 15-10-2018 IPR025949 PapC-like, C-terminal domain AM378_04745 0035c73c278bd1edd8a67adc2c8890ba 844 Gene3D G3DSA:2.60.40.3110 257 346 3.2E-35 T 15-10-2018 AM378_04745 0035c73c278bd1edd8a67adc2c8890ba 844 Gene3D G3DSA:2.60.40.2070 763 844 2.3E-19 T 15-10-2018 AM378_04745 0035c73c278bd1edd8a67adc2c8890ba 844 Pfam PF00577 Outer membrane usher protein 187 756 1.8E-141 T 15-10-2018 IPR000015 Outer membrane usher protein GO:0009297|GO:0015473|GO:0016020 AM378_13655 d415663a2cecf2f4af4b451c2862cc47 320 SUPERFAMILY SSF53474 85 257 2.15E-19 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold AM378_13655 d415663a2cecf2f4af4b451c2862cc47 320 Pfam PF11187 Protein of unknown function (DUF2974) 130 207 1.4E-4 T 15-10-2018 IPR024499 Protein of unknown function DUF2974 AM378_13655 d415663a2cecf2f4af4b451c2862cc47 320 Gene3D G3DSA:3.40.50.1820 118 223 6.5E-7 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold AM378_16380 4da881abd6ef17b44e1e2e39eaaba1b8 243 Pfam PF00117 Glutamine amidotransferase class-I 55 193 1.0E-17 T 15-10-2018 IPR017926 Glutamine amidotransferase AM378_16380 4da881abd6ef17b44e1e2e39eaaba1b8 243 Gene3D G3DSA:3.40.50.880 4 235 8.7E-49 T 15-10-2018 IPR029062 Class I glutamine amidotransferase-like AM378_16380 4da881abd6ef17b44e1e2e39eaaba1b8 243 SUPERFAMILY SSF52317 40 220 2.96E-37 T 15-10-2018 IPR029062 Class I glutamine amidotransferase-like AM378_07860 349ee1c14f00ed5d8feb4525b5d32872 688 Pfam PF02554 Carbon starvation protein CstA 32 408 2.0E-172 T 15-10-2018 IPR003706 CstA, N-terminal domain GO:0009267|GO:0016020 AM378_07860 349ee1c14f00ed5d8feb4525b5d32872 688 Pfam PF13722 5TM C-terminal transporter carbon starvation CstA 463 591 2.3E-32 T 15-10-2018 IPR025299 CstA, C-terminal domain AM378_05340 468b88e2a1faec3d0414266020cbd355 236 Pfam PF04352 ProQ/FINO family 8 115 2.5E-43 T 15-10-2018 IPR016103 ProQ/FinO domain AM378_05340 468b88e2a1faec3d0414266020cbd355 236 Gene3D G3DSA:1.10.1710.10 1 120 3.3E-25 T 15-10-2018 IPR036442 ProQ/FinO domain superfamily AM378_05340 468b88e2a1faec3d0414266020cbd355 236 SMART SM00945 5 119 3.8E-63 T 15-10-2018 IPR016103 ProQ/FinO domain AM378_05340 468b88e2a1faec3d0414266020cbd355 236 SUPERFAMILY SSF48657 5 119 3.01E-39 T 15-10-2018 IPR036442 ProQ/FinO domain superfamily AM378_05340 468b88e2a1faec3d0414266020cbd355 236 Hamap MF_00749 RNA chaperone ProQ [proQ]. 3 236 30.654 T 15-10-2018 IPR023529 RNA chaperone ProQ GO:0003723|GO:0010608|GO:0033592|GO:0034057 AM378_05340 468b88e2a1faec3d0414266020cbd355 236 Pfam PF17516 ProQ C-terminal domain 186 236 7.8E-25 T 15-10-2018 IPR035236 RNA chaperone ProQ, C-terminal AM378_16420 696ad6e2909398142b41e4f7407add18 226 Pfam PF09335 SNARE associated Golgi protein 48 172 4.4E-21 T 15-10-2018 IPR032816 SNARE associated Golgi protein AM378_12100 44f34bee60d64119ddacae18ddaab5ed 406 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 154 170 - T 15-10-2018 IPR018201 Beta-ketoacyl synthase, active site AM378_12100 44f34bee60d64119ddacae18ddaab5ed 406 Gene3D G3DSA:3.40.47.10 6 259 5.3E-67 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 AM378_12100 44f34bee60d64119ddacae18ddaab5ed 406 Gene3D G3DSA:3.40.47.10 260 405 8.1E-52 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 AM378_12100 44f34bee60d64119ddacae18ddaab5ed 406 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 254 361 4.0E-31 T 15-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal AM378_12100 44f34bee60d64119ddacae18ddaab5ed 406 SUPERFAMILY SSF53901 215 403 4.53E-63 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 AM378_12100 44f34bee60d64119ddacae18ddaab5ed 406 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 2 246 8.7E-40 T 15-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal AM378_12100 44f34bee60d64119ddacae18ddaab5ed 406 SUPERFAMILY SSF53901 1 253 7.78E-64 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 AM378_12100 44f34bee60d64119ddacae18ddaab5ed 406 SMART SM00825 Beta-ketoacyl synthase 4 406 6.9E-13 T 15-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain AM378_18935 426ef8f1a68a8cf1d1f09a4fc7f98855 366 Gene3D G3DSA:3.40.50.2000 1 193 3.8E-16 T 15-10-2018 AM378_18935 426ef8f1a68a8cf1d1f09a4fc7f98855 366 SUPERFAMILY SSF53756 2 363 6.98E-58 T 15-10-2018 AM378_18935 426ef8f1a68a8cf1d1f09a4fc7f98855 366 Pfam PF13439 Glycosyltransferase Family 4 13 184 3.7E-17 T 15-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 AM378_18935 426ef8f1a68a8cf1d1f09a4fc7f98855 366 Pfam PF00534 Glycosyl transferases group 1 198 341 7.8E-25 T 15-10-2018 IPR001296 Glycosyl transferase, family 1 AM378_18935 426ef8f1a68a8cf1d1f09a4fc7f98855 366 Gene3D G3DSA:3.40.50.2000 194 349 5.0E-30 T 15-10-2018 AM378_21520 f56e5d7cf3a78c96578347b974d11f1a 193 Gene3D G3DSA:3.40.50.11310 1 193 4.0E-60 T 15-10-2018 IPR038058 PhnH-like superfamily AM378_21520 f56e5d7cf3a78c96578347b974d11f1a 193 PIRSF PIRSF020680 1 193 8.6E-57 T 15-10-2018 IPR008772 Bacterial phosphonate metabolism, PhnH GO:0019634 AM378_21520 f56e5d7cf3a78c96578347b974d11f1a 193 Pfam PF05845 Bacterial phosphonate metabolism protein (PhnH) 5 191 1.3E-59 T 15-10-2018 IPR008772 Bacterial phosphonate metabolism, PhnH GO:0019634 AM378_21520 f56e5d7cf3a78c96578347b974d11f1a 193 TIGRFAM TIGR03292 PhnH_redo: phosphonate C-P lyase system protein PhnH 6 189 7.9E-52 T 15-10-2018 IPR008772 Bacterial phosphonate metabolism, PhnH GO:0019634 AM378_21520 f56e5d7cf3a78c96578347b974d11f1a 193 SUPERFAMILY SSF159709 13 192 4.45E-54 T 15-10-2018 IPR038058 PhnH-like superfamily AM378_17525 048aef97f8471e481532d1597f92e3c7 100 Gene3D G3DSA:3.30.70.330 1 100 3.1E-39 T 15-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily AM378_17525 048aef97f8471e481532d1597f92e3c7 100 Hamap MF_01369_B 50S ribosomal protein L23 [rplW]. 8 98 22.715 T 15-10-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 AM378_17525 048aef97f8471e481532d1597f92e3c7 100 Pfam PF00276 Ribosomal protein L23 9 95 3.7E-32 T 15-10-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 AM378_17525 048aef97f8471e481532d1597f92e3c7 100 ProSitePatterns PS00050 Ribosomal protein L23 signature. 81 96 - T 15-10-2018 IPR001014 Ribosomal protein L23/L25, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM378_17525 048aef97f8471e481532d1597f92e3c7 100 SUPERFAMILY SSF54189 6 97 3.96E-31 T 15-10-2018 IPR012678 Ribosomal protein L23/L15e core domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM378_22630 4452bc0a3089c5bd8b2aa44cdf698c0f 629 Pfam PF05787 Bacterial protein of unknown function (DUF839) 58 598 8.3E-188 T 15-10-2018 IPR008557 Protein of unknown function DUF839 AM378_22630 4452bc0a3089c5bd8b2aa44cdf698c0f 629 SUPERFAMILY SSF101898 293 592 9.15E-14 T 15-10-2018 AM378_22580 7d76c48d8dd3a4fe8f46c2c8f718b836 419 Pfam PF00201 UDP-glucoronosyl and UDP-glucosyl transferase 214 393 1.1E-6 T 15-10-2018 IPR002213 UDP-glucuronosyl/UDP-glucosyltransferase GO:0016758 Reactome: R-HSA-156588 AM378_22580 7d76c48d8dd3a4fe8f46c2c8f718b836 419 TIGRFAM TIGR01426 MGT: glycosyltransferase, MGT family 5 416 3.4E-35 T 15-10-2018 IPR006326 UDP-glycosyltransferase, MGT GO:0016758|GO:0016999 AM378_22580 7d76c48d8dd3a4fe8f46c2c8f718b836 419 Gene3D G3DSA:3.40.50.2000 1 247 1.1E-31 T 15-10-2018 AM378_22580 7d76c48d8dd3a4fe8f46c2c8f718b836 419 Gene3D G3DSA:3.40.50.2000 248 403 3.6E-39 T 15-10-2018 AM378_22580 7d76c48d8dd3a4fe8f46c2c8f718b836 419 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 2 58 1.5E-8 T 15-10-2018 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AM378_22580 7d76c48d8dd3a4fe8f46c2c8f718b836 419 SUPERFAMILY SSF53756 2 414 4.19E-64 T 15-10-2018 AM378_00740 6f3a971f517310869809e77f9eb7a4b7 224 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 13 118 1.1E-24 T 15-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 AM378_00740 6f3a971f517310869809e77f9eb7a4b7 224 SUPERFAMILY SSF161098 14 209 3.01E-39 T 15-10-2018 IPR035906 MetI-like superfamily AM378_00740 6f3a971f517310869809e77f9eb7a4b7 224 Gene3D G3DSA:1.10.3720.10 2 224 2.7E-50 T 15-10-2018 IPR035906 MetI-like superfamily AM378_00740 6f3a971f517310869809e77f9eb7a4b7 224 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 34 223 2.3E-18 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AM378_23785 0fa337da34d9b8ed98e2317c2cb681fd 378 Pfam PF02129 X-Pro dipeptidyl-peptidase (S15 family) 67 249 1.1E-4 T 15-10-2018 IPR000383 Xaa-Pro dipeptidyl-peptidase-like domain GO:0016787 AM378_23785 0fa337da34d9b8ed98e2317c2cb681fd 378 SUPERFAMILY SSF53474 15 378 1.5E-45 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold AM378_23785 0fa337da34d9b8ed98e2317c2cb681fd 378 Gene3D G3DSA:3.40.50.1820 61 359 1.6E-103 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold AM378_23785 0fa337da34d9b8ed98e2317c2cb681fd 378 Gene3D G3DSA:1.10.10.800 195 305 1.6E-103 T 15-10-2018 AM378_17990 f95684c454526c8cfb5ff1ceb661a2d5 218 Gene3D G3DSA:3.20.20.70 3 218 6.7E-83 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM378_17990 f95684c454526c8cfb5ff1ceb661a2d5 218 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 7 208 2.7E-26 T 15-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AM378_17990 f95684c454526c8cfb5ff1ceb661a2d5 218 SUPERFAMILY SSF51366 5 217 9.43E-40 T 15-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 AM378_17990 f95684c454526c8cfb5ff1ceb661a2d5 218 SMART SM00934 7 209 8.8E-36 T 15-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AM378_08505 f74834cbebe5d6b7cbef9704589cd9fe 397 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 3 373 6.2E-70 T 15-10-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0006855|GO:0015238|GO:0016021 AM378_08505 f74834cbebe5d6b7cbef9704589cd9fe 397 SUPERFAMILY SSF103473 4 379 4.97E-56 T 15-10-2018 IPR036259 MFS transporter superfamily AM378_08505 f74834cbebe5d6b7cbef9704589cd9fe 397 PRINTS PR01035 Tetracycline resistance protein signature 302 322 1.8E-7 T 15-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AM378_08505 f74834cbebe5d6b7cbef9704589cd9fe 397 PRINTS PR01035 Tetracycline resistance protein signature 44 63 1.8E-7 T 15-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AM378_08505 f74834cbebe5d6b7cbef9704589cd9fe 397 PRINTS PR01035 Tetracycline resistance protein signature 129 151 1.8E-7 T 15-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AM378_08505 f74834cbebe5d6b7cbef9704589cd9fe 397 PRINTS PR01035 Tetracycline resistance protein signature 14 30 1.8E-7 T 15-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AM378_08505 f74834cbebe5d6b7cbef9704589cd9fe 397 Pfam PF07690 Major Facilitator Superfamily 10 351 1.7E-41 T 15-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM378_08505 f74834cbebe5d6b7cbef9704589cd9fe 397 ProSitePatterns PS00216 Sugar transport proteins signature 1. 58 74 - T 15-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AM378_08505 f74834cbebe5d6b7cbef9704589cd9fe 397 Gene3D G3DSA:1.20.1720.10 4 383 3.5E-91 T 15-10-2018 AM378_23930 8326b47dc90d6c6dea7980f42940a508 127 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 2 125 3.6E-11 T 15-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AM378_23930 8326b47dc90d6c6dea7980f42940a508 127 SUPERFAMILY SSF54593 1 126 3.89E-23 T 15-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AM378_23930 8326b47dc90d6c6dea7980f42940a508 127 Gene3D G3DSA:3.10.180.10 1 126 5.9E-27 T 15-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AM378_12180 63d7589845ab7ad0a5c35f9725763288 155 Gene3D G3DSA:1.10.8.640 18 103 1.2E-37 T 15-10-2018 IPR038297 CcmH/CycL/Ccl2/NrfF domain superfamily AM378_12180 63d7589845ab7ad0a5c35f9725763288 155 Pfam PF03918 Cytochrome C biogenesis protein 7 147 1.0E-56 T 15-10-2018 IPR005616 CcmH/CycL/Ccl2/NrfF family AM378_22650 dd33b1ceb706f6ec769b7da58bda8c61 330 Gene3D G3DSA:3.40.718.10 1 330 3.1E-131 T 15-10-2018 AM378_22650 dd33b1ceb706f6ec769b7da58bda8c61 330 Hamap MF_00536 4-hydroxythreonine-4-phosphate dehydrogenase [pdxA]. 4 328 36.363 T 15-10-2018 IPR037510 4-hydroxythreonine-4-phosphate dehydrogenase GO:0042823|GO:0050570 KEGG: 00750+1.1.1.262 AM378_22650 dd33b1ceb706f6ec769b7da58bda8c61 330 TIGRFAM TIGR00557 pdxA: 4-hydroxythreonine-4-phosphate dehydrogenase PdxA 6 324 3.7E-130 T 15-10-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00750+1.1.1.262 AM378_22650 dd33b1ceb706f6ec769b7da58bda8c61 330 SUPERFAMILY SSF53659 5 327 4.32E-118 T 15-10-2018 AM378_22650 dd33b1ceb706f6ec769b7da58bda8c61 330 Pfam PF04166 Pyridoxal phosphate biosynthetic protein PdxA 34 321 6.3E-108 T 15-10-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00750+1.1.1.262 AM378_02815 f8f3e07a5ff5e3df8d30d9d98ebacb87 458 Pfam PF02321 Outer membrane efflux protein 31 227 4.9E-27 T 15-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 AM378_02815 f8f3e07a5ff5e3df8d30d9d98ebacb87 458 Pfam PF02321 Outer membrane efflux protein 254 436 1.6E-32 T 15-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 AM378_02815 f8f3e07a5ff5e3df8d30d9d98ebacb87 458 SUPERFAMILY SSF56954 30 454 9.55E-90 T 15-10-2018 AM378_02815 f8f3e07a5ff5e3df8d30d9d98ebacb87 458 Gene3D G3DSA:1.20.1600.10 29 457 1.9E-100 T 15-10-2018 AM378_02815 f8f3e07a5ff5e3df8d30d9d98ebacb87 458 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 29 455 2.8E-118 T 15-10-2018 IPR010130 Type I secretion outer membrane protein, TolC GO:0015562|GO:0019867|GO:0055085 AM378_13445 ca976d9c0abaeca5f8b623d7636c6973 394 PIRSF PIRSF000018 6 394 1.1E-137 T 15-10-2018 IPR014353 Membrane-bound alcohol dehydrogenase, cytochrome c subunit GO:0005506|GO:0016020|GO:0016614|GO:0020037 AM378_13445 ca976d9c0abaeca5f8b623d7636c6973 394 Gene3D G3DSA:1.10.760.10 6 128 1.5E-9 T 15-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM378_13445 ca976d9c0abaeca5f8b623d7636c6973 394 SUPERFAMILY SSF46626 274 385 3.3E-19 T 15-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM378_13445 ca976d9c0abaeca5f8b623d7636c6973 394 SUPERFAMILY SSF46626 18 144 1.39E-19 T 15-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM378_13445 ca976d9c0abaeca5f8b623d7636c6973 394 SUPERFAMILY SSF46626 168 275 2.2E-16 T 15-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM378_13445 ca976d9c0abaeca5f8b623d7636c6973 394 Gene3D G3DSA:1.10.760.10 270 394 1.2E-28 T 15-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM378_13445 ca976d9c0abaeca5f8b623d7636c6973 394 Gene3D G3DSA:1.10.760.10 157 269 2.4E-10 T 15-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM378_13445 ca976d9c0abaeca5f8b623d7636c6973 394 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 20 118 5.6E-5 T 15-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM378_13445 ca976d9c0abaeca5f8b623d7636c6973 394 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 289 369 6.8E-9 T 15-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM378_20805 55eac4eee3810e873441a417b60131b6 967 Gene3D G3DSA:3.30.559.10 26 219 1.1E-16 T 15-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 AM378_20805 55eac4eee3810e873441a417b60131b6 967 Gene3D G3DSA:3.30.559.30 696 951 1.1E-76 T 15-10-2018 AM378_20805 55eac4eee3810e873441a417b60131b6 967 Pfam PF00550 Phosphopantetheine attachment site 440 493 3.8E-8 T 15-10-2018 IPR009081 Phosphopantetheine binding ACP domain AM378_20805 55eac4eee3810e873441a417b60131b6 967 SUPERFAMILY SSF52777 700 953 5.0E-36 T 15-10-2018 AM378_20805 55eac4eee3810e873441a417b60131b6 967 SMART SM00823 Phosphopantetheine attachment site 428 498 0.0043 T 15-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 AM378_20805 55eac4eee3810e873441a417b60131b6 967 Pfam PF00668 Condensation domain 516 955 1.3E-52 T 15-10-2018 IPR001242 Condensation domain AM378_20805 55eac4eee3810e873441a417b60131b6 967 SUPERFAMILY SSF52777 519 695 5.56E-36 T 15-10-2018 AM378_20805 55eac4eee3810e873441a417b60131b6 967 SUPERFAMILY SSF47336 430 493 4.58E-11 T 15-10-2018 IPR036736 ACP-like superfamily AM378_20805 55eac4eee3810e873441a417b60131b6 967 Gene3D G3DSA:1.10.1200.10 411 500 1.1E-12 T 15-10-2018 IPR036736 ACP-like superfamily AM378_20805 55eac4eee3810e873441a417b60131b6 967 SUPERFAMILY SSF52777 36 187 4.22E-15 T 15-10-2018 AM378_20805 55eac4eee3810e873441a417b60131b6 967 Gene3D G3DSA:3.30.559.10 518 896 1.1E-76 T 15-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 AM378_11685 6646a1a78083df00d627dd6e46570379 327 SUPERFAMILY SSF54826 6 103 3.96E-28 T 15-10-2018 AM378_11685 6646a1a78083df00d627dd6e46570379 327 TIGRFAM TIGR01927 menC_gamma/gm+: o-succinylbenzoate synthase 11 311 1.1E-114 T 15-10-2018 AM378_11685 6646a1a78083df00d627dd6e46570379 327 Hamap MF_00470 o-succinylbenzoate synthase [menC]. 8 325 23.114 T 15-10-2018 IPR010196 o-Succinylbenzoate synthase, MenC type1 GO:0000287|GO:0009234|GO:0016836 KEGG: 00130+4.2.1.113|MetaCyc: PWY-5837 AM378_11685 6646a1a78083df00d627dd6e46570379 327 Gene3D G3DSA:3.30.390.10 8 306 2.5E-126 T 15-10-2018 IPR029017 Enolase-like, N-terminal AM378_11685 6646a1a78083df00d627dd6e46570379 327 SUPERFAMILY SSF51604 112 310 5.9E-50 T 15-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily AM378_11685 6646a1a78083df00d627dd6e46570379 327 SMART SM00922 119 214 6.7E-9 T 15-10-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal AM378_11685 6646a1a78083df00d627dd6e46570379 327 Pfam PF13378 Enolase C-terminal domain-like 131 276 3.0E-15 T 15-10-2018 IPR029065 Enolase C-terminal domain-like AM378_11685 6646a1a78083df00d627dd6e46570379 327 Gene3D G3DSA:3.20.20.120 102 299 2.5E-126 T 15-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily AM378_21660 41f993b16f36c8b547614ca0e27a1022 149 Gene3D G3DSA:3.40.50.10110 1 146 8.2E-50 T 15-10-2018 IPR036768 DNA polymerase III subunit chi superfamily AM378_21660 41f993b16f36c8b547614ca0e27a1022 149 Pfam PF04364 DNA polymerase III chi subunit, HolC 1 142 7.3E-39 T 15-10-2018 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 AM378_21660 41f993b16f36c8b547614ca0e27a1022 149 SUPERFAMILY SSF102400 1 143 4.45E-46 T 15-10-2018 IPR036768 DNA polymerase III subunit chi superfamily AM378_15990 14d4c3a416d5f711bac258805c283a4a 366 Gene3D G3DSA:3.40.50.1970 2 159 2.6E-42 T 15-10-2018 AM378_15990 14d4c3a416d5f711bac258805c283a4a 366 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 241 261 - T 15-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 AM378_15990 14d4c3a416d5f711bac258805c283a4a 366 SUPERFAMILY SSF56796 2 356 1.19E-88 T 15-10-2018 AM378_15990 14d4c3a416d5f711bac258805c283a4a 366 Gene3D G3DSA:1.20.1090.10 160 366 2.6E-79 T 15-10-2018 AM378_15990 14d4c3a416d5f711bac258805c283a4a 366 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 150 178 - T 15-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 AM378_15990 14d4c3a416d5f711bac258805c283a4a 366 Pfam PF00465 Iron-containing alcohol dehydrogenase 8 346 1.9E-64 T 15-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 AM378_15990 14d4c3a416d5f711bac258805c283a4a 366 PIRSF PIRSF000112 1 360 2.1E-91 T 15-10-2018 IPR016205 Glycerol dehydrogenase GO:0016614|GO:0046872|GO:0055114 KEGG: 00564+1.1.1.261|MetaCyc: PWY-6349 AM378_11625 5dd79d64de4b8a14e39698ce63da0f50 241 TIGRFAM TIGR01983 UbiG: 3-demethylubiquinone-9 3-O-methyltransferase 16 234 2.7E-89 T 15-10-2018 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|Reactome: R-HSA-2142789 AM378_11625 5dd79d64de4b8a14e39698ce63da0f50 241 Pfam PF13489 Methyltransferase domain 58 197 3.8E-25 T 15-10-2018 AM378_11625 5dd79d64de4b8a14e39698ce63da0f50 241 Hamap MF_00472 Ubiquinone biosynthesis O-methyltransferase [ubiG]. 16 240 37.003 T 15-10-2018 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|Reactome: R-HSA-2142789 AM378_11625 5dd79d64de4b8a14e39698ce63da0f50 241 SUPERFAMILY SSF53335 18 229 2.55E-45 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM378_11625 5dd79d64de4b8a14e39698ce63da0f50 241 Gene3D G3DSA:3.40.50.150 16 240 7.1E-76 T 15-10-2018 AM378_08100 70ceb1be55cc795c765e00f9e7791cf8 332 Gene3D G3DSA:3.40.1030.10 67 321 3.9E-123 T 15-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 AM378_08100 70ceb1be55cc795c765e00f9e7791cf8 332 Gene3D G3DSA:1.20.970.10 11 183 3.9E-123 T 15-10-2018 AM378_08100 70ceb1be55cc795c765e00f9e7791cf8 332 SUPERFAMILY SSF47648 1 67 1.57E-16 T 15-10-2018 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 AM378_08100 70ceb1be55cc795c765e00f9e7791cf8 332 Pfam PF02885 Glycosyl transferase family, helical bundle domain 3 62 1.0E-14 T 15-10-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 AM378_08100 70ceb1be55cc795c765e00f9e7791cf8 332 TIGRFAM TIGR01245 trpD: anthranilate phosphoribosyltransferase 5 328 7.2E-127 T 15-10-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 AM378_08100 70ceb1be55cc795c765e00f9e7791cf8 332 Hamap MF_00211 Anthranilate phosphoribosyltransferase [trpD]. 3 331 39.367 T 15-10-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 AM378_08100 70ceb1be55cc795c765e00f9e7791cf8 332 Pfam PF00591 Glycosyl transferase family, a/b domain 73 322 5.4E-100 T 15-10-2018 IPR000312 Glycosyl transferase, family 3 GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 AM378_08100 70ceb1be55cc795c765e00f9e7791cf8 332 SUPERFAMILY SSF52418 70 327 4.45E-94 T 15-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 AM378_09830 1c9e22afcf4a49e4bca765904de4a8de 119 Hamap MF_00725 Flagellar transcriptional regulator FlhD [flhD]. 4 107 28.815 T 15-10-2018 IPR023559 Flagellar transcriptional activator FlhD GO:0044780|GO:0045893 AM378_09830 1c9e22afcf4a49e4bca765904de4a8de 119 Gene3D G3DSA:1.10.4000.10 4 119 2.1E-49 T 15-10-2018 IPR036194 Flagellar transcriptional activator FlhD superfamily AM378_09830 1c9e22afcf4a49e4bca765904de4a8de 119 Pfam PF05247 Flagellar transcriptional activator (FlhD) 4 103 5.3E-40 T 15-10-2018 IPR023559 Flagellar transcriptional activator FlhD GO:0044780|GO:0045893 AM378_09830 1c9e22afcf4a49e4bca765904de4a8de 119 ProDom PD015582 ACTIVATOR TRANSCRIPTIONAL TRANSCRIPTION FLAGELLUM FLHD FLAGELLAR DNA-BINDING REGULATION REGULATOR PROBABLE 12 97 8.0E-45 T 15-10-2018 IPR023559 Flagellar transcriptional activator FlhD GO:0044780|GO:0045893 AM378_09830 1c9e22afcf4a49e4bca765904de4a8de 119 SUPERFAMILY SSF63592 4 101 1.57E-38 T 15-10-2018 IPR036194 Flagellar transcriptional activator FlhD superfamily AM378_15820 cfff2ec10efc29acd888a3eb381e5050 456 Pfam PF00367 phosphotransferase system, EIIB 10 41 1.9E-14 T 15-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 AM378_15820 cfff2ec10efc29acd888a3eb381e5050 456 Pfam PF02378 Phosphotransferase system, EIIC 110 395 8.2E-46 T 15-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 AM378_15820 cfff2ec10efc29acd888a3eb381e5050 456 SUPERFAMILY SSF55604 7 80 1.57E-20 T 15-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 AM378_15820 cfff2ec10efc29acd888a3eb381e5050 456 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 28 111 3.1E-22 T 15-10-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 AM378_15820 cfff2ec10efc29acd888a3eb381e5050 456 TIGRFAM TIGR00852 pts-Glc: PTS system, maltose and glucose-specific subfamily, IIC component 153 437 9.0E-89 T 15-10-2018 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component GO:0008982|GO:0009401|GO:0016021 AM378_15820 cfff2ec10efc29acd888a3eb381e5050 456 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 19 36 - T 15-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 AM378_15820 cfff2ec10efc29acd888a3eb381e5050 456 TIGRFAM TIGR01996 PTS-II-BC-sucr: PTS system, sucrose-specific IIBC component 5 448 3.0E-191 T 15-10-2018 IPR010973 Phosphotransferase system, sucrose-specific IIBC component GO:0008982|GO:0009401|GO:0016021 AM378_15820 cfff2ec10efc29acd888a3eb381e5050 456 Gene3D G3DSA:3.30.1360.60 1 77 1.1E-24 T 15-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 AM378_19710 a3b2041b5a00140a7a08a5346b5403b9 307 Gene3D G3DSA:3.40.50.880 2 201 7.2E-46 T 15-10-2018 IPR029062 Class I glutamine amidotransferase-like AM378_19710 a3b2041b5a00140a7a08a5346b5403b9 307 SUPERFAMILY SSF52317 5 195 4.2E-32 T 15-10-2018 IPR029062 Class I glutamine amidotransferase-like AM378_19710 a3b2041b5a00140a7a08a5346b5403b9 307 SMART SM00342 230 304 1.3E-7 T 15-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM378_19710 a3b2041b5a00140a7a08a5346b5403b9 307 Pfam PF12833 Helix-turn-helix domain 236 300 3.4E-12 T 15-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM378_19710 a3b2041b5a00140a7a08a5346b5403b9 307 Gene3D G3DSA:1.10.10.60 212 305 1.7E-16 T 15-10-2018 AM378_19710 a3b2041b5a00140a7a08a5346b5403b9 307 Pfam PF01965 DJ-1/PfpI family 5 174 4.8E-13 T 15-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 AM378_19710 a3b2041b5a00140a7a08a5346b5403b9 307 SUPERFAMILY SSF46689 213 263 4.45E-9 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AM378_04400 988017a42796a309503cc5747303325a 434 Pfam PF01566 Natural resistance-associated macrophage protein 52 400 7.5E-124 T 15-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 AM378_04400 988017a42796a309503cc5747303325a 434 Hamap MF_00221 Divalent metal cation transporter MntH [mntH]. 21 426 35.712 T 15-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 AM378_04400 988017a42796a309503cc5747303325a 434 PRINTS PR00447 Natural resistance-associated macrophage protein signature 139 158 4.9E-35 T 15-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 AM378_04400 988017a42796a309503cc5747303325a 434 PRINTS PR00447 Natural resistance-associated macrophage protein signature 214 237 4.9E-35 T 15-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 AM378_04400 988017a42796a309503cc5747303325a 434 PRINTS PR00447 Natural resistance-associated macrophage protein signature 111 137 4.9E-35 T 15-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 AM378_04400 988017a42796a309503cc5747303325a 434 PRINTS PR00447 Natural resistance-associated macrophage protein signature 316 335 4.9E-35 T 15-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 AM378_04400 988017a42796a309503cc5747303325a 434 PRINTS PR00447 Natural resistance-associated macrophage protein signature 164 185 4.9E-35 T 15-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 AM378_04400 988017a42796a309503cc5747303325a 434 TIGRFAM TIGR01197 nramp: metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 34 394 3.8E-98 T 15-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 AM378_10350 cf20baf69df31a1785e24eb93afb0e21 263 Gene3D G3DSA:1.10.12.10 206 263 8.5E-24 T 15-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal AM378_10350 cf20baf69df31a1785e24eb93afb0e21 263 Pfam PF00378 Enoyl-CoA hydratase/isomerase 11 262 2.6E-67 T 15-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 AM378_10350 cf20baf69df31a1785e24eb93afb0e21 263 TIGRFAM TIGR02280 PaaB1: phenylacetate degradation probable enoyl-CoA hydratase PaaB 6 263 3.5E-132 T 15-10-2018 IPR011968 Phenylacetate degradation probable enoyl-CoA hydratase PaaB GO:0010124 KEGG: 00360+5.3.3.18 AM378_10350 cf20baf69df31a1785e24eb93afb0e21 263 Gene3D G3DSA:3.90.226.10 1 205 1.2E-80 T 15-10-2018 AM378_10350 cf20baf69df31a1785e24eb93afb0e21 263 SUPERFAMILY SSF52096 2 262 1.28E-86 T 15-10-2018 IPR029045 ClpP/crotonase-like domain superfamily AM378_08710 ea9ed60aa66a88608c6a2392673269d5 192 Pfam PF00857 Isochorismatase family 9 183 3.3E-38 T 15-10-2018 IPR000868 Isochorismatase-like GO:0003824 AM378_08710 ea9ed60aa66a88608c6a2392673269d5 192 SUPERFAMILY SSF52499 4 191 2.62E-49 T 15-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 AM378_08710 ea9ed60aa66a88608c6a2392673269d5 192 Gene3D G3DSA:3.40.50.850 1 190 8.7E-53 T 15-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 AM378_19340 1bc60126fff07a288a8182a2408796ff 258 ProSitePatterns PS00211 ABC transporters family signature. 155 169 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM378_19340 1bc60126fff07a288a8182a2408796ff 258 Pfam PF00005 ABC transporter 27 182 4.2E-34 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM378_19340 1bc60126fff07a288a8182a2408796ff 258 SUPERFAMILY SSF52540 12 245 1.01E-59 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_19340 1bc60126fff07a288a8182a2408796ff 258 Gene3D G3DSA:3.40.50.300 10 256 6.5E-66 T 15-10-2018 AM378_19340 1bc60126fff07a288a8182a2408796ff 258 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 12 258 2.6E-120 T 15-10-2018 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 AM378_19340 1bc60126fff07a288a8182a2408796ff 258 SMART SM00382 36 238 3.0E-10 T 15-10-2018 IPR003593 AAA+ ATPase domain AM378_13415 308ff379365f7c5245d91d72e8321a1a 340 Pfam PF03824 High-affinity nickel-transport protein 75 326 3.5E-39 T 15-10-2018 IPR011541 Nickel/cobalt transporter, high-affinity GO:0015099|GO:0016021|GO:0035444|GO:0046872 AM378_06360 9621867498eec97b59102ca6acf9ba07 301 Pfam PF03466 LysR substrate binding domain 90 293 2.0E-35 T 15-10-2018 IPR005119 LysR, substrate-binding AM378_06360 9621867498eec97b59102ca6acf9ba07 301 SUPERFAMILY SSF46785 2 113 7.62E-25 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM378_06360 9621867498eec97b59102ca6acf9ba07 301 Gene3D G3DSA:1.10.10.10 4 89 8.7E-20 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_06360 9621867498eec97b59102ca6acf9ba07 301 Gene3D G3DSA:3.40.190.290 92 298 3.6E-36 T 15-10-2018 AM378_06360 9621867498eec97b59102ca6acf9ba07 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 64 2.6E-16 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_06360 9621867498eec97b59102ca6acf9ba07 301 SUPERFAMILY SSF53850 91 294 4.05E-36 T 15-10-2018 AM378_03830 56c0dc7316e9dec397acc5f634a1860c 356 SUPERFAMILY SSF49401 204 356 3.48E-13 T 15-10-2018 IPR008966 Adhesion domain superfamily AM378_03830 56c0dc7316e9dec397acc5f634a1860c 356 Gene3D G3DSA:2.60.40.1090 202 355 9.9E-13 T 15-10-2018 IPR036937 Fimbrial-type adhesion domain superfamily GO:0007155|GO:0009289 AM378_03830 56c0dc7316e9dec397acc5f634a1860c 356 Pfam PF00419 Fimbrial protein 197 355 4.8E-14 T 15-10-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM378_09395 7bc0f9c23bf976112b7f4cf38c97a3ba 168 Pfam PF05926 Phage head completion protein (GPL) 30 168 8.3E-46 T 15-10-2018 IPR009225 Bacteriophage head completion protein GpL GO:0019069 AM378_05275 728568007ca8fa2e3eeeb11345abbf20 130 SUPERFAMILY SSF88697 3 128 1.32E-41 T 15-10-2018 IPR015947 PUA-like superfamily AM378_05275 728568007ca8fa2e3eeeb11345abbf20 130 SMART SM01022 15 128 3.9E-38 T 15-10-2018 IPR007374 ASCH domain AM378_05275 728568007ca8fa2e3eeeb11345abbf20 130 PIRSF PIRSF021320 1 130 1.2E-39 T 15-10-2018 IPR009326 Protein of unknown function DUF984 AM378_05275 728568007ca8fa2e3eeeb11345abbf20 130 Gene3D G3DSA:3.10.400.10 2 130 7.6E-42 T 15-10-2018 AM378_05275 728568007ca8fa2e3eeeb11345abbf20 130 Pfam PF04266 ASCH domain 26 127 6.3E-21 T 15-10-2018 IPR007374 ASCH domain AM378_23045 1d06b7de9f14d759c2697a03d70c14dc 563 Pfam PF17392 Urocanase C-terminal domain 352 546 1.8E-93 T 15-10-2018 IPR035401 Urocanase, C-terminal domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 AM378_23045 1d06b7de9f14d759c2697a03d70c14dc 563 Gene3D G3DSA:3.40.1770.10 17 542 2.4E-266 T 15-10-2018 AM378_23045 1d06b7de9f14d759c2697a03d70c14dc 563 SUPERFAMILY SSF111326 8 555 2.75E-265 T 15-10-2018 IPR036190 Urocanase superfamily KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 AM378_23045 1d06b7de9f14d759c2697a03d70c14dc 563 Pfam PF01175 Urocanase Rossmann-like domain 141 349 1.9E-88 T 15-10-2018 IPR035085 Urocanase, Rossmann-like domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 AM378_23045 1d06b7de9f14d759c2697a03d70c14dc 563 ProSitePatterns PS01233 Urocanase signature. 442 457 - T 15-10-2018 IPR023636 Urocanase conserved site GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 AM378_23045 1d06b7de9f14d759c2697a03d70c14dc 563 PIRSF PIRSF001423 2 561 8.7E-299 T 15-10-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 AM378_23045 1d06b7de9f14d759c2697a03d70c14dc 563 Gene3D G3DSA:3.40.50.10730 142 349 2.4E-266 T 15-10-2018 IPR038364 Urocanase, central domain superfamily KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 AM378_23045 1d06b7de9f14d759c2697a03d70c14dc 563 TIGRFAM TIGR01228 hutU: urocanate hydratase 11 554 0.0 T 15-10-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 AM378_23045 1d06b7de9f14d759c2697a03d70c14dc 563 Pfam PF17391 Urocanase N-terminal domain 12 138 6.4E-63 T 15-10-2018 IPR035400 Urocanase, N-terminal domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 AM378_23045 1d06b7de9f14d759c2697a03d70c14dc 563 Hamap MF_00577 Urocanate hydratase [hutU]. 3 556 50.735 T 15-10-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 AM378_12455 a5a882c32d96068cb36e9f7e899c4989 471 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 2 305 1.2E-116 T 15-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 AM378_12455 a5a882c32d96068cb36e9f7e899c4989 471 SUPERFAMILY SSF52374 3 298 1.21E-112 T 15-10-2018 AM378_12455 a5a882c32d96068cb36e9f7e899c4989 471 Gene3D G3DSA:1.10.10.350 366 469 6.5E-23 T 15-10-2018 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 AM378_12455 a5a882c32d96068cb36e9f7e899c4989 471 Hamap MF_00022 Glutamate--tRNA ligase [gltX]. 2 461 32.941 T 15-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 AM378_12455 a5a882c32d96068cb36e9f7e899c4989 471 Gene3D G3DSA:3.40.50.620 1 314 4.9E-136 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM378_12455 a5a882c32d96068cb36e9f7e899c4989 471 SUPERFAMILY SSF48163 299 461 2.62E-45 T 15-10-2018 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 AM378_12455 a5a882c32d96068cb36e9f7e899c4989 471 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 2 459 6.8E-202 T 15-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 AM378_12455 a5a882c32d96068cb36e9f7e899c4989 471 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 9 20 - T 15-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM378_12455 a5a882c32d96068cb36e9f7e899c4989 471 PRINTS PR00987 Glutamyl-tRNA synthetase signature 179 189 3.1E-27 T 15-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 AM378_12455 a5a882c32d96068cb36e9f7e899c4989 471 PRINTS PR00987 Glutamyl-tRNA synthetase signature 20 31 3.1E-27 T 15-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 AM378_12455 a5a882c32d96068cb36e9f7e899c4989 471 PRINTS PR00987 Glutamyl-tRNA synthetase signature 6 18 3.1E-27 T 15-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 AM378_12455 a5a882c32d96068cb36e9f7e899c4989 471 PRINTS PR00987 Glutamyl-tRNA synthetase signature 195 203 3.1E-27 T 15-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 AM378_12455 a5a882c32d96068cb36e9f7e899c4989 471 PRINTS PR00987 Glutamyl-tRNA synthetase signature 35 48 3.1E-27 T 15-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 AM378_22775 26509b2abdea994a1edace38aebbc544 572 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 4 567 8.3E-279 T 15-10-2018 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 AM378_22775 26509b2abdea994a1edace38aebbc544 572 SUPERFAMILY SSF52467 188 362 7.2E-62 T 15-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily AM378_22775 26509b2abdea994a1edace38aebbc544 572 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 5 170 8.1E-60 T 15-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 AM378_22775 26509b2abdea994a1edace38aebbc544 572 Gene3D G3DSA:3.40.50.970 1 180 4.4E-72 T 15-10-2018 AM378_22775 26509b2abdea994a1edace38aebbc544 572 SUPERFAMILY SSF52518 371 566 7.56E-70 T 15-10-2018 IPR029061 Thiamin diphosphate-binding fold AM378_22775 26509b2abdea994a1edace38aebbc544 572 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 431 450 - T 15-10-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 AM378_22775 26509b2abdea994a1edace38aebbc544 572 Gene3D G3DSA:3.40.50.970 365 564 1.4E-68 T 15-10-2018 AM378_22775 26509b2abdea994a1edace38aebbc544 572 Gene3D G3DSA:3.40.50.1220 190 360 4.2E-62 T 15-10-2018 AM378_22775 26509b2abdea994a1edace38aebbc544 572 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 196 330 3.8E-46 T 15-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 AM378_22775 26509b2abdea994a1edace38aebbc544 572 SUPERFAMILY SSF52518 2 181 1.61E-66 T 15-10-2018 IPR029061 Thiamin diphosphate-binding fold AM378_22775 26509b2abdea994a1edace38aebbc544 572 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 394 543 1.5E-51 T 15-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 AM378_02450 bc48bae4c4c085bbd8d0c642128acb53 864 Gene3D G3DSA:2.60.40.3110 264 353 9.3E-38 T 15-10-2018 AM378_02450 bc48bae4c4c085bbd8d0c642128acb53 864 Gene3D G3DSA:2.60.40.2610 686 776 6.1E-27 T 15-10-2018 AM378_02450 bc48bae4c4c085bbd8d0c642128acb53 864 Pfam PF13953 PapC C-terminal domain 781 840 1.8E-10 T 15-10-2018 IPR025949 PapC-like, C-terminal domain AM378_02450 bc48bae4c4c085bbd8d0c642128acb53 864 Pfam PF13954 PapC N-terminal domain 38 177 1.1E-36 T 15-10-2018 IPR025885 PapC, N-terminal domain GO:0005515 AM378_02450 bc48bae4c4c085bbd8d0c642128acb53 864 SUPERFAMILY SSF141729 59 168 4.32E-26 T 15-10-2018 IPR037224 PapC, N-terminal domain superfamily GO:0005515 AM378_02450 bc48bae4c4c085bbd8d0c642128acb53 864 Gene3D G3DSA:2.60.40.2070 781 863 7.0E-14 T 15-10-2018 AM378_02450 bc48bae4c4c085bbd8d0c642128acb53 864 Gene3D G3DSA:3.10.20.410 37 153 2.2E-24 T 15-10-2018 AM378_02450 bc48bae4c4c085bbd8d0c642128acb53 864 Pfam PF00577 Outer membrane usher protein 195 771 2.9E-181 T 15-10-2018 IPR000015 Outer membrane usher protein GO:0009297|GO:0015473|GO:0016020 AM378_00115 f16a1610a3183bb1bf73314a9a913990 403 TIGRFAM TIGR02120 GspF: type II secretion system protein F 3 402 6.3E-149 T 15-10-2018 IPR011850 General secretion pathway protein F GO:0008565|GO:0015627|GO:0015628 AM378_00115 f16a1610a3183bb1bf73314a9a913990 403 ProSitePatterns PS00874 Bacterial type II secretion system protein F signature. 164 192 - T 15-10-2018 IPR001992 Type II secretion system conserved site GO:0009306|GO:0016020 AM378_00115 f16a1610a3183bb1bf73314a9a913990 403 Pfam PF00482 Type II secretion system (T2SS), protein F 70 192 7.0E-31 T 15-10-2018 IPR018076 Type II secretion system F domain AM378_00115 f16a1610a3183bb1bf73314a9a913990 403 Pfam PF00482 Type II secretion system (T2SS), protein F 274 393 9.2E-21 T 15-10-2018 IPR018076 Type II secretion system F domain AM378_00115 f16a1610a3183bb1bf73314a9a913990 403 PRINTS PR00812 Bacterial general secretion pathway protein F signature 367 381 1.8E-40 T 15-10-2018 IPR003004 GspF/PilC family AM378_00115 f16a1610a3183bb1bf73314a9a913990 403 PRINTS PR00812 Bacterial general secretion pathway protein F signature 383 402 1.8E-40 T 15-10-2018 IPR003004 GspF/PilC family AM378_00115 f16a1610a3183bb1bf73314a9a913990 403 PRINTS PR00812 Bacterial general secretion pathway protein F signature 65 77 1.8E-40 T 15-10-2018 IPR003004 GspF/PilC family AM378_00115 f16a1610a3183bb1bf73314a9a913990 403 PRINTS PR00812 Bacterial general secretion pathway protein F signature 164 192 1.8E-40 T 15-10-2018 IPR003004 GspF/PilC family AM378_00115 f16a1610a3183bb1bf73314a9a913990 403 Gene3D G3DSA:1.20.81.30 255 366 2.6E-21 T 15-10-2018 AM378_00115 f16a1610a3183bb1bf73314a9a913990 403 Gene3D G3DSA:1.20.81.30 57 171 3.4E-32 T 15-10-2018 AM378_23350 c3041b5b5ea6cedeee252a3a979c3f18 358 Pfam PF00793 DAHP synthetase I family 42 340 1.6E-106 T 15-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 AM378_23350 c3041b5b5ea6cedeee252a3a979c3f18 358 SUPERFAMILY SSF51569 8 346 4.3E-138 T 15-10-2018 AM378_23350 c3041b5b5ea6cedeee252a3a979c3f18 358 Gene3D G3DSA:3.20.20.70 3 350 1.7E-157 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM378_23350 c3041b5b5ea6cedeee252a3a979c3f18 358 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 8 347 1.5E-167 T 15-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 AM378_23350 c3041b5b5ea6cedeee252a3a979c3f18 358 PIRSF PIRSF001361 1 354 3.6E-163 T 15-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 AM378_16360 c4b776d2b7650bf873c0da47923d6438 673 Gene3D G3DSA:3.20.20.70 3 370 2.5E-123 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM378_16360 c4b776d2b7650bf873c0da47923d6438 673 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 498 516 8.2E-11 T 15-10-2018 AM378_16360 c4b776d2b7650bf873c0da47923d6438 673 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 378 397 8.2E-11 T 15-10-2018 AM378_16360 c4b776d2b7650bf873c0da47923d6438 673 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 619 635 8.2E-11 T 15-10-2018 AM378_16360 c4b776d2b7650bf873c0da47923d6438 673 SUPERFAMILY SSF51905 461 651 3.42E-23 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AM378_16360 c4b776d2b7650bf873c0da47923d6438 673 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 620 634 2.6E-5 T 15-10-2018 AM378_16360 c4b776d2b7650bf873c0da47923d6438 673 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 377 399 2.6E-5 T 15-10-2018 AM378_16360 c4b776d2b7650bf873c0da47923d6438 673 SUPERFAMILY SSF51971 334 520 7.06E-43 T 15-10-2018 AM378_16360 c4b776d2b7650bf873c0da47923d6438 673 Gene3D G3DSA:3.50.50.60 470 626 1.6E-121 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AM378_16360 c4b776d2b7650bf873c0da47923d6438 673 Gene3D G3DSA:3.40.50.720 376 667 1.6E-121 T 15-10-2018 AM378_16360 c4b776d2b7650bf873c0da47923d6438 673 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 7 332 6.0E-89 T 15-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 AM378_16360 c4b776d2b7650bf873c0da47923d6438 673 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 377 644 1.0E-25 T 15-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM378_16360 c4b776d2b7650bf873c0da47923d6438 673 SUPERFAMILY SSF51395 3 363 1.28E-109 T 15-10-2018 AM378_05780 26f5850b8f7335dbdfde0a24e63bbf5f 403 Gene3D G3DSA:1.20.1720.10 7 382 1.3E-79 T 15-10-2018 AM378_05780 26f5850b8f7335dbdfde0a24e63bbf5f 403 Pfam PF07690 Major Facilitator Superfamily 14 343 1.3E-39 T 15-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM378_05780 26f5850b8f7335dbdfde0a24e63bbf5f 403 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 4 382 6.9E-109 T 15-10-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0006855|GO:0015238|GO:0016021 AM378_05780 26f5850b8f7335dbdfde0a24e63bbf5f 403 SUPERFAMILY SSF103473 6 384 1.57E-60 T 15-10-2018 IPR036259 MFS transporter superfamily AM378_20100 c92e8f7805694b6b7550d4e26a82cf96 246 Gene3D G3DSA:3.40.50.10090 4 245 6.9E-69 T 15-10-2018 AM378_20100 c92e8f7805694b6b7550d4e26a82cf96 246 Gene3D G3DSA:3.40.50.10090 32 165 6.9E-69 T 15-10-2018 AM378_20100 c92e8f7805694b6b7550d4e26a82cf96 246 Pfam PF02602 Uroporphyrinogen-III synthase HemD 14 242 3.5E-41 T 15-10-2018 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AM378_20100 c92e8f7805694b6b7550d4e26a82cf96 246 SUPERFAMILY SSF69618 1 245 3.92E-55 T 15-10-2018 IPR036108 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase superfamily GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AM378_15475 f6459de337ccfbdb2b95bbb1b7aab7f6 264 Pfam PF02675 S-adenosylmethionine decarboxylase 33 169 5.1E-29 T 15-10-2018 IPR003826 S-adenosylmethionine decarboxylase family, prokaryotic GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 AM378_15475 f6459de337ccfbdb2b95bbb1b7aab7f6 264 SUPERFAMILY SSF56276 43 174 7.06E-23 T 15-10-2018 IPR016067 S-adenosylmethionine decarboxylase, core GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|Reactome: R-HSA-351202 AM378_15475 f6459de337ccfbdb2b95bbb1b7aab7f6 264 PIRSF PIRSF001356 1 263 2.8E-156 T 15-10-2018 IPR009165 S-adenosylmethionine decarboxylase, bacterial GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 AM378_15475 f6459de337ccfbdb2b95bbb1b7aab7f6 264 Gene3D G3DSA:3.60.90.10 93 184 1.6E-6 T 15-10-2018 AM378_15475 f6459de337ccfbdb2b95bbb1b7aab7f6 264 Hamap MF_00465 S-adenosylmethionine decarboxylase proenzyme [speD]. 1 264 177.323 T 15-10-2018 IPR009165 S-adenosylmethionine decarboxylase, bacterial GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 AM378_15475 f6459de337ccfbdb2b95bbb1b7aab7f6 264 TIGRFAM TIGR03331 SAM_DCase_Eco: S-adenosylmethionine decarboxylase proenzyme 3 261 4.0E-148 T 15-10-2018 IPR009165 S-adenosylmethionine decarboxylase, bacterial GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 AM378_14460 c2110df4f46c702d3d50155d03857488 616 Gene3D G3DSA:3.40.50.300 115 360 2.0E-77 T 15-10-2018 AM378_14460 c2110df4f46c702d3d50155d03857488 616 SUPERFAMILY SSF52540 5 365 7.02E-49 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_14460 c2110df4f46c702d3d50155d03857488 616 TIGRFAM TIGR01447 recD: exodeoxyribonuclease V, alpha subunit 5 612 2.8E-190 T 15-10-2018 IPR006344 RecBCD enzyme subunit RecD GO:0004386|GO:0006302|GO:0006310|GO:0008854|GO:0009338 AM378_14460 c2110df4f46c702d3d50155d03857488 616 SUPERFAMILY SSF52540 286 612 1.06E-61 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_14460 c2110df4f46c702d3d50155d03857488 616 Hamap MF_01487 RecBCD enzyme subunit RecD [recD]. 14 610 53.246 T 15-10-2018 IPR006344 RecBCD enzyme subunit RecD GO:0004386|GO:0006302|GO:0006310|GO:0008854|GO:0009338 AM378_14460 c2110df4f46c702d3d50155d03857488 616 Gene3D G3DSA:3.40.50.300 370 480 9.2E-26 T 15-10-2018 AM378_14460 c2110df4f46c702d3d50155d03857488 616 Gene3D G3DSA:3.40.50.300 486 601 8.5E-27 T 15-10-2018 AM378_14460 c2110df4f46c702d3d50155d03857488 616 Pfam PF13538 UvrD-like helicase C-terminal domain 541 587 4.6E-16 T 15-10-2018 IPR027785 UvrD-like helicase C-terminal domain AM378_14460 c2110df4f46c702d3d50155d03857488 616 Gene3D G3DSA:1.10.10.1020 1 114 5.1E-33 T 15-10-2018 AM378_14460 c2110df4f46c702d3d50155d03857488 616 Pfam PF13604 AAA domain 161 324 4.6E-32 T 15-10-2018 AM378_18560 5e27727be98b299b5df151328cb1d965 275 SUPERFAMILY SSF46785 2 81 2.87E-22 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM378_18560 5e27727be98b299b5df151328cb1d965 275 Gene3D G3DSA:3.40.190.290 89 274 2.5E-12 T 15-10-2018 AM378_18560 5e27727be98b299b5df151328cb1d965 275 Hamap MF_01233 HTH-type transcriptional regulator HdfR [hdfR]. 1 272 52.089 T 15-10-2018 IPR020890 Transcription regulator HTH, HdfR GO:0003677|GO:0003700|GO:0045892 AM378_18560 5e27727be98b299b5df151328cb1d965 275 Gene3D G3DSA:1.10.10.10 1 84 1.1E-24 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_18560 5e27727be98b299b5df151328cb1d965 275 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.3E-9 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_18560 5e27727be98b299b5df151328cb1d965 275 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.3E-9 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_18560 5e27727be98b299b5df151328cb1d965 275 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.3E-9 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_18560 5e27727be98b299b5df151328cb1d965 275 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 2.1E-20 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_18560 5e27727be98b299b5df151328cb1d965 275 SUPERFAMILY SSF53850 90 269 4.5E-22 T 15-10-2018 AM378_18560 5e27727be98b299b5df151328cb1d965 275 Pfam PF03466 LysR substrate binding domain 88 268 2.4E-21 T 15-10-2018 IPR005119 LysR, substrate-binding AM378_19145 b60429c82a5426052fa53861e79a15cb 207 Pfam PF01323 DSBA-like thioredoxin domain 40 186 7.4E-29 T 15-10-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590|Reactome: R-HSA-9033241 AM378_19145 b60429c82a5426052fa53861e79a15cb 207 Gene3D G3DSA:3.40.30.10 18 207 1.3E-52 T 15-10-2018 AM378_19145 b60429c82a5426052fa53861e79a15cb 207 SUPERFAMILY SSF52833 20 203 1.47E-46 T 15-10-2018 IPR036249 Thioredoxin-like superfamily AM378_19145 b60429c82a5426052fa53861e79a15cb 207 PIRSF PIRSF001488 1 207 7.6E-89 T 15-10-2018 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL AM378_19145 b60429c82a5426052fa53861e79a15cb 207 ProSitePatterns PS00194 Thioredoxin family active site. 41 59 - T 15-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 AM378_01655 1ad5a02f59ca4b8bf438e44bed815574 333 Gene3D G3DSA:1.10.3470.10 2 331 1.0E-106 T 15-10-2018 IPR037294 ABC transporter, BtuC-like AM378_01655 1ad5a02f59ca4b8bf438e44bed815574 333 SUPERFAMILY SSF81345 3 325 1.7E-75 T 15-10-2018 IPR037294 ABC transporter, BtuC-like AM378_01655 1ad5a02f59ca4b8bf438e44bed815574 333 Pfam PF01032 FecCD transport family 9 325 1.3E-88 T 15-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 AM378_00235 6cf142a7c2cc0056ec56e3d14521cdd6 59 Pfam PF10689 Protein of unknown function (DUF2496) 2 44 3.8E-24 T 15-10-2018 IPR019630 Protein of unknown function DUF2496, YbaM-related AM378_10780 1a35967f81e9943e5b267114f592c3ee 215 Pfam PF13532 2OG-Fe(II) oxygenase superfamily 21 212 2.5E-55 T 15-10-2018 IPR027450 Alpha-ketoglutarate-dependent dioxygenase AlkB-like AM378_10780 1a35967f81e9943e5b267114f592c3ee 215 SUPERFAMILY SSF51197 18 214 4.53E-60 T 15-10-2018 AM378_10780 1a35967f81e9943e5b267114f592c3ee 215 Gene3D G3DSA:2.60.120.590 15 214 3.7E-58 T 15-10-2018 IPR037151 Alpha-ketoglutarate-dependent dioxygenase AlkB-like superfamily AM378_01555 8b252d10f057f81fdef70fe2e674965b 155 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 31 64 5.4E-7 T 15-10-2018 IPR001451 Hexapeptide repeat AM378_01555 8b252d10f057f81fdef70fe2e674965b 155 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 102 135 3.8E-6 T 15-10-2018 IPR001451 Hexapeptide repeat AM378_01555 8b252d10f057f81fdef70fe2e674965b 155 Gene3D G3DSA:2.160.10.10 14 155 3.7E-32 T 15-10-2018 AM378_01555 8b252d10f057f81fdef70fe2e674965b 155 SUPERFAMILY SSF51161 18 154 5.76E-31 T 15-10-2018 IPR011004 Trimeric LpxA-like superfamily AM378_03550 0b31b81ff52d4e0c4107e063731f78d7 261 Hamap MF_02057 tRNA 5-carboxymethoxyuridine methyltransferase [cmoM]. 2 255 41.771 T 15-10-2018 IPR033664 tRNA 5-carboxymethoxyuridine methyltransferase GO:0008168 AM378_03550 0b31b81ff52d4e0c4107e063731f78d7 261 Pfam PF13847 Methyltransferase domain 44 149 1.9E-19 T 15-10-2018 IPR025714 Methyltransferase domain AM378_03550 0b31b81ff52d4e0c4107e063731f78d7 261 Gene3D G3DSA:3.40.50.150 8 261 7.7E-72 T 15-10-2018 AM378_03550 0b31b81ff52d4e0c4107e063731f78d7 261 SUPERFAMILY SSF53335 4 255 2.3E-38 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM378_20240 6e78e6735f4f1808cd97e384e09a8305 144 SUPERFAMILY SSF55729 1 128 2.92E-19 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase AM378_20240 6e78e6735f4f1808cd97e384e09a8305 144 Gene3D G3DSA:3.40.630.30 4 143 4.9E-16 T 15-10-2018 AM378_20240 6e78e6735f4f1808cd97e384e09a8305 144 Pfam PF13480 Acetyltransferase (GNAT) domain 32 102 1.3E-9 T 15-10-2018 IPR038740 BioF2-like, acetyltransferase domain KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147 AM378_17245 bf29f85725fa43d512957e37e35c759f 353 Gene3D G3DSA:3.40.190.10 140 256 2.3E-35 T 15-10-2018 AM378_17245 bf29f85725fa43d512957e37e35c759f 353 SUPERFAMILY SSF53850 36 345 4.3E-47 T 15-10-2018 AM378_17245 bf29f85725fa43d512957e37e35c759f 353 Pfam PF13343 Bacterial extracellular solute-binding protein 87 315 1.7E-35 T 15-10-2018 AM378_17245 bf29f85725fa43d512957e37e35c759f 353 Gene3D G3DSA:3.40.190.10 61 302 2.3E-35 T 15-10-2018 AM378_06615 0ebee64dcba137ac0cec99b7d8fe97b2 641 Pfam PF00905 Penicillin binding protein transpeptidase domain 273 612 3.9E-73 T 15-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 AM378_06615 0ebee64dcba137ac0cec99b7d8fe97b2 641 Gene3D G3DSA:3.30.1390.30 86 161 2.3E-49 T 15-10-2018 AM378_06615 0ebee64dcba137ac0cec99b7d8fe97b2 641 TIGRFAM TIGR03423 pbp2_mrdA: penicillin-binding protein 2 20 616 2.4E-222 T 15-10-2018 IPR017790 Penicillin-binding protein 2 GO:0008658|GO:0009002|GO:0009252|GO:0016020 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AM378_06615 0ebee64dcba137ac0cec99b7d8fe97b2 641 Hamap MF_02081 Peptidoglycan D,D-transpeptidase MrdA [mrdA]. 4 619 49.79 T 15-10-2018 IPR017790 Penicillin-binding protein 2 GO:0008658|GO:0009002|GO:0009252|GO:0016020 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AM378_06615 0ebee64dcba137ac0cec99b7d8fe97b2 641 SUPERFAMILY SSF56519 58 254 2.35E-51 T 15-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 AM378_06615 0ebee64dcba137ac0cec99b7d8fe97b2 641 Gene3D G3DSA:3.40.710.10 249 622 4.9E-91 T 15-10-2018 AM378_06615 0ebee64dcba137ac0cec99b7d8fe97b2 641 SUPERFAMILY SSF56601 255 619 5.09E-86 T 15-10-2018 IPR012338 Beta-lactamase/transpeptidase-like AM378_06615 0ebee64dcba137ac0cec99b7d8fe97b2 641 Gene3D G3DSA:3.90.1310.10 65 248 2.3E-49 T 15-10-2018 AM378_06615 0ebee64dcba137ac0cec99b7d8fe97b2 641 Pfam PF03717 Penicillin-binding Protein dimerisation domain 65 238 1.4E-48 T 15-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 AM378_07975 cc2966b458687efc1aacd0e36f3900d1 507 PIRSF PIRSF000538 4 499 6.7E-123 T 15-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 AM378_07975 cc2966b458687efc1aacd0e36f3900d1 507 Gene3D G3DSA:3.30.420.40 2 252 2.9E-79 T 15-10-2018 AM378_07975 cc2966b458687efc1aacd0e36f3900d1 507 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 361 381 - T 15-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 AM378_07975 cc2966b458687efc1aacd0e36f3900d1 507 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 7 251 3.0E-58 T 15-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 AM378_07975 cc2966b458687efc1aacd0e36f3900d1 507 Gene3D G3DSA:3.30.420.40 256 499 3.5E-64 T 15-10-2018 AM378_07975 cc2966b458687efc1aacd0e36f3900d1 507 SUPERFAMILY SSF53067 6 251 1.43E-72 T 15-10-2018 AM378_07975 cc2966b458687efc1aacd0e36f3900d1 507 SUPERFAMILY SSF53067 256 494 5.49E-59 T 15-10-2018 AM378_07975 cc2966b458687efc1aacd0e36f3900d1 507 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 261 448 1.2E-45 T 15-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 AM378_18395 72169b2daa541bad8532bc8481fcffba 134 Gene3D G3DSA:3.10.400.10 1 134 5.2E-47 T 15-10-2018 AM378_18395 72169b2daa541bad8532bc8481fcffba 134 Pfam PF04266 ASCH domain 25 132 1.3E-22 T 15-10-2018 IPR007374 ASCH domain AM378_18395 72169b2daa541bad8532bc8481fcffba 134 SUPERFAMILY SSF88697 9 132 1.17E-45 T 15-10-2018 IPR015947 PUA-like superfamily AM378_18395 72169b2daa541bad8532bc8481fcffba 134 SMART SM01022 16 132 2.8E-41 T 15-10-2018 IPR007374 ASCH domain AM378_18395 72169b2daa541bad8532bc8481fcffba 134 PIRSF PIRSF021320 1 134 2.8E-45 T 15-10-2018 IPR009326 Protein of unknown function DUF984 AM378_21140 f2d4c3f0dfb506c3b6d3c6acc9920445 117 Pfam PF04343 Protein of unknown function, DUF488 6 113 1.4E-25 T 15-10-2018 IPR007438 Protein of unknown function DUF488 AM378_21210 6a73b584037014d519e04fb5f4a11299 517 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 367 394 5.6E-54 T 15-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AM378_21210 6a73b584037014d519e04fb5f4a11299 517 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 396 425 5.6E-54 T 15-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AM378_21210 6a73b584037014d519e04fb5f4a11299 517 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 444 473 5.6E-54 T 15-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AM378_21210 6a73b584037014d519e04fb5f4a11299 517 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 15 40 5.6E-54 T 15-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AM378_21210 6a73b584037014d519e04fb5f4a11299 517 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 290 319 5.6E-54 T 15-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AM378_21210 6a73b584037014d519e04fb5f4a11299 517 SUPERFAMILY SSF47170 28 174 6.8E-12 T 15-10-2018 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily AM378_21210 6a73b584037014d519e04fb5f4a11299 517 SMART SM00304 216 268 3.0E-7 T 15-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AM378_21210 6a73b584037014d519e04fb5f4a11299 517 SUPERFAMILY SSF58104 236 517 1.57E-69 T 15-10-2018 AM378_21210 6a73b584037014d519e04fb5f4a11299 517 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 329 483 8.5E-53 T 15-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AM378_21210 6a73b584037014d519e04fb5f4a11299 517 SMART SM00283 269 516 7.4E-88 T 15-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AM378_21210 6a73b584037014d519e04fb5f4a11299 517 Pfam PF00672 HAMP domain 218 263 2.7E-7 T 15-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AM378_21210 6a73b584037014d519e04fb5f4a11299 517 Pfam PF02203 Tar ligand binding domain homologue 1 174 2.5E-21 T 15-10-2018 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding GO:0006935|GO:0007165 AM378_21210 6a73b584037014d519e04fb5f4a11299 517 Gene3D G3DSA:1.10.287.950 216 517 2.0E-86 T 15-10-2018 AM378_06770 50cd12f33f45e9506d133ee5f2fcf9ed 398 Pfam PF07690 Major Facilitator Superfamily 23 356 8.6E-37 T 15-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM378_06770 50cd12f33f45e9506d133ee5f2fcf9ed 398 Gene3D G3DSA:1.20.1250.20 11 388 1.4E-49 T 15-10-2018 AM378_06770 50cd12f33f45e9506d133ee5f2fcf9ed 398 SUPERFAMILY SSF103473 13 389 3.4E-55 T 15-10-2018 IPR036259 MFS transporter superfamily AM378_21805 920cacb6f9661d798ca5a4413874c074 163 ProSitePatterns PS00572 Glycosyl hydrolases family 1 active site. 57 65 - T 15-10-2018 IPR018120 Glycoside hydrolase family 1, active site AM378_21805 920cacb6f9661d798ca5a4413874c074 163 PRINTS PR00131 Glycosyl hydrolase family 1 signature 99 116 1.4E-12 T 15-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 AM378_21805 920cacb6f9661d798ca5a4413874c074 163 PRINTS PR00131 Glycosyl hydrolase family 1 signature 124 136 1.4E-12 T 15-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 AM378_21805 920cacb6f9661d798ca5a4413874c074 163 PRINTS PR00131 Glycosyl hydrolase family 1 signature 78 89 1.4E-12 T 15-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 AM378_21805 920cacb6f9661d798ca5a4413874c074 163 PRINTS PR00131 Glycosyl hydrolase family 1 signature 57 65 1.4E-12 T 15-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 AM378_21805 920cacb6f9661d798ca5a4413874c074 163 SUPERFAMILY SSF51445 39 161 6.78E-43 T 15-10-2018 IPR017853 Glycoside hydrolase superfamily AM378_21805 920cacb6f9661d798ca5a4413874c074 163 Pfam PF00232 Glycosyl hydrolase family 1 14 159 1.1E-36 T 15-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 AM378_21805 920cacb6f9661d798ca5a4413874c074 163 Gene3D G3DSA:3.20.20.80 5 162 4.0E-41 T 15-10-2018 AM378_08035 2b4ec0288fc702b7cafe99b74b9c9225 324 SUPERFAMILY SSF53850 91 322 5.65E-45 T 15-10-2018 AM378_08035 2b4ec0288fc702b7cafe99b74b9c9225 324 Gene3D G3DSA:3.40.190.10 92 303 2.1E-100 T 15-10-2018 AM378_08035 2b4ec0288fc702b7cafe99b74b9c9225 324 Gene3D G3DSA:3.40.190.10 167 267 2.1E-100 T 15-10-2018 AM378_08035 2b4ec0288fc702b7cafe99b74b9c9225 324 SUPERFAMILY SSF46785 1 85 2.89E-13 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM378_08035 2b4ec0288fc702b7cafe99b74b9c9225 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 1.7E-7 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_08035 2b4ec0288fc702b7cafe99b74b9c9225 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 1.7E-7 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_08035 2b4ec0288fc702b7cafe99b74b9c9225 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 1.7E-7 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_08035 2b4ec0288fc702b7cafe99b74b9c9225 324 Gene3D G3DSA:1.10.10.10 1 86 1.9E-21 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_08035 2b4ec0288fc702b7cafe99b74b9c9225 324 Pfam PF03466 LysR substrate binding domain 92 292 2.4E-41 T 15-10-2018 IPR005119 LysR, substrate-binding AM378_08035 2b4ec0288fc702b7cafe99b74b9c9225 324 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 64 6.0E-15 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_16265 8238c97b02e7953dab999880d42a3300 93 ProDom PD029230 GPA 5'REGION GP83 ORF83 GENE GP45 BACTERIOPHAGE SIMILAR ORF4 1 76 3.0E-16 T 15-10-2018 IPR020284 Protein of unknown function CP83 AM378_16265 8238c97b02e7953dab999880d42a3300 93 Pfam PF17399 Domain of unknown function (DUF5405) 4 85 8.9E-18 T 15-10-2018 IPR035404 Domain of unknown function DUF5405 AM378_02305 9c16395afd080a31629c2dbea9054e08 256 SMART SM01134 73 233 6.1E-70 T 15-10-2018 AM378_02305 9c16395afd080a31629c2dbea9054e08 256 SUPERFAMILY SSF100950 77 233 4.4E-27 T 15-10-2018 IPR037171 NagB/RpiA transferase-like AM378_02305 9c16395afd080a31629c2dbea9054e08 256 Gene3D G3DSA:1.10.10.10 4 55 8.3E-9 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_02305 9c16395afd080a31629c2dbea9054e08 256 SMART SM00420 6 58 2.9E-24 T 15-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AM378_02305 9c16395afd080a31629c2dbea9054e08 256 SUPERFAMILY SSF46785 5 60 9.74E-14 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM378_02305 9c16395afd080a31629c2dbea9054e08 256 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 15-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 AM378_02305 9c16395afd080a31629c2dbea9054e08 256 Pfam PF00455 DeoR C terminal sensor domain 77 232 5.3E-50 T 15-10-2018 IPR014036 DeoR C-terminal sensor domain AM378_02305 9c16395afd080a31629c2dbea9054e08 256 Pfam PF08220 DeoR-like helix-turn-helix domain 6 60 1.3E-18 T 15-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AM378_02305 9c16395afd080a31629c2dbea9054e08 256 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 5.1E-7 T 15-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AM378_02305 9c16395afd080a31629c2dbea9054e08 256 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 5.1E-7 T 15-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AM378_24015 234e03e2e73befd292eb1d6b9b07b38f 371 SUPERFAMILY SSF53807 25 363 8.24E-52 T 15-10-2018 AM378_24015 234e03e2e73befd292eb1d6b9b07b38f 371 Pfam PF01497 Periplasmic binding protein 74 311 8.7E-26 T 15-10-2018 IPR002491 ABC transporter periplasmic binding domain AM378_24015 234e03e2e73befd292eb1d6b9b07b38f 371 Gene3D G3DSA:3.40.50.1980 22 369 6.3E-96 T 15-10-2018 AM378_12025 9c7c285860c1e3a6bf70a121d07821c5 209 SUPERFAMILY SSF51161 30 200 4.44E-37 T 15-10-2018 IPR011004 Trimeric LpxA-like superfamily AM378_12025 9c7c285860c1e3a6bf70a121d07821c5 209 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 118 146 - T 15-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 AM378_12025 9c7c285860c1e3a6bf70a121d07821c5 209 Gene3D G3DSA:2.160.10.10 2 206 7.2E-54 T 15-10-2018 AM378_12025 9c7c285860c1e3a6bf70a121d07821c5 209 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 109 144 5.0E-10 T 15-10-2018 IPR001451 Hexapeptide repeat AM378_23325 6bf187188dee919002e6049b29f38c0e 118 Gene3D G3DSA:2.30.30.790 2 117 2.5E-16 T 15-10-2018 IPR038657 Ribosomal protein L19 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM378_23325 6bf187188dee919002e6049b29f38c0e 118 Hamap MF_00402 50S ribosomal protein L19 [rplS]. 2 114 30.441 T 15-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM378_23325 6bf187188dee919002e6049b29f38c0e 118 SUPERFAMILY SSF50104 2 115 1.2E-47 T 15-10-2018 IPR008991 Translation protein SH3-like domain superfamily AM378_23325 6bf187188dee919002e6049b29f38c0e 118 Pfam PF01245 Ribosomal protein L19 3 113 1.2E-49 T 15-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM378_23325 6bf187188dee919002e6049b29f38c0e 118 PRINTS PR00061 Ribosomal protein L19 signature 34 63 9.8E-43 T 15-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM378_23325 6bf187188dee919002e6049b29f38c0e 118 PRINTS PR00061 Ribosomal protein L19 signature 4 33 9.8E-43 T 15-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM378_23325 6bf187188dee919002e6049b29f38c0e 118 PRINTS PR00061 Ribosomal protein L19 signature 88 113 9.8E-43 T 15-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM378_23325 6bf187188dee919002e6049b29f38c0e 118 PIRSF PIRSF002191 1 118 3.9E-50 T 15-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM378_23325 6bf187188dee919002e6049b29f38c0e 118 TIGRFAM TIGR01024 rplS_bact: ribosomal protein bL19 3 113 8.7E-53 T 15-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM378_23325 6bf187188dee919002e6049b29f38c0e 118 ProSitePatterns PS01015 Ribosomal protein L19 signature. 86 101 - T 15-10-2018 IPR018257 Ribosomal protein L19, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM378_00775 16f581efc52bef9d246107e4c73c13e8 111 Gene3D G3DSA:2.20.25.10 1 41 5.2E-20 T 15-10-2018 AM378_00775 16f581efc52bef9d246107e4c73c13e8 111 SUPERFAMILY SSF82057 39 110 2.29E-29 T 15-10-2018 AM378_00775 16f581efc52bef9d246107e4c73c13e8 111 TIGRFAM TIGR00686 phnA: putative alkylphosphonate utilization operon protein PhnA 2 111 2.3E-59 T 15-10-2018 IPR004624 PhnA protein AM378_00775 16f581efc52bef9d246107e4c73c13e8 111 Pfam PF03831 PhnA domain 44 111 9.9E-35 T 15-10-2018 IPR013988 PhnA protein, C-terminal AM378_00775 16f581efc52bef9d246107e4c73c13e8 111 SUPERFAMILY SSF57783 1 36 1.87E-14 T 15-10-2018 AM378_00775 16f581efc52bef9d246107e4c73c13e8 111 Gene3D G3DSA:2.30.30.40 42 111 5.7E-36 T 15-10-2018 AM378_00775 16f581efc52bef9d246107e4c73c13e8 111 Pfam PF08274 PhnA Zinc-Ribbon 2 31 1.3E-17 T 15-10-2018 IPR013987 PhnA protein, N-terminal AM378_14005 912a31c681265c12922cc16ab88fe8e6 451 PIRSF PIRSF005348 13 450 5.9E-158 T 15-10-2018 IPR004679 2-hydroxycarboxylate transporter GO:0008514|GO:0015711|GO:0016021 AM378_14005 912a31c681265c12922cc16ab88fe8e6 451 Pfam PF03390 2-hydroxycarboxylate transporter family 34 442 2.8E-141 T 15-10-2018 IPR004679 2-hydroxycarboxylate transporter GO:0008514|GO:0015711|GO:0016021 AM378_20560 97eb7129cbddad829919b10b6fea855f 316 PIRSF PIRSF000545 1 316 1.2E-146 T 15-10-2018 IPR004566 Pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 AM378_20560 97eb7129cbddad829919b10b6fea855f 316 TIGRFAM TIGR00554 panK_bact: pantothenate kinase 10 316 5.8E-168 T 15-10-2018 IPR004566 Pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 AM378_20560 97eb7129cbddad829919b10b6fea855f 316 SUPERFAMILY SSF52540 10 315 6.1E-75 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_20560 97eb7129cbddad829919b10b6fea855f 316 Gene3D G3DSA:3.40.50.300 9 316 1.7E-93 T 15-10-2018 AM378_20560 97eb7129cbddad829919b10b6fea855f 316 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 90 243 5.3E-15 T 15-10-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0016301 Reactome: R-HSA-73614 AM378_20560 97eb7129cbddad829919b10b6fea855f 316 Hamap MF_00215 Pantothenate kinase [coaA]. 1 316 187.812 T 15-10-2018 IPR004566 Pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 AM378_07210 83fc3698699a1cf4100a5bc95f8061b6 447 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 75 407 2.6E-59 T 15-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme AM378_07210 83fc3698699a1cf4100a5bc95f8061b6 447 Gene3D G3DSA:3.40.50.1100 116 238 3.2E-190 T 15-10-2018 AM378_07210 83fc3698699a1cf4100a5bc95f8061b6 447 Hamap MF_01030 D-serine dehydratase [dsdA]. 1 447 261.898 T 15-10-2018 IPR011780 D-serine ammonia-lyase GO:0008721|GO:0030170|GO:0046416 KEGG: 00260+4.3.1.18 AM378_07210 83fc3698699a1cf4100a5bc95f8061b6 447 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 108 122 - T 15-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 AM378_07210 83fc3698699a1cf4100a5bc95f8061b6 447 TIGRFAM TIGR02035 D_Ser_am_lyase: D-serine ammonia-lyase 9 438 2.4E-215 T 15-10-2018 IPR011780 D-serine ammonia-lyase GO:0008721|GO:0030170|GO:0046416 KEGG: 00260+4.3.1.18 AM378_07210 83fc3698699a1cf4100a5bc95f8061b6 447 Gene3D G3DSA:3.40.50.1100 24 438 3.2E-190 T 15-10-2018 AM378_07210 83fc3698699a1cf4100a5bc95f8061b6 447 SUPERFAMILY SSF53686 61 438 7.41E-52 T 15-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme AM378_14535 56af00288476fa982cbaec9ea11025fb 346 Gene3D G3DSA:3.20.20.100 1 346 1.6E-139 T 15-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily AM378_14535 56af00288476fa982cbaec9ea11025fb 346 SUPERFAMILY SSF51430 1 344 2.49E-107 T 15-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily AM378_14535 56af00288476fa982cbaec9ea11025fb 346 Pfam PF00248 Aldo/keto reductase family 16 337 2.1E-73 T 15-10-2018 IPR023210 NADP-dependent oxidoreductase domain AM378_03960 112e69aab9d6d7563a154b19545a784c 142 Pfam PF00582 Universal stress protein family 1 142 1.6E-23 T 15-10-2018 IPR006016 UspA AM378_03960 112e69aab9d6d7563a154b19545a784c 142 SUPERFAMILY SSF52402 2 142 1.17E-27 T 15-10-2018 AM378_03960 112e69aab9d6d7563a154b19545a784c 142 PRINTS PR01438 Universal stress protein signature 120 142 6.2E-12 T 15-10-2018 IPR006015 Universal stress protein A AM378_03960 112e69aab9d6d7563a154b19545a784c 142 PRINTS PR01438 Universal stress protein signature 2 20 6.2E-12 T 15-10-2018 IPR006015 Universal stress protein A AM378_03960 112e69aab9d6d7563a154b19545a784c 142 PRINTS PR01438 Universal stress protein signature 103 115 6.2E-12 T 15-10-2018 IPR006015 Universal stress protein A AM378_03960 112e69aab9d6d7563a154b19545a784c 142 Gene3D G3DSA:3.40.50.620 1 142 1.0E-32 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM378_03960 112e69aab9d6d7563a154b19545a784c 142 PIRSF PIRSF006276 1 142 1.1E-17 T 15-10-2018 IPR006015 Universal stress protein A AM378_12210 1bda4239b94048a0dd337656d8b446e7 219 PIRSF PIRSF002764 1 219 1.1E-85 T 15-10-2018 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria AM378_12210 1bda4239b94048a0dd337656d8b446e7 219 Pfam PF03379 CcmB protein 3 216 2.9E-92 T 15-10-2018 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 AM378_12210 1bda4239b94048a0dd337656d8b446e7 219 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 155 174 6.3E-73 T 15-10-2018 AM378_12210 1bda4239b94048a0dd337656d8b446e7 219 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 26 47 6.3E-73 T 15-10-2018 AM378_12210 1bda4239b94048a0dd337656d8b446e7 219 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 75 98 6.3E-73 T 15-10-2018 AM378_12210 1bda4239b94048a0dd337656d8b446e7 219 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 192 215 6.3E-73 T 15-10-2018 AM378_12210 1bda4239b94048a0dd337656d8b446e7 219 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 100 118 6.3E-73 T 15-10-2018 AM378_12210 1bda4239b94048a0dd337656d8b446e7 219 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 52 69 6.3E-73 T 15-10-2018 AM378_12210 1bda4239b94048a0dd337656d8b446e7 219 TIGRFAM TIGR01190 ccmB: heme exporter protein CcmB 5 215 3.2E-96 T 15-10-2018 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria AM378_02945 d261c90c57e13e05127e999b7a0b3809 461 Pfam PF00474 Sodium:solute symporter family 32 412 1.3E-36 T 15-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 AM378_02945 d261c90c57e13e05127e999b7a0b3809 461 ProSitePatterns PS00457 Sodium:solute symporter family signature 2. 394 414 - T 15-10-2018 IPR018212 Sodium/solute symporter, conserved site AM378_02945 d261c90c57e13e05127e999b7a0b3809 461 Gene3D G3DSA:1.20.1730.10 21 460 2.8E-67 T 15-10-2018 IPR038377 Sodium/glucose symporter superfamily AM378_22875 f09187341528ac5404ce61ce8c183e25 171 Pfam PF05258 Protein of unknown function (DUF721) 26 98 1.2E-14 T 15-10-2018 IPR007922 Protein of unknown function DUF721/UPF0232 AM378_21915 1fa96e61a82ac1ffe6a78c485cfb9e10 232 Pfam PF01144 Coenzyme A transferase 10 217 1.5E-73 T 15-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 AM378_21915 1fa96e61a82ac1ffe6a78c485cfb9e10 232 TIGRFAM TIGR02429 pcaI_scoA_fam: 3-oxoacid CoA-transferase, A subunit 4 218 1.0E-74 T 15-10-2018 IPR012792 3-oxoacid CoA-transferase, subunit A GO:0008410 Reactome: R-HSA-77108 AM378_21915 1fa96e61a82ac1ffe6a78c485cfb9e10 232 SMART SM00882 8 219 3.6E-86 T 15-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 AM378_21915 1fa96e61a82ac1ffe6a78c485cfb9e10 232 SUPERFAMILY SSF100950 5 227 2.09E-86 T 15-10-2018 IPR037171 NagB/RpiA transferase-like AM378_21915 1fa96e61a82ac1ffe6a78c485cfb9e10 232 Gene3D G3DSA:3.40.1080.10 2 228 8.7E-95 T 15-10-2018 AM378_21915 1fa96e61a82ac1ffe6a78c485cfb9e10 232 ProSitePatterns PS01273 Coenzyme A transferases signature 1. 20 35 - T 15-10-2018 IPR004163 Coenzyme A transferase binding site GO:0008410 Reactome: R-HSA-77108 AM378_03085 8000a53734ba97c11c7f197b43448fe2 201 Pfam PF01569 PAP2 superfamily 66 167 6.8E-13 T 15-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AM378_03085 8000a53734ba97c11c7f197b43448fe2 201 SMART SM00014 60 168 2.3E-23 T 15-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AM378_03085 8000a53734ba97c11c7f197b43448fe2 201 Gene3D G3DSA:1.20.144.10 92 185 3.1E-18 T 15-10-2018 AM378_03085 8000a53734ba97c11c7f197b43448fe2 201 SUPERFAMILY SSF48317 1 175 8.76E-35 T 15-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily AM378_12790 36371942aaf2ad159572e75d263ad755 143 SUPERFAMILY SSF55729 13 127 1.49E-22 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase AM378_12790 36371942aaf2ad159572e75d263ad755 143 Pfam PF13673 Acetyltransferase (GNAT) domain 32 135 4.7E-13 T 15-10-2018 IPR000182 GNAT domain AM378_12790 36371942aaf2ad159572e75d263ad755 143 Gene3D G3DSA:3.40.630.30 2 131 2.7E-24 T 15-10-2018 AM378_09655 4753be2b061ea1450a2b9926da071d0c 253 Pfam PF00813 FliP family 55 247 2.3E-78 T 15-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AM378_09655 4753be2b061ea1450a2b9926da071d0c 253 TIGRFAM TIGR01103 fliP: flagellar biosynthetic protein FliP 55 251 4.4E-93 T 15-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 AM378_09655 4753be2b061ea1450a2b9926da071d0c 253 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 225 250 1.7E-68 T 15-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AM378_09655 4753be2b061ea1450a2b9926da071d0c 253 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 72 92 1.7E-68 T 15-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AM378_09655 4753be2b061ea1450a2b9926da071d0c 253 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 53 72 1.7E-68 T 15-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AM378_09655 4753be2b061ea1450a2b9926da071d0c 253 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 92 111 1.7E-68 T 15-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AM378_09655 4753be2b061ea1450a2b9926da071d0c 253 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 180 200 1.7E-68 T 15-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AM378_09655 4753be2b061ea1450a2b9926da071d0c 253 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 201 222 1.7E-68 T 15-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AM378_09655 4753be2b061ea1450a2b9926da071d0c 253 ProSitePatterns PS01061 Flagella transport protein fliP family signature 2. 228 240 - T 15-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AM378_09655 4753be2b061ea1450a2b9926da071d0c 253 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 51 60 1.0E-31 T 15-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 AM378_09655 4753be2b061ea1450a2b9926da071d0c 253 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 241 251 1.0E-31 T 15-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 AM378_09655 4753be2b061ea1450a2b9926da071d0c 253 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 173 185 1.0E-31 T 15-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 AM378_09655 4753be2b061ea1450a2b9926da071d0c 253 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 111 123 1.0E-31 T 15-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 AM378_09655 4753be2b061ea1450a2b9926da071d0c 253 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 123 137 1.0E-31 T 15-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 AM378_09655 4753be2b061ea1450a2b9926da071d0c 253 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 151 163 1.0E-31 T 15-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 AM378_09655 4753be2b061ea1450a2b9926da071d0c 253 ProSitePatterns PS01060 Flagella transport protein fliP family signature 1. 180 195 - T 15-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AM378_01665 0e7c31e3db96a73074b9f0ad33b1168a 241 Pfam PF13531 Bacterial extracellular solute-binding protein 5 236 6.6E-37 T 15-10-2018 AM378_01665 0e7c31e3db96a73074b9f0ad33b1168a 241 Gene3D G3DSA:3.40.190.10 80 204 6.3E-31 T 15-10-2018 AM378_01665 0e7c31e3db96a73074b9f0ad33b1168a 241 Gene3D G3DSA:3.40.190.10 7 236 6.3E-31 T 15-10-2018 AM378_01665 0e7c31e3db96a73074b9f0ad33b1168a 241 SUPERFAMILY SSF53850 3 237 2.0E-34 T 15-10-2018 AM378_00145 e4f6fbaa796c4ae9382e05d977e1c6cc 376 PIRSF PIRSF015761 40 345 9.3E-28 T 15-10-2018 IPR007812 Type II secretion system protein L GO:0008565|GO:0009276|GO:0015031|GO:0016021 AM378_00145 e4f6fbaa796c4ae9382e05d977e1c6cc 376 Gene3D G3DSA:3.30.420.380 6 224 1.6E-40 T 15-10-2018 AM378_00145 e4f6fbaa796c4ae9382e05d977e1c6cc 376 SUPERFAMILY SSF53067 145 225 2.4E-7 T 15-10-2018 AM378_00145 e4f6fbaa796c4ae9382e05d977e1c6cc 376 Gene3D G3DSA:3.30.420.370 141 202 1.6E-40 T 15-10-2018 AM378_00145 e4f6fbaa796c4ae9382e05d977e1c6cc 376 Pfam PF05134 Type II secretion system (T2SS), protein L 33 226 1.7E-34 T 15-10-2018 IPR024230 GspL, cytoplasmic actin-ATPase-like domain AM378_00145 e4f6fbaa796c4ae9382e05d977e1c6cc 376 SUPERFAMILY SSF53067 5 144 1.29E-17 T 15-10-2018 AM378_20190 f17809ae2faa23f3db54224e573b4b1c 206 Pfam PF01810 LysE type translocator 14 202 3.3E-43 T 15-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AM378_20190 f17809ae2faa23f3db54224e573b4b1c 206 PIRSF PIRSF006324 1 205 1.8E-54 T 15-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AM378_16120 2d1b6037c252b41da4e0635840535026 93 Pfam PF10109 Phage tail assembly chaperone proteins, E, or 41 or 14 8 87 4.2E-9 T 15-10-2018 IPR019289 Bacteriophage tail protein Gp41, putative AM378_14520 734cca961d7fe0790b5641ce5790265b 228 Hamap MF_00759 DNA mismatch repair protein MutH [mutH]. 1 228 154.726 T 15-10-2018 IPR004230 DNA mismatch repair protein MutH GO:0003677|GO:0004519|GO:0006304 AM378_14520 734cca961d7fe0790b5641ce5790265b 228 Gene3D G3DSA:3.40.600.10 5 228 1.6E-53 T 15-10-2018 IPR037057 DNA mismatch repair MutH/Restriction endonuclease, type II superfamily GO:0003677|GO:0004519 AM378_14520 734cca961d7fe0790b5641ce5790265b 228 TIGRFAM TIGR02248 mutH_TIGR: DNA mismatch repair endonuclease MutH 10 226 3.7E-109 T 15-10-2018 IPR004230 DNA mismatch repair protein MutH GO:0003677|GO:0004519|GO:0006304 AM378_14520 734cca961d7fe0790b5641ce5790265b 228 SMART SM00927 59 157 4.8E-63 T 15-10-2018 IPR011337 DNA mismatch repair MutH/Restriction endonuclease, type II GO:0003677|GO:0004519 AM378_14520 734cca961d7fe0790b5641ce5790265b 228 Pfam PF02976 DNA mismatch repair enzyme MutH 59 157 2.1E-32 T 15-10-2018 IPR011337 DNA mismatch repair MutH/Restriction endonuclease, type II GO:0003677|GO:0004519 AM378_14520 734cca961d7fe0790b5641ce5790265b 228 SUPERFAMILY SSF52980 8 226 1.34E-79 T 15-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 AM378_11020 e87305ba9527a94ad0f0db1e7ce37d77 372 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 69 87 4.8E-28 T 15-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 AM378_11020 e87305ba9527a94ad0f0db1e7ce37d77 372 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 28 44 4.8E-28 T 15-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 AM378_11020 e87305ba9527a94ad0f0db1e7ce37d77 372 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 282 295 4.8E-28 T 15-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 AM378_11020 e87305ba9527a94ad0f0db1e7ce37d77 372 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 50 66 4.8E-28 T 15-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 AM378_11020 e87305ba9527a94ad0f0db1e7ce37d77 372 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 333 348 4.8E-28 T 15-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 AM378_11020 e87305ba9527a94ad0f0db1e7ce37d77 372 Pfam PF13458 Periplasmic binding protein 28 367 9.3E-65 T 15-10-2018 IPR028081 Leucine-binding protein domain AM378_11020 e87305ba9527a94ad0f0db1e7ce37d77 372 Gene3D G3DSA:3.40.50.2300 35 349 2.2E-109 T 15-10-2018 AM378_11020 e87305ba9527a94ad0f0db1e7ce37d77 372 Gene3D G3DSA:3.40.50.2300 147 277 2.2E-109 T 15-10-2018 AM378_11020 e87305ba9527a94ad0f0db1e7ce37d77 372 SUPERFAMILY SSF53822 27 370 1.18E-93 T 15-10-2018 IPR028082 Periplasmic binding protein-like I AM378_03780 14042bc4b2ae51aadac2ecabcd8e4df4 109 TIGRFAM TIGR03342 dsrC_tusE_dsvC: sulfur relay protein, TusE/DsrC/DsvC family 2 109 4.0E-51 T 15-10-2018 IPR007453 Sulphur transfer protein DsrC/TusE AM378_03780 14042bc4b2ae51aadac2ecabcd8e4df4 109 SUPERFAMILY SSF69721 2 109 1.44E-41 T 15-10-2018 IPR025526 DsrC-like domain superfamily AM378_03780 14042bc4b2ae51aadac2ecabcd8e4df4 109 PIRSF PIRSF006223 2 109 2.9E-46 T 15-10-2018 IPR007453 Sulphur transfer protein DsrC/TusE AM378_03780 14042bc4b2ae51aadac2ecabcd8e4df4 109 Pfam PF04358 DsrC like protein 3 109 4.9E-46 T 15-10-2018 IPR007453 Sulphur transfer protein DsrC/TusE AM378_03780 14042bc4b2ae51aadac2ecabcd8e4df4 109 Gene3D G3DSA:3.30.1420.10 1 37 3.6E-11 T 15-10-2018 AM378_03780 14042bc4b2ae51aadac2ecabcd8e4df4 109 Gene3D G3DSA:1.10.10.370 39 109 1.9E-33 T 15-10-2018 AM378_22905 bf64095ab38d3004b96f1a676b482e00 204 Hamap MF_00376 Dephospho-CoA kinase [coaE]. 2 192 27.952 T 15-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 AM378_22905 bf64095ab38d3004b96f1a676b482e00 204 TIGRFAM TIGR00152 TIGR00152: dephospho-CoA kinase 4 186 1.3E-62 T 15-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 AM378_22905 bf64095ab38d3004b96f1a676b482e00 204 Gene3D G3DSA:3.40.50.300 1 204 3.2E-69 T 15-10-2018 AM378_22905 bf64095ab38d3004b96f1a676b482e00 204 Pfam PF01121 Dephospho-CoA kinase 3 179 3.0E-72 T 15-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 AM378_22905 bf64095ab38d3004b96f1a676b482e00 204 SUPERFAMILY SSF52540 1 191 1.59E-42 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_01250 f4fdeebf09f0958d4f5c74e5f1d8761f 251 Pfam PF13649 Methyltransferase domain 45 145 3.8E-13 T 15-10-2018 AM378_01250 f4fdeebf09f0958d4f5c74e5f1d8761f 251 SUPERFAMILY SSF53335 20 191 1.94E-28 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM378_01250 f4fdeebf09f0958d4f5c74e5f1d8761f 251 Gene3D G3DSA:3.40.50.150 7 251 5.4E-33 T 15-10-2018 AM378_16210 8bfa2b6e65a659f89de101cb6d779aef 219 Pfam PF05944 Phage small terminase subunit 36 164 8.6E-48 T 15-10-2018 IPR010270 Bacteriophage P2, GpM GO:0003677|GO:0004519|GO:0019069 AM378_01040 9c282a043c19f2d37cde4df80a377d0b 388 ProSitePatterns PS01217 ATP-citrate lyase / succinyl-CoA ligases family signature 3. 257 282 - T 15-10-2018 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AM378_01040 9c282a043c19f2d37cde4df80a377d0b 388 Pfam PF08442 ATP-grasp domain 2 203 2.2E-83 T 15-10-2018 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 AM378_01040 9c282a043c19f2d37cde4df80a377d0b 388 PIRSF PIRSF001554 1 388 4.0E-156 T 15-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 AM378_01040 9c282a043c19f2d37cde4df80a377d0b 388 Gene3D G3DSA:3.30.470.20 1 234 8.3E-97 T 15-10-2018 AM378_01040 9c282a043c19f2d37cde4df80a377d0b 388 Hamap MF_00558 Succinate--CoA ligase [ADP-forming] subunit beta [sucC]. 1 386 43.445 T 15-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 AM378_01040 9c282a043c19f2d37cde4df80a377d0b 388 Gene3D G3DSA:3.30.1490.20 21 104 8.3E-97 T 15-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 AM378_01040 9c282a043c19f2d37cde4df80a377d0b 388 TIGRFAM TIGR01016 sucCoAbeta: succinate-CoA ligase, beta subunit 1 385 1.1E-181 T 15-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 AM378_01040 9c282a043c19f2d37cde4df80a377d0b 388 Pfam PF00549 CoA-ligase 262 382 3.7E-24 T 15-10-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AM378_01040 9c282a043c19f2d37cde4df80a377d0b 388 SUPERFAMILY SSF56059 1 238 6.01E-82 T 15-10-2018 AM378_01040 9c282a043c19f2d37cde4df80a377d0b 388 SUPERFAMILY SSF52210 239 385 7.2E-53 T 15-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AM378_01040 9c282a043c19f2d37cde4df80a377d0b 388 Gene3D G3DSA:3.40.50.261 240 388 2.1E-55 T 15-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AM378_03670 4adeefaf39cf67160256b28a021f74e7 548 Pfam PF02470 MlaD protein 44 134 8.6E-11 T 15-10-2018 IPR003399 Mce/MlaD AM378_03670 4adeefaf39cf67160256b28a021f74e7 548 Pfam PF02470 MlaD protein 289 391 3.9E-13 T 15-10-2018 IPR003399 Mce/MlaD AM378_03670 4adeefaf39cf67160256b28a021f74e7 548 Pfam PF02470 MlaD protein 160 219 8.7E-8 T 15-10-2018 IPR003399 Mce/MlaD AM378_11910 3fe1b0fd827b25660dc5d28224a5cb40 304 Pfam PF08338 Domain of unknown function (DUF1731) 250 295 5.1E-21 T 15-10-2018 IPR013549 Domain of unknown function DUF1731 AM378_11910 3fe1b0fd827b25660dc5d28224a5cb40 304 SUPERFAMILY SSF51735 1 298 1.33E-44 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily AM378_11910 3fe1b0fd827b25660dc5d28224a5cb40 304 Gene3D G3DSA:3.40.50.720 2 302 2.2E-80 T 15-10-2018 AM378_11910 3fe1b0fd827b25660dc5d28224a5cb40 304 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 215 1.9E-18 T 15-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 AM378_11910 3fe1b0fd827b25660dc5d28224a5cb40 304 TIGRFAM TIGR01777 yfcH: TIGR01777 family protein 3 293 4.5E-113 T 15-10-2018 IPR010099 Epimerase family protein SDR39U1 AM378_00940 476310b0a108224857d3bf8ada190852 29 Pfam PF09604 F subunit of K+-transporting ATPase (Potass_KdpF) 8 29 2.7E-7 T 15-10-2018 IPR011726 K+ transporting P-type ATPase, F subunit GO:0005886|GO:0008556|GO:0043462 AM378_00940 476310b0a108224857d3bf8ada190852 29 TIGRFAM TIGR02115 potass_kdpF: K+-transporting ATPase, F subunit 8 29 1.8E-8 T 15-10-2018 IPR011726 K+ transporting P-type ATPase, F subunit GO:0005886|GO:0008556|GO:0043462 AM378_14640 82882f2bdc9ff2ec214304052f140339 406 Gene3D G3DSA:1.20.1250.20 15 207 8.9E-17 T 15-10-2018 AM378_14640 82882f2bdc9ff2ec214304052f140339 406 Gene3D G3DSA:1.20.1250.20 223 403 8.0E-12 T 15-10-2018 AM378_14640 82882f2bdc9ff2ec214304052f140339 406 Pfam PF07690 Major Facilitator Superfamily 37 234 4.3E-11 T 15-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM378_14640 82882f2bdc9ff2ec214304052f140339 406 SUPERFAMILY SSF103473 11 403 1.31E-42 T 15-10-2018 IPR036259 MFS transporter superfamily AM378_21020 a6563acac6c0051717026902c8f0cbbc 156 Pfam PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE 9 133 1.7E-41 T 15-10-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 AM378_21020 a6563acac6c0051717026902c8f0cbbc 156 SUPERFAMILY SSF52540 27 139 1.17E-24 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_21020 a6563acac6c0051717026902c8f0cbbc 156 Gene3D G3DSA:3.40.50.300 1 153 7.5E-48 T 15-10-2018 AM378_21020 a6563acac6c0051717026902c8f0cbbc 156 TIGRFAM TIGR00150 T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE 8 140 4.0E-55 T 15-10-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 AM378_07450 f6d7f031bcd4029657811a5441a387da 304 TIGRFAM TIGR03707 PPK2_P_aer: polyphosphate kinase 2 51 274 2.2E-113 T 15-10-2018 IPR022486 Polyphosphate kinase 2, PA0141 GO:0006793|GO:0008976 KEGG: 00190+2.7.4.1 AM378_07450 f6d7f031bcd4029657811a5441a387da 304 PIRSF PIRSF028756 16 304 1.5E-133 T 15-10-2018 IPR016898 Polyphosphate kinase 2 KEGG: 00190+2.7.4.1 AM378_07450 f6d7f031bcd4029657811a5441a387da 304 SUPERFAMILY SSF52540 80 269 7.58E-31 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_07450 f6d7f031bcd4029657811a5441a387da 304 Gene3D G3DSA:3.40.50.300 13 287 2.0E-97 T 15-10-2018 AM378_07450 f6d7f031bcd4029657811a5441a387da 304 Pfam PF03976 Polyphosphate kinase 2 (PPK2) 51 274 6.7E-112 T 15-10-2018 IPR022488 Polyphosphate kinase-2-related AM378_04750 b2c7a69e061c3b43a73434efa63f217f 240 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 173 230 8.4E-13 T 15-10-2018 IPR016148 Pili assembly chaperone, C-terminal AM378_04750 b2c7a69e061c3b43a73434efa63f217f 240 Gene3D G3DSA:2.60.40.10 153 235 8.0E-15 T 15-10-2018 IPR013783 Immunoglobulin-like fold AM378_04750 b2c7a69e061c3b43a73434efa63f217f 240 SUPERFAMILY SSF49584 145 234 1.44E-14 T 15-10-2018 IPR036316 Pili assembly chaperone, C-terminal domain superfamily AM378_04750 b2c7a69e061c3b43a73434efa63f217f 240 PRINTS PR00969 Pili chaperone signature 79 100 2.1E-25 T 15-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM378_04750 b2c7a69e061c3b43a73434efa63f217f 240 PRINTS PR00969 Pili chaperone signature 133 148 2.1E-25 T 15-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM378_04750 b2c7a69e061c3b43a73434efa63f217f 240 PRINTS PR00969 Pili chaperone signature 168 183 2.1E-25 T 15-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM378_04750 b2c7a69e061c3b43a73434efa63f217f 240 PRINTS PR00969 Pili chaperone signature 30 39 2.1E-25 T 15-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM378_04750 b2c7a69e061c3b43a73434efa63f217f 240 PRINTS PR00969 Pili chaperone signature 107 124 2.1E-25 T 15-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM378_04750 b2c7a69e061c3b43a73434efa63f217f 240 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 30 151 2.5E-37 T 15-10-2018 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 AM378_04750 b2c7a69e061c3b43a73434efa63f217f 240 Gene3D G3DSA:2.60.40.10 32 152 2.4E-37 T 15-10-2018 IPR013783 Immunoglobulin-like fold AM378_04750 b2c7a69e061c3b43a73434efa63f217f 240 SUPERFAMILY SSF49354 24 151 2.01E-35 T 15-10-2018 IPR008962 PapD-like superfamily AM378_13000 1179e8f38575dcc19ea484a981b30078 163 Pfam PF08937 MTH538 TIR-like domain (DUF1863) 3 113 2.5E-24 T 15-10-2018 IPR015032 MTH538 TIR-like domain AM378_13000 1179e8f38575dcc19ea484a981b30078 163 SUPERFAMILY SSF52206 39 101 1.96E-10 T 15-10-2018 IPR036490 Hypothetical protein MTH538 superfamily AM378_22450 5d33782a2834c0360ee8d12a3f21fabc 238 Gene3D G3DSA:1.10.10.10 130 236 6.4E-26 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_22450 5d33782a2834c0360ee8d12a3f21fabc 238 SUPERFAMILY SSF46894 137 234 2.64E-21 T 15-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AM378_22450 5d33782a2834c0360ee8d12a3f21fabc 238 Pfam PF00486 Transcriptional regulatory protein, C terminal 156 232 4.3E-18 T 15-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AM378_22450 5d33782a2834c0360ee8d12a3f21fabc 238 Gene3D G3DSA:3.40.50.2300 1 129 5.2E-33 T 15-10-2018 AM378_22450 5d33782a2834c0360ee8d12a3f21fabc 238 SMART SM00448 4 114 2.5E-38 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM378_22450 5d33782a2834c0360ee8d12a3f21fabc 238 Pfam PF00072 Response regulator receiver domain 6 113 5.6E-27 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM378_22450 5d33782a2834c0360ee8d12a3f21fabc 238 SUPERFAMILY SSF52172 2 127 1.2E-35 T 15-10-2018 IPR011006 CheY-like superfamily AM378_22450 5d33782a2834c0360ee8d12a3f21fabc 238 SMART SM00862 156 232 1.6E-14 T 15-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AM378_15535 4ac7e90967065dcbc7673049f4f834f9 350 Pfam PF13478 XdhC Rossmann domain 168 313 6.1E-34 T 15-10-2018 IPR027051 XdhC Rossmann domain AM378_15535 4ac7e90967065dcbc7673049f4f834f9 350 Gene3D G3DSA:3.40.50.720 167 318 6.1E-38 T 15-10-2018 AM378_15535 4ac7e90967065dcbc7673049f4f834f9 350 Pfam PF02625 XdhC and CoxI family 17 81 5.4E-17 T 15-10-2018 IPR003777 XdhC- CoxI AM378_15910 aaabaea8afc66f92436a5c9b4521c4cb 471 SUPERFAMILY SSF49503 172 288 5.88E-32 T 15-10-2018 IPR008972 Cupredoxin AM378_15910 aaabaea8afc66f92436a5c9b4521c4cb 471 Gene3D G3DSA:2.60.40.420 165 345 9.0E-58 T 15-10-2018 IPR008972 Cupredoxin AM378_15910 aaabaea8afc66f92436a5c9b4521c4cb 471 Pfam PF00394 Multicopper oxidase 208 289 3.6E-4 T 15-10-2018 IPR001117 Multicopper oxidase, type 1 GO:0055114 AM378_15910 aaabaea8afc66f92436a5c9b4521c4cb 471 Pfam PF07732 Multicopper oxidase 53 166 1.8E-23 T 15-10-2018 IPR011707 Multicopper oxidase, type 3 GO:0005507 AM378_15910 aaabaea8afc66f92436a5c9b4521c4cb 471 Gene3D G3DSA:2.60.40.420 346 471 3.7E-26 T 15-10-2018 IPR008972 Cupredoxin AM378_15910 aaabaea8afc66f92436a5c9b4521c4cb 471 SUPERFAMILY SSF49503 315 467 2.17E-18 T 15-10-2018 IPR008972 Cupredoxin AM378_15910 aaabaea8afc66f92436a5c9b4521c4cb 471 Gene3D G3DSA:2.60.40.420 28 164 6.8E-30 T 15-10-2018 IPR008972 Cupredoxin AM378_15910 aaabaea8afc66f92436a5c9b4521c4cb 471 Hamap MF_00915 Cell division protein FtsP [ftsP]. 1 468 58.38 T 15-10-2018 IPR026589 Cell division protein FtsP GO:0043093 AM378_15910 aaabaea8afc66f92436a5c9b4521c4cb 471 SUPERFAMILY SSF49503 3 165 1.54E-22 T 15-10-2018 IPR008972 Cupredoxin AM378_15910 aaabaea8afc66f92436a5c9b4521c4cb 471 Pfam PF07731 Multicopper oxidase 356 469 9.3E-15 T 15-10-2018 IPR011706 Multicopper oxidase, type 2 GO:0005507|GO:0016491|GO:0055114 AM378_08665 275d6f6e72b8dae36b6449c52b8a698e 252 SUPERFAMILY SSF52540 3 215 1.4E-53 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_08665 275d6f6e72b8dae36b6449c52b8a698e 252 SMART SM00382 29 199 5.9E-10 T 15-10-2018 IPR003593 AAA+ ATPase domain AM378_08665 275d6f6e72b8dae36b6449c52b8a698e 252 Gene3D G3DSA:3.40.50.300 1 241 6.3E-58 T 15-10-2018 AM378_08665 275d6f6e72b8dae36b6449c52b8a698e 252 Pfam PF00005 ABC transporter 20 149 1.3E-29 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM378_15115 bc8bdd33388424268993c20249b9ba98 332 Gene3D G3DSA:3.30.60.50 165 220 8.9E-110 T 15-10-2018 AM378_15115 bc8bdd33388424268993c20249b9ba98 332 Gene3D G3DSA:1.10.1530.10 5 64 8.9E-110 T 15-10-2018 AM378_15115 bc8bdd33388424268993c20249b9ba98 332 Pfam PF02615 Malate/L-lactate dehydrogenase 3 330 4.9E-102 T 15-10-2018 IPR003767 Malate/L-lactate dehydrogenase-like GO:0016491|GO:0055114 AM378_15115 bc8bdd33388424268993c20249b9ba98 332 Gene3D G3DSA:3.30.1370.60 65 270 8.9E-110 T 15-10-2018 AM378_15115 bc8bdd33388424268993c20249b9ba98 332 Hamap MF_00820 2,3-diketo-L-gulonate reductase [dlgD]. 1 332 73.583 T 15-10-2018 IPR023689 2,3-diketo-L-gulonate reductase GO:0016616|GO:0047559|GO:0055114|GO:0070403 KEGG: 00040+1.1.1.130|KEGG: 00053+1.1.1.130|MetaCyc: PWY-6961 AM378_15115 bc8bdd33388424268993c20249b9ba98 332 SUPERFAMILY SSF89733 1 332 7.06E-95 T 15-10-2018 IPR036111 Malate/L-sulfolactate/L-lactate dehydrogenase-like superfamily GO:0016491|GO:0055114 AM378_22760 91388c149bd6318af04aab6af9ef2e4c 27 Pfam PF08054 Leucine operon leader peptide 1 25 9.5E-8 T 15-10-2018 IPR012570 Leucine operon leader peptide GO:0009098 AM378_21835 87dd5091c595708e13c1a4fcafe7d8d9 726 Pfam PF02554 Carbon starvation protein CstA 34 405 4.7E-161 T 15-10-2018 IPR003706 CstA, N-terminal domain GO:0009267|GO:0016020 AM378_21835 87dd5091c595708e13c1a4fcafe7d8d9 726 Pfam PF13722 5TM C-terminal transporter carbon starvation CstA 486 614 1.2E-33 T 15-10-2018 IPR025299 CstA, C-terminal domain AM378_14405 fe3a10b736490f7d7f250380c4a1223b 305 Gene3D G3DSA:1.10.10.10 7 96 1.0E-24 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_14405 fe3a10b736490f7d7f250380c4a1223b 305 SUPERFAMILY SSF53850 93 296 2.33E-41 T 15-10-2018 AM378_14405 fe3a10b736490f7d7f250380c4a1223b 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 67 1.7E-21 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_14405 fe3a10b736490f7d7f250380c4a1223b 305 SUPERFAMILY SSF46785 3 87 2.2E-24 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM378_14405 fe3a10b736490f7d7f250380c4a1223b 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 4.6E-10 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_14405 fe3a10b736490f7d7f250380c4a1223b 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 4.6E-10 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_14405 fe3a10b736490f7d7f250380c4a1223b 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 4.6E-10 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_14405 fe3a10b736490f7d7f250380c4a1223b 305 Gene3D G3DSA:3.40.190.10 163 262 2.6E-61 T 15-10-2018 AM378_14405 fe3a10b736490f7d7f250380c4a1223b 305 Pfam PF03466 LysR substrate binding domain 91 292 2.9E-40 T 15-10-2018 IPR005119 LysR, substrate-binding AM378_14405 fe3a10b736490f7d7f250380c4a1223b 305 Gene3D G3DSA:3.40.190.10 103 288 2.6E-61 T 15-10-2018 AM378_11125 0376e97a4d0a36ee3fd6e9c5be41a0d7 359 Pfam PF03739 Predicted permease YjgP/YjgQ family 6 354 7.1E-58 T 15-10-2018 IPR005495 Permease LptG/LptF-related GO:0016021 AM378_11125 0376e97a4d0a36ee3fd6e9c5be41a0d7 359 TIGRFAM TIGR04408 LptG_lptG: LPS export ABC transporter permease LptG 3 354 3.6E-89 T 15-10-2018 IPR030923 LPS export ABC transporter permease LptG GO:0043190|GO:0055085 AM378_03645 0c9d825f34d558ac39c4fa8227280e56 182 PIRSF PIRSF010252 1 178 9.1E-64 T 15-10-2018 IPR009809 Cell division protein ZapC AM378_03645 0c9d825f34d558ac39c4fa8227280e56 182 Pfam PF07126 Cell-division protein ZapC 2 170 2.9E-72 T 15-10-2018 IPR009809 Cell division protein ZapC AM378_03645 0c9d825f34d558ac39c4fa8227280e56 182 Hamap MF_00906 Cell division protein ZapC [zapC]. 2 178 40.735 T 15-10-2018 IPR009809 Cell division protein ZapC AM378_17815 659ce8326059a95b33588c3cf738aff0 336 SUPERFAMILY SSF110997 251 316 1.96E-5 T 15-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 AM378_17815 659ce8326059a95b33588c3cf738aff0 336 Gene3D G3DSA:3.30.70.1070 232 335 3.3E-33 T 15-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 AM378_17815 659ce8326059a95b33588c3cf738aff0 336 Pfam PF05036 Sporulation related domain 252 325 3.1E-11 T 15-10-2018 IPR007730 Sporulation-like domain GO:0042834 AM378_17815 659ce8326059a95b33588c3cf738aff0 336 Hamap MF_02021 Cell division protein DamX [damX]. 1 336 27.13 T 15-10-2018 IPR032899 Cell division protein DamX GO:0030428|GO:0032506 AM378_09450 9a38047dc5f0bdf49593c8857d952e29 71 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 31 64 3.1E-11 T 15-10-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 AM378_09450 9a38047dc5f0bdf49593c8857d952e29 71 TIGRFAM TIGR02419 C4_traR_proteo: phage/conjugal plasmid C-4 type zinc finger protein, TraR family 3 63 4.8E-19 T 15-10-2018 IPR012783 Zinc finger, C4 DksA/TraR-type AM378_09450 9a38047dc5f0bdf49593c8857d952e29 71 SUPERFAMILY SSF57716 33 70 1.71E-7 T 15-10-2018 AM378_09450 9a38047dc5f0bdf49593c8857d952e29 71 Gene3D G3DSA:1.20.120.910 3 69 3.2E-17 T 15-10-2018 AM378_21145 d275837a4fbed9679e2fa7151e6f446a 223 Pfam PF08525 Opacity-associated protein A N-terminal motif 72 99 3.3E-9 T 15-10-2018 IPR013731 Opacity-associated protein A, N-terminal AM378_21145 d275837a4fbed9679e2fa7151e6f446a 223 Gene3D G3DSA:3.10.450.350 126 221 4.8E-13 T 15-10-2018 AM378_21145 d275837a4fbed9679e2fa7151e6f446a 223 Pfam PF04225 Opacity-associated protein A LysM-like domain 138 223 2.4E-33 T 15-10-2018 IPR007340 Opacity-associated protein A AM378_18255 1a973a388009520804e965a69e2c5467 1024 Pfam PF00501 AMP-binding enzyme 14 409 1.0E-75 T 15-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 AM378_18255 1a973a388009520804e965a69e2c5467 1024 SUPERFAMILY SSF56801 9 533 3.92E-120 T 15-10-2018 AM378_18255 1a973a388009520804e965a69e2c5467 1024 Pfam PF13193 AMP-binding enzyme C-terminal domain 418 493 1.6E-6 T 15-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain AM378_18255 1a973a388009520804e965a69e2c5467 1024 SUPERFAMILY SSF52777 791 1022 1.45E-32 T 15-10-2018 AM378_18255 1a973a388009520804e965a69e2c5467 1024 SUPERFAMILY SSF47336 515 581 7.85E-13 T 15-10-2018 IPR036736 ACP-like superfamily AM378_18255 1a973a388009520804e965a69e2c5467 1024 Gene3D G3DSA:1.10.1200.10 513 586 3.0E-14 T 15-10-2018 IPR036736 ACP-like superfamily AM378_18255 1a973a388009520804e965a69e2c5467 1024 Gene3D G3DSA:3.30.559.10 607 975 1.7E-59 T 15-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 AM378_18255 1a973a388009520804e965a69e2c5467 1024 ProSitePatterns PS00455 Putative AMP-binding domain signature. 154 165 - T 15-10-2018 IPR020845 AMP-binding, conserved site AM378_18255 1a973a388009520804e965a69e2c5467 1024 Pfam PF00550 Phosphopantetheine attachment site 523 579 1.2E-6 T 15-10-2018 IPR009081 Phosphopantetheine binding ACP domain AM378_18255 1a973a388009520804e965a69e2c5467 1024 Gene3D G3DSA:3.40.50.12780 7 403 3.2E-96 T 15-10-2018 AM378_18255 1a973a388009520804e965a69e2c5467 1024 Gene3D G3DSA:3.30.300.30 404 509 2.1E-26 T 15-10-2018 AM378_18255 1a973a388009520804e965a69e2c5467 1024 SUPERFAMILY SSF52777 608 784 7.26E-21 T 15-10-2018 AM378_18255 1a973a388009520804e965a69e2c5467 1024 Pfam PF00668 Condensation domain 608 1021 7.9E-43 T 15-10-2018 IPR001242 Condensation domain AM378_18255 1a973a388009520804e965a69e2c5467 1024 Gene3D G3DSA:3.30.559.30 788 1022 1.7E-59 T 15-10-2018 AM378_01650 e269a6cd7251020ff88831b28738f109 349 Gene3D G3DSA:3.40.50.1980 187 344 2.8E-59 T 15-10-2018 AM378_01650 e269a6cd7251020ff88831b28738f109 349 SUPERFAMILY SSF53807 23 323 7.85E-55 T 15-10-2018 AM378_01650 e269a6cd7251020ff88831b28738f109 349 Gene3D G3DSA:3.40.50.1980 22 185 5.2E-40 T 15-10-2018 AM378_01650 e269a6cd7251020ff88831b28738f109 349 Pfam PF01497 Periplasmic binding protein 55 295 1.6E-28 T 15-10-2018 IPR002491 ABC transporter periplasmic binding domain AM378_24055 c232643c609fc10f322825ef658cf916 317 PIRSF PIRSF018266 1 316 1.3E-72 T 15-10-2018 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component AM378_24055 c232643c609fc10f322825ef658cf916 317 Gene3D G3DSA:2.60.120.1440 108 242 2.1E-22 T 15-10-2018 AM378_24055 c232643c609fc10f322825ef658cf916 317 Pfam PF04773 FecR protein 112 206 3.2E-16 T 15-10-2018 IPR006860 FecR protein AM378_24055 c232643c609fc10f322825ef658cf916 317 Pfam PF16220 Domain of unknown function (DUF4880) 10 51 3.9E-9 T 15-10-2018 IPR032623 FecR, N-terminal AM378_19070 07d4d4e3a1ce7195085e46d206aa44b6 315 Pfam PF00583 Acetyltransferase (GNAT) family 21 122 1.0E-13 T 15-10-2018 IPR000182 GNAT domain AM378_19070 07d4d4e3a1ce7195085e46d206aa44b6 315 Gene3D G3DSA:3.10.129.10 148 299 2.3E-44 T 15-10-2018 AM378_19070 07d4d4e3a1ce7195085e46d206aa44b6 315 SUPERFAMILY SSF55729 2 146 3.38E-27 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase AM378_19070 07d4d4e3a1ce7195085e46d206aa44b6 315 Pfam PF09500 Putative thioesterase (yiiD_Cterm) 158 297 7.3E-49 T 15-10-2018 IPR012660 Thioesterase, putative AM378_19070 07d4d4e3a1ce7195085e46d206aa44b6 315 Gene3D G3DSA:3.40.630.30 3 145 7.9E-25 T 15-10-2018 AM378_19070 07d4d4e3a1ce7195085e46d206aa44b6 315 TIGRFAM TIGR02447 yiiD_Cterm: putative thioesterase domain 165 298 2.8E-47 T 15-10-2018 IPR012660 Thioesterase, putative AM378_19070 07d4d4e3a1ce7195085e46d206aa44b6 315 SUPERFAMILY SSF54637 155 297 1.53E-42 T 15-10-2018 IPR029069 HotDog domain superfamily AM378_23790 7c6a9715fa7d963fa073e5e62e4567d5 294 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 66 8.1E-22 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_23790 7c6a9715fa7d963fa073e5e62e4567d5 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 1.6E-8 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_23790 7c6a9715fa7d963fa073e5e62e4567d5 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 1.6E-8 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_23790 7c6a9715fa7d963fa073e5e62e4567d5 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 1.6E-8 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_23790 7c6a9715fa7d963fa073e5e62e4567d5 294 Pfam PF03466 LysR substrate binding domain 91 292 7.8E-35 T 15-10-2018 IPR005119 LysR, substrate-binding AM378_23790 7c6a9715fa7d963fa073e5e62e4567d5 294 Gene3D G3DSA:3.40.190.290 94 293 4.2E-48 T 15-10-2018 AM378_23790 7c6a9715fa7d963fa073e5e62e4567d5 294 SUPERFAMILY SSF46785 6 90 1.36E-21 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM378_23790 7c6a9715fa7d963fa073e5e62e4567d5 294 SUPERFAMILY SSF53850 92 293 6.33E-39 T 15-10-2018 AM378_23790 7c6a9715fa7d963fa073e5e62e4567d5 294 Gene3D G3DSA:1.10.10.10 6 90 5.6E-26 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_00260 97b512a00c57f43f859fb41456844f12 109 TIGRFAM TIGR00103 DNA_YbaB_EbfC: DNA-binding protein, YbaB/EbfC family 1 105 5.6E-42 T 15-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family AM378_00260 97b512a00c57f43f859fb41456844f12 109 Pfam PF02575 YbaB/EbfC DNA-binding family 11 99 5.8E-35 T 15-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family AM378_00260 97b512a00c57f43f859fb41456844f12 109 PIRSF PIRSF004555 3 109 6.1E-39 T 15-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family AM378_00260 97b512a00c57f43f859fb41456844f12 109 SUPERFAMILY SSF82607 11 103 4.05E-36 T 15-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily AM378_00260 97b512a00c57f43f859fb41456844f12 109 Hamap MF_00274 Nucleoid-associated protein YbaB [ybaB]. 5 98 23.277 T 15-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family AM378_00260 97b512a00c57f43f859fb41456844f12 109 Gene3D G3DSA:3.30.1310.10 1 109 2.3E-48 T 15-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily AM378_02890 c8ee99355bbc79ceea669d5f7f8b4976 258 Gene3D G3DSA:3.20.20.70 1 258 8.9E-94 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM378_02890 c8ee99355bbc79ceea669d5f7f8b4976 258 Pfam PF00977 Histidine biosynthesis protein 5 239 8.8E-79 T 15-10-2018 IPR006062 Histidine biosynthesis GO:0000105 AM378_02890 c8ee99355bbc79ceea669d5f7f8b4976 258 Hamap MF_01013 Imidazole glycerol phosphate synthase subunit HisF [hisF]. 1 256 45.128 T 15-10-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 AM378_02890 c8ee99355bbc79ceea669d5f7f8b4976 258 TIGRFAM TIGR00735 hisF: imidazoleglycerol phosphate synthase, cyclase subunit 1 256 2.4E-117 T 15-10-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 AM378_02890 c8ee99355bbc79ceea669d5f7f8b4976 258 SUPERFAMILY SSF51366 1 257 1.02E-74 T 15-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 AM378_03405 7660db39f5641630960e8c4cf812c016 323 Gene3D G3DSA:3.50.50.60 9 312 1.3E-128 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AM378_03405 7660db39f5641630960e8c4cf812c016 323 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 1.4E-40 T 15-10-2018 AM378_03405 7660db39f5641630960e8c4cf812c016 323 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 237 253 1.4E-40 T 15-10-2018 AM378_03405 7660db39f5641630960e8c4cf812c016 323 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 148 166 1.4E-40 T 15-10-2018 AM378_03405 7660db39f5641630960e8c4cf812c016 323 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 267 289 1.4E-40 T 15-10-2018 AM378_03405 7660db39f5641630960e8c4cf812c016 323 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 106 124 1.4E-40 T 15-10-2018 AM378_03405 7660db39f5641630960e8c4cf812c016 323 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 8 301 2.9E-48 T 15-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM378_03405 7660db39f5641630960e8c4cf812c016 323 Gene3D G3DSA:3.50.50.60 118 245 1.3E-128 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AM378_03405 7660db39f5641630960e8c4cf812c016 323 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 136 156 - T 15-10-2018 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 AM378_03405 7660db39f5641630960e8c4cf812c016 323 SUPERFAMILY SSF51905 3 315 7.08E-55 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AM378_03405 7660db39f5641630960e8c4cf812c016 323 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 8 30 6.8E-77 T 15-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AM378_03405 7660db39f5641630960e8c4cf812c016 323 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 239 260 6.8E-77 T 15-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AM378_03405 7660db39f5641630960e8c4cf812c016 323 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 62 72 6.8E-77 T 15-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AM378_03405 7660db39f5641630960e8c4cf812c016 323 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 144 168 6.8E-77 T 15-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AM378_03405 7660db39f5641630960e8c4cf812c016 323 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 199 215 6.8E-77 T 15-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AM378_03405 7660db39f5641630960e8c4cf812c016 323 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 129 141 6.8E-77 T 15-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AM378_03405 7660db39f5641630960e8c4cf812c016 323 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 41 56 6.8E-77 T 15-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AM378_03405 7660db39f5641630960e8c4cf812c016 323 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 107 115 6.8E-77 T 15-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AM378_03405 7660db39f5641630960e8c4cf812c016 323 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 277 295 6.8E-77 T 15-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AM378_03405 7660db39f5641630960e8c4cf812c016 323 TIGRFAM TIGR01292 TRX_reduct: thioredoxin-disulfide reductase 8 314 1.5E-123 T 15-10-2018 IPR005982 Thioredoxin reductase GO:0004791|GO:0005737|GO:0019430|GO:0055114 KEGG: 00450+1.8.1.9 AM378_01970 c925da0df5190effb0b258c5d4bf7e85 479 Pfam PF00155 Aminotransferase class I and II 106 461 2.0E-38 T 15-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AM378_01970 c925da0df5190effb0b258c5d4bf7e85 479 Pfam PF00392 Bacterial regulatory proteins, gntR family 4 66 6.3E-16 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM378_01970 c925da0df5190effb0b258c5d4bf7e85 479 SUPERFAMILY SSF53383 80 467 4.4E-98 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM378_01970 c925da0df5190effb0b258c5d4bf7e85 479 SUPERFAMILY SSF46785 1 70 5.44E-19 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM378_01970 c925da0df5190effb0b258c5d4bf7e85 479 Gene3D G3DSA:3.40.640.10 141 359 1.8E-100 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AM378_01970 c925da0df5190effb0b258c5d4bf7e85 479 SMART SM00345 7 66 6.0E-22 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM378_01970 c925da0df5190effb0b258c5d4bf7e85 479 Gene3D G3DSA:1.10.10.10 1 68 1.5E-20 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_01970 c925da0df5190effb0b258c5d4bf7e85 479 Gene3D G3DSA:3.90.1150.10 96 464 1.8E-100 T 15-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AM378_19365 d2b672147737b2ae129df44ee28f7edf 222 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 53 182 7.8E-14 T 15-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AM378_19365 d2b672147737b2ae129df44ee28f7edf 222 SUPERFAMILY SSF56784 4 212 7.58E-48 T 15-10-2018 IPR036412 HAD-like superfamily AM378_19365 d2b672147737b2ae129df44ee28f7edf 222 Gene3D G3DSA:3.40.50.1000 7 192 4.4E-46 T 15-10-2018 IPR023214 HAD superfamily AM378_19365 d2b672147737b2ae129df44ee28f7edf 222 Pfam PF13419 Haloacid dehalogenase-like hydrolase 7 183 1.2E-23 T 15-10-2018 AM378_19365 d2b672147737b2ae129df44ee28f7edf 222 Gene3D G3DSA:1.10.150.240 19 86 4.4E-46 T 15-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 AM378_05040 37b18f0a3c864a15c2111b94bb29d1b2 149 SUPERFAMILY SSF52402 2 145 4.69E-31 T 15-10-2018 AM378_05040 37b18f0a3c864a15c2111b94bb29d1b2 149 PRINTS PR01438 Universal stress protein signature 2 20 7.5E-14 T 15-10-2018 IPR006015 Universal stress protein A AM378_05040 37b18f0a3c864a15c2111b94bb29d1b2 149 PRINTS PR01438 Universal stress protein signature 105 117 7.5E-14 T 15-10-2018 IPR006015 Universal stress protein A AM378_05040 37b18f0a3c864a15c2111b94bb29d1b2 149 PRINTS PR01438 Universal stress protein signature 122 144 7.5E-14 T 15-10-2018 IPR006015 Universal stress protein A AM378_05040 37b18f0a3c864a15c2111b94bb29d1b2 149 Pfam PF00582 Universal stress protein family 1 144 1.5E-26 T 15-10-2018 IPR006016 UspA AM378_05040 37b18f0a3c864a15c2111b94bb29d1b2 149 Gene3D G3DSA:3.40.50.620 1 144 8.1E-38 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM378_24295 39a640df53883bd3c6023adc072d146c 200 Pfam PF01965 DJ-1/PfpI family 4 170 2.1E-43 T 15-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 AM378_24295 39a640df53883bd3c6023adc072d146c 200 TIGRFAM TIGR01383 not_thiJ: DJ-1 family protein 5 183 1.9E-62 T 15-10-2018 IPR006287 Protein/nucleic acid deglycase DJ-1 Reactome: R-HSA-3899300 AM378_24295 39a640df53883bd3c6023adc072d146c 200 Gene3D G3DSA:3.40.50.880 1 196 1.7E-53 T 15-10-2018 IPR029062 Class I glutamine amidotransferase-like AM378_24295 39a640df53883bd3c6023adc072d146c 200 SUPERFAMILY SSF52317 5 189 1.34E-45 T 15-10-2018 IPR029062 Class I glutamine amidotransferase-like AM378_16715 3a2ec55a274b50b4764202edcc9080d5 98 Pfam PF14189 Domain of unknown function (DUF4312) 6 88 7.8E-37 T 15-10-2018 IPR020037 Protein of unknown function DUF4312 AM378_16715 3a2ec55a274b50b4764202edcc9080d5 98 TIGRFAM TIGR03578 EF_0831: conserved hypothetical protein EF_0831/AHA_3912 2 96 5.6E-38 T 15-10-2018 IPR020037 Protein of unknown function DUF4312 AM378_01305 d7147e5212a351e9192f57ae7f5d29c3 424 PIRSF PIRSF000521 28 139 3.2E-7 T 15-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AM378_01305 d7147e5212a351e9192f57ae7f5d29c3 424 PIRSF PIRSF000521 128 422 6.7E-25 T 15-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AM378_01305 d7147e5212a351e9192f57ae7f5d29c3 424 Pfam PF00202 Aminotransferase class-III 29 419 2.6E-130 T 15-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AM378_01305 d7147e5212a351e9192f57ae7f5d29c3 424 TIGRFAM TIGR00508 bioA: adenosylmethionine-8-amino-7-oxononanoate transaminase 15 422 1.4E-185 T 15-10-2018 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62 AM378_01305 d7147e5212a351e9192f57ae7f5d29c3 424 Hamap MF_00834 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [bioA]. 3 424 50.951 T 15-10-2018 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62 AM378_01305 d7147e5212a351e9192f57ae7f5d29c3 424 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 244 281 - T 15-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AM378_01305 d7147e5212a351e9192f57ae7f5d29c3 424 Gene3D G3DSA:3.40.640.10 63 332 8.5E-177 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AM378_01305 d7147e5212a351e9192f57ae7f5d29c3 424 Gene3D G3DSA:3.90.1150.10 12 417 8.5E-177 T 15-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AM378_01305 d7147e5212a351e9192f57ae7f5d29c3 424 SUPERFAMILY SSF53383 5 422 3.58E-137 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM378_23655 85764e92375d0bee077ce4bb307fa108 396 Gene3D G3DSA:1.10.150.130 93 203 1.6E-32 T 15-10-2018 IPR010998 Integrase/recombinase, N-terminal AM378_23655 85764e92375d0bee077ce4bb307fa108 396 SUPERFAMILY SSF56349 98 380 2.59E-63 T 15-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AM378_23655 85764e92375d0bee077ce4bb307fa108 396 Gene3D G3DSA:1.10.443.10 204 380 1.2E-16 T 15-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 AM378_23655 85764e92375d0bee077ce4bb307fa108 396 Gene3D G3DSA:3.30.160.390 1 88 1.7E-32 T 15-10-2018 IPR038488 Integrase, DNA-binding domain superfamily AM378_23655 85764e92375d0bee077ce4bb307fa108 396 Pfam PF00589 Phage integrase family 207 370 5.1E-20 T 15-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AM378_23655 85764e92375d0bee077ce4bb307fa108 396 Pfam PF13356 Arm DNA-binding domain 3 87 2.0E-18 T 15-10-2018 IPR025166 Integrase, DNA-binding domain AM378_08900 fc79c025ee5a847d5bbf4df1bb1a6869 272 Gene3D G3DSA:3.40.50.150 1 272 5.2E-82 T 15-10-2018 AM378_08900 fc79c025ee5a847d5bbf4df1bb1a6869 272 SUPERFAMILY SSF53335 4 252 6.47E-43 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM378_08900 fc79c025ee5a847d5bbf4df1bb1a6869 272 PIRSF PIRSF018249 1 271 3.7E-87 T 15-10-2018 IPR016718 rRNA (guanine-N1-)-methyltransferase A, predicted GO:0008168 AM378_08900 fc79c025ee5a847d5bbf4df1bb1a6869 272 Pfam PF13847 Methyltransferase domain 88 201 4.1E-14 T 15-10-2018 IPR025714 Methyltransferase domain AM378_19735 350d4522271304605a30cbf35e759209 284 Gene3D G3DSA:3.40.190.10 99 263 8.8E-44 T 15-10-2018 AM378_19735 350d4522271304605a30cbf35e759209 284 Gene3D G3DSA:3.40.190.10 163 256 8.8E-44 T 15-10-2018 AM378_19735 350d4522271304605a30cbf35e759209 284 Gene3D G3DSA:1.10.10.10 4 89 1.1E-25 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_19735 350d4522271304605a30cbf35e759209 284 SUPERFAMILY SSF46785 4 107 2.27E-26 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM378_19735 350d4522271304605a30cbf35e759209 284 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 24 35 4.3E-10 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_19735 350d4522271304605a30cbf35e759209 284 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 45 56 4.3E-10 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_19735 350d4522271304605a30cbf35e759209 284 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 35 45 4.3E-10 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_19735 350d4522271304605a30cbf35e759209 284 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 67 2.0E-21 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_19735 350d4522271304605a30cbf35e759209 284 SUPERFAMILY SSF53850 95 267 1.52E-19 T 15-10-2018 AM378_19735 350d4522271304605a30cbf35e759209 284 Pfam PF03466 LysR substrate binding domain 94 269 2.2E-19 T 15-10-2018 IPR005119 LysR, substrate-binding AM378_00390 84d56f342490faed36eba5d67e6be88c 153 Pfam PF01957 NfeD-like C-terminal, partner-binding 13 149 2.5E-27 T 15-10-2018 IPR002810 NfeD-like, C-terminal domain AM378_00390 84d56f342490faed36eba5d67e6be88c 153 Gene3D G3DSA:2.40.50.140 94 150 7.9E-14 T 15-10-2018 AM378_00390 84d56f342490faed36eba5d67e6be88c 153 SUPERFAMILY SSF141322 94 151 2.88E-7 T 15-10-2018 AM378_12625 f75c8f4783ffbe5064a62ba95d41429a 291 Gene3D G3DSA:1.10.3720.10 20 279 4.9E-61 T 15-10-2018 IPR035906 MetI-like superfamily AM378_12625 f75c8f4783ffbe5064a62ba95d41429a 291 TIGRFAM TIGR00969 3a0106s02: sulfate ABC transporter, permease protein 14 275 2.7E-109 T 15-10-2018 IPR005667 Sulphate ABC transporter permease protein 2 GO:0008272|GO:0015419|GO:0016020 AM378_12625 f75c8f4783ffbe5064a62ba95d41429a 291 SUPERFAMILY SSF161098 16 268 1.83E-52 T 15-10-2018 IPR035906 MetI-like superfamily AM378_12625 f75c8f4783ffbe5064a62ba95d41429a 291 TIGRFAM TIGR02140 permease_CysW: sulfate ABC transporter, permease protein CysW 19 277 5.3E-114 T 15-10-2018 IPR011866 Sulphate ABC transporter, permease protein CysW GO:0008272|GO:0015116|GO:0016021 AM378_12625 f75c8f4783ffbe5064a62ba95d41429a 291 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 81 274 2.3E-14 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AM378_07960 893f7f14432b92277648a45cce6fb090 390 SUPERFAMILY SSF48452 110 262 2.62E-14 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AM378_07960 893f7f14432b92277648a45cce6fb090 390 Hamap MF_00994 Lipopolysaccharide assembly protein B [lapB]. 4 388 36.48 T 15-10-2018 IPR030865 Lipopolysaccharide assembly protein B GO:0008653 AM378_07960 893f7f14432b92277648a45cce6fb090 390 SUPERFAMILY SSF48452 42 132 2.66E-5 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AM378_07960 893f7f14432b92277648a45cce6fb090 390 Pfam PF13432 Tetratricopeptide repeat 113 169 0.0079 T 15-10-2018 AM378_07960 893f7f14432b92277648a45cce6fb090 390 Gene3D G3DSA:1.25.40.10 109 290 1.2E-17 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AM378_07960 893f7f14432b92277648a45cce6fb090 390 SMART SM00028 180 213 270.0 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AM378_07960 893f7f14432b92277648a45cce6fb090 390 SMART SM00028 69 102 64.0 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AM378_07960 893f7f14432b92277648a45cce6fb090 390 SMART SM00028 214 247 0.095 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AM378_07960 893f7f14432b92277648a45cce6fb090 390 SMART SM00028 107 140 390.0 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AM378_07960 893f7f14432b92277648a45cce6fb090 390 SMART SM00028 141 174 360.0 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AM378_07960 893f7f14432b92277648a45cce6fb090 390 Pfam PF13176 Tetratricopeptide repeat 71 97 0.028 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AM378_07960 893f7f14432b92277648a45cce6fb090 390 Gene3D G3DSA:1.25.40.10 12 100 4.0E-6 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AM378_07960 893f7f14432b92277648a45cce6fb090 390 Pfam PF14559 Tetratricopeptide repeat 191 246 1.5E-7 T 15-10-2018 AM378_02730 f64aabeafd5f5dcfb42c9e523ee9c5f8 715 Gene3D G3DSA:3.40.50.300 440 715 5.3E-78 T 15-10-2018 AM378_02730 f64aabeafd5f5dcfb42c9e523ee9c5f8 715 Pfam PF13614 AAA domain 539 677 1.9E-13 T 15-10-2018 IPR025669 AAA domain AM378_02730 f64aabeafd5f5dcfb42c9e523ee9c5f8 715 SUPERFAMILY SSF52540 527 706 8.51E-36 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_02730 f64aabeafd5f5dcfb42c9e523ee9c5f8 715 Pfam PF02706 Chain length determinant protein 16 107 5.3E-25 T 15-10-2018 IPR003856 Polysaccharide chain length determinant N-terminal domain GO:0009103|GO:0016020 AM378_02730 f64aabeafd5f5dcfb42c9e523ee9c5f8 715 TIGRFAM TIGR01007 eps_fam: capsular exopolysaccharide family 509 712 8.1E-51 T 15-10-2018 IPR005702 Exopolysaccharide synthesis protein GO:0045226 AM378_02730 f64aabeafd5f5dcfb42c9e523ee9c5f8 715 Pfam PF13807 G-rich domain on putative tyrosine kinase 367 448 2.3E-34 T 15-10-2018 IPR032807 Tyrosine kinase, G-rich domain AM378_10165 61a6ccdaa916ea3ff62ece79cad8c5fa 427 Pfam PF02040 Arsenical pump membrane protein 5 423 4.4E-158 T 15-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 AM378_10165 61a6ccdaa916ea3ff62ece79cad8c5fa 427 PRINTS PR00758 Arsenical pump membrane protein signature 144 168 1.5E-120 T 15-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 AM378_10165 61a6ccdaa916ea3ff62ece79cad8c5fa 427 PRINTS PR00758 Arsenical pump membrane protein signature 278 302 1.5E-120 T 15-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 AM378_10165 61a6ccdaa916ea3ff62ece79cad8c5fa 427 PRINTS PR00758 Arsenical pump membrane protein signature 397 421 1.5E-120 T 15-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 AM378_10165 61a6ccdaa916ea3ff62ece79cad8c5fa 427 PRINTS PR00758 Arsenical pump membrane protein signature 364 389 1.5E-120 T 15-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 AM378_10165 61a6ccdaa916ea3ff62ece79cad8c5fa 427 PRINTS PR00758 Arsenical pump membrane protein signature 101 125 1.5E-120 T 15-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 AM378_10165 61a6ccdaa916ea3ff62ece79cad8c5fa 427 PRINTS PR00758 Arsenical pump membrane protein signature 177 200 1.5E-120 T 15-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 AM378_10165 61a6ccdaa916ea3ff62ece79cad8c5fa 427 PRINTS PR00758 Arsenical pump membrane protein signature 217 242 1.5E-120 T 15-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 AM378_10165 61a6ccdaa916ea3ff62ece79cad8c5fa 427 PRINTS PR00758 Arsenical pump membrane protein signature 323 345 1.5E-120 T 15-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 AM378_10165 61a6ccdaa916ea3ff62ece79cad8c5fa 427 TIGRFAM TIGR00935 2a45: arsenite/antimonite efflux pump membrane protein 2 427 1.3E-214 T 15-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 AM378_19615 310e8cea11271069db08181804e3a93b 259 Pfam PF08241 Methyltransferase domain 52 139 9.2E-21 T 15-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 AM378_19615 310e8cea11271069db08181804e3a93b 259 SUPERFAMILY SSF53335 12 242 4.18E-41 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM378_19615 310e8cea11271069db08181804e3a93b 259 Gene3D G3DSA:3.40.50.150 14 251 4.6E-44 T 15-10-2018 AM378_07035 1c81fcaf2e837efae488712f14bd3d57 141 PIRSF PIRSF029509 1 140 3.6E-41 T 15-10-2018 IPR016923 Uncharacterised conserved protein UCP029509, membrane AM378_09740 2dd63248c5a27866114643536a464522 103 SUPERFAMILY SSF101498 3 90 3.27E-12 T 15-10-2018 IPR035890 Anti-sigma-28 factor FlgM superfamily AM378_09740 2dd63248c5a27866114643536a464522 103 Pfam PF04316 Anti-sigma-28 factor, FlgM 37 90 3.4E-11 T 15-10-2018 IPR031316 Anti-sigma-28 factor FlgM, C-terminal AM378_09740 2dd63248c5a27866114643536a464522 103 TIGRFAM TIGR03824 FlgM_jcvi: flagellar biosynthesis anti-sigma factor FlgM 1 92 8.8E-20 T 15-10-2018 IPR007412 Anti-sigma-28 factor, FlgM GO:0045892 AM378_19925 2662740dc72dc4a7aa9654e83bc1d9ae 246 SUPERFAMILY SSF52540 1 236 6.13E-28 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_19925 2662740dc72dc4a7aa9654e83bc1d9ae 246 TIGRFAM TIGR03371 cellulose_yhjQ: cellulose synthase operon protein YhjQ 1 240 2.3E-80 T 15-10-2018 IPR017746 Cellulose synthase operon protein BcsQ AM378_19925 2662740dc72dc4a7aa9654e83bc1d9ae 246 Pfam PF06564 Cellulose biosynthesis protein BcsQ 1 237 2.0E-105 T 15-10-2018 IPR017746 Cellulose synthase operon protein BcsQ AM378_19925 2662740dc72dc4a7aa9654e83bc1d9ae 246 Gene3D G3DSA:3.40.50.300 2 240 5.1E-28 T 15-10-2018 AM378_16825 76f1d27fc03e945bc30f0642f9e49ed8 560 Pfam PF15864 Protein glycosylation ligase 163 188 7.7E-9 T 15-10-2018 IPR031726 Protein glycosylation ligase domain AM378_16825 76f1d27fc03e945bc30f0642f9e49ed8 560 Pfam PF04932 O-Antigen ligase 206 352 2.2E-15 T 15-10-2018 IPR007016 O-antigen ligase-related AM378_16825 76f1d27fc03e945bc30f0642f9e49ed8 560 Pfam PF11846 Virulence factor membrane-bound polymerase, C-terminal 381 557 2.3E-18 T 15-10-2018 IPR021797 Virulence factor membrane-bound polymerase, C-terminal AM378_20405 edb28a6270d058f9f4cd592f14cefcef 314 Pfam PF03466 LysR substrate binding domain 86 288 1.4E-41 T 15-10-2018 IPR005119 LysR, substrate-binding AM378_20405 edb28a6270d058f9f4cd592f14cefcef 314 Gene3D G3DSA:3.40.190.10 90 286 9.5E-72 T 15-10-2018 AM378_20405 edb28a6270d058f9f4cd592f14cefcef 314 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 9.8E-16 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_20405 edb28a6270d058f9f4cd592f14cefcef 314 Gene3D G3DSA:1.10.10.10 1 89 2.7E-29 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_20405 edb28a6270d058f9f4cd592f14cefcef 314 SUPERFAMILY SSF53850 88 291 6.52E-39 T 15-10-2018 AM378_20405 edb28a6270d058f9f4cd592f14cefcef 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 2.9E-6 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_20405 edb28a6270d058f9f4cd592f14cefcef 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 2.9E-6 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_20405 edb28a6270d058f9f4cd592f14cefcef 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 2.9E-6 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_20405 edb28a6270d058f9f4cd592f14cefcef 314 SUPERFAMILY SSF46785 1 109 2.67E-20 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM378_20405 edb28a6270d058f9f4cd592f14cefcef 314 Gene3D G3DSA:3.40.190.10 160 263 9.5E-72 T 15-10-2018 AM378_14190 7c8305a22efe8609ffb822a1f75b67f4 87 Pfam PF07073 Modulator of Rho-dependent transcription termination (ROF) 9 83 1.6E-28 T 15-10-2018 IPR009778 Modulator of Rho-dependent transcription termination AM378_14190 7c8305a22efe8609ffb822a1f75b67f4 87 SUPERFAMILY SSF101744 1 84 1.36E-29 T 15-10-2018 IPR023534 Rof/RNase P-like Reactome: R-HSA-6784531 AM378_14190 7c8305a22efe8609ffb822a1f75b67f4 87 Gene3D G3DSA:2.30.30.400 10 86 9.4E-33 T 15-10-2018 IPR038626 Rof-like superfamily AM378_10980 b4552d8c2cc845d19755d30fd8a3dddc 396 Gene3D G3DSA:1.20.1250.20 8 383 2.4E-40 T 15-10-2018 AM378_10980 b4552d8c2cc845d19755d30fd8a3dddc 396 Hamap MF_00517 Probable sugar efflux transporter [sotB]. 1 390 29.159 T 15-10-2018 IPR023495 Sugar efflux transporter, putative AM378_10980 b4552d8c2cc845d19755d30fd8a3dddc 396 Pfam PF07690 Major Facilitator Superfamily 19 347 4.5E-32 T 15-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM378_10980 b4552d8c2cc845d19755d30fd8a3dddc 396 SUPERFAMILY SSF103473 5 388 2.35E-54 T 15-10-2018 IPR036259 MFS transporter superfamily AM378_03970 ffcec6a37e387c85b9ee714988348526 337 Gene3D G3DSA:1.10.1530.10 15 331 3.3E-97 T 15-10-2018 AM378_03970 ffcec6a37e387c85b9ee714988348526 337 SUPERFAMILY SSF89733 4 336 5.89E-100 T 15-10-2018 IPR036111 Malate/L-sulfolactate/L-lactate dehydrogenase-like superfamily GO:0016491|GO:0055114 AM378_03970 ffcec6a37e387c85b9ee714988348526 337 Pfam PF02615 Malate/L-lactate dehydrogenase 8 332 7.5E-101 T 15-10-2018 IPR003767 Malate/L-lactate dehydrogenase-like GO:0016491|GO:0055114 AM378_03970 ffcec6a37e387c85b9ee714988348526 337 Gene3D G3DSA:3.30.1370.60 65 305 3.3E-97 T 15-10-2018 AM378_03970 ffcec6a37e387c85b9ee714988348526 337 Gene3D G3DSA:3.30.60.50 181 228 3.3E-97 T 15-10-2018 AM378_02680 f78f16ef4129e7f43d0e198c7248d1d0 209 Pfam PF01569 PAP2 superfamily 69 150 1.0E-10 T 15-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AM378_02680 f78f16ef4129e7f43d0e198c7248d1d0 209 SMART SM00014 17 144 0.0016 T 15-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AM378_02680 f78f16ef4129e7f43d0e198c7248d1d0 209 Gene3D G3DSA:1.20.144.10 69 159 7.8E-9 T 15-10-2018 AM378_02680 f78f16ef4129e7f43d0e198c7248d1d0 209 SUPERFAMILY SSF48317 4 149 8.76E-13 T 15-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily AM378_21775 adbe5b099b0e80497d8bb3fa474dc36f 372 SMART SM00507 286 345 1.1E-4 T 15-10-2018 IPR003615 HNH nuclease AM378_21775 adbe5b099b0e80497d8bb3fa474dc36f 372 Pfam PF01844 HNH endonuclease 299 349 4.4E-5 T 15-10-2018 IPR002711 HNH endonuclease GO:0003676|GO:0004519 AM378_10585 b4d0f132be2a6593785acfa02002acf4 384 Pfam PF02627 Carboxymuconolactone decarboxylase family 288 370 9.3E-25 T 15-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 AM378_10585 b4d0f132be2a6593785acfa02002acf4 384 TIGRFAM TIGR02425 decarb_PcaC: 4-carboxymuconolactone decarboxylase 256 376 2.2E-55 T 15-10-2018 IPR012788 4-carboxymuconolactone decarboxylase KEGG: 00362+4.1.1.44 AM378_10585 b4d0f132be2a6593785acfa02002acf4 384 TIGRFAM TIGR02427 protocat_pcaD: 3-oxoadipate enol-lactonase 2 249 5.1E-85 T 15-10-2018 IPR026968 3-oxoadipate enol-lactonase 1/2 GO:0042952|GO:0047570 KEGG: 00362+3.1.1.24|MetaCyc: PWY-6185 AM378_10585 b4d0f132be2a6593785acfa02002acf4 384 PRINTS PR00111 Alpha/beta hydrolase fold signature 196 210 1.8E-8 T 15-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AM378_10585 b4d0f132be2a6593785acfa02002acf4 384 PRINTS PR00111 Alpha/beta hydrolase fold signature 39 54 1.8E-8 T 15-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AM378_10585 b4d0f132be2a6593785acfa02002acf4 384 PRINTS PR00111 Alpha/beta hydrolase fold signature 97 110 1.8E-8 T 15-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AM378_10585 b4d0f132be2a6593785acfa02002acf4 384 PRINTS PR00111 Alpha/beta hydrolase fold signature 83 96 1.8E-8 T 15-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AM378_10585 b4d0f132be2a6593785acfa02002acf4 384 Pfam PF00561 alpha/beta hydrolase fold 14 171 1.9E-11 T 15-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AM378_10585 b4d0f132be2a6593785acfa02002acf4 384 SUPERFAMILY SSF53474 3 250 1.69E-57 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold AM378_10585 b4d0f132be2a6593785acfa02002acf4 384 SUPERFAMILY SSF69118 255 381 1.28E-38 T 15-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 AM378_10585 b4d0f132be2a6593785acfa02002acf4 384 Gene3D G3DSA:1.20.1290.10 256 380 1.4E-41 T 15-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 AM378_10585 b4d0f132be2a6593785acfa02002acf4 384 Gene3D G3DSA:3.40.50.1820 1 252 5.6E-62 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold AM378_20985 41f691cc95c50b06029b915722bfe1bc 349 Gene3D G3DSA:2.40.50.140 35 100 1.7E-25 T 15-10-2018 AM378_20985 41f691cc95c50b06029b915722bfe1bc 349 Gene3D G3DSA:1.10.40.50 275 349 2.4E-28 T 15-10-2018 AM378_20985 41f691cc95c50b06029b915722bfe1bc 349 SUPERFAMILY SSF52540 112 339 1.85E-55 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_20985 41f691cc95c50b06029b915722bfe1bc 349 Pfam PF03193 RsgA GTPase 98 275 4.0E-54 T 15-10-2018 IPR010914 RsgA GTPase domain GO:0003924|GO:0005525 AM378_20985 41f691cc95c50b06029b915722bfe1bc 349 TIGRFAM TIGR00157 TIGR00157: ribosome small subunit-dependent GTPase A 73 333 1.7E-91 T 15-10-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 AM378_20985 41f691cc95c50b06029b915722bfe1bc 349 Gene3D G3DSA:3.40.50.300 101 274 7.6E-48 T 15-10-2018 AM378_20985 41f691cc95c50b06029b915722bfe1bc 349 Hamap MF_01820 Small ribosomal subunit biogenesis GTPase RsgA [rsgA]. 40 339 37.076 T 15-10-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 AM378_23940 f90626e66362f9f5e00fab4f6bb4e28a 293 Pfam PF05726 Pirin C-terminal cupin domain 182 284 8.2E-29 T 15-10-2018 IPR008778 Pirin, C-terminal domain Reactome: R-HSA-8935690 AM378_23940 f90626e66362f9f5e00fab4f6bb4e28a 293 PIRSF PIRSF006232 1 291 2.9E-88 T 15-10-2018 IPR012093 Pirin Reactome: R-HSA-8935690 AM378_23940 f90626e66362f9f5e00fab4f6bb4e28a 293 Gene3D G3DSA:2.60.120.10 149 253 1.4E-84 T 15-10-2018 IPR014710 RmlC-like jelly roll fold AM378_23940 f90626e66362f9f5e00fab4f6bb4e28a 293 Gene3D G3DSA:2.60.120.10 17 279 1.4E-84 T 15-10-2018 IPR014710 RmlC-like jelly roll fold AM378_23940 f90626e66362f9f5e00fab4f6bb4e28a 293 SUPERFAMILY SSF51182 3 288 1.13E-83 T 15-10-2018 IPR011051 RmlC-like cupin domain superfamily AM378_23940 f90626e66362f9f5e00fab4f6bb4e28a 293 Pfam PF02678 Pirin 27 127 3.0E-33 T 15-10-2018 IPR003829 Pirin, N-terminal domain Reactome: R-HSA-8935690 AM378_23315 23de6486d3456ae1211d4b8f2459810a 182 Pfam PF01782 RimM N-terminal domain 16 96 6.4E-25 T 15-10-2018 IPR002676 RimM, N-terminal GO:0006364 AM378_23315 23de6486d3456ae1211d4b8f2459810a 182 Gene3D G3DSA:2.40.30.60 6 100 4.2E-34 T 15-10-2018 IPR036976 RimM, N-terminal domain superfamily GO:0006364 AM378_23315 23de6486d3456ae1211d4b8f2459810a 182 Pfam PF05239 PRC-barrel domain 104 174 6.6E-9 T 15-10-2018 IPR027275 PRC-barrel domain AM378_23315 23de6486d3456ae1211d4b8f2459810a 182 Gene3D G3DSA:2.30.30.240 101 182 5.0E-31 T 15-10-2018 AM378_23315 23de6486d3456ae1211d4b8f2459810a 182 SUPERFAMILY SSF50346 106 182 2.55E-19 T 15-10-2018 IPR011033 PRC-barrel-like superfamily AM378_23315 23de6486d3456ae1211d4b8f2459810a 182 SUPERFAMILY SSF50447 13 100 8.83E-24 T 15-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily AM378_23315 23de6486d3456ae1211d4b8f2459810a 182 Hamap MF_00014 Ribosome maturation factor RimM [rimM]. 13 182 24.08 T 15-10-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 AM378_23315 23de6486d3456ae1211d4b8f2459810a 182 TIGRFAM TIGR02273 16S_RimM: 16S rRNA processing protein RimM 14 182 1.1E-58 T 15-10-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 AM378_14990 915e1bca1525b12311f0e4684895cc5c 105 Pfam PF14384 BrnA antitoxin of type II toxin-antitoxin system 16 97 1.9E-15 T 15-10-2018 IPR025528 BrnA antitoxin of type II toxin-antitoxin system AM378_13560 6cc1f0d35aac4abb7cb198daa4dde32c 282 SUPERFAMILY SSF53697 103 279 1.41E-38 T 15-10-2018 AM378_13560 6cc1f0d35aac4abb7cb198daa4dde32c 282 Gene3D G3DSA:1.10.10.10 1 80 9.4E-23 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_13560 6cc1f0d35aac4abb7cb198daa4dde32c 282 Gene3D G3DSA:3.40.50.10490 98 282 8.1E-43 T 15-10-2018 AM378_13560 6cc1f0d35aac4abb7cb198daa4dde32c 282 SUPERFAMILY SSF46689 1 77 1.52E-19 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AM378_13560 6cc1f0d35aac4abb7cb198daa4dde32c 282 Pfam PF01418 Helix-turn-helix domain, rpiR family 1 76 3.9E-26 T 15-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 AM378_13560 6cc1f0d35aac4abb7cb198daa4dde32c 282 Pfam PF01380 SIS domain 128 257 6.2E-28 T 15-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 AM378_14580 d21d6ab49cb27d6bc3ac49271bd07766 307 Gene3D G3DSA:1.10.10.10 2 85 1.5E-16 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_14580 d21d6ab49cb27d6bc3ac49271bd07766 307 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 64 1.4E-15 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_14580 d21d6ab49cb27d6bc3ac49271bd07766 307 SUPERFAMILY SSF46785 2 84 8.71E-17 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM378_14580 d21d6ab49cb27d6bc3ac49271bd07766 307 SUPERFAMILY SSF53850 94 298 4.48E-41 T 15-10-2018 AM378_14580 d21d6ab49cb27d6bc3ac49271bd07766 307 Pfam PF03466 LysR substrate binding domain 93 294 6.7E-41 T 15-10-2018 IPR005119 LysR, substrate-binding AM378_14580 d21d6ab49cb27d6bc3ac49271bd07766 307 Gene3D G3DSA:3.40.190.290 94 301 5.1E-38 T 15-10-2018 AM378_03975 a08afe43b797e9e97b64aee5527a9368 521 PIRSF PIRSF006060 1 456 2.6E-73 T 15-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 AM378_03975 a08afe43b797e9e97b64aee5527a9368 521 Pfam PF13520 Amino acid permease 12 465 4.0E-40 T 15-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 AM378_03975 a08afe43b797e9e97b64aee5527a9368 521 Gene3D G3DSA:1.20.1740.10 6 460 5.4E-76 T 15-10-2018 AM378_16445 2f10641e47969e0500a3a3ba22df97db 95 Pfam PF13997 YqjK-like protein 14 86 1.7E-31 T 15-10-2018 IPR025612 YqjK-like protein AM378_05965 7e0c5b50f57ee95457896ed8c843f2f6 284 Pfam PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase 11 248 6.1E-84 T 15-10-2018 IPR006748 Aminoglycoside/hydroxyurea antibiotic resistance kinase GO:0006468|GO:0016773|GO:0019748 AM378_05965 7e0c5b50f57ee95457896ed8c843f2f6 284 Gene3D G3DSA:3.90.1200.10 121 236 9.0E-6 T 15-10-2018 AM378_05965 7e0c5b50f57ee95457896ed8c843f2f6 284 SUPERFAMILY SSF56112 24 260 3.32E-33 T 15-10-2018 IPR011009 Protein kinase-like domain superfamily AM378_00085 a5952962228883c50b1503198e8e2c3f 265 Gene3D G3DSA:1.10.10.10 5 109 4.5E-18 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_00085 a5952962228883c50b1503198e8e2c3f 265 Pfam PF00486 Transcriptional regulatory protein, C terminal 24 101 8.8E-15 T 15-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AM378_00085 a5952962228883c50b1503198e8e2c3f 265 SUPERFAMILY SSF46894 23 101 3.68E-15 T 15-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AM378_00085 a5952962228883c50b1503198e8e2c3f 265 SMART SM00862 24 101 4.8E-13 T 15-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AM378_20675 9237994f794b6e7632bdf0c2a9f58be4 66 SUPERFAMILY SSF54285 1 66 1.6E-17 T 15-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp AM378_20675 9237994f794b6e7632bdf0c2a9f58be4 66 Gene3D G3DSA:3.10.20.30 1 66 3.8E-21 T 15-10-2018 IPR012675 Beta-grasp domain superfamily AM378_20675 9237994f794b6e7632bdf0c2a9f58be4 66 Pfam PF02597 ThiS family 4 66 8.8E-15 T 15-10-2018 IPR003749 Sulfur carrier ThiS/MoaD-like Reactome: R-HSA-947581 AM378_20675 9237994f794b6e7632bdf0c2a9f58be4 66 TIGRFAM TIGR01683 thiS: thiamine biosynthesis protein ThiS 3 66 6.3E-20 T 15-10-2018 IPR010035 ThiS, thiamine-biosynthesis AM378_01315 08024a657e31de195d93697424364a22 383 Hamap MF_01693 8-amino-7-oxononanoate synthase [bioF]. 3 382 51.77 T 15-10-2018 IPR022834 8-amino-7-oxononanoate synthase, Proteobacteria GO:0008710|GO:0009102 KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147 AM378_01315 08024a657e31de195d93697424364a22 383 Gene3D G3DSA:3.40.640.10 57 284 2.3E-136 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AM378_01315 08024a657e31de195d93697424364a22 383 Gene3D G3DSA:3.90.1150.10 41 376 2.3E-136 T 15-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AM378_01315 08024a657e31de195d93697424364a22 383 Pfam PF00155 Aminotransferase class I and II 42 378 7.9E-60 T 15-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AM378_01315 08024a657e31de195d93697424364a22 383 TIGRFAM TIGR00858 bioF: 8-amino-7-oxononanoate synthase 20 379 1.4E-139 T 15-10-2018 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type GO:0008710|GO:0009102 KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147 AM378_01315 08024a657e31de195d93697424364a22 383 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 233 242 - T 15-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 AM378_01315 08024a657e31de195d93697424364a22 383 SUPERFAMILY SSF53383 3 381 1.04E-107 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM378_04170 57714b826f0f7028a78a9f3a1865c739 181 Gene3D G3DSA:3.40.630.30 1 165 1.2E-12 T 15-10-2018 AM378_04170 57714b826f0f7028a78a9f3a1865c739 181 SUPERFAMILY SSF55729 1 161 1.98E-13 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase AM378_11035 8f8db2f3ad311b29344b6a0f2c63685b 100 SUPERFAMILY SSF47413 20 96 8.04E-14 T 15-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AM378_11035 8f8db2f3ad311b29344b6a0f2c63685b 100 Pfam PF13744 Helix-turn-helix domain 12 88 1.9E-9 T 15-10-2018 IPR039554 HigA2-like, helix-turn-helix domain AM378_11035 8f8db2f3ad311b29344b6a0f2c63685b 100 Gene3D G3DSA:1.10.260.40 12 89 2.3E-10 T 15-10-2018 AM378_04030 3c106c2afa4d86dc8ef8a954db885125 74 Pfam PF10769 Protein of unknown function (DUF2594) 1 74 7.6E-40 T 15-10-2018 AM378_16005 0350a5b78bb9cc316ad5deaeb1eeecdb 260 PIRSF PIRSF006157 1 260 9.8E-92 T 15-10-2018 IPR014436 Extradiol aromatic ring-opening dioxygenase, DODA-type GO:0008270|GO:0016701|GO:0055114 AM378_16005 0350a5b78bb9cc316ad5deaeb1eeecdb 260 SUPERFAMILY SSF53213 5 259 2.35E-91 T 15-10-2018 AM378_16005 0350a5b78bb9cc316ad5deaeb1eeecdb 260 Pfam PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase 8 237 1.9E-31 T 15-10-2018 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 AM378_16005 0350a5b78bb9cc316ad5deaeb1eeecdb 260 Gene3D G3DSA:3.40.830.10 1 260 3.7E-92 T 15-10-2018 AM378_15245 47fa312af96163beaff8e10d7ee3b7c3 264 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 8 115 3.2E-11 T 15-10-2018 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 AM378_15245 47fa312af96163beaff8e10d7ee3b7c3 264 SUPERFAMILY SSF55347 120 233 3.2E-28 T 15-10-2018 AM378_15245 47fa312af96163beaff8e10d7ee3b7c3 264 Hamap MF_01265 Probable L-aspartate dehydrogenase [nadX]. 1 263 31.988 T 15-10-2018 IPR020626 L-aspartate dehydrogenase, prokaryotic GO:0009435|GO:0033735|GO:0055114 KEGG: 00760+1.4.1.21 AM378_15245 47fa312af96163beaff8e10d7ee3b7c3 264 Gene3D G3DSA:3.30.360.10 120 238 1.5E-69 T 15-10-2018 AM378_15245 47fa312af96163beaff8e10d7ee3b7c3 264 SUPERFAMILY SSF51735 1 149 4.49E-20 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily AM378_15245 47fa312af96163beaff8e10d7ee3b7c3 264 PIRSF PIRSF005227 1 263 3.6E-71 T 15-10-2018 IPR011182 L-aspartate dehydrogenase GO:0009435|GO:0033735|GO:0055114 KEGG: 00760+1.4.1.21 AM378_15245 47fa312af96163beaff8e10d7ee3b7c3 264 Gene3D G3DSA:3.40.50.720 6 255 1.5E-69 T 15-10-2018 AM378_15245 47fa312af96163beaff8e10d7ee3b7c3 264 Pfam PF01958 Domain of unknown function DUF108 164 251 5.7E-31 T 15-10-2018 IPR002811 Aspartate dehydrogenase GO:0006742|GO:0016491|GO:0019363|GO:0055114 KEGG: 00760+1.4.1.21 AM378_13920 f37daa4e2797d269954cf6f950175465 298 SUPERFAMILY SSF46785 1 112 4.66E-23 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM378_13920 f37daa4e2797d269954cf6f950175465 298 Gene3D G3DSA:3.40.190.290 91 293 3.5E-56 T 15-10-2018 AM378_13920 f37daa4e2797d269954cf6f950175465 298 SUPERFAMILY SSF53850 89 295 1.11E-40 T 15-10-2018 AM378_13920 f37daa4e2797d269954cf6f950175465 298 Pfam PF03466 LysR substrate binding domain 88 294 8.8E-42 T 15-10-2018 IPR005119 LysR, substrate-binding AM378_13920 f37daa4e2797d269954cf6f950175465 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 1.5E-18 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_13920 f37daa4e2797d269954cf6f950175465 298 Gene3D G3DSA:1.10.10.10 2 90 4.3E-28 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_05600 95b718a4a25c6d4c23cd3a53084d94b9 337 TIGRFAM TIGR00545 lipoyltrans: lipoyltransferase and lipoate-protein ligase 4 327 2.1E-122 T 15-10-2018 IPR004562 Lipoyltransferase/lipoate-protein ligase GO:0009249 KEGG: 00785+6.3.1.20|Reactome: R-HSA-389661 AM378_05600 95b718a4a25c6d4c23cd3a53084d94b9 337 Pfam PF10437 Bacterial lipoate protein ligase C-terminus 249 332 6.9E-17 T 15-10-2018 IPR019491 Lipoate protein ligase, C-terminal KEGG: 00785+6.3.1.20 AM378_05600 95b718a4a25c6d4c23cd3a53084d94b9 337 Pfam PF03099 Biotin/lipoate A/B protein ligase family 49 157 1.4E-7 T 15-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 AM378_05600 95b718a4a25c6d4c23cd3a53084d94b9 337 SUPERFAMILY SSF82649 247 336 9.42E-24 T 15-10-2018 AM378_05600 95b718a4a25c6d4c23cd3a53084d94b9 337 Gene3D G3DSA:3.30.930.10 2 248 4.1E-86 T 15-10-2018 AM378_05600 95b718a4a25c6d4c23cd3a53084d94b9 337 Gene3D G3DSA:3.30.390.50 249 337 1.1E-26 T 15-10-2018 AM378_05600 95b718a4a25c6d4c23cd3a53084d94b9 337 SUPERFAMILY SSF55681 4 246 2.15E-77 T 15-10-2018 AM378_05600 95b718a4a25c6d4c23cd3a53084d94b9 337 Hamap MF_01602 Lipoate-protein ligase A [lplA]. 1 337 56.482 T 15-10-2018 IPR023741 Lipoate-protein ligase A GO:0009249|GO:0016979 KEGG: 00785+6.3.1.20 AM378_22455 8a3b2e2dd7881c94e8449f91c077374b 228 TIGRFAM TIGR00050 rRNA_methyl_1: RNA methyltransferase, TrmH family, group 1 2 225 1.1E-68 T 15-10-2018 IPR004384 RNA methyltransferase TrmJ/LasT GO:0006396|GO:0008173 AM378_22455 8a3b2e2dd7881c94e8449f91c077374b 228 PIRSF PIRSF004808 1 228 6.6E-62 T 15-10-2018 IPR004384 RNA methyltransferase TrmJ/LasT GO:0006396|GO:0008173 AM378_22455 8a3b2e2dd7881c94e8449f91c077374b 228 Pfam PF00588 SpoU rRNA Methylase family 3 153 1.2E-34 T 15-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 AM378_22455 8a3b2e2dd7881c94e8449f91c077374b 228 Gene3D G3DSA:3.40.1280.10 1 162 3.2E-52 T 15-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AM378_22455 8a3b2e2dd7881c94e8449f91c077374b 228 SUPERFAMILY SSF75217 2 156 5.43E-32 T 15-10-2018 IPR029028 Alpha/beta knot methyltransferases AM378_04835 c81e05728f34981e42711d8306b623f2 277 SUPERFAMILY SSF53335 3 273 6.95E-62 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM378_04835 c81e05728f34981e42711d8306b623f2 277 Hamap MF_02126 Release factor glutamine methyltransferase [prmC]. 4 275 45.797 T 15-10-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 AM378_04835 c81e05728f34981e42711d8306b623f2 277 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 1 275 1.5E-88 T 15-10-2018 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 AM378_04835 c81e05728f34981e42711d8306b623f2 277 TIGRFAM TIGR03534 RF_mod_PrmC: protein-(glutamine-N5) methyltransferase, release factor-specific 23 271 1.3E-89 T 15-10-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 AM378_04835 c81e05728f34981e42711d8306b623f2 277 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 180 186 - T 15-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 AM378_04835 c81e05728f34981e42711d8306b623f2 277 Pfam PF13847 Methyltransferase domain 111 243 3.8E-22 T 15-10-2018 IPR025714 Methyltransferase domain AM378_04835 c81e05728f34981e42711d8306b623f2 277 Gene3D G3DSA:1.10.8.10 1 84 6.7E-25 T 15-10-2018 AM378_04835 c81e05728f34981e42711d8306b623f2 277 Gene3D G3DSA:3.40.50.150 85 275 6.1E-62 T 15-10-2018 AM378_11230 af3fe6f51b82446d2876c50be934963b 255 SUPERFAMILY SSF47090 179 254 2.31E-18 T 15-10-2018 IPR036365 PGBD-like superfamily AM378_11230 af3fe6f51b82446d2876c50be934963b 255 SUPERFAMILY SSF55846 11 174 9.55E-45 T 15-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 AM378_11230 af3fe6f51b82446d2876c50be934963b 255 SMART SM00644 7 158 1.5E-33 T 15-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 AM378_11230 af3fe6f51b82446d2876c50be934963b 255 Gene3D G3DSA:3.40.80.10 17 172 2.0E-52 T 15-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 AM378_11230 af3fe6f51b82446d2876c50be934963b 255 Gene3D G3DSA:1.10.101.10 173 255 7.6E-27 T 15-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 AM378_11230 af3fe6f51b82446d2876c50be934963b 255 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 17 159 8.6E-27 T 15-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 AM378_13425 7c71ceb65e5258f47049f1153cc0a95e 421 SUPERFAMILY SSF63520 226 328 1.07E-18 T 15-10-2018 IPR036634 PRD domain superfamily GO:0006355 AM378_13425 7c71ceb65e5258f47049f1153cc0a95e 421 Gene3D G3DSA:1.10.1790.10 226 326 3.0E-14 T 15-10-2018 AM378_13425 7c71ceb65e5258f47049f1153cc0a95e 421 Pfam PF00874 PRD domain 235 323 1.0E-16 T 15-10-2018 IPR011608 PRD domain GO:0006355 AM378_03125 af1eb47e51eb8724851d7bc2dbc9f9b3 107 Gene3D G3DSA:3.30.1450.10 9 105 3.4E-8 T 15-10-2018 IPR037873 BamE-like AM378_04610 1c5fb2cf6e30015d889c1238b2c37cb8 239 Pfam PF00072 Response regulator receiver domain 4 117 1.2E-21 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM378_04610 1c5fb2cf6e30015d889c1238b2c37cb8 239 Gene3D G3DSA:3.40.50.2300 1 141 3.5E-27 T 15-10-2018 AM378_04610 1c5fb2cf6e30015d889c1238b2c37cb8 239 SUPERFAMILY SSF52172 1 163 1.85E-31 T 15-10-2018 IPR011006 CheY-like superfamily AM378_04610 1c5fb2cf6e30015d889c1238b2c37cb8 239 SUPERFAMILY SSF46785 172 229 2.72E-5 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM378_04610 1c5fb2cf6e30015d889c1238b2c37cb8 239 SMART SM00448 2 117 3.2E-22 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM378_04610 1c5fb2cf6e30015d889c1238b2c37cb8 239 PIRSF PIRSF006171 1 228 1.3E-80 T 15-10-2018 IPR024187 Signal transduction response regulator, citrate/malate metabolism GO:0000160|GO:0003700 AM378_01560 e05b9c91b8abc4abc2fce5b12c602c26 196 Pfam PF06930 Protein of unknown function (DUF1282) 8 179 5.3E-54 T 15-10-2018 IPR009698 Protein of unknown function DUF1282 AM378_04340 fb0e64619aa516d098a421fd39e5cc2e 309 SUPERFAMILY SSF52151 4 308 8.63E-84 T 15-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase AM378_04340 fb0e64619aa516d098a421fd39e5cc2e 309 TIGRFAM TIGR00128 fabD: malonyl CoA-acyl carrier protein transacylase 3 291 2.5E-131 T 15-10-2018 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type GO:0004314 KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 AM378_04340 fb0e64619aa516d098a421fd39e5cc2e 309 PIRSF PIRSF000446 1 309 6.2E-142 T 15-10-2018 IPR024925 Malonyl CoA-acyl carrier protein transacylase KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 AM378_04340 fb0e64619aa516d098a421fd39e5cc2e 309 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 7 307 1.8E-47 T 15-10-2018 IPR020801 Polyketide synthase, acyl transferase domain AM378_04340 fb0e64619aa516d098a421fd39e5cc2e 309 Pfam PF00698 Acyl transferase domain 6 287 1.4E-40 T 15-10-2018 IPR014043 Acyl transferase AM378_04340 fb0e64619aa516d098a421fd39e5cc2e 309 Gene3D G3DSA:3.30.70.250 125 197 1.1E-111 T 15-10-2018 AM378_04340 fb0e64619aa516d098a421fd39e5cc2e 309 Gene3D G3DSA:3.40.366.10 6 286 1.1E-111 T 15-10-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 AM378_04340 fb0e64619aa516d098a421fd39e5cc2e 309 SUPERFAMILY SSF55048 128 197 1.7E-17 T 15-10-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding AM378_00435 9b58da79d801827fdfd7df65a603ab00 380 TIGRFAM TIGR00045 TIGR00045: glycerate kinase 2 375 6.8E-158 T 15-10-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 AM378_00435 9b58da79d801827fdfd7df65a603ab00 380 Gene3D G3DSA:3.90.1510.10 42 276 4.2E-138 T 15-10-2018 IPR018193 Glycerate kinase, flavodoxin-like fold GO:0008887|GO:0031388 AM378_00435 9b58da79d801827fdfd7df65a603ab00 380 PIRSF PIRSF006078 1 377 7.7E-135 T 15-10-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 AM378_00435 9b58da79d801827fdfd7df65a603ab00 380 Pfam PF02595 Glycerate kinase family 3 373 2.3E-143 T 15-10-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 AM378_00435 9b58da79d801827fdfd7df65a603ab00 380 Gene3D G3DSA:3.40.50.10350 1 362 4.2E-138 T 15-10-2018 IPR018197 Glycerate kinase, restriction-enzyme-like fold AM378_00435 9b58da79d801827fdfd7df65a603ab00 380 SUPERFAMILY SSF110738 1 375 4.58E-132 T 15-10-2018 IPR036129 Glycerate kinase superfamily GO:0008887|GO:0031388 AM378_21830 a8eda715fb070463dcacafc0a4dbd47a 67 Pfam PF04328 Selenoprotein, putative 5 67 7.1E-30 T 15-10-2018 IPR007423 Selenoprotein, putative AM378_12805 c07c5046181b8c62fbabfdada6ba0f98 375 SUPERFAMILY SSF55031 179 288 5.38E-29 T 15-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain AM378_12805 c07c5046181b8c62fbabfdada6ba0f98 375 Gene3D G3DSA:3.30.70.360 179 292 1.7E-127 T 15-10-2018 AM378_12805 c07c5046181b8c62fbabfdada6ba0f98 375 Pfam PF01546 Peptidase family M20/M25/M40 62 371 6.9E-45 T 15-10-2018 IPR002933 Peptidase M20 GO:0016787 AM378_12805 c07c5046181b8c62fbabfdada6ba0f98 375 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 97 136 - T 15-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 AM378_12805 c07c5046181b8c62fbabfdada6ba0f98 375 TIGRFAM TIGR01246 dapE_proteo: succinyl-diaminopimelate desuccinylase 6 373 2.5E-178 T 15-10-2018 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18 AM378_12805 c07c5046181b8c62fbabfdada6ba0f98 375 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 61 70 - T 15-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 AM378_12805 c07c5046181b8c62fbabfdada6ba0f98 375 Gene3D G3DSA:3.40.630.10 8 360 1.7E-127 T 15-10-2018 AM378_12805 c07c5046181b8c62fbabfdada6ba0f98 375 Pfam PF07687 Peptidase dimerisation domain 175 282 3.6E-24 T 15-10-2018 IPR011650 Peptidase M20, dimerisation domain AM378_12805 c07c5046181b8c62fbabfdada6ba0f98 375 Hamap MF_01690 Succinyl-diaminopimelate desuccinylase [dapE]. 3 375 52.823 T 15-10-2018 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18 AM378_12805 c07c5046181b8c62fbabfdada6ba0f98 375 SUPERFAMILY SSF53187 5 373 1.39E-64 T 15-10-2018 AM378_10685 d96fb2eefe86ce8262b420faf5b74e89 274 ProSitePatterns PS00063 Aldo/keto reductase family putative active site signature. 229 244 - T 15-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 AM378_10685 d96fb2eefe86ce8262b420faf5b74e89 274 ProSitePatterns PS00062 Aldo/keto reductase family signature 2. 123 140 - T 15-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 AM378_10685 d96fb2eefe86ce8262b420faf5b74e89 274 PIRSF PIRSF000097 1 272 1.1E-86 T 15-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AM378_10685 d96fb2eefe86ce8262b420faf5b74e89 274 ProSitePatterns PS00798 Aldo/keto reductase family signature 1. 41 58 - T 15-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 AM378_10685 d96fb2eefe86ce8262b420faf5b74e89 274 SUPERFAMILY SSF51430 6 267 7.86E-91 T 15-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily AM378_10685 d96fb2eefe86ce8262b420faf5b74e89 274 PRINTS PR00069 Aldo-keto reductase signature 37 61 3.1E-47 T 15-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AM378_10685 d96fb2eefe86ce8262b420faf5b74e89 274 PRINTS PR00069 Aldo-keto reductase signature 91 109 3.1E-47 T 15-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AM378_10685 d96fb2eefe86ce8262b420faf5b74e89 274 PRINTS PR00069 Aldo-keto reductase signature 157 186 3.1E-47 T 15-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AM378_10685 d96fb2eefe86ce8262b420faf5b74e89 274 PRINTS PR00069 Aldo-keto reductase signature 196 220 3.1E-47 T 15-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AM378_10685 d96fb2eefe86ce8262b420faf5b74e89 274 PRINTS PR00069 Aldo-keto reductase signature 123 140 3.1E-47 T 15-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AM378_10685 d96fb2eefe86ce8262b420faf5b74e89 274 Pfam PF00248 Aldo/keto reductase family 18 260 3.7E-51 T 15-10-2018 IPR023210 NADP-dependent oxidoreductase domain AM378_10685 d96fb2eefe86ce8262b420faf5b74e89 274 Gene3D G3DSA:3.20.20.100 3 274 4.1E-110 T 15-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily AM378_22895 5d315dc3243a57a243023506eb6f043c 63 Gene3D G3DSA:3.30.50.10 1 63 5.8E-27 T 15-10-2018 IPR013088 Zinc finger, NHR/GATA-type GO:0006355|GO:0008270 Reactome: R-HSA-383280 AM378_22895 5d315dc3243a57a243023506eb6f043c 63 SUPERFAMILY SSF57716 2 61 1.57E-22 T 15-10-2018 AM378_22895 5d315dc3243a57a243023506eb6f043c 63 Hamap MF_00649 DNA gyrase inhibitor YacG [yacG]. 1 57 19.137 T 15-10-2018 IPR005584 DNA gyrase inhibitor YacG GO:0008270 AM378_22895 5d315dc3243a57a243023506eb6f043c 63 Pfam PF03884 DNA gyrase inhibitor YacG 5 54 3.6E-25 T 15-10-2018 IPR005584 DNA gyrase inhibitor YacG GO:0008270 AM378_12870 aedff9206120a1213c57987a7f70029e 731 SUPERFAMILY SSF56935 75 731 4.76E-97 T 15-10-2018 AM378_12870 aedff9206120a1213c57987a7f70029e 731 Gene3D G3DSA:2.170.130.10 75 193 2.1E-19 T 15-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily AM378_12870 aedff9206120a1213c57987a7f70029e 731 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 84 731 8.9E-122 T 15-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 AM378_12870 aedff9206120a1213c57987a7f70029e 731 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 47 - T 15-10-2018 IPR010916 TonB box, conserved site AM378_12870 aedff9206120a1213c57987a7f70029e 731 Pfam PF07715 TonB-dependent Receptor Plug Domain 82 179 3.8E-12 T 15-10-2018 IPR012910 TonB-dependent receptor, plug domain AM378_12870 aedff9206120a1213c57987a7f70029e 731 Pfam PF00593 TonB dependent receptor 254 729 2.4E-28 T 15-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel AM378_12870 aedff9206120a1213c57987a7f70029e 731 Gene3D G3DSA:2.40.170.20 194 731 1.7E-75 T 15-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AM378_03990 d3e3d644a2712879378a5f3ea62c8c57 284 Pfam PF08448 PAS fold 62 174 2.0E-19 T 15-10-2018 IPR013656 PAS fold-4 AM378_03990 d3e3d644a2712879378a5f3ea62c8c57 284 Gene3D G3DSA:3.30.450.20 46 182 5.0E-14 T 15-10-2018 AM378_03990 d3e3d644a2712879378a5f3ea62c8c57 284 Gene3D G3DSA:1.10.10.60 183 281 9.1E-27 T 15-10-2018 AM378_03990 d3e3d644a2712879378a5f3ea62c8c57 284 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 234 275 - T 15-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AM378_03990 d3e3d644a2712879378a5f3ea62c8c57 284 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 263 279 1.7E-6 T 15-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM378_03990 d3e3d644a2712879378a5f3ea62c8c57 284 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 248 263 1.7E-6 T 15-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM378_03990 d3e3d644a2712879378a5f3ea62c8c57 284 SUPERFAMILY SSF46689 233 279 2.82E-12 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AM378_03990 d3e3d644a2712879378a5f3ea62c8c57 284 Pfam PF12833 Helix-turn-helix domain 205 279 4.7E-22 T 15-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM378_03990 d3e3d644a2712879378a5f3ea62c8c57 284 SMART SM00342 197 279 1.7E-23 T 15-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM378_03990 d3e3d644a2712879378a5f3ea62c8c57 284 SUPERFAMILY SSF55785 48 166 1.74E-9 T 15-10-2018 IPR035965 PAS domain superfamily AM378_18105 e7b00bc13539cdcef45a58be0d1ecd15 298 Hamap MF_01672 Inosose dehydratase [iolE]. 1 298 56.28 T 15-10-2018 IPR023952 Inosose dehydratase GO:0019310|GO:0030145|GO:0050114 KEGG: 00562+4.2.1.44 AM378_18105 e7b00bc13539cdcef45a58be0d1ecd15 298 SUPERFAMILY SSF51658 7 295 1.96E-58 T 15-10-2018 IPR036237 Xylose isomerase-like superfamily AM378_18105 e7b00bc13539cdcef45a58be0d1ecd15 298 TIGRFAM TIGR04379 myo_inos_iolE: myo-inosose-2 dehydratase 5 295 6.3E-119 T 15-10-2018 IPR030823 IolE/MocC family KEGG: 00562+4.2.1.44 AM378_18105 e7b00bc13539cdcef45a58be0d1ecd15 298 Gene3D G3DSA:3.20.20.150 1 295 2.1E-81 T 15-10-2018 AM378_18105 e7b00bc13539cdcef45a58be0d1ecd15 298 Pfam PF01261 Xylose isomerase-like TIM barrel 36 250 2.9E-25 T 15-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain AM378_04300 80155b50c357bbf51bb16327d3f18aaa 1126 SMART SM00316 37 119 2.8E-12 T 15-10-2018 IPR022967 RNA-binding domain, S1 AM378_04300 80155b50c357bbf51bb16327d3f18aaa 1126 Pfam PF12111 Polyribonucleotide phosphorylase C terminal 1088 1122 5.5E-19 T 15-10-2018 IPR021968 Polyribonucleotide phosphorylase C-terminal AM378_04300 80155b50c357bbf51bb16327d3f18aaa 1126 Pfam PF10150 Ribonuclease E/G family 121 391 7.5E-92 T 15-10-2018 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 AM378_04300 80155b50c357bbf51bb16327d3f18aaa 1126 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 13 425 5.0E-170 T 15-10-2018 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 AM378_04300 80155b50c357bbf51bb16327d3f18aaa 1126 Hamap MF_00970 Ribonuclease E [rne]. 1 1111 38.936 T 15-10-2018 IPR028878 Ribonuclease E GO:0006396|GO:0008995 AM378_04300 80155b50c357bbf51bb16327d3f18aaa 1126 Gene3D G3DSA:2.40.50.140 32 125 9.7E-34 T 15-10-2018 AM378_04300 80155b50c357bbf51bb16327d3f18aaa 1126 Pfam PF00575 S1 RNA binding domain 36 118 3.3E-16 T 15-10-2018 IPR003029 S1 domain GO:0003676 AM378_04300 80155b50c357bbf51bb16327d3f18aaa 1126 Gene3D G3DSA:3.40.1260.20 401 510 8.5E-44 T 15-10-2018 AM378_04300 80155b50c357bbf51bb16327d3f18aaa 1126 SUPERFAMILY SSF50249 40 124 1.24E-20 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold AM378_23060 4965399b924036f23193c64ee11a1c51 119 Pfam PF01242 6-pyruvoyl tetrahydropterin synthase 6 118 2.8E-35 T 15-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 AM378_23060 4965399b924036f23193c64ee11a1c51 119 PIRSF PIRSF006113 1 119 3.7E-55 T 15-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 AM378_23060 4965399b924036f23193c64ee11a1c51 119 TIGRFAM TIGR00039 6PTHBS: 6-pyruvoyl tetrahydropterin synthase/QueD family protein 3 118 1.5E-37 T 15-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 AM378_23060 4965399b924036f23193c64ee11a1c51 119 Gene3D G3DSA:3.30.479.10 1 119 9.4E-51 T 15-10-2018 IPR038418 6-pyruvoyl tetrahydropterin synthase/QueD superfamily Reactome: R-HSA-1474151 AM378_23060 4965399b924036f23193c64ee11a1c51 119 SUPERFAMILY SSF55620 3 118 2.11E-41 T 15-10-2018 AM378_23060 4965399b924036f23193c64ee11a1c51 119 TIGRFAM TIGR03367 queuosine_QueD: queuosine biosynthesis protein QueD 5 96 2.5E-33 T 15-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 AM378_18785 109e719e766eb59f83b4dfda7e56431c 255 TIGRFAM TIGR00419 tim: triose-phosphate isomerase 5 240 4.9E-94 T 15-10-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM378_18785 109e719e766eb59f83b4dfda7e56431c 255 Hamap MF_00147_B Triosephosphate isomerase [tpiA]. 2 248 61.578 T 15-10-2018 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic GO:0004807|GO:0006096 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM378_18785 109e719e766eb59f83b4dfda7e56431c 255 ProSitePatterns PS00171 Triosephosphate isomerase active site. 165 175 - T 15-10-2018 IPR020861 Triosephosphate isomerase, active site GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM378_18785 109e719e766eb59f83b4dfda7e56431c 255 SUPERFAMILY SSF51351 1 249 2.09E-91 T 15-10-2018 IPR035990 Triosephosphate isomerase superfamily GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM378_18785 109e719e766eb59f83b4dfda7e56431c 255 Gene3D G3DSA:3.20.20.70 1 255 1.3E-103 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM378_18785 109e719e766eb59f83b4dfda7e56431c 255 Pfam PF00121 Triosephosphate isomerase 5 246 2.6E-93 T 15-10-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM378_22010 63f42108cf2ee5dfdce55f2fe8e0db1e 369 Pfam PF03576 Peptidase family S58 21 348 6.6E-107 T 15-10-2018 IPR005321 Peptidase S58, DmpA AM378_22010 63f42108cf2ee5dfdce55f2fe8e0db1e 369 Gene3D G3DSA:3.60.70.12 2 369 4.6E-127 T 15-10-2018 IPR016117 ArgJ-like domain superfamily KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 AM378_22010 63f42108cf2ee5dfdce55f2fe8e0db1e 369 SUPERFAMILY SSF56266 4 366 3.4E-109 T 15-10-2018 IPR016117 ArgJ-like domain superfamily KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 AM378_05655 4e68854a22b8ba4b6bc1df5deb99490e 273 Pfam PF03618 Kinase/pyrophosphorylase 5 263 6.0E-74 T 15-10-2018 IPR005177 Bifunctional kinase-pyrophosphorylase GO:0005524|GO:0016772 AM378_05655 4e68854a22b8ba4b6bc1df5deb99490e 273 SUPERFAMILY SSF47454 173 230 6.02E-5 T 15-10-2018 IPR008917 Transcription factor, Skn-1-like, DNA-binding domain superfamily GO:0003677|GO:0006355 AM378_05655 4e68854a22b8ba4b6bc1df5deb99490e 273 Hamap MF_01062 Phosphoenolpyruvate synthase regulatory protein [ppsR]. 2 272 73.591 T 15-10-2018 IPR026530 Phosphoenolpyruvate synthase regulatory protein AM378_14610 d72726d1e60fa88f914790794d41a288 144 Pfam PF03610 PTS system fructose IIA component 3 114 1.6E-27 T 15-10-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 AM378_14610 d72726d1e60fa88f914790794d41a288 144 SUPERFAMILY SSF53062 1 126 1.09E-32 T 15-10-2018 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily GO:0009401|GO:0016021 AM378_14610 d72726d1e60fa88f914790794d41a288 144 Gene3D G3DSA:3.40.50.510 1 139 2.0E-33 T 15-10-2018 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily GO:0009401|GO:0016021 AM378_14850 1b9bb3b5e3fb6a28442f93aa42390b69 577 Gene3D G3DSA:2.40.50.460 461 576 2.5E-7 T 15-10-2018 AM378_14850 1b9bb3b5e3fb6a28442f93aa42390b69 577 TIGRFAM TIGR00644 recJ: single-stranded-DNA-specific exonuclease RecJ 24 573 3.0E-162 T 15-10-2018 IPR004610 Bacterial RecJ exonuclease GO:0006281|GO:0006310|GO:0008409 AM378_14850 1b9bb3b5e3fb6a28442f93aa42390b69 577 Pfam PF02272 DHHA1 domain 322 452 9.1E-27 T 15-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 AM378_14850 1b9bb3b5e3fb6a28442f93aa42390b69 577 Gene3D G3DSA:3.10.310.30 328 457 1.8E-30 T 15-10-2018 AM378_14850 1b9bb3b5e3fb6a28442f93aa42390b69 577 Pfam PF01368 DHH family 74 201 4.8E-9 T 15-10-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 AM378_14850 1b9bb3b5e3fb6a28442f93aa42390b69 577 SUPERFAMILY SSF64182 48 466 2.75E-119 T 15-10-2018 IPR038763 DHH phosphoesterase superfamily AM378_14850 1b9bb3b5e3fb6a28442f93aa42390b69 577 Gene3D G3DSA:3.90.1640.30 48 326 9.3E-92 T 15-10-2018 AM378_11385 91dfe1df788327d48b0f41f6d31e2a9b 414 PIRSF PIRSF006060 318 413 8.6 T 15-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 AM378_11385 91dfe1df788327d48b0f41f6d31e2a9b 414 PIRSF PIRSF006060 12 305 3.4E-10 T 15-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 AM378_11385 91dfe1df788327d48b0f41f6d31e2a9b 414 TIGRFAM TIGR00837 araaP: aromatic amino acid transport protein 16 395 9.9E-147 T 15-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 AM378_11385 91dfe1df788327d48b0f41f6d31e2a9b 414 PRINTS PR00166 Aromatic amino acid permease signature 19 42 1.6E-97 T 15-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 AM378_11385 91dfe1df788327d48b0f41f6d31e2a9b 414 PRINTS PR00166 Aromatic amino acid permease signature 46 65 1.6E-97 T 15-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 AM378_11385 91dfe1df788327d48b0f41f6d31e2a9b 414 PRINTS PR00166 Aromatic amino acid permease signature 327 345 1.6E-97 T 15-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 AM378_11385 91dfe1df788327d48b0f41f6d31e2a9b 414 PRINTS PR00166 Aromatic amino acid permease signature 91 111 1.6E-97 T 15-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 AM378_11385 91dfe1df788327d48b0f41f6d31e2a9b 414 PRINTS PR00166 Aromatic amino acid permease signature 155 175 1.6E-97 T 15-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 AM378_11385 91dfe1df788327d48b0f41f6d31e2a9b 414 PRINTS PR00166 Aromatic amino acid permease signature 348 367 1.6E-97 T 15-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 AM378_11385 91dfe1df788327d48b0f41f6d31e2a9b 414 PRINTS PR00166 Aromatic amino acid permease signature 193 215 1.6E-97 T 15-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 AM378_11385 91dfe1df788327d48b0f41f6d31e2a9b 414 PRINTS PR00166 Aromatic amino acid permease signature 232 251 1.6E-97 T 15-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 AM378_11385 91dfe1df788327d48b0f41f6d31e2a9b 414 PRINTS PR00166 Aromatic amino acid permease signature 293 312 1.6E-97 T 15-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 AM378_11385 91dfe1df788327d48b0f41f6d31e2a9b 414 Pfam PF03222 Tryptophan/tyrosine permease family 11 401 6.3E-143 T 15-10-2018 IPR018227 Amino acid/polyamine transporter 2 GO:0003333 AM378_15720 5cef9edef1d949f656143e643df09059 161 Pfam PF15941 FidL-like putative membrane protein 74 156 2.4E-6 T 15-10-2018 IPR031854 Putative membrane protein FidL-like AM378_13160 ba5039abe2f31f994f359d284d0a0708 118 Pfam PF06923 Glucitol operon activator protein (GutM) 5 110 6.8E-33 T 15-10-2018 IPR009693 Glucitol operon activator AM378_13160 ba5039abe2f31f994f359d284d0a0708 118 PIRSF PIRSF011474 1 118 7.3E-37 T 15-10-2018 IPR009693 Glucitol operon activator AM378_20435 c4505f2c1d8d7c834c5f5dacc96fe6a7 515 Pfam PF02646 RmuC family 171 467 2.5E-105 T 15-10-2018 IPR003798 DNA recombination RmuC AM378_02110 abf9a8414d57ce1934e002ec2a8172b2 110 Gene3D G3DSA:1.20.1290.10 3 107 1.2E-31 T 15-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 AM378_02110 abf9a8414d57ce1934e002ec2a8172b2 110 Pfam PF02627 Carboxymuconolactone decarboxylase family 17 100 4.7E-21 T 15-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 AM378_02110 abf9a8414d57ce1934e002ec2a8172b2 110 SUPERFAMILY SSF69118 8 107 3.01E-28 T 15-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 AM378_13630 de2b5e21cedd38a6908ce7906f9432ed 191 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 46 77 - T 15-10-2018 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM378_13630 de2b5e21cedd38a6908ce7906f9432ed 191 Pfam PF08281 Sigma-70, region 4 129 180 4.5E-19 T 15-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM378_13630 de2b5e21cedd38a6908ce7906f9432ed 191 SUPERFAMILY SSF88659 122 183 9.53E-19 T 15-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like AM378_13630 de2b5e21cedd38a6908ce7906f9432ed 191 TIGRFAM TIGR02939 RpoE_Sigma70: RNA polymerase sigma factor RpoE 1 189 4.3E-99 T 15-10-2018 IPR014286 RNA polymerase sigma-70 RpoE type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM378_13630 de2b5e21cedd38a6908ce7906f9432ed 191 Gene3D G3DSA:1.10.10.10 121 191 1.6E-23 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_13630 de2b5e21cedd38a6908ce7906f9432ed 191 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 22 183 3.4E-31 T 15-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 AM378_13630 de2b5e21cedd38a6908ce7906f9432ed 191 Pfam PF04542 Sigma-70 region 2 25 91 6.9E-17 T 15-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 AM378_13630 de2b5e21cedd38a6908ce7906f9432ed 191 Gene3D G3DSA:1.10.1740.10 1 120 5.2E-47 T 15-10-2018 AM378_13630 de2b5e21cedd38a6908ce7906f9432ed 191 SUPERFAMILY SSF88946 2 104 1.11E-29 T 15-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 AM378_20475 96fb64641dcf90756406b95b4550ac1c 340 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 160 179 9.7E-57 T 15-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 AM378_20475 96fb64641dcf90756406b95b4550ac1c 340 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 198 217 9.7E-57 T 15-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 AM378_20475 96fb64641dcf90756406b95b4550ac1c 340 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 129 143 9.7E-57 T 15-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 AM378_20475 96fb64641dcf90756406b95b4550ac1c 340 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 307 326 9.7E-57 T 15-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 AM378_20475 96fb64641dcf90756406b95b4550ac1c 340 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 252 268 9.7E-57 T 15-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 AM378_20475 96fb64641dcf90756406b95b4550ac1c 340 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 277 292 9.7E-57 T 15-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 AM378_20475 96fb64641dcf90756406b95b4550ac1c 340 ProSitePatterns PS00169 Delta-aminolevulinic acid dehydratase active site. 252 264 - T 15-10-2018 IPR030656 Delta-aminolevulinic acid dehydratase, active site KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 AM378_20475 96fb64641dcf90756406b95b4550ac1c 340 Gene3D G3DSA:3.20.20.70 3 337 7.3E-145 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM378_20475 96fb64641dcf90756406b95b4550ac1c 340 SUPERFAMILY SSF51569 7 335 1.07E-142 T 15-10-2018 AM378_20475 96fb64641dcf90756406b95b4550ac1c 340 PIRSF PIRSF001415 2 336 3.2E-151 T 15-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 AM378_20475 96fb64641dcf90756406b95b4550ac1c 340 Pfam PF00490 Delta-aminolevulinic acid dehydratase 12 332 7.0E-139 T 15-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 AM378_20475 96fb64641dcf90756406b95b4550ac1c 340 SMART SM01004 9 333 1.6E-237 T 15-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 AM378_04445 fb08a8e82d132f3e1dee14bef5fcc55a 180 Hamap MF_01047 UPF0227 protein YcfP [ycfP]. 1 178 51.662 T 15-10-2018 IPR022987 Uncharacterised protein family UPF0227 AM378_04445 fb08a8e82d132f3e1dee14bef5fcc55a 180 Pfam PF05728 Uncharacterised protein family (UPF0227) 1 177 1.0E-71 T 15-10-2018 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA AM378_04445 fb08a8e82d132f3e1dee14bef5fcc55a 180 SUPERFAMILY SSF53474 2 176 2.11E-7 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold AM378_04445 fb08a8e82d132f3e1dee14bef5fcc55a 180 Gene3D G3DSA:3.40.50.1820 1 179 2.4E-19 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold AM378_17070 c341fe257d7372542e3a9ed2828126de 327 SUPERFAMILY SSF51735 112 277 1.68E-47 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily AM378_17070 c341fe257d7372542e3a9ed2828126de 327 SMART SM00829 11 325 9.5E-20 T 15-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AM378_17070 c341fe257d7372542e3a9ed2828126de 327 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 29 89 1.8E-9 T 15-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AM378_17070 c341fe257d7372542e3a9ed2828126de 327 Gene3D G3DSA:3.40.50.720 124 269 1.4E-117 T 15-10-2018 AM378_17070 c341fe257d7372542e3a9ed2828126de 327 Gene3D G3DSA:3.90.180.10 11 321 1.4E-117 T 15-10-2018 AM378_17070 c341fe257d7372542e3a9ed2828126de 327 SUPERFAMILY SSF50129 9 142 3.62E-34 T 15-10-2018 IPR011032 GroES-like superfamily AM378_17070 c341fe257d7372542e3a9ed2828126de 327 Pfam PF00107 Zinc-binding dehydrogenase 152 258 1.5E-29 T 15-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AM378_17070 c341fe257d7372542e3a9ed2828126de 327 ProSitePatterns PS01162 Quinone oxidoreductase / zeta-crystallin signature. 141 162 - T 15-10-2018 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site GO:0008270|GO:0016491 AM378_16270 6b084d87c84a8bf72eab83f0f6f8a69d 193 SMART SM00479 14 188 4.4E-33 T 15-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III AM378_16270 6b084d87c84a8bf72eab83f0f6f8a69d 193 Gene3D G3DSA:3.30.420.10 11 191 3.4E-34 T 15-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AM378_16270 6b084d87c84a8bf72eab83f0f6f8a69d 193 SUPERFAMILY SSF53098 16 185 2.68E-32 T 15-10-2018 IPR012337 Ribonuclease H-like superfamily AM378_16270 6b084d87c84a8bf72eab83f0f6f8a69d 193 Pfam PF00929 Exonuclease 16 177 6.6E-17 T 15-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III AM378_16790 9652b939c4861fad432e3a5b11d42352 655 Hamap MF_01545 p-hydroxybenzoic acid efflux pump subunit AaeB [aaeB]. 1 654 53.892 T 15-10-2018 IPR023706 Para-hydroxybenzoic acid efflux pump, subunit AaeB GO:0005886|GO:0046942 AM378_16790 9652b939c4861fad432e3a5b11d42352 655 Pfam PF04632 Fusaric acid resistance protein family 8 653 6.4E-163 T 15-10-2018 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein GO:0005886|GO:0022857|GO:0055085 AM378_20800 bcfb4b966ef2819479e84bf21dd11bf5 697 SUPERFAMILY SSF56935 53 697 8.42E-91 T 15-10-2018 AM378_20800 bcfb4b966ef2819479e84bf21dd11bf5 697 Pfam PF07715 TonB-dependent Receptor Plug Domain 71 185 4.6E-9 T 15-10-2018 IPR012910 TonB-dependent receptor, plug domain AM378_20800 bcfb4b966ef2819479e84bf21dd11bf5 697 Pfam PF00593 TonB dependent receptor 276 690 1.1E-39 T 15-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel AM378_20800 bcfb4b966ef2819479e84bf21dd11bf5 697 Gene3D G3DSA:2.40.170.20 63 697 6.9E-97 T 15-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AM378_20800 bcfb4b966ef2819479e84bf21dd11bf5 697 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 680 697 - T 15-10-2018 IPR010917 TonB-dependent receptor, conserved site AM378_20800 bcfb4b966ef2819479e84bf21dd11bf5 697 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 64 - T 15-10-2018 IPR010916 TonB box, conserved site AM378_15775 ea092cd8f4bd28e04451a6f0ebcab40f 715 Gene3D G3DSA:3.40.720.10 243 500 1.4E-51 T 15-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 AM378_15775 ea092cd8f4bd28e04451a6f0ebcab40f 715 Gene3D G3DSA:3.40.720.10 33 199 6.8E-30 T 15-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 AM378_15775 ea092cd8f4bd28e04451a6f0ebcab40f 715 Pfam PF05506 Domain of unknown function (DUF756) 530 614 2.6E-21 T 15-10-2018 IPR008475 Bacterial phospholipase C, C-terminal domain GO:0004629|GO:0016042 KEGG: 00562+3.1.4.3|KEGG: 00564+3.1.4.3|KEGG: 00565+3.1.4.3|MetaCyc: PWY-7782|MetaCyc: PWY-7783 AM378_15775 ea092cd8f4bd28e04451a6f0ebcab40f 715 Pfam PF05506 Domain of unknown function (DUF756) 628 699 1.1E-11 T 15-10-2018 IPR008475 Bacterial phospholipase C, C-terminal domain GO:0004629|GO:0016042 KEGG: 00562+3.1.4.3|KEGG: 00564+3.1.4.3|KEGG: 00565+3.1.4.3|MetaCyc: PWY-7782|MetaCyc: PWY-7783 AM378_15775 ea092cd8f4bd28e04451a6f0ebcab40f 715 TIGRFAM TIGR03396 PC_PLC: phospholipase C, phosphocholine-specific 5 713 3.9E-281 T 15-10-2018 IPR017767 Bacterial phospholipase C, phosphocholine-specific GO:0034480 KEGG: 00562+3.1.4.3|KEGG: 00564+3.1.4.3|KEGG: 00565+3.1.4.3|MetaCyc: PWY-7782|MetaCyc: PWY-7783 AM378_15775 ea092cd8f4bd28e04451a6f0ebcab40f 715 Pfam PF04185 Phosphoesterase family 44 457 8.3E-108 T 15-10-2018 IPR007312 Phosphoesterase GO:0016788 AM378_11090 3375b5156efa43161272d36e2706c596 243 Gene3D G3DSA:3.40.50.300 7 228 6.4E-23 T 15-10-2018 AM378_11090 3375b5156efa43161272d36e2706c596 243 SUPERFAMILY SSF52540 6 226 1.5E-13 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_21750 bf736d8353f83fbaf013c539722841af 447 Gene3D G3DSA:3.90.220.20 5 198 1.2E-27 T 15-10-2018 AM378_21750 bf736d8353f83fbaf013c539722841af 447 Gene3D G3DSA:3.90.220.20 206 405 2.1E-33 T 15-10-2018 AM378_21750 bf736d8353f83fbaf013c539722841af 447 SUPERFAMILY SSF116734 206 414 1.23E-30 T 15-10-2018 AM378_21750 bf736d8353f83fbaf013c539722841af 447 SUPERFAMILY SSF116734 8 200 6.87E-25 T 15-10-2018 AM378_21750 bf736d8353f83fbaf013c539722841af 447 Pfam PF01420 Type I restriction modification DNA specificity domain 61 180 1.5E-6 T 15-10-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 AM378_21750 bf736d8353f83fbaf013c539722841af 447 Pfam PF01420 Type I restriction modification DNA specificity domain 259 387 5.9E-13 T 15-10-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 AM378_20185 512efd1a46ae5b2ce216d479405cd66f 206 PIRSF PIRSF006324 1 206 2.4E-41 T 15-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AM378_20185 512efd1a46ae5b2ce216d479405cd66f 206 Pfam PF01810 LysE type translocator 14 204 9.4E-53 T 15-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AM378_20185 512efd1a46ae5b2ce216d479405cd66f 206 TIGRFAM TIGR00949 2A76: homoserine/Threonine efflux protein 18 202 6.1E-63 T 15-10-2018 IPR004778 Homoserine/Threonine efflux protein GO:0016021 AM378_11085 59a3f33c0e854c2194fb0522a02a377e 390 SUPERFAMILY SSF53383 7 387 5.51E-99 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM378_11085 59a3f33c0e854c2194fb0522a02a377e 390 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 241 250 - T 15-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 AM378_11085 59a3f33c0e854c2194fb0522a02a377e 390 Gene3D G3DSA:3.90.1150.10 40 386 1.2E-125 T 15-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AM378_11085 59a3f33c0e854c2194fb0522a02a377e 390 Gene3D G3DSA:3.40.640.10 59 293 1.2E-125 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AM378_11085 59a3f33c0e854c2194fb0522a02a377e 390 Pfam PF00155 Aminotransferase class I and II 49 384 1.6E-54 T 15-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AM378_01530 725013102a10233df572c3afaf52e08b 306 Pfam PF05661 Protein of unknown function (DUF808) 4 293 1.6E-117 T 15-10-2018 IPR008526 Inner membrane protein YedI AM378_01530 725013102a10233df572c3afaf52e08b 306 PIRSF PIRSF016660 1 305 6.6E-126 T 15-10-2018 IPR008526 Inner membrane protein YedI AM378_23720 b0ac7203769852771ba94940c1abd7c3 267 SUPERFAMILY SSF46894 19 103 5.1E-14 T 15-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AM378_23720 b0ac7203769852771ba94940c1abd7c3 267 Pfam PF00486 Transcriptional regulatory protein, C terminal 28 102 5.4E-11 T 15-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AM378_23720 b0ac7203769852771ba94940c1abd7c3 267 Gene3D G3DSA:1.10.10.10 2 108 6.4E-15 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_23720 b0ac7203769852771ba94940c1abd7c3 267 SMART SM00862 24 102 2.1E-10 T 15-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AM378_04240 b8189f531639896f7d8e16b0be746e99 192 Pfam PF04264 YceI-like domain 26 187 1.7E-40 T 15-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like AM378_04240 b8189f531639896f7d8e16b0be746e99 192 Gene3D G3DSA:2.40.128.110 24 192 3.6E-55 T 15-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily AM378_04240 b8189f531639896f7d8e16b0be746e99 192 SMART SM00867 25 189 4.1E-70 T 15-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like AM378_04240 b8189f531639896f7d8e16b0be746e99 192 SUPERFAMILY SSF101874 23 190 3.66E-54 T 15-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily AM378_04240 b8189f531639896f7d8e16b0be746e99 192 Hamap MF_00780 Protein YceI [yceI]. 2 192 44.374 T 15-10-2018 IPR023480 Uncharacterised protein family UPF0312/YceI AM378_04290 a1486037efad9edc6c43d393b75efe20 348 Hamap MF_00219 Dihydroorotase [pyrC]. 6 347 46.694 T 15-10-2018 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AM378_04290 a1486037efad9edc6c43d393b75efe20 348 SUPERFAMILY SSF51556 8 346 6.35E-147 T 15-10-2018 IPR032466 Metal-dependent hydrolase AM378_04290 a1486037efad9edc6c43d393b75efe20 348 TIGRFAM TIGR00856 pyrC_dimer: dihydroorotase, homodimeric type 8 347 2.2E-145 T 15-10-2018 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AM378_04290 a1486037efad9edc6c43d393b75efe20 348 ProSitePatterns PS00483 Dihydroorotase signature 2. 249 260 - T 15-10-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AM378_04290 a1486037efad9edc6c43d393b75efe20 348 PIRSF PIRSF001237 4 348 4.7E-143 T 15-10-2018 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AM378_04290 a1486037efad9edc6c43d393b75efe20 348 Gene3D G3DSA:3.20.20.140 6 348 3.0E-105 T 15-10-2018 AM378_04290 a1486037efad9edc6c43d393b75efe20 348 Pfam PF01979 Amidohydrolase family 15 306 2.2E-20 T 15-10-2018 IPR006680 Amidohydrolase-related GO:0016787 AM378_02485 aa2759a363b8582fd8bda1855da85f1e 115 Gene3D G3DSA:3.30.70.100 1 94 2.8E-24 T 15-10-2018 AM378_02485 aa2759a363b8582fd8bda1855da85f1e 115 SUPERFAMILY SSF54909 1 99 1.11E-28 T 15-10-2018 IPR011008 Dimeric alpha-beta barrel AM378_02485 aa2759a363b8582fd8bda1855da85f1e 115 Pfam PF03992 Antibiotic biosynthesis monooxygenase 1 77 1.8E-17 T 15-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain AM378_13030 701789b640203f449309a96b4e39b44c 60 Pfam PF11119 Protein of unknown function (DUF2633) 1 56 1.3E-28 T 15-10-2018 IPR022576 Protein of unknown function DUF2633 AM378_13030 701789b640203f449309a96b4e39b44c 60 ProDom PD053432 MEMBRANE TRANSMEMBRANE YFGG INNER EXPORTED Y1396 PRECURSOR SIGNAL 2 36 2.0E-6 T 15-10-2018 IPR022576 Protein of unknown function DUF2633 AM378_12070 77010f526edeb793fb4fdc44f3b10e14 477 Gene3D G3DSA:1.10.10.10 9 83 2.5E-19 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_12070 77010f526edeb793fb4fdc44f3b10e14 477 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 42 56 2.0E-6 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM378_12070 77010f526edeb793fb4fdc44f3b10e14 477 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 56 72 2.0E-6 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM378_12070 77010f526edeb793fb4fdc44f3b10e14 477 SMART SM00345 23 82 7.3E-15 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM378_12070 77010f526edeb793fb4fdc44f3b10e14 477 SUPERFAMILY SSF46785 14 83 3.68E-17 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM378_12070 77010f526edeb793fb4fdc44f3b10e14 477 Pfam PF00392 Bacterial regulatory proteins, gntR family 21 82 1.4E-15 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM378_12070 77010f526edeb793fb4fdc44f3b10e14 477 Gene3D G3DSA:3.40.640.10 112 470 2.6E-117 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AM378_12070 77010f526edeb793fb4fdc44f3b10e14 477 Pfam PF00155 Aminotransferase class I and II 138 438 1.9E-24 T 15-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AM378_12070 77010f526edeb793fb4fdc44f3b10e14 477 SUPERFAMILY SSF53383 116 474 7.69E-88 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM378_15470 63e8a0c48abbc2391b755067a9a2fb02 287 TIGRFAM TIGR00417 speE: spermidine synthase 7 278 3.5E-116 T 15-10-2018 IPR001045 Spermidine/spermine synthases GO:0003824 KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 AM378_15470 63e8a0c48abbc2391b755067a9a2fb02 287 SUPERFAMILY SSF53335 6 283 1.26E-91 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM378_15470 63e8a0c48abbc2391b755067a9a2fb02 287 Pfam PF01564 Spermine/spermidine synthase domain 60 241 9.2E-68 T 15-10-2018 AM378_15470 63e8a0c48abbc2391b755067a9a2fb02 287 ProSitePatterns PS01330 Polyamine biosynthesis (PABS) domain signature. 81 94 - T 15-10-2018 IPR030373 Polyamine biosynthesis domain, conserved site KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 AM378_15470 63e8a0c48abbc2391b755067a9a2fb02 287 Gene3D G3DSA:2.30.140.10 1 54 1.9E-26 T 15-10-2018 IPR037163 Spermidine synthase, tetramerisation domain superfamily KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 AM378_15470 63e8a0c48abbc2391b755067a9a2fb02 287 Hamap MF_00198 Polyamine aminopropyltransferase [speE]. 6 284 39.47 T 15-10-2018 IPR001045 Spermidine/spermine synthases GO:0003824 KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 AM378_15470 63e8a0c48abbc2391b755067a9a2fb02 287 Pfam PF17284 Spermidine synthase tetramerisation domain 6 57 7.0E-19 T 15-10-2018 IPR035246 Spermidine synthase, tetramerisation domain KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 AM378_15470 63e8a0c48abbc2391b755067a9a2fb02 287 Gene3D G3DSA:3.40.50.150 55 286 4.1E-82 T 15-10-2018 AM378_08335 8a4a80fa2d1fe3c2da231d5626749fcb 282 Pfam PF00551 Formyl transferase 88 264 6.0E-55 T 15-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AM378_08335 8a4a80fa2d1fe3c2da231d5626749fcb 282 SUPERFAMILY SSF53328 88 281 2.49E-59 T 15-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AM378_08335 8a4a80fa2d1fe3c2da231d5626749fcb 282 TIGRFAM TIGR00655 PurU: formyltetrahydrofolate deformylase 10 282 1.7E-130 T 15-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 AM378_08335 8a4a80fa2d1fe3c2da231d5626749fcb 282 Gene3D G3DSA:3.30.70.260 3 83 1.9E-15 T 15-10-2018 AM378_08335 8a4a80fa2d1fe3c2da231d5626749fcb 282 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 88 110 3.2E-69 T 15-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 AM378_08335 8a4a80fa2d1fe3c2da231d5626749fcb 282 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 256 281 3.2E-69 T 15-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 AM378_08335 8a4a80fa2d1fe3c2da231d5626749fcb 282 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 110 137 3.2E-69 T 15-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 AM378_08335 8a4a80fa2d1fe3c2da231d5626749fcb 282 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 11 37 3.2E-69 T 15-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 AM378_08335 8a4a80fa2d1fe3c2da231d5626749fcb 282 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 43 55 3.2E-69 T 15-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 AM378_08335 8a4a80fa2d1fe3c2da231d5626749fcb 282 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 234 256 3.2E-69 T 15-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 AM378_08335 8a4a80fa2d1fe3c2da231d5626749fcb 282 Pfam PF01842 ACT domain 10 70 1.0E-6 T 15-10-2018 IPR002912 ACT domain AM378_08335 8a4a80fa2d1fe3c2da231d5626749fcb 282 SUPERFAMILY SSF55021 8 59 2.5E-8 T 15-10-2018 AM378_08335 8a4a80fa2d1fe3c2da231d5626749fcb 282 Gene3D G3DSA:3.40.50.170 86 282 4.0E-67 T 15-10-2018 AM378_08335 8a4a80fa2d1fe3c2da231d5626749fcb 282 Hamap MF_01927 Formyltetrahydrofolate deformylase [purU]. 6 282 46.022 T 15-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 AM378_08335 8a4a80fa2d1fe3c2da231d5626749fcb 282 PIRSF PIRSF036480 6 282 1.0E-114 T 15-10-2018 AM378_04770 88d441091af6fe2755f3106f365b4b3b 144 SUPERFAMILY SSF55331 1 116 1.36E-5 T 15-10-2018 IPR014347 Tautomerase/MIF superfamily AM378_04770 88d441091af6fe2755f3106f365b4b3b 144 Pfam PF14832 Putative oxalocrotonate tautomerase enzyme 1 135 6.5E-50 T 15-10-2018 IPR028116 Tautomerase, cis-CaaD-like AM378_04770 88d441091af6fe2755f3106f365b4b3b 144 Gene3D G3DSA:3.30.429.10 1 139 5.3E-54 T 15-10-2018 IPR014347 Tautomerase/MIF superfamily AM378_16485 ab4cff58a480c835c02a032ae86103cc 117 Hamap MF_00048 UPF0102 protein YraN [yraN]. 3 115 21.974 T 15-10-2018 IPR003509 Uncharacterised protein family UPF0102 AM378_16485 ab4cff58a480c835c02a032ae86103cc 117 TIGRFAM TIGR00252 TIGR00252: TIGR00252 family protein 4 116 2.1E-39 T 15-10-2018 IPR003509 Uncharacterised protein family UPF0102 AM378_16485 ab4cff58a480c835c02a032ae86103cc 117 Gene3D G3DSA:3.40.1350.10 10 117 3.7E-29 T 15-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 AM378_16485 ab4cff58a480c835c02a032ae86103cc 117 Pfam PF02021 Uncharacterised protein family UPF0102 11 102 1.8E-23 T 15-10-2018 IPR003509 Uncharacterised protein family UPF0102 AM378_16485 ab4cff58a480c835c02a032ae86103cc 117 SUPERFAMILY SSF52980 5 113 1.5E-18 T 15-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 AM378_11435 12e89875f3e537505873eb5ca839a1d6 602 PIRSF PIRSF002741 6 593 8.5E-138 T 15-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 AM378_11435 12e89875f3e537505873eb5ca839a1d6 602 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 99 504 2.9E-69 T 15-10-2018 IPR000914 Solute-binding protein family 5 domain AM378_11435 12e89875f3e537505873eb5ca839a1d6 602 Gene3D G3DSA:3.40.190.10 28 588 2.0E-218 T 15-10-2018 AM378_11435 12e89875f3e537505873eb5ca839a1d6 602 SUPERFAMILY SSF53850 50 591 2.53E-107 T 15-10-2018 AM378_11435 12e89875f3e537505873eb5ca839a1d6 602 Gene3D G3DSA:3.10.105.10 310 568 2.0E-218 T 15-10-2018 AM378_07945 65e26c13c377eac0aefa0294daa5640c 251 Hamap MF_01200_B Orotidine 5'-phosphate decarboxylase [pyrF]. 23 251 39.814 T 15-10-2018 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AM378_07945 65e26c13c377eac0aefa0294daa5640c 251 Gene3D G3DSA:3.20.20.70 11 251 5.2E-85 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM378_07945 65e26c13c377eac0aefa0294daa5640c 251 SMART SM00934 25 246 9.3E-100 T 15-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AM378_07945 65e26c13c377eac0aefa0294daa5640c 251 TIGRFAM TIGR01740 pyrF: orotidine 5'-phosphate decarboxylase 27 247 3.5E-56 T 15-10-2018 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AM378_07945 65e26c13c377eac0aefa0294daa5640c 251 SUPERFAMILY SSF51366 22 249 1.19E-79 T 15-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 AM378_07945 65e26c13c377eac0aefa0294daa5640c 251 ProSitePatterns PS00156 Orotidine 5'-phosphate decarboxylase active site. 77 90 - T 15-10-2018 IPR018089 Orotidine 5'-phosphate decarboxylase, active site GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AM378_07945 65e26c13c377eac0aefa0294daa5640c 251 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 24 246 5.5E-51 T 15-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AM378_09600 e278df653d54d738825eaa80d4012c07 104 Hamap MF_00724 Flagellar hook-basal body complex protein FliE [fliE]. 4 104 17.929 T 15-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 AM378_09600 e278df653d54d738825eaa80d4012c07 104 Pfam PF02049 Flagellar hook-basal body complex protein FliE 20 104 5.1E-29 T 15-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 AM378_09600 e278df653d54d738825eaa80d4012c07 104 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 68 84 1.8E-18 T 15-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 AM378_09600 e278df653d54d738825eaa80d4012c07 104 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 33 49 1.8E-18 T 15-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 AM378_09600 e278df653d54d738825eaa80d4012c07 104 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 89 102 1.8E-18 T 15-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 AM378_09600 e278df653d54d738825eaa80d4012c07 104 TIGRFAM TIGR00205 fliE: flagellar hook-basal body complex protein FliE 2 103 4.3E-28 T 15-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 AM378_10220 5644463272ba8857fb7abac9b4fabed3 471 PRINTS PR00800 Aromatic-L-amino-acid decarboxylase signature 344 359 1.3E-10 T 15-10-2018 IPR010977 Aromatic-L-amino-acid decarboxylase GO:0006520|GO:0016831 AM378_10220 5644463272ba8857fb7abac9b4fabed3 471 PRINTS PR00800 Aromatic-L-amino-acid decarboxylase signature 78 97 1.3E-10 T 15-10-2018 IPR010977 Aromatic-L-amino-acid decarboxylase GO:0006520|GO:0016831 AM378_10220 5644463272ba8857fb7abac9b4fabed3 471 PRINTS PR00800 Aromatic-L-amino-acid decarboxylase signature 117 136 1.3E-10 T 15-10-2018 IPR010977 Aromatic-L-amino-acid decarboxylase GO:0006520|GO:0016831 AM378_10220 5644463272ba8857fb7abac9b4fabed3 471 PRINTS PR00800 Aromatic-L-amino-acid decarboxylase signature 387 406 1.3E-10 T 15-10-2018 IPR010977 Aromatic-L-amino-acid decarboxylase GO:0006520|GO:0016831 AM378_10220 5644463272ba8857fb7abac9b4fabed3 471 Gene3D G3DSA:3.40.640.10 105 349 1.0E-108 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AM378_10220 5644463272ba8857fb7abac9b4fabed3 471 Pfam PF00282 Pyridoxal-dependent decarboxylase conserved domain 48 405 6.1E-42 T 15-10-2018 IPR002129 Pyridoxal phosphate-dependent decarboxylase GO:0016831|GO:0019752|GO:0030170 AM378_10220 5644463272ba8857fb7abac9b4fabed3 471 Gene3D G3DSA:3.90.1150.170 41 457 1.0E-108 T 15-10-2018 AM378_10220 5644463272ba8857fb7abac9b4fabed3 471 SUPERFAMILY SSF53383 8 468 9.76E-98 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM378_09850 8445cd764d49b6c532ede940810cea54 344 Pfam PF00107 Zinc-binding dehydrogenase 161 299 1.4E-19 T 15-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AM378_09850 8445cd764d49b6c532ede940810cea54 344 SUPERFAMILY SSF51735 126 307 1.01E-46 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily AM378_09850 8445cd764d49b6c532ede940810cea54 344 Pfam PF16884 N-terminal domain of oxidoreductase 9 115 4.4E-41 T 15-10-2018 AM378_09850 8445cd764d49b6c532ede940810cea54 344 SUPERFAMILY SSF50129 293 340 3.91E-6 T 15-10-2018 IPR011032 GroES-like superfamily AM378_09850 8445cd764d49b6c532ede940810cea54 344 SUPERFAMILY SSF50129 7 146 3.86E-43 T 15-10-2018 IPR011032 GroES-like superfamily AM378_09850 8445cd764d49b6c532ede940810cea54 344 Gene3D G3DSA:3.40.50.720 130 311 2.1E-134 T 15-10-2018 AM378_09850 8445cd764d49b6c532ede940810cea54 344 Gene3D G3DSA:3.90.180.10 19 339 2.1E-134 T 15-10-2018 AM378_09850 8445cd764d49b6c532ede940810cea54 344 SMART SM00829 23 339 1.9E-5 T 15-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AM378_00695 8847e60429cb6ef392b1bad4012f94a7 220 Pfam PF01467 Cytidylyltransferase-like 14 194 1.1E-33 T 15-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 AM378_00695 8847e60429cb6ef392b1bad4012f94a7 220 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 13 75 6.2E-11 T 15-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 AM378_00695 8847e60429cb6ef392b1bad4012f94a7 220 TIGRFAM TIGR00482 TIGR00482: nicotinate (nicotinamide) nucleotide adenylyltransferase 14 219 7.1E-59 T 15-10-2018 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 AM378_00695 8847e60429cb6ef392b1bad4012f94a7 220 SUPERFAMILY SSF52374 11 220 1.81E-57 T 15-10-2018 AM378_00695 8847e60429cb6ef392b1bad4012f94a7 220 Hamap MF_00244 Probable nicotinate-nucleotide adenylyltransferase [nadD]. 10 220 31.517 T 15-10-2018 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 AM378_00695 8847e60429cb6ef392b1bad4012f94a7 220 Gene3D G3DSA:3.40.50.620 10 220 7.8E-66 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM378_09370 fb70b1d96d8e5eef078c4639431f4c64 155 Pfam PF06891 P2 phage tail completion protein R (GpR) 1 130 2.4E-43 T 15-10-2018 IPR009678 Bacteriophage tail completion protein R AM378_09705 2e1a8836b3c0b4acca15781ae3ce323b 260 TIGRFAM TIGR02488 flgG_G_neg: flagellar basal-body rod protein FlgG 4 259 1.2E-120 T 15-10-2018 IPR012834 Flagellar basal-body rod FlgG GO:0009426|GO:0071973 AM378_09705 2e1a8836b3c0b4acca15781ae3ce323b 260 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 11 31 - T 15-10-2018 IPR019776 Flagellar basal body rod protein, conserved site AM378_09705 2e1a8836b3c0b4acca15781ae3ce323b 260 SUPERFAMILY SSF117143 93 222 1.05E-35 T 15-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like AM378_09705 2e1a8836b3c0b4acca15781ae3ce323b 260 Pfam PF00460 Flagella basal body rod protein 5 35 8.8E-14 T 15-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 AM378_09705 2e1a8836b3c0b4acca15781ae3ce323b 260 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 145 243 6.6E-30 T 15-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G AM378_09705 2e1a8836b3c0b4acca15781ae3ce323b 260 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 136 3.3E-49 T 15-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G AM378_09705 2e1a8836b3c0b4acca15781ae3ce323b 260 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 182 260 1.3E-26 T 15-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain AM378_19940 72104c0bee7bebfdba623c36153ba22a 370 PRINTS PR00735 Glycosyl hydrolase family 8 signature 216 227 1.9E-20 T 15-10-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 AM378_19940 72104c0bee7bebfdba623c36153ba22a 370 PRINTS PR00735 Glycosyl hydrolase family 8 signature 115 133 1.9E-20 T 15-10-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 AM378_19940 72104c0bee7bebfdba623c36153ba22a 370 PRINTS PR00735 Glycosyl hydrolase family 8 signature 53 66 1.9E-20 T 15-10-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 AM378_19940 72104c0bee7bebfdba623c36153ba22a 370 PRINTS PR00735 Glycosyl hydrolase family 8 signature 180 197 1.9E-20 T 15-10-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 AM378_19940 72104c0bee7bebfdba623c36153ba22a 370 PRINTS PR00735 Glycosyl hydrolase family 8 signature 241 250 1.9E-20 T 15-10-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 AM378_19940 72104c0bee7bebfdba623c36153ba22a 370 PRINTS PR00735 Glycosyl hydrolase family 8 signature 333 347 1.9E-20 T 15-10-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 AM378_19940 72104c0bee7bebfdba623c36153ba22a 370 SUPERFAMILY SSF48208 8 352 3.34E-101 T 15-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 AM378_19940 72104c0bee7bebfdba623c36153ba22a 370 Gene3D G3DSA:1.50.10.10 23 362 5.9E-138 T 15-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 AM378_19940 72104c0bee7bebfdba623c36153ba22a 370 Pfam PF01270 Glycosyl hydrolases family 8 11 347 2.8E-95 T 15-10-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 AM378_08325 7c86ef2459d90a431bb9cd5a228bd3b5 300 Pfam PF01734 Patatin-like phospholipase 8 165 3.3E-21 T 15-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 AM378_08325 7c86ef2459d90a431bb9cd5a228bd3b5 300 SUPERFAMILY SSF52151 1 294 1.67E-53 T 15-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase AM378_08325 7c86ef2459d90a431bb9cd5a228bd3b5 300 Gene3D G3DSA:3.40.1090.10 1 105 1.2E-19 T 15-10-2018 AM378_08325 7c86ef2459d90a431bb9cd5a228bd3b5 300 Gene3D G3DSA:3.40.1090.10 106 198 3.6E-13 T 15-10-2018 AM378_19055 14bd944dfd2c82b5c39dab09bf6fa5db 403 TIGRFAM TIGR00210 gltS: sodium/glutamate symporter 2 397 5.1E-189 T 15-10-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 AM378_19055 14bd944dfd2c82b5c39dab09bf6fa5db 403 Hamap MF_02062 Sodium/glutamate symporter [gltS]. 2 397 24.843 T 15-10-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 AM378_19055 14bd944dfd2c82b5c39dab09bf6fa5db 403 Pfam PF03616 Sodium/glutamate symporter 2 366 3.8E-159 T 15-10-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 AM378_03910 3b415a1c9f894bb480e348a23e211bfc 437 Pfam PF07690 Major Facilitator Superfamily 27 387 3.5E-37 T 15-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM378_03910 3b415a1c9f894bb480e348a23e211bfc 437 SUPERFAMILY SSF103473 14 432 5.36E-72 T 15-10-2018 IPR036259 MFS transporter superfamily AM378_03910 3b415a1c9f894bb480e348a23e211bfc 437 Gene3D G3DSA:1.20.1250.20 8 433 3.7E-62 T 15-10-2018 AM378_21620 1fc018dae8dda47241d69f6f33d71267 311 Gene3D G3DSA:3.40.50.1370 135 292 3.5E-124 T 15-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 AM378_21620 1fc018dae8dda47241d69f6f33d71267 311 Hamap MF_00001 Aspartate carbamoyltransferase [pyrB]. 7 307 38.279 T 15-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AM378_21620 1fc018dae8dda47241d69f6f33d71267 311 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 49 56 - T 15-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AM378_21620 1fc018dae8dda47241d69f6f33d71267 311 TIGRFAM TIGR00670 asp_carb_tr: aspartate carbamoyltransferase 8 305 3.8E-121 T 15-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AM378_21620 1fc018dae8dda47241d69f6f33d71267 311 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 8 148 3.9E-47 T 15-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 AM378_21620 1fc018dae8dda47241d69f6f33d71267 311 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 155 303 1.2E-27 T 15-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 AM378_21620 1fc018dae8dda47241d69f6f33d71267 311 PRINTS PR00101 Aspartate carbamoyltransferase signature 39 61 3.6E-36 T 15-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AM378_21620 1fc018dae8dda47241d69f6f33d71267 311 PRINTS PR00101 Aspartate carbamoyltransferase signature 79 88 3.6E-36 T 15-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AM378_21620 1fc018dae8dda47241d69f6f33d71267 311 PRINTS PR00101 Aspartate carbamoyltransferase signature 226 235 3.6E-36 T 15-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AM378_21620 1fc018dae8dda47241d69f6f33d71267 311 PRINTS PR00101 Aspartate carbamoyltransferase signature 134 151 3.6E-36 T 15-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AM378_21620 1fc018dae8dda47241d69f6f33d71267 311 PRINTS PR00101 Aspartate carbamoyltransferase signature 286 300 3.6E-36 T 15-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AM378_21620 1fc018dae8dda47241d69f6f33d71267 311 PRINTS PR00101 Aspartate carbamoyltransferase signature 264 269 3.6E-36 T 15-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AM378_21620 1fc018dae8dda47241d69f6f33d71267 311 Gene3D G3DSA:3.40.50.1370 8 304 3.5E-124 T 15-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 AM378_21620 1fc018dae8dda47241d69f6f33d71267 311 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 260 269 4.4E-25 T 15-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AM378_21620 1fc018dae8dda47241d69f6f33d71267 311 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 270 293 4.4E-25 T 15-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AM378_21620 1fc018dae8dda47241d69f6f33d71267 311 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 49 68 4.4E-25 T 15-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AM378_21620 1fc018dae8dda47241d69f6f33d71267 311 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 135 146 4.4E-25 T 15-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AM378_21620 1fc018dae8dda47241d69f6f33d71267 311 SUPERFAMILY SSF53671 4 306 7.98E-100 T 15-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 AM378_10735 b7172e7fc6632c3b279d8e926f7d0b27 195 SUPERFAMILY SSF55469 10 188 5.89E-41 T 15-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 AM378_10735 b7172e7fc6632c3b279d8e926f7d0b27 195 Gene3D G3DSA:3.40.109.10 3 191 1.5E-41 T 15-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 AM378_10735 b7172e7fc6632c3b279d8e926f7d0b27 195 Pfam PF00881 Nitroreductase family 81 160 1.7E-5 T 15-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 AM378_10735 b7172e7fc6632c3b279d8e926f7d0b27 195 Pfam PF00881 Nitroreductase family 17 56 1.6E-8 T 15-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 AM378_15560 9e39e4e316cf3c6c8bc297226fd80f62 243 SUPERFAMILY SSF75217 75 242 6.8E-52 T 15-10-2018 IPR029028 Alpha/beta knot methyltransferases AM378_15560 9e39e4e316cf3c6c8bc297226fd80f62 243 Gene3D G3DSA:3.40.1280.10 74 243 3.0E-65 T 15-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AM378_15560 9e39e4e316cf3c6c8bc297226fd80f62 243 SUPERFAMILY SSF88697 2 67 1.99E-16 T 15-10-2018 IPR015947 PUA-like superfamily AM378_15560 9e39e4e316cf3c6c8bc297226fd80f62 243 PIRSF PIRSF015601 2 242 7.8E-52 T 15-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 AM378_15560 9e39e4e316cf3c6c8bc297226fd80f62 243 Gene3D G3DSA:2.40.240.20 1 73 5.4E-23 T 15-10-2018 AM378_15560 9e39e4e316cf3c6c8bc297226fd80f62 243 Pfam PF04452 RNA methyltransferase 19 236 7.8E-71 T 15-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 AM378_15560 9e39e4e316cf3c6c8bc297226fd80f62 243 TIGRFAM TIGR00046 TIGR00046: RNA methyltransferase, RsmE family 2 242 3.0E-86 T 15-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 AM378_06780 f882accfa647b995e412ceb7aee8dd82 479 SUPERFAMILY SSF55486 10 254 6.07E-70 T 15-10-2018 AM378_06780 f882accfa647b995e412ceb7aee8dd82 479 Gene3D G3DSA:2.150.10.10 261 470 1.4E-191 T 15-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal AM378_06780 f882accfa647b995e412ceb7aee8dd82 479 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 364 382 - T 15-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site AM378_06780 f882accfa647b995e412ceb7aee8dd82 479 Pfam PF08548 Peptidase M10 serralysin C terminal 256 479 3.0E-83 T 15-10-2018 IPR013858 Peptidase M10 serralysin, C-terminal GO:0005509|GO:0005615 AM378_06780 f882accfa647b995e412ceb7aee8dd82 479 PIRSF PIRSF001205 1 479 1.4E-213 T 15-10-2018 IPR016294 Peptidase M10B GO:0004222|GO:0005509|GO:0005615|GO:0006508|GO:0008270 AM378_06780 f882accfa647b995e412ceb7aee8dd82 479 SMART SM00235 48 240 9.7E-27 T 15-10-2018 IPR006026 Peptidase, metallopeptidase GO:0006508|GO:0008237|GO:0008270 AM378_06780 f882accfa647b995e412ceb7aee8dd82 479 Gene3D G3DSA:3.40.390.10 24 260 1.4E-191 T 15-10-2018 IPR024079 Metallopeptidase, catalytic domain superfamily GO:0008237 AM378_06780 f882accfa647b995e412ceb7aee8dd82 479 SUPERFAMILY SSF51120 257 476 1.7E-49 T 15-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal AM378_06780 f882accfa647b995e412ceb7aee8dd82 479 PRINTS PR00313 NodO calcium binding signature 359 367 1.7E-12 T 15-10-2018 AM378_06780 f882accfa647b995e412ceb7aee8dd82 479 PRINTS PR00313 NodO calcium binding signature 368 376 1.7E-12 T 15-10-2018 AM378_06780 f882accfa647b995e412ceb7aee8dd82 479 PRINTS PR00313 NodO calcium binding signature 338 349 1.7E-12 T 15-10-2018 AM378_06780 f882accfa647b995e412ceb7aee8dd82 479 PRINTS PR00313 NodO calcium binding signature 377 386 1.7E-12 T 15-10-2018 AM378_17890 fbd9e5901e8142083fb84e699b269c44 87 SUPERFAMILY SSF47598 2 70 5.34E-19 T 15-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 AM378_17890 fbd9e5901e8142083fb84e699b269c44 87 Gene3D G3DSA:1.10.1220.10 10 59 7.0E-13 T 15-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 AM378_21190 9bf2bd1bd0c966299e211062d8c1c2ec 566 Pfam PF07244 Surface antigen variable number repeat 178 241 5.6E-8 T 15-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 AM378_21190 9bf2bd1bd0c966299e211062d8c1c2ec 566 Gene3D G3DSA:2.40.160.50 255 566 3.0E-123 T 15-10-2018 AM378_21190 9bf2bd1bd0c966299e211062d8c1c2ec 566 Pfam PF01103 Surface antigen 283 563 7.5E-31 T 15-10-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 AM378_21190 9bf2bd1bd0c966299e211062d8c1c2ec 566 Gene3D G3DSA:3.10.20.310 90 177 7.5E-31 T 15-10-2018 AM378_21190 9bf2bd1bd0c966299e211062d8c1c2ec 566 Pfam PF17243 POTRA domain TamA domain 1 14 88 1.4E-20 T 15-10-2018 IPR035243 TamA, POTRA domain 1 AM378_21190 9bf2bd1bd0c966299e211062d8c1c2ec 566 Gene3D G3DSA:3.10.20.310 9 89 9.6E-30 T 15-10-2018 AM378_21190 9bf2bd1bd0c966299e211062d8c1c2ec 566 Gene3D G3DSA:3.10.20.310 178 254 3.8E-26 T 15-10-2018 AM378_21760 eb2b43919422563b776e641eedf4d41a 2106 Pfam PF00271 Helicase conserved C-terminal domain 1081 1145 5.5E-10 T 15-10-2018 IPR001650 Helicase, C-terminal AM378_21760 eb2b43919422563b776e641eedf4d41a 2106 SUPERFAMILY SSF52540 157 1160 3.69E-29 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_21760 eb2b43919422563b776e641eedf4d41a 2106 Gene3D G3DSA:3.40.50.300 1043 1208 1.5E-17 T 15-10-2018 AM378_21760 eb2b43919422563b776e641eedf4d41a 2106 SMART SM00490 1064 1146 1.4E-10 T 15-10-2018 IPR001650 Helicase, C-terminal AM378_21760 eb2b43919422563b776e641eedf4d41a 2106 Gene3D G3DSA:3.40.50.300 81 320 1.2E-37 T 15-10-2018 AM378_21760 eb2b43919422563b776e641eedf4d41a 2106 SMART SM00487 99 331 6.5E-22 T 15-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AM378_21760 eb2b43919422563b776e641eedf4d41a 2106 Pfam PF00270 DEAD/DEAH box helicase 106 311 3.2E-19 T 15-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AM378_21760 eb2b43919422563b776e641eedf4d41a 2106 Pfam PF09369 Domain of unknown function (DUF1998) 1623 1703 2.2E-7 T 15-10-2018 IPR018973 DEAD/DEAH-box helicase, putative AM378_09245 e5761244fd179aa37a1451d57d7eb2c1 522 Gene3D G3DSA:3.90.76.10 50 202 5.8E-93 T 15-10-2018 AM378_09245 e5761244fd179aa37a1451d57d7eb2c1 522 Gene3D G3DSA:3.40.190.10 203 508 5.8E-93 T 15-10-2018 AM378_09245 e5761244fd179aa37a1451d57d7eb2c1 522 PIRSF PIRSF002741 2 518 1.7E-60 T 15-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 AM378_09245 e5761244fd179aa37a1451d57d7eb2c1 522 SUPERFAMILY SSF53850 22 517 2.58E-97 T 15-10-2018 AM378_09245 e5761244fd179aa37a1451d57d7eb2c1 522 Gene3D G3DSA:3.10.105.10 284 498 5.8E-93 T 15-10-2018 AM378_09245 e5761244fd179aa37a1451d57d7eb2c1 522 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 72 437 4.6E-64 T 15-10-2018 IPR000914 Solute-binding protein family 5 domain AM378_23470 02a2271e039b569bd352e87e474f7ca4 746 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 47 746 1.5E-138 T 15-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 AM378_23470 02a2271e039b569bd352e87e474f7ca4 746 Gene3D G3DSA:2.40.170.20 161 746 1.1E-57 T 15-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AM378_23470 02a2271e039b569bd352e87e474f7ca4 746 Pfam PF07715 TonB-dependent Receptor Plug Domain 46 147 1.5E-18 T 15-10-2018 IPR012910 TonB-dependent receptor, plug domain AM378_23470 02a2271e039b569bd352e87e474f7ca4 746 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 729 746 - T 15-10-2018 IPR010917 TonB-dependent receptor, conserved site AM378_23470 02a2271e039b569bd352e87e474f7ca4 746 Pfam PF00593 TonB dependent receptor 241 743 6.5E-30 T 15-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel AM378_23470 02a2271e039b569bd352e87e474f7ca4 746 Gene3D G3DSA:2.170.130.10 31 153 1.9E-23 T 15-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily AM378_23470 02a2271e039b569bd352e87e474f7ca4 746 SUPERFAMILY SSF56935 32 744 1.32E-97 T 15-10-2018 AM378_05860 95da969d65eb6586f4cdd20801370116 614 SUPERFAMILY SSF51120 354 436 4.71E-9 T 15-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal AM378_05860 95da969d65eb6586f4cdd20801370116 614 SUPERFAMILY SSF53474 131 264 3.46E-13 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold AM378_05860 95da969d65eb6586f4cdd20801370116 614 PRINTS PR00313 NodO calcium binding signature 509 517 1.2E-8 T 15-10-2018 AM378_05860 95da969d65eb6586f4cdd20801370116 614 PRINTS PR00313 NodO calcium binding signature 380 391 1.2E-8 T 15-10-2018 AM378_05860 95da969d65eb6586f4cdd20801370116 614 PRINTS PR00313 NodO calcium binding signature 491 499 1.2E-8 T 15-10-2018 AM378_05860 95da969d65eb6586f4cdd20801370116 614 PRINTS PR00313 NodO calcium binding signature 528 537 1.2E-8 T 15-10-2018 AM378_05860 95da969d65eb6586f4cdd20801370116 614 Gene3D G3DSA:2.150.10.10 328 484 2.3E-66 T 15-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal AM378_05860 95da969d65eb6586f4cdd20801370116 614 Gene3D G3DSA:2.150.10.10 487 614 1.1E-30 T 15-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal AM378_05860 95da969d65eb6586f4cdd20801370116 614 SUPERFAMILY SSF51120 483 612 6.93E-15 T 15-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal AM378_05860 95da969d65eb6586f4cdd20801370116 614 Gene3D G3DSA:3.40.50.1820 1 327 4.5E-133 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold AM378_03005 813c779e97697bde95a291c72fe2dbfa 305 SUPERFAMILY SSF49401 172 302 6.46E-12 T 15-10-2018 IPR008966 Adhesion domain superfamily AM378_03005 813c779e97697bde95a291c72fe2dbfa 305 Gene3D G3DSA:2.60.40.1090 9 175 1.3E-26 T 15-10-2018 IPR036937 Fimbrial-type adhesion domain superfamily GO:0007155|GO:0009289 AM378_03005 813c779e97697bde95a291c72fe2dbfa 305 SUPERFAMILY SSF49401 10 170 2.73E-5 T 15-10-2018 IPR008966 Adhesion domain superfamily AM378_03005 813c779e97697bde95a291c72fe2dbfa 305 Gene3D G3DSA:2.60.40.1090 176 303 8.4E-21 T 15-10-2018 IPR036937 Fimbrial-type adhesion domain superfamily GO:0007155|GO:0009289 AM378_03005 813c779e97697bde95a291c72fe2dbfa 305 Pfam PF00419 Fimbrial protein 170 302 1.6E-10 T 15-10-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM378_03005 813c779e97697bde95a291c72fe2dbfa 305 Pfam PF09160 FimH, mannose binding 11 159 1.3E-9 T 15-10-2018 IPR015243 FimH, mannose-binding domain AM378_11760 85e1a68e00e0983cb5aed63fc24d4b55 185 Gene3D G3DSA:1.20.120.1200 1 159 3.6E-47 T 15-10-2018 AM378_11760 85e1a68e00e0983cb5aed63fc24d4b55 185 Pfam PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 16 157 6.7E-33 T 15-10-2018 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM378_01295 3464eaa9c707c2479c7ae0a573892502 160 SUPERFAMILY SSF49777 3 160 1.57E-53 T 15-10-2018 IPR036610 PEBP-like superfamily AM378_01295 3464eaa9c707c2479c7ae0a573892502 160 Pfam PF01161 Phosphatidylethanolamine-binding protein 27 159 1.7E-38 T 15-10-2018 IPR008914 Phosphatidylethanolamine-binding protein AM378_01295 3464eaa9c707c2479c7ae0a573892502 160 Gene3D G3DSA:3.90.280.10 1 160 3.4E-56 T 15-10-2018 IPR036610 PEBP-like superfamily AM378_01295 3464eaa9c707c2479c7ae0a573892502 160 TIGRFAM TIGR00481 TIGR00481: Raf kinase inhibitor-like protein, YbhB/YbcL family 21 157 2.7E-52 T 15-10-2018 IPR005247 YbhB/YbcL AM378_04105 ad3c556c63230eb98ce445d271e1df07 645 Pfam PF02687 FtsX-like permease family 550 638 2.8E-11 T 15-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 AM378_04105 ad3c556c63230eb98ce445d271e1df07 645 SUPERFAMILY SSF52540 4 226 2.73E-69 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_04105 ad3c556c63230eb98ce445d271e1df07 645 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM378_04105 ad3c556c63230eb98ce445d271e1df07 645 Pfam PF00005 ABC transporter 24 172 2.0E-29 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM378_04105 ad3c556c63230eb98ce445d271e1df07 645 Pfam PF12704 MacB-like periplasmic core domain 271 487 3.1E-35 T 15-10-2018 IPR025857 MacB-like periplasmic core domain AM378_04105 ad3c556c63230eb98ce445d271e1df07 645 Gene3D G3DSA:3.40.50.300 1 272 6.5E-67 T 15-10-2018 AM378_04105 ad3c556c63230eb98ce445d271e1df07 645 SMART SM00382 33 220 7.8E-12 T 15-10-2018 IPR003593 AAA+ ATPase domain AM378_18175 1c9f1deb3b954bcbc498c09dc1ce6306 95 Pfam PF04703 FaeA-like protein 42 71 8.6E-5 T 15-10-2018 IPR006793 FaeA-like protein GO:0006355|GO:0009289 AM378_18175 1c9f1deb3b954bcbc498c09dc1ce6306 95 Gene3D G3DSA:1.10.10.10 34 84 4.3E-12 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_09700 ca83d4a69ca8815ffd13e451d8d0e62b 233 PRINTS PR01008 Flagellar L-ring protein signature 147 162 7.8E-35 T 15-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 AM378_09700 ca83d4a69ca8815ffd13e451d8d0e62b 233 PRINTS PR01008 Flagellar L-ring protein signature 74 86 7.8E-35 T 15-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 AM378_09700 ca83d4a69ca8815ffd13e451d8d0e62b 233 PRINTS PR01008 Flagellar L-ring protein signature 173 189 7.8E-35 T 15-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 AM378_09700 ca83d4a69ca8815ffd13e451d8d0e62b 233 PRINTS PR01008 Flagellar L-ring protein signature 194 208 7.8E-35 T 15-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 AM378_09700 ca83d4a69ca8815ffd13e451d8d0e62b 233 PRINTS PR01008 Flagellar L-ring protein signature 210 224 7.8E-35 T 15-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 AM378_09700 ca83d4a69ca8815ffd13e451d8d0e62b 233 Hamap MF_00415 Flagellar L-ring protein [flgH]. 5 231 27.151 T 15-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 AM378_09700 ca83d4a69ca8815ffd13e451d8d0e62b 233 Pfam PF02107 Flagellar L-ring protein 48 232 5.2E-60 T 15-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 AM378_13625 fd78687b6ca249f1f4e46f9ab04c1df2 217 PIRSF PIRSF016938 1 205 1.3E-33 T 15-10-2018 IPR026279 Sigma-E factor negative regulatory protein RseA GO:0016989 AM378_13625 fd78687b6ca249f1f4e46f9ab04c1df2 217 Pfam PF03873 Anti sigma-E protein RseA, C-terminal domain 132 187 6.3E-24 T 15-10-2018 IPR005573 Anti sigma-E protein RseA, C-terminal AM378_13625 fd78687b6ca249f1f4e46f9ab04c1df2 217 Pfam PF03872 Anti sigma-E protein RseA, N-terminal domain 1 87 5.6E-37 T 15-10-2018 IPR005572 Anti sigma-E protein RseA, N-terminal GO:0016989 AM378_13625 fd78687b6ca249f1f4e46f9ab04c1df2 217 SUPERFAMILY SSF89069 1 66 8.11E-21 T 15-10-2018 IPR036147 Anti sigma-E protein RseA, N-terminal domain superfamily GO:0016989 AM378_13625 fd78687b6ca249f1f4e46f9ab04c1df2 217 Gene3D G3DSA:1.10.10.880 1 66 5.7E-28 T 15-10-2018 IPR036147 Anti sigma-E protein RseA, N-terminal domain superfamily GO:0016989 AM378_24045 a86be5cd896dc3bdf1b81061653268c7 66 Gene3D G3DSA:3.30.730.30 3 66 8.6E-28 T 15-10-2018 IPR038462 YaiA-like superfamily AM378_24045 a86be5cd896dc3bdf1b81061653268c7 66 Pfam PF16362 YaiA protein 6 62 6.5E-21 T 15-10-2018 IPR032303 YaiA protein AM378_14540 5f04a5efaf929a9b1702fb9d18ecd8d3 394 Gene3D G3DSA:1.20.1250.20 9 390 8.9E-25 T 15-10-2018 AM378_14540 5f04a5efaf929a9b1702fb9d18ecd8d3 394 Hamap MF_01585 Lysophospholipid transporter LplT [lplT]. 1 394 40.318 T 15-10-2018 IPR023727 Lysophospholipid transporter LplT GO:0005886|GO:0051977|GO:0051978 AM378_14540 5f04a5efaf929a9b1702fb9d18ecd8d3 394 Pfam PF07690 Major Facilitator Superfamily 18 352 2.4E-17 T 15-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM378_14540 5f04a5efaf929a9b1702fb9d18ecd8d3 394 SUPERFAMILY SSF103473 13 390 3.14E-24 T 15-10-2018 IPR036259 MFS transporter superfamily AM378_01975 d7b6eb29a656de2a44413041d259b53a 60 Pfam PF06568 Domain of unknown function (DUF1127) 18 50 1.1E-10 T 15-10-2018 IPR009506 Protein of unknown function DUF1127 AM378_09840 a0529fd289de7a81598306e681869aab 71 Gene3D G3DSA:1.20.1280.40 1 71 1.7E-28 T 15-10-2018 IPR036666 HHA superfamily AM378_09840 a0529fd289de7a81598306e681869aab 71 Pfam PF05321 Haemolysin expression modulating protein 9 67 1.9E-29 T 15-10-2018 IPR007985 Haemolysin expression modulating, HHA AM378_09840 a0529fd289de7a81598306e681869aab 71 SUPERFAMILY SSF68989 4 69 1.12E-20 T 15-10-2018 IPR036666 HHA superfamily AM378_11520 729b3fe8ed4b11e6e0aaaff2d6c686c7 449 Gene3D G3DSA:1.20.1250.20 16 228 5.4E-43 T 15-10-2018 AM378_11520 729b3fe8ed4b11e6e0aaaff2d6c686c7 449 SUPERFAMILY SSF103473 7 431 8.37E-85 T 15-10-2018 IPR036259 MFS transporter superfamily AM378_11520 729b3fe8ed4b11e6e0aaaff2d6c686c7 449 Gene3D G3DSA:1.20.1250.20 248 439 1.3E-27 T 15-10-2018 AM378_11520 729b3fe8ed4b11e6e0aaaff2d6c686c7 449 Pfam PF07690 Major Facilitator Superfamily 28 287 5.3E-36 T 15-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM378_11725 9ae1112723f7e6dd963b22837697b9b2 169 Pfam PF06496 Protein of unknown function (DUF1097) 8 141 2.0E-36 T 15-10-2018 IPR009476 Protein of unknown function DUF1097 AM378_05385 7dd5647eb83cf675091cadec3139e07e 336 Gene3D G3DSA:3.40.190.10 48 304 3.0E-107 T 15-10-2018 AM378_05385 7dd5647eb83cf675091cadec3139e07e 336 SUPERFAMILY SSF53850 21 332 2.17E-52 T 15-10-2018 AM378_05385 7dd5647eb83cf675091cadec3139e07e 336 Pfam PF01547 Bacterial extracellular solute-binding protein 43 277 2.6E-22 T 15-10-2018 IPR006059 Bacterial extracellular solute-binding protein AM378_05385 7dd5647eb83cf675091cadec3139e07e 336 TIGRFAM TIGR03227 PhnS: 2-aminoethylphosphonate ABC transporter, 2-aminoethylphosphonate binding protein 15 333 6.4E-141 T 15-10-2018 IPR017637 Putative 2-aminoethylphosphonate binding protein, ABC transporter AM378_05385 7dd5647eb83cf675091cadec3139e07e 336 Gene3D G3DSA:3.40.190.10 123 328 3.0E-107 T 15-10-2018 AM378_08370 9fddc3406fdc1823a9e022e4c53c507f 268 ProSitePatterns PS00726 AP endonucleases family 1 signature 1. 27 36 - T 15-10-2018 IPR020847 AP endonuclease 1, binding site GO:0003677|GO:0004519|GO:0005622|GO:0006281 AM378_08370 9fddc3406fdc1823a9e022e4c53c507f 268 Gene3D G3DSA:3.60.10.10 1 267 9.7E-85 T 15-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily AM378_08370 9fddc3406fdc1823a9e022e4c53c507f 268 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 1 266 2.6E-90 T 15-10-2018 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 AM378_08370 9fddc3406fdc1823a9e022e4c53c507f 268 ProSitePatterns PS00727 AP endonucleases family 1 signature 2. 197 213 - T 15-10-2018 IPR020848 AP endonuclease 1, conserved site GO:0003677|GO:0004519|GO:0005622|GO:0006281 Reactome: R-HSA-110357|Reactome: R-HSA-110362|Reactome: R-HSA-110373|Reactome: R-HSA-5651801|Reactome: R-HSA-73930|Reactome: R-HSA-73933 AM378_08370 9fddc3406fdc1823a9e022e4c53c507f 268 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 1 266 1.6E-105 T 15-10-2018 AM378_08370 9fddc3406fdc1823a9e022e4c53c507f 268 ProSitePatterns PS00728 AP endonucleases family 1 signature 3. 223 234 - T 15-10-2018 IPR020848 AP endonuclease 1, conserved site GO:0003677|GO:0004519|GO:0005622|GO:0006281 Reactome: R-HSA-110357|Reactome: R-HSA-110362|Reactome: R-HSA-110373|Reactome: R-HSA-5651801|Reactome: R-HSA-73930|Reactome: R-HSA-73933 AM378_08370 9fddc3406fdc1823a9e022e4c53c507f 268 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 4 259 4.5E-22 T 15-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase AM378_08370 9fddc3406fdc1823a9e022e4c53c507f 268 SUPERFAMILY SSF56219 1 267 6.41E-89 T 15-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily AM378_23185 96848f80c80448b6d023c30b9ae9741e 323 Pfam PF00248 Aldo/keto reductase family 15 312 2.3E-77 T 15-10-2018 IPR023210 NADP-dependent oxidoreductase domain AM378_23185 96848f80c80448b6d023c30b9ae9741e 323 PRINTS PR00069 Aldo-keto reductase signature 111 129 1.1E-5 T 15-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AM378_23185 96848f80c80448b6d023c30b9ae9741e 323 PRINTS PR00069 Aldo-keto reductase signature 45 69 1.1E-5 T 15-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AM378_23185 96848f80c80448b6d023c30b9ae9741e 323 PRINTS PR00069 Aldo-keto reductase signature 142 159 1.1E-5 T 15-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AM378_23185 96848f80c80448b6d023c30b9ae9741e 323 Gene3D G3DSA:3.20.20.100 1 322 1.6E-118 T 15-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily AM378_23185 96848f80c80448b6d023c30b9ae9741e 323 SUPERFAMILY SSF51430 1 313 3.93E-100 T 15-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily AM378_14490 0e4be8d19d5e66e2c4e6fb9abd0cdac7 192 PIRSF PIRSF004525 1 191 3.0E-49 T 15-10-2018 IPR016419 Prepilin peptidase-dependent protein B, predicted AM378_14490 0e4be8d19d5e66e2c4e6fb9abd0cdac7 192 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 6 28 4.0E-5 T 15-10-2018 IPR012902 Prokaryotic N-terminal methylation site AM378_14490 0e4be8d19d5e66e2c4e6fb9abd0cdac7 192 Pfam PF07963 Prokaryotic N-terminal methylation motif 5 27 2.9E-5 T 15-10-2018 IPR012902 Prokaryotic N-terminal methylation site AM378_14490 0e4be8d19d5e66e2c4e6fb9abd0cdac7 192 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 6 26 - T 15-10-2018 IPR012902 Prokaryotic N-terminal methylation site AM378_21745 e977c84810d55374f633abdec49b6a43 529 Pfam PF02384 N-6 DNA Methylase 123 449 4.3E-101 T 15-10-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 AM378_21745 e977c84810d55374f633abdec49b6a43 529 Gene3D G3DSA:3.40.50.150 150 472 3.9E-97 T 15-10-2018 AM378_21745 e977c84810d55374f633abdec49b6a43 529 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 260 272 3.8E-20 T 15-10-2018 AM378_21745 e977c84810d55374f633abdec49b6a43 529 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 147 163 3.8E-20 T 15-10-2018 AM378_21745 e977c84810d55374f633abdec49b6a43 529 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 171 185 3.8E-20 T 15-10-2018 AM378_21745 e977c84810d55374f633abdec49b6a43 529 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 287 311 3.8E-20 T 15-10-2018 AM378_21745 e977c84810d55374f633abdec49b6a43 529 Pfam PF12161 HsdM N-terminal domain 6 108 9.8E-9 T 15-10-2018 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain AM378_21745 e977c84810d55374f633abdec49b6a43 529 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 263 269 - T 15-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 AM378_21745 e977c84810d55374f633abdec49b6a43 529 Gene3D G3DSA:1.20.1260.30 1 149 2.0E-47 T 15-10-2018 IPR038333 N6 adenine-specific DNA methyltransferase, N-terminal domain superfamily AM378_21745 e977c84810d55374f633abdec49b6a43 529 SUPERFAMILY SSF53335 4 522 1.19E-138 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM378_21095 4f072a2a5fb0ad7c6c8707d89f11d476 91 Pfam PF07338 Protein of unknown function (DUF1471) 36 90 5.2E-14 T 15-10-2018 IPR010854 Domain of unknown function DUF1471 AM378_21095 4f072a2a5fb0ad7c6c8707d89f11d476 91 Gene3D G3DSA:3.30.1660.10 21 90 6.4E-13 T 15-10-2018 IPR025543 Dodecin-like AM378_21095 4f072a2a5fb0ad7c6c8707d89f11d476 91 SUPERFAMILY SSF159871 7 90 1.12E-15 T 15-10-2018 IPR036275 YdgH-like superfamily AM378_06305 a1b3371d6be9066ba0d6da202b4be677 733 Gene3D G3DSA:1.10.1370.40 86 724 8.7E-254 T 15-10-2018 AM378_06305 a1b3371d6be9066ba0d6da202b4be677 733 SUPERFAMILY SSF55486 64 725 1.16E-181 T 15-10-2018 AM378_06305 a1b3371d6be9066ba0d6da202b4be677 733 Pfam PF01432 Peptidase family M3 281 727 1.5E-139 T 15-10-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 AM378_06305 a1b3371d6be9066ba0d6da202b4be677 733 Gene3D G3DSA:1.10.1370.10 197 662 8.7E-254 T 15-10-2018 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 AM378_14320 5f52880d2c66e422043eb88db473abb0 241 Gene3D G3DSA:3.40.50.10490 8 219 5.0E-92 T 15-10-2018 AM378_14320 5f52880d2c66e422043eb88db473abb0 241 SUPERFAMILY SSF52313 6 235 2.49E-95 T 15-10-2018 IPR023591 Ribosomal protein S2, flavodoxin-like domain superfamily AM378_14320 5f52880d2c66e422043eb88db473abb0 241 PRINTS PR00395 Ribosomal protein S2 signature 87 104 6.3E-37 T 15-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM378_14320 5f52880d2c66e422043eb88db473abb0 241 PRINTS PR00395 Ribosomal protein S2 signature 158 175 6.3E-37 T 15-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM378_14320 5f52880d2c66e422043eb88db473abb0 241 PRINTS PR00395 Ribosomal protein S2 signature 175 186 6.3E-37 T 15-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM378_14320 5f52880d2c66e422043eb88db473abb0 241 PRINTS PR00395 Ribosomal protein S2 signature 196 210 6.3E-37 T 15-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM378_14320 5f52880d2c66e422043eb88db473abb0 241 PRINTS PR00395 Ribosomal protein S2 signature 6 24 6.3E-37 T 15-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM378_14320 5f52880d2c66e422043eb88db473abb0 241 PRINTS PR00395 Ribosomal protein S2 signature 37 46 6.3E-37 T 15-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM378_14320 5f52880d2c66e422043eb88db473abb0 241 Hamap MF_00291_B 30S ribosomal protein S2 [rpsB]. 2 225 40.838 T 15-10-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM378_14320 5f52880d2c66e422043eb88db473abb0 241 Pfam PF00318 Ribosomal protein S2 9 224 1.2E-92 T 15-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM378_14320 5f52880d2c66e422043eb88db473abb0 241 Gene3D G3DSA:1.10.287.610 103 150 5.0E-92 T 15-10-2018 AM378_14320 5f52880d2c66e422043eb88db473abb0 241 TIGRFAM TIGR01011 rpsB_bact: ribosomal protein uS2 3 226 8.7E-107 T 15-10-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM378_14320 5f52880d2c66e422043eb88db473abb0 241 ProSitePatterns PS00962 Ribosomal protein S2 signature 1. 6 17 - T 15-10-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 AM378_14320 5f52880d2c66e422043eb88db473abb0 241 ProSitePatterns PS00963 Ribosomal protein S2 signature 2. 158 182 - T 15-10-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 AM378_01465 1472221cde0487aa95486fa5ec5026f4 298 SUPERFAMILY SSF53850 98 296 7.24E-32 T 15-10-2018 AM378_01465 1472221cde0487aa95486fa5ec5026f4 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 14 70 3.2E-17 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_01465 1472221cde0487aa95486fa5ec5026f4 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 38 48 2.5E-6 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_01465 1472221cde0487aa95486fa5ec5026f4 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 27 38 2.5E-6 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_01465 1472221cde0487aa95486fa5ec5026f4 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 48 59 2.5E-6 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_01465 1472221cde0487aa95486fa5ec5026f4 298 Gene3D G3DSA:1.10.10.10 9 98 1.3E-20 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_01465 1472221cde0487aa95486fa5ec5026f4 298 Gene3D G3DSA:3.40.190.10 107 290 2.1E-46 T 15-10-2018 AM378_01465 1472221cde0487aa95486fa5ec5026f4 298 Gene3D G3DSA:3.40.190.10 167 263 2.1E-46 T 15-10-2018 AM378_01465 1472221cde0487aa95486fa5ec5026f4 298 Pfam PF03466 LysR substrate binding domain 94 293 1.1E-28 T 15-10-2018 IPR005119 LysR, substrate-binding AM378_01465 1472221cde0487aa95486fa5ec5026f4 298 SUPERFAMILY SSF46785 10 118 1.92E-20 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM378_01505 796b0151301dce9610f6c148f5268280 367 SMART SM00997 166 324 7.9E-61 T 15-10-2018 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 AM378_01505 796b0151301dce9610f6c148f5268280 367 Gene3D G3DSA:3.40.50.720 168 324 1.5E-99 T 15-10-2018 AM378_01505 796b0151301dce9610f6c148f5268280 367 Pfam PF05221 S-adenosyl-L-homocysteine hydrolase 14 123 1.6E-10 T 15-10-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 AM378_01505 796b0151301dce9610f6c148f5268280 367 Gene3D G3DSA:3.40.50.1480 9 361 1.5E-99 T 15-10-2018 AM378_01505 796b0151301dce9610f6c148f5268280 367 Pfam PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain 180 322 1.5E-33 T 15-10-2018 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 AM378_01505 796b0151301dce9610f6c148f5268280 367 SUPERFAMILY SSF52283 8 360 7.99E-23 T 15-10-2018 AM378_01505 796b0151301dce9610f6c148f5268280 367 SMART SM00996 4 364 1.0E-9 T 15-10-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 AM378_01505 796b0151301dce9610f6c148f5268280 367 SUPERFAMILY SSF51735 166 324 4.51E-43 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily AM378_16920 387e789d25e7efbc8dbac90f620a619a 293 Hamap MF_00735 Ribosomal protein L11 methyltransferase [prmA]. 3 292 33.239 T 15-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 AM378_16920 387e789d25e7efbc8dbac90f620a619a 293 Gene3D G3DSA:3.40.50.150 101 293 1.3E-57 T 15-10-2018 AM378_16920 387e789d25e7efbc8dbac90f620a619a 293 SUPERFAMILY SSF53335 43 290 1.79E-44 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM378_16920 387e789d25e7efbc8dbac90f620a619a 293 Pfam PF06325 Ribosomal protein L11 methyltransferase (PrmA) 3 293 1.2E-102 T 15-10-2018 AM378_16920 387e789d25e7efbc8dbac90f620a619a 293 TIGRFAM TIGR00406 prmA: ribosomal protein L11 methyltransferase 3 286 5.3E-119 T 15-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 AM378_16920 387e789d25e7efbc8dbac90f620a619a 293 PIRSF PIRSF000401 1 293 2.0E-93 T 15-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 AM378_15400 b609e2a5bdd4b84db719cfc25a4dde46 515 SUPERFAMILY SSF81301 82 239 6.32E-41 T 15-10-2018 AM378_15400 b609e2a5bdd4b84db719cfc25a4dde46 515 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 270 330 2.2E-18 T 15-10-2018 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 AM378_15400 b609e2a5bdd4b84db719cfc25a4dde46 515 TIGRFAM TIGR01942 pcnB: poly(A) polymerase 80 511 3.2E-162 T 15-10-2018 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 AM378_15400 b609e2a5bdd4b84db719cfc25a4dde46 515 SUPERFAMILY SSF81891 241 479 2.35E-49 T 15-10-2018 AM378_15400 b609e2a5bdd4b84db719cfc25a4dde46 515 Hamap MF_00957 Poly(A) polymerase I [pcnB]. 44 511 38.984 T 15-10-2018 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 AM378_15400 b609e2a5bdd4b84db719cfc25a4dde46 515 Gene3D G3DSA:3.30.460.10 77 240 2.5E-67 T 15-10-2018 AM378_15400 b609e2a5bdd4b84db719cfc25a4dde46 515 Pfam PF12626 Polymerase A arginine-rich C-terminus 388 508 2.5E-43 T 15-10-2018 IPR025866 Polymerase A arginine-rich C-terminal domain AM378_15400 b609e2a5bdd4b84db719cfc25a4dde46 515 Gene3D G3DSA:1.10.3090.10 241 492 1.4E-100 T 15-10-2018 AM378_15400 b609e2a5bdd4b84db719cfc25a4dde46 515 Pfam PF01743 Poly A polymerase head domain 111 243 2.8E-41 T 15-10-2018 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 AM378_15785 83b34bd792b7ae6b321a3c4d8788fb55 707 Pfam PF07715 TonB-dependent Receptor Plug Domain 52 164 1.0E-20 T 15-10-2018 IPR012910 TonB-dependent receptor, plug domain AM378_15785 83b34bd792b7ae6b321a3c4d8788fb55 707 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 52 707 8.0E-92 T 15-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 AM378_15785 83b34bd792b7ae6b321a3c4d8788fb55 707 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 39 - T 15-10-2018 IPR010916 TonB box, conserved site AM378_15785 83b34bd792b7ae6b321a3c4d8788fb55 707 SUPERFAMILY SSF56935 34 707 1.56E-116 T 15-10-2018 AM378_15785 83b34bd792b7ae6b321a3c4d8788fb55 707 Gene3D G3DSA:2.40.170.20 177 707 2.1E-115 T 15-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AM378_15785 83b34bd792b7ae6b321a3c4d8788fb55 707 Pfam PF00593 TonB dependent receptor 243 704 3.3E-49 T 15-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel AM378_15785 83b34bd792b7ae6b321a3c4d8788fb55 707 Gene3D G3DSA:2.170.130.10 50 173 1.7E-29 T 15-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily AM378_15785 83b34bd792b7ae6b321a3c4d8788fb55 707 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 690 707 - T 15-10-2018 IPR010917 TonB-dependent receptor, conserved site AM378_14795 c83c4f55085d6362e9b3fbec79c1952b 250 Pfam PF01551 Peptidase family M23 144 237 1.7E-30 T 15-10-2018 IPR016047 Peptidase M23 AM378_14795 c83c4f55085d6362e9b3fbec79c1952b 250 SUPERFAMILY SSF51261 48 241 5.23E-49 T 15-10-2018 IPR011055 Duplicated hybrid motif AM378_14795 c83c4f55085d6362e9b3fbec79c1952b 250 SMART SM00257 48 92 2.9E-11 T 15-10-2018 IPR018392 LysM domain AM378_14795 c83c4f55085d6362e9b3fbec79c1952b 250 Pfam PF01476 LysM domain 49 91 3.5E-11 T 15-10-2018 IPR018392 LysM domain AM378_14795 c83c4f55085d6362e9b3fbec79c1952b 250 Gene3D G3DSA:3.10.350.10 41 106 2.1E-13 T 15-10-2018 IPR036779 LysM domain superfamily AM378_14795 c83c4f55085d6362e9b3fbec79c1952b 250 Gene3D G3DSA:2.70.70.10 108 241 4.4E-37 T 15-10-2018 IPR011055 Duplicated hybrid motif AM378_11645 43aa60d6b10abc1f8cf0ea6529d1c5cc 50 Pfam PF01848 Hok/gef family 5 46 7.8E-19 T 15-10-2018 IPR000021 Hok/gef cell toxic protein GO:0016020 AM378_11645 43aa60d6b10abc1f8cf0ea6529d1c5cc 50 PRINTS PR00281 Hok/Gef cell toxic protein family signature 5 23 3.4E-7 T 15-10-2018 IPR000021 Hok/gef cell toxic protein GO:0016020 AM378_11645 43aa60d6b10abc1f8cf0ea6529d1c5cc 50 PRINTS PR00281 Hok/Gef cell toxic protein family signature 25 47 3.4E-7 T 15-10-2018 IPR000021 Hok/gef cell toxic protein GO:0016020 AM378_11645 43aa60d6b10abc1f8cf0ea6529d1c5cc 50 ProDom PD005979 PLASMID MEMBRANE TRANSMEMBRANE POST-SEGREGATION KILLING INHERITANCE ALTERING PERMEABILITY STABLE MAINTENANCE 1 46 1.0E-5 T 15-10-2018 IPR000021 Hok/gef cell toxic protein GO:0016020 AM378_08205 02b39f9e2364d8e5cec42ddd1d5e697c 505 TIGRFAM TIGR01312 XylB: xylulokinase 6 494 6.2E-161 T 15-10-2018 IPR006000 Xylulokinase GO:0004856|GO:0005997 KEGG: 00040+2.7.1.17 AM378_08205 02b39f9e2364d8e5cec42ddd1d5e697c 505 SUPERFAMILY SSF53067 254 498 3.18E-49 T 15-10-2018 AM378_08205 02b39f9e2364d8e5cec42ddd1d5e697c 505 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 134 146 - T 15-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 AM378_08205 02b39f9e2364d8e5cec42ddd1d5e697c 505 Gene3D G3DSA:3.30.420.40 1 253 2.2E-72 T 15-10-2018 AM378_08205 02b39f9e2364d8e5cec42ddd1d5e697c 505 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 3 252 2.9E-68 T 15-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 AM378_08205 02b39f9e2364d8e5cec42ddd1d5e697c 505 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 263 444 1.9E-27 T 15-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 AM378_08205 02b39f9e2364d8e5cec42ddd1d5e697c 505 SUPERFAMILY SSF53067 3 254 2.72E-63 T 15-10-2018 AM378_08205 02b39f9e2364d8e5cec42ddd1d5e697c 505 PIRSF PIRSF000538 1 504 4.6E-116 T 15-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 AM378_08205 02b39f9e2364d8e5cec42ddd1d5e697c 505 Gene3D G3DSA:3.30.420.40 255 491 3.1E-60 T 15-10-2018 AM378_18980 73a68f7cab5ba88c613589ddad97928d 404 SUPERFAMILY SSF102645 185 400 2.62E-80 T 15-10-2018 IPR035929 CoaB-like superfamily KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 AM378_18980 73a68f7cab5ba88c613589ddad97928d 404 SUPERFAMILY SSF52507 3 177 5.76E-60 T 15-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 AM378_18980 73a68f7cab5ba88c613589ddad97928d 404 Pfam PF04127 DNA / pantothenate metabolism flavoprotein 188 369 1.3E-75 T 15-10-2018 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 AM378_18980 73a68f7cab5ba88c613589ddad97928d 404 TIGRFAM TIGR00521 coaBC_dfp: phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase 5 395 2.1E-161 T 15-10-2018 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC GO:0004632|GO:0004633|GO:0010181|GO:0015937|GO:0015941 KEGG: 00770+4.1.1.36+6.3.2.5|MetaCyc: PWY-7851 AM378_18980 73a68f7cab5ba88c613589ddad97928d 404 Gene3D G3DSA:3.40.50.1950 1 185 2.5E-55 T 15-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 AM378_18980 73a68f7cab5ba88c613589ddad97928d 404 Pfam PF02441 Flavoprotein 7 176 4.0E-43 T 15-10-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 AM378_18980 73a68f7cab5ba88c613589ddad97928d 404 Gene3D G3DSA:3.40.50.10300 186 404 2.9E-88 T 15-10-2018 IPR035929 CoaB-like superfamily KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 AM378_10365 a695e033e57f12d0074d8e9cb9e3602a 401 Gene3D G3DSA:3.40.47.10 6 282 2.0E-153 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 AM378_10365 a695e033e57f12d0074d8e9cb9e3602a 401 Gene3D G3DSA:3.40.47.10 141 398 2.0E-153 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 AM378_10365 a695e033e57f12d0074d8e9cb9e3602a 401 PIRSF PIRSF000429 1 401 2.9E-126 T 15-10-2018 IPR002155 Thiolase GO:0016747 AM378_10365 a695e033e57f12d0074d8e9cb9e3602a 401 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 86 104 - T 15-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 AM378_10365 a695e033e57f12d0074d8e9cb9e3602a 401 TIGRFAM TIGR02430 pcaF: 3-oxoadipyl-CoA thiolase 3 401 3.9E-213 T 15-10-2018 IPR012793 Beta-ketoadipyl CoA thiolase GO:0016747|GO:0019619 KEGG: 00360+2.3.1.174|KEGG: 00362+2.3.1.174|MetaCyc: PWY-1361|MetaCyc: PWY-2361|MetaCyc: PWY-6185 AM378_10365 a695e033e57f12d0074d8e9cb9e3602a 401 ProSitePatterns PS00099 Thiolases active site. 382 395 - T 15-10-2018 IPR020610 Thiolase, active site GO:0016747 AM378_10365 a695e033e57f12d0074d8e9cb9e3602a 401 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 399 1.1E-133 T 15-10-2018 IPR002155 Thiolase GO:0016747 AM378_10365 a695e033e57f12d0074d8e9cb9e3602a 401 SUPERFAMILY SSF53901 277 400 8.83E-44 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 AM378_10365 a695e033e57f12d0074d8e9cb9e3602a 401 Pfam PF02803 Thiolase, C-terminal domain 277 400 5.6E-44 T 15-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 AM378_10365 a695e033e57f12d0074d8e9cb9e3602a 401 SUPERFAMILY SSF53901 4 276 1.57E-76 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 AM378_10365 a695e033e57f12d0074d8e9cb9e3602a 401 ProSitePatterns PS00737 Thiolases signature 2. 347 363 - T 15-10-2018 IPR020613 Thiolase, conserved site GO:0016747 AM378_10365 a695e033e57f12d0074d8e9cb9e3602a 401 Pfam PF00108 Thiolase, N-terminal domain 5 268 2.7E-74 T 15-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 AM378_14855 569c01a1a8f6bfe1966e65fcd199a135 238 Pfam PF13098 Thioredoxin-like domain 105 227 2.2E-29 T 15-10-2018 IPR012336 Thioredoxin-like fold AM378_14855 569c01a1a8f6bfe1966e65fcd199a135 238 Gene3D G3DSA:3.40.30.10 71 230 5.0E-53 T 15-10-2018 AM378_14855 569c01a1a8f6bfe1966e65fcd199a135 238 ProSitePatterns PS00194 Thioredoxin family active site. 111 129 - T 15-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 AM378_14855 569c01a1a8f6bfe1966e65fcd199a135 238 Gene3D G3DSA:3.10.450.70 22 70 5.1E-23 T 15-10-2018 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily GO:0042597 AM378_14855 569c01a1a8f6bfe1966e65fcd199a135 238 SUPERFAMILY SSF54423 22 81 4.97E-18 T 15-10-2018 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily GO:0042597 AM378_14855 569c01a1a8f6bfe1966e65fcd199a135 238 SUPERFAMILY SSF52833 91 230 1.68E-41 T 15-10-2018 IPR036249 Thioredoxin-like superfamily AM378_14855 569c01a1a8f6bfe1966e65fcd199a135 238 Pfam PF10411 Disulfide bond isomerase protein N-terminus 27 77 4.2E-15 T 15-10-2018 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal AM378_06980 79882631eb4d137c348108ab65bbed98 334 Pfam PF12706 Beta-lactamase superfamily domain 89 283 2.8E-48 T 15-10-2018 IPR001279 Metallo-beta-lactamase AM378_06980 79882631eb4d137c348108ab65bbed98 334 SMART SM00849 77 266 0.006 T 15-10-2018 IPR001279 Metallo-beta-lactamase AM378_06980 79882631eb4d137c348108ab65bbed98 334 PIRSF PIRSF038896 10 325 5.3E-88 T 15-10-2018 IPR024884 N-acyl-phosphatidylethanolamine-hydrolysing phospholipase D GO:0008270|GO:0070290 Reactome: R-HSA-2466712 AM378_06980 79882631eb4d137c348108ab65bbed98 334 Gene3D G3DSA:3.60.15.10 57 327 1.5E-80 T 15-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AM378_06980 79882631eb4d137c348108ab65bbed98 334 SUPERFAMILY SSF56281 65 303 1.83E-35 T 15-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AM378_15275 02d679b41c9d67528f364c7efacafe17 313 Gene3D G3DSA:3.10.180.10 147 293 4.5E-32 T 15-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AM378_15275 02d679b41c9d67528f364c7efacafe17 313 SUPERFAMILY SSF54593 1 281 8.37E-32 T 15-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AM378_15275 02d679b41c9d67528f364c7efacafe17 313 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 154 267 6.3E-13 T 15-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AM378_22710 32f3423edc7611a6db5385b22f5b670d 535 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 74 265 7.0E-14 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AM378_22710 32f3423edc7611a6db5385b22f5b670d 535 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 375 524 5.5E-8 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AM378_22710 32f3423edc7611a6db5385b22f5b670d 535 Gene3D G3DSA:1.10.3720.10 11 268 1.3E-46 T 15-10-2018 IPR035906 MetI-like superfamily AM378_22710 32f3423edc7611a6db5385b22f5b670d 535 Gene3D G3DSA:1.10.3720.10 290 534 1.7E-26 T 15-10-2018 IPR035906 MetI-like superfamily AM378_22710 32f3423edc7611a6db5385b22f5b670d 535 SUPERFAMILY SSF161098 9 264 5.67E-47 T 15-10-2018 IPR035906 MetI-like superfamily AM378_22710 32f3423edc7611a6db5385b22f5b670d 535 SUPERFAMILY SSF161098 285 528 7.98E-32 T 15-10-2018 IPR035906 MetI-like superfamily AM378_22710 32f3423edc7611a6db5385b22f5b670d 535 TIGRFAM TIGR01253 thiP: thiamine/thiamine pyrophosphate ABC transporter, permease protein 8 525 1.4E-247 T 15-10-2018 IPR005947 Thiamine ABC transporter, permease protein GO:0005215|GO:0015888|GO:0016021 AM378_23740 f669cb49588a3fab9717b300475cfacc 249 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 170 231 1.3E-17 T 15-10-2018 IPR016148 Pili assembly chaperone, C-terminal AM378_23740 f669cb49588a3fab9717b300475cfacc 249 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 27 144 1.2E-38 T 15-10-2018 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 AM378_23740 f669cb49588a3fab9717b300475cfacc 249 SUPERFAMILY SSF49354 27 145 1.65E-39 T 15-10-2018 IPR008962 PapD-like superfamily AM378_23740 f669cb49588a3fab9717b300475cfacc 249 PRINTS PR00969 Pili chaperone signature 73 94 1.1E-33 T 15-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM378_23740 f669cb49588a3fab9717b300475cfacc 249 PRINTS PR00969 Pili chaperone signature 27 36 1.1E-33 T 15-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM378_23740 f669cb49588a3fab9717b300475cfacc 249 PRINTS PR00969 Pili chaperone signature 103 120 1.1E-33 T 15-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM378_23740 f669cb49588a3fab9717b300475cfacc 249 PRINTS PR00969 Pili chaperone signature 126 141 1.1E-33 T 15-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM378_23740 f669cb49588a3fab9717b300475cfacc 249 PRINTS PR00969 Pili chaperone signature 165 180 1.1E-33 T 15-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM378_23740 f669cb49588a3fab9717b300475cfacc 249 ProSitePatterns PS00635 Gram-negative pili assembly chaperone signature. 102 119 - T 15-10-2018 IPR018046 Pili assembly chaperone, conserved site AM378_23740 f669cb49588a3fab9717b300475cfacc 249 Gene3D G3DSA:2.60.40.10 150 243 1.5E-24 T 15-10-2018 IPR013783 Immunoglobulin-like fold AM378_23740 f669cb49588a3fab9717b300475cfacc 249 SUPERFAMILY SSF49584 154 243 1.83E-25 T 15-10-2018 IPR036316 Pili assembly chaperone, C-terminal domain superfamily AM378_23740 f669cb49588a3fab9717b300475cfacc 249 Gene3D G3DSA:2.60.40.10 26 145 4.2E-41 T 15-10-2018 IPR013783 Immunoglobulin-like fold AM378_23335 6d70b76eaa23c6fe159d4ee94880181d 171 Pfam PF00959 Phage lysozyme 53 158 5.7E-20 T 15-10-2018 IPR002196 Glycoside hydrolase, family 24 GO:0003796|GO:0009253|GO:0016998 AM378_23335 6d70b76eaa23c6fe159d4ee94880181d 171 Gene3D G3DSA:1.10.530.40 5 168 1.6E-47 T 15-10-2018 AM378_23335 6d70b76eaa23c6fe159d4ee94880181d 171 SUPERFAMILY SSF53955 10 168 9.72E-54 T 15-10-2018 IPR023346 Lysozyme-like domain superfamily AM378_14075 7ea938ff9bd86f7ae78964b220ce4215 362 Gene3D G3DSA:3.30.1330.30 115 195 5.7E-5 T 15-10-2018 IPR029064 50S ribosomal protein L30e-like AM378_14075 7ea938ff9bd86f7ae78964b220ce4215 362 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 127 199 1.4E-12 T 15-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 AM378_14075 7ea938ff9bd86f7ae78964b220ce4215 362 PIRSF PIRSF006280 1 362 7.6E-168 T 15-10-2018 IPR016479 tRNA/rRNA methyltransferase, YfiF, predicted GO:0008168 AM378_14075 7ea938ff9bd86f7ae78964b220ce4215 362 Gene3D G3DSA:3.40.1280.10 196 362 4.5E-40 T 15-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AM378_14075 7ea938ff9bd86f7ae78964b220ce4215 362 SUPERFAMILY SSF75217 208 361 1.24E-39 T 15-10-2018 IPR029028 Alpha/beta knot methyltransferases AM378_14075 7ea938ff9bd86f7ae78964b220ce4215 362 Pfam PF00588 SpoU rRNA Methylase family 216 353 8.0E-32 T 15-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 AM378_14075 7ea938ff9bd86f7ae78964b220ce4215 362 SUPERFAMILY SSF55315 120 196 3.88E-10 T 15-10-2018 IPR029064 50S ribosomal protein L30e-like AM378_14075 7ea938ff9bd86f7ae78964b220ce4215 362 SMART SM00967 126 201 1.1E-9 T 15-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 AM378_15675 c2a19f2ca1cabbb958ab9fd65546256e 163 Pfam PF00419 Fimbrial protein 30 161 9.1E-13 T 15-10-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM378_15675 c2a19f2ca1cabbb958ab9fd65546256e 163 Gene3D G3DSA:2.60.40.1090 40 162 1.7E-31 T 15-10-2018 IPR036937 Fimbrial-type adhesion domain superfamily GO:0007155|GO:0009289 AM378_15675 c2a19f2ca1cabbb958ab9fd65546256e 163 SUPERFAMILY SSF49401 37 161 2.68E-18 T 15-10-2018 IPR008966 Adhesion domain superfamily AM378_04350 7546342fdd6ce8031c9e2a5ef69dd3ee 78 Gene3D G3DSA:1.10.1200.10 1 78 1.3E-28 T 15-10-2018 IPR036736 ACP-like superfamily AM378_04350 7546342fdd6ce8031c9e2a5ef69dd3ee 78 SUPERFAMILY SSF47336 2 76 9.55E-23 T 15-10-2018 IPR036736 ACP-like superfamily AM378_04350 7546342fdd6ce8031c9e2a5ef69dd3ee 78 Hamap MF_01217 Acyl carrier protein [acpP]. 3 77 21.925 T 15-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 AM378_04350 7546342fdd6ce8031c9e2a5ef69dd3ee 78 ProSitePatterns PS00012 Phosphopantetheine attachment site. 32 47 - T 15-10-2018 IPR006162 Phosphopantetheine attachment site AM378_04350 7546342fdd6ce8031c9e2a5ef69dd3ee 78 TIGRFAM TIGR00517 acyl_carrier: acyl carrier protein 1 76 1.1E-36 T 15-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 AM378_04350 7546342fdd6ce8031c9e2a5ef69dd3ee 78 Pfam PF00550 Phosphopantetheine attachment site 6 73 3.1E-15 T 15-10-2018 IPR009081 Phosphopantetheine binding ACP domain AM378_17740 9931e936407efb9dc45ab9d5f822fedc 189 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 30 187 3.3E-48 T 15-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 AM378_17740 9931e936407efb9dc45ab9d5f822fedc 189 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 64 81 - T 15-10-2018 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 AM378_17740 9931e936407efb9dc45ab9d5f822fedc 189 Gene3D G3DSA:2.40.100.10 24 189 2.1E-70 T 15-10-2018 IPR029000 Cyclophilin-like domain superfamily AM378_17740 9931e936407efb9dc45ab9d5f822fedc 189 SUPERFAMILY SSF50891 26 188 2.48E-58 T 15-10-2018 IPR029000 Cyclophilin-like domain superfamily AM378_17740 9931e936407efb9dc45ab9d5f822fedc 189 PIRSF PIRSF001467 9 188 4.5E-28 T 15-10-2018 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755 AM378_17740 9931e936407efb9dc45ab9d5f822fedc 189 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 43 58 6.0E-11 T 15-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 AM378_17740 9931e936407efb9dc45ab9d5f822fedc 189 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 69 81 6.0E-11 T 15-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 AM378_17740 9931e936407efb9dc45ab9d5f822fedc 189 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 143 158 6.0E-11 T 15-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 AM378_20705 7fd934779f8e4fa7ca37443eb997293e 354 TIGRFAM TIGR01464 hemE: uroporphyrinogen decarboxylase 9 346 3.6E-136 T 15-10-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 AM378_20705 7fd934779f8e4fa7ca37443eb997293e 354 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 5 347 8.6E-142 T 15-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 AM378_20705 7fd934779f8e4fa7ca37443eb997293e 354 Gene3D G3DSA:3.20.20.210 1 354 4.5E-164 T 15-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 AM378_20705 7fd934779f8e4fa7ca37443eb997293e 354 SUPERFAMILY SSF51726 1 352 1.13E-122 T 15-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 AM378_20705 7fd934779f8e4fa7ca37443eb997293e 354 Hamap MF_00218 Uroporphyrinogen decarboxylase [hemE]. 6 349 50.565 T 15-10-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 AM378_20705 7fd934779f8e4fa7ca37443eb997293e 354 ProSitePatterns PS00906 Uroporphyrinogen decarboxylase signature 1. 22 31 - T 15-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 AM378_20705 7fd934779f8e4fa7ca37443eb997293e 354 ProSitePatterns PS00907 Uroporphyrinogen decarboxylase signature 2. 142 158 - T 15-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 AM378_16295 51bfca9b690d533ad5e87a0df2c48962 59 Pfam PF10893 Protein of unknown function (DUF2724) 4 34 5.8E-8 T 15-10-2018 IPR021221 Bacteriophage 186, Fil AM378_00610 e75ffcf74314a6e2b1f4ec7d73084ac1 441 SUPERFAMILY SSF51679 8 435 3.01E-131 T 15-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 AM378_00610 e75ffcf74314a6e2b1f4ec7d73084ac1 441 TIGRFAM TIGR03860 FMN_nitrolo: FMN-dependent oxidoreductase, nitrilotriacetate monooxygenase family 13 429 4.8E-164 T 15-10-2018 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A GO:0004497 AM378_00610 e75ffcf74314a6e2b1f4ec7d73084ac1 441 Pfam PF00296 Luciferase-like monooxygenase 24 383 1.1E-63 T 15-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 AM378_00610 e75ffcf74314a6e2b1f4ec7d73084ac1 441 Gene3D G3DSA:3.20.20.30 326 436 6.5E-31 T 15-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 AM378_00610 e75ffcf74314a6e2b1f4ec7d73084ac1 441 Gene3D G3DSA:3.20.20.30 4 323 7.2E-125 T 15-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 AM378_00610 e75ffcf74314a6e2b1f4ec7d73084ac1 441 PIRSF PIRSF000337 6 441 1.4E-145 T 15-10-2018 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A GO:0004497 AM378_03985 a4ed26f1010b0d2a450d9bdfc9a1323d 306 PRINTS PR00146 Dihydrodipicolinate synthase signature 41 62 5.2E-11 T 15-10-2018 IPR002220 DapA-like GO:0016829 AM378_03985 a4ed26f1010b0d2a450d9bdfc9a1323d 306 PRINTS PR00146 Dihydrodipicolinate synthase signature 134 151 5.2E-11 T 15-10-2018 IPR002220 DapA-like GO:0016829 AM378_03985 a4ed26f1010b0d2a450d9bdfc9a1323d 306 PRINTS PR00146 Dihydrodipicolinate synthase signature 77 95 5.2E-11 T 15-10-2018 IPR002220 DapA-like GO:0016829 AM378_03985 a4ed26f1010b0d2a450d9bdfc9a1323d 306 SMART SM01130 7 295 4.9E-89 T 15-10-2018 IPR002220 DapA-like GO:0016829 AM378_03985 a4ed26f1010b0d2a450d9bdfc9a1323d 306 PIRSF PIRSF001365 3 302 3.2E-77 T 15-10-2018 IPR002220 DapA-like GO:0016829 AM378_03985 a4ed26f1010b0d2a450d9bdfc9a1323d 306 Pfam PF00701 Dihydrodipicolinate synthetase family 9 293 5.6E-60 T 15-10-2018 IPR002220 DapA-like GO:0016829 AM378_03985 a4ed26f1010b0d2a450d9bdfc9a1323d 306 Gene3D G3DSA:3.20.20.70 5 298 8.8E-84 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM378_03985 a4ed26f1010b0d2a450d9bdfc9a1323d 306 SUPERFAMILY SSF51569 5 293 3.45E-83 T 15-10-2018 AM378_10695 e9fccc964ceb4cc9e8683aaaf5bc03fe 767 SUPERFAMILY SSF53649 161 460 3.63E-29 T 15-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 AM378_10695 e9fccc964ceb4cc9e8683aaaf5bc03fe 767 Pfam PF00884 Sulfatase 163 447 8.3E-25 T 15-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 AM378_10695 e9fccc964ceb4cc9e8683aaaf5bc03fe 767 Gene3D G3DSA:3.40.720.10 153 451 5.1E-40 T 15-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 AM378_11715 594cf42bec4f344a60cd2674ea1c742d 254 SUPERFAMILY SSF51735 8 252 7.87E-81 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily AM378_11715 594cf42bec4f344a60cd2674ea1c742d 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 138 146 9.4E-13 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_11715 594cf42bec4f344a60cd2674ea1c742d 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 85 96 9.4E-13 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_11715 594cf42bec4f344a60cd2674ea1c742d 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 158 177 9.4E-13 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_11715 594cf42bec4f344a60cd2674ea1c742d 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 11 28 1.6E-41 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_11715 594cf42bec4f344a60cd2674ea1c742d 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 179 196 1.6E-41 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_11715 594cf42bec4f344a60cd2674ea1c742d 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 85 96 1.6E-41 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_11715 594cf42bec4f344a60cd2674ea1c742d 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 158 177 1.6E-41 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_11715 594cf42bec4f344a60cd2674ea1c742d 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 214 234 1.6E-41 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_11715 594cf42bec4f344a60cd2674ea1c742d 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 132 148 1.6E-41 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_11715 594cf42bec4f344a60cd2674ea1c742d 254 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 10 149 0.0028 T 15-10-2018 AM378_11715 594cf42bec4f344a60cd2674ea1c742d 254 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 145 173 - T 15-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AM378_11715 594cf42bec4f344a60cd2674ea1c742d 254 Gene3D G3DSA:3.40.50.720 1 254 2.4E-81 T 15-10-2018 AM378_11715 594cf42bec4f344a60cd2674ea1c742d 254 Pfam PF00106 short chain dehydrogenase 10 202 1.7E-63 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_17075 b11c10c3112723ee56126a208f32d034 72 TIGRFAM TIGR02975 phageshock_pspG: phage shock protein G 2 65 1.7E-25 T 15-10-2018 IPR014318 Phage shock protein, PspG AM378_17075 b11c10c3112723ee56126a208f32d034 72 Pfam PF09583 Phage shock protein G (Phageshock_PspG) 1 64 2.6E-26 T 15-10-2018 IPR014318 Phage shock protein, PspG AM378_05725 a7a4f6845beddeb528ef096b8f2139fc 337 Gene3D G3DSA:2.40.440.10 22 305 1.9E-85 T 15-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like AM378_05725 a7a4f6845beddeb528ef096b8f2139fc 337 SUPERFAMILY SSF141523 93 235 6.28E-29 T 15-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like AM378_05725 a7a4f6845beddeb528ef096b8f2139fc 337 Pfam PF03734 L,D-transpeptidase catalytic domain 99 234 2.4E-18 T 15-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 AM378_18555 ecb86d0d9902cc88fed408ede0966599 112 Pfam PF04219 Protein of unknown function, DUF 10 98 1.3E-39 T 15-10-2018 IPR007335 Protein of unknown function DUF413 AM378_04005 7735684ea544a8afd3bbcad2c55f2c27 86 Gene3D G3DSA:3.10.20.440 1 86 1.6E-9 T 15-10-2018 AM378_04005 7735684ea544a8afd3bbcad2c55f2c27 86 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 6 83 4.2E-19 T 15-10-2018 AM378_04005 7735684ea544a8afd3bbcad2c55f2c27 86 SUPERFAMILY SSF54292 8 84 4.72E-15 T 15-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 AM378_00925 f416b4bf0ff3a8aa2c6f9e93f6483d44 189 PIRSF PIRSF001296 1 189 1.8E-76 T 15-10-2018 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 AM378_00925 f416b4bf0ff3a8aa2c6f9e93f6483d44 189 Pfam PF02669 K+-transporting ATPase, c chain 5 186 3.4E-71 T 15-10-2018 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 AM378_00925 f416b4bf0ff3a8aa2c6f9e93f6483d44 189 TIGRFAM TIGR00681 kdpC: K+-transporting ATPase, C subunit 4 187 1.3E-75 T 15-10-2018 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 AM378_00925 f416b4bf0ff3a8aa2c6f9e93f6483d44 189 Hamap MF_00276 Potassium-transporting ATPase KdpC subunit [kdpC]. 1 188 34.712 T 15-10-2018 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 AM378_23330 5f783c26cdde3b6e1d4e449578360b46 75 Pfam PF04606 Ogr/Delta-like zinc finger 3 49 6.6E-20 T 15-10-2018 IPR007684 Zinc finger, Ogr/Delta-type AM378_12705 3ebadc3480ac39d1cecd836e270d9c59 312 SUPERFAMILY SSF82282 13 311 2.09E-84 T 15-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 AM378_12705 3ebadc3480ac39d1cecd836e270d9c59 312 PIRSF PIRSF037505 7 169 9.8E-4 T 15-10-2018 IPR017226 Betaine-homocysteine S-methyltransferase, BHMT GO:0005737|GO:0008270|GO:0009086|GO:0047150 Reactome: R-HSA-1614635 AM378_12705 3ebadc3480ac39d1cecd836e270d9c59 312 PIRSF PIRSF037505 271 312 0.041 T 15-10-2018 IPR017226 Betaine-homocysteine S-methyltransferase, BHMT GO:0005737|GO:0008270|GO:0009086|GO:0047150 Reactome: R-HSA-1614635 AM378_12705 3ebadc3480ac39d1cecd836e270d9c59 312 Pfam PF02574 Homocysteine S-methyltransferase 17 309 1.0E-80 T 15-10-2018 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 AM378_12705 3ebadc3480ac39d1cecd836e270d9c59 312 Gene3D G3DSA:3.20.20.330 1 310 3.5E-120 T 15-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 AM378_14250 5c26a8580b012083af999303970f9043 197 SUPERFAMILY SSF53098 5 195 9.86E-68 T 15-10-2018 IPR012337 Ribonuclease H-like superfamily AM378_14250 5c26a8580b012083af999303970f9043 197 Gene3D G3DSA:3.30.420.10 2 197 5.7E-74 T 15-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AM378_14250 5c26a8580b012083af999303970f9043 197 Hamap MF_00052_B Ribonuclease HII [rnhB]. 12 191 39.196 T 15-10-2018 IPR022898 Ribonuclease HII GO:0004523 AM378_14250 5c26a8580b012083af999303970f9043 197 Pfam PF01351 Ribonuclease HII 14 190 3.0E-39 T 15-10-2018 IPR024567 Ribonuclease HII/HIII domain AM378_01105 1fd8cf1fa72d05c349fc46008a4e7d36 264 TIGRFAM TIGR02795 tol_pal_ybgF: tol-pal system protein YbgF 145 261 1.2E-43 T 15-10-2018 IPR014162 Cell division coordinator CpoB, C-terminal AM378_01105 1fd8cf1fa72d05c349fc46008a4e7d36 264 SUPERFAMILY SSF48452 154 259 2.44E-15 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AM378_01105 1fd8cf1fa72d05c349fc46008a4e7d36 264 Gene3D G3DSA:1.20.5.110 35 113 1.6E-32 T 15-10-2018 AM378_01105 1fd8cf1fa72d05c349fc46008a4e7d36 264 Pfam PF13432 Tetratricopeptide repeat 152 216 7.1E-9 T 15-10-2018 AM378_01105 1fd8cf1fa72d05c349fc46008a4e7d36 264 Pfam PF13174 Tetratricopeptide repeat 220 252 3.7E-8 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AM378_01105 1fd8cf1fa72d05c349fc46008a4e7d36 264 Gene3D G3DSA:1.25.40.10 145 263 9.0E-30 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AM378_01105 1fd8cf1fa72d05c349fc46008a4e7d36 264 Hamap MF_02066 Cell division coordinator CpoB [cpoB]. 6 264 19.155 T 15-10-2018 IPR034706 Cell division coordinator CpoB GO:0051301 AM378_01105 1fd8cf1fa72d05c349fc46008a4e7d36 264 Pfam PF16331 TolA binding protein trimerisation 37 111 1.7E-23 T 15-10-2018 IPR032519 YbgF, trimerisation domain GO:0070206 AM378_11955 af1d33b1316a5e36f82a8367574c8254 421 PIRSF PIRSF001563 6 420 1.7E-111 T 15-10-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 AM378_11955 af1d33b1316a5e36f82a8367574c8254 421 SUPERFAMILY SSF53244 286 415 9.81E-34 T 15-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AM378_11955 af1d33b1316a5e36f82a8367574c8254 421 Gene3D G3DSA:3.90.190.20 288 416 2.9E-37 T 15-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AM378_11955 af1d33b1316a5e36f82a8367574c8254 421 Pfam PF08245 Mur ligase middle domain 54 197 1.4E-11 T 15-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 AM378_11955 af1d33b1316a5e36f82a8367574c8254 421 SUPERFAMILY SSF53623 13 284 2.75E-88 T 15-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 AM378_11955 af1d33b1316a5e36f82a8367574c8254 421 TIGRFAM TIGR01499 folC: bifunctional protein FolC 32 413 3.8E-108 T 15-10-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 AM378_11955 af1d33b1316a5e36f82a8367574c8254 421 Gene3D G3DSA:3.40.1190.10 1 287 1.3E-97 T 15-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 AM378_11955 af1d33b1316a5e36f82a8367574c8254 421 ProSitePatterns PS01012 Folylpolyglutamate synthase signature 2. 144 159 - T 15-10-2018 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 Reactome: R-HSA-196757 AM378_08005 cd0f54bc653b8c60400728382832dbfd 301 Pfam PF02780 Transketolase, C-terminal domain 178 293 7.6E-15 T 15-10-2018 IPR033248 Transketolase, C-terminal domain AM378_08005 cd0f54bc653b8c60400728382832dbfd 301 SUPERFAMILY SSF52518 2 166 2.01E-38 T 15-10-2018 IPR029061 Thiamin diphosphate-binding fold AM378_08005 cd0f54bc653b8c60400728382832dbfd 301 SMART SM00861 2 167 7.2E-33 T 15-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain AM378_08005 cd0f54bc653b8c60400728382832dbfd 301 Gene3D G3DSA:3.40.50.970 1 173 7.1E-47 T 15-10-2018 AM378_08005 cd0f54bc653b8c60400728382832dbfd 301 Pfam PF02779 Transketolase, pyrimidine binding domain 3 164 5.6E-25 T 15-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain AM378_08005 cd0f54bc653b8c60400728382832dbfd 301 Gene3D G3DSA:3.40.50.920 177 300 1.3E-24 T 15-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 AM378_08005 cd0f54bc653b8c60400728382832dbfd 301 SUPERFAMILY SSF52922 172 297 2.22E-19 T 15-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 AM378_06325 5d3ca2966dadb7eabb8ce84da9d7358d 264 Pfam PF12697 Alpha/beta hydrolase family 29 256 1.5E-20 T 15-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AM378_06325 5d3ca2966dadb7eabb8ce84da9d7358d 264 SUPERFAMILY SSF53474 9 264 9.78E-51 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold AM378_06325 5d3ca2966dadb7eabb8ce84da9d7358d 264 Gene3D G3DSA:3.40.50.1820 6 259 2.3E-68 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold AM378_10755 358846f737d02461feda353f0b8aca01 405 Pfam PF04932 O-Antigen ligase 194 322 1.5E-15 T 15-10-2018 IPR007016 O-antigen ligase-related AM378_04515 65054492ba032d85c2d122e5775d4635 245 Pfam PF02811 PHP domain 5 110 1.2E-7 T 15-10-2018 IPR004013 PHP domain GO:0003824 AM378_04515 65054492ba032d85c2d122e5775d4635 245 SMART SM00481 4 78 1.1E-16 T 15-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal AM378_04515 65054492ba032d85c2d122e5775d4635 245 Gene3D G3DSA:3.20.20.140 1 245 5.4E-66 T 15-10-2018 AM378_04515 65054492ba032d85c2d122e5775d4635 245 SUPERFAMILY SSF89550 3 241 1.83E-63 T 15-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 AM378_04515 65054492ba032d85c2d122e5775d4635 245 Hamap MF_01561 Probable phosphatase YcdX [ycdX]. 1 243 49.776 T 15-10-2018 IPR023710 Probable phosphatase YcdX GO:0008270 AM378_20715 a8f41de5f4a078880576b20d8c190623 196 Pfam PF04222 Protein of unknown function (DUF416) 5 193 2.7E-80 T 15-10-2018 IPR007338 Protein of unknown function DUF416 AM378_20715 a8f41de5f4a078880576b20d8c190623 196 Gene3D G3DSA:1.20.1590.10 3 194 4.3E-68 T 15-10-2018 IPR023381 YP001051499.1-like domain superfamily AM378_00155 e06e89ff4c3fd548beb807f8a35bf529 271 Pfam PF06750 Bacterial Peptidase A24 N-terminal domain 19 113 1.2E-31 T 15-10-2018 IPR010627 Peptidase A24A, N-terminal AM378_00155 e06e89ff4c3fd548beb807f8a35bf529 271 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 190 200 3.2E-19 T 15-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial AM378_00155 e06e89ff4c3fd548beb807f8a35bf529 271 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 201 212 3.2E-19 T 15-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial AM378_00155 e06e89ff4c3fd548beb807f8a35bf529 271 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 133 150 3.2E-19 T 15-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial AM378_00155 e06e89ff4c3fd548beb807f8a35bf529 271 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 213 228 3.2E-19 T 15-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial AM378_00155 e06e89ff4c3fd548beb807f8a35bf529 271 Pfam PF01478 Type IV leader peptidase family 125 228 1.7E-18 T 15-10-2018 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 AM378_18895 e99615311c2b1f63e2213fff7d645407 321 Gene3D G3DSA:3.40.50.2000 1 163 1.7E-64 T 15-10-2018 AM378_18895 e99615311c2b1f63e2213fff7d645407 321 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 77 308 2.1E-71 T 15-10-2018 IPR002201 Glycosyl transferase, family 9 GO:0016757 AM378_18895 e99615311c2b1f63e2213fff7d645407 321 Gene3D G3DSA:3.40.50.2000 164 321 8.8E-55 T 15-10-2018 AM378_18895 e99615311c2b1f63e2213fff7d645407 321 SUPERFAMILY SSF53756 1 320 4.71E-76 T 15-10-2018 AM378_18895 e99615311c2b1f63e2213fff7d645407 321 TIGRFAM TIGR02193 heptsyl_trn_I: lipopolysaccharide heptosyltransferase I 2 319 4.2E-126 T 15-10-2018 IPR011908 Lipopolysaccharide heptosyltransferase I GO:0008920|GO:0009244 AM378_09385 b177a6a339d2fa3f680b977ba846beee 69 Pfam PF16080 Bacteriophage holin family HP1 2 53 1.4E-12 T 15-10-2018 IPR032118 Bacteriophage holin HP1 family AM378_07965 ad33adfaa7c7b6bf0c64517403c15798 100 Pfam PF06305 Lipopolysaccharide assembly protein A domain 24 86 1.7E-20 T 15-10-2018 IPR010445 Lipopolysaccharide assembly protein A domain GO:0005887 AM378_07965 ad33adfaa7c7b6bf0c64517403c15798 100 Hamap MF_01948 Lipopolysaccharide assembly protein A [lapA]. 1 94 22.098 T 15-10-2018 IPR032906 Lipopolysaccharide assembly protein A GO:0005886|GO:0008653 AM378_06695 213f7bcbfbc3c7f22ae8386dad233a57 180 Gene3D G3DSA:3.40.430.10 5 175 3.7E-46 T 15-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 AM378_06695 213f7bcbfbc3c7f22ae8386dad233a57 180 Pfam PF01872 RibD C-terminal domain 8 170 2.0E-20 T 15-10-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 AM378_06695 213f7bcbfbc3c7f22ae8386dad233a57 180 SUPERFAMILY SSF53597 4 177 6.41E-36 T 15-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 AM378_01930 d84ef4f3eeebabd6b77a62a390cfda6e 87 Gene3D G3DSA:1.10.8.1250 10 86 1.1E-19 T 15-10-2018 IPR038296 Antitoxin ParD superfamily AM378_01930 d84ef4f3eeebabd6b77a62a390cfda6e 87 TIGRFAM TIGR02606 antidote_CC2985: putative addiction module antidote protein, CC2985 family 5 74 2.4E-21 T 15-10-2018 IPR022789 Antitoxin ParD AM378_01930 d84ef4f3eeebabd6b77a62a390cfda6e 87 Pfam PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH 1 80 1.3E-16 T 15-10-2018 IPR022789 Antitoxin ParD AM378_01930 d84ef4f3eeebabd6b77a62a390cfda6e 87 SUPERFAMILY SSF47598 4 44 3.22E-8 T 15-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 AM378_02715 c114a4a251f2d103ae4271d95c7b36c6 297 Pfam PF00483 Nucleotidyl transferase 5 252 1.3E-20 T 15-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 AM378_02715 c114a4a251f2d103ae4271d95c7b36c6 297 Gene3D G3DSA:3.90.550.10 2 296 7.9E-79 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AM378_02715 c114a4a251f2d103ae4271d95c7b36c6 297 SUPERFAMILY SSF53448 1 293 4.06E-57 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AM378_08540 59f7c1a98131ccee69d21bf701581f94 521 Pfam PF06450 Bacterial Na+/H+ antiporter B (NhaB) 1 511 3.2E-276 T 15-10-2018 IPR004671 Na+/H+ antiporter NhaB GO:0006814|GO:0015385|GO:0016021 AM378_08540 59f7c1a98131ccee69d21bf701581f94 521 Hamap MF_01599 Na(+)/H(+) antiporter NhaB [nhaB]. 1 521 355.51 T 15-10-2018 IPR004671 Na+/H+ antiporter NhaB GO:0006814|GO:0015385|GO:0016021 AM378_08540 59f7c1a98131ccee69d21bf701581f94 521 TIGRFAM TIGR00774 NhaB: Na+/H+ antiporter NhaB 1 511 3.6E-275 T 15-10-2018 IPR004671 Na+/H+ antiporter NhaB GO:0006814|GO:0015385|GO:0016021 AM378_22115 78e2bb993ce62517ec30fb9844baddf0 210 TIGRFAM TIGR02305 HpaG-N-term: 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, N-terminal subunit 3 203 1.6E-78 T 15-10-2018 IPR012686 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, N-terminal subunit GO:0008704|GO:0018800 KEGG: 00350+5.3.3.10+4.1.1.68 AM378_22115 78e2bb993ce62517ec30fb9844baddf0 210 Gene3D G3DSA:3.90.850.10 1 208 2.1E-53 T 15-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 AM378_22115 78e2bb993ce62517ec30fb9844baddf0 210 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 5 203 2.1E-39 T 15-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 AM378_22115 78e2bb993ce62517ec30fb9844baddf0 210 SUPERFAMILY SSF56529 2 204 9.68E-53 T 15-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 AM378_20020 edbe6538765d4f05512d3203f955c87b 293 Gene3D G3DSA:3.90.550.10 1 293 2.7E-85 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AM378_20020 edbe6538765d4f05512d3203f955c87b 293 TIGRFAM TIGR01207 rmlA: glucose-1-phosphate thymidylyltransferase 2 286 3.8E-157 T 15-10-2018 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form GO:0008879|GO:0045226 KEGG: 00521+2.7.7.24|KEGG: 00523+2.7.7.24|KEGG: 00525+2.7.7.24|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688|MetaCyc: PWY-7814 AM378_20020 edbe6538765d4f05512d3203f955c87b 293 Pfam PF00483 Nucleotidyl transferase 2 238 1.1E-69 T 15-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 AM378_20020 edbe6538765d4f05512d3203f955c87b 293 SUPERFAMILY SSF53448 1 286 1.33E-89 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AM378_13750 49d37c23648c19e2e4092f222b7f3f5d 111 Pfam PF17345 Family of unknown function (DUF5375) 6 102 3.0E-23 T 15-10-2018 IPR035317 Protein of unknown function DUF5375 AM378_13750 49d37c23648c19e2e4092f222b7f3f5d 111 ProDom PD070475 P4 PHAGE PROPHAGE-DERIVED CNR-LIKE ORF106 T2655 7 104 3.0E-16 T 15-10-2018 IPR035317 Protein of unknown function DUF5375 AM378_14215 bac35a0472e0728d1188650115f155ba 447 TIGRFAM TIGR00905 2A0302: transporter, basic amino acid/polyamine antiporter (APA) family 3 432 5.1E-136 T 15-10-2018 IPR004754 Amino acid antiporter GO:0006865|GO:0016021 AM378_14215 bac35a0472e0728d1188650115f155ba 447 PIRSF PIRSF006060 1 435 6.3E-48 T 15-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 AM378_14215 bac35a0472e0728d1188650115f155ba 447 Pfam PF13520 Amino acid permease 7 420 2.1E-38 T 15-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 AM378_14215 bac35a0472e0728d1188650115f155ba 447 Gene3D G3DSA:1.20.1740.10 2 445 6.3E-59 T 15-10-2018 AM378_01925 8304bf1f97b93afbab90425675482581 85 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 2 77 5.9E-11 T 15-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family AM378_01925 8304bf1f97b93afbab90425675482581 85 Gene3D G3DSA:3.30.2310.20 1 81 1.1E-17 T 15-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily AM378_00885 8781fb6676916849d23b551c16afc992 95 Pfam PF01402 Ribbon-helix-helix protein, copG family 52 89 1.0E-8 T 15-10-2018 IPR002145 Ribbon-helix-helix protein, CopG GO:0006355 AM378_00885 8781fb6676916849d23b551c16afc992 95 SUPERFAMILY SSF47598 51 85 7.12E-5 T 15-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 AM378_14735 92923f41e6327ef422a4a7f76139d396 221 Gene3D G3DSA:3.40.30.10 41 215 6.8E-27 T 15-10-2018 AM378_14735 92923f41e6327ef422a4a7f76139d396 221 SUPERFAMILY SSF52833 51 199 1.87E-23 T 15-10-2018 IPR036249 Thioredoxin-like superfamily AM378_14735 92923f41e6327ef422a4a7f76139d396 221 Pfam PF01323 DSBA-like thioredoxin domain 91 193 2.5E-8 T 15-10-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590|Reactome: R-HSA-9033241 AM378_03315 a81b9b08b91a91a090f8a48cdb3c2e76 518 Pfam PF00367 phosphotransferase system, EIIB 445 474 8.0E-13 T 15-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 AM378_03315 a81b9b08b91a91a090f8a48cdb3c2e76 518 SUPERFAMILY SSF55604 444 517 4.18E-20 T 15-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 AM378_03315 a81b9b08b91a91a090f8a48cdb3c2e76 518 Pfam PF02378 Phosphotransferase system, EIIC 20 358 2.3E-91 T 15-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 AM378_03315 a81b9b08b91a91a090f8a48cdb3c2e76 518 Gene3D G3DSA:3.30.1360.60 439 517 5.0E-26 T 15-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 AM378_03315 a81b9b08b91a91a090f8a48cdb3c2e76 518 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 419 502 2.4E-19 T 15-10-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 AM378_03315 a81b9b08b91a91a090f8a48cdb3c2e76 518 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 456 473 - T 15-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 AM378_01225 eebf756963b4ddc9e898437c25969ca5 190 Pfam PF00857 Isochorismatase family 4 182 1.2E-34 T 15-10-2018 IPR000868 Isochorismatase-like GO:0003824 AM378_01225 eebf756963b4ddc9e898437c25969ca5 190 SUPERFAMILY SSF52499 2 184 6.02E-40 T 15-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 AM378_01225 eebf756963b4ddc9e898437c25969ca5 190 Gene3D G3DSA:3.40.50.850 1 190 6.7E-41 T 15-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 AM378_22490 a39f12e88742da8ff07c6925ae9b9d6a 317 Gene3D G3DSA:3.20.20.70 2 317 4.8E-149 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM378_22490 a39f12e88742da8ff07c6925ae9b9d6a 317 ProSitePatterns PS00958 Transaldolase active site. 129 146 - T 15-10-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 AM378_22490 a39f12e88742da8ff07c6925ae9b9d6a 317 ProSitePatterns PS01054 Transaldolase signature 1. 31 39 - T 15-10-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 AM378_22490 a39f12e88742da8ff07c6925ae9b9d6a 317 TIGRFAM TIGR00874 talAB: transaldolase 4 316 3.5E-163 T 15-10-2018 IPR004730 Transaldolase type 1 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 AM378_22490 a39f12e88742da8ff07c6925ae9b9d6a 317 SUPERFAMILY SSF51569 1 316 1.78E-117 T 15-10-2018 AM378_22490 a39f12e88742da8ff07c6925ae9b9d6a 317 Hamap MF_00492 Transaldolase [tal]. 2 317 51.794 T 15-10-2018 IPR004730 Transaldolase type 1 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 AM378_22490 a39f12e88742da8ff07c6925ae9b9d6a 317 Pfam PF00923 Transaldolase/Fructose-6-phosphate aldolase 14 313 1.9E-101 T 15-10-2018 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 AM378_03930 0054fdb6de629e5cb4d85b2af4dc413f 239 Pfam PF00378 Enoyl-CoA hydratase/isomerase 13 229 8.4E-47 T 15-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 AM378_03930 0054fdb6de629e5cb4d85b2af4dc413f 239 SUPERFAMILY SSF52096 7 221 7.26E-59 T 15-10-2018 IPR029045 ClpP/crotonase-like domain superfamily AM378_03930 0054fdb6de629e5cb4d85b2af4dc413f 239 Gene3D G3DSA:3.90.226.10 3 233 5.3E-62 T 15-10-2018 AM378_03930 0054fdb6de629e5cb4d85b2af4dc413f 239 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 98 118 - T 15-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 AM378_09985 d7df39c2f2c223ff000b1d7894e3e4f8 257 SMART SM00331 1 235 3.6E-5 T 15-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AM378_09985 d7df39c2f2c223ff000b1d7894e3e4f8 257 Pfam PF13672 Protein phosphatase 2C 8 198 1.8E-14 T 15-10-2018 AM378_09985 d7df39c2f2c223ff000b1d7894e3e4f8 257 Gene3D G3DSA:3.60.40.10 1 235 7.6E-47 T 15-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AM378_09985 d7df39c2f2c223ff000b1d7894e3e4f8 257 SUPERFAMILY SSF81606 1 235 3.4E-46 T 15-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AM378_09985 d7df39c2f2c223ff000b1d7894e3e4f8 257 SMART SM00332 1 233 1.7E-8 T 15-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AM378_16625 b145a14401125a8fe07f0185c61f31f9 325 Pfam PF01699 Sodium/calcium exchanger protein 4 144 1.6E-29 T 15-10-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 AM378_16625 b145a14401125a8fe07f0185c61f31f9 325 Pfam PF01699 Sodium/calcium exchanger protein 175 317 1.0E-28 T 15-10-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 AM378_16625 b145a14401125a8fe07f0185c61f31f9 325 Gene3D G3DSA:1.20.58.1130 8 207 2.5E-86 T 15-10-2018 AM378_16625 b145a14401125a8fe07f0185c61f31f9 325 TIGRFAM TIGR00367 TIGR00367: K+-dependent Na+/Ca+ exchanger homolog 2 312 4.1E-89 T 15-10-2018 IPR004481 Sodium/potassium/calcium exchanger Reactome: R-HSA-425561 AM378_16625 b145a14401125a8fe07f0185c61f31f9 325 Gene3D G3DSA:1.20.1420.30 35 309 2.5E-86 T 15-10-2018 AM378_23180 838162cacef97ada47ec3d8658f5fdf0 294 SUPERFAMILY SSF63829 2 264 7.19E-24 T 15-10-2018 AM378_23180 838162cacef97ada47ec3d8658f5fdf0 294 Gene3D G3DSA:2.120.10.30 1 270 4.5E-14 T 15-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like AM378_16755 dc958626d75450f4e97eaa7bfccfb7e1 128 PIRSF PIRSF000029 1 128 5.2E-49 T 15-10-2018 IPR009155 Cytochrome b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900|GO:0042597 AM378_16755 dc958626d75450f4e97eaa7bfccfb7e1 128 SUPERFAMILY SSF47175 23 128 1.44E-30 T 15-10-2018 IPR010980 Cytochrome c/b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900 AM378_16755 dc958626d75450f4e97eaa7bfccfb7e1 128 Gene3D G3DSA:1.20.120.10 18 128 6.9E-46 T 15-10-2018 AM378_16755 dc958626d75450f4e97eaa7bfccfb7e1 128 Pfam PF07361 Cytochrome b562 24 128 3.8E-33 T 15-10-2018 IPR009155 Cytochrome b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900|GO:0042597 AM378_13065 c86350fba9e1a2655e0253ac3421ebb5 205 TIGRFAM TIGR04025 PPOX_FMN_DR2398: pyridoxamine 5'-phosphate oxidase, FMN-binding family 11 205 2.5E-77 T 15-10-2018 IPR024029 Pyridoxamine 5-phosphate oxidase, FMN-dependent AM378_13065 c86350fba9e1a2655e0253ac3421ebb5 205 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 31 122 7.9E-16 T 15-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 AM378_13065 c86350fba9e1a2655e0253ac3421ebb5 205 SUPERFAMILY SSF50475 30 177 6.29E-22 T 15-10-2018 AM378_13065 c86350fba9e1a2655e0253ac3421ebb5 205 Gene3D G3DSA:2.30.110.10 31 155 1.0E-21 T 15-10-2018 IPR012349 FMN-binding split barrel GO:0048037 AM378_16140 23f3dc21691317fa25c3f92be3e1b3ea 886 Gene3D G3DSA:2.20.70.120 745 770 2.2E-5 T 15-10-2018 AM378_16140 23f3dc21691317fa25c3f92be3e1b3ea 886 Pfam PF03406 Phage tail fibre repeat 169 208 3.0E-11 T 15-10-2018 IPR005068 Bacteriophage lambda, Stf, side tail fibre-repeat-2 AM378_16140 23f3dc21691317fa25c3f92be3e1b3ea 886 Pfam PF12571 Phage tail-collar fibre protein 2 149 3.8E-51 T 15-10-2018 IPR022225 Phage tail fibre protein AM378_10090 89c1bcc7eb26d2e5e095ad7812ced8b8 327 SUPERFAMILY SSF46689 263 313 6.57E-11 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AM378_10090 89c1bcc7eb26d2e5e095ad7812ced8b8 327 SMART SM00342 226 309 5.2E-26 T 15-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM378_10090 89c1bcc7eb26d2e5e095ad7812ced8b8 327 SUPERFAMILY SSF52317 1 191 2.62E-47 T 15-10-2018 IPR029062 Class I glutamine amidotransferase-like AM378_10090 89c1bcc7eb26d2e5e095ad7812ced8b8 327 Gene3D G3DSA:3.40.50.880 1 199 5.8E-54 T 15-10-2018 IPR029062 Class I glutamine amidotransferase-like AM378_10090 89c1bcc7eb26d2e5e095ad7812ced8b8 327 Pfam PF01965 DJ-1/PfpI family 1 170 6.7E-16 T 15-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 AM378_10090 89c1bcc7eb26d2e5e095ad7812ced8b8 327 Pfam PF12833 Helix-turn-helix domain 232 310 4.0E-20 T 15-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM378_10090 89c1bcc7eb26d2e5e095ad7812ced8b8 327 Gene3D G3DSA:1.10.10.60 210 316 1.1E-26 T 15-10-2018 AM378_10090 89c1bcc7eb26d2e5e095ad7812ced8b8 327 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 263 305 - T 15-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AM378_10090 89c1bcc7eb26d2e5e095ad7812ced8b8 327 SUPERFAMILY SSF46689 213 259 6.45E-7 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AM378_17195 021489894b8376c256dae89a8314b4c5 602 Pfam PF02254 TrkA-N domain 402 494 5.8E-8 T 15-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 AM378_17195 021489894b8376c256dae89a8314b4c5 602 Pfam PF00999 Sodium/hydrogen exchanger family 10 390 5.8E-38 T 15-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 AM378_17195 021489894b8376c256dae89a8314b4c5 602 Gene3D G3DSA:1.20.1530.20 4 398 5.2E-18 T 15-10-2018 IPR038770 Sodium/solute symporter superfamily AM378_17195 021489894b8376c256dae89a8314b4c5 602 SUPERFAMILY SSF51735 402 495 6.43E-11 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily AM378_17195 021489894b8376c256dae89a8314b4c5 602 Gene3D G3DSA:3.40.50.720 399 503 2.7E-11 T 15-10-2018 AM378_11695 c3e4ec5b11ae1779b812db88958522b4 256 Pfam PF12697 Alpha/beta hydrolase family 18 247 3.7E-19 T 15-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AM378_11695 c3e4ec5b11ae1779b812db88958522b4 256 Gene3D G3DSA:3.40.50.1820 7 253 2.1E-64 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold AM378_11695 c3e4ec5b11ae1779b812db88958522b4 256 TIGRFAM TIGR03695 menH_SHCHC: 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase 15 252 1.2E-80 T 15-10-2018 IPR022485 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase GO:0009234|GO:0070205 KEGG: 00130+4.2.99.20|MetaCyc: PWY-5837 AM378_11695 c3e4ec5b11ae1779b812db88958522b4 256 SUPERFAMILY SSF53474 9 252 1.29E-43 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold AM378_11695 c3e4ec5b11ae1779b812db88958522b4 256 Hamap MF_01660 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase [menH]. 9 253 34.544 T 15-10-2018 IPR022485 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase GO:0009234|GO:0070205 KEGG: 00130+4.2.99.20|MetaCyc: PWY-5837 AM378_09455 86fb24abcd4a3eab0648b8a397f47135 99 Pfam PF17399 Domain of unknown function (DUF5405) 9 94 5.0E-19 T 15-10-2018 IPR035404 Domain of unknown function DUF5405 AM378_09455 86fb24abcd4a3eab0648b8a397f47135 99 ProDom PD067735 GP81 ORF2 GPA 5'REGION ORF81 7 94 4.0E-11 T 15-10-2018 AM378_19755 6b6a044fad984894a0b49117f3b5321a 118 Pfam PF03526 Colicin E1 (microcin) immunity protein 43 84 5.1E-7 T 15-10-2018 IPR003061 Colicin E1 (microcin) immunity protein GO:0015643|GO:0030153 AM378_18280 d3a1a4b5f1f1ffa0c1aabeab12bd6276 726 PIRSF PIRSF034586 86 402 8.6E-61 T 15-10-2018 IPR017030 Virulence effector, SrfC AM378_18280 d3a1a4b5f1f1ffa0c1aabeab12bd6276 726 PIRSF PIRSF034586 5 94 8.1E-16 T 15-10-2018 IPR017030 Virulence effector, SrfC AM378_18280 d3a1a4b5f1f1ffa0c1aabeab12bd6276 726 PIRSF PIRSF034586 399 726 5.8E-79 T 15-10-2018 IPR017030 Virulence effector, SrfC AM378_18280 d3a1a4b5f1f1ffa0c1aabeab12bd6276 726 Pfam PF10139 Putative bacterial virulence factor 22 88 1.5E-10 T 15-10-2018 IPR017030 Virulence effector, SrfC AM378_18280 d3a1a4b5f1f1ffa0c1aabeab12bd6276 726 Pfam PF10139 Putative bacterial virulence factor 403 720 1.9E-43 T 15-10-2018 IPR017030 Virulence effector, SrfC AM378_18280 d3a1a4b5f1f1ffa0c1aabeab12bd6276 726 Pfam PF10139 Putative bacterial virulence factor 97 400 8.0E-48 T 15-10-2018 IPR017030 Virulence effector, SrfC AM378_24125 c2d6ae9a7c57224fc597e989d85465d9 128 Pfam PF01850 PIN domain 5 120 8.2E-13 T 15-10-2018 IPR002716 PIN domain AM378_24125 c2d6ae9a7c57224fc597e989d85465d9 128 Gene3D G3DSA:3.40.50.1010 1 125 1.0E-9 T 15-10-2018 AM378_24125 c2d6ae9a7c57224fc597e989d85465d9 128 SUPERFAMILY SSF88723 1 123 5.89E-20 T 15-10-2018 IPR029060 PIN-like domain superfamily AM378_16300 a5eff850bf2e1ab3c13436bc96643357 169 Pfam PF06892 Phage regulatory protein CII (CP76) 4 160 8.4E-63 T 15-10-2018 IPR009679 Bacteriophage 186, CII AM378_10665 0f831213353d2feaba45414c2a72eff4 255 SUPERFAMILY SSF161098 54 245 2.51E-26 T 15-10-2018 IPR035906 MetI-like superfamily AM378_10665 0f831213353d2feaba45414c2a72eff4 255 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 74 247 3.4E-27 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AM378_10665 0f831213353d2feaba45414c2a72eff4 255 Gene3D G3DSA:1.10.3720.10 55 248 4.5E-22 T 15-10-2018 IPR035906 MetI-like superfamily AM378_15930 02087434100bf1814d60a8e2b96f463a 102 SUPERFAMILY SSF54909 1 97 2.68E-30 T 15-10-2018 IPR011008 Dimeric alpha-beta barrel AM378_15930 02087434100bf1814d60a8e2b96f463a 102 Gene3D G3DSA:3.30.70.100 1 102 1.8E-28 T 15-10-2018 AM378_15930 02087434100bf1814d60a8e2b96f463a 102 Pfam PF03992 Antibiotic biosynthesis monooxygenase 1 84 7.0E-19 T 15-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain AM378_03310 e76d07fa31af8eebe7e56bc3d72910e2 275 Gene3D G3DSA:1.10.10.10 2 81 4.0E-24 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_03310 e76d07fa31af8eebe7e56bc3d72910e2 275 Gene3D G3DSA:3.40.50.10490 91 274 6.3E-43 T 15-10-2018 AM378_03310 e76d07fa31af8eebe7e56bc3d72910e2 275 Pfam PF01380 SIS domain 122 229 1.8E-19 T 15-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 AM378_03310 e76d07fa31af8eebe7e56bc3d72910e2 275 SUPERFAMILY SSF46689 5 81 8.42E-19 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AM378_03310 e76d07fa31af8eebe7e56bc3d72910e2 275 SUPERFAMILY SSF53697 94 256 6.26E-32 T 15-10-2018 AM378_03310 e76d07fa31af8eebe7e56bc3d72910e2 275 Pfam PF01418 Helix-turn-helix domain, rpiR family 6 80 8.2E-19 T 15-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 AM378_19655 afffb8687956885db2b6254dd05662e6 309 SUPERFAMILY SSF144020 26 307 2.35E-96 T 15-10-2018 IPR024064 FdhE-like superfamily AM378_19655 afffb8687956885db2b6254dd05662e6 309 Pfam PF04216 Protein involved in formate dehydrogenase formation 23 306 2.9E-115 T 15-10-2018 IPR006452 Formate dehydrogenase accessory protein GO:0005737 AM378_19655 afffb8687956885db2b6254dd05662e6 309 PIRSF PIRSF018296 1 309 8.3E-135 T 15-10-2018 IPR006452 Formate dehydrogenase accessory protein GO:0005737 AM378_19655 afffb8687956885db2b6254dd05662e6 309 TIGRFAM TIGR01562 FdhE: formate dehydrogenase accessory protein FdhE 2 307 3.8E-125 T 15-10-2018 IPR006452 Formate dehydrogenase accessory protein GO:0005737 AM378_19655 afffb8687956885db2b6254dd05662e6 309 Hamap MF_00611 Protein FdhE [fdhE]. 3 308 49.542 T 15-10-2018 IPR006452 Formate dehydrogenase accessory protein GO:0005737 AM378_19655 afffb8687956885db2b6254dd05662e6 309 Gene3D G3DSA:3.90.1670.10 26 309 3.2E-93 T 15-10-2018 IPR024064 FdhE-like superfamily AM378_09080 0dc28e7548b2eb921899ab4253adef9b 360 Pfam PF00487 Fatty acid desaturase 66 340 1.9E-33 T 15-10-2018 IPR005804 Fatty acid desaturase domain GO:0006629 AM378_19885 c8aff20fdfe8456327a4615127dd8f10 339 SUPERFAMILY SSF161098 89 322 1.05E-21 T 15-10-2018 IPR035906 MetI-like superfamily AM378_19885 c8aff20fdfe8456327a4615127dd8f10 339 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 114 336 1.5E-47 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AM378_16175 443ecbd85904344da76bb2a0a48df5f3 149 Pfam PF05069 Phage virion morphogenesis family 4 146 1.6E-33 T 15-10-2018 IPR006522 Phage virion morphogensis protein AM378_16175 443ecbd85904344da76bb2a0a48df5f3 149 TIGRFAM TIGR01635 tail_comp_S: phage virion morphogenesis protein 7 147 7.3E-34 T 15-10-2018 IPR006522 Phage virion morphogensis protein AM378_07430 f60319d0da3af797da0bb2dac4b3bf64 115 SUPERFAMILY SSF46785 3 103 1.42E-27 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM378_07430 f60319d0da3af797da0bb2dac4b3bf64 115 SMART SM00418 11 89 4.3E-19 T 15-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AM378_07430 f60319d0da3af797da0bb2dac4b3bf64 115 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 13 28 8.0E-6 T 15-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AM378_07430 f60319d0da3af797da0bb2dac4b3bf64 115 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 45 60 8.0E-6 T 15-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AM378_07430 f60319d0da3af797da0bb2dac4b3bf64 115 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 60 75 8.0E-6 T 15-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AM378_07430 f60319d0da3af797da0bb2dac4b3bf64 115 Pfam PF12840 Helix-turn-helix domain 10 69 4.0E-15 T 15-10-2018 AM378_07430 f60319d0da3af797da0bb2dac4b3bf64 115 Gene3D G3DSA:1.10.10.10 3 110 2.0E-29 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_16780 f68c48bd34e97e8c492edcf4e7711299 99 Pfam PF01337 Barstar (barnase inhibitor) 6 79 4.8E-11 T 15-10-2018 IPR000468 Barstar (barnase inhibitor) AM378_16780 f68c48bd34e97e8c492edcf4e7711299 99 Gene3D G3DSA:3.30.370.10 1 89 2.3E-36 T 15-10-2018 IPR035905 Barstar-like superfamily AM378_16780 f68c48bd34e97e8c492edcf4e7711299 99 SUPERFAMILY SSF52038 1 88 7.46E-28 T 15-10-2018 IPR035905 Barstar-like superfamily AM378_08170 f1d9d7583aad4e3e36c8b0d0d2309c1e 313 Pfam PF04909 Amidohydrolase 4 313 1.9E-41 T 15-10-2018 IPR006680 Amidohydrolase-related GO:0016787 AM378_08170 f1d9d7583aad4e3e36c8b0d0d2309c1e 313 Gene3D G3DSA:3.20.20.140 1 311 2.5E-79 T 15-10-2018 AM378_08170 f1d9d7583aad4e3e36c8b0d0d2309c1e 313 SUPERFAMILY SSF51556 1 313 1.3E-70 T 15-10-2018 IPR032466 Metal-dependent hydrolase AM378_17395 dd8b935d762afd5f5c0dce45af04a86c 143 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 14 27 5.6E-13 T 15-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM378_17395 dd8b935d762afd5f5c0dce45af04a86c 143 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 3 14 5.6E-13 T 15-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM378_17395 dd8b935d762afd5f5c0dce45af04a86c 143 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 38 58 5.6E-13 T 15-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM378_17395 dd8b935d762afd5f5c0dce45af04a86c 143 Gene3D G3DSA:1.10.1660.10 1 129 1.8E-37 T 15-10-2018 AM378_17395 dd8b935d762afd5f5c0dce45af04a86c 143 ProSitePatterns PS00552 MerR-type HTH domain signature. 5 27 - T 15-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM378_17395 dd8b935d762afd5f5c0dce45af04a86c 143 Pfam PF13411 MerR HTH family regulatory protein 2 69 5.3E-21 T 15-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM378_17395 dd8b935d762afd5f5c0dce45af04a86c 143 TIGRFAM TIGR02043 ZntR: Zn(II)-responsive transcriptional regulator 1 131 4.5E-68 T 15-10-2018 IPR011788 Zn(II)-responsive transcriptional regulator GO:0003677|GO:0006351|GO:0008270 AM378_17395 dd8b935d762afd5f5c0dce45af04a86c 143 SUPERFAMILY SSF46955 2 121 2.6E-34 T 15-10-2018 IPR009061 Putative DNA-binding domain superfamily AM378_17395 dd8b935d762afd5f5c0dce45af04a86c 143 SMART SM00422 2 71 1.1E-32 T 15-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM378_07660 fe9110a7a0108949ae869837579539d7 110 SUPERFAMILY SSF103481 6 105 2.48E-20 T 15-10-2018 AM378_07660 fe9110a7a0108949ae869837579539d7 110 Pfam PF00893 Small Multidrug Resistance protein 4 94 2.3E-27 T 15-10-2018 IPR000390 Small multidrug resistance protein family GO:0016021 AM378_07660 fe9110a7a0108949ae869837579539d7 110 Gene3D G3DSA:1.10.3730.20 1 110 3.5E-37 T 15-10-2018 AM378_22475 44a947d224d38547d6a511d698d8db73 429 Pfam PF14821 Threonine synthase N terminus 8 80 2.1E-11 T 15-10-2018 IPR029144 Threonine synthase, N-terminal AM378_22475 44a947d224d38547d6a511d698d8db73 429 Gene3D G3DSA:3.40.50.1100 85 394 1.7E-141 T 15-10-2018 AM378_22475 44a947d224d38547d6a511d698d8db73 429 TIGRFAM TIGR00260 thrC: threonine synthase 52 397 2.5E-125 T 15-10-2018 IPR004450 Threonine synthase-like AM378_22475 44a947d224d38547d6a511d698d8db73 429 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 93 368 1.5E-25 T 15-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme AM378_22475 44a947d224d38547d6a511d698d8db73 429 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 97 111 - T 15-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 AM378_22475 44a947d224d38547d6a511d698d8db73 429 Gene3D G3DSA:3.90.1380.10 1 81 1.5E-34 T 15-10-2018 IPR037158 Threonine synthase, N-terminal domain superfamily AM378_22475 44a947d224d38547d6a511d698d8db73 429 SUPERFAMILY SSF53686 1 426 5.11E-132 T 15-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme AM378_22475 44a947d224d38547d6a511d698d8db73 429 Gene3D G3DSA:3.40.50.1100 103 401 1.7E-141 T 15-10-2018 AM378_06200 cbc730fb53ce9b1bf813fb9a36bc6d03 302 Gene3D G3DSA:3.40.190.10 30 301 1.1E-89 T 15-10-2018 AM378_06200 cbc730fb53ce9b1bf813fb9a36bc6d03 302 Gene3D G3DSA:3.40.190.120 126 240 1.1E-89 T 15-10-2018 AM378_06200 cbc730fb53ce9b1bf813fb9a36bc6d03 302 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 27 298 1.3E-63 T 15-10-2018 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0022857|GO:0043190|GO:0055085 AM378_06200 cbc730fb53ce9b1bf813fb9a36bc6d03 302 SUPERFAMILY SSF53850 27 301 4.72E-60 T 15-10-2018 AM378_24265 aa495ac84c0019e72b1efc80384e7b3d 621 SUPERFAMILY SSF52922 491 619 9.29E-32 T 15-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 AM378_24265 aa495ac84c0019e72b1efc80384e7b3d 621 TIGRFAM TIGR00204 dxs: 1-deoxy-D-xylulose-5-phosphate synthase 12 620 0.0 T 15-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 AM378_24265 aa495ac84c0019e72b1efc80384e7b3d 621 ProSitePatterns PS00802 Transketolase signature 2. 425 441 - T 15-10-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 AM378_24265 aa495ac84c0019e72b1efc80384e7b3d 621 Pfam PF02780 Transketolase, C-terminal domain 495 611 8.5E-27 T 15-10-2018 IPR033248 Transketolase, C-terminal domain AM378_24265 aa495ac84c0019e72b1efc80384e7b3d 621 Hamap MF_00315 1-deoxy-D-xylulose-5-phosphate synthase [dxs]. 10 620 46.265 T 15-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 AM378_24265 aa495ac84c0019e72b1efc80384e7b3d 621 SUPERFAMILY SSF52518 317 504 5.3E-57 T 15-10-2018 IPR029061 Thiamin diphosphate-binding fold AM378_24265 aa495ac84c0019e72b1efc80384e7b3d 621 Gene3D G3DSA:3.40.50.970 318 487 6.8E-65 T 15-10-2018 AM378_24265 aa495ac84c0019e72b1efc80384e7b3d 621 Pfam PF13292 1-deoxy-D-xylulose-5-phosphate synthase 14 282 7.5E-118 T 15-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 AM378_24265 aa495ac84c0019e72b1efc80384e7b3d 621 SUPERFAMILY SSF52518 9 381 4.29E-76 T 15-10-2018 IPR029061 Thiamin diphosphate-binding fold AM378_24265 aa495ac84c0019e72b1efc80384e7b3d 621 Pfam PF02779 Transketolase, pyrimidine binding domain 320 479 2.3E-38 T 15-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain AM378_24265 aa495ac84c0019e72b1efc80384e7b3d 621 ProSitePatterns PS00801 Transketolase signature 1. 36 55 - T 15-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 AM378_24265 aa495ac84c0019e72b1efc80384e7b3d 621 SMART SM00861 319 484 1.7E-65 T 15-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain AM378_24265 aa495ac84c0019e72b1efc80384e7b3d 621 Gene3D G3DSA:3.40.50.920 495 621 8.7E-46 T 15-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 AM378_16760 a1255558a79adf54a4667d66f3ee3a15 446 Gene3D G3DSA:3.30.2290.10 7 232 4.5E-92 T 15-10-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal AM378_16760 a1255558a79adf54a4667d66f3ee3a15 446 Pfam PF01523 Putative modulator of DNA gyrase 32 323 1.9E-60 T 15-10-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 AM378_16760 a1255558a79adf54a4667d66f3ee3a15 446 SUPERFAMILY SSF111283 14 445 5.36E-128 T 15-10-2018 IPR036059 Metalloprotease TldD/PmbA superfamily GO:0006508|GO:0008237 AM378_17125 6390d0f612f8cd41dcef758b4f8617a9 171 Pfam PF04345 Chorismate lyase 14 168 5.4E-35 T 15-10-2018 IPR007440 Chorismate--pyruvate lyase GO:0005737|GO:0006744|GO:0008813 KEGG: 00130+4.1.3.40|MetaCyc: PWY-5755|MetaCyc: PWY-5870|MetaCyc: PWY-6148|MetaCyc: PWY-7742|MetaCyc: PWY-7745|MetaCyc: PWY-7929|MetaCyc: PWY-7934|MetaCyc: PWY-7935 AM378_17125 6390d0f612f8cd41dcef758b4f8617a9 171 SUPERFAMILY SSF64288 8 166 2.75E-49 T 15-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily AM378_17125 6390d0f612f8cd41dcef758b4f8617a9 171 Gene3D G3DSA:3.40.1410.10 8 166 2.5E-50 T 15-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily AM378_17125 6390d0f612f8cd41dcef758b4f8617a9 171 Hamap MF_01632 Chorismate pyruvate-lyase [ubiC]. 12 166 26.712 T 15-10-2018 IPR007440 Chorismate--pyruvate lyase GO:0005737|GO:0006744|GO:0008813 KEGG: 00130+4.1.3.40|MetaCyc: PWY-5755|MetaCyc: PWY-5870|MetaCyc: PWY-6148|MetaCyc: PWY-7742|MetaCyc: PWY-7745|MetaCyc: PWY-7929|MetaCyc: PWY-7934|MetaCyc: PWY-7935 AM378_01745 04dd0fec76bd325ecea35048660583c4 275 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 224 265 - T 15-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AM378_01745 04dd0fec76bd325ecea35048660583c4 275 SUPERFAMILY SSF46689 223 270 1.88E-8 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AM378_01745 04dd0fec76bd325ecea35048660583c4 275 SUPERFAMILY SSF51215 28 139 7.85E-19 T 15-10-2018 IPR037923 Transcription regulator HTH-like AM378_01745 04dd0fec76bd325ecea35048660583c4 275 Gene3D G3DSA:1.10.10.60 169 230 4.3E-15 T 15-10-2018 AM378_01745 04dd0fec76bd325ecea35048660583c4 275 Pfam PF12833 Helix-turn-helix domain 193 270 1.1E-21 T 15-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM378_01745 04dd0fec76bd325ecea35048660583c4 275 Pfam PF02311 AraC-like ligand binding domain 21 137 1.0E-17 T 15-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 AM378_01745 04dd0fec76bd325ecea35048660583c4 275 SMART SM00342 187 269 1.3E-26 T 15-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM378_01745 04dd0fec76bd325ecea35048660583c4 275 SUPERFAMILY SSF46689 170 221 9.45E-13 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AM378_01745 04dd0fec76bd325ecea35048660583c4 275 Gene3D G3DSA:1.10.10.60 231 274 6.0E-11 T 15-10-2018 AM378_18995 634f189ae5cf6e6dd0f57f78b9f83350 213 SUPERFAMILY SSF53271 2 212 9.37E-50 T 15-10-2018 IPR029057 Phosphoribosyltransferase-like AM378_18995 634f189ae5cf6e6dd0f57f78b9f83350 213 Pfam PF00156 Phosphoribosyl transferase domain 48 162 1.7E-11 T 15-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 AM378_18995 634f189ae5cf6e6dd0f57f78b9f83350 213 TIGRFAM TIGR00336 pyrE: orotate phosphoribosyltransferase 10 187 4.7E-68 T 15-10-2018 IPR004467 Orotate phosphoribosyl transferase domain GO:0004588 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AM378_18995 634f189ae5cf6e6dd0f57f78b9f83350 213 Hamap MF_01208 Orotate phosphoribosyltransferase [pyrE]. 1 213 36.49 T 15-10-2018 IPR023031 Orotate phosphoribosyltransferase GO:0004588|GO:0006221 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AM378_18995 634f189ae5cf6e6dd0f57f78b9f83350 213 Gene3D G3DSA:3.40.50.2020 1 213 2.3E-79 T 15-10-2018 AM378_15850 9dc7473fc1ccde3bbd19d7507fa67be5 220 Pfam PF09335 SNARE associated Golgi protein 48 173 2.4E-19 T 15-10-2018 IPR032816 SNARE associated Golgi protein AM378_16170 d18cd1ddd020939cafa7f37da53d9a11 609 Gene3D G3DSA:3.40.50.300 1 394 1.8E-26 T 15-10-2018 AM378_16170 d18cd1ddd020939cafa7f37da53d9a11 609 SUPERFAMILY SSF52540 1 378 2.13E-23 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_16170 d18cd1ddd020939cafa7f37da53d9a11 609 Pfam PF13175 AAA ATPase domain 1 373 4.4E-68 T 15-10-2018 AM378_02180 69391fadedeafa8040ddbfc34433c164 618 SUPERFAMILY SSF55486 88 552 6.35E-70 T 15-10-2018 AM378_02180 69391fadedeafa8040ddbfc34433c164 618 Gene3D G3DSA:1.10.1370.10 384 548 3.4E-18 T 15-10-2018 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 AM378_02180 69391fadedeafa8040ddbfc34433c164 618 Gene3D G3DSA:1.10.1370.40 253 277 5.9E-9 T 15-10-2018 AM378_02180 69391fadedeafa8040ddbfc34433c164 618 Gene3D G3DSA:3.40.390.10 287 383 3.4E-18 T 15-10-2018 IPR024079 Metallopeptidase, catalytic domain superfamily GO:0008237 AM378_02180 69391fadedeafa8040ddbfc34433c164 618 Pfam PF01432 Peptidase family M3 149 552 1.4E-21 T 15-10-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 AM378_02180 69391fadedeafa8040ddbfc34433c164 618 Gene3D G3DSA:1.10.1370.10 174 252 5.9E-9 T 15-10-2018 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 AM378_13955 05089d4a355cacea7d9af0b56bfd6d32 76 Pfam PF00462 Glutaredoxin 3 61 9.4E-15 T 15-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 AM378_13955 05089d4a355cacea7d9af0b56bfd6d32 76 Gene3D G3DSA:3.40.30.10 1 75 1.3E-27 T 15-10-2018 AM378_13955 05089d4a355cacea7d9af0b56bfd6d32 76 SUPERFAMILY SSF52833 1 70 6.29E-19 T 15-10-2018 IPR036249 Thioredoxin-like superfamily AM378_13955 05089d4a355cacea7d9af0b56bfd6d32 76 TIGRFAM TIGR02194 GlrX_NrdH: glutaredoxin-like protein NrdH 3 73 1.2E-33 T 15-10-2018 IPR011909 Glutaredoxin-like protein NrdH GO:0045454 AM378_02250 f369ca1b81c9ec2b86f057a7a45587f0 155 SUPERFAMILY SSF51197 2 153 8.51E-33 T 15-10-2018 AM378_02250 f369ca1b81c9ec2b86f057a7a45587f0 155 Pfam PF04074 Domain of unknown function (DUF386) 15 150 1.7E-31 T 15-10-2018 IPR004375 YhcH/YjgK/YiaL family AM378_02250 f369ca1b81c9ec2b86f057a7a45587f0 155 Gene3D G3DSA:2.60.120.370 1 154 2.4E-34 T 15-10-2018 IPR037012 YhcH/YjgK/YiaL superfamily AM378_02250 f369ca1b81c9ec2b86f057a7a45587f0 155 TIGRFAM TIGR00022 TIGR00022: YhcH/YjgK/YiaL family protein 2 152 2.0E-35 T 15-10-2018 IPR004375 YhcH/YjgK/YiaL family AM378_09115 7ae4fec98b44fbc502a3f8519dc22cb5 225 Pfam PF02665 Nitrate reductase gamma subunit 5 224 3.5E-83 T 15-10-2018 IPR023234 NarG-like domain AM378_09115 7ae4fec98b44fbc502a3f8519dc22cb5 225 Gene3D G3DSA:1.20.950.20 1 216 9.8E-86 T 15-10-2018 AM378_09115 7ae4fec98b44fbc502a3f8519dc22cb5 225 TIGRFAM TIGR00351 narI: respiratory nitrate reductase, gamma subunit 1 225 8.2E-117 T 15-10-2018 IPR003816 Nitrate reductase, gamma subunit GO:0008940|GO:0009325|GO:0055114 AM378_09115 7ae4fec98b44fbc502a3f8519dc22cb5 225 SUPERFAMILY SSF103501 1 224 2.48E-73 T 15-10-2018 IPR036197 NarG-like superfamily AM378_20485 e1837ddadb77e8921e6ff3c56966bc0f 241 SUPERFAMILY SSF52317 3 214 4.91E-32 T 15-10-2018 IPR029062 Class I glutamine amidotransferase-like AM378_20485 e1837ddadb77e8921e6ff3c56966bc0f 241 Gene3D G3DSA:3.40.50.880 1 231 6.4E-51 T 15-10-2018 IPR029062 Class I glutamine amidotransferase-like AM378_20485 e1837ddadb77e8921e6ff3c56966bc0f 241 Pfam PF03575 Peptidase family S51 3 205 2.7E-45 T 15-10-2018 IPR005320 Peptidase S51 GO:0006508|GO:0008236 AM378_22940 5b8f1942ad8a0937ccb800514444cea9 284 Pfam PF17113 Regulatory signalling modulator protein AmpE 1 283 9.0E-159 T 15-10-2018 IPR031347 Protein AmpE AM378_06925 a4a307fd3891139008be564c19e57545 105 Gene3D G3DSA:2.60.120.10 4 103 9.9E-14 T 15-10-2018 IPR014710 RmlC-like jelly roll fold AM378_06925 a4a307fd3891139008be564c19e57545 105 SUPERFAMILY SSF51182 8 92 2.25E-13 T 15-10-2018 IPR011051 RmlC-like cupin domain superfamily AM378_01165 b4ba3cb55257212f1b8a7c9fb99b9d89 320 SUPERFAMILY SSF161111 13 211 3.01E-62 T 15-10-2018 IPR027469 Cation efflux transmembrane domain superfamily AM378_01165 b4ba3cb55257212f1b8a7c9fb99b9d89 320 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 14 290 2.3E-97 T 15-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 AM378_01165 b4ba3cb55257212f1b8a7c9fb99b9d89 320 SUPERFAMILY SSF160240 224 289 1.06E-9 T 15-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 AM378_01165 b4ba3cb55257212f1b8a7c9fb99b9d89 320 Gene3D G3DSA:1.20.1510.10 14 210 9.5E-51 T 15-10-2018 IPR027469 Cation efflux transmembrane domain superfamily AM378_01165 b4ba3cb55257212f1b8a7c9fb99b9d89 320 Pfam PF01545 Cation efflux family 18 210 9.9E-53 T 15-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 AM378_07775 f7c1b91cebee754694d7e2a04a67a190 308 Hamap MF_01527_B GTP cyclohydrolase FolE2 [folE2]. 12 302 31.506 T 15-10-2018 IPR022838 GTP cyclohydrolase FolE2 GO:0003934|GO:0035998 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852 AM378_07775 f7c1b91cebee754694d7e2a04a67a190 308 Pfam PF02649 Type I GTP cyclohydrolase folE2 12 297 3.3E-66 T 15-10-2018 IPR003801 GTP cyclohydrolase FolE2/MptA GO:0003933 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852 AM378_11500 9ca76d447a764bf151016165509426cb 397 Pfam PF01494 FAD binding domain 7 346 1.3E-29 T 15-10-2018 IPR002938 FAD-binding domain GO:0071949 AM378_11500 9ca76d447a764bf151016165509426cb 397 Gene3D G3DSA:3.30.9.30 39 358 7.8E-113 T 15-10-2018 AM378_11500 9ca76d447a764bf151016165509426cb 397 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 154 169 1.3E-18 T 15-10-2018 AM378_11500 9ca76d447a764bf151016165509426cb 397 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 285 300 1.3E-18 T 15-10-2018 AM378_11500 9ca76d447a764bf151016165509426cb 397 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 6 28 1.3E-18 T 15-10-2018 AM378_11500 9ca76d447a764bf151016165509426cb 397 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 300 316 1.3E-18 T 15-10-2018 AM378_11500 9ca76d447a764bf151016165509426cb 397 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 334 350 1.3E-18 T 15-10-2018 AM378_11500 9ca76d447a764bf151016165509426cb 397 Gene3D G3DSA:3.50.50.60 8 350 7.8E-113 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AM378_11500 9ca76d447a764bf151016165509426cb 397 SUPERFAMILY SSF51905 5 360 1.59E-63 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AM378_11500 9ca76d447a764bf151016165509426cb 397 SUPERFAMILY SSF54373 179 277 1.33E-14 T 15-10-2018 AM378_23880 c7d182a3faf3fcc51cfbef206fc3fd6a 237 Pfam PF09859 Oxygenase, catalysing oxidative methylation of damaged DNA 65 236 1.2E-87 T 15-10-2018 IPR018655 Protein of unknown function DUF2086 AM378_23880 c7d182a3faf3fcc51cfbef206fc3fd6a 237 Gene3D G3DSA:2.60.120.620 23 233 8.3E-10 T 15-10-2018 AM378_12875 b6ca8cfe132af4b44fb76180f1a8f707 360 Gene3D G3DSA:2.130.10.10 40 358 8.7E-85 T 15-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 AM378_12875 b6ca8cfe132af4b44fb76180f1a8f707 360 SUPERFAMILY SSF51004 48 346 1.02E-37 T 15-10-2018 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain superfamily AM378_12875 b6ca8cfe132af4b44fb76180f1a8f707 360 Pfam PF13360 PQQ-like domain 77 336 1.7E-5 T 15-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat AM378_02190 123bd1c31c3331cc1abb64c0ec4236cc 86 SUPERFAMILY SSF159871 3 86 1.07E-22 T 15-10-2018 IPR036275 YdgH-like superfamily AM378_02190 123bd1c31c3331cc1abb64c0ec4236cc 86 Pfam PF07338 Protein of unknown function (DUF1471) 35 86 7.1E-17 T 15-10-2018 IPR010854 Domain of unknown function DUF1471 AM378_02190 123bd1c31c3331cc1abb64c0ec4236cc 86 Gene3D G3DSA:3.30.1660.10 13 86 3.1E-16 T 15-10-2018 IPR025543 Dodecin-like AM378_04385 3b8c18bc8b7ef756dc0737fb1b64c6d4 477 Pfam PF02378 Phosphotransferase system, EIIC 13 320 3.8E-82 T 15-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 AM378_04385 3b8c18bc8b7ef756dc0737fb1b64c6d4 477 TIGRFAM TIGR00852 pts-Glc: PTS system, maltose and glucose-specific subfamily, IIC component 52 331 1.9E-88 T 15-10-2018 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component GO:0008982|GO:0009401|GO:0016021 AM378_04385 3b8c18bc8b7ef756dc0737fb1b64c6d4 477 Gene3D G3DSA:3.30.1360.60 397 477 3.1E-31 T 15-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 AM378_04385 3b8c18bc8b7ef756dc0737fb1b64c6d4 477 SUPERFAMILY SSF55604 401 474 1.57E-20 T 15-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 AM378_04385 3b8c18bc8b7ef756dc0737fb1b64c6d4 477 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 414 431 - T 15-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 AM378_04385 3b8c18bc8b7ef756dc0737fb1b64c6d4 477 TIGRFAM TIGR02002 PTS-II-BC-glcB: PTS system, glucose-specific IIBC component 2 475 2.3E-230 T 15-10-2018 IPR011299 PTS system glucose-specific IIBC component GO:0005355|GO:0016021|GO:1904659 AM378_04385 3b8c18bc8b7ef756dc0737fb1b64c6d4 477 Pfam PF00367 phosphotransferase system, EIIB 405 436 5.0E-14 T 15-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 AM378_04385 3b8c18bc8b7ef756dc0737fb1b64c6d4 477 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 378 460 1.1E-25 T 15-10-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 AM378_16865 baa2ea9b1cae0469968222917a582c38 341 Gene3D G3DSA:2.40.10.350 180 257 6.4E-34 T 15-10-2018 AM378_16865 baa2ea9b1cae0469968222917a582c38 341 Gene3D G3DSA:2.40.10.340 122 266 6.4E-34 T 15-10-2018 AM378_16865 baa2ea9b1cae0469968222917a582c38 341 TIGRFAM TIGR00219 mreC: rod shape-determining protein MreC 1 275 2.0E-116 T 15-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 AM378_16865 baa2ea9b1cae0469968222917a582c38 341 Pfam PF04085 rod shape-determining protein MreC 123 269 6.4E-37 T 15-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 AM378_19905 e5483a257f8204c6c626c9029b2d5226 551 Pfam PF11658 Cellulose biosynthesis protein BcsG 23 546 4.0E-239 T 15-10-2018 IPR017744 Cellulose biosynthesis protein BcsG AM378_19905 e5483a257f8204c6c626c9029b2d5226 551 TIGRFAM TIGR03368 cellulose_yhjU: cellulose synthase operon protein YhjU 21 549 2.8E-235 T 15-10-2018 IPR017744 Cellulose biosynthesis protein BcsG AM378_02570 982d7318d3b890ddb79e09d9f7615846 301 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 117 300 1.1E-30 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AM378_02570 982d7318d3b890ddb79e09d9f7615846 301 Gene3D G3DSA:1.10.3720.10 89 296 1.0E-23 T 15-10-2018 IPR035906 MetI-like superfamily AM378_02570 982d7318d3b890ddb79e09d9f7615846 301 SUPERFAMILY SSF161098 94 282 1.14E-29 T 15-10-2018 IPR035906 MetI-like superfamily AM378_02570 982d7318d3b890ddb79e09d9f7615846 301 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 23 70 3.0E-13 T 15-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain AM378_17170 fb66a31008457046c025114f36396980 525 SUPERFAMILY SSF160964 22 271 1.96E-82 T 15-10-2018 AM378_17170 fb66a31008457046c025114f36396980 525 Gene3D G3DSA:3.10.650.10 105 279 1.8E-52 T 15-10-2018 AM378_17170 fb66a31008457046c025114f36396980 525 Gene3D G3DSA:2.40.430.10 125 215 1.8E-52 T 15-10-2018 AM378_17170 fb66a31008457046c025114f36396980 525 Pfam PF14785 Maltose transport system permease protein MalF P2 domain 107 271 3.6E-63 T 15-10-2018 IPR029345 Maltose transport system permease protein MalF, P2 domain AM378_17170 fb66a31008457046c025114f36396980 525 Gene3D G3DSA:1.10.3720.10 281 525 1.6E-72 T 15-10-2018 IPR035906 MetI-like superfamily AM378_17170 fb66a31008457046c025114f36396980 525 Gene3D G3DSA:1.20.58.370 9 102 7.0E-39 T 15-10-2018 IPR035277 MalF, N-terminal AM378_17170 fb66a31008457046c025114f36396980 525 SUPERFAMILY SSF161098 272 514 1.06E-59 T 15-10-2018 IPR035906 MetI-like superfamily AM378_17170 fb66a31008457046c025114f36396980 525 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 309 512 1.7E-21 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AM378_06155 aa7a4258e967f6ab62720fb777863610 432 Gene3D G3DSA:1.20.1250.20 42 427 3.5E-51 T 15-10-2018 AM378_06155 aa7a4258e967f6ab62720fb777863610 432 SUPERFAMILY SSF103473 41 427 4.05E-66 T 15-10-2018 IPR036259 MFS transporter superfamily AM378_06155 aa7a4258e967f6ab62720fb777863610 432 ProSitePatterns PS00216 Sugar transport proteins signature 1. 103 119 - T 15-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AM378_06155 aa7a4258e967f6ab62720fb777863610 432 Pfam PF07690 Major Facilitator Superfamily 53 271 4.2E-29 T 15-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM378_23725 1fb54540e5e9585899359fbb472096b9 174 SUPERFAMILY SSF49401 30 174 1.44E-36 T 15-10-2018 IPR008966 Adhesion domain superfamily AM378_23725 1fb54540e5e9585899359fbb472096b9 174 Gene3D G3DSA:2.60.40.1090 41 174 3.4E-36 T 15-10-2018 IPR036937 Fimbrial-type adhesion domain superfamily GO:0007155|GO:0009289 AM378_23725 1fb54540e5e9585899359fbb472096b9 174 Pfam PF00419 Fimbrial protein 31 174 2.7E-15 T 15-10-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM378_02400 25ff1e154efb6bafafd643d2854dc53e 156 PIRSF PIRSF028065 9 154 3.5E-24 T 15-10-2018 IPR016865 Inner membrane protein RclC AM378_02400 25ff1e154efb6bafafd643d2854dc53e 156 Pfam PF04224 Protein of unknown function, DUF417 58 150 1.7E-23 T 15-10-2018 IPR007339 Inner membrane protein RclC-like AM378_01070 beb94457f4fb71ec6c33d9b938c3af59 98 Pfam PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) 18 95 5.7E-33 T 15-10-2018 IPR011846 Cyd operon protein YbgE AM378_01070 beb94457f4fb71ec6c33d9b938c3af59 98 TIGRFAM TIGR02112 cyd_oper_ybgE: cyd operon protein YbgE 6 96 1.7E-37 T 15-10-2018 IPR011846 Cyd operon protein YbgE AM378_16425 ed43662e8e56fee0040f688111e36738 124 Gene3D G3DSA:3.30.70.260 28 107 2.1E-33 T 15-10-2018 AM378_16425 ed43662e8e56fee0040f688111e36738 124 Pfam PF13721 SecD export protein N-terminal TM region 4 103 9.8E-23 T 15-10-2018 IPR027398 SecD export protein N-terminal TM domain AM378_16425 ed43662e8e56fee0040f688111e36738 124 Hamap MF_00904 Modulator protein MzrA [mzrA]. 1 114 27.502 T 15-10-2018 IPR026574 Modulator protein MzrA AM378_00655 b30a013867c61e0371380b870bd0ceb4 219 Hamap MF_00013 Octanoyltransferase [lipB]. 5 206 36.987 T 15-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 AM378_00655 b30a013867c61e0371380b870bd0ceb4 219 ProSitePatterns PS01313 Lipoate-protein ligase B signature. 71 86 - T 15-10-2018 IPR020605 Octanoyltransferase, conserved site GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 AM378_00655 b30a013867c61e0371380b870bd0ceb4 219 Gene3D G3DSA:3.30.930.10 2 203 6.6E-61 T 15-10-2018 AM378_00655 b30a013867c61e0371380b870bd0ceb4 219 ProDom PD006086 LIGASE LIPOATE-PROTEIN B TRANSFERASE ACYLTRANSFERASE LIPOYLTRANSFERASE LIPOYL-ACYL-CARRIER 2.3.1.- PROTEIN-PROTEIN- N-LIPOYLTRANSFERASE 75 128 1.0E-20 T 15-10-2018 AM378_00655 b30a013867c61e0371380b870bd0ceb4 219 SUPERFAMILY SSF55681 5 206 5.14E-68 T 15-10-2018 AM378_00655 b30a013867c61e0371380b870bd0ceb4 219 Pfam PF03099 Biotin/lipoate A/B protein ligase family 63 159 6.2E-6 T 15-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 AM378_00655 b30a013867c61e0371380b870bd0ceb4 219 PIRSF PIRSF016262 2 215 1.6E-56 T 15-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 AM378_00655 b30a013867c61e0371380b870bd0ceb4 219 TIGRFAM TIGR00214 lipB: lipoyl(octanoyl) transferase 28 204 5.2E-72 T 15-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 AM378_19220 c1dc505158cb295d1157fda606074ba0 501 ProSitePatterns PS00211 ABC transporters family signature. 396 410 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM378_19220 c1dc505158cb295d1157fda606074ba0 501 Gene3D G3DSA:3.40.50.300 254 498 2.4E-48 T 15-10-2018 AM378_19220 c1dc505158cb295d1157fda606074ba0 501 Gene3D G3DSA:3.40.50.300 1 248 2.2E-55 T 15-10-2018 AM378_19220 c1dc505158cb295d1157fda606074ba0 501 SMART SM00382 29 225 1.3E-8 T 15-10-2018 IPR003593 AAA+ ATPase domain AM378_19220 c1dc505158cb295d1157fda606074ba0 501 SMART SM00382 277 472 7.1E-9 T 15-10-2018 IPR003593 AAA+ ATPase domain AM378_19220 c1dc505158cb295d1157fda606074ba0 501 Pfam PF00005 ABC transporter 269 423 6.8E-24 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM378_19220 c1dc505158cb295d1157fda606074ba0 501 SUPERFAMILY SSF52540 267 483 4.07E-49 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_19220 c1dc505158cb295d1157fda606074ba0 501 Pfam PF00005 ABC transporter 22 169 1.6E-27 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM378_19220 c1dc505158cb295d1157fda606074ba0 501 SUPERFAMILY SSF52540 3 231 1.08E-55 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_09095 314cf398eeb629886d71dbcf10968e46 428 TIGRFAM TIGR02304 aden_form_hyp: putative adenylate-forming enzyme 3 425 5.8E-175 T 15-10-2018 IPR012685 Conserved hypothetical protein CHP02304, F390 synthetase-related AM378_09095 314cf398eeb629886d71dbcf10968e46 428 Gene3D G3DSA:3.40.50.12780 9 325 8.7E-35 T 15-10-2018 AM378_20245 1f25eca32e6caa0a63bf1bb82f5eebf0 219 TIGRFAM TIGR00697 TIGR00697: conserved hypothetical integral membrane protein 12 205 1.6E-61 T 15-10-2018 IPR003744 Queuosine precursor transporter GO:1990397 AM378_20245 1f25eca32e6caa0a63bf1bb82f5eebf0 219 Pfam PF02592 Putative vitamin uptake transporter 43 199 1.8E-34 T 15-10-2018 IPR003744 Queuosine precursor transporter GO:1990397 AM378_20245 1f25eca32e6caa0a63bf1bb82f5eebf0 219 Hamap MF_02088 Probable queuosine precursor transporter. 7 213 15.368 T 15-10-2018 IPR003744 Queuosine precursor transporter GO:1990397 AM378_06765 32e48864739b5cd16793c67faf55e872 305 Gene3D G3DSA:3.40.190.10 55 279 7.2E-40 T 15-10-2018 AM378_06765 32e48864739b5cd16793c67faf55e872 305 Gene3D G3DSA:3.40.190.10 145 249 7.2E-40 T 15-10-2018 AM378_06765 32e48864739b5cd16793c67faf55e872 305 SMART SM00062 56 290 7.4E-24 T 15-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AM378_06765 32e48864739b5cd16793c67faf55e872 305 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 65 287 1.6E-37 T 15-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AM378_06765 32e48864739b5cd16793c67faf55e872 305 SUPERFAMILY SSF53850 53 287 8.01E-42 T 15-10-2018 AM378_11425 a2bb004f2b8a08041bfb490de508b916 191 Gene3D G3DSA:3.90.1720.10 65 190 1.5E-44 T 15-10-2018 AM378_11425 a2bb004f2b8a08041bfb490de508b916 191 SUPERFAMILY SSF54001 70 188 6.54E-39 T 15-10-2018 IPR038765 Papain-like cysteine peptidase superfamily AM378_11425 a2bb004f2b8a08041bfb490de508b916 191 Pfam PF00877 NlpC/P60 family 82 186 1.3E-31 T 15-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain AM378_01235 6ea116f2406e008350ac4ace3a6ed5aa 263 TIGRFAM TIGR00637 ModE_repress: ModE molybdate transport repressor domain 16 107 7.5E-38 T 15-10-2018 IPR003725 Molybdenum-binding protein ModE, N-terminal AM378_01235 6ea116f2406e008350ac4ace3a6ed5aa 263 SUPERFAMILY SSF50331 122 192 1.31E-19 T 15-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal AM378_01235 6ea116f2406e008350ac4ace3a6ed5aa 263 SUPERFAMILY SSF46785 2 103 2.04E-25 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM378_01235 6ea116f2406e008350ac4ace3a6ed5aa 263 TIGRFAM TIGR00638 Mop: molybdenum-pterin binding domain 122 191 3.4E-26 T 15-10-2018 IPR004606 Molybdenum-pterin binding GO:0015689 AM378_01235 6ea116f2406e008350ac4ace3a6ed5aa 263 Pfam PF03459 TOBE domain 198 259 2.1E-13 T 15-10-2018 IPR005116 Transport-associated OB, type 1 AM378_01235 6ea116f2406e008350ac4ace3a6ed5aa 263 Pfam PF03459 TOBE domain 124 188 7.7E-17 T 15-10-2018 IPR005116 Transport-associated OB, type 1 AM378_01235 6ea116f2406e008350ac4ace3a6ed5aa 263 SUPERFAMILY SSF50331 173 259 2.55E-16 T 15-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal AM378_01235 6ea116f2406e008350ac4ace3a6ed5aa 263 Gene3D G3DSA:1.10.10.10 1 107 6.1E-35 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_01235 6ea116f2406e008350ac4ace3a6ed5aa 263 Gene3D G3DSA:2.40.50.100 183 253 6.0E-19 T 15-10-2018 AM378_01235 6ea116f2406e008350ac4ace3a6ed5aa 263 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 20 83 4.4E-13 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_01235 6ea116f2406e008350ac4ace3a6ed5aa 263 Gene3D G3DSA:2.40.50.100 108 182 5.5E-24 T 15-10-2018 AM378_01235 6ea116f2406e008350ac4ace3a6ed5aa 263 PIRSF PIRSF005763 1 263 5.0E-96 T 15-10-2018 IPR016462 Molybdate-dependent transcriptional regulator ModE GO:0006355|GO:0015689|GO:0030151 AM378_18385 c50ab480fbdeebe159695bd27aaf1915 479 Gene3D G3DSA:3.90.1300.10 4 478 1.9E-131 T 15-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 AM378_18385 c50ab480fbdeebe159695bd27aaf1915 479 SUPERFAMILY SSF75304 5 474 6.93E-114 T 15-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 AM378_18385 c50ab480fbdeebe159695bd27aaf1915 479 Pfam PF01425 Amidase 25 454 8.2E-83 T 15-10-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 AM378_18385 c50ab480fbdeebe159695bd27aaf1915 479 ProSitePatterns PS00571 Amidases signature. 143 174 - T 15-10-2018 IPR020556 Amidase, conserved site KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921|Reactome: R-HSA-2142753 AM378_00345 4066a89683b093a36e5fcf26f53cca35 270 Gene3D G3DSA:3.50.30.50 36 262 3.7E-14 T 15-10-2018 IPR037175 Kynurenine formamidase superfamily GO:0004061|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|MetaCyc: PWY-7765 AM378_00345 4066a89683b093a36e5fcf26f53cca35 270 Pfam PF04199 Putative cyclase 52 194 9.6E-11 T 15-10-2018 IPR007325 Kynurenine formamidase/cyclase-like GO:0004061|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|MetaCyc: PWY-7765 AM378_00345 4066a89683b093a36e5fcf26f53cca35 270 SUPERFAMILY SSF102198 53 260 1.31E-11 T 15-10-2018 IPR037175 Kynurenine formamidase superfamily GO:0004061|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|MetaCyc: PWY-7765 AM378_22170 f15973a1c9e361a552d07ee31b1ee23b 171 SMART SM00903 15 162 1.2E-49 T 15-10-2018 IPR002563 Flavin reductase like domain GO:0010181 AM378_22170 f15973a1c9e361a552d07ee31b1ee23b 171 TIGRFAM TIGR02296 HpaC: 4-hydroxyphenylacetate 3-monooxygenase, reductase component 11 163 8.1E-76 T 15-10-2018 IPR011982 4-hydroxyphenylacetate 3-monooxygenase, reductase component GO:0016651|GO:0042537|GO:0051287|GO:0055114 KEGG: 00740+1.5.1.36 AM378_22170 f15973a1c9e361a552d07ee31b1ee23b 171 Gene3D G3DSA:2.30.110.10 1 166 3.8E-42 T 15-10-2018 IPR012349 FMN-binding split barrel GO:0048037 AM378_22170 f15973a1c9e361a552d07ee31b1ee23b 171 Pfam PF01613 Flavin reductase like domain 15 163 1.6E-26 T 15-10-2018 IPR002563 Flavin reductase like domain GO:0010181 AM378_22170 f15973a1c9e361a552d07ee31b1ee23b 171 SUPERFAMILY SSF50475 10 163 8.83E-47 T 15-10-2018 AM378_00335 765a39036a8921360c3210af337d41cc 255 SUPERFAMILY SSF53474 13 245 4.17E-38 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold AM378_00335 765a39036a8921360c3210af337d41cc 255 Pfam PF00975 Thioesterase domain 25 243 6.0E-34 T 15-10-2018 IPR001031 Thioesterase GO:0009058|GO:0016788 Reactome: R-HSA-75105 AM378_00335 765a39036a8921360c3210af337d41cc 255 Gene3D G3DSA:3.40.50.1820 11 247 2.5E-48 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold AM378_06985 76c7107df69c58c8a9741ff73ea2642a 310 Pfam PF12852 Cupin 2 183 1.9E-34 T 15-10-2018 IPR032783 AraC-type transcription regulator, ligand-binding domain AM378_06985 76c7107df69c58c8a9741ff73ea2642a 310 SMART SM00342 216 299 4.0E-27 T 15-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM378_06985 76c7107df69c58c8a9741ff73ea2642a 310 Gene3D G3DSA:1.10.10.60 196 305 2.0E-26 T 15-10-2018 AM378_06985 76c7107df69c58c8a9741ff73ea2642a 310 SUPERFAMILY SSF46689 252 302 1.08E-12 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AM378_06985 76c7107df69c58c8a9741ff73ea2642a 310 SUPERFAMILY SSF46689 199 249 3.58E-7 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AM378_06985 76c7107df69c58c8a9741ff73ea2642a 310 Pfam PF12833 Helix-turn-helix domain 222 301 1.6E-19 T 15-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM378_06985 76c7107df69c58c8a9741ff73ea2642a 310 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 253 295 - T 15-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AM378_06985 76c7107df69c58c8a9741ff73ea2642a 310 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 268 283 5.1E-6 T 15-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM378_06985 76c7107df69c58c8a9741ff73ea2642a 310 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 283 299 5.1E-6 T 15-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM378_20335 c6b88f5481aedcb3dde8afc312d176be 371 Pfam PF13458 Periplasmic binding protein 27 353 4.1E-60 T 15-10-2018 IPR028081 Leucine-binding protein domain AM378_20335 c6b88f5481aedcb3dde8afc312d176be 371 Gene3D G3DSA:3.40.50.2300 28 347 1.8E-115 T 15-10-2018 AM378_20335 c6b88f5481aedcb3dde8afc312d176be 371 SUPERFAMILY SSF53822 25 369 2.29E-87 T 15-10-2018 IPR028082 Periplasmic binding protein-like I AM378_20335 c6b88f5481aedcb3dde8afc312d176be 371 Gene3D G3DSA:3.40.50.2300 145 273 1.8E-115 T 15-10-2018 AM378_20335 c6b88f5481aedcb3dde8afc312d176be 371 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 68 86 7.3E-63 T 15-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 AM378_20335 c6b88f5481aedcb3dde8afc312d176be 371 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 255 273 7.3E-63 T 15-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 AM378_20335 c6b88f5481aedcb3dde8afc312d176be 371 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 331 346 7.3E-63 T 15-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 AM378_20335 c6b88f5481aedcb3dde8afc312d176be 371 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 278 291 7.3E-63 T 15-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 AM378_20335 c6b88f5481aedcb3dde8afc312d176be 371 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 49 65 7.3E-63 T 15-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 AM378_20335 c6b88f5481aedcb3dde8afc312d176be 371 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 27 43 7.3E-63 T 15-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 AM378_20335 c6b88f5481aedcb3dde8afc312d176be 371 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 89 99 7.3E-63 T 15-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 AM378_20710 c39834971bd0ed05ee6df91d30102a34 228 Pfam PF04493 Endonuclease V 22 207 4.0E-70 T 15-10-2018 IPR007581 Endonuclease V GO:0004519|GO:0006281 AM378_20710 c39834971bd0ed05ee6df91d30102a34 228 Gene3D G3DSA:3.30.2170.10 1 215 2.0E-80 T 15-10-2018 AM378_20710 c39834971bd0ed05ee6df91d30102a34 228 Hamap MF_00801 Endonuclease V [nfi]. 3 217 33.814 T 15-10-2018 IPR007581 Endonuclease V GO:0004519|GO:0006281 AM378_05835 c879202cad518484b05940e151b816ac 545 Pfam PF00884 Sulfatase 237 525 1.2E-46 T 15-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 AM378_05835 c879202cad518484b05940e151b816ac 545 Gene3D G3DSA:3.40.720.10 226 545 7.9E-88 T 15-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 AM378_05835 c879202cad518484b05940e151b816ac 545 SUPERFAMILY SSF53649 237 530 4.8E-24 T 15-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 AM378_05835 c879202cad518484b05940e151b816ac 545 Pfam PF08019 Domain of unknown function (DUF1705) 56 208 8.9E-51 T 15-10-2018 IPR012549 Phosphoethanolamine transferase, N-terminal GO:0016021 AM378_24180 c81f1a093ebab3394e9971ae9203d5c6 607 PIRSF PIRSF036918 1 606 2.7E-232 T 15-10-2018 IPR017069 Maltodextrin glucosidase GO:0004558|GO:0005737|GO:0005975 KEGG: 00052+3.2.1.20|KEGG: 00500+3.2.1.20|MetaCyc: PWY-842 AM378_24180 c81f1a093ebab3394e9971ae9203d5c6 607 Pfam PF00128 Alpha amylase, catalytic domain 174 490 5.4E-77 T 15-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AM378_24180 c81f1a093ebab3394e9971ae9203d5c6 607 SMART SM00642 124 518 1.2E-88 T 15-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AM378_24180 c81f1a093ebab3394e9971ae9203d5c6 607 Pfam PF02903 Alpha amylase, N-terminal ig-like domain 1 102 6.5E-13 T 15-10-2018 IPR004185 Glycoside hydrolase, family 13, N-terminal Ig-like domain GO:0004553|GO:0005975 AM378_24180 c81f1a093ebab3394e9971ae9203d5c6 607 SUPERFAMILY SSF51445 113 527 2.2E-93 T 15-10-2018 IPR017853 Glycoside hydrolase superfamily AM378_24180 c81f1a093ebab3394e9971ae9203d5c6 607 SUPERFAMILY SSF81296 6 102 5.13E-5 T 15-10-2018 IPR014756 Immunoglobulin E-set AM378_24180 c81f1a093ebab3394e9971ae9203d5c6 607 Gene3D G3DSA:2.60.40.1180 522 605 5.2E-7 T 15-10-2018 IPR013780 Glycosyl hydrolase, all-beta AM378_24180 c81f1a093ebab3394e9971ae9203d5c6 607 Gene3D G3DSA:3.20.20.80 112 520 1.8E-127 T 15-10-2018 AM378_24180 c81f1a093ebab3394e9971ae9203d5c6 607 SUPERFAMILY SSF51011 527 604 9.81E-7 T 15-10-2018 AM378_04145 29aa4938aae427c8339e198ad779ca51 338 Pfam PF01757 Acyltransferase family 4 311 3.6E-31 T 15-10-2018 IPR002656 Acyltransferase 3 GO:0016747 AM378_12310 4f73d78e61cf6d4b0974b03bddefa958 818 SUPERFAMILY SSF56935 557 714 1.14E-6 T 15-10-2018 AM378_12310 4f73d78e61cf6d4b0974b03bddefa958 818 Gene3D G3DSA:1.25.40.10 56 252 1.4E-5 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AM378_12310 4f73d78e61cf6d4b0974b03bddefa958 818 TIGRFAM TIGR03939 PGA_TPR_OMP: poly-beta-1,6 N-acetyl-D-glucosamine export porin PgaA 22 818 9.9E-270 T 15-10-2018 IPR023870 Poly-beta-1,6 N-acetyl-D-glucosamine export porin PgaA GO:1901515 AM378_12310 4f73d78e61cf6d4b0974b03bddefa958 818 SUPERFAMILY SSF48452 405 513 2.51E-5 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AM378_12310 4f73d78e61cf6d4b0974b03bddefa958 818 Gene3D G3DSA:1.25.40.10 416 500 3.6E-7 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AM378_04635 396e1ba61731e7eac026cbb8495b7127 346 Pfam PF02653 Branched-chain amino acid transport system / permease component 65 335 4.8E-47 T 15-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 AM378_21270 03537876412c778eb15357314e8475bd 323 Pfam PF00892 EamA-like transporter family 161 291 1.3E-14 T 15-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AM378_21270 03537876412c778eb15357314e8475bd 323 Pfam PF00892 EamA-like transporter family 10 144 8.0E-25 T 15-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AM378_21270 03537876412c778eb15357314e8475bd 323 SUPERFAMILY SSF103481 43 145 2.35E-12 T 15-10-2018 AM378_21855 71808e8fc015433d3354c7a5a76c8ab3 360 Pfam PF00267 Gram-negative porin 26 360 5.0E-113 T 15-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 AM378_21855 71808e8fc015433d3354c7a5a76c8ab3 360 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 95 105 3.5E-9 T 15-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 AM378_21855 71808e8fc015433d3354c7a5a76c8ab3 360 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 315 332 3.5E-9 T 15-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 AM378_21855 71808e8fc015433d3354c7a5a76c8ab3 360 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 233 245 3.5E-9 T 15-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 AM378_21855 71808e8fc015433d3354c7a5a76c8ab3 360 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 51 62 3.5E-9 T 15-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 AM378_21855 71808e8fc015433d3354c7a5a76c8ab3 360 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 152 163 3.5E-9 T 15-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 AM378_21855 71808e8fc015433d3354c7a5a76c8ab3 360 PRINTS PR00183 E.coli/Salmonella-type porin signature 50 68 4.2E-49 T 15-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 AM378_21855 71808e8fc015433d3354c7a5a76c8ab3 360 PRINTS PR00183 E.coli/Salmonella-type porin signature 239 256 4.2E-49 T 15-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 AM378_21855 71808e8fc015433d3354c7a5a76c8ab3 360 PRINTS PR00183 E.coli/Salmonella-type porin signature 21 37 4.2E-49 T 15-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 AM378_21855 71808e8fc015433d3354c7a5a76c8ab3 360 PRINTS PR00183 E.coli/Salmonella-type porin signature 271 290 4.2E-49 T 15-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 AM378_21855 71808e8fc015433d3354c7a5a76c8ab3 360 PRINTS PR00183 E.coli/Salmonella-type porin signature 150 172 4.2E-49 T 15-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 AM378_21855 71808e8fc015433d3354c7a5a76c8ab3 360 PRINTS PR00183 E.coli/Salmonella-type porin signature 95 117 4.2E-49 T 15-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 AM378_21855 71808e8fc015433d3354c7a5a76c8ab3 360 Gene3D G3DSA:2.40.160.10 21 360 4.0E-128 T 15-10-2018 IPR023614 Porin domain superfamily AM378_21855 71808e8fc015433d3354c7a5a76c8ab3 360 SUPERFAMILY SSF56935 21 360 2.98E-69 T 15-10-2018 AM378_14200 fd6b1918ca3bda58e9d9017f4c7da8b6 443 SUPERFAMILY SSF82829 232 317 7.85E-25 T 15-10-2018 AM378_14200 fd6b1918ca3bda58e9d9017f4c7da8b6 443 TIGRFAM TIGR02433 lysidine_TilS_C: tRNA(Ile)-lysidine synthetase, C-terminal domain 374 406 1.5E-13 T 15-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 AM378_14200 fd6b1918ca3bda58e9d9017f4c7da8b6 443 Pfam PF09179 TilS substrate binding domain 246 313 4.6E-19 T 15-10-2018 IPR015262 tRNA(Ile)-lysidine synthase , substrate-binding domain GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 AM378_14200 fd6b1918ca3bda58e9d9017f4c7da8b6 443 SUPERFAMILY SSF56037 322 436 2.38E-30 T 15-10-2018 AM378_14200 fd6b1918ca3bda58e9d9017f4c7da8b6 443 TIGRFAM TIGR02432 lysidine_TilS_N: tRNA(Ile)-lysidine synthetase 19 201 3.0E-50 T 15-10-2018 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 AM378_14200 fd6b1918ca3bda58e9d9017f4c7da8b6 443 SUPERFAMILY SSF52402 13 231 6.49E-64 T 15-10-2018 AM378_14200 fd6b1918ca3bda58e9d9017f4c7da8b6 443 Gene3D G3DSA:3.40.50.620 8 231 3.2E-71 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM378_14200 fd6b1918ca3bda58e9d9017f4c7da8b6 443 Hamap MF_01161 tRNA(Ile)-lysidine synthase [tilS]. 7 305 23.431 T 15-10-2018 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 AM378_14200 fd6b1918ca3bda58e9d9017f4c7da8b6 443 Pfam PF01171 PP-loop family 20 196 9.5E-56 T 15-10-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 AM378_14200 fd6b1918ca3bda58e9d9017f4c7da8b6 443 Gene3D G3DSA:1.20.59.20 232 316 1.9E-26 T 15-10-2018 AM378_14200 fd6b1918ca3bda58e9d9017f4c7da8b6 443 SMART SM00977 361 434 2.0E-25 T 15-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 AM378_14200 fd6b1918ca3bda58e9d9017f4c7da8b6 443 Pfam PF11734 TilS substrate C-terminal domain 361 434 2.7E-27 T 15-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 AM378_12065 52c00e1176925cd72cf66e9f903a5d8a 151 SMART SM00450 32 129 6.1E-12 T 15-10-2018 IPR001763 Rhodanese-like domain AM378_12065 52c00e1176925cd72cf66e9f903a5d8a 151 Gene3D G3DSA:3.40.250.10 14 131 1.2E-25 T 15-10-2018 IPR036873 Rhodanese-like domain superfamily AM378_12065 52c00e1176925cd72cf66e9f903a5d8a 151 SUPERFAMILY SSF52821 18 130 1.31E-22 T 15-10-2018 IPR036873 Rhodanese-like domain superfamily AM378_12065 52c00e1176925cd72cf66e9f903a5d8a 151 ProSitePatterns PS00380 Rhodanese signature 1. 57 68 - T 15-10-2018 IPR001307 Thiosulphate sulfurtransferase, conserved site GO:0004792 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350|MetaCyc: PWY-7927|Reactome: R-HSA-1614558 AM378_12065 52c00e1176925cd72cf66e9f903a5d8a 151 Pfam PF00581 Rhodanese-like domain 40 125 1.7E-11 T 15-10-2018 IPR001763 Rhodanese-like domain AM378_07370 0e1076826fb8a248181b85d94df87b1f 197 SUPERFAMILY SSF48498 81 193 2.52E-27 T 15-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AM378_07370 0e1076826fb8a248181b85d94df87b1f 197 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 59 3.0E-14 T 15-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM378_07370 0e1076826fb8a248181b85d94df87b1f 197 SUPERFAMILY SSF46689 3 80 4.09E-15 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AM378_07370 0e1076826fb8a248181b85d94df87b1f 197 Gene3D G3DSA:1.10.10.60 1 67 2.2E-26 T 15-10-2018 AM378_07370 0e1076826fb8a248181b85d94df87b1f 197 ProSitePatterns PS01081 TetR-type HTH domain signature. 25 55 - T 15-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site AM378_07370 0e1076826fb8a248181b85d94df87b1f 197 Gene3D G3DSA:1.10.357.10 71 195 8.9E-30 T 15-10-2018 AM378_14870 0ab23269fccd6b040f3f26b90c24630a 454 Pfam PF06123 Inner membrane protein CreD 6 429 1.9E-152 T 15-10-2018 IPR010364 Uncharacterised protein family, inner membrane CreD AM378_14870 0ab23269fccd6b040f3f26b90c24630a 454 PIRSF PIRSF004548 1 449 6.3E-170 T 15-10-2018 IPR010364 Uncharacterised protein family, inner membrane CreD AM378_17350 b2917c5c3c54f43d39818ef158929a9d 181 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 62 98 3.4E-16 T 15-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 AM378_17350 b2917c5c3c54f43d39818ef158929a9d 181 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 104 142 8.5E-15 T 15-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 AM378_17350 b2917c5c3c54f43d39818ef158929a9d 181 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 13 49 2.8E-16 T 15-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 AM378_17350 b2917c5c3c54f43d39818ef158929a9d 181 SUPERFAMILY SSF57783 12 50 4.93E-14 T 15-10-2018 AM378_17350 b2917c5c3c54f43d39818ef158929a9d 181 Gene3D G3DSA:3.30.65.10 54 98 1.3E-8 T 15-10-2018 AM378_17350 b2917c5c3c54f43d39818ef158929a9d 181 Gene3D G3DSA:3.30.65.10 3 53 4.4E-12 T 15-10-2018 AM378_17350 b2917c5c3c54f43d39818ef158929a9d 181 SUPERFAMILY SSF57783 60 100 2.21E-13 T 15-10-2018 AM378_15310 4dfb0c83b0f863db66659764b859c5eb 51 ProDom PD005979 PLASMID MEMBRANE TRANSMEMBRANE POST-SEGREGATION KILLING INHERITANCE ALTERING PERMEABILITY STABLE MAINTENANCE 2 49 6.0E-9 T 15-10-2018 IPR000021 Hok/gef cell toxic protein GO:0016020 AM378_15310 4dfb0c83b0f863db66659764b859c5eb 51 PRINTS PR00281 Hok/Gef cell toxic protein family signature 6 24 2.8E-13 T 15-10-2018 IPR000021 Hok/gef cell toxic protein GO:0016020 AM378_15310 4dfb0c83b0f863db66659764b859c5eb 51 PRINTS PR00281 Hok/Gef cell toxic protein family signature 26 48 2.8E-13 T 15-10-2018 IPR000021 Hok/gef cell toxic protein GO:0016020 AM378_15310 4dfb0c83b0f863db66659764b859c5eb 51 Pfam PF01848 Hok/gef family 8 47 7.8E-20 T 15-10-2018 IPR000021 Hok/gef cell toxic protein GO:0016020 AM378_15310 4dfb0c83b0f863db66659764b859c5eb 51 ProSitePatterns PS00556 Hok/gef family cell toxic proteins signature. 11 30 - T 15-10-2018 IPR018084 Hok/gef cell toxic protein, conserved site GO:0016020 AM378_00160 e6140559de62f627f0d902113c7c6f6c 120 Gene3D G3DSA:1.20.58.1630 27 120 8.9E-26 T 15-10-2018 IPR038432 PulS/OutS-like superfamily AM378_00160 e6140559de62f627f0d902113c7c6f6c 120 Pfam PF09691 Type II secretion system pilotin lipoprotein (PulS_OutS) 16 116 2.7E-21 T 15-10-2018 IPR019114 Chaperone lipoprotein, PulS/OutS-like AM378_06855 b3363b375b6fc4316e239cdfa8b09e20 25 Hamap MF_00656 Coenzyme PQQ synthesis protein A [pqqA]. 3 25 11.317 T 15-10-2018 IPR011725 Coenzyme PQQ biosynthesis protein A GO:0018189 AM378_06855 b3363b375b6fc4316e239cdfa8b09e20 25 Pfam PF08042 PqqA family 3 21 4.2E-10 T 15-10-2018 IPR011725 Coenzyme PQQ biosynthesis protein A GO:0018189 AM378_06855 b3363b375b6fc4316e239cdfa8b09e20 25 TIGRFAM TIGR02107 PQQ_syn_pqqA: coenzyme PQQ precursor peptide PqqA 4 24 4.6E-12 T 15-10-2018 IPR011725 Coenzyme PQQ biosynthesis protein A GO:0018189 AM378_21525 cb6373ebba91bec3c612f782530096df 147 Pfam PF06754 Phosphonate metabolism protein PhnG 6 146 1.7E-57 T 15-10-2018 IPR009609 Phosphonate metabolism PhnG GO:0015716|GO:0019634 KEGG: 00440+2.7.8.37|MetaCyc: PWY-7399|MetaCyc: PWY-7805|MetaCyc: PWY-7807 AM378_21525 cb6373ebba91bec3c612f782530096df 147 TIGRFAM TIGR03293 PhnG_redo: phosphonate C-P lyase system protein PhnG 6 147 3.9E-56 T 15-10-2018 IPR009609 Phosphonate metabolism PhnG GO:0015716|GO:0019634 KEGG: 00440+2.7.8.37|MetaCyc: PWY-7399|MetaCyc: PWY-7805|MetaCyc: PWY-7807 AM378_16280 b3e96855d45cadcbe4a7dd8958d76df2 103 Pfam PF17399 Domain of unknown function (DUF5405) 18 97 6.9E-15 T 15-10-2018 IPR035404 Domain of unknown function DUF5405 AM378_16280 b3e96855d45cadcbe4a7dd8958d76df2 103 ProDom PD067735 GP81 ORF2 GPA 5'REGION ORF81 3 99 2.0E-4 T 15-10-2018 AM378_00540 8fcb9f9f6db57fd7300212f145876e2b 70 Pfam PF13275 S4 domain 9 68 2.1E-25 T 15-10-2018 AM378_00540 8fcb9f9f6db57fd7300212f145876e2b 70 Gene3D G3DSA:3.10.290.10 1 68 6.5E-27 T 15-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 AM378_00540 8fcb9f9f6db57fd7300212f145876e2b 70 SUPERFAMILY SSF55174 7 68 1.31E-20 T 15-10-2018 AM378_06365 fb3d6c9198c139ba0c750eda936e24f1 248 Pfam PF01925 Sulfite exporter TauE/SafE 13 241 3.0E-27 T 15-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 AM378_17280 e4844e97c770eef87eec311005a1dc61 213 TIGRFAM TIGR01182 eda: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase 9 209 7.3E-86 T 15-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 AM378_17280 e4844e97c770eef87eec311005a1dc61 213 Gene3D G3DSA:3.20.20.70 1 212 7.8E-74 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM378_17280 e4844e97c770eef87eec311005a1dc61 213 ProSitePatterns PS00160 KDPG and KHG aldolases Schiff-base forming residue. 128 141 - T 15-10-2018 IPR031338 KDPG/KHG aldolase, active site 2 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 AM378_17280 e4844e97c770eef87eec311005a1dc61 213 Pfam PF01081 KDPG and KHG aldolase 9 203 5.0E-90 T 15-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 AM378_17280 e4844e97c770eef87eec311005a1dc61 213 SUPERFAMILY SSF51569 4 209 2.75E-69 T 15-10-2018 AM378_17280 e4844e97c770eef87eec311005a1dc61 213 ProSitePatterns PS00159 KDPG and KHG aldolases active site. 40 49 - T 15-10-2018 IPR031337 KDPG/KHG aldolase, active site 1 KEGG: 00030+4.1.2.14|KEGG: 00330+4.1.3.16|KEGG: 00630+4.1.3.16|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 AM378_15605 fdabfaa7f671c7e42a1d4e45e36f3ab2 197 Hamap MF_01405 dITP/XTP pyrophosphatase. 2 196 50.619 T 15-10-2018 IPR020922 dITP/XTP pyrophosphatase GO:0009143|GO:0017111 KEGG: 00230+3.6.1.66 AM378_15605 fdabfaa7f671c7e42a1d4e45e36f3ab2 197 SUPERFAMILY SSF52972 1 195 2.35E-73 T 15-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like AM378_15605 fdabfaa7f671c7e42a1d4e45e36f3ab2 197 TIGRFAM TIGR00042 TIGR00042: non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family 3 193 4.7E-67 T 15-10-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 KEGG: 00230+3.6.1.66|Reactome: R-HSA-74259 AM378_15605 fdabfaa7f671c7e42a1d4e45e36f3ab2 197 Gene3D G3DSA:3.90.950.10 1 197 7.3E-82 T 15-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like AM378_15605 fdabfaa7f671c7e42a1d4e45e36f3ab2 197 Pfam PF01725 Ham1 family 4 192 4.2E-57 T 15-10-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 KEGG: 00230+3.6.1.66|Reactome: R-HSA-74259 AM378_01515 717b9c2558cbed3ec5fb93f82d0732dd 151 SUPERFAMILY SSF55729 1 136 4.63E-25 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase AM378_01515 717b9c2558cbed3ec5fb93f82d0732dd 151 Gene3D G3DSA:3.40.630.30 2 143 9.6E-33 T 15-10-2018 AM378_01515 717b9c2558cbed3ec5fb93f82d0732dd 151 Pfam PF00583 Acetyltransferase (GNAT) family 19 135 5.7E-14 T 15-10-2018 IPR000182 GNAT domain AM378_05450 1f6ddca67c989bb707ab756fab700e96 314 SUPERFAMILY SSF53807 41 313 1.13E-92 T 15-10-2018 AM378_05450 1f6ddca67c989bb707ab756fab700e96 314 PRINTS PR00691 Adhesin B signature 44 65 4.5E-36 T 15-10-2018 IPR006129 Adhesin B GO:0007155 AM378_05450 1f6ddca67c989bb707ab756fab700e96 314 PRINTS PR00691 Adhesin B signature 248 265 4.5E-36 T 15-10-2018 IPR006129 Adhesin B GO:0007155 AM378_05450 1f6ddca67c989bb707ab756fab700e96 314 PRINTS PR00691 Adhesin B signature 225 243 4.5E-36 T 15-10-2018 IPR006129 Adhesin B GO:0007155 AM378_05450 1f6ddca67c989bb707ab756fab700e96 314 PRINTS PR00691 Adhesin B signature 88 107 4.5E-36 T 15-10-2018 IPR006129 Adhesin B GO:0007155 AM378_05450 1f6ddca67c989bb707ab756fab700e96 314 PRINTS PR00691 Adhesin B signature 270 288 4.5E-36 T 15-10-2018 IPR006129 Adhesin B GO:0007155 AM378_05450 1f6ddca67c989bb707ab756fab700e96 314 PRINTS PR00691 Adhesin B signature 199 216 4.5E-36 T 15-10-2018 IPR006129 Adhesin B GO:0007155 AM378_05450 1f6ddca67c989bb707ab756fab700e96 314 PRINTS PR00691 Adhesin B signature 69 87 4.5E-36 T 15-10-2018 IPR006129 Adhesin B GO:0007155 AM378_05450 1f6ddca67c989bb707ab756fab700e96 314 Gene3D G3DSA:3.40.50.1980 201 314 7.2E-42 T 15-10-2018 AM378_05450 1f6ddca67c989bb707ab756fab700e96 314 Pfam PF01297 Zinc-uptake complex component A periplasmic 47 310 7.1E-80 T 15-10-2018 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 AM378_05450 1f6ddca67c989bb707ab756fab700e96 314 PRINTS PR00690 Adhesin family signature 88 105 4.7E-44 T 15-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 AM378_05450 1f6ddca67c989bb707ab756fab700e96 314 PRINTS PR00690 Adhesin family signature 199 220 4.7E-44 T 15-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 AM378_05450 1f6ddca67c989bb707ab756fab700e96 314 PRINTS PR00690 Adhesin family signature 44 62 4.7E-44 T 15-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 AM378_05450 1f6ddca67c989bb707ab756fab700e96 314 PRINTS PR00690 Adhesin family signature 278 297 4.7E-44 T 15-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 AM378_05450 1f6ddca67c989bb707ab756fab700e96 314 PRINTS PR00690 Adhesin family signature 75 88 4.7E-44 T 15-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 AM378_05450 1f6ddca67c989bb707ab756fab700e96 314 PRINTS PR00690 Adhesin family signature 252 270 4.7E-44 T 15-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 AM378_05450 1f6ddca67c989bb707ab756fab700e96 314 Gene3D G3DSA:3.40.50.1980 43 200 1.0E-55 T 15-10-2018 AM378_05490 dfb647b9df7ee1f535fd6eb48c2d2ae3 229 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 9 217 1.1E-34 T 15-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 AM378_05490 dfb647b9df7ee1f535fd6eb48c2d2ae3 229 Pfam PF01914 MarC family integral membrane protein 8 221 5.7E-65 T 15-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 AM378_15805 2e4d6a8bce347553813585a460d16d10 508 Pfam PF03806 AbgT putative transporter family 15 505 2.0E-188 T 15-10-2018 IPR004697 p-Aminobenzoyl-glutamate transport protein AbgT GO:0015558|GO:1902604 AM378_16935 f9719188833d5bf4ef6ab367d7cb171b 113 Gene3D G3DSA:1.10.287.700 72 113 2.4E-6 T 15-10-2018 AM378_01080 e06511651891ca651f0d3c997423a3ac 227 TIGRFAM TIGR02796 tolQ: protein TolQ 5 219 1.2E-94 T 15-10-2018 IPR014163 Tol-Pal system, TolQ GO:0016021|GO:0043213 AM378_01080 e06511651891ca651f0d3c997423a3ac 227 Pfam PF01618 MotA/TolQ/ExbB proton channel family 79 207 1.9E-42 T 15-10-2018 IPR002898 MotA/TolQ/ExbB proton channel AM378_01080 e06511651891ca651f0d3c997423a3ac 227 Hamap MF_02202 Tol-Pal system protein TolQ [tolQ]. 4 224 43.762 T 15-10-2018 IPR014163 Tol-Pal system, TolQ GO:0016021|GO:0043213 AM378_19785 3062d22bb02d0ca79b58d50864feeb54 147 Gene3D G3DSA:3.40.50.620 1 147 1.0E-19 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM378_19785 3062d22bb02d0ca79b58d50864feeb54 147 Pfam PF00582 Universal stress protein family 1 146 5.0E-15 T 15-10-2018 IPR006016 UspA AM378_19785 3062d22bb02d0ca79b58d50864feeb54 147 SUPERFAMILY SSF52402 1 146 6.53E-19 T 15-10-2018 AM378_04160 4c7d1fc18d0f3fa0a9b79b68186599a4 852 Hamap MF_01072 Glucans biosynthesis glucosyltransferase H [mdoH]. 75 754 52.052 T 15-10-2018 IPR023725 Glucan biosynthesis glucosyltransferase H GO:0016758 AM378_04160 4c7d1fc18d0f3fa0a9b79b68186599a4 852 Gene3D G3DSA:3.90.550.10 249 477 4.9E-13 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AM378_04160 4c7d1fc18d0f3fa0a9b79b68186599a4 852 SUPERFAMILY SSF53448 253 541 1.41E-26 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AM378_04160 4c7d1fc18d0f3fa0a9b79b68186599a4 852 Pfam PF00535 Glycosyl transferase family 2 255 437 1.1E-23 T 15-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 AM378_23345 4b3a8b092474e7df0ff00a6ad3a83bb4 220 Pfam PF04338 Protein of unknown function, DUF481 15 219 1.6E-58 T 15-10-2018 IPR007433 Protein of unknown function DUF481 AM378_21400 f8fac483bffbee973a9617a123534d81 79 ProSitePatterns PS01148 Uncharacterized protein family UPF0033 signature. 12 36 - T 15-10-2018 IPR001455 TusA-like domain AM378_21400 f8fac483bffbee973a9617a123534d81 79 Pfam PF01206 Sulfurtransferase TusA 11 79 2.7E-20 T 15-10-2018 IPR001455 TusA-like domain AM378_21400 f8fac483bffbee973a9617a123534d81 79 Gene3D G3DSA:3.30.110.40 7 79 1.7E-31 T 15-10-2018 IPR036868 TusA-like domain superfamily AM378_21400 f8fac483bffbee973a9617a123534d81 79 SUPERFAMILY SSF64307 4 79 1.57E-24 T 15-10-2018 IPR036868 TusA-like domain superfamily AM378_18755 f5d5c63195ce52cd6ec2e08b242d7af0 336 PIRSF PIRSF004532 1 332 3.3E-141 T 15-10-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 AM378_18755 f5d5c63195ce52cd6ec2e08b242d7af0 336 Pfam PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded 3 322 6.8E-134 T 15-10-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 AM378_18755 f5d5c63195ce52cd6ec2e08b242d7af0 336 TIGRFAM TIGR00330 glpX: fructose-1,6-bisphosphatase, class II 1 330 1.3E-178 T 15-10-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 AM378_18755 f5d5c63195ce52cd6ec2e08b242d7af0 336 SUPERFAMILY SSF56655 1 325 1.34E-110 T 15-10-2018 AM378_18755 f5d5c63195ce52cd6ec2e08b242d7af0 336 Gene3D G3DSA:3.30.540.10 7 320 6.6E-132 T 15-10-2018 AM378_18755 f5d5c63195ce52cd6ec2e08b242d7af0 336 Gene3D G3DSA:3.40.190.90 110 277 6.6E-132 T 15-10-2018 AM378_18000 38e3cee09b11cb33f9f45c8ad5504270 102 SUPERFAMILY SSF52794 3 92 7.32E-16 T 15-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 AM378_18000 38e3cee09b11cb33f9f45c8ad5504270 102 Gene3D G3DSA:3.40.50.2300 2 92 1.3E-19 T 15-10-2018 AM378_18000 38e3cee09b11cb33f9f45c8ad5504270 102 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 4 81 2.2E-13 T 15-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 AM378_20850 2ef0042c9c45444c5dac2fb07e5a169a 286 Gene3D G3DSA:1.10.1200.10 213 285 7.8E-26 T 15-10-2018 IPR036736 ACP-like superfamily AM378_20850 2ef0042c9c45444c5dac2fb07e5a169a 286 PIRSF PIRSF001111 1 286 5.4E-135 T 15-10-2018 IPR016291 Isochorismatase GO:0008908 AM378_20850 2ef0042c9c45444c5dac2fb07e5a169a 286 SUPERFAMILY SSF52499 1 208 3.79E-65 T 15-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 AM378_20850 2ef0042c9c45444c5dac2fb07e5a169a 286 Gene3D G3DSA:3.40.50.850 1 207 6.3E-80 T 15-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 AM378_20850 2ef0042c9c45444c5dac2fb07e5a169a 286 SUPERFAMILY SSF47336 216 283 1.13E-8 T 15-10-2018 IPR036736 ACP-like superfamily AM378_20850 2ef0042c9c45444c5dac2fb07e5a169a 286 Pfam PF00857 Isochorismatase family 32 204 9.9E-39 T 15-10-2018 IPR000868 Isochorismatase-like GO:0003824 AM378_20850 2ef0042c9c45444c5dac2fb07e5a169a 286 PRINTS PR01398 Isochorismatase signature 63 80 9.3E-52 T 15-10-2018 IPR016291 Isochorismatase GO:0008908 AM378_20850 2ef0042c9c45444c5dac2fb07e5a169a 286 PRINTS PR01398 Isochorismatase signature 2 14 9.3E-52 T 15-10-2018 IPR016291 Isochorismatase GO:0008908 AM378_20850 2ef0042c9c45444c5dac2fb07e5a169a 286 PRINTS PR01398 Isochorismatase signature 112 134 9.3E-52 T 15-10-2018 IPR016291 Isochorismatase GO:0008908 AM378_20850 2ef0042c9c45444c5dac2fb07e5a169a 286 PRINTS PR01398 Isochorismatase signature 168 186 9.3E-52 T 15-10-2018 IPR016291 Isochorismatase GO:0008908 AM378_20850 2ef0042c9c45444c5dac2fb07e5a169a 286 PRINTS PR01398 Isochorismatase signature 80 99 9.3E-52 T 15-10-2018 IPR016291 Isochorismatase GO:0008908 AM378_20850 2ef0042c9c45444c5dac2fb07e5a169a 286 PRINTS PR01398 Isochorismatase signature 186 203 9.3E-52 T 15-10-2018 IPR016291 Isochorismatase GO:0008908 AM378_20850 2ef0042c9c45444c5dac2fb07e5a169a 286 Pfam PF00550 Phosphopantetheine attachment site 217 277 4.9E-6 T 15-10-2018 IPR009081 Phosphopantetheine binding ACP domain AM378_03635 51c4ef0df5dc2fda7964b0c209e2e0a1 192 SUPERFAMILY SSF52218 1 168 1.71E-32 T 15-10-2018 IPR029039 Flavoprotein-like superfamily AM378_03635 51c4ef0df5dc2fda7964b0c209e2e0a1 192 Gene3D G3DSA:3.40.50.360 1 183 1.5E-46 T 15-10-2018 IPR029039 Flavoprotein-like superfamily AM378_03635 51c4ef0df5dc2fda7964b0c209e2e0a1 192 TIGRFAM TIGR03567 FMN_reduc_SsuE: FMN reductase 2 169 1.5E-71 T 15-10-2018 IPR020048 NADPH-dependent FMN reductase, SsuE GO:0008752|GO:0046306|GO:0055114 KEGG: 00740+1.5.1.38|MetaCyc: PWY-7723 AM378_03635 51c4ef0df5dc2fda7964b0c209e2e0a1 192 Pfam PF03358 NADPH-dependent FMN reductase 1 141 3.0E-33 T 15-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 AM378_08720 aa164608c3981026cd57723d9fa118f4 131 Gene3D G3DSA:1.20.120.550 1 130 2.7E-24 T 15-10-2018 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain superfamily AM378_08720 aa164608c3981026cd57723d9fa118f4 131 Pfam PF01124 MAPEG family 3 119 3.8E-25 T 15-10-2018 IPR001129 Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein AM378_08720 aa164608c3981026cd57723d9fa118f4 131 SUPERFAMILY SSF161084 4 127 2.35E-29 T 15-10-2018 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain superfamily AM378_20000 06b5ee9d89971605290806f0cefd5527 350 Pfam PF02706 Chain length determinant protein 16 70 1.2E-11 T 15-10-2018 IPR003856 Polysaccharide chain length determinant N-terminal domain GO:0009103|GO:0016020 AM378_20000 06b5ee9d89971605290806f0cefd5527 350 Hamap MF_02025 ECA polysaccharide chain length modulation protein [wzzE]. 9 349 58.149 T 15-10-2018 IPR032895 ECA polysaccharide chain length modulation protein WzzE GO:0009246|GO:0016021 AM378_20000 06b5ee9d89971605290806f0cefd5527 350 SUPERFAMILY SSF160355 55 320 9.94E-82 T 15-10-2018 AM378_17850 fe0d6bb500f33c9c95f3ad0f89b5376b 277 Gene3D G3DSA:3.30.1490.300 82 137 1.5E-9 T 15-10-2018 AM378_17850 fe0d6bb500f33c9c95f3ad0f89b5376b 277 Gene3D G3DSA:3.30.420.40 8 169 1.5E-9 T 15-10-2018 AM378_17850 fe0d6bb500f33c9c95f3ad0f89b5376b 277 SUPERFAMILY SSF53067 59 165 1.94E-5 T 15-10-2018 AM378_17850 fe0d6bb500f33c9c95f3ad0f89b5376b 277 Pfam PF11104 Type IV pilus assembly protein PilM; 9 167 1.6E-12 T 15-10-2018 IPR005883 Type IV pilus assembly protein PilM AM378_19160 42b3b784195d551eda123554ff3d190e 196 Hamap MF_00316 Molybdenum cofactor guanylyltransferase [mobA]. 3 188 29.52 T 15-10-2018 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 KEGG: 00790+2.7.7.77|MetaCyc: PWY-5964|MetaCyc: PWY-7639 AM378_19160 42b3b784195d551eda123554ff3d190e 196 Gene3D G3DSA:3.90.550.10 1 195 3.2E-60 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AM378_19160 42b3b784195d551eda123554ff3d190e 196 Pfam PF12804 MobA-like NTP transferase domain 7 158 9.2E-34 T 15-10-2018 IPR025877 MobA-like NTP transferase AM378_19160 42b3b784195d551eda123554ff3d190e 196 TIGRFAM TIGR02665 molyb_mobA: molybdenum cofactor guanylyltransferase 5 185 1.1E-69 T 15-10-2018 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 KEGG: 00790+2.7.7.77|MetaCyc: PWY-5964|MetaCyc: PWY-7639 AM378_19160 42b3b784195d551eda123554ff3d190e 196 SUPERFAMILY SSF53448 5 184 3.13E-33 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AM378_13570 0d794142ca121c5205c4a1c08a48d07e 86 Pfam PF12838 4Fe-4S dicluster domain 8 56 3.9E-7 T 15-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AM378_13570 0d794142ca121c5205c4a1c08a48d07e 86 SUPERFAMILY SSF54862 5 66 4.19E-18 T 15-10-2018 AM378_13570 0d794142ca121c5205c4a1c08a48d07e 86 Gene3D G3DSA:3.30.70.20 2 86 5.3E-37 T 15-10-2018 AM378_13570 0d794142ca121c5205c4a1c08a48d07e 86 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 9 20 - T 15-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AM378_17360 fc86cf03603fc930a366344b39103406 373 SUPERFAMILY SSF102405 78 283 6.72E-44 T 15-10-2018 AM378_17360 fc86cf03603fc930a366344b39103406 373 TIGRFAM TIGR00732 dprA: DNA protecting protein DprA 66 282 7.1E-78 T 15-10-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 AM378_17360 fc86cf03603fc930a366344b39103406 373 Gene3D G3DSA:1.10.10.10 293 360 5.3E-5 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_17360 fc86cf03603fc930a366344b39103406 373 Pfam PF02481 DNA recombination-mediator protein A 71 274 8.7E-75 T 15-10-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 AM378_17360 fc86cf03603fc930a366344b39103406 373 Gene3D G3DSA:3.40.50.450 4 285 2.1E-92 T 15-10-2018 AM378_21160 b9b214f1d312644240d9b337d9e4c711 650 Pfam PF02872 5'-nucleotidase, C-terminal domain 358 552 1.5E-21 T 15-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AM378_21160 b9b214f1d312644240d9b337d9e4c711 650 TIGRFAM TIGR01390 CycNucDiestase: 2',3'-cyclic-nucleotide 2'-phosphodiesterase 24 648 0.0 T 15-10-2018 IPR006294 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase GO:0008663|GO:0009117 KEGG: 00230+3.1.4.16+3.1.3.6|KEGG: 00240+3.1.4.16+3.1.3.6 AM378_21160 b9b214f1d312644240d9b337d9e4c711 650 PRINTS PR01607 Apyrase family signature 24 42 1.6E-33 T 15-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AM378_21160 b9b214f1d312644240d9b337d9e4c711 650 PRINTS PR01607 Apyrase family signature 245 268 1.6E-33 T 15-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AM378_21160 b9b214f1d312644240d9b337d9e4c711 650 PRINTS PR01607 Apyrase family signature 285 305 1.6E-33 T 15-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AM378_21160 b9b214f1d312644240d9b337d9e4c711 650 PRINTS PR01607 Apyrase family signature 217 234 1.6E-33 T 15-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AM378_21160 b9b214f1d312644240d9b337d9e4c711 650 PRINTS PR01607 Apyrase family signature 532 551 1.6E-33 T 15-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AM378_21160 b9b214f1d312644240d9b337d9e4c711 650 PRINTS PR01607 Apyrase family signature 430 453 1.6E-33 T 15-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AM378_21160 b9b214f1d312644240d9b337d9e4c711 650 ProSitePatterns PS00786 5'-nucleotidase signature 2. 111 122 - T 15-10-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AM378_21160 b9b214f1d312644240d9b337d9e4c711 650 ProSitePatterns PS00785 5'-nucleotidase signature 1. 26 38 - T 15-10-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AM378_21160 b9b214f1d312644240d9b337d9e4c711 650 SUPERFAMILY SSF56300 20 356 8.44E-85 T 15-10-2018 AM378_21160 b9b214f1d312644240d9b337d9e4c711 650 Pfam PF00149 Calcineurin-like phosphoesterase 26 261 8.4E-9 T 15-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 AM378_21160 b9b214f1d312644240d9b337d9e4c711 650 Gene3D G3DSA:3.60.21.10 17 356 5.5E-142 T 15-10-2018 IPR029052 Metallo-dependent phosphatase-like AM378_21160 b9b214f1d312644240d9b337d9e4c711 650 Gene3D G3DSA:3.90.780.10 415 590 4.3E-52 T 15-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AM378_21160 b9b214f1d312644240d9b337d9e4c711 650 SUPERFAMILY SSF55816 357 598 4.58E-40 T 15-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AM378_18470 0eaca9dd245d106631c42484fd7a19db 255 Pfam PF02611 CDP-diacylglycerol pyrophosphatase 30 248 7.2E-87 T 15-10-2018 IPR003763 CDP-diacylglycerol pyrophosphatase GO:0008654|GO:0008715|GO:0016020 KEGG: 00564+3.6.1.26 AM378_18470 0eaca9dd245d106631c42484fd7a19db 255 PIRSF PIRSF001273 2 252 2.5E-90 T 15-10-2018 IPR003763 CDP-diacylglycerol pyrophosphatase GO:0008654|GO:0008715|GO:0016020 KEGG: 00564+3.6.1.26 AM378_18470 0eaca9dd245d106631c42484fd7a19db 255 Hamap MF_00319 CDP-diacylglycerol pyrophosphatase [cdh]. 3 250 41.493 T 15-10-2018 IPR003763 CDP-diacylglycerol pyrophosphatase GO:0008654|GO:0008715|GO:0016020 KEGG: 00564+3.6.1.26 AM378_18470 0eaca9dd245d106631c42484fd7a19db 255 SUPERFAMILY SSF54197 30 248 6.8E-84 T 15-10-2018 IPR036265 HIT-like superfamily AM378_18470 0eaca9dd245d106631c42484fd7a19db 255 Gene3D G3DSA:3.30.428.30 25 250 2.0E-85 T 15-10-2018 IPR038433 CDP-diacylglycerol pyrophosphatase superfamily KEGG: 00564+3.6.1.26 AM378_08115 a74157b2b20f1ef8895b4069647279e2 268 SUPERFAMILY SSF51366 1 266 7.63E-94 T 15-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 AM378_08115 a74157b2b20f1ef8895b4069647279e2 268 Hamap MF_00131 Tryptophan synthase alpha chain [trpA]. 14 265 38.175 T 15-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 AM378_08115 a74157b2b20f1ef8895b4069647279e2 268 ProSitePatterns PS00167 Tryptophan synthase alpha chain signature. 48 61 - T 15-10-2018 IPR018204 Tryptophan synthase, alpha chain, active site GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 AM378_08115 a74157b2b20f1ef8895b4069647279e2 268 TIGRFAM TIGR00262 trpA: tryptophan synthase, alpha subunit 8 263 6.5E-107 T 15-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 AM378_08115 a74157b2b20f1ef8895b4069647279e2 268 Gene3D G3DSA:3.20.20.70 1 268 1.1E-102 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM378_08115 a74157b2b20f1ef8895b4069647279e2 268 Pfam PF00290 Tryptophan synthase alpha chain 8 266 1.2E-98 T 15-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 AM378_01430 a9dbbe06f7ae0f1ae2a57db04e6d59d5 692 SUPERFAMILY SSF161098 434 674 2.06E-44 T 15-10-2018 IPR035906 MetI-like superfamily AM378_01430 a9dbbe06f7ae0f1ae2a57db04e6d59d5 692 Gene3D G3DSA:1.10.3720.10 139 411 1.4E-49 T 15-10-2018 IPR035906 MetI-like superfamily AM378_01430 a9dbbe06f7ae0f1ae2a57db04e6d59d5 692 Gene3D G3DSA:1.10.3720.10 425 688 6.8E-46 T 15-10-2018 IPR035906 MetI-like superfamily AM378_01430 a9dbbe06f7ae0f1ae2a57db04e6d59d5 692 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 501 677 5.0E-12 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AM378_01430 a9dbbe06f7ae0f1ae2a57db04e6d59d5 692 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 210 399 5.9E-17 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AM378_01430 a9dbbe06f7ae0f1ae2a57db04e6d59d5 692 SUPERFAMILY SSF161098 139 405 1.06E-40 T 15-10-2018 IPR035906 MetI-like superfamily AM378_09555 73b30e58e35126e10b7ffdbe1e79027f 471 Pfam PF07196 Flagellin hook IN motif 129 186 4.1E-9 T 15-10-2018 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 AM378_09555 73b30e58e35126e10b7ffdbe1e79027f 471 Pfam PF02465 Flagellar hook-associated protein 2 N-terminus 11 104 6.3E-22 T 15-10-2018 IPR003481 Flagellar hook-associated protein 2, N-terminal GO:0009424 AM378_09555 73b30e58e35126e10b7ffdbe1e79027f 471 Pfam PF07195 Flagellar hook-associated protein 2 C-terminus 228 458 6.7E-62 T 15-10-2018 IPR010809 Flagellar hook-associated protein 2, C-terminal GO:0007155|GO:0009288 AM378_23240 111ce89606c3d8f8f3efae8e5be58932 170 Gene3D G3DSA:1.10.10.10 120 170 2.5E-21 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_23240 111ce89606c3d8f8f3efae8e5be58932 170 Gene3D G3DSA:1.10.10.10 74 119 7.9E-18 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_23240 111ce89606c3d8f8f3efae8e5be58932 170 Gene3D G3DSA:1.10.10.10 1 73 4.3E-24 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_23240 111ce89606c3d8f8f3efae8e5be58932 170 Pfam PF02631 RecX family 56 166 1.5E-32 T 15-10-2018 IPR003783 Regulatory protein RecX GO:0006282 AM378_23240 111ce89606c3d8f8f3efae8e5be58932 170 Hamap MF_01114 Regulatory protein RecX [recX]. 2 170 15.281 T 15-10-2018 IPR003783 Regulatory protein RecX GO:0006282 AM378_11595 f6aca6f1ae675efc21a5c87900d3212f 135 ProDom PD076485 YNEG CYTOPLASMIC ECS2130 STY1535 7 115 6.0E-37 T 15-10-2018 IPR020378 Protein of unknown function DUF4186 AM378_11595 f6aca6f1ae675efc21a5c87900d3212f 135 Pfam PF13811 Domain of unknown function (DUF4186) 9 114 1.0E-48 T 15-10-2018 IPR020378 Protein of unknown function DUF4186 AM378_01075 fe5445219b380616fd9be6f1c15cba20 134 TIGRFAM TIGR02799 thio_ybgC: tol-pal system-associated acyl-CoA thioesterase 6 130 5.9E-51 T 15-10-2018 IPR014166 Tol-Pal system-associated acyl-CoA thioesterase GO:0016790 AM378_01075 fe5445219b380616fd9be6f1c15cba20 134 TIGRFAM TIGR00051 TIGR00051: acyl-CoA thioester hydrolase, YbgC/YbaW family 9 125 4.7E-44 T 15-10-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 AM378_01075 fe5445219b380616fd9be6f1c15cba20 134 Pfam PF03061 Thioesterase superfamily 21 103 1.6E-19 T 15-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 AM378_01075 fe5445219b380616fd9be6f1c15cba20 134 PIRSF PIRSF003230 1 134 1.0E-47 T 15-10-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 AM378_01075 fe5445219b380616fd9be6f1c15cba20 134 ProSitePatterns PS01328 4-hydroxybenzoyl-CoA thioesterase family active site. 11 28 - T 15-10-2018 IPR008272 4-hydroxybenzoyl-CoA thioesterase, active site GO:0016787 AM378_01075 fe5445219b380616fd9be6f1c15cba20 134 Gene3D G3DSA:3.10.129.10 1 134 7.6E-43 T 15-10-2018 AM378_01075 fe5445219b380616fd9be6f1c15cba20 134 SUPERFAMILY SSF54637 4 133 3.65E-40 T 15-10-2018 IPR029069 HotDog domain superfamily AM378_01755 adf05f38280f4a2f72b30be886975d9e 282 SMART SM00090 5 234 6.2E-10 T 15-10-2018 IPR000687 RIO kinase GO:0004674|GO:0005524 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1|KEGG: 04714+2.7.11.1|KEGG: 04926+2.7.11.1|KEGG: 05163+2.7.11.1|KEGG: 05165+2.7.11.1|KEGG: 05170+2.7.11.1|Reactome: R-HSA-6791226 AM378_01755 adf05f38280f4a2f72b30be886975d9e 282 ProSitePatterns PS01245 RIO1/ZK632.3/MJ0444 family signature. 164 175 - T 15-10-2018 IPR018935 RIO kinase, conserved site GO:0004674|GO:0005524 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1|KEGG: 04714+2.7.11.1|KEGG: 04926+2.7.11.1|KEGG: 05163+2.7.11.1|KEGG: 05165+2.7.11.1|KEGG: 05170+2.7.11.1|Reactome: R-HSA-6791226 AM378_01755 adf05f38280f4a2f72b30be886975d9e 282 Gene3D G3DSA:1.10.510.10 142 229 3.4E-18 T 15-10-2018 AM378_01755 adf05f38280f4a2f72b30be886975d9e 282 Pfam PF01163 RIO1 family 31 219 1.0E-39 T 15-10-2018 AM378_01755 adf05f38280f4a2f72b30be886975d9e 282 SUPERFAMILY SSF56112 19 212 5.39E-17 T 15-10-2018 IPR011009 Protein kinase-like domain superfamily AM378_09040 ea753023b7b4a082714cfed53872bc8f 324 SUPERFAMILY SSF53474 31 323 5.64E-66 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold AM378_09040 ea753023b7b4a082714cfed53872bc8f 324 Pfam PF07859 alpha/beta hydrolase fold 90 296 3.0E-69 T 15-10-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0016787 AM378_09040 ea753023b7b4a082714cfed53872bc8f 324 ProSitePatterns PS01173 Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 89 105 - T 15-10-2018 IPR002168 Lipase, GDXG, putative histidine active site GO:0016787 Reactome: R-HSA-163560 AM378_09040 ea753023b7b4a082714cfed53872bc8f 324 Gene3D G3DSA:3.40.50.1820 3 323 6.4E-100 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold AM378_19965 03e0112a6c0e812338808567d1ab2d26 93 Gene3D G3DSA:3.10.50.40 2 93 2.9E-34 T 15-10-2018 AM378_19965 03e0112a6c0e812338808567d1ab2d26 93 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 31 51 - T 15-10-2018 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site Reactome: R-HSA-1169408|Reactome: R-HSA-6804756|Reactome: R-HSA-6811555|Reactome: R-HSA-936440 AM378_19965 03e0112a6c0e812338808567d1ab2d26 93 SUPERFAMILY SSF54534 5 90 8.5E-28 T 15-10-2018 AM378_19965 03e0112a6c0e812338808567d1ab2d26 93 Pfam PF13616 PPIC-type PPIASE domain 15 90 4.0E-23 T 15-10-2018 AM378_19745 17e2d9f9fbe421f0ccf444e94656461d 447 SUPERFAMILY SSF50969 94 258 5.41E-5 T 15-10-2018 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like AM378_19745 17e2d9f9fbe421f0ccf444e94656461d 447 Pfam PF13449 Esterase-like activity of phytase 90 421 3.4E-66 T 15-10-2018 IPR027372 Phytase-like domain AM378_17795 30ce3ca1b8e0a62cd6142836b7091266 335 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 66 85 6.7E-29 T 15-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 AM378_17795 30ce3ca1b8e0a62cd6142836b7091266 335 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 142 163 6.7E-29 T 15-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 AM378_17795 30ce3ca1b8e0a62cd6142836b7091266 335 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 16 32 6.7E-29 T 15-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 AM378_17795 30ce3ca1b8e0a62cd6142836b7091266 335 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 195 205 6.7E-29 T 15-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 AM378_17795 30ce3ca1b8e0a62cd6142836b7091266 335 Hamap MF_00140_B Tryptophan--tRNA ligase [trpS]. 3 331 42.767 T 15-10-2018 IPR024109 Tryptophan-tRNA ligase, bacterial-type GO:0004830 KEGG: 00970+6.1.1.2|Reactome: R-HSA-379726 AM378_17795 30ce3ca1b8e0a62cd6142836b7091266 335 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 12 21 - T 15-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM378_17795 30ce3ca1b8e0a62cd6142836b7091266 335 SUPERFAMILY SSF52374 5 330 8.66E-101 T 15-10-2018 AM378_17795 30ce3ca1b8e0a62cd6142836b7091266 335 Gene3D G3DSA:3.40.50.620 6 329 1.3E-142 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM378_17795 30ce3ca1b8e0a62cd6142836b7091266 335 Pfam PF00579 tRNA synthetases class I (W and Y) 3 285 1.4E-85 T 15-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM378_17795 30ce3ca1b8e0a62cd6142836b7091266 335 Gene3D G3DSA:1.10.240.10 186 298 1.3E-142 T 15-10-2018 AM378_17795 30ce3ca1b8e0a62cd6142836b7091266 335 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 3 330 1.1E-117 T 15-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 AM378_13820 d416be58df5462e226b4846c99063eed 161 Pfam PF01235 Sodium:alanine symporter family 15 82 2.9E-12 T 15-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AM378_19285 f6e57b5b6ac72a647b1db77b47e1773b 156 Hamap MF_01398 ATP synthase subunit b [atpF]. 1 138 13.307 T 15-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 AM378_19285 f6e57b5b6ac72a647b1db77b47e1773b 156 TIGRFAM TIGR01144 ATP_synt_b: ATP synthase F0, B subunit 10 156 4.3E-61 T 15-10-2018 IPR005864 ATP synthase, F0 complex, subunit b, bacterial GO:0015078|GO:0015986|GO:0045263 AM378_19285 f6e57b5b6ac72a647b1db77b47e1773b 156 Pfam PF00430 ATP synthase B/B' CF(0) 6 137 8.7E-39 T 15-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 AM378_19285 f6e57b5b6ac72a647b1db77b47e1773b 156 Gene3D G3DSA:1.20.5.620 62 122 1.5E-24 T 15-10-2018 AM378_19285 f6e57b5b6ac72a647b1db77b47e1773b 156 SUPERFAMILY SSF81573 63 121 2.62E-15 T 15-10-2018 IPR028987 F-type ATP synthase subunit B-like, membrane domain superfamily AM378_04100 c33c54a180e6fcc02509798e3a3fdb91 455 Gene3D G3DSA:1.20.1600.10 52 451 8.1E-95 T 15-10-2018 AM378_04100 c33c54a180e6fcc02509798e3a3fdb91 455 SUPERFAMILY SSF56954 3 451 7.59E-82 T 15-10-2018 AM378_04100 c33c54a180e6fcc02509798e3a3fdb91 455 Gene3D G3DSA:2.20.200.10 97 341 8.1E-95 T 15-10-2018 AM378_04100 c33c54a180e6fcc02509798e3a3fdb91 455 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 11 451 7.2E-66 T 15-10-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0016020|GO:0022857|GO:0055085 AM378_04100 c33c54a180e6fcc02509798e3a3fdb91 455 Pfam PF02321 Outer membrane efflux protein 271 446 6.0E-21 T 15-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 AM378_04100 c33c54a180e6fcc02509798e3a3fdb91 455 Pfam PF02321 Outer membrane efflux protein 60 244 3.3E-20 T 15-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 AM378_16765 1aafb883928e5461a89c15e45c7364f5 112 SMART SM00530 54 110 0.0083 T 15-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM378_16765 1aafb883928e5461a89c15e45c7364f5 112 SUPERFAMILY SSF47413 43 112 2.53E-13 T 15-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AM378_16765 1aafb883928e5461a89c15e45c7364f5 112 Pfam PF13744 Helix-turn-helix domain 20 112 2.9E-16 T 15-10-2018 IPR039554 HigA2-like, helix-turn-helix domain AM378_16765 1aafb883928e5461a89c15e45c7364f5 112 Gene3D G3DSA:1.10.260.40 25 112 1.8E-19 T 15-10-2018 AM378_05640 14720b533f23809adc7c2828fb96537b 60 Gene3D G3DSA:2.10.70.10 19 60 2.5E-19 T 15-10-2018 AM378_05640 14720b533f23809adc7c2828fb96537b 60 Pfam PF10636 Hemin uptake protein hemP 25 60 3.9E-17 T 15-10-2018 IPR019600 Hemin uptake protein HemP AM378_08230 b5f3e43f81677b37cf3528bcfa890b5e 490 Gene3D G3DSA:1.20.1720.10 9 214 4.0E-42 T 15-10-2018 AM378_08230 b5f3e43f81677b37cf3528bcfa890b5e 490 Pfam PF07690 Major Facilitator Superfamily 14 404 2.4E-49 T 15-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM378_08230 b5f3e43f81677b37cf3528bcfa890b5e 490 PRINTS PR01036 Tetracycline resistance protein TetB signature 134 158 1.7E-9 T 15-10-2018 AM378_08230 b5f3e43f81677b37cf3528bcfa890b5e 490 PRINTS PR01036 Tetracycline resistance protein TetB signature 298 322 1.7E-9 T 15-10-2018 AM378_08230 b5f3e43f81677b37cf3528bcfa890b5e 490 PRINTS PR01036 Tetracycline resistance protein TetB signature 12 36 1.7E-9 T 15-10-2018 AM378_08230 b5f3e43f81677b37cf3528bcfa890b5e 490 PRINTS PR01036 Tetracycline resistance protein TetB signature 72 94 1.7E-9 T 15-10-2018 AM378_08230 b5f3e43f81677b37cf3528bcfa890b5e 490 PRINTS PR01036 Tetracycline resistance protein TetB signature 395 414 1.7E-9 T 15-10-2018 AM378_08230 b5f3e43f81677b37cf3528bcfa890b5e 490 PRINTS PR01036 Tetracycline resistance protein TetB signature 159 183 1.7E-9 T 15-10-2018 AM378_08230 b5f3e43f81677b37cf3528bcfa890b5e 490 Gene3D G3DSA:1.20.1250.20 267 488 1.7E-20 T 15-10-2018 AM378_08230 b5f3e43f81677b37cf3528bcfa890b5e 490 SUPERFAMILY SSF103473 4 485 3.01E-64 T 15-10-2018 IPR036259 MFS transporter superfamily AM378_22365 f385c9ef5bdce7093d3f4ebfcbaf7557 424 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 66 136 1.8E-19 T 15-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 AM378_22365 f385c9ef5bdce7093d3f4ebfcbaf7557 424 SUPERFAMILY SSF47413 5 59 9.48E-9 T 15-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AM378_22365 f385c9ef5bdce7093d3f4ebfcbaf7557 424 TIGRFAM TIGR01526 nadR_NMN_Atrans: nicotinamide-nucleotide adenylyltransferase 65 395 2.6E-153 T 15-10-2018 IPR006417 Nicotinamide-nucleotide adenylyltransferase GO:0000309|GO:0009435 KEGG: 00760+2.7.7.1+2.7.1.22 AM378_22365 f385c9ef5bdce7093d3f4ebfcbaf7557 424 Gene3D G3DSA:3.40.50.300 231 399 5.3E-57 T 15-10-2018 AM378_22365 f385c9ef5bdce7093d3f4ebfcbaf7557 424 SUPERFAMILY SSF52540 232 405 6.73E-28 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_22365 f385c9ef5bdce7093d3f4ebfcbaf7557 424 SMART SM00530 6 62 2.7E-7 T 15-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM378_22365 f385c9ef5bdce7093d3f4ebfcbaf7557 424 Gene3D G3DSA:3.40.50.620 65 230 1.2E-45 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM378_22365 f385c9ef5bdce7093d3f4ebfcbaf7557 424 Gene3D G3DSA:1.10.260.40 5 64 1.9E-6 T 15-10-2018 AM378_22365 f385c9ef5bdce7093d3f4ebfcbaf7557 424 Pfam PF13521 AAA domain 234 394 8.5E-34 T 15-10-2018 IPR038727 NadR/Ttd14, AAA domain AM378_22365 f385c9ef5bdce7093d3f4ebfcbaf7557 424 Pfam PF01381 Helix-turn-helix 11 59 2.5E-8 T 15-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM378_22365 f385c9ef5bdce7093d3f4ebfcbaf7557 424 PIRSF PIRSF004776 3 415 7.8E-215 T 15-10-2018 IPR016429 Bifunctional transcriptional regulator NadR GO:0045892 KEGG: 00760+2.7.7.1+2.7.1.22 AM378_22365 f385c9ef5bdce7093d3f4ebfcbaf7557 424 SUPERFAMILY SSF52374 65 223 5.9E-21 T 15-10-2018 AM378_02225 59738363d035061eab17b8b65e01597b 219 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 12 111 6.1E-32 T 15-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 AM378_02225 59738363d035061eab17b8b65e01597b 219 SUPERFAMILY SSF161098 13 202 1.96E-44 T 15-10-2018 IPR035906 MetI-like superfamily AM378_02225 59738363d035061eab17b8b65e01597b 219 Gene3D G3DSA:1.10.3720.10 1 217 5.2E-56 T 15-10-2018 IPR035906 MetI-like superfamily AM378_02225 59738363d035061eab17b8b65e01597b 219 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 33 217 1.1E-23 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AM378_20205 f11b6f895b80ed0055e5453b19052b47 359 Gene3D G3DSA:3.20.20.190 25 353 1.3E-134 T 15-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 AM378_20205 f11b6f895b80ed0055e5453b19052b47 359 SUPERFAMILY SSF51695 28 352 1.07E-90 T 15-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 AM378_20205 f11b6f895b80ed0055e5453b19052b47 359 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 32 347 7.4E-74 T 15-10-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 AM378_16620 3605386885fb03fdd66666e0b7e96b2a 271 SMART SM00382 33 229 6.2E-14 T 15-10-2018 IPR003593 AAA+ ATPase domain AM378_16620 3605386885fb03fdd66666e0b7e96b2a 271 Gene3D G3DSA:3.40.50.300 6 250 1.4E-64 T 15-10-2018 AM378_16620 3605386885fb03fdd66666e0b7e96b2a 271 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM378_16620 3605386885fb03fdd66666e0b7e96b2a 271 SUPERFAMILY SSF52540 8 237 2.96E-63 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_16620 3605386885fb03fdd66666e0b7e96b2a 271 Pfam PF00005 ABC transporter 25 172 3.2E-29 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM378_07560 72cb96b31d8cacfe7162a0f00da0b8ac 131 SUPERFAMILY SSF50475 4 120 9.82E-13 T 15-10-2018 AM378_07560 72cb96b31d8cacfe7162a0f00da0b8ac 131 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 5 85 1.9E-10 T 15-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 AM378_07560 72cb96b31d8cacfe7162a0f00da0b8ac 131 Gene3D G3DSA:2.30.110.10 4 131 6.9E-30 T 15-10-2018 IPR012349 FMN-binding split barrel GO:0048037 AM378_06195 1c3d97edb6a3002d55e99232bc52ea42 216 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 36 205 5.0E-20 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AM378_06195 1c3d97edb6a3002d55e99232bc52ea42 216 Gene3D G3DSA:1.10.3720.10 6 209 2.6E-32 T 15-10-2018 IPR035906 MetI-like superfamily AM378_06195 1c3d97edb6a3002d55e99232bc52ea42 216 SUPERFAMILY SSF161098 13 204 1.01E-38 T 15-10-2018 IPR035906 MetI-like superfamily AM378_19845 ef86e05244eb7e25ed4d6cd89a046370 514 SUPERFAMILY SSF55874 396 505 2.58E-13 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AM378_19845 ef86e05244eb7e25ed4d6cd89a046370 514 Pfam PF07730 Histidine kinase 310 374 2.2E-10 T 15-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 AM378_19845 ef86e05244eb7e25ed4d6cd89a046370 514 SMART SM00387 413 508 1.2E-7 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AM378_19845 ef86e05244eb7e25ed4d6cd89a046370 514 Gene3D G3DSA:3.30.565.10 385 507 1.0E-24 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AM378_19845 ef86e05244eb7e25ed4d6cd89a046370 514 Pfam PF05231 MASE1 9 282 3.9E-16 T 15-10-2018 IPR007895 MASE1 AM378_10520 6c130c1120ea51d098445467fe9aa178 174 SUPERFAMILY SSF49401 29 174 2.29E-41 T 15-10-2018 IPR008966 Adhesion domain superfamily AM378_10520 6c130c1120ea51d098445467fe9aa178 174 Gene3D G3DSA:2.60.40.1090 41 174 2.0E-39 T 15-10-2018 IPR036937 Fimbrial-type adhesion domain superfamily GO:0007155|GO:0009289 AM378_10520 6c130c1120ea51d098445467fe9aa178 174 Pfam PF00419 Fimbrial protein 31 174 1.3E-16 T 15-10-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM378_02590 defb8ba04e43102ed9660792915af6e9 372 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 62 76 - T 15-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 AM378_02590 defb8ba04e43102ed9660792915af6e9 372 Pfam PF00107 Zinc-binding dehydrogenase 198 317 3.3E-24 T 15-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AM378_02590 defb8ba04e43102ed9660792915af6e9 372 SUPERFAMILY SSF51735 161 335 4.16E-49 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily AM378_02590 defb8ba04e43102ed9660792915af6e9 372 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 29 155 2.0E-26 T 15-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AM378_02590 defb8ba04e43102ed9660792915af6e9 372 TIGRFAM TIGR02818 adh_III_F_hyde: S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 3 370 7.0E-227 T 15-10-2018 IPR014183 Alcohol dehydrogenase class III GO:0006069|GO:0008270|GO:0051903|GO:0055114 KEGG: 00010+1.1.1.1|KEGG: 00071+1.1.1.1|KEGG: 00260+1.1.1.1|KEGG: 00350+1.1.1.1|KEGG: 00592+1.1.1.1|KEGG: 00625+1.1.1.1|KEGG: 00626+1.1.1.1|KEGG: 00680+1.1.1.284|KEGG: 00830+1.1.1.1|KEGG: 00980+1.1.1.1|KEGG: 00982+1.1.1.1|MetaCyc: PWY-1801|MetaCyc: PWY-3162|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5079|MetaCyc: PWY-5082|MetaCyc: PWY-5480|MetaCyc: PWY-5486|MetaCyc: PWY-5751|MetaCyc: PWY-6313|MetaCyc: PWY-6333|MetaCyc: PWY-6342|MetaCyc: PWY-6587|MetaCyc: PWY-6802|MetaCyc: PWY-6871|MetaCyc: PWY-7013|MetaCyc: PWY-7111|MetaCyc: PWY-7118|MetaCyc: PWY-7396|MetaCyc: PWY-7798|Reactome: R-HSA-71384 AM378_02590 defb8ba04e43102ed9660792915af6e9 372 SUPERFAMILY SSF50129 1 187 5.48E-75 T 15-10-2018 IPR011032 GroES-like superfamily AM378_02590 defb8ba04e43102ed9660792915af6e9 372 Gene3D G3DSA:3.40.50.720 175 313 3.8E-157 T 15-10-2018 AM378_02590 defb8ba04e43102ed9660792915af6e9 372 SMART SM00829 11 368 1.6E-4 T 15-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AM378_02590 defb8ba04e43102ed9660792915af6e9 372 SUPERFAMILY SSF50129 319 370 2.78E-12 T 15-10-2018 IPR011032 GroES-like superfamily AM378_02590 defb8ba04e43102ed9660792915af6e9 372 Gene3D G3DSA:3.90.180.10 7 365 3.8E-157 T 15-10-2018 AM378_00875 0917ed5bf69cf8963c41fa5d73698c0b 148 SUPERFAMILY SSF46785 8 134 2.96E-43 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM378_00875 0917ed5bf69cf8963c41fa5d73698c0b 148 Pfam PF01475 Ferric uptake regulator family 10 130 6.7E-48 T 15-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 AM378_00875 0917ed5bf69cf8963c41fa5d73698c0b 148 Gene3D G3DSA:3.30.1490.190 85 143 1.0E-23 T 15-10-2018 AM378_00875 0917ed5bf69cf8963c41fa5d73698c0b 148 Gene3D G3DSA:1.10.10.10 1 83 1.7E-33 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_02725 1dd9be90ebb250d4368e8abb39d2d93e 144 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 5 139 1.1E-39 T 15-10-2018 IPR023485 Phosphotyrosine protein phosphatase I AM378_02725 1dd9be90ebb250d4368e8abb39d2d93e 144 SMART SM00226 3 141 3.7E-54 T 15-10-2018 IPR023485 Phosphotyrosine protein phosphatase I AM378_02725 1dd9be90ebb250d4368e8abb39d2d93e 144 Gene3D G3DSA:3.40.50.2300 1 144 4.8E-52 T 15-10-2018 AM378_02725 1dd9be90ebb250d4368e8abb39d2d93e 144 SUPERFAMILY SSF52788 2 142 2.22E-41 T 15-10-2018 IPR036196 Phosphotyrosine protein phosphatase I superfamily AM378_02725 1dd9be90ebb250d4368e8abb39d2d93e 144 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 75 90 3.1E-24 T 15-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 AM378_02725 1dd9be90ebb250d4368e8abb39d2d93e 144 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 41 57 3.1E-24 T 15-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 AM378_02725 1dd9be90ebb250d4368e8abb39d2d93e 144 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 5 22 3.1E-24 T 15-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 AM378_02725 1dd9be90ebb250d4368e8abb39d2d93e 144 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 113 128 3.1E-24 T 15-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 AM378_02725 1dd9be90ebb250d4368e8abb39d2d93e 144 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 97 110 3.1E-24 T 15-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 AM378_22835 619b8927a9b9a1d13ad93a981717ef04 400 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 347 371 - T 15-10-2018 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AM378_22835 619b8927a9b9a1d13ad93a981717ef04 400 Hamap MF_00913 Probable peptidoglycan glycosyltransferase FtsW [ftsW]. 31 398 41.883 T 15-10-2018 IPR013437 Probable peptidoglycan glycosyltransferase FtsW GO:0009252|GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AM378_22835 619b8927a9b9a1d13ad93a981717ef04 400 Pfam PF01098 Cell cycle protein 35 390 2.2E-124 T 15-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AM378_22835 619b8927a9b9a1d13ad93a981717ef04 400 TIGRFAM TIGR02614 ftsW: cell division protein FtsW 33 388 1.4E-134 T 15-10-2018 IPR013437 Probable peptidoglycan glycosyltransferase FtsW GO:0009252|GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AM378_09140 02760a657f31194554035e73acab4c89 247 Gene3D G3DSA:3.90.550.10 1 237 4.9E-52 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AM378_09140 02760a657f31194554035e73acab4c89 247 SUPERFAMILY SSF53448 3 222 9.09E-54 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AM378_09140 02760a657f31194554035e73acab4c89 247 Pfam PF00535 Glycosyl transferase family 2 5 152 7.9E-34 T 15-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 AM378_07625 280a649de3db79759928f11dd0f2cbbc 65 Pfam PF13617 YnbE-like lipoprotein 9 63 1.5E-28 T 15-10-2018 IPR025985 YnbE-like lipoprotein AM378_07625 280a649de3db79759928f11dd0f2cbbc 65 ProDom PD052969 LIPOPROTEIN PRECURSOR SIGNAL YNBE MEMBRANE OUTER POSSIBLE SIMILAR ECS2004 SO2063 20 65 3.0E-16 T 15-10-2018 AM378_03210 b8ce9943cecdab03191248b31bd9df95 159 Pfam PF10722 Putative bacterial sensory transduction regulator 9 131 2.2E-15 T 15-10-2018 IPR019660 Putative sensory transduction regulator YbjN AM378_20325 721c03f12ebf0a263a07189f9b2f5883 405 Pfam PF11340 Protein of unknown function (DUF3142) 87 309 1.5E-105 T 15-10-2018 IPR021488 Protein of unknown function DUF3142 AM378_18695 2e62710c295cca01f8ab5902133d7130 105 Hamap MF_00744 Met repressor [metJ]. 1 105 40.23 T 15-10-2018 IPR002084 Methionine repressor MetJ GO:0003700|GO:0006355|GO:0006555 AM378_18695 2e62710c295cca01f8ab5902133d7130 105 SUPERFAMILY SSF47598 2 105 3.11E-57 T 15-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 AM378_18695 2e62710c295cca01f8ab5902133d7130 105 ProDom PD020365 REPRESSOR MET BIOSYNTHESIS TRANSCRIPTION METJ METHIONINE REGULON DNA-BINDING REGULATORY AMINO-ACID 10 101 1.0E-48 T 15-10-2018 IPR002084 Methionine repressor MetJ GO:0003700|GO:0006355|GO:0006555 AM378_18695 2e62710c295cca01f8ab5902133d7130 105 Pfam PF01340 Met Apo-repressor, MetJ 3 99 4.2E-58 T 15-10-2018 IPR002084 Methionine repressor MetJ GO:0003700|GO:0006355|GO:0006555 AM378_18695 2e62710c295cca01f8ab5902133d7130 105 Gene3D G3DSA:1.10.140.10 2 105 4.3E-63 T 15-10-2018 IPR023453 Methionine repressor MetJ domain superfamily AM378_10235 6980364fd206b90e2662e7d64bad5204 66 Pfam PF10781 Dextransucrase DSRB 1 60 3.5E-37 T 15-10-2018 IPR019717 Dextransucrase DSRB AM378_10235 6980364fd206b90e2662e7d64bad5204 66 Hamap MF_01549 Protein DsrB [dsrB]. 1 62 26.891 T 15-10-2018 IPR019717 Dextransucrase DSRB AM378_13110 e04b988e635489fd209b1286458994f2 87 Pfam PF04014 Antidote-toxin recognition MazE, bacterial antitoxin 8 40 2.7E-6 T 15-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 AM378_13110 e04b988e635489fd209b1286458994f2 87 Gene3D G3DSA:2.10.260.10 2 84 1.3E-17 T 15-10-2018 AM378_13110 e04b988e635489fd209b1286458994f2 87 SUPERFAMILY SSF89447 5 52 2.41E-7 T 15-10-2018 IPR037914 SpoVT-AbrB domain superfamily AM378_03275 0f58d7039efe1f41862b2966af62293d 242 PIRSF PIRSF039085 1 242 6.8E-85 T 15-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 AM378_03275 0f58d7039efe1f41862b2966af62293d 242 Gene3D G3DSA:3.40.50.300 1 241 1.5E-70 T 15-10-2018 AM378_03275 0f58d7039efe1f41862b2966af62293d 242 SUPERFAMILY SSF52540 3 236 4.31E-69 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_03275 0f58d7039efe1f41862b2966af62293d 242 Pfam PF00005 ABC transporter 20 170 8.1E-36 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM378_03275 0f58d7039efe1f41862b2966af62293d 242 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM378_03275 0f58d7039efe1f41862b2966af62293d 242 SMART SM00382 27 218 3.8E-13 T 15-10-2018 IPR003593 AAA+ ATPase domain AM378_19645 e9210d1c49de4b83ccd69f601d0287ee 300 PIRSF PIRSF036298 1 300 3.0E-165 T 15-10-2018 IPR014603 Formate dehydrogenase iron-sulphur subunit GO:0015944|GO:0045333|GO:0051539 AM378_19645 e9210d1c49de4b83ccd69f601d0287ee 300 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 133 144 - T 15-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AM378_19645 e9210d1c49de4b83ccd69f601d0287ee 300 Pfam PF13247 4Fe-4S dicluster domain 92 188 3.1E-25 T 15-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AM378_19645 e9210d1c49de4b83ccd69f601d0287ee 300 TIGRFAM TIGR01582 FDH-beta: formate dehydrogenase, beta subunit 7 290 3.4E-144 T 15-10-2018 IPR006470 Formate dehydrogenase iron-sulphur subunit, Proteobacteria GO:0015944|GO:0016021|GO:0045333|GO:0051539 AM378_19645 e9210d1c49de4b83ccd69f601d0287ee 300 Gene3D G3DSA:1.20.5.480 247 295 7.2E-26 T 15-10-2018 IPR038384 Formate dehydrogenase, C-terminal domain superfamily AM378_19645 e9210d1c49de4b83ccd69f601d0287ee 300 SUPERFAMILY SSF54862 28 273 4.19E-73 T 15-10-2018 AM378_19645 e9210d1c49de4b83ccd69f601d0287ee 300 Gene3D G3DSA:3.30.70.20 18 162 4.8E-103 T 15-10-2018 AM378_19645 e9210d1c49de4b83ccd69f601d0287ee 300 Gene3D G3DSA:3.30.70.20 28 227 4.8E-103 T 15-10-2018 AM378_19645 e9210d1c49de4b83ccd69f601d0287ee 300 Pfam PF09163 Formate dehydrogenase N, transmembrane 246 289 8.1E-23 T 15-10-2018 IPR015246 Formate dehydrogenase, transmembrane AM378_14040 ecfeb5448e9d8f519abd3ceb23db891a 399 Pfam PF07690 Major Facilitator Superfamily 18 322 5.3E-31 T 15-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM378_14040 ecfeb5448e9d8f519abd3ceb23db891a 399 SUPERFAMILY SSF103473 9 389 5.23E-54 T 15-10-2018 IPR036259 MFS transporter superfamily AM378_14040 ecfeb5448e9d8f519abd3ceb23db891a 399 Gene3D G3DSA:1.20.1250.20 12 386 2.0E-45 T 15-10-2018 AM378_18870 20055d06ef541366a9c9a97369632adc 317 Pfam PF04748 Divergent polysaccharide deacetylase 28 238 7.7E-76 T 15-10-2018 IPR006837 Divergent polysaccharide deacetylase AM378_18870 20055d06ef541366a9c9a97369632adc 317 Gene3D G3DSA:3.20.20.370 16 246 5.7E-73 T 15-10-2018 AM378_18870 20055d06ef541366a9c9a97369632adc 317 SUPERFAMILY SSF88713 24 238 6.0E-71 T 15-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 AM378_01775 8734857b3522462512b565d33796bea5 223 Gene3D G3DSA:3.40.50.10610 63 223 7.8E-6 T 15-10-2018 AM378_01775 8734857b3522462512b565d33796bea5 223 Pfam PF03783 Curli production assembly/transport component CsgG 43 221 8.5E-33 T 15-10-2018 IPR005534 Curli production assembly/transport component CsgG GO:0030288 AM378_01775 8734857b3522462512b565d33796bea5 223 SUPERFAMILY SSF52964 44 144 1.57E-9 T 15-10-2018 AM378_11315 04bb9b7c1d2f475e5e663cb819c7b4a3 492 ProSitePatterns PS00218 Amino acid permeases signature. 49 80 - T 15-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 AM378_11315 04bb9b7c1d2f475e5e663cb819c7b4a3 492 Pfam PF00324 Amino acid permease 24 477 4.0E-143 T 15-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 AM378_11315 04bb9b7c1d2f475e5e663cb819c7b4a3 492 PIRSF PIRSF006060 1 492 9.0E-81 T 15-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 AM378_11315 04bb9b7c1d2f475e5e663cb819c7b4a3 492 Gene3D G3DSA:1.20.1740.10 16 483 2.8E-64 T 15-10-2018 AM378_11735 0b1dd32ae8844ef2e56dc4c2f822b4c1 291 SUPERFAMILY SSF46785 1 112 6.8E-17 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM378_11735 0b1dd32ae8844ef2e56dc4c2f822b4c1 291 Gene3D G3DSA:3.40.190.290 91 285 3.3E-42 T 15-10-2018 AM378_11735 0b1dd32ae8844ef2e56dc4c2f822b4c1 291 Pfam PF03466 LysR substrate binding domain 88 285 4.5E-42 T 15-10-2018 IPR005119 LysR, substrate-binding AM378_11735 0b1dd32ae8844ef2e56dc4c2f822b4c1 291 Gene3D G3DSA:1.10.10.10 1 86 1.5E-16 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_11735 0b1dd32ae8844ef2e56dc4c2f822b4c1 291 SUPERFAMILY SSF53850 90 288 7.42E-42 T 15-10-2018 AM378_11735 0b1dd32ae8844ef2e56dc4c2f822b4c1 291 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 3.3E-14 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_00950 05411c89113d8ab05f465e2ac88170c2 318 Pfam PF04463 Protein of unknown function (DUF523) 7 149 1.1E-37 T 15-10-2018 IPR007553 Domain of unknown function DUF523 AM378_00950 05411c89113d8ab05f465e2ac88170c2 318 Pfam PF08349 Protein of unknown function (DUF1722) 192 309 4.0E-43 T 15-10-2018 IPR013560 Domain of unknown function DUF1722 AM378_00950 05411c89113d8ab05f465e2ac88170c2 318 PIRSF PIRSF037004 1 318 2.1E-132 T 15-10-2018 IPR017087 Uncharacterised conserved protein UCP037004 AM378_24135 4cf2d8bfc55e69b4b0b9a79e02528a8d 1083 Pfam PF13558 Putative exonuclease SbcCD, C subunit 966 1037 5.4E-15 T 15-10-2018 AM378_24135 4cf2d8bfc55e69b4b0b9a79e02528a8d 1083 Gene3D G3DSA:3.40.50.300 836 1078 1.6E-27 T 15-10-2018 AM378_24135 4cf2d8bfc55e69b4b0b9a79e02528a8d 1083 Pfam PF13476 AAA domain 5 280 1.3E-22 T 15-10-2018 IPR038729 Rad50/SbcC-type AAA domain AM378_24135 4cf2d8bfc55e69b4b0b9a79e02528a8d 1083 TIGRFAM TIGR00618 sbcc: exonuclease SbcC 1 1073 4.2E-197 T 15-10-2018 IPR004592 Nuclease SbcC, gammaproteobacteria type AM378_24135 4cf2d8bfc55e69b4b0b9a79e02528a8d 1083 SUPERFAMILY SSF52540 1 1055 3.58E-28 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_24135 4cf2d8bfc55e69b4b0b9a79e02528a8d 1083 Gene3D G3DSA:3.40.50.300 1 287 2.7E-44 T 15-10-2018 AM378_24135 4cf2d8bfc55e69b4b0b9a79e02528a8d 1083 SUPERFAMILY SSF52540 1 272 7.86E-32 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_12365 195844e6f0cdcbae28a71f38c129acd3 320 Pfam PF02685 Glucokinase 5 314 5.4E-124 T 15-10-2018 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0005536|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 AM378_12365 195844e6f0cdcbae28a71f38c129acd3 320 TIGRFAM TIGR00749 glk: glucokinase 5 309 1.0E-140 T 15-10-2018 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0005536|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 AM378_12365 195844e6f0cdcbae28a71f38c129acd3 320 Gene3D G3DSA:3.30.420.40 5 307 9.6E-118 T 15-10-2018 AM378_12365 195844e6f0cdcbae28a71f38c129acd3 320 Hamap MF_00524 Glucokinase [glk]. 3 315 35.308 T 15-10-2018 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0005536|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 AM378_12365 195844e6f0cdcbae28a71f38c129acd3 320 SUPERFAMILY SSF53067 1 316 7.21E-67 T 15-10-2018 AM378_12365 195844e6f0cdcbae28a71f38c129acd3 320 Gene3D G3DSA:3.40.367.20 99 298 9.6E-118 T 15-10-2018 AM378_16975 bcd77a358c5d082e166e46227c5b71a4 549 Pfam PF00999 Sodium/hydrogen exchanger family 8 421 4.4E-76 T 15-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 AM378_16975 bcd77a358c5d082e166e46227c5b71a4 549 TIGRFAM TIGR00831 a_cpa1: Na+/H+ antiporter 7 546 5.9E-207 T 15-10-2018 IPR004705 Cation/H+ exchanger, CPA1 family, bacteria GO:0006812|GO:0015299|GO:0016021 AM378_11410 793b90643844501f8fdc5c461805085f 324 SMART SM00833 239 322 0.0079 T 15-10-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal AM378_11410 793b90643844501f8fdc5c461805085f 324 Gene3D G3DSA:3.40.50.300 2 193 1.6E-45 T 15-10-2018 AM378_11410 793b90643844501f8fdc5c461805085f 324 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 5 166 1.8E-39 T 15-10-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain AM378_11410 793b90643844501f8fdc5c461805085f 324 SUPERFAMILY SSF52540 6 163 3.4E-25 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_03205 2b410dd1385824c08a361e87913b6b19 300 Gene3D G3DSA:3.30.1490.20 115 181 1.9E-25 T 15-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 AM378_03205 2b410dd1385824c08a361e87913b6b19 300 Hamap MF_01552 Ribosomal protein S6--L-glutamate ligase [rimK]. 1 295 54.229 T 15-10-2018 IPR023533 Ribosomal protein S6--L-glutamate ligase RimK AM378_03205 2b410dd1385824c08a361e87913b6b19 300 SUPERFAMILY SSF56059 98 289 5.02E-48 T 15-10-2018 AM378_03205 2b410dd1385824c08a361e87913b6b19 300 TIGRFAM TIGR00768 rimK_fam: alpha-L-glutamate ligase, RimK family 2 286 1.1E-91 T 15-10-2018 IPR004666 Ribosomal S6 modification enzyme RimK/Lysine biosynthesis enzyme LysX GO:0006464 Reactome: R-HSA-70614 AM378_03205 2b410dd1385824c08a361e87913b6b19 300 Pfam PF08443 RimK-like ATP-grasp domain 97 286 1.6E-72 T 15-10-2018 IPR013651 ATP-grasp fold, RimK-type Reactome: R-HSA-70614 AM378_03205 2b410dd1385824c08a361e87913b6b19 300 Gene3D G3DSA:3.30.470.80 182 300 4.0E-45 T 15-10-2018 AM378_03205 2b410dd1385824c08a361e87913b6b19 300 Gene3D G3DSA:3.40.50.20 1 114 1.6E-38 T 15-10-2018 AM378_03245 43443c1c6425f9c5182af88748946451 94 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 5 82 2.3E-8 T 15-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family AM378_03245 43443c1c6425f9c5182af88748946451 94 SUPERFAMILY SSF143011 1 82 8.11E-21 T 15-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily AM378_03245 43443c1c6425f9c5182af88748946451 94 TIGRFAM TIGR02385 RelE_StbE: addiction module toxin, RelE/StbE family 4 83 8.1E-9 T 15-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family AM378_03245 43443c1c6425f9c5182af88748946451 94 Gene3D G3DSA:3.30.2310.20 1 94 2.0E-26 T 15-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily AM378_21840 974831fcce6023414f9b206b6d5c2836 294 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 66 2.9E-17 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_21840 974831fcce6023414f9b206b6d5c2836 294 Pfam PF03466 LysR substrate binding domain 94 290 7.6E-24 T 15-10-2018 IPR005119 LysR, substrate-binding AM378_21840 974831fcce6023414f9b206b6d5c2836 294 Gene3D G3DSA:3.40.190.10 170 264 1.8E-24 T 15-10-2018 AM378_21840 974831fcce6023414f9b206b6d5c2836 294 SUPERFAMILY SSF53850 95 291 7.84E-25 T 15-10-2018 AM378_21840 974831fcce6023414f9b206b6d5c2836 294 Gene3D G3DSA:3.40.190.10 97 279 1.8E-24 T 15-10-2018 AM378_21840 974831fcce6023414f9b206b6d5c2836 294 Gene3D G3DSA:1.10.10.10 6 96 1.7E-21 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_21840 974831fcce6023414f9b206b6d5c2836 294 SUPERFAMILY SSF46785 4 114 9.08E-22 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM378_21840 974831fcce6023414f9b206b6d5c2836 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 4.9E-6 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_21840 974831fcce6023414f9b206b6d5c2836 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 4.9E-6 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_21840 974831fcce6023414f9b206b6d5c2836 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 4.9E-6 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_14085 e4be711f8325146bf006f4ed3937c83f 229 SMART SM01144 27 219 1.4E-75 T 15-10-2018 IPR005636 DTW AM378_14085 e4be711f8325146bf006f4ed3937c83f 229 Pfam PF03942 DTW domain 30 214 7.9E-43 T 15-10-2018 IPR005636 DTW AM378_24255 28e592370cb6068bf6950cb22ee2c457 164 SUPERFAMILY SSF101307 8 155 1.09E-47 T 15-10-2018 IPR036681 PgpA-like superfamily GO:0006629|GO:0008962 AM378_24255 28e592370cb6068bf6950cb22ee2c457 164 Pfam PF04608 Phosphatidylglycerophosphatase A 15 155 5.6E-52 T 15-10-2018 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 AM378_24255 28e592370cb6068bf6950cb22ee2c457 164 PIRSF PIRSF006162 4 162 3.1E-60 T 15-10-2018 IPR026037 Phosphatidylglycerophosphatase A KEGG: 00564+3.1.3.27|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 AM378_22550 7bf7535ceb356778faaa7e950818e7ab 169 Pfam PF01252 Signal peptidase (SPase) II 16 155 4.3E-37 T 15-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 AM378_22550 7bf7535ceb356778faaa7e950818e7ab 169 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 101 116 5.0E-18 T 15-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 AM378_22550 7bf7535ceb356778faaa7e950818e7ab 169 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 137 153 5.0E-18 T 15-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 AM378_22550 7bf7535ceb356778faaa7e950818e7ab 169 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 53 61 5.0E-18 T 15-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 AM378_22550 7bf7535ceb356778faaa7e950818e7ab 169 TIGRFAM TIGR00077 lspA: signal peptidase II 1 162 2.7E-54 T 15-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 AM378_22550 7bf7535ceb356778faaa7e950818e7ab 169 ProSitePatterns PS00855 Signal peptidases II signature. 104 116 - T 15-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 AM378_22550 7bf7535ceb356778faaa7e950818e7ab 169 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 7 162 17.026 T 15-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 AM378_01705 3e25209b38e1bcc199ed7e972f643b05 211 SUPERFAMILY SSF52540 1 209 9.01E-33 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_01705 3e25209b38e1bcc199ed7e972f643b05 211 Gene3D G3DSA:3.40.50.300 1 211 2.2E-43 T 15-10-2018 AM378_01705 3e25209b38e1bcc199ed7e972f643b05 211 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 3 164 8.7E-10 T 15-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain AM378_01705 3e25209b38e1bcc199ed7e972f643b05 211 PIRSF PIRSF009320 1 211 9.2E-57 T 15-10-2018 AM378_03325 f04351cdff75b87314842f26e7ceb5e3 338 PIRSF PIRSF017617 1 338 1.2E-129 T 15-10-2018 IPR023603 Threonine aldolase AM378_03325 f04351cdff75b87314842f26e7ceb5e3 338 Gene3D G3DSA:3.40.640.10 1 245 2.7E-94 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AM378_03325 f04351cdff75b87314842f26e7ceb5e3 338 Pfam PF01212 Beta-eliminating lyase 4 284 7.4E-95 T 15-10-2018 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase GO:0006520|GO:0016829 Reactome: R-HSA-6783984 AM378_03325 f04351cdff75b87314842f26e7ceb5e3 338 SUPERFAMILY SSF53383 3 336 4.52E-112 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM378_03325 f04351cdff75b87314842f26e7ceb5e3 338 Gene3D G3DSA:3.90.1150.10 246 336 2.1E-27 T 15-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AM378_15425 79df6e113fb32b549f6a8cc4572c45a4 284 Gene3D G3DSA:3.40.50.620 1 179 2.4E-79 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM378_15425 79df6e113fb32b549f6a8cc4572c45a4 284 Pfam PF02569 Pantoate-beta-alanine ligase 3 278 3.9E-100 T 15-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 AM378_15425 79df6e113fb32b549f6a8cc4572c45a4 284 Hamap MF_00158 Pantothenate synthetase [panC]. 2 280 39.621 T 15-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 AM378_15425 79df6e113fb32b549f6a8cc4572c45a4 284 Gene3D G3DSA:3.30.1300.10 180 283 5.5E-31 T 15-10-2018 AM378_15425 79df6e113fb32b549f6a8cc4572c45a4 284 TIGRFAM TIGR00018 panC: pantoate--beta-alanine ligase 1 280 1.3E-111 T 15-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 AM378_15425 79df6e113fb32b549f6a8cc4572c45a4 284 SUPERFAMILY SSF52374 1 281 9.85E-106 T 15-10-2018 AM378_05100 0d690a35c0177ea999972107a1c2a28b 366 Gene3D G3DSA:2.120.10.30 35 328 6.0E-16 T 15-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like AM378_05100 0d690a35c0177ea999972107a1c2a28b 366 Pfam PF08450 SMP-30/Gluconolaconase/LRE-like region 52 266 1.8E-8 T 15-10-2018 IPR013658 SMP-30/Gluconolactonase/LRE-like region AM378_05100 0d690a35c0177ea999972107a1c2a28b 366 SUPERFAMILY SSF63829 38 327 1.24E-27 T 15-10-2018 AM378_07140 8bfebb60e9b45ad857e6dda6e661aeee 376 SUPERFAMILY SSF55909 36 373 7.67E-109 T 15-10-2018 AM378_07140 8bfebb60e9b45ad857e6dda6e661aeee 376 Pfam PF04371 Porphyromonas-type peptidyl-arginine deiminase 40 372 1.3E-97 T 15-10-2018 IPR007466 Peptidyl-arginine deiminase, Porphyromonas-type GO:0004668|GO:0009446 KEGG: 00330+3.5.3.12|MetaCyc: PWY-43 AM378_07140 8bfebb60e9b45ad857e6dda6e661aeee 376 Gene3D G3DSA:3.75.10.10 28 374 5.5E-108 T 15-10-2018 AM378_22460 11ae0cb9dbdd3f8e415456b775d75218 22 Pfam PF08254 Threonine leader peptide 1 22 1.3E-11 T 15-10-2018 IPR011720 Thr operon leader peptide GO:0009088|GO:0031554|GO:0031556 AM378_22460 11ae0cb9dbdd3f8e415456b775d75218 22 Hamap MF_01907 thr operon leader peptide [thrL]. 1 22 11.862 T 15-10-2018 IPR011720 Thr operon leader peptide GO:0009088|GO:0031554|GO:0031556 AM378_22460 11ae0cb9dbdd3f8e415456b775d75218 22 TIGRFAM TIGR02077 thr_lead_pep: thr operon leader peptide 1 22 5.6E-10 T 15-10-2018 IPR011720 Thr operon leader peptide GO:0009088|GO:0031554|GO:0031556 AM378_06330 c91d8c11625170cc31807d2cbd83760d 383 SUPERFAMILY SSF54373 178 278 1.96E-7 T 15-10-2018 AM378_06330 c91d8c11625170cc31807d2cbd83760d 383 Pfam PF01494 FAD binding domain 8 348 5.6E-22 T 15-10-2018 IPR002938 FAD-binding domain GO:0071949 AM378_06330 c91d8c11625170cc31807d2cbd83760d 383 SUPERFAMILY SSF51905 6 376 1.05E-59 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AM378_06330 c91d8c11625170cc31807d2cbd83760d 383 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 152 167 2.3E-20 T 15-10-2018 AM378_06330 c91d8c11625170cc31807d2cbd83760d 383 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 302 318 2.3E-20 T 15-10-2018 AM378_06330 c91d8c11625170cc31807d2cbd83760d 383 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 287 302 2.3E-20 T 15-10-2018 AM378_06330 c91d8c11625170cc31807d2cbd83760d 383 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 337 353 2.3E-20 T 15-10-2018 AM378_06330 c91d8c11625170cc31807d2cbd83760d 383 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 7 29 2.3E-20 T 15-10-2018 AM378_06330 c91d8c11625170cc31807d2cbd83760d 383 Gene3D G3DSA:3.50.50.60 7 383 4.2E-151 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AM378_14045 8df335da0e726711d7ff93385bd6b038 248 Pfam PF03591 AzlC protein 27 167 7.2E-38 T 15-10-2018 IPR011606 Branched-chain amino acid transport, permease AM378_15625 54dc4ff52be0163782e7a0e13162d1d1 307 TIGRFAM TIGR03814 Gln_ase: glutaminase A 10 307 3.5E-130 T 15-10-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 AM378_15625 54dc4ff52be0163782e7a0e13162d1d1 307 Hamap MF_00313 Glutaminase [glsA]. 6 307 47.165 T 15-10-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 AM378_15625 54dc4ff52be0163782e7a0e13162d1d1 307 Pfam PF04960 Glutaminase 24 307 6.1E-113 T 15-10-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 AM378_15625 54dc4ff52be0163782e7a0e13162d1d1 307 SUPERFAMILY SSF56601 8 307 1.47E-114 T 15-10-2018 IPR012338 Beta-lactamase/transpeptidase-like AM378_15625 54dc4ff52be0163782e7a0e13162d1d1 307 Gene3D G3DSA:3.40.710.10 3 307 4.8E-111 T 15-10-2018 AM378_11060 eeeb7ff799f726fd337a7f939b88d83e 121 ProSitePatterns PS01069 Prokaryotic diacylglycerol kinase signature. 71 82 - T 15-10-2018 IPR000829 DAGK family GO:0008654|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 AM378_11060 eeeb7ff799f726fd337a7f939b88d83e 121 Gene3D G3DSA:1.10.3830.10 3 121 2.8E-35 T 15-10-2018 IPR036945 Diacylglycerol kinase (DAGK) superfamily GO:0008610|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 AM378_11060 eeeb7ff799f726fd337a7f939b88d83e 121 Pfam PF01219 Prokaryotic diacylglycerol kinase 18 118 1.1E-30 T 15-10-2018 IPR000829 DAGK family GO:0008654|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 AM378_20345 46d7f446baf007977df77ad1b743799d 427 Pfam PF02653 Branched-chain amino acid transport system / permease component 111 397 4.2E-58 T 15-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 AM378_20345 46d7f446baf007977df77ad1b743799d 427 Pfam PF11862 Domain of unknown function (DUF3382) 4 102 3.5E-26 T 15-10-2018 IPR021807 High-affinity branched-chain amino acid transport system permease, LivHM, N-terminal AM378_06400 6e2c7ff37282ee76dbde2f5a1ee8832b 274 PIRSF PIRSF015853 1 274 1.2E-94 T 15-10-2018 IPR007035 Peptidase M55, D-aminopeptidase AM378_06400 6e2c7ff37282ee76dbde2f5a1ee8832b 274 Gene3D G3DSA:3.30.1360.130 119 260 3.5E-89 T 15-10-2018 AM378_06400 6e2c7ff37282ee76dbde2f5a1ee8832b 274 Pfam PF04951 D-aminopeptidase 2 263 9.9E-93 T 15-10-2018 IPR007035 Peptidase M55, D-aminopeptidase AM378_06400 6e2c7ff37282ee76dbde2f5a1ee8832b 274 SUPERFAMILY SSF63992 2 271 1.12E-84 T 15-10-2018 IPR036177 Peptidase M55, D-aminopeptidase superfamily AM378_06400 6e2c7ff37282ee76dbde2f5a1ee8832b 274 Gene3D G3DSA:3.40.50.10780 2 216 3.5E-89 T 15-10-2018 IPR027476 D-aminopeptidase, N-terminal AM378_03750 6e5aecef79ec6b8763e832035be97837 137 SMART SM00881 10 104 5.3E-27 T 15-10-2018 IPR003781 CoA-binding GO:0048037 AM378_03750 6e5aecef79ec6b8763e832035be97837 137 Pfam PF13380 CoA binding domain 14 130 1.7E-40 T 15-10-2018 IPR003781 CoA-binding GO:0048037 AM378_03750 6e5aecef79ec6b8763e832035be97837 137 SUPERFAMILY SSF51735 2 135 1.18E-45 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily AM378_03750 6e5aecef79ec6b8763e832035be97837 137 Gene3D G3DSA:3.40.50.720 1 137 2.1E-44 T 15-10-2018 AM378_02280 5bb9b5b6e7c7b4e027e9378374e0cc78 456 TIGRFAM TIGR00791 gntP: transporter, gluconate:H+ symporter (GntP) family 6 453 6.3E-108 T 15-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 AM378_02280 5bb9b5b6e7c7b4e027e9378374e0cc78 456 PIRSF PIRSF002746 1 456 3.7E-150 T 15-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 AM378_02280 5bb9b5b6e7c7b4e027e9378374e0cc78 456 Pfam PF02447 GntP family permease 6 453 4.6E-148 T 15-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 AM378_05370 cf25db2b1e1b4f73ad9da9df1143cd20 267 SUPERFAMILY SSF161098 18 255 1.21E-44 T 15-10-2018 IPR035906 MetI-like superfamily AM378_05370 cf25db2b1e1b4f73ad9da9df1143cd20 267 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 80 266 3.7E-16 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AM378_05370 cf25db2b1e1b4f73ad9da9df1143cd20 267 Gene3D G3DSA:1.10.3720.10 9 263 8.3E-43 T 15-10-2018 IPR035906 MetI-like superfamily AM378_10480 d0a108531b61429cc1dce8c574b12bb9 281 Gene3D G3DSA:2.60.40.1090 164 281 3.1E-6 T 15-10-2018 IPR036937 Fimbrial-type adhesion domain superfamily GO:0007155|GO:0009289 AM378_18460 1d9650311cf541d7c944f2d139ed7a14 339 TIGRFAM TIGR00766 TIGR00766: inner membrane protein YhjD 52 326 2.5E-124 T 15-10-2018 IPR005274 Inner membrane protein YhjD AM378_18460 1d9650311cf541d7c944f2d139ed7a14 339 PIRSF PIRSF035875 38 337 4.9E-22 T 15-10-2018 IPR017039 Virulence factor BrkB AM378_18460 1d9650311cf541d7c944f2d139ed7a14 339 Pfam PF03631 Virulence factor BrkB 66 324 8.2E-46 T 15-10-2018 IPR017039 Virulence factor BrkB AM378_05330 7d1b2a84e76aaa2aa7c0c77209f39b5d 415 Pfam PF04403 Paraquat-inducible protein A 250 405 1.5E-46 T 15-10-2018 IPR007498 Intermembrane transport protein PqiA-like AM378_05330 7d1b2a84e76aaa2aa7c0c77209f39b5d 415 Pfam PF04403 Paraquat-inducible protein A 54 204 3.4E-38 T 15-10-2018 IPR007498 Intermembrane transport protein PqiA-like AM378_05330 7d1b2a84e76aaa2aa7c0c77209f39b5d 415 SUPERFAMILY SSF48695 219 255 2.3E-5 T 15-10-2018 IPR036280 Multiheme cytochrome superfamily AM378_05330 7d1b2a84e76aaa2aa7c0c77209f39b5d 415 TIGRFAM TIGR00155 pqiA_fam: integral membrane protein, PqiA family 6 405 2.1E-166 T 15-10-2018 IPR005219 Intermembrane transport protein PqiA-like, Enterobacteria-type AM378_12565 2280e3782d90fcab4a964ee439fb2e6b 71 Pfam PF12843 Putative quorum-sensing-regulated virulence factor 3 68 4.2E-31 T 15-10-2018 IPR024530 Putative quorum-sensing-regulated virulence factor AM378_12565 2280e3782d90fcab4a964ee439fb2e6b 71 ProDom PD056452 UNCHARACTERIZED BACTERIA SIMILAR YPEB CYTOPLASMIC VCA0163 PRODUCT STM2426 GENE YPO2988 14 68 6.0E-24 T 15-10-2018 IPR024530 Putative quorum-sensing-regulated virulence factor AM378_08270 a481effa97b865ccaed43be82ede3367 306 SUPERFAMILY SSF161098 89 291 1.23E-21 T 15-10-2018 IPR035906 MetI-like superfamily AM378_08270 a481effa97b865ccaed43be82ede3367 306 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 112 306 1.6E-38 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AM378_08270 a481effa97b865ccaed43be82ede3367 306 Gene3D G3DSA:1.10.3720.10 85 301 7.0E-22 T 15-10-2018 IPR035906 MetI-like superfamily AM378_07650 f57f178f1cadf77179e56fc83af09c54 142 Pfam PF03724 META domain 30 133 5.3E-18 T 15-10-2018 IPR005184 Domain of unknown function DUF306, Meta/HslJ AM378_07650 f57f178f1cadf77179e56fc83af09c54 142 Gene3D G3DSA:2.40.128.270 34 137 1.0E-31 T 15-10-2018 IPR038670 HslJ-like superfamily AM378_11455 3b4380fe92d8cea481cee5a5142f4f2e 114 Pfam PF13989 YejG-like protein 4 108 1.2E-54 T 15-10-2018 IPR020489 Uncharacterised protein family YejG AM378_11455 3b4380fe92d8cea481cee5a5142f4f2e 114 ProDom PD073777 YEJG CYTOPLASMIC SIMILAR Y2914 YPO1269 STY2456 ECS3073 ESCHERICHIA COLI 1 114 8.0E-47 T 15-10-2018 IPR020489 Uncharacterised protein family YejG AM378_08415 dc441232ddf6960a1c89eed66ee7d14b 210 Pfam PF00857 Isochorismatase family 4 204 1.8E-34 T 15-10-2018 IPR000868 Isochorismatase-like GO:0003824 AM378_08415 dc441232ddf6960a1c89eed66ee7d14b 210 Gene3D G3DSA:3.40.50.850 1 209 1.7E-64 T 15-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 AM378_08415 dc441232ddf6960a1c89eed66ee7d14b 210 SUPERFAMILY SSF52499 2 209 1.05E-55 T 15-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 AM378_04375 5ec1c1b74ff12d491e4cac6dc1c7004a 335 TIGRFAM TIGR00678 holB: DNA polymerase III, delta' subunit 12 201 4.0E-61 T 15-10-2018 IPR004622 DNA polymerase III, delta prime subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM378_04375 5ec1c1b74ff12d491e4cac6dc1c7004a 335 Pfam PF13177 DNA polymerase III, delta subunit 10 164 1.3E-43 T 15-10-2018 AM378_04375 5ec1c1b74ff12d491e4cac6dc1c7004a 335 SUPERFAMILY SSF52540 1 206 3.92E-45 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_04375 5ec1c1b74ff12d491e4cac6dc1c7004a 335 Pfam PF09115 DNA polymerase III, delta subunit, C terminal 207 322 3.3E-46 T 15-10-2018 IPR015199 DNA polymerase III, delta subunit, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM378_04375 5ec1c1b74ff12d491e4cac6dc1c7004a 335 SUPERFAMILY SSF48019 209 324 1.04E-37 T 15-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 AM378_04375 5ec1c1b74ff12d491e4cac6dc1c7004a 335 Gene3D G3DSA:3.40.50.300 1 166 1.3E-49 T 15-10-2018 AM378_04375 5ec1c1b74ff12d491e4cac6dc1c7004a 335 Gene3D G3DSA:1.20.272.10 208 328 7.3E-46 T 15-10-2018 AM378_20935 bd610a58f40daa9c8f69d8bdcab2f56a 43 Pfam PF08085 Entericidin EcnA/B family 22 42 3.5E-10 T 15-10-2018 IPR012556 Entericidin A/B GO:0009636|GO:0016020 AM378_12110 d42ea2bd079a14693fecbbf4e3105028 93 Pfam PF08891 YfcL protein 4 87 3.0E-38 T 15-10-2018 IPR014987 Uncharacterised protein family YfcL AM378_09190 5811e489738a77f6481cbac129b04254 299 Gene3D G3DSA:1.10.10.10 6 108 2.7E-18 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_09190 5811e489738a77f6481cbac129b04254 299 SMART SM00862 19 92 2.5E-13 T 15-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AM378_09190 5811e489738a77f6481cbac129b04254 299 SUPERFAMILY SSF46894 15 92 5.39E-15 T 15-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AM378_09190 5811e489738a77f6481cbac129b04254 299 Pfam PF00486 Transcriptional regulatory protein, C terminal 19 91 1.2E-16 T 15-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AM378_17035 da71f238f34e5f0d2ca9e1d2caa180a7 117 SUPERFAMILY SSF142906 1 115 1.11E-33 T 15-10-2018 IPR038056 YjbR-like superfamily AM378_17035 da71f238f34e5f0d2ca9e1d2caa180a7 117 Gene3D G3DSA:3.90.1150.30 1 117 2.4E-36 T 15-10-2018 IPR038056 YjbR-like superfamily AM378_17035 da71f238f34e5f0d2ca9e1d2caa180a7 117 Pfam PF04237 YjbR 12 102 1.1E-17 T 15-10-2018 IPR007351 Uncharacterised protein YjbR AM378_17025 b80d235a270ad4d355081e51a6dc1a4e 350 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 62 76 - T 15-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 AM378_17025 b80d235a270ad4d355081e51a6dc1a4e 350 SMART SM00829 9 343 2.4E-5 T 15-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AM378_17025 b80d235a270ad4d355081e51a6dc1a4e 350 SUPERFAMILY SSF50129 6 173 8.07E-50 T 15-10-2018 IPR011032 GroES-like superfamily AM378_17025 b80d235a270ad4d355081e51a6dc1a4e 350 Gene3D G3DSA:3.90.180.10 8 342 4.2E-136 T 15-10-2018 AM378_17025 b80d235a270ad4d355081e51a6dc1a4e 350 Gene3D G3DSA:3.40.50.720 167 322 4.2E-136 T 15-10-2018 AM378_17025 b80d235a270ad4d355081e51a6dc1a4e 350 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 179 207 - T 15-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 AM378_17025 b80d235a270ad4d355081e51a6dc1a4e 350 SUPERFAMILY SSF51735 149 313 1.25E-43 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily AM378_17025 b80d235a270ad4d355081e51a6dc1a4e 350 Pfam PF00107 Zinc-binding dehydrogenase 186 307 1.0E-24 T 15-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AM378_17025 b80d235a270ad4d355081e51a6dc1a4e 350 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 29 144 1.1E-25 T 15-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AM378_12510 f5658ee8c94c0983ae35a46e9bd0898c 720 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 77 718 1.3E-117 T 15-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 AM378_12510 f5658ee8c94c0983ae35a46e9bd0898c 720 Gene3D G3DSA:2.170.130.10 52 180 1.4E-34 T 15-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily AM378_12510 f5658ee8c94c0983ae35a46e9bd0898c 720 Pfam PF00593 TonB dependent receptor 255 719 9.4E-58 T 15-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel AM378_12510 f5658ee8c94c0983ae35a46e9bd0898c 720 Gene3D G3DSA:2.40.170.20 181 720 8.8E-128 T 15-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AM378_12510 f5658ee8c94c0983ae35a46e9bd0898c 720 Pfam PF07715 TonB-dependent Receptor Plug Domain 76 170 3.4E-20 T 15-10-2018 IPR012910 TonB-dependent receptor, plug domain AM378_12510 f5658ee8c94c0983ae35a46e9bd0898c 720 SUPERFAMILY SSF56935 60 720 4.58E-123 T 15-10-2018 AM378_06700 55ab868eb31359028683bf57417b055f 133 SUPERFAMILY SSF54593 2 131 3.16E-22 T 15-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AM378_06700 55ab868eb31359028683bf57417b055f 133 Gene3D G3DSA:3.10.180.10 1 130 6.4E-34 T 15-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AM378_06700 55ab868eb31359028683bf57417b055f 133 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 3 125 3.0E-8 T 15-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AM378_03915 238b31c5ab6b0363142d6f1cec6acc6b 100 Gene3D G3DSA:3.30.70.100 2 96 5.8E-34 T 15-10-2018 AM378_03915 238b31c5ab6b0363142d6f1cec6acc6b 100 SUPERFAMILY SSF54909 1 91 2.95E-28 T 15-10-2018 IPR011008 Dimeric alpha-beta barrel AM378_03915 238b31c5ab6b0363142d6f1cec6acc6b 100 Pfam PF03992 Antibiotic biosynthesis monooxygenase 1 74 1.8E-14 T 15-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain AM378_15735 58cb37454e65ca99fd1ab3c3ce1ce4ad 294 Pfam PF14305 TupA-like ATPgrasp 44 288 6.4E-44 T 15-10-2018 IPR029465 TupA-like ATPgrasp protein AM378_03140 5bef17b15661a457958dff55eb626152 247 Gene3D G3DSA:1.25.40.20 30 151 3.5E-6 T 15-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily AM378_03140 5bef17b15661a457958dff55eb626152 247 SUPERFAMILY SSF48403 63 218 3.55E-16 T 15-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily AM378_03140 5bef17b15661a457958dff55eb626152 247 Gene3D G3DSA:1.25.40.20 152 232 4.8E-10 T 15-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily AM378_04845 334c8061067fd08ca64aba56f5e88a41 269 Pfam PF13371 Tetratricopeptide repeat 187 258 1.3E-22 T 15-10-2018 AM378_04845 334c8061067fd08ca64aba56f5e88a41 269 Pfam PF13369 Transglutaminase-like superfamily 33 184 3.5E-41 T 15-10-2018 IPR032698 Protein SirB1, N-terminal Reactome: R-HSA-8951664|Reactome: R-HSA-983168 AM378_11270 f07577db4c8782b2a045961a30d551ff 472 SUPERFAMILY SSF55931 134 469 6.15E-101 T 15-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 AM378_11270 f07577db4c8782b2a045961a30d551ff 472 SUPERFAMILY SSF54368 26 132 7.59E-9 T 15-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AM378_11270 f07577db4c8782b2a045961a30d551ff 472 Pfam PF00120 Glutamine synthetase, catalytic domain 134 467 3.4E-103 T 15-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AM378_11270 f07577db4c8782b2a045961a30d551ff 472 Gene3D G3DSA:3.30.590.10 136 471 1.4E-96 T 15-10-2018 AM378_11270 f07577db4c8782b2a045961a30d551ff 472 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 271 286 - T 15-10-2018 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 AM378_11270 f07577db4c8782b2a045961a30d551ff 472 SMART SM01230 133 390 4.9E-98 T 15-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AM378_01015 2d87ebcab9b4fec3b3a017298c8f9bc4 115 TIGRFAM TIGR02968 succ_dehyd_anc: succinate dehydrogenase, hydrophobic membrane anchor protein 10 113 3.1E-36 T 15-10-2018 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 AM378_01015 2d87ebcab9b4fec3b3a017298c8f9bc4 115 PIRSF PIRSF000169 1 115 4.5E-42 T 15-10-2018 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 AM378_01015 2d87ebcab9b4fec3b3a017298c8f9bc4 115 SUPERFAMILY SSF81343 3 114 1.09E-29 T 15-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AM378_01015 2d87ebcab9b4fec3b3a017298c8f9bc4 115 Gene3D G3DSA:1.20.1300.10 1 115 2.6E-31 T 15-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AM378_18715 7965f00e9eaa620390b37ea1a2511712 311 TIGRFAM TIGR02223 ftsN: cell division protein FtsN 2 305 2.2E-77 T 15-10-2018 IPR011930 Cell division protein FtsN GO:0005515 AM378_18715 7965f00e9eaa620390b37ea1a2511712 311 SUPERFAMILY SSF110997 236 306 7.32E-21 T 15-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 AM378_18715 7965f00e9eaa620390b37ea1a2511712 311 Hamap MF_02039 Cell division protein FtsN [ftsN]. 34 311 35.782 T 15-10-2018 IPR011930 Cell division protein FtsN GO:0005515 AM378_18715 7965f00e9eaa620390b37ea1a2511712 311 Pfam PF05036 Sporulation related domain 237 304 1.6E-18 T 15-10-2018 IPR007730 Sporulation-like domain GO:0042834 AM378_18715 7965f00e9eaa620390b37ea1a2511712 311 Gene3D G3DSA:3.30.70.1070 231 311 9.7E-31 T 15-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 AM378_07755 7fe6bf2ce40e5b977babed82f214b30c 221 TIGRFAM TIGR02977 phageshock_pspA: phage shock protein A 1 218 4.7E-95 T 15-10-2018 IPR014319 Phage shock protein, PspA AM378_07755 7fe6bf2ce40e5b977babed82f214b30c 221 Pfam PF04012 PspA/IM30 family 2 216 8.0E-49 T 15-10-2018 IPR007157 PspA/IM30 AM378_13870 d78ef93cada8745f1e5cb503e0aecb61 171 Gene3D G3DSA:3.10.20.10 4 164 3.9E-55 T 15-10-2018 AM378_13870 d78ef93cada8745f1e5cb503e0aecb61 171 Gene3D G3DSA:3.50.100.10 57 157 3.9E-55 T 15-10-2018 AM378_13870 d78ef93cada8745f1e5cb503e0aecb61 171 Pfam PF07566 Domain of Unknown Function (DUF1543) 16 67 2.8E-19 T 15-10-2018 IPR011440 Domain of unknown function DUF1543 AM378_13870 d78ef93cada8745f1e5cb503e0aecb61 171 Pfam PF07566 Domain of Unknown Function (DUF1543) 91 146 1.7E-14 T 15-10-2018 IPR011440 Domain of unknown function DUF1543 AM378_04705 dde2bc7eb70746b78a80f5bf7cb87c7e 150 SUPERFAMILY SSF51197 3 143 1.18E-20 T 15-10-2018 AM378_04705 dde2bc7eb70746b78a80f5bf7cb87c7e 150 Gene3D G3DSA:2.60.120.370 1 143 1.4E-15 T 15-10-2018 IPR037012 YhcH/YjgK/YiaL superfamily AM378_04705 dde2bc7eb70746b78a80f5bf7cb87c7e 150 Pfam PF04074 Domain of unknown function (DUF386) 3 140 3.1E-23 T 15-10-2018 IPR004375 YhcH/YjgK/YiaL family AM378_01825 e670907dff354a1110b179e04494b0c6 147 Gene3D G3DSA:3.40.630.30 1 146 6.8E-38 T 15-10-2018 AM378_01825 e670907dff354a1110b179e04494b0c6 147 Pfam PF13673 Acetyltransferase (GNAT) domain 23 127 1.7E-15 T 15-10-2018 IPR000182 GNAT domain AM378_01825 e670907dff354a1110b179e04494b0c6 147 SUPERFAMILY SSF55729 1 144 8.92E-28 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase AM378_21315 5671cc0a6d9cad2ca13ffeded7ade878 278 Pfam PF00809 Pterin binding enzyme 18 257 1.8E-87 T 15-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AM378_21315 5671cc0a6d9cad2ca13ffeded7ade878 278 ProSitePatterns PS00792 Dihydropteroate synthase signature 1. 17 32 - T 15-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AM378_21315 5671cc0a6d9cad2ca13ffeded7ade878 278 Gene3D G3DSA:3.20.20.20 1 277 1.1E-112 T 15-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AM378_21315 5671cc0a6d9cad2ca13ffeded7ade878 278 ProSitePatterns PS00793 Dihydropteroate synthase signature 2. 51 64 - T 15-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AM378_21315 5671cc0a6d9cad2ca13ffeded7ade878 278 SUPERFAMILY SSF51717 7 274 8.63E-106 T 15-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AM378_21315 5671cc0a6d9cad2ca13ffeded7ade878 278 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 16 271 4.6E-102 T 15-10-2018 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614 AM378_22625 833b44a2b67eaa4bc38e776cbe8a30ab 160 ProSitePatterns PS00075 Dihydrofolate reductase (DHFR) domain signature. 14 36 - T 15-10-2018 IPR017925 Dihydrofolate reductase conserved site GO:0004146|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-1474151|Reactome: R-HSA-196757|Reactome: R-HSA-539107 AM378_22625 833b44a2b67eaa4bc38e776cbe8a30ab 160 SUPERFAMILY SSF53597 1 160 2.88E-57 T 15-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 AM378_22625 833b44a2b67eaa4bc38e776cbe8a30ab 160 PIRSF PIRSF000194 1 160 2.5E-59 T 15-10-2018 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0046654|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614 AM378_22625 833b44a2b67eaa4bc38e776cbe8a30ab 160 Pfam PF00186 Dihydrofolate reductase 3 159 1.7E-59 T 15-10-2018 IPR001796 Dihydrofolate reductase domain GO:0004146|GO:0046654|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 AM378_22625 833b44a2b67eaa4bc38e776cbe8a30ab 160 Gene3D G3DSA:3.40.430.10 1 160 1.4E-58 T 15-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 AM378_22625 833b44a2b67eaa4bc38e776cbe8a30ab 160 PRINTS PR00070 Dihydrofolate reductase signature 41 52 1.1E-14 T 15-10-2018 AM378_22625 833b44a2b67eaa4bc38e776cbe8a30ab 160 PRINTS PR00070 Dihydrofolate reductase signature 14 24 1.1E-14 T 15-10-2018 AM378_22625 833b44a2b67eaa4bc38e776cbe8a30ab 160 PRINTS PR00070 Dihydrofolate reductase signature 28 36 1.1E-14 T 15-10-2018 AM378_22625 833b44a2b67eaa4bc38e776cbe8a30ab 160 PRINTS PR00070 Dihydrofolate reductase signature 91 105 1.1E-14 T 15-10-2018 AM378_00095 6511639c484d3efc81b53c470fbabb86 161 Gene3D G3DSA:1.10.10.10 6 114 2.2E-6 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_00095 6511639c484d3efc81b53c470fbabb86 161 SUPERFAMILY SSF46894 32 107 9.35E-6 T 15-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AM378_12370 03f402e42c451bdb6c11d2cf28b4d399 415 SUPERFAMILY SSF81340 11 398 4.05E-42 T 15-10-2018 IPR014743 Chloride channel, core Reactome: R-HSA-2672351 AM378_12370 03f402e42c451bdb6c11d2cf28b4d399 415 Pfam PF00654 Voltage gated chloride channel 67 392 8.4E-24 T 15-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 AM378_12370 03f402e42c451bdb6c11d2cf28b4d399 415 Gene3D G3DSA:1.10.3080.10 8 408 1.5E-23 T 15-10-2018 IPR014743 Chloride channel, core Reactome: R-HSA-2672351 AM378_12370 03f402e42c451bdb6c11d2cf28b4d399 415 PRINTS PR00762 Chloride channel signature 153 172 1.9E-6 T 15-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 AM378_12370 03f402e42c451bdb6c11d2cf28b4d399 415 PRINTS PR00762 Chloride channel signature 320 340 1.9E-6 T 15-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 AM378_12370 03f402e42c451bdb6c11d2cf28b4d399 415 PRINTS PR00762 Chloride channel signature 103 122 1.9E-6 T 15-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 AM378_12370 03f402e42c451bdb6c11d2cf28b4d399 415 Hamap MF_01115 Putative ion-transport protein YfeO [yfeO]. 9 410 38.086 T 15-10-2018 IPR022969 Chloride channel YfeO AM378_13045 9579ba3c106d98ccc9e02dd8aa800b8a 117 Pfam PF02316 Mu DNA-binding domain 11 59 6.6E-12 T 15-10-2018 IPR003314 Mu-type HTH domain GO:0003677 AM378_13045 9579ba3c106d98ccc9e02dd8aa800b8a 117 Gene3D G3DSA:1.10.10.10 2 68 1.9E-23 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_13045 9579ba3c106d98ccc9e02dd8aa800b8a 117 SUPERFAMILY SSF46955 3 61 8.24E-20 T 15-10-2018 IPR009061 Putative DNA-binding domain superfamily AM378_22950 31ee3bde835e1650b157da537f7dfe1c 479 Gene3D G3DSA:1.10.3080.10 31 473 3.7E-152 T 15-10-2018 IPR014743 Chloride channel, core Reactome: R-HSA-2672351 AM378_22950 31ee3bde835e1650b157da537f7dfe1c 479 SUPERFAMILY SSF81340 23 453 5.62E-110 T 15-10-2018 IPR014743 Chloride channel, core Reactome: R-HSA-2672351 AM378_22950 31ee3bde835e1650b157da537f7dfe1c 479 Hamap MF_01128 H(+)/Cl(-) exchange transporter ClcA [clcA]. 3 469 48.629 T 15-10-2018 IPR023861 Chloride channel, ClcA GO:0005887|GO:0006821|GO:0015108 AM378_22950 31ee3bde835e1650b157da537f7dfe1c 479 PRINTS PR00762 Chloride channel signature 183 202 7.0E-29 T 15-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 AM378_22950 31ee3bde835e1650b157da537f7dfe1c 479 PRINTS PR00762 Chloride channel signature 405 424 7.0E-29 T 15-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 AM378_22950 31ee3bde835e1650b157da537f7dfe1c 479 PRINTS PR00762 Chloride channel signature 387 403 7.0E-29 T 15-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 AM378_22950 31ee3bde835e1650b157da537f7dfe1c 479 PRINTS PR00762 Chloride channel signature 102 119 7.0E-29 T 15-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 AM378_22950 31ee3bde835e1650b157da537f7dfe1c 479 PRINTS PR00762 Chloride channel signature 352 372 7.0E-29 T 15-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 AM378_22950 31ee3bde835e1650b157da537f7dfe1c 479 Pfam PF00654 Voltage gated chloride channel 90 437 1.3E-89 T 15-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 AM378_17655 2c51a29fe190b6b3da052d6b91bd8586 255 Gene3D G3DSA:3.40.50.300 1 240 1.8E-65 T 15-10-2018 AM378_17655 2c51a29fe190b6b3da052d6b91bd8586 255 SUPERFAMILY SSF52540 1 213 1.23E-67 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_17655 2c51a29fe190b6b3da052d6b91bd8586 255 SMART SM00382 26 215 1.6E-19 T 15-10-2018 IPR003593 AAA+ ATPase domain AM378_17655 2c51a29fe190b6b3da052d6b91bd8586 255 ProSitePatterns PS00211 ABC transporters family signature. 129 143 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM378_17655 2c51a29fe190b6b3da052d6b91bd8586 255 Pfam PF00005 ABC transporter 17 156 1.6E-32 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM378_02710 00f18547dcd2f6695f2664d2bb672052 298 Pfam PF00483 Nucleotidyl transferase 6 273 1.2E-25 T 15-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 AM378_02710 00f18547dcd2f6695f2664d2bb672052 298 SUPERFAMILY SSF53448 2 277 1.28E-60 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AM378_02710 00f18547dcd2f6695f2664d2bb672052 298 TIGRFAM TIGR01099 galU: UTP--glucose-1-phosphate uridylyltransferase 6 273 1.8E-113 T 15-10-2018 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343|MetaCyc: PWY-7817 AM378_02710 00f18547dcd2f6695f2664d2bb672052 298 Gene3D G3DSA:3.90.550.10 2 298 1.8E-86 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AM378_20175 f0d65e606bf3f0dffa971ea8dfeb437c 292 Pfam PF02253 Phospholipase A1 44 288 5.6E-94 T 15-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 AM378_20175 f0d65e606bf3f0dffa971ea8dfeb437c 292 PRINTS PR01486 Bacterial phospholipase A1 protein signature 156 170 3.3E-82 T 15-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 AM378_20175 f0d65e606bf3f0dffa971ea8dfeb437c 292 PRINTS PR01486 Bacterial phospholipase A1 protein signature 206 224 3.3E-82 T 15-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 AM378_20175 f0d65e606bf3f0dffa971ea8dfeb437c 292 PRINTS PR01486 Bacterial phospholipase A1 protein signature 261 281 3.3E-82 T 15-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 AM378_20175 f0d65e606bf3f0dffa971ea8dfeb437c 292 PRINTS PR01486 Bacterial phospholipase A1 protein signature 239 256 3.3E-82 T 15-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 AM378_20175 f0d65e606bf3f0dffa971ea8dfeb437c 292 PRINTS PR01486 Bacterial phospholipase A1 protein signature 126 145 3.3E-82 T 15-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 AM378_20175 f0d65e606bf3f0dffa971ea8dfeb437c 292 PRINTS PR01486 Bacterial phospholipase A1 protein signature 103 119 3.3E-82 T 15-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 AM378_20175 f0d65e606bf3f0dffa971ea8dfeb437c 292 PRINTS PR01486 Bacterial phospholipase A1 protein signature 81 98 3.3E-82 T 15-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 AM378_20175 f0d65e606bf3f0dffa971ea8dfeb437c 292 PRINTS PR01486 Bacterial phospholipase A1 protein signature 171 189 3.3E-82 T 15-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 AM378_20175 f0d65e606bf3f0dffa971ea8dfeb437c 292 Gene3D G3DSA:2.40.230.10 33 292 1.7E-104 T 15-10-2018 IPR036541 Phospholipase A1 superfamily GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 AM378_20175 f0d65e606bf3f0dffa971ea8dfeb437c 292 SUPERFAMILY SSF56931 40 291 1.96E-90 T 15-10-2018 IPR036541 Phospholipase A1 superfamily GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 AM378_15135 820c24cdddf32d5816c78fb21a42f965 218 SMART SM00934 6 208 3.7E-37 T 15-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AM378_15135 820c24cdddf32d5816c78fb21a42f965 218 SUPERFAMILY SSF51366 4 216 3.24E-40 T 15-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 AM378_15135 820c24cdddf32d5816c78fb21a42f965 218 Gene3D G3DSA:3.20.20.70 2 217 1.2E-76 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM378_15135 820c24cdddf32d5816c78fb21a42f965 218 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 5 207 3.0E-30 T 15-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AM378_14495 f0719925ee0abbf297b8249ac1f5f9b7 167 SUPERFAMILY SSF54523 16 158 9.42E-9 T 15-10-2018 AM378_14495 f0719925ee0abbf297b8249ac1f5f9b7 167 Pfam PF07963 Prokaryotic N-terminal methylation motif 12 33 1.9E-6 T 15-10-2018 IPR012902 Prokaryotic N-terminal methylation site AM378_14495 f0719925ee0abbf297b8249ac1f5f9b7 167 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 13 34 1.2E-6 T 15-10-2018 IPR012902 Prokaryotic N-terminal methylation site AM378_24195 ac8ab6f6ad11e02d57c34c60006728dd 193 Hamap MF_01950 Acyl carrier protein phosphodiesterase [acpH]. 1 193 52.818 T 15-10-2018 IPR023491 Acyl carrier protein phosphodiesterase, gammaproteobacteria GO:0006633|GO:0008770 KEGG: 00770+3.1.4.14|MetaCyc: PWY-6012 AM378_24195 ac8ab6f6ad11e02d57c34c60006728dd 193 Pfam PF04336 Acyl carrier protein phosphodiesterase 81 185 7.9E-34 T 15-10-2018 IPR007431 Acyl carrier protein phosphodiesterase GO:0006633|GO:0008770 KEGG: 00770+3.1.4.14|MetaCyc: PWY-6012 AM378_24195 ac8ab6f6ad11e02d57c34c60006728dd 193 PIRSF PIRSF011489 1 193 2.6E-78 T 15-10-2018 IPR007431 Acyl carrier protein phosphodiesterase GO:0006633|GO:0008770 KEGG: 00770+3.1.4.14|MetaCyc: PWY-6012 AM378_10555 3fa3a5722b80bbcddb76717f3e1c9205 210 Pfam PF14090 Helix-turn-helix domain 145 209 2.7E-6 T 15-10-2018 AM378_00140 9837c6d86b2bf20e5d00df7cc4c0efd8 300 SUPERFAMILY SSF158544 192 249 1.2E-9 T 15-10-2018 IPR038072 GspK, central domain superfamily AM378_00140 9837c6d86b2bf20e5d00df7cc4c0efd8 300 Gene3D G3DSA:1.10.40.60 192 257 1.3E-7 T 15-10-2018 IPR038072 GspK, central domain superfamily AM378_00140 9837c6d86b2bf20e5d00df7cc4c0efd8 300 SUPERFAMILY SSF158544 96 188 1.18E-12 T 15-10-2018 IPR038072 GspK, central domain superfamily AM378_00140 9837c6d86b2bf20e5d00df7cc4c0efd8 300 Pfam PF03934 Type II secretion system (T2SS), protein K 30 290 2.5E-39 T 15-10-2018 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 AM378_00140 9837c6d86b2bf20e5d00df7cc4c0efd8 300 PIRSF PIRSF002786 1 298 1.1E-36 T 15-10-2018 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 AM378_15765 e431dbdf211479f48e42272b8beca728 298 Hamap MF_02088 Probable queuosine precursor transporter. 76 286 15.803 T 15-10-2018 IPR003744 Queuosine precursor transporter GO:1990397 AM378_15765 e431dbdf211479f48e42272b8beca728 298 Pfam PF02592 Putative vitamin uptake transporter 116 272 6.7E-38 T 15-10-2018 IPR003744 Queuosine precursor transporter GO:1990397 AM378_15765 e431dbdf211479f48e42272b8beca728 298 TIGRFAM TIGR00697 TIGR00697: conserved hypothetical integral membrane protein 89 279 9.2E-30 T 15-10-2018 IPR003744 Queuosine precursor transporter GO:1990397 AM378_21040 343572156b2f8631c4fbead4bb90ea96 102 Gene3D G3DSA:2.30.30.100 1 72 7.2E-35 T 15-10-2018 AM378_21040 343572156b2f8631c4fbead4bb90ea96 102 SUPERFAMILY SSF50182 7 69 4.04E-24 T 15-10-2018 IPR010920 LSM domain superfamily AM378_21040 343572156b2f8631c4fbead4bb90ea96 102 Pfam PF17209 Hfq protein 7 69 4.9E-31 T 15-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 AM378_21040 343572156b2f8631c4fbead4bb90ea96 102 Hamap MF_00436 RNA-binding protein Hfq [hfq]. 3 64 27.396 T 15-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 AM378_21040 343572156b2f8631c4fbead4bb90ea96 102 TIGRFAM TIGR02383 Hfq: RNA chaperone Hfq 5 64 2.0E-29 T 15-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 AM378_00985 1f8e8657b1d6904ce6539776225def63 243 Pfam PF06149 Protein of unknown function (DUF969) 7 224 1.3E-90 T 15-10-2018 IPR010374 Protein of unknown function DUF969 AM378_19045 792528eb3ff3bb6ca244859f69078e40 231 Hamap MF_02060 tRNA (guanosine(18)-2'-O)-methyltransferase [trmH]. 2 197 36.747 T 15-10-2018 IPR033671 tRNA (guanosine(18)-2'-O)-methyltransferase GO:0008168|GO:0030488 AM378_19045 792528eb3ff3bb6ca244859f69078e40 231 Pfam PF00588 SpoU rRNA Methylase family 20 159 8.8E-35 T 15-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 AM378_19045 792528eb3ff3bb6ca244859f69078e40 231 SUPERFAMILY SSF75217 4 182 2.35E-49 T 15-10-2018 IPR029028 Alpha/beta knot methyltransferases AM378_19045 792528eb3ff3bb6ca244859f69078e40 231 Gene3D G3DSA:3.40.1280.10 1 190 8.5E-62 T 15-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AM378_19045 792528eb3ff3bb6ca244859f69078e40 231 Pfam PF12105 SpoU, rRNA methylase, C-terminal 163 217 7.2E-24 T 15-10-2018 IPR022724 RNA methyltransferase, SpoU/TrmH type, C-terminal GO:0009020 AM378_00860 b61cd163a598076ae36de9d9624e7b50 467 Pfam PF03573 outer membrane porin, OprD family 33 435 3.2E-22 T 15-10-2018 IPR005318 Outer membrane porin, bacterial GO:0016021 AM378_00860 b61cd163a598076ae36de9d9624e7b50 467 Gene3D G3DSA:2.40.160.10 23 442 2.1E-32 T 15-10-2018 IPR023614 Porin domain superfamily AM378_00010 57367e1a243a1ed9e0a37b7437052698 126 SUPERFAMILY SSF47781 53 123 2.22E-25 T 15-10-2018 IPR010994 RuvA domain 2-like AM378_00010 57367e1a243a1ed9e0a37b7437052698 126 Pfam PF12836 Helix-hairpin-helix motif 63 124 2.0E-21 T 15-10-2018 AM378_00010 57367e1a243a1ed9e0a37b7437052698 126 TIGRFAM TIGR00426 TIGR00426: competence protein ComEA helix-hairpin-helix repeat region 61 124 1.4E-27 T 15-10-2018 IPR004509 Competence protein ComEA, helix-hairpin-helix domain AM378_00010 57367e1a243a1ed9e0a37b7437052698 126 SMART SM00278 74 93 220.0 T 15-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 AM378_00010 57367e1a243a1ed9e0a37b7437052698 126 SMART SM00278 104 123 1.6 T 15-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 AM378_00010 57367e1a243a1ed9e0a37b7437052698 126 Gene3D G3DSA:1.10.150.280 53 125 1.8E-21 T 15-10-2018 AM378_11895 5e7d938c0dceb1f50ed475a52a3a1e57 183 SUPERFAMILY SSF56300 1 171 5.62E-39 T 15-10-2018 AM378_11895 5e7d938c0dceb1f50ed475a52a3a1e57 183 ProSitePatterns PS01269 Uncharacterized protein family UPF0025 signature. 120 144 - T 15-10-2018 IPR020935 Phosphodiesterase YfcE, conserved site AM378_11895 5e7d938c0dceb1f50ed475a52a3a1e57 183 TIGRFAM TIGR00040 yfcE: phosphodiesterase, MJ0936 family 1 166 1.1E-41 T 15-10-2018 IPR000979 Phosphodiesterase MJ0936/Vps29 Reactome: R-HSA-3238698 AM378_11895 5e7d938c0dceb1f50ed475a52a3a1e57 183 Gene3D G3DSA:3.60.21.10 1 183 1.2E-72 T 15-10-2018 IPR029052 Metallo-dependent phosphatase-like AM378_11895 5e7d938c0dceb1f50ed475a52a3a1e57 183 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 1 161 5.5E-25 T 15-10-2018 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type Reactome: R-HSA-3238698 AM378_10430 d919cf7ffbec25c9c802c42ea53192ac 123 Gene3D G3DSA:3.10.180.10 1 123 1.3E-29 T 15-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AM378_10430 d919cf7ffbec25c9c802c42ea53192ac 123 SUPERFAMILY SSF54593 11 120 3.09E-21 T 15-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AM378_03060 189bcf590cdd33bd0d8605c085966dbc 455 TIGRFAM TIGR00720 sda_mono: L-serine ammonia-lyase 2 451 4.0E-220 T 15-10-2018 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 AM378_03060 189bcf590cdd33bd0d8605c085966dbc 455 Pfam PF03313 Serine dehydratase alpha chain 184 448 2.4E-94 T 15-10-2018 IPR005130 Serine dehydratase-like, alpha subunit AM378_03060 189bcf590cdd33bd0d8605c085966dbc 455 SUPERFAMILY SSF143548 16 158 8.11E-45 T 15-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 AM378_03060 189bcf590cdd33bd0d8605c085966dbc 455 Pfam PF03315 Serine dehydratase beta chain 3 155 1.1E-55 T 15-10-2018 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 AM378_03060 189bcf590cdd33bd0d8605c085966dbc 455 Gene3D G3DSA:3.30.1330.90 10 159 6.4E-51 T 15-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 AM378_03530 77286b71f45613ea493d6b6ed163fd9a 60 Gene3D G3DSA:2.20.25.10 8 60 1.2E-23 T 15-10-2018 AM378_03530 77286b71f45613ea493d6b6ed163fd9a 60 Hamap MF_01187 UPF0434 protein YcaR [ycaR]. 1 54 27.502 T 15-10-2018 IPR038053 Uncharacterised protein family UPF0434 AM378_03530 77286b71f45613ea493d6b6ed163fd9a 60 SUPERFAMILY SSF158997 1 54 1.96E-20 T 15-10-2018 AM378_03530 77286b71f45613ea493d6b6ed163fd9a 60 Pfam PF03966 Trm112p-like protein 2 41 4.3E-10 T 15-10-2018 IPR005651 Trm112-like AM378_17180 679e943e29411c825a65d787bcf56a10 135 Hamap MF_01048 Protein PsiE [psiE]. 1 135 25.332 T 15-10-2018 IPR009315 Phosphate-starvation-induced PsiE GO:0016021|GO:0016036 AM378_17180 679e943e29411c825a65d787bcf56a10 135 PIRSF PIRSF029598 1 135 1.0E-46 T 15-10-2018 IPR009315 Phosphate-starvation-induced PsiE GO:0016021|GO:0016036 AM378_17180 679e943e29411c825a65d787bcf56a10 135 Pfam PF06146 Phosphate-starvation-inducible E 60 122 2.2E-16 T 15-10-2018 IPR020948 Phosphate-starvation-induced PsiE-like AM378_18435 6c17c52801bdaad4af0e39675f62e125 212 Pfam PF00440 Bacterial regulatory proteins, tetR family 25 69 1.4E-5 T 15-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM378_18435 6c17c52801bdaad4af0e39675f62e125 212 Gene3D G3DSA:1.10.357.10 11 170 5.8E-14 T 15-10-2018 AM378_18435 6c17c52801bdaad4af0e39675f62e125 212 SUPERFAMILY SSF46689 18 80 1.2E-8 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AM378_08425 f91af00602d7de81f0403285e4f0395b 90 Pfam PF07023 Protein of unknown function (DUF1315) 5 79 2.9E-26 T 15-10-2018 IPR009749 Protein of unknown function DUF1315 AM378_21395 c43ec14bf83787cec4d308bcc809c608 404 Pfam PF04143 Sulphur transport 4 160 2.1E-24 T 15-10-2018 IPR007272 Sulphur transport domain AM378_21395 c43ec14bf83787cec4d308bcc809c608 404 Pfam PF04143 Sulphur transport 237 393 5.4E-25 T 15-10-2018 IPR007272 Sulphur transport domain AM378_11205 a700caf0a439aed114438bccda38f485 317 Gene3D G3DSA:1.10.10.10 1 89 8.8E-23 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_11205 a700caf0a439aed114438bccda38f485 317 Pfam PF03466 LysR substrate binding domain 96 295 2.7E-27 T 15-10-2018 IPR005119 LysR, substrate-binding AM378_11205 a700caf0a439aed114438bccda38f485 317 SUPERFAMILY SSF53850 96 299 5.25E-30 T 15-10-2018 AM378_11205 a700caf0a439aed114438bccda38f485 317 Gene3D G3DSA:3.40.190.10 98 285 1.6E-47 T 15-10-2018 AM378_11205 a700caf0a439aed114438bccda38f485 317 SUPERFAMILY SSF46785 1 109 8.83E-22 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM378_11205 a700caf0a439aed114438bccda38f485 317 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 2.2E-16 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_11205 a700caf0a439aed114438bccda38f485 317 Gene3D G3DSA:3.40.190.10 165 267 1.6E-47 T 15-10-2018 AM378_07215 96069a4ae5c0508773e93349b1dd4dfd 157 PIRSF PIRSF021700 1 157 1.2E-58 T 15-10-2018 IPR009725 Predicted 3-demethylubiquinone-9 3-methyltransferase AM378_07215 96069a4ae5c0508773e93349b1dd4dfd 157 Pfam PF06983 3-demethylubiquinone-9 3-methyltransferase 3 117 1.4E-35 T 15-10-2018 IPR028973 PhnB-like AM378_07215 96069a4ae5c0508773e93349b1dd4dfd 157 Gene3D G3DSA:3.10.180.70 1 157 4.1E-55 T 15-10-2018 AM378_07215 96069a4ae5c0508773e93349b1dd4dfd 157 SUPERFAMILY SSF54593 3 155 7.88E-43 T 15-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AM378_22555 ff5a150061b543ee1bdb2bd26b4fa1d1 156 SUPERFAMILY SSF54534 7 143 2.36E-35 T 15-10-2018 AM378_22555 ff5a150061b543ee1bdb2bd26b4fa1d1 156 Gene3D G3DSA:3.10.50.40 14 142 8.2E-40 T 15-10-2018 AM378_22555 ff5a150061b543ee1bdb2bd26b4fa1d1 156 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 8 85 2.7E-12 T 15-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain AM378_22555 ff5a150061b543ee1bdb2bd26b4fa1d1 156 Gene3D G3DSA:2.40.10.330 73 129 8.2E-40 T 15-10-2018 AM378_00420 5faa5e582f080af595a0b809a904ebd6 259 Pfam PF01261 Xylose isomerase-like TIM barrel 21 219 9.2E-35 T 15-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain AM378_00420 5faa5e582f080af595a0b809a904ebd6 259 SUPERFAMILY SSF51658 1 258 1.01E-85 T 15-10-2018 IPR036237 Xylose isomerase-like superfamily AM378_00420 5faa5e582f080af595a0b809a904ebd6 259 TIGRFAM TIGR03234 OH-pyruv-isom: hydroxypyruvate isomerase 2 255 2.3E-116 T 15-10-2018 IPR017643 Hydroxypyruvate isomerase KEGG: 00630+5.3.1.22 AM378_00420 5faa5e582f080af595a0b809a904ebd6 259 PIRSF PIRSF006241 1 259 1.8E-97 T 15-10-2018 IPR026040 Hydroxypyruvate isomerase-like AM378_00420 5faa5e582f080af595a0b809a904ebd6 259 Gene3D G3DSA:3.20.20.150 1 259 2.1E-82 T 15-10-2018 AM378_22065 afc75b9b9867e054a7d227727575e17b 395 SUPERFAMILY SSF103473 21 388 4.32E-29 T 15-10-2018 IPR036259 MFS transporter superfamily AM378_22065 afc75b9b9867e054a7d227727575e17b 395 Gene3D G3DSA:1.20.1250.20 21 212 1.4E-9 T 15-10-2018 AM378_22065 afc75b9b9867e054a7d227727575e17b 395 Gene3D G3DSA:1.20.1250.20 213 389 1.4E-10 T 15-10-2018 AM378_17645 832837b7a2d04fd9c557dd4046a641b0 282 Pfam PF02668 Taurine catabolism dioxygenase TauD, TfdA family 7 272 2.0E-66 T 15-10-2018 IPR003819 TauD/TfdA-like domain GO:0016491|GO:0055114 Reactome: R-HSA-71262 AM378_17645 832837b7a2d04fd9c557dd4046a641b0 282 Gene3D G3DSA:3.60.130.10 1 282 4.3E-100 T 15-10-2018 AM378_17645 832837b7a2d04fd9c557dd4046a641b0 282 SUPERFAMILY SSF51197 5 280 5.49E-97 T 15-10-2018 AM378_18545 cc370605a4ad2cea1516f9e19fac407d 410 ProSitePatterns PS00217 Sugar transport proteins signature 2. 107 132 - T 15-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AM378_18545 cc370605a4ad2cea1516f9e19fac407d 410 Gene3D G3DSA:1.20.1250.20 211 398 4.1E-28 T 15-10-2018 AM378_18545 cc370605a4ad2cea1516f9e19fac407d 410 Gene3D G3DSA:1.20.1250.20 10 210 2.6E-42 T 15-10-2018 AM378_18545 cc370605a4ad2cea1516f9e19fac407d 410 SUPERFAMILY SSF103473 5 396 7.19E-73 T 15-10-2018 IPR036259 MFS transporter superfamily AM378_18545 cc370605a4ad2cea1516f9e19fac407d 410 Pfam PF07690 Major Facilitator Superfamily 21 349 2.9E-38 T 15-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM378_16000 1c384c0e6c9f4255ffb3a90e4a6636bd 386 SUPERFAMILY SSF52440 174 279 1.78E-41 T 15-10-2018 IPR016185 Pre-ATP-grasp domain superfamily AM378_16000 1c384c0e6c9f4255ffb3a90e4a6636bd 386 Gene3D G3DSA:3.30.1490.330 263 343 3.7E-29 T 15-10-2018 AM378_16000 1c384c0e6c9f4255ffb3a90e4a6636bd 386 Pfam PF03738 Glutathionylspermidine synthase preATP-grasp 12 384 9.2E-165 T 15-10-2018 IPR005494 Glutathionylspermidine synthase, pre-ATP-grasp-like domain AM378_16000 1c384c0e6c9f4255ffb3a90e4a6636bd 386 SUPERFAMILY SSF56059 1 382 6.29E-95 T 15-10-2018 AM378_00675 9c201dd23d7b17517e4a60b58bd0592b 370 TIGRFAM TIGR02210 rodA_shape: rod shape-determining protein RodA 17 364 1.5E-136 T 15-10-2018 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB GO:0008360|GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AM378_00675 9c201dd23d7b17517e4a60b58bd0592b 370 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 321 345 - T 15-10-2018 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AM378_00675 9c201dd23d7b17517e4a60b58bd0592b 370 Hamap MF_02079 Peptidoglycan glycosyltransferase MrdB [mrdB]. 11 366 29.216 T 15-10-2018 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB GO:0008360|GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AM378_00675 9c201dd23d7b17517e4a60b58bd0592b 370 Pfam PF01098 Cell cycle protein 22 364 8.2E-123 T 15-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AM378_16225 d629da1897f7fa30d2e9105f9575ea03 590 Gene3D G3DSA:3.40.50.300 93 302 5.8E-21 T 15-10-2018 AM378_16225 d629da1897f7fa30d2e9105f9575ea03 590 Gene3D G3DSA:3.30.420.240 407 572 1.3E-8 T 15-10-2018 AM378_16225 d629da1897f7fa30d2e9105f9575ea03 590 Pfam PF17289 Terminase RNaseH-like domain 412 572 1.9E-38 T 15-10-2018 IPR035421 Terminase, large subunit gp17-like AM378_16225 d629da1897f7fa30d2e9105f9575ea03 590 Pfam PF03237 Terminase-like family 163 384 6.1E-57 T 15-10-2018 IPR004921 Terminase large subunit, T4likevirus-type AM378_16225 d629da1897f7fa30d2e9105f9575ea03 590 Pfam PF06056 Putative ATPase subunit of terminase (gpP-like) 12 69 1.8E-23 T 15-10-2018 IPR010332 ATPase terminase subunit, putative GO:0005524|GO:0019069 AM378_06145 019c7b1620c34d9050076fd373d86d17 598 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 11 368 8.8E-92 T 15-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 AM378_06145 019c7b1620c34d9050076fd373d86d17 598 SUPERFAMILY SSF52279 405 598 3.66E-7 T 15-10-2018 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily GO:0004553|GO:0005975 AM378_06145 019c7b1620c34d9050076fd373d86d17 598 Gene3D G3DSA:3.40.50.1700 391 598 8.4E-34 T 15-10-2018 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily GO:0004553|GO:0005975 AM378_06145 019c7b1620c34d9050076fd373d86d17 598 Gene3D G3DSA:3.20.20.300 1 390 1.0E-124 T 15-10-2018 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily GO:0004553|GO:0005975 AM378_06145 019c7b1620c34d9050076fd373d86d17 598 SUPERFAMILY SSF51445 3 383 4.95E-82 T 15-10-2018 IPR017853 Glycoside hydrolase superfamily AM378_06145 019c7b1620c34d9050076fd373d86d17 598 ProSitePatterns PS00775 Glycosyl hydrolases family 3 active site. 280 297 - T 15-10-2018 IPR019800 Glycoside hydrolase, family 3, active site GO:0004553|GO:0005975 AM378_06520 a93937ac597896e0009dc4af88fb5289 117 PRINTS PR01274 Metalloprotease inhibitor signature 11 27 5.9E-5 T 15-10-2018 IPR022815 Protease inhibitor I38 AM378_06520 a93937ac597896e0009dc4af88fb5289 117 PRINTS PR01274 Metalloprotease inhibitor signature 77 90 5.9E-5 T 15-10-2018 IPR022815 Protease inhibitor I38 AM378_06520 a93937ac597896e0009dc4af88fb5289 117 SUPERFAMILY SSF50882 11 113 3.14E-21 T 15-10-2018 IPR016085 Protease inhibitor, beta-barrel domain GO:0004866 AM378_06520 a93937ac597896e0009dc4af88fb5289 117 Pfam PF02974 Protease inhibitor Inh 16 108 1.1E-19 T 15-10-2018 IPR021140 Alkaline proteinase inhibitor/ Outer membrane lipoprotein Omp19 AM378_06520 a93937ac597896e0009dc4af88fb5289 117 Gene3D G3DSA:2.40.128.10 11 114 6.3E-24 T 15-10-2018 AM378_06520 a93937ac597896e0009dc4af88fb5289 117 ProDom PD015804 INHIBITOR PROTEASE METALLOPROTEASE PROTEINASE PRECURSOR SIGNAL PERIPLASMIC METALLOENZYME ALKALINE PRTA-SPECIFIC 19 111 1.0E-10 T 15-10-2018 IPR003086 Metalloprotease inhibitor I38 GO:0004866|GO:0030288 AM378_23295 24b9ce0e3f73cfdd3fafe215a48e6f71 414 Pfam PF01595 Domain of unknown function DUF21 2 169 1.4E-48 T 15-10-2018 IPR002550 CNNM, transmembrane domain AM378_23295 24b9ce0e3f73cfdd3fafe215a48e6f71 414 SUPERFAMILY SSF54631 177 314 2.07E-23 T 15-10-2018 AM378_23295 24b9ce0e3f73cfdd3fafe215a48e6f71 414 Gene3D G3DSA:3.30.465.10 324 404 4.3E-27 T 15-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 AM378_23295 24b9ce0e3f73cfdd3fafe215a48e6f71 414 SMART SM01091 327 405 9.1E-26 T 15-10-2018 IPR005170 Transporter-associated domain AM378_23295 24b9ce0e3f73cfdd3fafe215a48e6f71 414 Gene3D G3DSA:3.10.580.10 186 315 2.1E-44 T 15-10-2018 AM378_23295 24b9ce0e3f73cfdd3fafe215a48e6f71 414 Pfam PF00571 CBS domain 263 311 3.2E-4 T 15-10-2018 IPR000644 CBS domain AM378_23295 24b9ce0e3f73cfdd3fafe215a48e6f71 414 SUPERFAMILY SSF56176 325 407 7.63E-22 T 15-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 AM378_23295 24b9ce0e3f73cfdd3fafe215a48e6f71 414 Pfam PF03471 Transporter associated domain 329 403 2.2E-19 T 15-10-2018 IPR005170 Transporter-associated domain AM378_02275 d1298a12c0ecbc0de8c37a462750c200 176 SUPERFAMILY SSF55729 7 158 6.76E-37 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase AM378_02275 d1298a12c0ecbc0de8c37a462750c200 176 Gene3D G3DSA:3.40.630.30 2 174 8.0E-48 T 15-10-2018 AM378_02275 d1298a12c0ecbc0de8c37a462750c200 176 Pfam PF13302 Acetyltransferase (GNAT) domain 14 156 2.0E-27 T 15-10-2018 IPR000182 GNAT domain AM378_21670 1484f774dfaaa442b4c4ba496bed8b15 364 Pfam PF03739 Predicted permease YjgP/YjgQ family 5 345 1.1E-74 T 15-10-2018 IPR005495 Permease LptG/LptF-related GO:0016021 AM378_21670 1484f774dfaaa442b4c4ba496bed8b15 364 TIGRFAM TIGR04407 LptF_YjgP: LPS export ABC transporter permease LptF 2 348 1.1E-116 T 15-10-2018 IPR030922 LPS export ABC transporter permease LptF GO:0043190|GO:0055085 AM378_01375 d1ad19d63ed41d2cacddf8a303f3bcab 236 Pfam PF01027 Inhibitor of apoptosis-promoting Bax1 20 232 1.8E-60 T 15-10-2018 IPR006214 Bax inhibitor 1-related AM378_04550 afd44bf88c959b16f508885e524f5256 76 Pfam PF06440 DNA polymerase III, theta subunit 3 71 3.2E-40 T 15-10-2018 IPR009052 DNA polymerase III-theta, bacterial GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM378_04550 afd44bf88c959b16f508885e524f5256 76 ProDom PD057609 DNA POLYMERASE THETA SUBUNIT TRANSFERASE III NUCLEOTIDYLTRANSFERASE III DNA-DIRECTED REPLICATION 4 76 2.0E-28 T 15-10-2018 IPR009052 DNA polymerase III-theta, bacterial GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM378_04550 afd44bf88c959b16f508885e524f5256 76 Gene3D G3DSA:1.20.58.250 1 76 3.8E-39 T 15-10-2018 IPR036745 DNA polymerase III-theta superfamily GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM378_04550 afd44bf88c959b16f508885e524f5256 76 SUPERFAMILY SSF46575 2 75 5.1E-36 T 15-10-2018 AM378_12910 e836514b71dd9b38ea9a6e39c82605d1 117 SUPERFAMILY SSF52833 3 117 1.03E-37 T 15-10-2018 IPR036249 Thioredoxin-like superfamily AM378_12910 e836514b71dd9b38ea9a6e39c82605d1 117 Gene3D G3DSA:3.40.30.10 1 117 1.1E-51 T 15-10-2018 AM378_12910 e836514b71dd9b38ea9a6e39c82605d1 117 TIGRFAM TIGR00014 arsC: arsenate reductase (glutaredoxin) 4 117 1.7E-49 T 15-10-2018 IPR006659 Arsenate reductase GO:0008794|GO:0055114 MetaCyc: PWY-4202|MetaCyc: PWY-4621 AM378_12910 e836514b71dd9b38ea9a6e39c82605d1 117 Pfam PF03960 ArsC family 7 116 2.8E-22 T 15-10-2018 IPR006660 Arsenate reductase-like AM378_22135 684a90959ce0c81b557dc2fc7f563954 357 Gene3D G3DSA:3.10.180.10 152 290 4.8E-37 T 15-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AM378_22135 684a90959ce0c81b557dc2fc7f563954 357 SUPERFAMILY SSF54593 11 325 3.53E-44 T 15-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AM378_22135 684a90959ce0c81b557dc2fc7f563954 357 Gene3D G3DSA:4.10.1270.10 291 357 1.1E-35 T 15-10-2018 AM378_22135 684a90959ce0c81b557dc2fc7f563954 357 TIGRFAM TIGR02295 HpaD: 3,4-dihydroxyphenylacetate 2,3-dioxygenase 14 309 4.0E-128 T 15-10-2018 IPR011981 3,4-dihydroxyphenylacetate 2,3-dioxygenase, Mn/Fe-type AM378_22135 684a90959ce0c81b557dc2fc7f563954 357 Gene3D G3DSA:3.10.180.10 5 151 3.6E-57 T 15-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AM378_22135 684a90959ce0c81b557dc2fc7f563954 357 ProSitePatterns PS00082 Extradiol ring-cleavage dioxygenases signature. 246 267 - T 15-10-2018 IPR000486 Extradiol ring-cleavage dioxygenase, class I /II GO:0003824|GO:0006725|GO:0008198|GO:0055114 AM378_22135 684a90959ce0c81b557dc2fc7f563954 357 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 19 106 2.1E-6 T 15-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AM378_22135 684a90959ce0c81b557dc2fc7f563954 357 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 152 268 2.4E-11 T 15-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AM378_09860 0eb7377ecf668a1b9835a32cf8bd05cd 310 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 1.5E-5 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_09860 0eb7377ecf668a1b9835a32cf8bd05cd 310 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 1.5E-5 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_09860 0eb7377ecf668a1b9835a32cf8bd05cd 310 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 1.5E-5 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_09860 0eb7377ecf668a1b9835a32cf8bd05cd 310 Gene3D G3DSA:1.10.10.10 1 86 2.8E-31 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_09860 0eb7377ecf668a1b9835a32cf8bd05cd 310 Pfam PF03466 LysR substrate binding domain 96 301 8.2E-28 T 15-10-2018 IPR005119 LysR, substrate-binding AM378_09860 0eb7377ecf668a1b9835a32cf8bd05cd 310 SUPERFAMILY SSF46785 2 83 2.04E-20 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM378_09860 0eb7377ecf668a1b9835a32cf8bd05cd 310 Gene3D G3DSA:3.40.190.10 90 300 1.7E-58 T 15-10-2018 AM378_09860 0eb7377ecf668a1b9835a32cf8bd05cd 310 Gene3D G3DSA:3.40.190.10 172 275 1.7E-58 T 15-10-2018 AM378_09860 0eb7377ecf668a1b9835a32cf8bd05cd 310 SUPERFAMILY SSF53850 90 302 3.43E-41 T 15-10-2018 AM378_09860 0eb7377ecf668a1b9835a32cf8bd05cd 310 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 66 4.2E-18 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_12575 56c5f8af15400c9f1043855b6612d3c1 338 Pfam PF04354 ZipA, C-terminal FtsZ-binding domain 203 329 3.1E-49 T 15-10-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 AM378_12575 56c5f8af15400c9f1043855b6612d3c1 338 TIGRFAM TIGR02205 septum_zipA: cell division protein ZipA 4 330 3.2E-80 T 15-10-2018 IPR011919 Cell division protein ZipA GO:0016021|GO:0090529 AM378_12575 56c5f8af15400c9f1043855b6612d3c1 338 ProDom PD035754 CELL DIVISION MEMBRANE ZIPA SEPTATION TRANSMEMBRANE HOMOLOG INNER CYCLE ZIPA 203 337 5.0E-70 T 15-10-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 AM378_12575 56c5f8af15400c9f1043855b6612d3c1 338 SUPERFAMILY SSF64383 201 334 3.53E-48 T 15-10-2018 IPR036765 ZipA, C-terminal FtsZ-binding domain superfamily GO:0090529 AM378_12575 56c5f8af15400c9f1043855b6612d3c1 338 SMART SM00771 200 330 8.8E-76 T 15-10-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 AM378_12575 56c5f8af15400c9f1043855b6612d3c1 338 Hamap MF_00509 Cell division protein ZipA [zipA]. 3 332 25.138 T 15-10-2018 IPR011919 Cell division protein ZipA GO:0016021|GO:0090529 AM378_12575 56c5f8af15400c9f1043855b6612d3c1 338 Gene3D G3DSA:3.30.1400.10 198 338 8.1E-55 T 15-10-2018 IPR036765 ZipA, C-terminal FtsZ-binding domain superfamily GO:0090529 AM378_05365 b0fd90920f737835e08d0b5a0b4bf66c 263 Pfam PF09339 IclR helix-turn-helix domain 15 65 6.0E-14 T 15-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 AM378_05365 b0fd90920f737835e08d0b5a0b4bf66c 263 Gene3D G3DSA:1.10.10.10 2 80 3.0E-20 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_05365 b0fd90920f737835e08d0b5a0b4bf66c 263 Gene3D G3DSA:3.30.450.40 85 263 2.9E-65 T 15-10-2018 IPR029016 GAF-like domain superfamily AM378_05365 b0fd90920f737835e08d0b5a0b4bf66c 263 SUPERFAMILY SSF55781 77 258 1.5E-52 T 15-10-2018 AM378_05365 b0fd90920f737835e08d0b5a0b4bf66c 263 SUPERFAMILY SSF46785 13 85 2.77E-15 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM378_05365 b0fd90920f737835e08d0b5a0b4bf66c 263 Pfam PF01614 Bacterial transcriptional regulator 129 254 3.8E-42 T 15-10-2018 IPR014757 Transcription regulator IclR, C-terminal AM378_05365 b0fd90920f737835e08d0b5a0b4bf66c 263 SMART SM00346 13 102 1.1E-34 T 15-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 AM378_08400 f76e8701806ff3179d670e34e185e832 183 Gene3D G3DSA:3.40.109.10 1 183 5.8E-42 T 15-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 AM378_08400 f76e8701806ff3179d670e34e185e832 183 Pfam PF00881 Nitroreductase family 8 161 1.4E-20 T 15-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 AM378_08400 f76e8701806ff3179d670e34e185e832 183 PIRSF PIRSF000232 1 182 7.1E-64 T 15-10-2018 IPR026021 Putative NAD(P)H nitroreductase YdjA-like AM378_08400 f76e8701806ff3179d670e34e185e832 183 SUPERFAMILY SSF55469 1 174 5.89E-38 T 15-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 AM378_21500 fd0cc970972792b36319dcff4413db1f 234 TIGRFAM TIGR02324 CP_lyasePhnL: phosphonate C-P lyase system protein PhnL 5 226 2.3E-107 T 15-10-2018 IPR012701 Phosphonate C-P lyase system, PhnL KEGG: 00440+2.7.8.37|MetaCyc: PWY-7399|MetaCyc: PWY-7805|MetaCyc: PWY-7807 AM378_21500 fd0cc970972792b36319dcff4413db1f 234 SMART SM00382 36 231 1.4E-6 T 15-10-2018 IPR003593 AAA+ ATPase domain AM378_21500 fd0cc970972792b36319dcff4413db1f 234 Pfam PF00005 ABC transporter 27 181 7.7E-28 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM378_21500 fd0cc970972792b36319dcff4413db1f 234 Gene3D G3DSA:3.40.50.300 3 233 1.4E-50 T 15-10-2018 AM378_21500 fd0cc970972792b36319dcff4413db1f 234 SUPERFAMILY SSF52540 4 229 7.91E-48 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_21500 fd0cc970972792b36319dcff4413db1f 234 ProSitePatterns PS00211 ABC transporters family signature. 153 167 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM378_16500 10ecb74ae6eb288b7b7443c9f090693d 243 Gene3D G3DSA:1.10.3810.10 55 235 4.3E-51 T 15-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AM378_16500 10ecb74ae6eb288b7b7443c9f090693d 243 Hamap MF_00766 Biosynthetic peptidoglycan transglycosylase [mtgA]. 12 234 38.559 T 15-10-2018 IPR011812 Biosynthetic peptidoglycan transglycosylase GO:0009252|GO:0009274|GO:0016021|GO:0016763 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AM378_16500 10ecb74ae6eb288b7b7443c9f090693d 243 TIGRFAM TIGR02070 mono_pep_trsgly: monofunctional biosynthetic peptidoglycan transglycosylase 24 232 7.8E-82 T 15-10-2018 IPR011812 Biosynthetic peptidoglycan transglycosylase GO:0009252|GO:0009274|GO:0016021|GO:0016763 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AM378_16500 10ecb74ae6eb288b7b7443c9f090693d 243 Pfam PF00912 Transglycosylase 62 228 3.7E-49 T 15-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AM378_16500 10ecb74ae6eb288b7b7443c9f090693d 243 SUPERFAMILY SSF53955 58 232 8.72E-59 T 15-10-2018 IPR023346 Lysozyme-like domain superfamily AM378_08580 b507f2f7686300f88b31e30d61556348 89 Pfam PF03776 Septum formation topological specificity factor MinE 14 82 7.3E-24 T 15-10-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 AM378_08580 b507f2f7686300f88b31e30d61556348 89 Gene3D G3DSA:3.30.1070.10 31 88 1.8E-27 T 15-10-2018 IPR036707 Cell division topological specificity factor MinE superfamily GO:0032955|GO:0051301 AM378_08580 b507f2f7686300f88b31e30d61556348 89 Hamap MF_00262 Cell division topological specificity factor [minE]. 3 86 18.66 T 15-10-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 AM378_08580 b507f2f7686300f88b31e30d61556348 89 SUPERFAMILY SSF55229 32 84 3.79E-17 T 15-10-2018 IPR036707 Cell division topological specificity factor MinE superfamily GO:0032955|GO:0051301 AM378_08580 b507f2f7686300f88b31e30d61556348 89 TIGRFAM TIGR01215 minE: cell division topological specificity factor MinE 1 83 1.8E-33 T 15-10-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 AM378_09880 9343eed2bb61373e594b516373cc0e03 850 Pfam PF09937 Uncharacterized protein conserved in bacteria (DUF2169) 20 299 3.6E-80 T 15-10-2018 IPR018683 Domain of unknown function DUF2169 AM378_09880 9343eed2bb61373e594b516373cc0e03 850 Gene3D G3DSA:2.160.20.80 515 696 1.3E-33 T 15-10-2018 AM378_09880 9343eed2bb61373e594b516373cc0e03 850 Gene3D G3DSA:2.160.20.80 697 840 1.7E-29 T 15-10-2018 AM378_09880 9343eed2bb61373e594b516373cc0e03 850 Pfam PF13599 Pentapeptide repeats (9 copies) 658 729 9.9E-10 T 15-10-2018 IPR001646 Pentapeptide repeat AM378_09880 9343eed2bb61373e594b516373cc0e03 850 Pfam PF00805 Pentapeptide repeats (8 copies) 557 595 6.5E-10 T 15-10-2018 IPR001646 Pentapeptide repeat AM378_09880 9343eed2bb61373e594b516373cc0e03 850 Pfam PF00805 Pentapeptide repeats (8 copies) 526 556 1.7E-5 T 15-10-2018 IPR001646 Pentapeptide repeat AM378_09880 9343eed2bb61373e594b516373cc0e03 850 Pfam PF00805 Pentapeptide repeats (8 copies) 602 635 0.0027 T 15-10-2018 IPR001646 Pentapeptide repeat AM378_09880 9343eed2bb61373e594b516373cc0e03 850 Pfam PF00805 Pentapeptide repeats (8 copies) 788 823 9.0E-9 T 15-10-2018 IPR001646 Pentapeptide repeat AM378_09880 9343eed2bb61373e594b516373cc0e03 850 SUPERFAMILY SSF141571 689 829 1.83E-28 T 15-10-2018 AM378_09880 9343eed2bb61373e594b516373cc0e03 850 SUPERFAMILY SSF141571 527 634 1.31E-24 T 15-10-2018 AM378_15210 af02a2266c997f977f30e300b8be3333 362 Gene3D G3DSA:3.40.190.10 142 357 5.2E-116 T 15-10-2018 AM378_15210 af02a2266c997f977f30e300b8be3333 362 Pfam PF13531 Bacterial extracellular solute-binding protein 46 302 4.4E-16 T 15-10-2018 AM378_15210 af02a2266c997f977f30e300b8be3333 362 Gene3D G3DSA:3.40.190.10 45 344 5.2E-116 T 15-10-2018 AM378_15210 af02a2266c997f977f30e300b8be3333 362 SUPERFAMILY SSF53850 44 341 1.09E-52 T 15-10-2018 AM378_04045 244328223fae640694a0e00a6980a292 182 TIGRFAM TIGR00560 pgsA: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 4 180 1.6E-61 T 15-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 AM378_04045 244328223fae640694a0e00a6980a292 182 Pfam PF01066 CDP-alcohol phosphatidyltransferase 4 71 2.6E-17 T 15-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 AM378_04045 244328223fae640694a0e00a6980a292 182 PIRSF PIRSF000847 1 180 5.8E-45 T 15-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 AM378_04045 244328223fae640694a0e00a6980a292 182 Hamap MF_01437 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase [pgsA]. 1 182 33.015 T 15-10-2018 IPR023762 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase, bacterial GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 AM378_04045 244328223fae640694a0e00a6980a292 182 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 49 71 - T 15-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 AM378_04045 244328223fae640694a0e00a6980a292 182 Gene3D G3DSA:1.20.120.1760 4 176 3.1E-15 T 15-10-2018 AM378_03480 0a3c8aca89bc8a24ec049c3da215bfe7 229 TIGRFAM TIGR00017 cmk: cytidylate kinase 6 219 8.0E-93 T 15-10-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 AM378_03480 0a3c8aca89bc8a24ec049c3da215bfe7 229 Hamap MF_00238 Cytidylate kinase [cmk]. 6 224 34.246 T 15-10-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 AM378_03480 0a3c8aca89bc8a24ec049c3da215bfe7 229 SUPERFAMILY SSF52540 6 224 2.31E-48 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_03480 0a3c8aca89bc8a24ec049c3da215bfe7 229 Pfam PF02224 Cytidylate kinase 8 221 1.6E-82 T 15-10-2018 IPR011994 Cytidylate kinase domain GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 AM378_03480 0a3c8aca89bc8a24ec049c3da215bfe7 229 Gene3D G3DSA:3.40.50.300 1 229 2.5E-86 T 15-10-2018 AM378_06310 cba94cd6d04decef62d9ff3e2c6cb6a4 436 Pfam PF07690 Major Facilitator Superfamily 31 393 2.9E-40 T 15-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM378_06310 cba94cd6d04decef62d9ff3e2c6cb6a4 436 Gene3D G3DSA:1.20.1250.20 17 433 1.1E-70 T 15-10-2018 AM378_06310 cba94cd6d04decef62d9ff3e2c6cb6a4 436 SUPERFAMILY SSF103473 16 430 3.53E-81 T 15-10-2018 IPR036259 MFS transporter superfamily AM378_15965 f68992d0c2c4bfe5d3e95f9917fb7612 505 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 21 439 1.4E-132 T 15-10-2018 IPR010130 Type I secretion outer membrane protein, TolC GO:0015562|GO:0019867|GO:0055085 AM378_15965 f68992d0c2c4bfe5d3e95f9917fb7612 505 Pfam PF02321 Outer membrane efflux protein 25 209 4.9E-29 T 15-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 AM378_15965 f68992d0c2c4bfe5d3e95f9917fb7612 505 Pfam PF02321 Outer membrane efflux protein 232 427 3.4E-34 T 15-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 AM378_15965 f68992d0c2c4bfe5d3e95f9917fb7612 505 Gene3D G3DSA:1.20.1600.10 23 450 2.3E-152 T 15-10-2018 AM378_15965 f68992d0c2c4bfe5d3e95f9917fb7612 505 SUPERFAMILY SSF56954 25 446 2.88E-96 T 15-10-2018 AM378_15870 f4f6eedeebad2f7e4d730179765d9833 201 Pfam PF01464 Transglycosylase SLT domain 40 164 2.4E-27 T 15-10-2018 IPR008258 Transglycosylase SLT domain 1 AM378_15870 f4f6eedeebad2f7e4d730179765d9833 201 SUPERFAMILY SSF53955 27 158 1.55E-28 T 15-10-2018 IPR023346 Lysozyme-like domain superfamily AM378_15870 f4f6eedeebad2f7e4d730179765d9833 201 Gene3D G3DSA:1.10.530.10 24 201 6.2E-43 T 15-10-2018 AM378_15870 f4f6eedeebad2f7e4d730179765d9833 201 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 58 86 - T 15-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 AM378_16040 53206c35cc2981e007bf4e090bf967c4 206 PIRSF PIRSF006158 1 205 8.3E-72 T 15-10-2018 IPR016476 SH3 domain protein AM378_16040 53206c35cc2981e007bf4e090bf967c4 206 TIGRFAM TIGR04211 SH3_and_anchor: SH3 domain protein 27 204 5.8E-56 T 15-10-2018 IPR016476 SH3 domain protein AM378_16040 53206c35cc2981e007bf4e090bf967c4 206 SMART SM00287 23 89 2.2E-9 T 15-10-2018 IPR003646 SH3-like domain, bacterial-type AM378_16040 53206c35cc2981e007bf4e090bf967c4 206 Gene3D G3DSA:2.30.30.40 20 88 2.8E-7 T 15-10-2018 AM378_16040 53206c35cc2981e007bf4e090bf967c4 206 Pfam PF08239 Bacterial SH3 domain 34 85 6.2E-9 T 15-10-2018 IPR003646 SH3-like domain, bacterial-type AM378_18455 2bf72a6de16ecdc61afadc8d904f0e99 288 Pfam PF00378 Enoyl-CoA hydratase/isomerase 43 212 3.4E-17 T 15-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 AM378_18455 2bf72a6de16ecdc61afadc8d904f0e99 288 Gene3D G3DSA:3.90.226.10 1 226 4.8E-82 T 15-10-2018 AM378_18455 2bf72a6de16ecdc61afadc8d904f0e99 288 SUPERFAMILY SSF52096 25 266 6.43E-33 T 15-10-2018 IPR029045 ClpP/crotonase-like domain superfamily AM378_13300 61f97a6f000cd4b84d3d277462599198 73 ProDom PD060428 YFGJ CYTOPLASMIC VP0614 ECS3372 VC0765 YPO2873 Y1359 STY2763A VV0773 5 68 2.0E-19 T 15-10-2018 IPR010807 Protein of unknown function DUF1407 AM378_13300 61f97a6f000cd4b84d3d277462599198 73 Pfam PF07191 zinc-ribbons 4 68 1.3E-29 T 15-10-2018 IPR010807 Protein of unknown function DUF1407 AM378_13300 61f97a6f000cd4b84d3d277462599198 73 Gene3D G3DSA:2.10.290.10 1 71 4.1E-28 T 15-10-2018 IPR029037 YfgJ-like AM378_13300 61f97a6f000cd4b84d3d277462599198 73 SUPERFAMILY SSF161187 1 70 1.11E-27 T 15-10-2018 AM378_19270 95e1ebad241a93d19f393baae8a70181 127 Pfam PF03899 ATP synthase I chain 13 109 1.2E-18 T 15-10-2018 IPR005598 ATP synthase protein I AM378_11640 cd61f4ea52571edebaefde2fbd1a046d 86 Gene3D G3DSA:3.10.20.30 2 86 2.9E-18 T 15-10-2018 IPR012675 Beta-grasp domain superfamily AM378_11640 cd61f4ea52571edebaefde2fbd1a046d 86 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 39 47 - T 15-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 AM378_11640 cd61f4ea52571edebaefde2fbd1a046d 86 SUPERFAMILY SSF54292 5 85 1.7E-18 T 15-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 AM378_11640 cd61f4ea52571edebaefde2fbd1a046d 86 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 12 78 2.0E-9 T 15-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AM378_14245 63a0a46e00ace82cd002add0482485e7 1162 Pfam PF14579 Helix-hairpin-helix motif 808 899 9.6E-23 T 15-10-2018 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM378_14245 63a0a46e00ace82cd002add0482485e7 1162 SMART SM00481 7 74 2.9E-24 T 15-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal AM378_14245 63a0a46e00ace82cd002add0482485e7 1162 Pfam PF01336 OB-fold nucleic acid binding domain 1002 1073 1.9E-7 T 15-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 AM378_14245 63a0a46e00ace82cd002add0482485e7 1162 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 295 734 8.2E-177 T 15-10-2018 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM378_14245 63a0a46e00ace82cd002add0482485e7 1162 SUPERFAMILY SSF89550 6 263 1.0E-13 T 15-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 AM378_14245 63a0a46e00ace82cd002add0482485e7 1162 Pfam PF02811 PHP domain 8 171 6.0E-42 T 15-10-2018 IPR004013 PHP domain GO:0003824 AM378_14245 63a0a46e00ace82cd002add0482485e7 1162 Gene3D G3DSA:2.40.50.140 984 1076 9.2E-6 T 15-10-2018 AM378_14245 63a0a46e00ace82cd002add0482485e7 1162 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 6 1033 0.0 T 15-10-2018 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM378_14245 63a0a46e00ace82cd002add0482485e7 1162 Gene3D G3DSA:3.20.20.140 1 270 2.2E-93 T 15-10-2018 AM378_14245 63a0a46e00ace82cd002add0482485e7 1162 Gene3D G3DSA:1.10.10.1600 433 510 1.6E-34 T 15-10-2018 AM378_02650 f557ad0afafc82ba3c5fa2990a521937 231 Pfam PF04172 LrgB-like family 12 223 1.1E-80 T 15-10-2018 IPR007300 CidB/LrgB family AM378_02650 f557ad0afafc82ba3c5fa2990a521937 231 TIGRFAM TIGR00659 TIGR00659: TIGR00659 family protein 4 226 3.1E-99 T 15-10-2018 IPR005261 Conserved hypothetical protein CHP00659 AM378_12960 abc5af1662d8cfe471adede6ccb499b7 434 SUPERFAMILY SSF51126 44 282 1.28E-12 T 15-10-2018 IPR011050 Pectin lyase fold/virulence factor AM378_12960 abc5af1662d8cfe471adede6ccb499b7 434 Gene3D G3DSA:2.160.20.10 7 398 5.8E-12 T 15-10-2018 IPR012334 Pectin lyase fold AM378_13960 61ee14ebf50b8309dee182b72521c521 134 Hamap MF_00128 Protein NrdI [nrdI]. 3 133 35.055 T 15-10-2018 IPR020852 Ribonucleotide reductase, class Ib, NrdI, bacterial AM378_13960 61ee14ebf50b8309dee182b72521c521 134 PIRSF PIRSF005087 1 134 4.5E-53 T 15-10-2018 IPR004465 Ribonucleotide reductase Class Ib, NrdI AM378_13960 61ee14ebf50b8309dee182b72521c521 134 SUPERFAMILY SSF52218 1 132 1.08E-21 T 15-10-2018 IPR029039 Flavoprotein-like superfamily AM378_13960 61ee14ebf50b8309dee182b72521c521 134 Pfam PF07972 NrdI Flavodoxin like 5 124 4.0E-46 T 15-10-2018 IPR004465 Ribonucleotide reductase Class Ib, NrdI AM378_13960 61ee14ebf50b8309dee182b72521c521 134 TIGRFAM TIGR00333 nrdI: nrdI protein 5 132 6.4E-50 T 15-10-2018 IPR004465 Ribonucleotide reductase Class Ib, NrdI AM378_13960 61ee14ebf50b8309dee182b72521c521 134 Gene3D G3DSA:3.40.50.360 3 134 2.1E-45 T 15-10-2018 IPR029039 Flavoprotein-like superfamily AM378_23625 5e8cd80235e7980616f8eede639a1f53 152 Pfam PF00156 Phosphoribosyl transferase domain 12 145 6.2E-18 T 15-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 AM378_23625 5e8cd80235e7980616f8eede639a1f53 152 SUPERFAMILY SSF53271 4 143 4.33E-33 T 15-10-2018 IPR029057 Phosphoribosyltransferase-like AM378_23625 5e8cd80235e7980616f8eede639a1f53 152 Gene3D G3DSA:3.40.50.2020 1 152 5.5E-45 T 15-10-2018 AM378_23625 5e8cd80235e7980616f8eede639a1f53 152 Hamap MF_01903 Xanthine phosphoribosyltransferase [gpt]. 1 152 40.851 T 15-10-2018 IPR023747 Xanthine-guanine phosphoribosyltransferase GO:0000310 KEGG: 00230+2.4.2.22 AM378_16480 494cd9a45b1048dd1d16b2484ca81d77 678 Gene3D G3DSA:1.25.40.650 153 261 3.2E-41 T 15-10-2018 AM378_16480 494cd9a45b1048dd1d16b2484ca81d77 678 Hamap MF_01890 Penicillin-binding protein activator LpoA [lpoA]. 6 672 36.645 T 15-10-2018 IPR007443 Penicillin-binding protein activator LpoA AM378_16480 494cd9a45b1048dd1d16b2484ca81d77 678 Gene3D G3DSA:1.25.40.10 29 152 9.6E-43 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AM378_16480 494cd9a45b1048dd1d16b2484ca81d77 678 Pfam PF04348 LppC putative lipoprotein 358 672 1.5E-90 T 15-10-2018 IPR007443 Penicillin-binding protein activator LpoA AM378_16480 494cd9a45b1048dd1d16b2484ca81d77 678 Pfam PF04348 LppC putative lipoprotein 45 290 1.4E-55 T 15-10-2018 IPR007443 Penicillin-binding protein activator LpoA AM378_16480 494cd9a45b1048dd1d16b2484ca81d77 678 SUPERFAMILY SSF53822 263 677 4.04E-78 T 15-10-2018 IPR028082 Periplasmic binding protein-like I AM378_18015 d00432caf0f2631dd7df4aa33aef83d6 251 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 2.2E-5 T 15-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AM378_18015 d00432caf0f2631dd7df4aa33aef83d6 251 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 2.2E-5 T 15-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AM378_18015 d00432caf0f2631dd7df4aa33aef83d6 251 Gene3D G3DSA:1.10.10.10 5 68 3.2E-5 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_18015 d00432caf0f2631dd7df4aa33aef83d6 251 SMART SM00420 6 58 1.8E-18 T 15-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AM378_18015 d00432caf0f2631dd7df4aa33aef83d6 251 Pfam PF00455 DeoR C terminal sensor domain 76 230 2.3E-35 T 15-10-2018 IPR014036 DeoR C-terminal sensor domain AM378_18015 d00432caf0f2631dd7df4aa33aef83d6 251 SMART SM01134 74 232 2.3E-33 T 15-10-2018 AM378_18015 d00432caf0f2631dd7df4aa33aef83d6 251 SUPERFAMILY SSF100950 75 233 3.35E-22 T 15-10-2018 IPR037171 NagB/RpiA transferase-like AM378_18015 d00432caf0f2631dd7df4aa33aef83d6 251 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 15-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 AM378_18015 d00432caf0f2631dd7df4aa33aef83d6 251 Pfam PF08220 DeoR-like helix-turn-helix domain 6 59 7.0E-17 T 15-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AM378_18015 d00432caf0f2631dd7df4aa33aef83d6 251 SUPERFAMILY SSF46785 4 62 6.17E-11 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM378_10745 a3abdbd735f7656e535f8f7ad22c7fc5 211 SUPERFAMILY SSF52218 8 207 3.25E-30 T 15-10-2018 IPR029039 Flavoprotein-like superfamily AM378_10745 a3abdbd735f7656e535f8f7ad22c7fc5 211 Pfam PF02525 Flavodoxin-like fold 8 160 4.1E-19 T 15-10-2018 IPR003680 Flavodoxin-like fold AM378_10745 a3abdbd735f7656e535f8f7ad22c7fc5 211 Gene3D G3DSA:3.40.50.360 6 191 1.4E-32 T 15-10-2018 IPR029039 Flavoprotein-like superfamily AM378_09735 c5200b0d6aa473b5b9b425f9578012a4 217 Gene3D G3DSA:2.30.30.760 158 217 3.8E-24 T 15-10-2018 AM378_09735 c5200b0d6aa473b5b9b425f9578012a4 217 SUPERFAMILY SSF51269 89 154 6.73E-5 T 15-10-2018 IPR036732 Antifreeze-like/N-acetylneuraminic acid synthase C-terminal domain superfamily Reactome: R-HSA-4085001 AM378_09735 c5200b0d6aa473b5b9b425f9578012a4 217 TIGRFAM TIGR03170 flgA_cterm: flagella basal body P-ring formation protein FlgA 82 215 1.2E-39 T 15-10-2018 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal AM378_09735 c5200b0d6aa473b5b9b425f9578012a4 217 Pfam PF13144 Chaperone for flagella basal body P-ring formation 23 215 1.8E-43 T 15-10-2018 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal AM378_09735 c5200b0d6aa473b5b9b425f9578012a4 217 SMART SM00858 93 155 7.2E-13 T 15-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 AM378_22585 38f638fecab7bd449a0cf5650ce52d64 273 Gene3D G3DSA:3.30.360.10 131 238 9.0E-104 T 15-10-2018 AM378_22585 38f638fecab7bd449a0cf5650ce52d64 273 PIRSF PIRSF000161 4 272 3.7E-90 T 15-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AM378_22585 38f638fecab7bd449a0cf5650ce52d64 273 SUPERFAMILY SSF55347 131 240 5.01E-37 T 15-10-2018 AM378_22585 38f638fecab7bd449a0cf5650ce52d64 273 SUPERFAMILY SSF51735 4 272 4.67E-53 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily AM378_22585 38f638fecab7bd449a0cf5650ce52d64 273 Pfam PF05173 Dihydrodipicolinate reductase, C-terminus 132 268 1.0E-42 T 15-10-2018 IPR022663 Dihydrodipicolinate reductase, C-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AM378_22585 38f638fecab7bd449a0cf5650ce52d64 273 TIGRFAM TIGR00036 dapB: 4-hydroxy-tetrahydrodipicolinate reductase 6 268 9.7E-106 T 15-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AM378_22585 38f638fecab7bd449a0cf5650ce52d64 273 Hamap MF_00102 4-hydroxy-tetrahydrodipicolinate reductase [dapB]. 6 269 35.258 T 15-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AM378_22585 38f638fecab7bd449a0cf5650ce52d64 273 Gene3D G3DSA:3.40.50.720 7 268 9.0E-104 T 15-10-2018 AM378_22585 38f638fecab7bd449a0cf5650ce52d64 273 Pfam PF01113 Dihydrodipicolinate reductase, N-terminus 6 129 2.7E-42 T 15-10-2018 IPR000846 Dihydrodipicolinate reductase, N-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AM378_22585 38f638fecab7bd449a0cf5650ce52d64 273 ProSitePatterns PS01298 Dihydrodipicolinate reductase signature. 154 171 - T 15-10-2018 IPR022664 Dihydrodipicolinate reductase, conserved site GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AM378_15780 d338e6d9b9cdb69f0ced8d227fc4492a 378 Pfam PF01497 Periplasmic binding protein 71 325 1.3E-20 T 15-10-2018 IPR002491 ABC transporter periplasmic binding domain AM378_15780 d338e6d9b9cdb69f0ced8d227fc4492a 378 Gene3D G3DSA:3.40.50.1980 28 377 1.6E-93 T 15-10-2018 AM378_15780 d338e6d9b9cdb69f0ced8d227fc4492a 378 SUPERFAMILY SSF53807 29 348 2.47E-45 T 15-10-2018 AM378_09485 080e2ac6b5cf41383292e71b73fcbe24 262 SUPERFAMILY SSF52540 56 239 4.34E-31 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_09485 080e2ac6b5cf41383292e71b73fcbe24 262 Gene3D G3DSA:3.40.50.300 54 262 4.0E-66 T 15-10-2018 AM378_09485 080e2ac6b5cf41383292e71b73fcbe24 262 Pfam PF02562 PhoH-like protein 57 261 7.2E-78 T 15-10-2018 IPR003714 PhoH-like protein GO:0005524 AM378_07730 c9dc08ef2eed479f9170c5bf384cbd0f 353 TIGRFAM TIGR01620 hyp_HI0043: TIGR01620 family protein 57 342 3.3E-137 T 15-10-2018 IPR006507 Uncharacterised protein family UPF0283 AM378_07730 c9dc08ef2eed479f9170c5bf384cbd0f 353 Pfam PF05128 Domain of unknown function (DUF697) 184 342 1.2E-54 T 15-10-2018 IPR021147 Protein of unknown function DUF697 AM378_07730 c9dc08ef2eed479f9170c5bf384cbd0f 353 Hamap MF_01085 UPF0283 membrane protein YcjF [ycjF]. 4 348 38.708 T 15-10-2018 IPR006507 Uncharacterised protein family UPF0283 AM378_09285 59382e4bb8ed152b1a5aa752b355093a 389 Pfam PF05954 Phage late control gene D protein (GPD) 45 365 6.7E-38 T 15-10-2018 AM378_09285 59382e4bb8ed152b1a5aa752b355093a 389 SUPERFAMILY SSF69279 15 188 8.5E-24 T 15-10-2018 AM378_17955 7ec46651ae17fee5ddf9cfdb7bba20ae 227 Pfam PF00156 Phosphoribosyl transferase domain 185 224 7.3E-8 T 15-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 AM378_17955 7ec46651ae17fee5ddf9cfdb7bba20ae 227 SUPERFAMILY SSF53271 49 225 1.7E-38 T 15-10-2018 IPR029057 Phosphoribosyltransferase-like AM378_17955 7ec46651ae17fee5ddf9cfdb7bba20ae 227 Gene3D G3DSA:3.40.50.2020 77 227 2.1E-19 T 15-10-2018 AM378_12015 9c5f2005eb977cdaf1fa8a7f6341bcc0 143 Pfam PF07331 Tripartite tricarboxylate transporter TctB family 7 137 3.0E-20 T 15-10-2018 IPR009936 Protein of unknown function DUF1468 AM378_07055 a4771ad96aa57fb9c4ee362f6db15267 690 Pfam PF00593 TonB dependent receptor 211 689 5.4E-44 T 15-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel AM378_07055 a4771ad96aa57fb9c4ee362f6db15267 690 Pfam PF07715 TonB-dependent Receptor Plug Domain 59 157 3.9E-11 T 15-10-2018 IPR012910 TonB-dependent receptor, plug domain AM378_07055 a4771ad96aa57fb9c4ee362f6db15267 690 Gene3D G3DSA:2.40.170.20 171 690 1.5E-64 T 15-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AM378_07055 a4771ad96aa57fb9c4ee362f6db15267 690 TIGRFAM TIGR01778 TonB-copper: TonB-dependent copper receptor 58 690 2.3E-249 T 15-10-2018 IPR010100 TonB-dependent copper receptor AM378_07055 a4771ad96aa57fb9c4ee362f6db15267 690 Gene3D G3DSA:2.170.130.10 52 164 7.8E-11 T 15-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily AM378_07055 a4771ad96aa57fb9c4ee362f6db15267 690 SUPERFAMILY SSF56935 44 690 3.66E-91 T 15-10-2018 AM378_13785 3d63503ee966b17303bcf10a5742091a 162 Pfam PF07603 Protein of unknown function (DUF1566) 27 153 3.1E-14 T 15-10-2018 IPR011460 Protein of unknown function DUF1566 AM378_09290 95a7fe4eaadcdd5585e227a2cd94e9fa 161 Pfam PF06995 Phage P2 GpU 6 125 1.5E-44 T 15-10-2018 IPR009734 Myoviridae, GpU AM378_09290 95a7fe4eaadcdd5585e227a2cd94e9fa 161 PIRSF PIRSF029208 1 147 1.8E-60 T 15-10-2018 IPR016912 Bacteriophage P2, GpU AM378_11875 a326b7ee12564bb4e96b15381f73974c 93 Gene3D G3DSA:3.40.50.2300 1 88 1.0E-21 T 15-10-2018 AM378_11875 a326b7ee12564bb4e96b15381f73974c 93 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 2 83 1.3E-17 T 15-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 AM378_11875 a326b7ee12564bb4e96b15381f73974c 93 SUPERFAMILY SSF52794 1 88 2.09E-21 T 15-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 AM378_05170 953472dcc14a4d955e825ff452a7a95d 456 PIRSF PIRSF006060 8 453 8.4E-75 T 15-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 AM378_05170 953472dcc14a4d955e825ff452a7a95d 456 Pfam PF00324 Amino acid permease 25 388 7.9E-38 T 15-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 AM378_05170 953472dcc14a4d955e825ff452a7a95d 456 Gene3D G3DSA:1.20.1740.10 15 449 3.2E-70 T 15-10-2018 AM378_17345 ff4f09e9b5e76fbffbfff96923713886 189 SUPERFAMILY SSF55821 8 185 1.04E-55 T 15-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily AM378_17345 ff4f09e9b5e76fbffbfff96923713886 189 Gene3D G3DSA:3.90.870.10 5 187 2.7E-64 T 15-10-2018 AM378_17345 ff4f09e9b5e76fbffbfff96923713886 189 Pfam PF01300 Telomere recombination 15 186 4.2E-43 T 15-10-2018 IPR006070 YrdC-like domain GO:0003725 AM378_17345 ff4f09e9b5e76fbffbfff96923713886 189 Hamap MF_01852 Threonylcarbamoyl-AMP synthase [tsaC]. 6 187 41.242 T 15-10-2018 IPR023535 Threonylcarbamoyl-AMP synthase GO:0002949|GO:0005524 AM378_16850 2eb4119d9bb3ddaa2ccbacf94875e7b3 489 SUPERFAMILY SSF50249 39 128 3.62E-19 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold AM378_16850 2eb4119d9bb3ddaa2ccbacf94875e7b3 489 Pfam PF00575 S1 RNA binding domain 38 109 4.5E-7 T 15-10-2018 IPR003029 S1 domain GO:0003676 AM378_16850 2eb4119d9bb3ddaa2ccbacf94875e7b3 489 Pfam PF10150 Ribonuclease E/G family 124 393 3.3E-100 T 15-10-2018 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 AM378_16850 2eb4119d9bb3ddaa2ccbacf94875e7b3 489 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 13 426 2.4E-174 T 15-10-2018 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 AM378_16850 2eb4119d9bb3ddaa2ccbacf94875e7b3 489 SMART SM00316 37 122 2.3E-9 T 15-10-2018 IPR022967 RNA-binding domain, S1 AM378_16850 2eb4119d9bb3ddaa2ccbacf94875e7b3 489 Gene3D G3DSA:2.40.50.140 31 127 6.0E-31 T 15-10-2018 AM378_16850 2eb4119d9bb3ddaa2ccbacf94875e7b3 489 Gene3D G3DSA:3.40.1260.20 402 488 6.2E-6 T 15-10-2018 AM378_09475 0a090a9fc4d60f66a0b62862f53aee2f 99 SMART SM00530 8 65 0.0068 T 15-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM378_09475 0a090a9fc4d60f66a0b62862f53aee2f 99 Gene3D G3DSA:1.10.260.40 1 99 2.5E-38 T 15-10-2018 AM378_09475 0a090a9fc4d60f66a0b62862f53aee2f 99 SUPERFAMILY SSF47413 5 52 9.57E-8 T 15-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AM378_01455 8bd16fcaeb069da77c745b782b50ec4f 254 SUPERFAMILY SSF54001 2 253 5.07E-75 T 15-10-2018 IPR038765 Papain-like cysteine peptidase superfamily AM378_01455 8bd16fcaeb069da77c745b782b50ec4f 254 Pfam PF00797 N-acetyltransferase 19 253 1.6E-69 T 15-10-2018 IPR001447 Arylamine N-acetyltransferase GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: R-HSA-156582 AM378_01455 8bd16fcaeb069da77c745b782b50ec4f 254 PRINTS PR01543 Arylamine N-acetyltransferase signature 19 42 5.7E-17 T 15-10-2018 IPR001447 Arylamine N-acetyltransferase GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: R-HSA-156582 AM378_01455 8bd16fcaeb069da77c745b782b50ec4f 254 PRINTS PR01543 Arylamine N-acetyltransferase signature 67 89 5.7E-17 T 15-10-2018 IPR001447 Arylamine N-acetyltransferase GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: R-HSA-156582 AM378_01455 8bd16fcaeb069da77c745b782b50ec4f 254 PRINTS PR01543 Arylamine N-acetyltransferase signature 99 124 5.7E-17 T 15-10-2018 IPR001447 Arylamine N-acetyltransferase GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: R-HSA-156582 AM378_01455 8bd16fcaeb069da77c745b782b50ec4f 254 PRINTS PR01543 Arylamine N-acetyltransferase signature 43 66 5.7E-17 T 15-10-2018 IPR001447 Arylamine N-acetyltransferase GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: R-HSA-156582 AM378_01455 8bd16fcaeb069da77c745b782b50ec4f 254 Gene3D G3DSA:3.30.2140.20 1 254 6.0E-81 T 15-10-2018 AM378_11010 707b8819bd22eb6d9c6c29e35e77fc31 428 Pfam PF02653 Branched-chain amino acid transport system / permease component 120 405 1.2E-48 T 15-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 AM378_11010 707b8819bd22eb6d9c6c29e35e77fc31 428 Pfam PF11862 Domain of unknown function (DUF3382) 15 112 3.4E-19 T 15-10-2018 IPR021807 High-affinity branched-chain amino acid transport system permease, LivHM, N-terminal AM378_01715 98fe5596232c51f029869db6752dfc0f 297 Pfam PF03466 LysR substrate binding domain 89 296 3.6E-43 T 15-10-2018 IPR005119 LysR, substrate-binding AM378_01715 98fe5596232c51f029869db6752dfc0f 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 64 2.9E-18 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_01715 98fe5596232c51f029869db6752dfc0f 297 SUPERFAMILY SSF46785 7 88 1.94E-19 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM378_01715 98fe5596232c51f029869db6752dfc0f 297 Gene3D G3DSA:3.40.190.290 92 296 3.1E-63 T 15-10-2018 AM378_01715 98fe5596232c51f029869db6752dfc0f 297 SUPERFAMILY SSF53850 90 297 5.89E-44 T 15-10-2018 AM378_01715 98fe5596232c51f029869db6752dfc0f 297 Gene3D G3DSA:1.10.10.10 4 91 3.3E-25 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_22965 a8703c1b07cad00a3d736facc98a84d0 204 Pfam PF03458 UPF0126 domain 4 78 1.9E-22 T 15-10-2018 IPR005115 Uncharacterised domain UPF0126 AM378_22965 a8703c1b07cad00a3d736facc98a84d0 204 Pfam PF03458 UPF0126 domain 92 161 1.1E-18 T 15-10-2018 IPR005115 Uncharacterised domain UPF0126 AM378_10670 079c1799f64d5c199cc664b606b8a7d8 311 Pfam PF09084 NMT1/THI5 like 34 244 1.4E-67 T 15-10-2018 IPR015168 SsuA/THI5-like AM378_10670 079c1799f64d5c199cc664b606b8a7d8 311 Gene3D G3DSA:3.40.190.10 106 205 2.1E-82 T 15-10-2018 AM378_10670 079c1799f64d5c199cc664b606b8a7d8 311 SUPERFAMILY SSF53850 26 306 6.89E-50 T 15-10-2018 AM378_10670 079c1799f64d5c199cc664b606b8a7d8 311 Gene3D G3DSA:3.40.190.10 24 297 2.1E-82 T 15-10-2018 AM378_12775 7f4e98f25006338b0e93522dc200221f 92 Pfam PF09904 Winged helix-turn helix 4 90 8.8E-40 T 15-10-2018 IPR017162 Uncharacterised conserved protein UCP037266 AM378_12775 7f4e98f25006338b0e93522dc200221f 92 PIRSF PIRSF037266 1 92 1.3E-39 T 15-10-2018 IPR017162 Uncharacterised conserved protein UCP037266 AM378_12775 7f4e98f25006338b0e93522dc200221f 92 Gene3D G3DSA:1.10.10.10 3 92 2.2E-36 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_10815 4759cb3f142ba74086ceac23556d8f2b 294 Pfam PF01874 ATP:dephospho-CoA triphosphoribosyl transferase 20 288 2.8E-82 T 15-10-2018 IPR002736 Triphosphoribosyl-dephospho-CoA protein GO:0005524|GO:0016310|GO:0046917 MetaCyc: PWY-5796 AM378_10815 4759cb3f142ba74086ceac23556d8f2b 294 Gene3D G3DSA:1.10.4200.10 165 292 4.4E-7 T 15-10-2018 AM378_10815 4759cb3f142ba74086ceac23556d8f2b 294 TIGRFAM TIGR03125 citrate_citG: triphosphoribosyl-dephospho-CoA synthase CitG 20 289 9.8E-100 T 15-10-2018 IPR017551 Triphosphoribosyl-dephospho-CoA synthase CitG GO:0005524|GO:0016310|GO:0046917 MetaCyc: PWY-5796 AM378_10815 4759cb3f142ba74086ceac23556d8f2b 294 Hamap MF_00397 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase [citG]. 1 294 167.269 T 15-10-2018 IPR017551 Triphosphoribosyl-dephospho-CoA synthase CitG GO:0005524|GO:0016310|GO:0046917 MetaCyc: PWY-5796 AM378_04660 e0128c1a3baaca0fa6b1bf6f727f0c0b 651 TIGRFAM TIGR02123 TRAP_fused: TRAP transporter, 4TM/12TM fusion protein 31 641 5.5E-197 T 15-10-2018 IPR011853 TRAP C4-dicarboxylate transport system permease, fused DctM-DctQ AM378_04660 e0128c1a3baaca0fa6b1bf6f727f0c0b 651 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 132 563 5.0E-92 T 15-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit AM378_06110 03ca1f1ff957778027bde8474f8617b7 510 Pfam PF06097 Bacterial protein of unknown function (DUF945) 1 479 3.7E-138 T 15-10-2018 IPR010352 Protein of unknown function DUF945 AM378_08610 3f10e579bd5f611d373f13d7cf3494ba 114 Gene3D G3DSA:3.30.1330.40 1 114 9.6E-34 T 15-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 AM378_08610 3f10e579bd5f611d373f13d7cf3494ba 114 Pfam PF01042 Endoribonuclease L-PSP 4 113 2.1E-24 T 15-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 AM378_08610 3f10e579bd5f611d373f13d7cf3494ba 114 SUPERFAMILY SSF55298 3 113 6.6E-26 T 15-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 AM378_12450 042486a40de98d4d009d95b9f9db2388 131 SUPERFAMILY SSF55729 10 120 2.96E-21 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase AM378_12450 042486a40de98d4d009d95b9f9db2388 131 Gene3D G3DSA:3.40.630.30 2 131 5.5E-31 T 15-10-2018 AM378_12450 042486a40de98d4d009d95b9f9db2388 131 Pfam PF13508 Acetyltransferase (GNAT) domain 49 118 1.2E-11 T 15-10-2018 IPR000182 GNAT domain AM378_23760 137a7acd6dfa35153befddfa88a05d29 175 SUPERFAMILY SSF49401 25 175 5.47E-29 T 15-10-2018 IPR008966 Adhesion domain superfamily AM378_23760 137a7acd6dfa35153befddfa88a05d29 175 Pfam PF00419 Fimbrial protein 31 174 7.2E-10 T 15-10-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM378_23760 137a7acd6dfa35153befddfa88a05d29 175 Gene3D G3DSA:2.60.40.1090 25 174 5.5E-26 T 15-10-2018 IPR036937 Fimbrial-type adhesion domain superfamily GO:0007155|GO:0009289 AM378_16350 9a5ea7ce3b92aa450846190d1090907c 496 Gene3D G3DSA:1.10.10.10 12 89 4.0E-20 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_16350 9a5ea7ce3b92aa450846190d1090907c 496 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 44 58 1.4E-5 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM378_16350 9a5ea7ce3b92aa450846190d1090907c 496 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 58 74 1.4E-5 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM378_16350 9a5ea7ce3b92aa450846190d1090907c 496 Pfam PF00155 Aminotransferase class I and II 157 478 1.2E-23 T 15-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AM378_16350 9a5ea7ce3b92aa450846190d1090907c 496 Pfam PF00392 Bacterial regulatory proteins, gntR family 23 84 1.6E-13 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM378_16350 9a5ea7ce3b92aa450846190d1090907c 496 Gene3D G3DSA:3.40.640.10 117 481 3.8E-114 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AM378_16350 9a5ea7ce3b92aa450846190d1090907c 496 SMART SM00345 25 84 2.5E-12 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM378_16350 9a5ea7ce3b92aa450846190d1090907c 496 SUPERFAMILY SSF46785 18 86 2.04E-18 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM378_16350 9a5ea7ce3b92aa450846190d1090907c 496 SUPERFAMILY SSF53383 126 486 3.46E-85 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM378_06050 155a97464bb521dfceba3d50c2710de8 181 SUPERFAMILY SSF52540 6 163 1.4E-17 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_06050 155a97464bb521dfceba3d50c2710de8 181 Gene3D G3DSA:3.40.50.300 5 172 1.5E-7 T 15-10-2018 AM378_06050 155a97464bb521dfceba3d50c2710de8 181 Pfam PF13521 AAA domain 7 170 1.2E-42 T 15-10-2018 IPR038727 NadR/Ttd14, AAA domain AM378_12680 6e6f1b1215cdca2b0d12e7de84fceb3f 753 Gene3D G3DSA:2.40.170.20 184 753 3.9E-81 T 15-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AM378_12680 6e6f1b1215cdca2b0d12e7de84fceb3f 753 Pfam PF07715 TonB-dependent Receptor Plug Domain 67 166 4.6E-8 T 15-10-2018 IPR012910 TonB-dependent receptor, plug domain AM378_12680 6e6f1b1215cdca2b0d12e7de84fceb3f 753 SUPERFAMILY SSF56935 66 753 1.62E-58 T 15-10-2018 AM378_12680 6e6f1b1215cdca2b0d12e7de84fceb3f 753 Pfam PF00593 TonB dependent receptor 233 752 1.5E-36 T 15-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel AM378_12680 6e6f1b1215cdca2b0d12e7de84fceb3f 753 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 736 753 - T 15-10-2018 IPR010917 TonB-dependent receptor, conserved site AM378_12680 6e6f1b1215cdca2b0d12e7de84fceb3f 753 Gene3D G3DSA:2.170.130.10 60 182 7.5E-38 T 15-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily AM378_00570 52934b3e726619eeba03cd711c55a666 183 ProSitePatterns PS00201 Flavodoxin signature. 6 22 - T 15-10-2018 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 AM378_00570 52934b3e726619eeba03cd711c55a666 183 SUPERFAMILY SSF52218 1 182 4.46E-44 T 15-10-2018 IPR029039 Flavoprotein-like superfamily AM378_00570 52934b3e726619eeba03cd711c55a666 183 Gene3D G3DSA:3.40.50.360 1 183 3.2E-56 T 15-10-2018 IPR029039 Flavoprotein-like superfamily AM378_00570 52934b3e726619eeba03cd711c55a666 183 Pfam PF03358 NADPH-dependent FMN reductase 36 113 1.0E-9 T 15-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 AM378_09305 7f030d0c62b7d754039b849d8aa76eb9 100 Pfam PF10109 Phage tail assembly chaperone proteins, E, or 41 or 14 16 94 1.8E-9 T 15-10-2018 IPR019289 Bacteriophage tail protein Gp41, putative AM378_15725 536430857ae7447e4d542f9b0d5c45d4 252 SUPERFAMILY SSF46894 24 101 7.65E-14 T 15-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AM378_15725 536430857ae7447e4d542f9b0d5c45d4 252 Gene3D G3DSA:1.10.10.10 5 119 3.0E-16 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_15725 536430857ae7447e4d542f9b0d5c45d4 252 Pfam PF00486 Transcriptional regulatory protein, C terminal 26 101 4.2E-12 T 15-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AM378_15725 536430857ae7447e4d542f9b0d5c45d4 252 SMART SM00862 25 101 1.0E-11 T 15-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AM378_24210 6c12a9d7292c0063ace3f1a6136b8bce 110 TIGRFAM TIGR00739 yajC: preprotein translocase, YajC subunit 21 102 8.6E-33 T 15-10-2018 IPR003849 Preprotein translocase YajC AM378_24210 6c12a9d7292c0063ace3f1a6136b8bce 110 Pfam PF02699 Preprotein translocase subunit 23 99 8.6E-26 T 15-10-2018 IPR003849 Preprotein translocase YajC AM378_24210 6c12a9d7292c0063ace3f1a6136b8bce 110 SMART SM01323 19 102 1.4E-34 T 15-10-2018 IPR003849 Preprotein translocase YajC AM378_24210 6c12a9d7292c0063ace3f1a6136b8bce 110 PRINTS PR01853 Bacterial YajC preprotein translocase signature 21 41 7.7E-17 T 15-10-2018 IPR003849 Preprotein translocase YajC AM378_24210 6c12a9d7292c0063ace3f1a6136b8bce 110 PRINTS PR01853 Bacterial YajC preprotein translocase signature 59 77 7.7E-17 T 15-10-2018 IPR003849 Preprotein translocase YajC AM378_13175 37cf44bee6283547eb5f159b41a08a4d 152 Pfam PF08816 Inhibitor of vertebrate lysozyme (Ivy) 35 150 5.7E-49 T 15-10-2018 AM378_13175 37cf44bee6283547eb5f159b41a08a4d 152 Gene3D G3DSA:3.40.1420.10 25 152 4.2E-47 T 15-10-2018 IPR036501 Inhibitor of vertebrate lysozyme superfamily AM378_13175 37cf44bee6283547eb5f159b41a08a4d 152 SUPERFAMILY SSF89872 28 152 1.31E-47 T 15-10-2018 IPR036501 Inhibitor of vertebrate lysozyme superfamily AM378_13175 37cf44bee6283547eb5f159b41a08a4d 152 PIRSF PIRSF009103 3 152 9.8E-54 T 15-10-2018 IPR014453 Inhibitor of vertebrate lysozyme GO:0042597|GO:0043086 AM378_21450 396f45f56e363214e68f0f82ef42c426 90 Gene3D G3DSA:3.40.1440.10 1 83 2.9E-24 T 15-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 AM378_21450 396f45f56e363214e68f0f82ef42c426 90 Pfam PF01541 GIY-YIG catalytic domain 7 65 7.9E-10 T 15-10-2018 IPR000305 GIY-YIG endonuclease AM378_21450 396f45f56e363214e68f0f82ef42c426 90 SUPERFAMILY SSF82771 4 64 7.19E-10 T 15-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 AM378_03450 9756a7f9f9295a168945dee1160d7c76 760 Gene3D G3DSA:3.20.70.20 2 760 0.0 T 15-10-2018 AM378_03450 9756a7f9f9295a168945dee1160d7c76 760 PIRSF PIRSF000379 8 760 0.0 T 15-10-2018 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493 AM378_03450 9756a7f9f9295a168945dee1160d7c76 760 SUPERFAMILY SSF51998 4 759 1.37E-290 T 15-10-2018 AM378_03450 9756a7f9f9295a168945dee1160d7c76 760 ProSitePatterns PS00850 Glycine radical domain signature. 730 738 - T 15-10-2018 IPR019777 Formate C-acetyltransferase glycine radical, conserved site AM378_03450 9756a7f9f9295a168945dee1160d7c76 760 TIGRFAM TIGR01255 pyr_form_ly_1: formate acetyltransferase 11 760 0.0 T 15-10-2018 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493 AM378_03450 9756a7f9f9295a168945dee1160d7c76 760 Pfam PF02901 Pyruvate formate lyase-like 23 614 1.5E-207 T 15-10-2018 IPR004184 Pyruvate formate lyase domain GO:0003824 AM378_03450 9756a7f9f9295a168945dee1160d7c76 760 Pfam PF01228 Glycine radical 630 741 5.9E-43 T 15-10-2018 IPR001150 Glycine radical domain GO:0003824 AM378_10600 5a4c2a69818f529cf7391d6608169fda 245 Pfam PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal 12 44 6.4E-14 T 15-10-2018 IPR024756 Protocatechuate 3,4-dioxygenase beta subunit, N-terminal KEGG: 00362+1.13.11.3|KEGG: 00624+1.13.11.3|MetaCyc: PWY-6041 AM378_10600 5a4c2a69818f529cf7391d6608169fda 245 SUPERFAMILY SSF49482 10 240 2.88E-76 T 15-10-2018 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 AM378_10600 5a4c2a69818f529cf7391d6608169fda 245 TIGRFAM TIGR02422 protocat_beta: protocatechuate 3,4-dioxygenase, beta subunit 18 239 5.2E-108 T 15-10-2018 IPR012785 Protocatechuate 3,4-dioxygenase, beta subunit GO:0005506|GO:0018578|GO:0019619|GO:0055114 KEGG: 00362+1.13.11.3|KEGG: 00624+1.13.11.3|MetaCyc: PWY-6041 AM378_10600 5a4c2a69818f529cf7391d6608169fda 245 Pfam PF00775 Dioxygenase 49 231 7.2E-55 T 15-10-2018 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 AM378_10600 5a4c2a69818f529cf7391d6608169fda 245 ProSitePatterns PS00083 Intradiol ring-cleavage dioxygenases signature. 82 110 - T 15-10-2018 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 AM378_10600 5a4c2a69818f529cf7391d6608169fda 245 Gene3D G3DSA:2.60.130.10 3 242 7.3E-92 T 15-10-2018 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 AM378_18235 b9a277c154322cbfff386adbce3e244a 531 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 29 516 2.3E-101 T 15-10-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0016021|GO:0022857|GO:0055085 AM378_18235 b9a277c154322cbfff386adbce3e244a 531 ProSitePatterns PS00217 Sugar transport proteins signature 2. 120 145 - T 15-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AM378_18235 b9a277c154322cbfff386adbce3e244a 531 Pfam PF07690 Major Facilitator Superfamily 29 422 6.8E-41 T 15-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM378_18235 b9a277c154322cbfff386adbce3e244a 531 SUPERFAMILY SSF103473 13 520 6.28E-54 T 15-10-2018 IPR036259 MFS transporter superfamily AM378_18235 b9a277c154322cbfff386adbce3e244a 531 Gene3D G3DSA:1.20.1720.10 26 225 1.9E-33 T 15-10-2018 AM378_23390 f2e4312f574ba9c22bd9a409ea45d189 243 Pfam PF02578 Multi-copper polyphenol oxidoreductase laccase 20 241 1.2E-78 T 15-10-2018 IPR003730 Multi-copper polyphenol oxidoreductase AM378_23390 f2e4312f574ba9c22bd9a409ea45d189 243 SUPERFAMILY SSF64438 3 242 3.11E-88 T 15-10-2018 IPR011324 Cytotoxic necrotizing factor-like, catalytic AM378_23390 f2e4312f574ba9c22bd9a409ea45d189 243 Gene3D G3DSA:3.60.140.10 1 243 4.6E-95 T 15-10-2018 IPR038371 Multi-copper polyphenol oxidoreductase superfamily AM378_23390 f2e4312f574ba9c22bd9a409ea45d189 243 TIGRFAM TIGR00726 TIGR00726: YfiH family protein 25 242 2.3E-69 T 15-10-2018 IPR003730 Multi-copper polyphenol oxidoreductase AM378_18040 cbd286f3b27062bc6a13d620b39be5ba 815 TIGRFAM TIGR02093 P_ylase: glycogen/starch/alpha-glucan phosphorylases 14 810 0.0 T 15-10-2018 IPR011833 Glycogen/starch/alpha-glucan phosphorylase GO:0004645|GO:0005975|GO:0030170 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 AM378_18040 cbd286f3b27062bc6a13d620b39be5ba 815 ProSitePatterns PS00102 Phosphorylase pyridoxal-phosphate attachment site. 654 666 - T 15-10-2018 IPR035090 Phosphorylase pyridoxal-phosphate attachment site KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 AM378_18040 cbd286f3b27062bc6a13d620b39be5ba 815 Gene3D G3DSA:3.40.50.2000 28 812 0.0 T 15-10-2018 AM378_18040 cbd286f3b27062bc6a13d620b39be5ba 815 PIRSF PIRSF000460 2 815 7.5E-233 T 15-10-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 AM378_18040 cbd286f3b27062bc6a13d620b39be5ba 815 SUPERFAMILY SSF53756 9 814 0.0 T 15-10-2018 AM378_18040 cbd286f3b27062bc6a13d620b39be5ba 815 Pfam PF00343 Carbohydrate phosphorylase 102 810 0.0 T 15-10-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 AM378_18040 cbd286f3b27062bc6a13d620b39be5ba 815 Gene3D G3DSA:3.40.50.2000 468 795 0.0 T 15-10-2018 AM378_21985 77b21f706a7811c64b852ad7fca970dc 135 Gene3D G3DSA:3.30.420.270 62 130 1.8E-14 T 15-10-2018 AM378_21985 77b21f706a7811c64b852ad7fca970dc 135 Pfam PF02472 Biopolymer transport protein ExbD/TolR 8 134 3.6E-30 T 15-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 AM378_17400 b2a5df7d1444d8d2734a951a789ca333 124 Pfam PF09350 Domain of unknown function (DUF1992) 7 72 9.8E-24 T 15-10-2018 IPR018961 DnaJ homologue, subfamily C, member 28, conserved domain AM378_23960 2d96d820250ed8962819c267dcff7224 150 Pfam PF04134 Protein of unknown function, DUF393 17 126 1.0E-29 T 15-10-2018 IPR007263 Protein of unknown function DUF393 AM378_06000 85df1bf4e2ce2e7e29dc6263d1be4192 232 PIRSF PIRSF006102 1 219 8.0E-77 T 15-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 AM378_06000 85df1bf4e2ce2e7e29dc6263d1be4192 232 Hamap MF_00478 Ion-translocating oxidoreductase complex subunit E [rsxE]. 1 210 27.391 T 15-10-2018 IPR010968 Ion-translocating oxidoreductase complex subunit E GO:0016020|GO:0022900 AM378_06000 85df1bf4e2ce2e7e29dc6263d1be4192 232 TIGRFAM TIGR01948 rnfE: electron transport complex, RnfABCDGE type, E subunit 6 209 9.2E-83 T 15-10-2018 IPR010968 Ion-translocating oxidoreductase complex subunit E GO:0016020|GO:0022900 AM378_06000 85df1bf4e2ce2e7e29dc6263d1be4192 232 Pfam PF02508 Rnf-Nqr subunit, membrane protein 6 199 1.7E-62 T 15-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 AM378_17120 d075bf61ea0306fcdb289d262c8d8897 290 Gene3D G3DSA:1.10.357.140 23 185 8.4E-41 T 15-10-2018 AM378_17120 d075bf61ea0306fcdb289d262c8d8897 290 Pfam PF01040 UbiA prenyltransferase family 28 270 1.7E-67 T 15-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 AM378_17120 d075bf61ea0306fcdb289d262c8d8897 290 Hamap MF_01635 4-hydroxybenzoate octaprenyltransferase [ubiA]. 5 288 30.562 T 15-10-2018 IPR006370 4-hydroxybenzoate polyprenyltransferase-like GO:0004659|GO:0016021 Reactome: R-HSA-1268020|Reactome: R-HSA-2142789 AM378_17120 d075bf61ea0306fcdb289d262c8d8897 290 TIGRFAM TIGR01474 ubiA_proteo: 4-hydroxybenzoate polyprenyl transferase 10 288 2.2E-111 T 15-10-2018 IPR006370 4-hydroxybenzoate polyprenyltransferase-like GO:0004659|GO:0016021 Reactome: R-HSA-1268020|Reactome: R-HSA-2142789 AM378_14375 9748f23797fc57b7aebca09c87b25434 182 Hamap MF_01104 Protein Syd [syd]. 3 181 36.538 T 15-10-2018 IPR009948 Syd GO:0009898 AM378_14375 9748f23797fc57b7aebca09c87b25434 182 Gene3D G3DSA:3.40.1580.20 1 181 4.0E-68 T 15-10-2018 IPR038228 Syd superfamily AM378_14375 9748f23797fc57b7aebca09c87b25434 182 Pfam PF07348 Syd protein (SUKH-2) 7 179 1.4E-71 T 15-10-2018 IPR009948 Syd GO:0009898 AM378_07585 4cdbe1c3d29bffc62da008a48f0a2aff 499 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 405 426 9.3E-42 T 15-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 AM378_07585 4cdbe1c3d29bffc62da008a48f0a2aff 499 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 152 172 9.3E-42 T 15-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 AM378_07585 4cdbe1c3d29bffc62da008a48f0a2aff 499 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 268 287 9.3E-42 T 15-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 AM378_07585 4cdbe1c3d29bffc62da008a48f0a2aff 499 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 295 311 9.3E-42 T 15-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 AM378_07585 4cdbe1c3d29bffc62da008a48f0a2aff 499 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 450 468 9.3E-42 T 15-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 AM378_07585 4cdbe1c3d29bffc62da008a48f0a2aff 499 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 248 267 9.3E-42 T 15-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 AM378_07585 4cdbe1c3d29bffc62da008a48f0a2aff 499 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 335 354 9.3E-42 T 15-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 AM378_07585 4cdbe1c3d29bffc62da008a48f0a2aff 499 Pfam PF02074 Carboxypeptidase Taq (M32) metallopeptidase 16 498 1.4E-93 T 15-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 AM378_07585 4cdbe1c3d29bffc62da008a48f0a2aff 499 PIRSF PIRSF006615 6 499 2.2E-191 T 15-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 AM378_07585 4cdbe1c3d29bffc62da008a48f0a2aff 499 Gene3D G3DSA:1.10.1370.30 6 499 1.5E-197 T 15-10-2018 AM378_07585 4cdbe1c3d29bffc62da008a48f0a2aff 499 SUPERFAMILY SSF55486 7 499 3.17E-116 T 15-10-2018 AM378_11260 690a4a007cea9bad04c82af42a3cf53b 455 PIRSF PIRSF006060 7 453 9.7E-75 T 15-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 AM378_11260 690a4a007cea9bad04c82af42a3cf53b 455 Gene3D G3DSA:1.20.1740.10 15 449 2.8E-67 T 15-10-2018 AM378_11260 690a4a007cea9bad04c82af42a3cf53b 455 Pfam PF00324 Amino acid permease 27 424 4.8E-36 T 15-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 AM378_19470 fa0986325ea3cc8e9f3a6125f0bd75e4 115 Pfam PF07119 Protein of unknown function (DUF1375) 13 75 1.5E-14 T 15-10-2018 IPR010780 Protein of unknown function DUF1375 AM378_04625 505e061f2a238b902922f72251dbe8a5 309 Gene3D G3DSA:3.40.50.2300 130 299 1.6E-87 T 15-10-2018 AM378_04625 505e061f2a238b902922f72251dbe8a5 309 Gene3D G3DSA:3.40.50.2300 27 293 1.6E-87 T 15-10-2018 AM378_04625 505e061f2a238b902922f72251dbe8a5 309 SUPERFAMILY SSF53822 23 303 8.1E-82 T 15-10-2018 IPR028082 Periplasmic binding protein-like I AM378_04625 505e061f2a238b902922f72251dbe8a5 309 Pfam PF13407 Periplasmic binding protein domain 27 283 3.0E-58 T 15-10-2018 IPR025997 Periplasmic binding protein AM378_03250 4b7e31d095477e095ab8abb0fe5e8c2b 83 SUPERFAMILY SSF143120 11 69 1.83E-6 T 15-10-2018 IPR036165 YefM-like superfamily AM378_03250 4b7e31d095477e095ab8abb0fe5e8c2b 83 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 11 74 5.1E-6 T 15-10-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM AM378_17005 e9180e2cc5ef94152934a1d4acff8ef2 249 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 18 248 2.3E-62 T 15-10-2018 AM378_17005 e9180e2cc5ef94152934a1d4acff8ef2 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 86 97 5.9E-12 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_17005 e9180e2cc5ef94152934a1d4acff8ef2 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 137 145 5.9E-12 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_17005 e9180e2cc5ef94152934a1d4acff8ef2 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 158 177 5.9E-12 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_17005 e9180e2cc5ef94152934a1d4acff8ef2 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 11 28 3.1E-38 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_17005 e9180e2cc5ef94152934a1d4acff8ef2 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 179 196 3.1E-38 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_17005 e9180e2cc5ef94152934a1d4acff8ef2 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 131 147 3.1E-38 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_17005 e9180e2cc5ef94152934a1d4acff8ef2 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 211 231 3.1E-38 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_17005 e9180e2cc5ef94152934a1d4acff8ef2 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 86 97 3.1E-38 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_17005 e9180e2cc5ef94152934a1d4acff8ef2 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 158 177 3.1E-38 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM378_17005 e9180e2cc5ef94152934a1d4acff8ef2 249 SUPERFAMILY SSF51735 9 248 6.33E-78 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily AM378_17005 e9180e2cc5ef94152934a1d4acff8ef2 249 Gene3D G3DSA:3.40.50.720 5 249 7.5E-82 T 15-10-2018 AM378_12940 f55e86c5fb75b42d797491c3408a24fc 208 Hamap MF_01218_B Uracil phosphoribosyltransferase [upp]. 2 208 44.253 T 15-10-2018 IPR034332 Uracil phosphoribosyltransferase, bacterial-type KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 AM378_12940 f55e86c5fb75b42d797491c3408a24fc 208 TIGRFAM TIGR01091 upp: uracil phosphoribosyltransferase 3 208 7.1E-91 T 15-10-2018 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 AM378_12940 f55e86c5fb75b42d797491c3408a24fc 208 Pfam PF14681 Uracil phosphoribosyltransferase 7 207 1.2E-64 T 15-10-2018 AM378_12940 f55e86c5fb75b42d797491c3408a24fc 208 Gene3D G3DSA:3.40.50.2020 1 208 1.9E-72 T 15-10-2018 AM378_12940 f55e86c5fb75b42d797491c3408a24fc 208 SUPERFAMILY SSF53271 4 206 1.06E-66 T 15-10-2018 IPR029057 Phosphoribosyltransferase-like AM378_18285 03460d83dac074d0b683604b2955912a 137 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 9 131 3.1E-16 T 15-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AM378_18285 03460d83dac074d0b683604b2955912a 137 SUPERFAMILY SSF54593 6 135 1.79E-27 T 15-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AM378_18285 03460d83dac074d0b683604b2955912a 137 Gene3D G3DSA:3.10.180.10 10 133 2.0E-27 T 15-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AM378_01495 dd92707102320e2b1d734f728945d2fb 225 Gene3D G3DSA:3.40.50.880 1 225 2.7E-64 T 15-10-2018 IPR029062 Class I glutamine amidotransferase-like AM378_01495 dd92707102320e2b1d734f728945d2fb 225 Pfam PF01965 DJ-1/PfpI family 7 165 3.0E-26 T 15-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 AM378_01495 dd92707102320e2b1d734f728945d2fb 225 SUPERFAMILY SSF52317 7 188 5.29E-44 T 15-10-2018 IPR029062 Class I glutamine amidotransferase-like AM378_07060 fa8c1a89e5b9565e9763790c34cfb715 184 SUPERFAMILY SSF52218 1 165 4.19E-40 T 15-10-2018 IPR029039 Flavoprotein-like superfamily AM378_07060 fa8c1a89e5b9565e9763790c34cfb715 184 Pfam PF02525 Flavodoxin-like fold 1 156 2.9E-38 T 15-10-2018 IPR003680 Flavodoxin-like fold AM378_07060 fa8c1a89e5b9565e9763790c34cfb715 184 Gene3D G3DSA:3.40.50.360 1 183 7.9E-49 T 15-10-2018 IPR029039 Flavoprotein-like superfamily AM378_14935 d597447e4816ed8b6c667c03ebcc9ca7 223 Gene3D G3DSA:3.20.20.70 3 223 1.9E-75 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM378_14935 d597447e4816ed8b6c667c03ebcc9ca7 223 SUPERFAMILY SSF51366 1 216 1.88E-54 T 15-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 AM378_14935 d597447e4816ed8b6c667c03ebcc9ca7 223 ProSitePatterns PS01086 Ribulose-phosphate 3-epimerase family signature 2. 134 156 - T 15-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 AM378_14935 d597447e4816ed8b6c667c03ebcc9ca7 223 Pfam PF00834 Ribulose-phosphate 3 epimerase family 5 199 2.7E-61 T 15-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 AM378_14935 d597447e4816ed8b6c667c03ebcc9ca7 223 ProSitePatterns PS01085 Ribulose-phosphate 3-epimerase family signature 1. 31 45 - T 15-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 AM378_19960 fc04d67f16b195482be9a37f8b8e2e54 500 Gene3D G3DSA:3.30.830.10 8 255 5.7E-44 T 15-10-2018 AM378_19960 fc04d67f16b195482be9a37f8b8e2e54 500 SUPERFAMILY SSF63411 338 463 1.69E-7 T 15-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AM378_19960 fc04d67f16b195482be9a37f8b8e2e54 500 Pfam PF00675 Insulinase (Peptidase family M16) 52 160 3.6E-9 T 15-10-2018 IPR011765 Peptidase M16, N-terminal AM378_19960 fc04d67f16b195482be9a37f8b8e2e54 500 Gene3D G3DSA:3.30.830.10 257 472 5.8E-101 T 15-10-2018 AM378_19960 fc04d67f16b195482be9a37f8b8e2e54 500 SUPERFAMILY SSF63411 29 240 1.75E-24 T 15-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AM378_19960 fc04d67f16b195482be9a37f8b8e2e54 500 Pfam PF05193 Peptidase M16 inactive domain 201 378 1.3E-18 T 15-10-2018 IPR007863 Peptidase M16, C-terminal AM378_13860 eb9bac3ea294c4b6c11eeb6a58a5292d 165 SUPERFAMILY SSF55729 3 151 2.23E-36 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase AM378_13860 eb9bac3ea294c4b6c11eeb6a58a5292d 165 Pfam PF00583 Acetyltransferase (GNAT) family 41 133 2.1E-18 T 15-10-2018 IPR000182 GNAT domain AM378_13860 eb9bac3ea294c4b6c11eeb6a58a5292d 165 Gene3D G3DSA:3.40.630.30 1 158 7.4E-49 T 15-10-2018 AM378_11710 00f2a701a3ae79240a5e9af37f561d7a 343 Gene3D G3DSA:3.40.50.720 157 290 1.3E-80 T 15-10-2018 AM378_11710 00f2a701a3ae79240a5e9af37f561d7a 343 SUPERFAMILY SSF51735 146 303 1.58E-30 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily AM378_11710 00f2a701a3ae79240a5e9af37f561d7a 343 Pfam PF00107 Zinc-binding dehydrogenase 180 304 7.8E-24 T 15-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AM378_11710 00f2a701a3ae79240a5e9af37f561d7a 343 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 30 139 6.2E-27 T 15-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AM378_11710 00f2a701a3ae79240a5e9af37f561d7a 343 Gene3D G3DSA:3.90.180.10 31 335 1.3E-80 T 15-10-2018 AM378_11710 00f2a701a3ae79240a5e9af37f561d7a 343 SUPERFAMILY SSF50129 8 176 1.67E-36 T 15-10-2018 IPR011032 GroES-like superfamily AM378_16260 6f550156548ddf4ce110082de8453bb8 738 Pfam PF05840 Bacteriophage replication gene A protein (GPA) 118 446 1.2E-101 T 15-10-2018 IPR008766 Replication gene A protein GO:0006260 AM378_10770 e793543a779a3c334c46ddeef0aac32f 209 Gene3D G3DSA:2.40.30.130 1 77 1.6E-18 T 15-10-2018 AM378_10770 e793543a779a3c334c46ddeef0aac32f 209 SUPERFAMILY SSF50447 3 75 2.58E-13 T 15-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily AM378_10770 e793543a779a3c334c46ddeef0aac32f 209 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 168 196 4.3E-5 T 15-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 AM378_10770 e793543a779a3c334c46ddeef0aac32f 209 Gene3D G3DSA:3.30.980.10 155 209 2.2E-5 T 15-10-2018 AM378_10770 e793543a779a3c334c46ddeef0aac32f 209 SUPERFAMILY SSF55186 85 201 1.7E-21 T 15-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 AM378_19915 5321ad89992040875c73897c8f4e78e9 522 TIGRFAM TIGR03369 cellulose_bcsE: cellulose biosynthesis protein BcsE 156 472 5.2E-102 T 15-10-2018 IPR017745 BcsE, GIL domain GO:0035438 AM378_19915 5321ad89992040875c73897c8f4e78e9 522 Pfam PF10995 GGDEF I-site like or GIL domain 160 472 2.1E-125 T 15-10-2018 IPR017745 BcsE, GIL domain GO:0035438 AM378_02360 acef5db1414070da698c61eda7eaeafa 839 Pfam PF15976 CS1-pili formation C-terminal 729 821 2.8E-27 T 15-10-2018 IPR031917 Pilus assembly protein, C-terminal domain AM378_02360 acef5db1414070da698c61eda7eaeafa 839 Pfam PF16967 E-set like domain 280 347 7.9E-24 T 15-10-2018 IPR032636 Pilus assembly protein, E-set like domain AM378_19390 fab6c9d4c23a5bb75dd89145ac11574d 241 SUPERFAMILY SSF56214 98 196 1.17E-6 T 15-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 AM378_19390 fab6c9d4c23a5bb75dd89145ac11574d 241 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 99 186 1.6E-4 T 15-10-2018 IPR008278 4'-phosphopantetheinyl transferase domain GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 AM378_19390 fab6c9d4c23a5bb75dd89145ac11574d 241 SUPERFAMILY SSF56214 22 90 3.98E-5 T 15-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 AM378_19390 fab6c9d4c23a5bb75dd89145ac11574d 241 Gene3D G3DSA:3.90.470.20 6 116 5.5E-10 T 15-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 AM378_09275 c28104071f37cea7c7078c45d4573ea2 300 Pfam PF05118 Aspartyl/Asparaginyl beta-hydroxylase 69 222 1.8E-48 T 15-10-2018 IPR007803 Aspartyl/asparaginy/proline hydroxylase GO:0018193 AM378_09275 c28104071f37cea7c7078c45d4573ea2 300 SUPERFAMILY SSF51197 95 223 3.84E-18 T 15-10-2018 AM378_09275 c28104071f37cea7c7078c45d4573ea2 300 Gene3D G3DSA:2.60.120.330 43 230 5.3E-44 T 15-10-2018 IPR027443 Isopenicillin N synthase-like AM378_07025 aa4cb87f3d25d5a001cfa720fcfe8a9e 49 Pfam PF04229 GrpB protein 6 43 2.9E-8 T 15-10-2018 IPR007344 GrpB/Dephospho-CoA kinase AM378_07025 aa4cb87f3d25d5a001cfa720fcfe8a9e 49 SUPERFAMILY SSF81301 8 43 1.01E-6 T 15-10-2018 AM378_07025 aa4cb87f3d25d5a001cfa720fcfe8a9e 49 Gene3D G3DSA:3.30.460.10 2 45 8.4E-8 T 15-10-2018 AM378_07480 8fc2f17fb694f000ecbf667ca7cab01c 238 Gene3D G3DSA:3.40.50.880 1 233 1.1E-45 T 15-10-2018 IPR029062 Class I glutamine amidotransferase-like AM378_07480 8fc2f17fb694f000ecbf667ca7cab01c 238 Pfam PF00117 Glutamine amidotransferase class-I 28 186 2.7E-11 T 15-10-2018 IPR017926 Glutamine amidotransferase AM378_07480 8fc2f17fb694f000ecbf667ca7cab01c 238 SUPERFAMILY SSF52317 20 232 7.8E-39 T 15-10-2018 IPR029062 Class I glutamine amidotransferase-like AM378_16520 986910467f383ab1e43806372cf0e8e6 310 TIGRFAM TIGR01212 TIGR01212: radical SAM protein, TIGR01212 family 6 301 1.7E-126 T 15-10-2018 IPR005911 Protein YhcC-like GO:0051536 AM378_16520 986910467f383ab1e43806372cf0e8e6 310 Pfam PF16199 Radical_SAM C-terminal domain 208 287 5.4E-16 T 15-10-2018 IPR032432 Radical SAM, C-terminal extension Reactome: R-HSA-3214847 AM378_16520 986910467f383ab1e43806372cf0e8e6 310 SMART SM00729 23 247 2.2E-41 T 15-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 AM378_16520 986910467f383ab1e43806372cf0e8e6 310 SUPERFAMILY SSF102114 13 251 2.09E-44 T 15-10-2018 AM378_16520 986910467f383ab1e43806372cf0e8e6 310 Pfam PF04055 Radical SAM superfamily 43 201 1.9E-16 T 15-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AM378_16520 986910467f383ab1e43806372cf0e8e6 310 Gene3D G3DSA:3.80.30.20 41 236 2.1E-16 T 15-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe AM378_14275 0fa2ceadada01e429b9db27dbea5d7a8 165 Pfam PF03938 Outer membrane protein (OmpH-like) 11 163 2.8E-37 T 15-10-2018 IPR005632 Chaperone protein Skp GO:0051082 AM378_14275 0fa2ceadada01e429b9db27dbea5d7a8 165 SMART SM00935 12 165 2.1E-56 T 15-10-2018 IPR005632 Chaperone protein Skp GO:0051082 AM378_14275 0fa2ceadada01e429b9db27dbea5d7a8 165 SUPERFAMILY SSF111384 22 164 9.68E-40 T 15-10-2018 AM378_14275 0fa2ceadada01e429b9db27dbea5d7a8 165 PIRSF PIRSF002094 1 165 2.1E-62 T 15-10-2018 IPR005632 Chaperone protein Skp GO:0051082 AM378_14275 0fa2ceadada01e429b9db27dbea5d7a8 165 Gene3D G3DSA:3.30.910.20 21 165 2.0E-49 T 15-10-2018 IPR024930 Skp domain superfamily AM378_02665 517fa6179d9398a11ee71412c5e7dafd 355 Gene3D G3DSA:3.40.50.2300 40 306 8.1E-70 T 15-10-2018 AM378_02665 517fa6179d9398a11ee71412c5e7dafd 355 Gene3D G3DSA:3.40.50.2300 141 311 8.1E-70 T 15-10-2018 AM378_02665 517fa6179d9398a11ee71412c5e7dafd 355 Pfam PF13407 Periplasmic binding protein domain 50 298 2.0E-29 T 15-10-2018 IPR025997 Periplasmic binding protein AM378_02665 517fa6179d9398a11ee71412c5e7dafd 355 SUPERFAMILY SSF53822 38 311 2.55E-41 T 15-10-2018 IPR028082 Periplasmic binding protein-like I AM378_24025 591f1ea00fa7b307d921d23c88d0ebd5 172 Pfam PF13673 Acetyltransferase (GNAT) domain 41 141 9.1E-13 T 15-10-2018 IPR000182 GNAT domain AM378_24025 591f1ea00fa7b307d921d23c88d0ebd5 172 SUPERFAMILY SSF55729 1 140 1.7E-22 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase AM378_24025 591f1ea00fa7b307d921d23c88d0ebd5 172 Gene3D G3DSA:3.40.630.30 1 152 5.8E-23 T 15-10-2018 AM378_19680 e5536d67a4cc3c41917daec181a2bd6d 86 SUPERFAMILY SSF47598 3 45 8.15E-10 T 15-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 AM378_19680 e5536d67a4cc3c41917daec181a2bd6d 86 Pfam PF01402 Ribbon-helix-helix protein, copG family 6 43 2.1E-11 T 15-10-2018 IPR002145 Ribbon-helix-helix protein, CopG GO:0006355 AM378_10205 9d1f7034e8a16b5541387385ed0451c7 727 Pfam PF11308 Glycosyl hydrolases related to GH101 family, GH129 366 689 1.5E-151 T 15-10-2018 IPR021459 Glycosyl hydrolases related to GH101 family, GHL1-GHL3 AM378_09745 2c594bc3709f5db06bcfd449c8c993b3 144 Pfam PF05130 FlgN protein 1 133 2.3E-24 T 15-10-2018 IPR007809 FlgN-like protein GO:0005515|GO:0044780 AM378_09745 2c594bc3709f5db06bcfd449c8c993b3 144 Gene3D G3DSA:1.20.58.300 2 119 1.8E-11 T 15-10-2018 AM378_09745 2c594bc3709f5db06bcfd449c8c993b3 144 SUPERFAMILY SSF140566 1 118 6.15E-17 T 15-10-2018 IPR036679 FlgN-like superfamily GO:0005515|GO:0044780 AM378_05895 da0ebcbb788b747d6cc64bb53fef7670 373 Gene3D G3DSA:3.30.420.40 145 327 8.5E-131 T 15-10-2018 AM378_05895 da0ebcbb788b747d6cc64bb53fef7670 373 Pfam PF03702 Anhydro-N-acetylmuramic acid kinase 5 366 2.7E-165 T 15-10-2018 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 MetaCyc: PWY-7883 AM378_05895 da0ebcbb788b747d6cc64bb53fef7670 373 Gene3D G3DSA:3.30.420.40 11 362 8.5E-131 T 15-10-2018 AM378_05895 da0ebcbb788b747d6cc64bb53fef7670 373 Hamap MF_01270 Anhydro-N-acetylmuramic acid kinase [anmK]. 4 367 41.568 T 15-10-2018 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 MetaCyc: PWY-7883 AM378_05895 da0ebcbb788b747d6cc64bb53fef7670 373 SUPERFAMILY SSF53067 5 340 2.59E-26 T 15-10-2018 AM378_02390 c5c076a2d0707db668967261bfc8a087 258 Gene3D G3DSA:3.90.420.10 81 257 1.4E-47 T 15-10-2018 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily GO:0042128 Reactome: R-HSA-1614517 AM378_02390 c5c076a2d0707db668967261bfc8a087 258 SUPERFAMILY SSF56524 56 257 8.76E-62 T 15-10-2018 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily GO:0042128 Reactome: R-HSA-1614517 AM378_02390 c5c076a2d0707db668967261bfc8a087 258 Pfam PF00174 Oxidoreductase molybdopterin binding domain 104 247 5.7E-31 T 15-10-2018 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 AM378_16190 b03b9ba14338f5998f579b53c5a61cd9 170 Gene3D G3DSA:1.10.530.40 27 169 2.5E-46 T 15-10-2018 AM378_16190 b03b9ba14338f5998f579b53c5a61cd9 170 SUPERFAMILY SSF53955 10 168 7.67E-54 T 15-10-2018 IPR023346 Lysozyme-like domain superfamily AM378_16190 b03b9ba14338f5998f579b53c5a61cd9 170 Pfam PF00959 Phage lysozyme 53 158 8.1E-15 T 15-10-2018 IPR002196 Glycoside hydrolase, family 24 GO:0003796|GO:0009253|GO:0016998 AM378_15140 e969dbc797ffde22eaa1001f187cb81b 286 Gene3D G3DSA:3.20.20.150 1 285 6.0E-80 T 15-10-2018 AM378_15140 e969dbc797ffde22eaa1001f187cb81b 286 Pfam PF01261 Xylose isomerase-like TIM barrel 23 234 3.5E-36 T 15-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain AM378_15140 e969dbc797ffde22eaa1001f187cb81b 286 SUPERFAMILY SSF51658 11 278 1.83E-57 T 15-10-2018 IPR036237 Xylose isomerase-like superfamily AM378_15140 e969dbc797ffde22eaa1001f187cb81b 286 TIGRFAM TIGR00542 hxl6Piso_put: putative hexulose-6-phosphate isomerase 2 286 4.6E-147 T 15-10-2018 IPR004560 L-ribulose-5-phosphate 3-epimerase GO:0005975|GO:0016861 KEGG: 00040+5.1.3.22|KEGG: 00053+5.1.3.22|MetaCyc: PWY-6961 AM378_11365 b5aa585c2b70533a401d64d23de9da61 386 Pfam PF03264 NapC/NirT cytochrome c family, N-terminal region 11 182 3.5E-68 T 15-10-2018 IPR005126 NapC/NirT cytochrome c, N-terminal AM378_11365 b5aa585c2b70533a401d64d23de9da61 386 SUPERFAMILY SSF48695 14 184 4.32E-50 T 15-10-2018 IPR036280 Multiheme cytochrome superfamily AM378_11365 b5aa585c2b70533a401d64d23de9da61 386 SUPERFAMILY SSF46626 323 374 8.48E-5 T 15-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM378_11365 b5aa585c2b70533a401d64d23de9da61 386 Gene3D G3DSA:1.10.3820.10 7 187 7.8E-39 T 15-10-2018 IPR038266 NapC/NirT cytochrome c superfamily AM378_11365 b5aa585c2b70533a401d64d23de9da61 386 PIRSF PIRSF000014 2 382 1.4E-144 T 15-10-2018 IPR009154 Membrane-bound tetrahaem cytochrome TorC/YecK GO:0005506|GO:0009055|GO:0009276|GO:0016021|GO:0020037 AM378_14565 0ad5c03a08fabf3c2e3f27138dbaabca 114 Pfam PF05973 Phage derived protein Gp49-like (DUF891) 12 104 2.4E-23 T 15-10-2018 IPR009241 Toxin HigB-like AM378_21505 0ffb959dc8d4aa59c45a8ccdc7e9ca4b 262 SMART SM00382 36 234 9.9E-15 T 15-10-2018 IPR003593 AAA+ ATPase domain AM378_21505 0ffb959dc8d4aa59c45a8ccdc7e9ca4b 262 SUPERFAMILY SSF52540 5 259 5.12E-56 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_21505 0ffb959dc8d4aa59c45a8ccdc7e9ca4b 262 Pfam PF00005 ABC transporter 28 184 1.1E-29 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM378_21505 0ffb959dc8d4aa59c45a8ccdc7e9ca4b 262 TIGRFAM TIGR02323 CP_lyasePhnK: phosphonate C-P lyase system protein PhnK 10 261 1.4E-119 T 15-10-2018 IPR012700 Phosphonate C-P lyase system, PhnK AM378_21505 0ffb959dc8d4aa59c45a8ccdc7e9ca4b 262 ProSitePatterns PS00211 ABC transporters family signature. 157 171 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM378_21505 0ffb959dc8d4aa59c45a8ccdc7e9ca4b 262 Gene3D G3DSA:3.40.50.300 9 262 2.3E-66 T 15-10-2018 AM378_21505 0ffb959dc8d4aa59c45a8ccdc7e9ca4b 262 PIRSF PIRSF037116 2 262 2.6E-141 T 15-10-2018 IPR012700 Phosphonate C-P lyase system, PhnK AM378_20990 98017abe60265bc617e7f811ddcc540c 181 SMART SM00479 7 180 1.5E-21 T 15-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III AM378_20990 98017abe60265bc617e7f811ddcc540c 181 Hamap MF_00045 Oligoribonuclease [orn]. 3 181 44.717 T 15-10-2018 IPR022894 Oligoribonuclease GO:0000175 AM378_20990 98017abe60265bc617e7f811ddcc540c 181 SUPERFAMILY SSF53098 4 180 2.7E-48 T 15-10-2018 IPR012337 Ribonuclease H-like superfamily AM378_20990 98017abe60265bc617e7f811ddcc540c 181 Pfam PF00929 Exonuclease 9 170 4.9E-37 T 15-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III AM378_20990 98017abe60265bc617e7f811ddcc540c 181 Gene3D G3DSA:3.30.420.10 1 181 1.7E-70 T 15-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AM378_15290 496505056c529498b0778cfdc7f07d55 347 Gene3D G3DSA:2.102.10.10 21 152 9.2E-32 T 15-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 AM378_15290 496505056c529498b0778cfdc7f07d55 347 Pfam PF00355 Rieske [2Fe-2S] domain 24 104 2.0E-18 T 15-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 AM378_15290 496505056c529498b0778cfdc7f07d55 347 SUPERFAMILY SSF50022 5 130 7.59E-32 T 15-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 AM378_15290 496505056c529498b0778cfdc7f07d55 347 SUPERFAMILY SSF55961 137 337 1.33E-48 T 15-10-2018 AM378_11740 224678b1c366189a70dbeb35341793df 485 Pfam PF00361 Proton-conducting membrane transporter 122 420 1.8E-83 T 15-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM378_11740 224678b1c366189a70dbeb35341793df 485 TIGRFAM TIGR01770 NDH_I_N: proton-translocating NADH-quinone oxidoreductase, chain N 9 475 1.1E-134 T 15-10-2018 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 AM378_11740 224678b1c366189a70dbeb35341793df 485 Hamap MF_00445 NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic [ndhB]. 6 475 17.567 T 15-10-2018 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 AM378_22085 e01659cd883487088f438a496d4b9b9d 497 Gene3D G3DSA:1.20.1740.10 11 468 7.8E-48 T 15-10-2018 AM378_22085 e01659cd883487088f438a496d4b9b9d 497 PIRSF PIRSF006060 2 489 4.6E-66 T 15-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 AM378_22085 e01659cd883487088f438a496d4b9b9d 497 Pfam PF13520 Amino acid permease 17 437 2.6E-36 T 15-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 AM378_01580 8b4acf337cfda75aa6dc010322bf2f60 335 SUPERFAMILY SSF81345 5 332 6.54E-73 T 15-10-2018 IPR037294 ABC transporter, BtuC-like AM378_01580 8b4acf337cfda75aa6dc010322bf2f60 335 Pfam PF01032 FecCD transport family 21 332 3.4E-81 T 15-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 AM378_01580 8b4acf337cfda75aa6dc010322bf2f60 335 Gene3D G3DSA:1.10.3470.10 5 335 6.2E-85 T 15-10-2018 IPR037294 ABC transporter, BtuC-like AM378_13660 c3c33afbc363be436374aaa944853d70 127 TIGRFAM TIGR04365 spare_glycyl: autonomous glycyl radical cofactor GrcA 2 127 8.6E-74 T 15-10-2018 IPR011140 Autonomous glycyl radical cofactor GrcA AM378_13660 c3c33afbc363be436374aaa944853d70 127 ProSitePatterns PS00850 Glycine radical domain signature. 97 105 - T 15-10-2018 IPR019777 Formate C-acetyltransferase glycine radical, conserved site AM378_13660 c3c33afbc363be436374aaa944853d70 127 SUPERFAMILY SSF51998 41 125 1.01E-24 T 15-10-2018 AM378_13660 c3c33afbc363be436374aaa944853d70 127 PIRSF PIRSF000378 2 127 9.4E-56 T 15-10-2018 IPR011140 Autonomous glycyl radical cofactor GrcA AM378_13660 c3c33afbc363be436374aaa944853d70 127 Gene3D G3DSA:3.20.70.20 59 127 7.2E-26 T 15-10-2018 AM378_13660 c3c33afbc363be436374aaa944853d70 127 Pfam PF01228 Glycine radical 13 108 2.1E-24 T 15-10-2018 IPR001150 Glycine radical domain GO:0003824 AM378_13660 c3c33afbc363be436374aaa944853d70 127 Hamap MF_00806 Autonomous glycyl radical cofactor [grcA]. 1 127 43.345 T 15-10-2018 IPR011140 Autonomous glycyl radical cofactor GrcA AM378_03570 89528795833e0b0a8529fc448c9446e6 602 SUPERFAMILY SSF47090 298 341 5.41E-9 T 15-10-2018 IPR036365 PGBD-like superfamily AM378_03570 89528795833e0b0a8529fc448c9446e6 602 SUPERFAMILY SSF141523 361 520 1.19E-19 T 15-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like AM378_03570 89528795833e0b0a8529fc448c9446e6 602 Pfam PF03734 L,D-transpeptidase catalytic domain 363 530 1.1E-28 T 15-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 AM378_03570 89528795833e0b0a8529fc448c9446e6 602 Pfam PF01471 Putative peptidoglycan binding domain 300 334 2.4E-5 T 15-10-2018 IPR002477 Peptidoglycan binding-like AM378_03260 81aef2d0ebb4761d41001e9a61c79b9c 222 SUPERFAMILY SSF161098 6 200 2.62E-29 T 15-10-2018 IPR035906 MetI-like superfamily AM378_03260 81aef2d0ebb4761d41001e9a61c79b9c 222 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 5 110 1.6E-16 T 15-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 AM378_03260 81aef2d0ebb4761d41001e9a61c79b9c 222 Gene3D G3DSA:1.10.3720.10 1 216 7.5E-41 T 15-10-2018 IPR035906 MetI-like superfamily AM378_03260 81aef2d0ebb4761d41001e9a61c79b9c 222 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 33 215 1.4E-13 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AM378_06235 8fccb6985cb0f7f7c4ec06b77a9286e8 173 SUPERFAMILY SSF55729 11 160 2.38E-29 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase AM378_06235 8fccb6985cb0f7f7c4ec06b77a9286e8 173 Pfam PF13302 Acetyltransferase (GNAT) domain 15 150 9.7E-21 T 15-10-2018 IPR000182 GNAT domain AM378_06235 8fccb6985cb0f7f7c4ec06b77a9286e8 173 Gene3D G3DSA:3.40.630.30 4 169 2.6E-30 T 15-10-2018 AM378_15255 0465c33a84fb0063d14751f5baf668df 272 SUPERFAMILY SSF53474 8 266 5.45E-50 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold AM378_15255 0465c33a84fb0063d14751f5baf668df 272 Pfam PF12697 Alpha/beta hydrolase family 28 256 5.6E-18 T 15-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AM378_15255 0465c33a84fb0063d14751f5baf668df 272 PRINTS PR00111 Alpha/beta hydrolase fold signature 98 111 3.6E-7 T 15-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AM378_15255 0465c33a84fb0063d14751f5baf668df 272 PRINTS PR00111 Alpha/beta hydrolase fold signature 214 228 3.6E-7 T 15-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AM378_15255 0465c33a84fb0063d14751f5baf668df 272 PRINTS PR00111 Alpha/beta hydrolase fold signature 53 68 3.6E-7 T 15-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AM378_15255 0465c33a84fb0063d14751f5baf668df 272 PRINTS PR00111 Alpha/beta hydrolase fold signature 112 125 3.6E-7 T 15-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AM378_15255 0465c33a84fb0063d14751f5baf668df 272 Gene3D G3DSA:3.40.50.1820 13 268 2.7E-49 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold AM378_10690 9ef7a2d647ed2f41635224287df77942 247 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 19 227 4.7E-23 T 15-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AM378_10690 9ef7a2d647ed2f41635224287df77942 247 Gene3D G3DSA:3.40.190.10 103 195 1.2E-27 T 15-10-2018 AM378_10690 9ef7a2d647ed2f41635224287df77942 247 SUPERFAMILY SSF53850 18 231 1.0E-30 T 15-10-2018 AM378_10690 9ef7a2d647ed2f41635224287df77942 247 SMART SM00062 17 236 2.3E-23 T 15-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AM378_10690 9ef7a2d647ed2f41635224287df77942 247 Gene3D G3DSA:3.40.190.10 15 227 1.2E-27 T 15-10-2018 AM378_10270 ccde94593e3dd156bd3ca0d0299c16b1 310 Gene3D G3DSA:1.10.10.10 3 89 5.0E-27 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_10270 ccde94593e3dd156bd3ca0d0299c16b1 310 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 4.2E-9 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_10270 ccde94593e3dd156bd3ca0d0299c16b1 310 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 4.2E-9 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_10270 ccde94593e3dd156bd3ca0d0299c16b1 310 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 4.2E-9 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_10270 ccde94593e3dd156bd3ca0d0299c16b1 310 SUPERFAMILY SSF53850 89 293 5.07E-42 T 15-10-2018 AM378_10270 ccde94593e3dd156bd3ca0d0299c16b1 310 SUPERFAMILY SSF46785 4 109 2.72E-23 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM378_10270 ccde94593e3dd156bd3ca0d0299c16b1 310 Gene3D G3DSA:3.40.190.10 91 288 2.4E-60 T 15-10-2018 AM378_10270 ccde94593e3dd156bd3ca0d0299c16b1 310 Gene3D G3DSA:3.40.190.10 163 263 2.4E-60 T 15-10-2018 AM378_10270 ccde94593e3dd156bd3ca0d0299c16b1 310 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 62 2.2E-20 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_10270 ccde94593e3dd156bd3ca0d0299c16b1 310 Pfam PF03466 LysR substrate binding domain 88 292 1.6E-39 T 15-10-2018 IPR005119 LysR, substrate-binding AM378_15345 b85bf5ce464ca0f8781e8c5c98e3f83f 662 Pfam PF01032 FecCD transport family 19 324 3.1E-66 T 15-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 AM378_15345 b85bf5ce464ca0f8781e8c5c98e3f83f 662 Pfam PF01032 FecCD transport family 360 659 2.1E-70 T 15-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 AM378_15345 b85bf5ce464ca0f8781e8c5c98e3f83f 662 SUPERFAMILY SSF81345 9 326 1.44E-59 T 15-10-2018 IPR037294 ABC transporter, BtuC-like AM378_15345 b85bf5ce464ca0f8781e8c5c98e3f83f 662 SUPERFAMILY SSF81345 352 659 2.22E-67 T 15-10-2018 IPR037294 ABC transporter, BtuC-like AM378_15345 b85bf5ce464ca0f8781e8c5c98e3f83f 662 Gene3D G3DSA:1.10.3470.10 5 332 1.7E-70 T 15-10-2018 IPR037294 ABC transporter, BtuC-like AM378_15345 b85bf5ce464ca0f8781e8c5c98e3f83f 662 Gene3D G3DSA:1.10.3470.10 348 662 4.6E-74 T 15-10-2018 IPR037294 ABC transporter, BtuC-like AM378_12700 7e22989d720e4f70a8d53e3aae4c43e5 469 Pfam PF00324 Amino acid permease 19 457 4.0E-117 T 15-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 AM378_12700 7e22989d720e4f70a8d53e3aae4c43e5 469 Gene3D G3DSA:1.20.1740.10 10 467 3.6E-61 T 15-10-2018 AM378_12700 7e22989d720e4f70a8d53e3aae4c43e5 469 ProSitePatterns PS00218 Amino acid permeases signature. 44 75 - T 15-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 AM378_12700 7e22989d720e4f70a8d53e3aae4c43e5 469 PIRSF PIRSF006060 1 462 4.8E-79 T 15-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 AM378_21100 79b76e67c4d487dfdf959477d1947c66 102 Gene3D G3DSA:3.30.1660.10 34 102 2.3E-17 T 15-10-2018 IPR025543 Dodecin-like AM378_21100 79b76e67c4d487dfdf959477d1947c66 102 Pfam PF07338 Protein of unknown function (DUF1471) 47 102 3.6E-19 T 15-10-2018 IPR010854 Domain of unknown function DUF1471 AM378_21100 79b76e67c4d487dfdf959477d1947c66 102 SUPERFAMILY SSF159871 5 102 2.09E-19 T 15-10-2018 IPR036275 YdgH-like superfamily AM378_01475 d44bac9e555511d5cc63488651c5a8e9 488 ProSitePatterns PS00218 Amino acid permeases signature. 59 89 - T 15-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 AM378_01475 d44bac9e555511d5cc63488651c5a8e9 488 PIRSF PIRSF006060 22 487 8.7E-66 T 15-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 AM378_01475 d44bac9e555511d5cc63488651c5a8e9 488 Pfam PF00324 Amino acid permease 35 468 3.3E-126 T 15-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 AM378_01475 d44bac9e555511d5cc63488651c5a8e9 488 Gene3D G3DSA:1.20.1740.10 26 485 1.7E-63 T 15-10-2018 AM378_19660 2079d2b0477d0faf15ad46f8ba322583 216 Gene3D G3DSA:3.40.1000.10 67 216 3.9E-7 T 15-10-2018 IPR016123 Mog1/PsbP, alpha/beta/alpha sandwich AM378_19660 2079d2b0477d0faf15ad46f8ba322583 216 Pfam PF08786 DcrB 71 212 1.3E-7 T 15-10-2018 IPR014894 Protein DcrB AM378_14570 b4d6b3738c8599dd3b0bbab485465ba0 100 SUPERFAMILY SSF47413 25 94 6.19E-14 T 15-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AM378_14570 b4d6b3738c8599dd3b0bbab485465ba0 100 SMART SM00530 32 87 1.1E-8 T 15-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM378_14570 b4d6b3738c8599dd3b0bbab485465ba0 100 Gene3D G3DSA:1.10.260.40 17 95 7.6E-12 T 15-10-2018 AM378_14570 b4d6b3738c8599dd3b0bbab485465ba0 100 Pfam PF13744 Helix-turn-helix domain 18 89 9.2E-12 T 15-10-2018 IPR039554 HigA2-like, helix-turn-helix domain AM378_07820 1ea726a24ec7983f3667afb9802d2529 301 Gene3D G3DSA:1.10.10.10 1 83 6.0E-21 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_07820 1ea726a24ec7983f3667afb9802d2529 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 1.7E-13 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_07820 1ea726a24ec7983f3667afb9802d2529 301 SUPERFAMILY SSF46785 1 87 3.13E-17 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM378_07820 1ea726a24ec7983f3667afb9802d2529 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.4E-6 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_07820 1ea726a24ec7983f3667afb9802d2529 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.4E-6 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_07820 1ea726a24ec7983f3667afb9802d2529 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.4E-6 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_07820 1ea726a24ec7983f3667afb9802d2529 301 SUPERFAMILY SSF53850 88 298 1.81E-26 T 15-10-2018 AM378_07820 1ea726a24ec7983f3667afb9802d2529 301 Pfam PF03466 LysR substrate binding domain 87 296 9.9E-27 T 15-10-2018 IPR005119 LysR, substrate-binding AM378_07820 1ea726a24ec7983f3667afb9802d2529 301 Gene3D G3DSA:3.40.190.290 90 300 4.0E-26 T 15-10-2018 AM378_03815 b4d67adb9147561b8a217132093c386c 194 Gene3D G3DSA:2.60.40.1090 30 193 5.8E-23 T 15-10-2018 IPR036937 Fimbrial-type adhesion domain superfamily GO:0007155|GO:0009289 AM378_03815 b4d67adb9147561b8a217132093c386c 194 SUPERFAMILY SSF49401 31 193 3.08E-18 T 15-10-2018 IPR008966 Adhesion domain superfamily AM378_03815 b4d67adb9147561b8a217132093c386c 194 Pfam PF00419 Fimbrial protein 31 193 4.2E-11 T 15-10-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM378_16665 bfcea2b3266cf2260a1a042a02afcff3 148 SUPERFAMILY SSF55804 1 148 3.53E-42 T 15-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 AM378_16665 bfcea2b3266cf2260a1a042a02afcff3 148 TIGRFAM TIGR01419 nitro_reg_IIA: PTS IIA-like nitrogen-regulatory protein PtsN 2 148 7.0E-61 T 15-10-2018 IPR006320 Phosphotransferase system, IIA-like nitrogen-regulatory protein PtsN GO:0008982|GO:0009401 AM378_16665 bfcea2b3266cf2260a1a042a02afcff3 148 Gene3D G3DSA:3.40.930.10 1 148 8.3E-62 T 15-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 AM378_16665 bfcea2b3266cf2260a1a042a02afcff3 148 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 51 67 - T 15-10-2018 IPR002178 PTS EIIA type-2 domain AM378_16665 bfcea2b3266cf2260a1a042a02afcff3 148 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 6 147 8.7E-37 T 15-10-2018 IPR002178 PTS EIIA type-2 domain AM378_07675 32587b69aff04f13fb1ed6c28bb53a2c 132 SUPERFAMILY SSF54593 7 129 2.06E-22 T 15-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AM378_07675 32587b69aff04f13fb1ed6c28bb53a2c 132 Gene3D G3DSA:3.10.180.10 1 127 2.4E-38 T 15-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AM378_07675 32587b69aff04f13fb1ed6c28bb53a2c 132 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 7 123 8.6E-7 T 15-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AM378_17835 6d964bf6c93a0f2d49b7548ad26f7c6b 120 Pfam PF10748 Protein of unknown function (DUF2531) 10 94 5.0E-9 T 15-10-2018 IPR019684 HofP protein AM378_07485 6b7ecf175f475b80d03dfa6372d7360f 280 TIGRFAM TIGR00687 pyridox_kin: pyridoxal kinase 13 272 1.1E-43 T 15-10-2018 IPR004625 Pyridoxine kinase GO:0008478|GO:0009443 KEGG: 00750+2.7.1.35|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-6798695|Reactome: R-HSA-964975 AM378_07485 6b7ecf175f475b80d03dfa6372d7360f 280 SUPERFAMILY SSF53613 14 265 2.65E-53 T 15-10-2018 IPR029056 Ribokinase-like AM378_07485 6b7ecf175f475b80d03dfa6372d7360f 280 Pfam PF08543 Phosphomethylpyrimidine kinase 87 268 3.2E-21 T 15-10-2018 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-6798695|Reactome: R-HSA-964975 AM378_07485 6b7ecf175f475b80d03dfa6372d7360f 280 Gene3D G3DSA:3.40.1190.20 11 279 2.7E-62 T 15-10-2018 IPR029056 Ribokinase-like AM378_24375 9d9014bfc1a3fb3d41cb960fa1cbfb30 90 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 1.6E-20 T 15-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AM378_24375 9d9014bfc1a3fb3d41cb960fa1cbfb30 90 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 1.6E-20 T 15-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AM378_24375 9d9014bfc1a3fb3d41cb960fa1cbfb30 90 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 1.6E-20 T 15-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AM378_24375 9d9014bfc1a3fb3d41cb960fa1cbfb30 90 Pfam PF00216 Bacterial DNA-binding protein 1 90 2.0E-32 T 15-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AM378_24375 9d9014bfc1a3fb3d41cb960fa1cbfb30 90 SMART SM00411 1 90 2.5E-44 T 15-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AM378_24375 9d9014bfc1a3fb3d41cb960fa1cbfb30 90 SUPERFAMILY SSF47729 1 90 4.12E-32 T 15-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 AM378_24375 9d9014bfc1a3fb3d41cb960fa1cbfb30 90 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 15-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 AM378_24375 9d9014bfc1a3fb3d41cb960fa1cbfb30 90 Gene3D G3DSA:4.10.520.10 1 90 2.1E-36 T 15-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 AM378_05870 b81e11affa3ec83c44797d9a1ebafece 676 Pfam PF04632 Fusaric acid resistance protein family 20 663 8.8E-197 T 15-10-2018 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein GO:0005886|GO:0022857|GO:0055085 AM378_04465 96309d8fa2b960c917705ea32d64eedb 152 SMART SM01321 11 129 1.4E-41 T 15-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 AM378_04465 96309d8fa2b960c917705ea32d64eedb 152 Gene3D G3DSA:3.30.70.1290 3 135 3.1E-42 T 15-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 AM378_04465 96309d8fa2b960c917705ea32d64eedb 152 SUPERFAMILY SSF143422 1 129 1.07E-47 T 15-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 AM378_04465 96309d8fa2b960c917705ea32d64eedb 152 Pfam PF01797 Transposase IS200 like 12 129 1.8E-37 T 15-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 AM378_18830 023bb2f6118d29572a019a84cd1d87d2 223 Pfam PF11769 Protein of unknown function (DUF3313) 18 215 2.2E-53 T 15-10-2018 IPR021747 Protein of unknown function DUF3313 AM378_14945 67e610e3894e95a343a8fe55e5571e9b 328 Pfam PF02653 Branched-chain amino acid transport system / permease component 41 311 5.2E-38 T 15-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 AM378_06345 2ebe8d2997665e98ec8e135b9b59c456 180 SUPERFAMILY SSF54292 24 97 9.31E-21 T 15-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 AM378_06345 2ebe8d2997665e98ec8e135b9b59c456 180 Gene3D G3DSA:3.10.20.30 17 93 6.5E-25 T 15-10-2018 IPR012675 Beta-grasp domain superfamily AM378_06345 2ebe8d2997665e98ec8e135b9b59c456 180 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 58 66 - T 15-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 AM378_06345 2ebe8d2997665e98ec8e135b9b59c456 180 SUPERFAMILY SSF47741 103 169 1.57E-29 T 15-10-2018 IPR036884 [2Fe-2S]-binding domain superfamily AM378_06345 2ebe8d2997665e98ec8e135b9b59c456 180 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 26 71 2.4E-5 T 15-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AM378_06345 2ebe8d2997665e98ec8e135b9b59c456 180 Gene3D G3DSA:1.10.150.120 94 179 1.6E-28 T 15-10-2018 AM378_06345 2ebe8d2997665e98ec8e135b9b59c456 180 Pfam PF01799 [2Fe-2S] binding domain 92 164 8.2E-29 T 15-10-2018 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 AM378_04275 ba258c858a2a28136f453393a4a92e8d 84 ProDom PD060858 YCEP CYTOPLASMIC STY1199 ESCHERICHIA COLI SIMILAR ECS1438 1 84 4.0E-36 T 15-10-2018 IPR025730 Biofilm regulator BssS AM378_04275 ba258c858a2a28136f453393a4a92e8d 84 Pfam PF13991 BssS protein family 11 80 5.8E-38 T 15-10-2018 IPR025730 Biofilm regulator BssS AM378_07720 9344537ec4aeaef0cb9cd8aa0df65cc3 167 ProSitePatterns PS01265 Tpx family signature. 84 95 - T 15-10-2018 IPR018219 Thiol peroxidase conserved site GO:0016684|GO:0055114 KEGG: 00480+1.11.1.15 AM378_07720 9344537ec4aeaef0cb9cd8aa0df65cc3 167 Pfam PF08534 Redoxin 20 163 3.2E-26 T 15-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 AM378_07720 9344537ec4aeaef0cb9cd8aa0df65cc3 167 Hamap MF_00269 Thiol peroxidase [tpx]. 4 167 39.774 T 15-10-2018 IPR002065 Thiol peroxidase Tpx GO:0008379|GO:0016209|GO:0055114 KEGG: 00480+1.11.1.15 AM378_07720 9344537ec4aeaef0cb9cd8aa0df65cc3 167 SUPERFAMILY SSF52833 4 164 6.26E-41 T 15-10-2018 IPR036249 Thioredoxin-like superfamily AM378_07720 9344537ec4aeaef0cb9cd8aa0df65cc3 167 Gene3D G3DSA:3.40.30.10 1 167 3.6E-46 T 15-10-2018 AM378_03850 46b018e829174a15178768ba223bce07 142 Pfam PF07681 DoxX 14 95 3.8E-14 T 15-10-2018 IPR032808 DoxX family AM378_18315 df148d59d2b5a448758f09bd66c93826 584 Gene3D G3DSA:3.40.50.720 401 562 6.0E-34 T 15-10-2018 AM378_18315 df148d59d2b5a448758f09bd66c93826 584 Pfam PF02254 TrkA-N domain 405 518 4.5E-24 T 15-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 AM378_18315 df148d59d2b5a448758f09bd66c93826 584 Gene3D G3DSA:1.20.1530.20 4 388 1.6E-82 T 15-10-2018 IPR038770 Sodium/solute symporter superfamily AM378_18315 df148d59d2b5a448758f09bd66c93826 584 TIGRFAM TIGR00932 2a37: transporter, monovalent cation:proton antiporter-2 (CPA2) family 16 288 2.3E-79 T 15-10-2018 IPR004771 K+/H+ exchanger GO:0006812|GO:0008324|GO:0016021 AM378_18315 df148d59d2b5a448758f09bd66c93826 584 Pfam PF00999 Sodium/hydrogen exchanger family 13 375 2.3E-68 T 15-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 AM378_18315 df148d59d2b5a448758f09bd66c93826 584 SUPERFAMILY SSF51735 404 532 3.01E-31 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily AM378_16970 d0d7465e34951a6c21ee4ae5b36f37cd 295 SUPERFAMILY SSF46785 2 86 3.89E-23 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM378_16970 d0d7465e34951a6c21ee4ae5b36f37cd 295 Gene3D G3DSA:3.40.190.290 92 291 1.7E-50 T 15-10-2018 AM378_16970 d0d7465e34951a6c21ee4ae5b36f37cd 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.3E-7 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_16970 d0d7465e34951a6c21ee4ae5b36f37cd 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.3E-7 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_16970 d0d7465e34951a6c21ee4ae5b36f37cd 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.3E-7 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_16970 d0d7465e34951a6c21ee4ae5b36f37cd 295 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 5.4E-22 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_16970 d0d7465e34951a6c21ee4ae5b36f37cd 295 Pfam PF03466 LysR substrate binding domain 89 290 1.4E-44 T 15-10-2018 IPR005119 LysR, substrate-binding AM378_16970 d0d7465e34951a6c21ee4ae5b36f37cd 295 Gene3D G3DSA:1.10.10.10 1 91 3.4E-27 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_16970 d0d7465e34951a6c21ee4ae5b36f37cd 295 SUPERFAMILY SSF53850 90 293 4.05E-43 T 15-10-2018 AM378_03540 2d992924bd4d6d282d14a472ee6e5cd6 298 Gene3D G3DSA:3.90.1200.10 106 292 1.8E-7 T 15-10-2018 AM378_03540 2d992924bd4d6d282d14a472ee6e5cd6 298 SUPERFAMILY SSF56112 11 268 4.34E-19 T 15-10-2018 IPR011009 Protein kinase-like domain superfamily AM378_03540 2d992924bd4d6d282d14a472ee6e5cd6 298 Pfam PF01636 Phosphotransferase enzyme family 62 243 6.8E-7 T 15-10-2018 IPR002575 Aminoglycoside phosphotransferase AM378_13410 41309ff99d774379fcc83816a566ed82 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 208 232 1.3E-59 T 15-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AM378_13410 41309ff99d774379fcc83816a566ed82 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 60 76 1.3E-59 T 15-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AM378_13410 41309ff99d774379fcc83816a566ed82 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 81 97 1.3E-59 T 15-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AM378_13410 41309ff99d774379fcc83816a566ed82 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 130 153 1.3E-59 T 15-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AM378_13410 41309ff99d774379fcc83816a566ed82 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 38 58 1.3E-59 T 15-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AM378_13410 41309ff99d774379fcc83816a566ed82 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 177 198 1.3E-59 T 15-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AM378_13410 41309ff99d774379fcc83816a566ed82 267 SUPERFAMILY SSF56655 1 259 5.37E-85 T 15-10-2018 AM378_13410 41309ff99d774379fcc83816a566ed82 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 156 182 2.0E-36 T 15-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 AM378_13410 41309ff99d774379fcc83816a566ed82 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 17 39 2.0E-36 T 15-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 AM378_13410 41309ff99d774379fcc83816a566ed82 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 198 210 2.0E-36 T 15-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 AM378_13410 41309ff99d774379fcc83816a566ed82 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 104 123 2.0E-36 T 15-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 AM378_13410 41309ff99d774379fcc83816a566ed82 267 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 81 94 - T 15-10-2018 IPR020583 Inositol monophosphatase, metal-binding site AM378_13410 41309ff99d774379fcc83816a566ed82 267 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 211 225 - T 15-10-2018 IPR020550 Inositol monophosphatase, conserved site GO:0046854 AM378_13410 41309ff99d774379fcc83816a566ed82 267 Gene3D G3DSA:3.40.190.80 142 267 7.4E-42 T 15-10-2018 AM378_13410 41309ff99d774379fcc83816a566ed82 267 Gene3D G3DSA:3.30.540.10 1 140 7.5E-52 T 15-10-2018 AM378_13410 41309ff99d774379fcc83816a566ed82 267 Pfam PF00459 Inositol monophosphatase family 2 261 2.6E-72 T 15-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AM378_17390 181b0384cfca5a025e52261172136a56 68 Pfam PF03889 Domain of unknown function 9 45 4.3E-23 T 15-10-2018 IPR005589 Alternative ribosome-rescue factor A GO:0072344 AM378_23150 e0485834a5071817aad56df2fedb6e69 208 SUPERFAMILY SSF53335 4 204 3.07E-48 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM378_23150 e0485834a5071817aad56df2fedb6e69 208 ProSitePatterns PS01279 Protein-L-isoaspartate(D-aspartate) O-methyltransferase signature. 130 145 - T 15-10-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 AM378_23150 e0485834a5071817aad56df2fedb6e69 208 Hamap MF_00090 Protein-L-isoaspartate O-methyltransferase [pcm]. 1 208 39.028 T 15-10-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 AM378_23150 e0485834a5071817aad56df2fedb6e69 208 TIGRFAM TIGR00080 pimt: protein-L-isoaspartate O-methyltransferase 1 207 5.3E-91 T 15-10-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 AM378_23150 e0485834a5071817aad56df2fedb6e69 208 Gene3D G3DSA:3.40.50.150 1 207 3.4E-79 T 15-10-2018 AM378_23150 e0485834a5071817aad56df2fedb6e69 208 Pfam PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 6 206 6.5E-77 T 15-10-2018 AM378_00245 61f9f0da822294f6387f4ff73d4f7dd9 126 Pfam PF04304 Protein of unknown function (DUF454) 4 116 4.8E-41 T 15-10-2018 IPR007401 Protein of unknown function DUF454 AM378_00245 61f9f0da822294f6387f4ff73d4f7dd9 126 PIRSF PIRSF016789 2 123 1.1E-48 T 15-10-2018 IPR007401 Protein of unknown function DUF454 AM378_07575 da71593f05c5d6e06de10d9cda206eb6 241 SUPERFAMILY SSF52172 1 183 9.4E-31 T 15-10-2018 IPR011006 CheY-like superfamily AM378_07575 da71593f05c5d6e06de10d9cda206eb6 241 Pfam PF00072 Response regulator receiver domain 4 112 7.2E-19 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM378_07575 da71593f05c5d6e06de10d9cda206eb6 241 Pfam PF00486 Transcriptional regulatory protein, C terminal 156 231 5.3E-20 T 15-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AM378_07575 da71593f05c5d6e06de10d9cda206eb6 241 SMART SM00862 155 231 9.1E-19 T 15-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AM378_07575 da71593f05c5d6e06de10d9cda206eb6 241 SMART SM00448 2 112 2.0E-30 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM378_07575 da71593f05c5d6e06de10d9cda206eb6 241 Gene3D G3DSA:3.40.50.2300 1 119 1.1E-26 T 15-10-2018 AM378_07575 da71593f05c5d6e06de10d9cda206eb6 241 Gene3D G3DSA:1.10.10.10 121 238 1.5E-37 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_20980 375f8f322661256b17e3fcebf98deef8 297 Hamap MF_00662 Phosphatidylserine decarboxylase proenzyme [psd]. 10 287 48.88 T 15-10-2018 IPR033178 Phosphatidylserine decarboxylase, prokaryotic type 1 GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669 AM378_20980 375f8f322661256b17e3fcebf98deef8 297 Pfam PF02666 Phosphatidylserine decarboxylase 63 284 1.8E-58 T 15-10-2018 IPR003817 Phosphatidylserine decarboxylase-related GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 AM378_20980 375f8f322661256b17e3fcebf98deef8 297 TIGRFAM TIGR00163 PS_decarb: phosphatidylserine decarboxylase 49 284 3.4E-92 T 15-10-2018 IPR033177 Phosphatidylserine decarboxylase GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 AM378_02140 dddfc5472e97ff50a96c9da546cd9c5d 296 Pfam PF13714 Phosphoenolpyruvate phosphomutase 10 253 1.3E-49 T 15-10-2018 AM378_02140 dddfc5472e97ff50a96c9da546cd9c5d 296 SUPERFAMILY SSF51621 4 290 1.21E-97 T 15-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 AM378_02140 dddfc5472e97ff50a96c9da546cd9c5d 296 ProSitePatterns PS00161 Isocitrate lyase signature. 121 126 - T 15-10-2018 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site GO:0003824 AM378_02140 dddfc5472e97ff50a96c9da546cd9c5d 296 Hamap MF_01939 2-methylisocitrate lyase [prpB]. 4 292 50.166 T 15-10-2018 IPR012695 2-methylisocitrate lyase GO:0019629|GO:0046421 KEGG: 00640+4.1.3.30|MetaCyc: PWY-5747 AM378_02140 dddfc5472e97ff50a96c9da546cd9c5d 296 Gene3D G3DSA:3.20.20.60 3 296 1.4E-105 T 15-10-2018 AM378_02140 dddfc5472e97ff50a96c9da546cd9c5d 296 TIGRFAM TIGR02317 prpB: methylisocitrate lyase 7 291 4.2E-131 T 15-10-2018 IPR012695 2-methylisocitrate lyase GO:0019629|GO:0046421 KEGG: 00640+4.1.3.30|MetaCyc: PWY-5747 AM378_09145 abac663f53fb8cf8120104fb910392ec 351 SUPERFAMILY SSF53756 5 349 3.05E-73 T 15-10-2018 AM378_09145 abac663f53fb8cf8120104fb910392ec 351 Pfam PF13439 Glycosyltransferase Family 4 17 163 1.4E-11 T 15-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 AM378_09145 abac663f53fb8cf8120104fb910392ec 351 Pfam PF00534 Glycosyl transferases group 1 176 330 3.2E-39 T 15-10-2018 IPR001296 Glycosyl transferase, family 1 AM378_09145 abac663f53fb8cf8120104fb910392ec 351 Gene3D G3DSA:3.40.50.2000 165 337 6.1E-61 T 15-10-2018 AM378_09145 abac663f53fb8cf8120104fb910392ec 351 Gene3D G3DSA:3.40.50.2000 17 347 6.1E-61 T 15-10-2018 AM378_02950 e3ef40f18c4e43f16948619443e1c908 281 Pfam PF00795 Carbon-nitrogen hydrolase 18 259 1.4E-42 T 15-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 AM378_02950 e3ef40f18c4e43f16948619443e1c908 281 ProSitePatterns PS01227 Uncharacterized protein family UPF0012 signature. 156 176 - T 15-10-2018 IPR001110 Uncharacterised protein family UPF0012, conserved site AM378_02950 e3ef40f18c4e43f16948619443e1c908 281 SUPERFAMILY SSF56317 15 261 6.8E-64 T 15-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily AM378_02950 e3ef40f18c4e43f16948619443e1c908 281 Gene3D G3DSA:3.60.110.10 14 281 1.5E-72 T 15-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily AM378_05105 250c4249656899bb0f6a85b3082449db 214 SUPERFAMILY SSF141571 28 212 2.68E-38 T 15-10-2018 AM378_05105 250c4249656899bb0f6a85b3082449db 214 Gene3D G3DSA:2.160.20.80 1 214 1.5E-75 T 15-10-2018 AM378_05105 250c4249656899bb0f6a85b3082449db 214 Pfam PF00805 Pentapeptide repeats (8 copies) 53 79 1.8E-4 T 15-10-2018 IPR001646 Pentapeptide repeat AM378_05105 250c4249656899bb0f6a85b3082449db 214 Pfam PF00805 Pentapeptide repeats (8 copies) 28 45 0.0012 T 15-10-2018 IPR001646 Pentapeptide repeat AM378_05105 250c4249656899bb0f6a85b3082449db 214 Pfam PF13599 Pentapeptide repeats (9 copies) 94 170 1.3E-14 T 15-10-2018 IPR001646 Pentapeptide repeat AM378_22975 95566782f984a1e51dd2a90159fc29d1 233 Pfam PF01048 Phosphorylase superfamily 2 225 5.8E-48 T 15-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 AM378_22975 95566782f984a1e51dd2a90159fc29d1 233 TIGRFAM TIGR01704 MTA/SAH-Nsdase: MTA/SAH nucleosidase 2 228 3.4E-114 T 15-10-2018 IPR010049 MTA/SAH nucleosidase GO:0008782|GO:0008930|GO:0009164|GO:0019509 KEGG: 00270+3.2.2.9|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 AM378_22975 95566782f984a1e51dd2a90159fc29d1 233 Hamap MF_01684 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase [mtnN]. 2 229 46.826 T 15-10-2018 IPR010049 MTA/SAH nucleosidase GO:0008782|GO:0008930|GO:0009164|GO:0019509 KEGG: 00270+3.2.2.9|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 AM378_22975 95566782f984a1e51dd2a90159fc29d1 233 Gene3D G3DSA:3.40.50.1580 1 232 8.3E-71 T 15-10-2018 AM378_22975 95566782f984a1e51dd2a90159fc29d1 233 SUPERFAMILY SSF53167 1 229 1.83E-74 T 15-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 AM378_14995 bd9628d6911c391a6f7fcd350775fd66 107 Gene3D G3DSA:3.10.450.530 1 94 1.8E-14 T 15-10-2018 IPR038573 Ribonuclease toxin BrnT superfamily AM378_14995 bd9628d6911c391a6f7fcd350775fd66 107 Pfam PF04365 Ribonuclease toxin, BrnT, of type II toxin-antitoxin system 7 92 5.6E-23 T 15-10-2018 IPR007460 Ribonuclease toxin, BrnT, of type II toxin-antitoxin system AM378_17095 05042592c5866e8788c3f588e84f5225 69 Gene3D G3DSA:1.10.1470.10 1 69 5.5E-34 T 15-10-2018 IPR036629 YjbJ superfamily AM378_17095 05042592c5866e8788c3f588e84f5225 69 PIRSF PIRSF039008 1 66 2.6E-33 T 15-10-2018 IPR026042 Stress response protein YjbJ AM378_17095 05042592c5866e8788c3f588e84f5225 69 SUPERFAMILY SSF69047 1 69 1.31E-27 T 15-10-2018 IPR036629 YjbJ superfamily AM378_17095 05042592c5866e8788c3f588e84f5225 69 Pfam PF05532 CsbD-like 4 56 4.1E-23 T 15-10-2018 IPR008462 CsbD-like domain AM378_07120 c7970da1ef639df04f6084bb08d994cd 475 SUPERFAMILY SSF56954 3 456 3.01E-94 T 15-10-2018 AM378_07120 c7970da1ef639df04f6084bb08d994cd 475 Pfam PF02321 Outer membrane efflux protein 274 454 7.5E-28 T 15-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 AM378_07120 c7970da1ef639df04f6084bb08d994cd 475 Pfam PF02321 Outer membrane efflux protein 58 245 3.9E-21 T 15-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 AM378_07120 c7970da1ef639df04f6084bb08d994cd 475 Gene3D G3DSA:2.20.200.10 94 345 2.6E-119 T 15-10-2018 AM378_07120 c7970da1ef639df04f6084bb08d994cd 475 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 5 456 3.9E-112 T 15-10-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0016020|GO:0022857|GO:0055085 AM378_07120 c7970da1ef639df04f6084bb08d994cd 475 Gene3D G3DSA:1.20.1600.10 48 456 2.6E-119 T 15-10-2018 AM378_10730 e49783da70882b0ccfe0f984774488c5 97 ProDom PD065638 YGHW CYTOPLASMIC STY3323 1 91 3.0E-20 T 15-10-2018 IPR022574 Protein of unknown function DUF2623 AM378_10730 e49783da70882b0ccfe0f984774488c5 97 Pfam PF11115 Protein of unknown function (DUF2623) 3 93 6.9E-37 T 15-10-2018 IPR022574 Protein of unknown function DUF2623 AM378_08160 d1c9f2db1e35d1e39686ada32d645058 217 Pfam PF02677 Uncharacterized BCR, COG1636 18 192 1.1E-63 T 15-10-2018 IPR003828 Epoxyqueuosine reductase QueH MetaCyc: PWY-6700 AM378_08160 d1c9f2db1e35d1e39686ada32d645058 217 Hamap MF_02089 Epoxyqueuosine reductase QueH [queH]. 18 194 32.956 T 15-10-2018 IPR003828 Epoxyqueuosine reductase QueH MetaCyc: PWY-6700 AM378_01795 3117231adecd983128a1af33840a8978 85 SUPERFAMILY SSF159871 3 85 1.24E-24 T 15-10-2018 IPR036275 YdgH-like superfamily AM378_01795 3117231adecd983128a1af33840a8978 85 Pfam PF07338 Protein of unknown function (DUF1471) 33 85 2.5E-18 T 15-10-2018 IPR010854 Domain of unknown function DUF1471 AM378_01795 3117231adecd983128a1af33840a8978 85 Gene3D G3DSA:3.30.1660.10 21 85 1.4E-19 T 15-10-2018 IPR025543 Dodecin-like AM378_10485 99d4af9fdb1414c2f1e91e4193f3c822 178 Pfam PF00419 Fimbrial protein 34 178 4.8E-14 T 15-10-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM378_10485 99d4af9fdb1414c2f1e91e4193f3c822 178 Gene3D G3DSA:2.60.40.1090 28 177 2.8E-27 T 15-10-2018 IPR036937 Fimbrial-type adhesion domain superfamily GO:0007155|GO:0009289 AM378_10485 99d4af9fdb1414c2f1e91e4193f3c822 178 SUPERFAMILY SSF49401 35 178 6.96E-31 T 15-10-2018 IPR008966 Adhesion domain superfamily AM378_23755 2710d92ae782ea28a4737c78faf5590c 158 Pfam PF00419 Fimbrial protein 25 158 6.5E-16 T 15-10-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM378_23755 2710d92ae782ea28a4737c78faf5590c 158 Gene3D G3DSA:2.60.40.1090 35 158 3.0E-32 T 15-10-2018 IPR036937 Fimbrial-type adhesion domain superfamily GO:0007155|GO:0009289 AM378_23755 2710d92ae782ea28a4737c78faf5590c 158 SUPERFAMILY SSF49401 32 158 2.24E-22 T 15-10-2018 IPR008966 Adhesion domain superfamily AM378_15325 76df030939fb5956ad8b8024fd400470 60 Pfam PF10885 Protein of unknown function (DUF2684) 15 45 9.3E-10 T 15-10-2018 IPR020263 Uncharacterised protein family YqgD AM378_15325 76df030939fb5956ad8b8024fd400470 60 ProDom PD060540 YQGD INNER MEMBRANE ECS3817 1 55 1.0E-5 T 15-10-2018 IPR020263 Uncharacterised protein family YqgD AM378_10150 8654252c804a7ee30f2a8f2429658179 305 Pfam PF01062 Bestrophin, RFP-TM, chloride channel 2 283 1.8E-58 T 15-10-2018 IPR021134 Bestrophin/UPF0187 Reactome: R-HSA-2672351 AM378_02750 b9331034b67dcf0cc44d0858e424cb14 168 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 99 132 6.0E-10 T 15-10-2018 IPR001451 Hexapeptide repeat AM378_02750 b9331034b67dcf0cc44d0858e424cb14 168 SUPERFAMILY SSF51161 14 156 3.6E-36 T 15-10-2018 IPR011004 Trimeric LpxA-like superfamily AM378_02750 b9331034b67dcf0cc44d0858e424cb14 168 Gene3D G3DSA:2.160.10.10 3 162 1.9E-34 T 15-10-2018 AM378_07490 ee4ead557f566443e6fc34e1478ac27e 237 Hamap MF_01457 Flagellar brake protein YcgR [ycgR]. 4 235 25.004 T 15-10-2018 IPR023787 Type III secretion system flagellar brake protein YcgR GO:0035438|GO:0071945 AM378_07490 ee4ead557f566443e6fc34e1478ac27e 237 Gene3D G3DSA:2.40.10.220 110 237 5.3E-38 T 15-10-2018 AM378_07490 ee4ead557f566443e6fc34e1478ac27e 237 Pfam PF07238 PilZ domain 108 225 2.7E-9 T 15-10-2018 IPR009875 PilZ domain GO:0035438 AM378_07490 ee4ead557f566443e6fc34e1478ac27e 237 Pfam PF07317 Flagellar regulator YcgR 9 105 4.2E-16 T 15-10-2018 IPR009926 Type III secretion system flagellar brake protein YcgR, N-terminal AM378_06030 9f097b09ff6f40045e5bacbef065f4d2 193 Pfam PF02508 Rnf-Nqr subunit, membrane protein 5 190 2.2E-60 T 15-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 AM378_06030 9f097b09ff6f40045e5bacbef065f4d2 193 Hamap MF_00459 Ion-translocating oxidoreductase complex subunit A [rsxA]. 2 191 26.666 T 15-10-2018 IPR011293 Ion-translocating oxidoreductase complex, subunit RnfA/RsxA GO:0022900 AM378_06030 9f097b09ff6f40045e5bacbef065f4d2 193 PIRSF PIRSF006102 1 193 2.0E-61 T 15-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 AM378_06030 9f097b09ff6f40045e5bacbef065f4d2 193 TIGRFAM TIGR01943 rnfA: electron transport complex, RnfABCDGE type, A subunit 3 191 1.2E-90 T 15-10-2018 IPR011293 Ion-translocating oxidoreductase complex, subunit RnfA/RsxA GO:0022900 AM378_20015 45584bbfd9448606d20d9768c68c5fe9 355 Pfam PF16363 GDP-mannose 4,6 dehydratase 5 327 2.3E-98 T 15-10-2018 IPR016040 NAD(P)-binding domain AM378_20015 45584bbfd9448606d20d9768c68c5fe9 355 Gene3D G3DSA:3.90.25.10 202 335 7.0E-141 T 15-10-2018 AM378_20015 45584bbfd9448606d20d9768c68c5fe9 355 TIGRFAM TIGR01181 dTDP_gluc_dehyt: dTDP-glucose 4,6-dehydratase 3 341 2.4E-160 T 15-10-2018 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|KEGG: 00525+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688|MetaCyc: PWY-7814 AM378_20015 45584bbfd9448606d20d9768c68c5fe9 355 SUPERFAMILY SSF51735 2 339 1.51E-95 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily AM378_20015 45584bbfd9448606d20d9768c68c5fe9 355 Gene3D G3DSA:3.40.50.720 3 326 7.0E-141 T 15-10-2018 AM378_08650 abd33b506678d5ddb99eabc7c7f3f719 322 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 13 306 1.4E-91 T 15-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 AM378_08650 abd33b506678d5ddb99eabc7c7f3f719 322 Hamap MF_01944 Lipid A biosynthesis myristoyltransferase [lpxM]. 5 311 52.614 T 15-10-2018 IPR011921 Lipid A biosynthesis myristoyltransferase GO:0009103|GO:0009276|GO:0016021|GO:0016747 KEGG: 00540+2.3.1.243 AM378_08650 abd33b506678d5ddb99eabc7c7f3f719 322 PIRSF PIRSF026649 10 315 3.2E-94 T 15-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 AM378_08650 abd33b506678d5ddb99eabc7c7f3f719 322 TIGRFAM TIGR02208 lipid_A_msbB: lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase 11 315 1.6E-134 T 15-10-2018 IPR011921 Lipid A biosynthesis myristoyltransferase GO:0009103|GO:0009276|GO:0016021|GO:0016747 KEGG: 00540+2.3.1.243 AM378_17780 7855d5e52687d6155160e2e11b47d3f6 108 TIGRFAM TIGR02378 nirD_assim_sml: nitrite reductase [NAD(P)H], small subunit 3 107 2.3E-36 T 15-10-2018 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 AM378_17780 7855d5e52687d6155160e2e11b47d3f6 108 Gene3D G3DSA:2.102.10.10 1 108 4.4E-33 T 15-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 AM378_17780 7855d5e52687d6155160e2e11b47d3f6 108 Pfam PF13806 Rieske-like [2Fe-2S] domain 3 107 1.0E-39 T 15-10-2018 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 AM378_17780 7855d5e52687d6155160e2e11b47d3f6 108 SUPERFAMILY SSF50022 1 107 1.96E-36 T 15-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 AM378_18165 a7c722f51a0d290b06fcf18385c97b38 257 Pfam PF03649 Uncharacterised protein family (UPF0014) 10 245 1.8E-82 T 15-10-2018 IPR005226 UPF0014 family AM378_18165 a7c722f51a0d290b06fcf18385c97b38 257 TIGRFAM TIGR00245 TIGR00245: TIGR00245 family protein 6 251 1.6E-106 T 15-10-2018 IPR005226 UPF0014 family AM378_15995 8cb3024cba3d74aa8e373c6b8f796b69 220 Hamap MF_01188 UPF0441 protein YgiB [ygiB]. 1 220 37.749 T 15-10-2018 IPR009576 Biofilm formation YgiB AM378_15995 8cb3024cba3d74aa8e373c6b8f796b69 220 Pfam PF06693 Protein of unknown function (DUF1190) 41 205 2.7E-58 T 15-10-2018 IPR009576 Biofilm formation YgiB AM378_24260 7b5d81551a2de03389427d31f6040297 324 SUPERFAMILY SSF51430 1 320 1.57E-104 T 15-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily AM378_24260 7b5d81551a2de03389427d31f6040297 324 Pfam PF00248 Aldo/keto reductase family 15 313 1.1E-78 T 15-10-2018 IPR023210 NADP-dependent oxidoreductase domain AM378_24260 7b5d81551a2de03389427d31f6040297 324 Gene3D G3DSA:3.20.20.100 1 321 1.7E-119 T 15-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily AM378_15705 895d6cfad9f0036b9799d26e3d49cbbe 180 SUPERFAMILY SSF49401 34 179 4.42E-31 T 15-10-2018 IPR008966 Adhesion domain superfamily AM378_15705 895d6cfad9f0036b9799d26e3d49cbbe 180 Gene3D G3DSA:2.60.40.1090 45 179 5.2E-27 T 15-10-2018 IPR036937 Fimbrial-type adhesion domain superfamily GO:0007155|GO:0009289 AM378_09500 8df547d92b37ed1bf9f33faedf9490f6 281 Pfam PF03239 Iron permease FTR1 family 1 255 3.8E-71 T 15-10-2018 IPR004923 Iron permease FTR1/Fip1/EfeU GO:0005381|GO:0016020|GO:0033573|GO:0034755 AM378_09500 8df547d92b37ed1bf9f33faedf9490f6 281 TIGRFAM TIGR00145 TIGR00145: FTR1 family protein 1 261 6.5E-93 T 15-10-2018 IPR005217 Iron permease FTR1-like GO:0005381|GO:0005886|GO:0033573|GO:0034755 AM378_02205 d825627028644d9f8b448c4bf298b0ac 1000 Pfam PF13946 Domain of unknown function (DUF4214) 308 349 2.4E-5 T 15-10-2018 IPR025282 Domain of unknown function DUF4214 AM378_02205 d825627028644d9f8b448c4bf298b0ac 1000 Pfam PF13946 Domain of unknown function (DUF4214) 186 234 2.8E-5 T 15-10-2018 IPR025282 Domain of unknown function DUF4214 AM378_11480 d6d35f9b635683f60ca023c0da919fdd 335 Pfam PF04245 37-kD nucleoid-associated bacterial protein 10 324 1.3E-95 T 15-10-2018 IPR007358 Nucleoid-associated protein NdpA GO:0009295 AM378_11480 d6d35f9b635683f60ca023c0da919fdd 335 Hamap MF_00730 Nucleoid-associated protein YejK [yejK]. 3 330 45.555 T 15-10-2018 IPR007358 Nucleoid-associated protein NdpA GO:0009295 AM378_08330 0b92f34bf78adb0500742c20d8bf3b9e 154 Hamap MF_00612 UPF0225 protein YchJ [ychJ]. 1 130 28.355 T 15-10-2018 IPR023006 Uncharacterised protein family UPF0225 AM378_08330 0b92f34bf78adb0500742c20d8bf3b9e 154 Gene3D G3DSA:3.10.450.50 3 154 8.0E-55 T 15-10-2018 AM378_08330 0b92f34bf78adb0500742c20d8bf3b9e 154 SUPERFAMILY SSF54427 25 130 4.39E-37 T 15-10-2018 IPR032710 NTF2-like domain superfamily AM378_08330 0b92f34bf78adb0500742c20d8bf3b9e 154 SUPERFAMILY SSF103642 134 153 6.05E-7 T 15-10-2018 AM378_08330 0b92f34bf78adb0500742c20d8bf3b9e 154 Pfam PF02810 SEC-C motif 136 154 1.5E-9 T 15-10-2018 IPR004027 SEC-C motif AM378_08330 0b92f34bf78adb0500742c20d8bf3b9e 154 Pfam PF02810 SEC-C motif 3 19 2.6E-4 T 15-10-2018 IPR004027 SEC-C motif AM378_09690 1af4d9185d2b54a13d7d0249f78907a1 314 Pfam PF10135 Rod binding protein 50 96 4.2E-17 T 15-10-2018 IPR019301 Flagellar protein FlgJ, N-terminal AM378_09690 1af4d9185d2b54a13d7d0249f78907a1 314 PRINTS PR01002 Flagellar protein FlgJ signature 53 73 5.9E-109 T 15-10-2018 AM378_09690 1af4d9185d2b54a13d7d0249f78907a1 314 PRINTS PR01002 Flagellar protein FlgJ signature 148 171 5.9E-109 T 15-10-2018 AM378_09690 1af4d9185d2b54a13d7d0249f78907a1 314 PRINTS PR01002 Flagellar protein FlgJ signature 192 213 5.9E-109 T 15-10-2018 AM378_09690 1af4d9185d2b54a13d7d0249f78907a1 314 PRINTS PR01002 Flagellar protein FlgJ signature 278 296 5.9E-109 T 15-10-2018 AM378_09690 1af4d9185d2b54a13d7d0249f78907a1 314 PRINTS PR01002 Flagellar protein FlgJ signature 214 235 5.9E-109 T 15-10-2018 AM378_09690 1af4d9185d2b54a13d7d0249f78907a1 314 PRINTS PR01002 Flagellar protein FlgJ signature 172 190 5.9E-109 T 15-10-2018 AM378_09690 1af4d9185d2b54a13d7d0249f78907a1 314 PRINTS PR01002 Flagellar protein FlgJ signature 258 277 5.9E-109 T 15-10-2018 AM378_09690 1af4d9185d2b54a13d7d0249f78907a1 314 PRINTS PR01002 Flagellar protein FlgJ signature 296 313 5.9E-109 T 15-10-2018 AM378_09690 1af4d9185d2b54a13d7d0249f78907a1 314 PRINTS PR01002 Flagellar protein FlgJ signature 6 26 5.9E-109 T 15-10-2018 AM378_09690 1af4d9185d2b54a13d7d0249f78907a1 314 PRINTS PR01002 Flagellar protein FlgJ signature 112 137 5.9E-109 T 15-10-2018 AM378_09690 1af4d9185d2b54a13d7d0249f78907a1 314 PRINTS PR01002 Flagellar protein FlgJ signature 28 51 5.9E-109 T 15-10-2018 AM378_09690 1af4d9185d2b54a13d7d0249f78907a1 314 PRINTS PR01002 Flagellar protein FlgJ signature 236 257 5.9E-109 T 15-10-2018 AM378_09690 1af4d9185d2b54a13d7d0249f78907a1 314 PRINTS PR01002 Flagellar protein FlgJ signature 74 96 5.9E-109 T 15-10-2018 AM378_09690 1af4d9185d2b54a13d7d0249f78907a1 314 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 163 296 2.8E-20 T 15-10-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 AM378_09690 1af4d9185d2b54a13d7d0249f78907a1 314 SMART SM00047 143 307 2.8E-46 T 15-10-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 AM378_09690 1af4d9185d2b54a13d7d0249f78907a1 314 Gene3D G3DSA:1.10.530.10 153 293 4.9E-47 T 15-10-2018 AM378_09690 1af4d9185d2b54a13d7d0249f78907a1 314 TIGRFAM TIGR02541 flagell_FlgJ: flagellar rod assembly protein/muramidase FlgJ 12 296 2.1E-111 T 15-10-2018 IPR013377 Peptidoglycan hydrolase FlgJ GO:0016798|GO:0044780 AM378_09690 1af4d9185d2b54a13d7d0249f78907a1 314 Gene3D G3DSA:2.10.70.40 187 239 4.9E-47 T 15-10-2018 AM378_02585 b4c270b1e5176a4818bb391e038cbe92 280 TIGRFAM TIGR02821 fghA_ester_D: S-formylglutathione hydrolase 6 278 1.2E-119 T 15-10-2018 IPR014186 S-formylglutathione hydrolase GO:0018738|GO:0046294 KEGG: 00680+3.1.2.12|MetaCyc: PWY-1801|Reactome: R-HSA-156590 AM378_02585 b4c270b1e5176a4818bb391e038cbe92 280 Pfam PF00756 Putative esterase 26 261 1.2E-66 T 15-10-2018 IPR000801 Putative esterase Reactome: R-HSA-156590 AM378_02585 b4c270b1e5176a4818bb391e038cbe92 280 Gene3D G3DSA:3.40.50.1820 1 279 2.7E-92 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold AM378_02585 b4c270b1e5176a4818bb391e038cbe92 280 SUPERFAMILY SSF53474 5 278 3.86E-90 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold AM378_15985 c0d8ad4de720c5a2a1f974a374308152 356 Gene3D G3DSA:3.40.50.10440 11 183 2.0E-63 T 15-10-2018 AM378_15985 c0d8ad4de720c5a2a1f974a374308152 356 SUPERFAMILY SSF82549 11 355 2.14E-124 T 15-10-2018 AM378_15985 c0d8ad4de720c5a2a1f974a374308152 356 Pfam PF02733 Dak1 domain 17 351 1.3E-124 T 15-10-2018 IPR004006 DhaK domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 AM378_15985 c0d8ad4de720c5a2a1f974a374308152 356 TIGRFAM TIGR02363 dhaK1: dihydroxyacetone kinase, DhaK subunit 1 352 1.1E-147 T 15-10-2018 IPR012736 Dihydroxyacetone kinase DhaK, subunit 1 KEGG: 00561+2.7.1.121 AM378_15985 c0d8ad4de720c5a2a1f974a374308152 356 Gene3D G3DSA:3.30.1180.20 184 356 1.5E-63 T 15-10-2018 AM378_15465 1afab83359725ac09b25239a95d2883f 115 ProDom PD074041 YACC EXPORTED PRECURSOR SIGNAL PERIPLASMIC Y0776 SIMILAR ECS0126 STY0189 ESCHERICHIA 15 113 2.0E-46 T 15-10-2018 AM378_15465 1afab83359725ac09b25239a95d2883f 115 Gene3D G3DSA:1.20.58.1630 23 114 2.1E-11 T 15-10-2018 IPR038432 PulS/OutS-like superfamily AM378_15465 1afab83359725ac09b25239a95d2883f 115 Pfam PF09691 Type II secretion system pilotin lipoprotein (PulS_OutS) 24 106 5.8E-11 T 15-10-2018 IPR019114 Chaperone lipoprotein, PulS/OutS-like AM378_16370 a67b4375e8cd479711928a997311a15f 168 Gene3D G3DSA:3.30.2010.10 57 161 1.7E-6 T 15-10-2018 AM378_16370 a67b4375e8cd479711928a997311a15f 168 Pfam PF01863 Protein of unknown function DUF45 93 149 6.0E-11 T 15-10-2018 IPR002725 Protein of unknown function DUF45 AM378_16870 91284330558feeca01a3d001be0dbb5a 347 SUPERFAMILY SSF53067 153 340 3.69E-50 T 15-10-2018 AM378_16870 91284330558feeca01a3d001be0dbb5a 347 Pfam PF06723 MreB/Mbl protein 11 338 1.5E-150 T 15-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 AM378_16870 91284330558feeca01a3d001be0dbb5a 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 72 95 1.2E-65 T 15-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 AM378_16870 91284330558feeca01a3d001be0dbb5a 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 191 211 1.2E-65 T 15-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 AM378_16870 91284330558feeca01a3d001be0dbb5a 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 52 70 1.2E-65 T 15-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 AM378_16870 91284330558feeca01a3d001be0dbb5a 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 136 155 1.2E-65 T 15-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 AM378_16870 91284330558feeca01a3d001be0dbb5a 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 304 330 1.2E-65 T 15-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 AM378_16870 91284330558feeca01a3d001be0dbb5a 347 SUPERFAMILY SSF53067 9 152 8.89E-38 T 15-10-2018 AM378_16870 91284330558feeca01a3d001be0dbb5a 347 Gene3D G3DSA:3.90.640.10 190 263 1.7E-130 T 15-10-2018 AM378_16870 91284330558feeca01a3d001be0dbb5a 347 Gene3D G3DSA:3.30.420.40 158 321 1.7E-130 T 15-10-2018 AM378_16870 91284330558feeca01a3d001be0dbb5a 347 Gene3D G3DSA:3.30.420.40 14 331 1.7E-130 T 15-10-2018 AM378_16870 91284330558feeca01a3d001be0dbb5a 347 TIGRFAM TIGR00904 mreB: cell shape determining protein, MreB/Mrl family 9 339 9.6E-171 T 15-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 AM378_03435 6278a2e1a94f58031beb57f269731659 121 SUPERFAMILY SSF159888 20 118 5.89E-11 T 15-10-2018 AM378_03435 6278a2e1a94f58031beb57f269731659 121 Pfam PF08818 Domain of unknown function (DU1801) 25 115 1.6E-11 T 15-10-2018 IPR014922 Domain of unknown function DUF1801 AM378_05465 e2efa55b3b44682f693188ebe910a516 241 Pfam PF13618 Gluconate 2-dehydrogenase subunit 3 60 214 4.2E-39 T 15-10-2018 IPR027056 Gluconate 2-dehydrogenase subunit 3 KEGG: 00030+1.1.99.3|MetaCyc: PWY-7165 AM378_05775 27f212ff4bc17b8f9a8793fb29ca778f 383 Pfam PF02353 Mycolic acid cyclopropane synthetase 108 368 1.5E-101 T 15-10-2018 AM378_05775 27f212ff4bc17b8f9a8793fb29ca778f 383 SUPERFAMILY SSF53335 117 370 2.09E-77 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM378_05775 27f212ff4bc17b8f9a8793fb29ca778f 383 PIRSF PIRSF003085 6 379 1.3E-124 T 15-10-2018 IPR003333 Mycolic acid cyclopropane synthase GO:0008610 AM378_05775 27f212ff4bc17b8f9a8793fb29ca778f 383 Gene3D G3DSA:3.40.50.150 117 376 1.3E-100 T 15-10-2018 AM378_09165 71c7a5cb034a016a0dcd3625d70a8d45 432 Pfam PF14667 Polysaccharide biosynthesis C-terminal domain 324 409 7.1E-8 T 15-10-2018 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain AM378_09165 71c7a5cb034a016a0dcd3625d70a8d45 432 Pfam PF01943 Polysaccharide biosynthesis protein 6 272 1.8E-19 T 15-10-2018 IPR002797 Polysaccharide biosynthesis protein GO:0016020 AM378_02320 370588eb7e04f97daab837275b644054 201 Gene3D G3DSA:1.20.950.20 2 188 3.3E-23 T 15-10-2018 AM378_02320 370588eb7e04f97daab837275b644054 201 Pfam PF01292 Prokaryotic cytochrome b561 10 197 6.9E-22 T 15-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 AM378_02320 370588eb7e04f97daab837275b644054 201 PRINTS PR00161 Nickel-dependent hydrogenase/B-type cytochrome signature 163 185 1.8E-5 T 15-10-2018 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0009055|GO:0016021 AM378_02320 370588eb7e04f97daab837275b644054 201 PRINTS PR00161 Nickel-dependent hydrogenase/B-type cytochrome signature 12 35 1.8E-5 T 15-10-2018 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0009055|GO:0016021 AM378_02320 370588eb7e04f97daab837275b644054 201 SUPERFAMILY SSF81342 6 199 4.47E-37 T 15-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 AM378_08770 f4fccbb9d6431c684768bc7355292e49 306 Gene3D G3DSA:3.40.50.720 1 120 2.7E-29 T 15-10-2018 AM378_08770 f4fccbb9d6431c684768bc7355292e49 306 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 4 121 7.4E-24 T 15-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 AM378_08770 f4fccbb9d6431c684768bc7355292e49 306 Gene3D G3DSA:3.30.360.10 121 306 2.4E-53 T 15-10-2018 AM378_08770 f4fccbb9d6431c684768bc7355292e49 306 SUPERFAMILY SSF55347 123 264 9.81E-44 T 15-10-2018 AM378_08770 f4fccbb9d6431c684768bc7355292e49 306 SUPERFAMILY SSF51735 3 138 8.15E-42 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily AM378_05960 24173ff8ec065eb80fa4a21559b5080c 126 Gene3D G3DSA:3.30.1330.40 3 126 1.4E-29 T 15-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 AM378_05960 24173ff8ec065eb80fa4a21559b5080c 126 SUPERFAMILY SSF55298 3 125 3.77E-28 T 15-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 AM378_05960 24173ff8ec065eb80fa4a21559b5080c 126 Pfam PF01042 Endoribonuclease L-PSP 13 123 3.9E-20 T 15-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 AM378_17090 89c3e50ceb14122b2d57c209db3a0fd0 170 Gene3D G3DSA:1.10.10.10 1 89 2.0E-36 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_17090 89c3e50ceb14122b2d57c209db3a0fd0 170 Gene3D G3DSA:3.30.1490.190 90 152 1.1E-17 T 15-10-2018 AM378_17090 89c3e50ceb14122b2d57c209db3a0fd0 170 SUPERFAMILY SSF46785 12 144 1.51E-33 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM378_17090 89c3e50ceb14122b2d57c209db3a0fd0 170 Pfam PF01475 Ferric uptake regulator family 20 138 9.8E-16 T 15-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 AM378_23125 0b1863375dc32cc3bf4beb1620d8cf60 106 Gene3D G3DSA:1.20.5.400 21 63 9.1E-15 T 15-10-2018 AM378_23125 0b1863375dc32cc3bf4beb1620d8cf60 106 Hamap MF_00599 Cell division protein FtsB [ftsB]. 1 90 36.948 T 15-10-2018 IPR023081 Cell division protein FtsB AM378_23125 0b1863375dc32cc3bf4beb1620d8cf60 106 Pfam PF04977 Septum formation initiator 11 89 3.7E-31 T 15-10-2018 IPR007060 Septum formation initiator FtsL/DivIC AM378_06740 1c98310816de56116f435f490a12e375 261 Pfam PF01925 Sulfite exporter TauE/SafE 15 256 3.9E-44 T 15-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 AM378_18505 3698e1cd7725c48a7b1bf4d457eb6aa6 233 PIRSF PIRSF028451 4 227 1.1E-28 T 15-10-2018 IPR015996 Uncharacterised conserved protein UCP028451 AM378_18505 3698e1cd7725c48a7b1bf4d457eb6aa6 233 Pfam PF09365 Conserved hypothetical protein (DUF2461) 13 218 3.3E-45 T 15-10-2018 IPR012808 Conserved hypothetical protein CHP02453 AM378_16015 92ea4a5cece2b37fe23819d8cc4bbdad 217 SUPERFAMILY SSF55821 7 213 3.66E-86 T 15-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily AM378_16015 92ea4a5cece2b37fe23819d8cc4bbdad 217 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 11 213 43.035 T 15-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AM378_16015 92ea4a5cece2b37fe23819d8cc4bbdad 217 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 17 208 7.9E-84 T 15-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AM378_16015 92ea4a5cece2b37fe23819d8cc4bbdad 217 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 14 209 9.0E-83 T 15-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AM378_16015 92ea4a5cece2b37fe23819d8cc4bbdad 217 Gene3D G3DSA:3.90.870.10 1 217 4.8E-96 T 15-10-2018 AM378_06625 8bd9643e4c824ec69e842155c5663ef3 61 Gene3D G3DSA:3.30.530.20 15 55 1.1E-5 T 15-10-2018 IPR023393 START-like domain superfamily AM378_10720 e68c8d76d76301cd80e84b4d0d9f8a1f 172 SUPERFAMILY SSF55729 2 166 1.38E-34 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase AM378_10720 e68c8d76d76301cd80e84b4d0d9f8a1f 172 Pfam PF13420 Acetyltransferase (GNAT) domain 3 155 1.7E-21 T 15-10-2018 AM378_10720 e68c8d76d76301cd80e84b4d0d9f8a1f 172 Gene3D G3DSA:3.40.630.30 1 171 3.7E-56 T 15-10-2018 AM378_20035 3e8b44231b784be71941246718e586ef 416 Hamap MF_02024 Lipid III flippase [wzxE]. 1 416 40.162 T 15-10-2018 IPR032896 Lipid III flippase WzxE GO:0005886|GO:0009246 AM378_20035 3e8b44231b784be71941246718e586ef 416 Pfam PF01943 Polysaccharide biosynthesis protein 4 283 1.4E-10 T 15-10-2018 IPR002797 Polysaccharide biosynthesis protein GO:0016020 AM378_23840 8bcf9dde2b05578713faca2eadab15df 255 Pfam PF02525 Flavodoxin-like fold 1 205 1.0E-51 T 15-10-2018 IPR003680 Flavodoxin-like fold AM378_23840 8bcf9dde2b05578713faca2eadab15df 255 Gene3D G3DSA:3.40.50.360 1 246 7.1E-73 T 15-10-2018 IPR029039 Flavoprotein-like superfamily AM378_23840 8bcf9dde2b05578713faca2eadab15df 255 SUPERFAMILY SSF52218 1 236 5.39E-62 T 15-10-2018 IPR029039 Flavoprotein-like superfamily AM378_23020 a38b1c049b4ac83214e0c8fb571b6469 396 Gene3D G3DSA:3.50.50.60 5 329 8.6E-81 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AM378_23020 a38b1c049b4ac83214e0c8fb571b6469 396 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 4 143 9.7E-9 T 15-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM378_23020 a38b1c049b4ac83214e0c8fb571b6469 396 SUPERFAMILY SSF51905 4 331 4.45E-21 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AM378_23020 a38b1c049b4ac83214e0c8fb571b6469 396 Gene3D G3DSA:3.50.50.60 116 271 8.6E-81 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AM378_23020 a38b1c049b4ac83214e0c8fb571b6469 396 SUPERFAMILY SSF51905 120 262 4.66E-18 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AM378_08715 87e9e4622de2013474fd948c21705b2a 271 SUPERFAMILY SSF117396 1 252 1.96E-62 T 15-10-2018 IPR036520 UPF0759 superfamily AM378_08715 87e9e4622de2013474fd948c21705b2a 271 Gene3D G3DSA:3.20.20.410 1 260 2.4E-39 T 15-10-2018 IPR036520 UPF0759 superfamily AM378_08715 87e9e4622de2013474fd948c21705b2a 271 Pfam PF01904 Protein of unknown function DUF72 20 248 1.9E-49 T 15-10-2018 IPR002763 Protein of unknown function DUF72 AM378_11965 6125ec10b1589941b694f231c7b9c31d 220 Pfam PF09335 SNARE associated Golgi protein 49 177 2.0E-26 T 15-10-2018 IPR032816 SNARE associated Golgi protein AM378_20490 9c7b858f51613a26a5e9bc357c518158 498 Hamap MF_01636 3-octaprenyl-4-hydroxybenzoate carboxy-lyase [ubiD]. 4 490 74.598 T 15-10-2018 IPR023677 UbiD decarboxylyase, bacteria GO:0005886|GO:0006744|GO:0008694 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 AM378_20490 9c7b858f51613a26a5e9bc357c518158 498 Gene3D G3DSA:1.20.5.570 458 498 5.6E-20 T 15-10-2018 AM378_20490 9c7b858f51613a26a5e9bc357c518158 498 SUPERFAMILY SSF50475 6 325 2.51E-129 T 15-10-2018 AM378_20490 9c7b858f51613a26a5e9bc357c518158 498 SUPERFAMILY SSF143968 326 489 2.09E-67 T 15-10-2018 AM378_20490 9c7b858f51613a26a5e9bc357c518158 498 Pfam PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 14 434 3.7E-174 T 15-10-2018 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 AM378_20490 9c7b858f51613a26a5e9bc357c518158 498 Gene3D G3DSA:3.40.1670.10 340 457 2.0E-51 T 15-10-2018 AM378_20490 9c7b858f51613a26a5e9bc357c518158 498 TIGRFAM TIGR00148 TIGR00148: decarboxylase, UbiD family 9 458 1.3E-184 T 15-10-2018 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 AM378_19595 a04aede8186ba036da24f61a1c79e7ee 183 SUPERFAMILY SSF158668 6 168 4.05E-57 T 15-10-2018 IPR038026 MtlR-like superfamily AM378_19595 a04aede8186ba036da24f61a1c79e7ee 183 Pfam PF05068 Mannitol repressor 8 167 2.9E-62 T 15-10-2018 IPR007761 Mannitol repressor MtlR-like AM378_19595 a04aede8186ba036da24f61a1c79e7ee 183 Gene3D G3DSA:1.20.120.330 2 170 2.7E-62 T 15-10-2018 AM378_16490 a65ff0ff7e8c7de174e69bb268cb43c5 196 Gene3D G3DSA:3.40.50.10490 2 196 4.8E-70 T 15-10-2018 AM378_16490 a65ff0ff7e8c7de174e69bb268cb43c5 196 Pfam PF13580 SIS domain 9 144 2.7E-33 T 15-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 AM378_16490 a65ff0ff7e8c7de174e69bb268cb43c5 196 SUPERFAMILY SSF53697 3 191 2.63E-50 T 15-10-2018 AM378_16490 a65ff0ff7e8c7de174e69bb268cb43c5 196 Hamap MF_01157 DnaA initiator-associating protein DiaA [diaA]. 1 196 61.064 T 15-10-2018 IPR023070 DnaA initiator-associating protein AM378_23135 e8e429738fd80eb12221c74bedcd5198 157 SUPERFAMILY SSF69765 1 156 6.67E-66 T 15-10-2018 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 AM378_23135 e8e429738fd80eb12221c74bedcd5198 157 Hamap MF_00107 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [ispF]. 1 156 36.7 T 15-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 AM378_23135 e8e429738fd80eb12221c74bedcd5198 157 TIGRFAM TIGR00151 ispF: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 2 156 1.3E-70 T 15-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 AM378_23135 e8e429738fd80eb12221c74bedcd5198 157 ProSitePatterns PS01350 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase signature. 35 50 - T 15-10-2018 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site GO:0008685 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 AM378_23135 e8e429738fd80eb12221c74bedcd5198 157 Pfam PF02542 YgbB family 1 154 3.0E-66 T 15-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 AM378_23135 e8e429738fd80eb12221c74bedcd5198 157 Gene3D G3DSA:3.30.1330.50 1 157 2.1E-71 T 15-10-2018 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 AM378_01265 9c049298f55542ff81bc52af7e41bce3 49 Pfam PF10766 Multidrug efflux pump-associated protein AcrZ 1 47 4.5E-29 T 15-10-2018 IPR019702 Multidrug efflux pump accessory protein AcrZ GO:0005886|GO:0006855|GO:0015238 AM378_01265 9c049298f55542ff81bc52af7e41bce3 49 Hamap MF_01484 Multidrug efflux pump accessory protein AcrZ [acrZ]. 1 47 19.024 T 15-10-2018 IPR019702 Multidrug efflux pump accessory protein AcrZ GO:0005886|GO:0006855|GO:0015238 AM378_01270 5dfc235b424ca1e81bdb57ce622317b6 257 PIRSF PIRSF004846 1 257 1.1E-80 T 15-10-2018 IPR005950 Molybdate ABC transporter, substrate-binding protein GO:0015689 AM378_01270 5dfc235b424ca1e81bdb57ce622317b6 257 Pfam PF13531 Bacterial extracellular solute-binding protein 28 253 3.0E-50 T 15-10-2018 AM378_01270 5dfc235b424ca1e81bdb57ce622317b6 257 TIGRFAM TIGR01256 modA: molybdate ABC transporter, periplasmic molybdate-binding protein 33 252 7.0E-80 T 15-10-2018 IPR005950 Molybdate ABC transporter, substrate-binding protein GO:0015689 AM378_01270 5dfc235b424ca1e81bdb57ce622317b6 257 Gene3D G3DSA:3.40.190.10 106 217 6.5E-88 T 15-10-2018 AM378_01270 5dfc235b424ca1e81bdb57ce622317b6 257 SUPERFAMILY SSF53850 26 255 4.92E-71 T 15-10-2018 AM378_01270 5dfc235b424ca1e81bdb57ce622317b6 257 Gene3D G3DSA:3.40.190.10 29 253 6.5E-88 T 15-10-2018 AM378_08695 716c5505f58ca8d4297a4332a3f627c7 148 SUPERFAMILY SSF55811 3 142 2.17E-23 T 15-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 AM378_08695 716c5505f58ca8d4297a4332a3f627c7 148 Gene3D G3DSA:3.90.79.10 1 147 8.2E-43 T 15-10-2018 AM378_08695 716c5505f58ca8d4297a4332a3f627c7 148 Pfam PF00293 NUDIX domain 5 140 1.2E-16 T 15-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 AM378_08695 716c5505f58ca8d4297a4332a3f627c7 148 PRINTS PR01404 DATP pyrophosphohydrolase signature 126 139 1.3E-44 T 15-10-2018 IPR003564 Dihydroneopterin triphosphate diphosphatase GO:0008828|GO:0019177|GO:0046656 KEGG: 00790+3.6.1.67|MetaCyc: PWY-6147 AM378_08695 716c5505f58ca8d4297a4332a3f627c7 148 PRINTS PR01404 DATP pyrophosphohydrolase signature 20 41 1.3E-44 T 15-10-2018 IPR003564 Dihydroneopterin triphosphate diphosphatase GO:0008828|GO:0019177|GO:0046656 KEGG: 00790+3.6.1.67|MetaCyc: PWY-6147 AM378_08695 716c5505f58ca8d4297a4332a3f627c7 148 PRINTS PR01404 DATP pyrophosphohydrolase signature 3 20 1.3E-44 T 15-10-2018 IPR003564 Dihydroneopterin triphosphate diphosphatase GO:0008828|GO:0019177|GO:0046656 KEGG: 00790+3.6.1.67|MetaCyc: PWY-6147 AM378_08695 716c5505f58ca8d4297a4332a3f627c7 148 PRINTS PR01404 DATP pyrophosphohydrolase signature 71 90 1.3E-44 T 15-10-2018 IPR003564 Dihydroneopterin triphosphate diphosphatase GO:0008828|GO:0019177|GO:0046656 KEGG: 00790+3.6.1.67|MetaCyc: PWY-6147 AM378_08695 716c5505f58ca8d4297a4332a3f627c7 148 PRINTS PR01404 DATP pyrophosphohydrolase signature 99 120 1.3E-44 T 15-10-2018 IPR003564 Dihydroneopterin triphosphate diphosphatase GO:0008828|GO:0019177|GO:0046656 KEGG: 00790+3.6.1.67|MetaCyc: PWY-6147 AM378_08695 716c5505f58ca8d4297a4332a3f627c7 148 ProSitePatterns PS00893 Nudix box signature. 38 59 - T 15-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 AM378_11185 b33e4c31024ce93aabe24ec710d96a68 329 Pfam PF02653 Branched-chain amino acid transport system / permease component 57 320 2.8E-52 T 15-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 AM378_10490 a809dc3cfe3da18abcea5936d034059a 163 Gene3D G3DSA:2.60.40.1090 40 163 9.5E-33 T 15-10-2018 IPR036937 Fimbrial-type adhesion domain superfamily GO:0007155|GO:0009289 AM378_10490 a809dc3cfe3da18abcea5936d034059a 163 SUPERFAMILY SSF49401 37 163 9.94E-22 T 15-10-2018 IPR008966 Adhesion domain superfamily AM378_10490 a809dc3cfe3da18abcea5936d034059a 163 Pfam PF00419 Fimbrial protein 29 163 6.7E-14 T 15-10-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM378_21230 fc6ebafba71a0778303f628eab5fad2a 87 Gene3D G3DSA:3.30.1660.10 21 87 3.1E-21 T 15-10-2018 IPR025543 Dodecin-like AM378_21230 fc6ebafba71a0778303f628eab5fad2a 87 Pfam PF07338 Protein of unknown function (DUF1471) 34 87 2.3E-22 T 15-10-2018 IPR010854 Domain of unknown function DUF1471 AM378_21230 fc6ebafba71a0778303f628eab5fad2a 87 SUPERFAMILY SSF159871 3 87 1.96E-26 T 15-10-2018 IPR036275 YdgH-like superfamily AM378_01900 a990face97f25cad043bc3310d58253e 422 Pfam PF13433 Periplasmic binding protein domain 31 407 6.2E-172 T 15-10-2018 AM378_01900 a990face97f25cad043bc3310d58253e 422 TIGRFAM TIGR03407 urea_ABC_UrtA: urea ABC transporter, urea binding protein 31 404 2.6E-177 T 15-10-2018 IPR017777 Urea ABC transporter, substrate-binding protein UrtA-like AM378_01900 a990face97f25cad043bc3310d58253e 422 Gene3D G3DSA:3.40.50.2300 146 395 5.6E-142 T 15-10-2018 AM378_01900 a990face97f25cad043bc3310d58253e 422 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 53 69 6.3E-6 T 15-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 AM378_01900 a990face97f25cad043bc3310d58253e 422 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 31 47 6.3E-6 T 15-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 AM378_01900 a990face97f25cad043bc3310d58253e 422 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 290 303 6.3E-6 T 15-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 AM378_01900 a990face97f25cad043bc3310d58253e 422 Gene3D G3DSA:3.40.50.2300 33 375 5.6E-142 T 15-10-2018 AM378_01900 a990face97f25cad043bc3310d58253e 422 SUPERFAMILY SSF53822 30 409 5.5E-93 T 15-10-2018 IPR028082 Periplasmic binding protein-like I AM378_01540 9c72cf1c039a23735b93eb5fd5d6afd7 270 Pfam PF03180 NLPA lipoprotein 32 270 2.6E-91 T 15-10-2018 IPR004872 Lipoprotein NlpA family AM378_01540 9c72cf1c039a23735b93eb5fd5d6afd7 270 Gene3D G3DSA:3.40.190.10 33 264 5.5E-92 T 15-10-2018 AM378_01540 9c72cf1c039a23735b93eb5fd5d6afd7 270 TIGRFAM TIGR00363 TIGR00363: lipoprotein, YaeC family 15 270 1.3E-134 T 15-10-2018 IPR004872 Lipoprotein NlpA family AM378_01540 9c72cf1c039a23735b93eb5fd5d6afd7 270 Gene3D G3DSA:3.40.190.10 114 220 5.5E-92 T 15-10-2018 AM378_01540 9c72cf1c039a23735b93eb5fd5d6afd7 270 PIRSF PIRSF002854 2 270 3.9E-92 T 15-10-2018 IPR004872 Lipoprotein NlpA family AM378_01540 9c72cf1c039a23735b93eb5fd5d6afd7 270 SUPERFAMILY SSF53850 32 270 7.91E-74 T 15-10-2018 AM378_10605 d834f1e2d6dc1ac4ac347957a811e5bf 631 SUPERFAMILY SSF54593 292 628 3.39E-56 T 15-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AM378_10605 d834f1e2d6dc1ac4ac347957a811e5bf 631 Pfam PF14696 Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal 301 433 2.5E-24 T 15-10-2018 AM378_10605 d834f1e2d6dc1ac4ac347957a811e5bf 631 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 449 585 2.6E-4 T 15-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AM378_10605 d834f1e2d6dc1ac4ac347957a811e5bf 631 Gene3D G3DSA:3.10.180.10 294 444 5.8E-30 T 15-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AM378_10605 d834f1e2d6dc1ac4ac347957a811e5bf 631 Gene3D G3DSA:3.20.20.150 1 268 1.3E-71 T 15-10-2018 AM378_10605 d834f1e2d6dc1ac4ac347957a811e5bf 631 Pfam PF01261 Xylose isomerase-like TIM barrel 18 218 3.6E-36 T 15-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain AM378_10605 d834f1e2d6dc1ac4ac347957a811e5bf 631 SUPERFAMILY SSF51658 1 268 2.07E-74 T 15-10-2018 IPR036237 Xylose isomerase-like superfamily AM378_10605 d834f1e2d6dc1ac4ac347957a811e5bf 631 Gene3D G3DSA:3.10.180.10 445 631 2.4E-42 T 15-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AM378_04820 5e90e90124c219fb51bd5c086905d6ff 207 Gene3D G3DSA:2.50.20.10 30 207 1.8E-60 T 15-10-2018 AM378_04820 5e90e90124c219fb51bd5c086905d6ff 207 Pfam PF03550 Outer membrane lipoprotein LolB 51 204 1.1E-47 T 15-10-2018 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 AM378_04820 5e90e90124c219fb51bd5c086905d6ff 207 TIGRFAM TIGR00548 lolB: outer membrane lipoprotein LolB 8 205 5.9E-74 T 15-10-2018 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 AM378_04820 5e90e90124c219fb51bd5c086905d6ff 207 SUPERFAMILY SSF89392 37 206 3.02E-54 T 15-10-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX AM378_04820 5e90e90124c219fb51bd5c086905d6ff 207 Hamap MF_00233 Outer-membrane lipoprotein LolB [lolB]. 6 206 29.255 T 15-10-2018 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 AM378_17830 49775336185c793d4a93231a1f93d608 414 PRINTS PR01032 Gene IV protein signature 393 414 6.9E-8 T 15-10-2018 AM378_17830 49775336185c793d4a93231a1f93d608 414 PRINTS PR01032 Gene IV protein signature 274 297 6.9E-8 T 15-10-2018 AM378_17830 49775336185c793d4a93231a1f93d608 414 PRINTS PR01032 Gene IV protein signature 233 256 6.9E-8 T 15-10-2018 AM378_17830 49775336185c793d4a93231a1f93d608 414 PRINTS PR01032 Gene IV protein signature 340 368 6.9E-8 T 15-10-2018 AM378_17830 49775336185c793d4a93231a1f93d608 414 Gene3D G3DSA:3.30.1370.120 121 182 6.0E-8 T 15-10-2018 IPR038591 NolW-like superfamily AM378_17830 49775336185c793d4a93231a1f93d608 414 Pfam PF03958 Bacterial type II/III secretion system short domain 121 183 9.1E-10 T 15-10-2018 IPR005644 NolW-like AM378_17830 49775336185c793d4a93231a1f93d608 414 TIGRFAM TIGR02515 IV_pilus_PilQ: type IV pilus secretin PilQ 25 412 8.0E-121 T 15-10-2018 IPR013355 Type IV pilus secretin PilQ AM378_17830 49775336185c793d4a93231a1f93d608 414 Gene3D G3DSA:3.55.50.30 13 120 5.4E-27 T 15-10-2018 AM378_17830 49775336185c793d4a93231a1f93d608 414 Pfam PF00263 Bacterial type II and III secretion system protein 253 413 1.2E-45 T 15-10-2018 IPR004846 Type II/III secretion system GO:0009306 AM378_17830 49775336185c793d4a93231a1f93d608 414 PRINTS PR00811 Bacterial general secretion pathway protein D signature 377 395 1.3E-14 T 15-10-2018 IPR001775 GspD/PilQ family AM378_17830 49775336185c793d4a93231a1f93d608 414 PRINTS PR00811 Bacterial general secretion pathway protein D signature 400 414 1.3E-14 T 15-10-2018 IPR001775 GspD/PilQ family AM378_17830 49775336185c793d4a93231a1f93d608 414 PRINTS PR00811 Bacterial general secretion pathway protein D signature 249 273 1.3E-14 T 15-10-2018 IPR001775 GspD/PilQ family AM378_13850 e3ab349b7a1d9df1957ec74748f601ae 150 Gene3D G3DSA:3.40.630.30 3 139 9.3E-16 T 15-10-2018 AM378_13850 e3ab349b7a1d9df1957ec74748f601ae 150 SUPERFAMILY SSF55729 3 137 4.65E-19 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase AM378_13850 e3ab349b7a1d9df1957ec74748f601ae 150 Pfam PF00583 Acetyltransferase (GNAT) family 43 129 7.6E-9 T 15-10-2018 IPR000182 GNAT domain AM378_01275 f01ad7359fedef7b72fb1829d83ee84c 229 SUPERFAMILY SSF161098 5 219 9.68E-52 T 15-10-2018 IPR035906 MetI-like superfamily AM378_01275 f01ad7359fedef7b72fb1829d83ee84c 229 TIGRFAM TIGR02141 modB_ABC: molybdate ABC transporter, permease protein 13 220 7.1E-75 T 15-10-2018 IPR011867 Molybdate ABC transporter, permease protein GO:0015098|GO:0015689|GO:0016021 AM378_01275 f01ad7359fedef7b72fb1829d83ee84c 229 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 26 227 4.1E-24 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AM378_01275 f01ad7359fedef7b72fb1829d83ee84c 229 Gene3D G3DSA:1.10.3720.10 2 225 1.4E-64 T 15-10-2018 IPR035906 MetI-like superfamily AM378_10750 228dca4c87fda53ac8a4ab22f7faa791 369 Gene3D G3DSA:3.40.50.2000 191 363 4.2E-38 T 15-10-2018 AM378_10750 228dca4c87fda53ac8a4ab22f7faa791 369 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 197 325 6.3E-24 T 15-10-2018 IPR002201 Glycosyl transferase, family 9 GO:0016757 AM378_10750 228dca4c87fda53ac8a4ab22f7faa791 369 SUPERFAMILY SSF53756 38 360 1.15E-62 T 15-10-2018 AM378_10750 228dca4c87fda53ac8a4ab22f7faa791 369 Gene3D G3DSA:3.40.50.2000 31 184 2.0E-21 T 15-10-2018 AM378_12880 1aba4c6836c4d0f8e173eb3137b7b30e 150 Pfam PF13673 Acetyltransferase (GNAT) domain 37 136 1.6E-6 T 15-10-2018 IPR000182 GNAT domain AM378_12880 1aba4c6836c4d0f8e173eb3137b7b30e 150 Gene3D G3DSA:3.40.630.30 11 139 1.6E-36 T 15-10-2018 AM378_12880 1aba4c6836c4d0f8e173eb3137b7b30e 150 SUPERFAMILY SSF55729 24 138 2.32E-17 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase AM378_15090 b03620420db4c1e6c43ad3d3da5d1b30 272 SUPERFAMILY SSF46785 20 93 3.16E-14 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM378_15090 b03620420db4c1e6c43ad3d3da5d1b30 272 Gene3D G3DSA:3.30.450.40 91 270 5.6E-67 T 15-10-2018 IPR029016 GAF-like domain superfamily AM378_15090 b03620420db4c1e6c43ad3d3da5d1b30 272 Pfam PF01614 Bacterial transcriptional regulator 139 264 1.4E-41 T 15-10-2018 IPR014757 Transcription regulator IclR, C-terminal AM378_15090 b03620420db4c1e6c43ad3d3da5d1b30 272 Pfam PF09339 IclR helix-turn-helix domain 21 71 6.6E-13 T 15-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 AM378_15090 b03620420db4c1e6c43ad3d3da5d1b30 272 SUPERFAMILY SSF55781 86 268 2.29E-46 T 15-10-2018 AM378_15090 b03620420db4c1e6c43ad3d3da5d1b30 272 SMART SM00346 19 109 1.9E-38 T 15-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 AM378_15090 b03620420db4c1e6c43ad3d3da5d1b30 272 Gene3D G3DSA:1.10.10.10 18 90 2.1E-17 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_21510 78e6c6dc6d504747777c78f95a1d9183 286 PIRSF PIRSF011468 1 286 1.5E-166 T 15-10-2018 IPR010306 Alpha-D-ribose 1-methylphosphonate 5-phosphate C-P-lyase GO:0016829|GO:0019700|GO:0051539 KEGG: 00440+4.7.1.1|MetaCyc: PWY-7399|MetaCyc: PWY-7805|MetaCyc: PWY-7807 AM378_21510 78e6c6dc6d504747777c78f95a1d9183 286 Pfam PF06007 Phosphonate metabolism protein PhnJ 7 278 1.3E-147 T 15-10-2018 IPR010306 Alpha-D-ribose 1-methylphosphonate 5-phosphate C-P-lyase GO:0016829|GO:0019700|GO:0051539 KEGG: 00440+4.7.1.1|MetaCyc: PWY-7399|MetaCyc: PWY-7805|MetaCyc: PWY-7807 AM378_08135 578105b9f2c4a2db96809d93439bc91e 250 Pfam PF06790 Uncharacterised protein family (UPF0259) 1 247 1.0E-89 T 15-10-2018 IPR009627 Uncharacterised protein family UPF0259 AM378_08135 578105b9f2c4a2db96809d93439bc91e 250 Hamap MF_01067 UPF0259 membrane protein YciC [yciC]. 1 249 22.409 T 15-10-2018 IPR009627 Uncharacterised protein family UPF0259 AM378_05485 7f7f5bf73459f9cd91b02e96ba69740d 377 Pfam PF01497 Periplasmic binding protein 96 319 3.2E-23 T 15-10-2018 IPR002491 ABC transporter periplasmic binding domain AM378_05485 7f7f5bf73459f9cd91b02e96ba69740d 377 Gene3D G3DSA:3.40.50.1980 26 367 1.3E-87 T 15-10-2018 AM378_05485 7f7f5bf73459f9cd91b02e96ba69740d 377 SUPERFAMILY SSF53807 30 363 5.1E-48 T 15-10-2018 AM378_01915 c3f03cd8c9016e4688edb094d84742ca 268 Gene3D G3DSA:3.40.50.300 13 266 4.6E-57 T 15-10-2018 AM378_01915 c3f03cd8c9016e4688edb094d84742ca 268 Pfam PF00005 ABC transporter 43 197 8.6E-29 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM378_01915 c3f03cd8c9016e4688edb094d84742ca 268 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 245 267 1.4E-8 T 15-10-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal AM378_01915 c3f03cd8c9016e4688edb094d84742ca 268 TIGRFAM TIGR03411 urea_trans_UrtD: urea ABC transporter, ATP-binding protein UrtD 27 268 3.1E-114 T 15-10-2018 IPR017781 ABC transporter, urea, ATP-binding protein, UrtD AM378_01915 c3f03cd8c9016e4688edb094d84742ca 268 SUPERFAMILY SSF52540 25 266 1.08E-57 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_16595 44bc005334d49b0bd5a9c4d0437f9029 84 Pfam PF01722 BolA-like protein 19 74 1.9E-15 T 15-10-2018 IPR002634 BolA protein AM378_16595 44bc005334d49b0bd5a9c4d0437f9029 84 PIRSF PIRSF003113 1 83 1.0E-23 T 15-10-2018 IPR002634 BolA protein AM378_16595 44bc005334d49b0bd5a9c4d0437f9029 84 Gene3D G3DSA:3.30.300.90 1 84 4.7E-38 T 15-10-2018 AM378_16595 44bc005334d49b0bd5a9c4d0437f9029 84 SUPERFAMILY SSF82657 1 82 2.35E-30 T 15-10-2018 IPR036065 BolA-like superfamily AM378_06205 927caab6c1f572d9e036c9d22b781cce 238 Gene3D G3DSA:1.10.3720.10 44 233 4.8E-28 T 15-10-2018 IPR035906 MetI-like superfamily AM378_06205 927caab6c1f572d9e036c9d22b781cce 238 SUPERFAMILY SSF161098 40 223 1.27E-34 T 15-10-2018 IPR035906 MetI-like superfamily AM378_06205 927caab6c1f572d9e036c9d22b781cce 238 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 62 235 6.6E-24 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AM378_19890 6e18c71276d7a03f1331bf70837d80e7 300 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 116 299 3.3E-30 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AM378_19890 6e18c71276d7a03f1331bf70837d80e7 300 SUPERFAMILY SSF161098 93 280 2.09E-29 T 15-10-2018 IPR035906 MetI-like superfamily AM378_19890 6e18c71276d7a03f1331bf70837d80e7 300 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 17 69 1.0E-13 T 15-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain AM378_19890 6e18c71276d7a03f1331bf70837d80e7 300 Gene3D G3DSA:1.10.3720.10 86 298 1.3E-23 T 15-10-2018 IPR035906 MetI-like superfamily AM378_05360 336299f569c1006ebb12db96663d9d19 464 PRINTS PR01036 Tetracycline resistance protein TetB signature 110 130 1.2E-9 T 15-10-2018 AM378_05360 336299f569c1006ebb12db96663d9d19 464 PRINTS PR01036 Tetracycline resistance protein TetB signature 402 421 1.2E-9 T 15-10-2018 AM378_05360 336299f569c1006ebb12db96663d9d19 464 PRINTS PR01036 Tetracycline resistance protein TetB signature 140 164 1.2E-9 T 15-10-2018 AM378_05360 336299f569c1006ebb12db96663d9d19 464 PRINTS PR01036 Tetracycline resistance protein TetB signature 304 328 1.2E-9 T 15-10-2018 AM378_05360 336299f569c1006ebb12db96663d9d19 464 PRINTS PR01036 Tetracycline resistance protein TetB signature 19 43 1.2E-9 T 15-10-2018 AM378_05360 336299f569c1006ebb12db96663d9d19 464 Gene3D G3DSA:1.20.1250.20 261 458 4.6E-20 T 15-10-2018 AM378_05360 336299f569c1006ebb12db96663d9d19 464 Pfam PF07690 Major Facilitator Superfamily 20 411 1.1E-48 T 15-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM378_05360 336299f569c1006ebb12db96663d9d19 464 SUPERFAMILY SSF103473 10 447 3.66E-62 T 15-10-2018 IPR036259 MFS transporter superfamily AM378_05360 336299f569c1006ebb12db96663d9d19 464 Gene3D G3DSA:1.20.1720.10 17 259 4.1E-43 T 15-10-2018 AM378_01220 3c4e881c7f83b6feff30b116636a1ce7 272 Pfam PF02517 CAAX protease self-immunity 169 258 9.0E-20 T 15-10-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 AM378_05710 d136382da038f4bd7bfcb22900ef51a9 428 SUPERFAMILY SSF101960 15 424 3.27E-108 T 15-10-2018 IPR037284 SUF system FeS cluster assembly, SufBD superfamily AM378_05710 d136382da038f4bd7bfcb22900ef51a9 428 TIGRFAM TIGR01981 sufD: FeS assembly protein SufD 137 414 1.3E-85 T 15-10-2018 IPR011542 SUF system FeS cluster assembly, SufD GO:0016226 AM378_05710 d136382da038f4bd7bfcb22900ef51a9 428 Pfam PF01458 Uncharacterized protein family (UPF0051) 175 398 2.5E-72 T 15-10-2018 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 AM378_04115 ad57a0c516f80f5cce95defab8ead179 282 SUPERFAMILY SSF82771 30 106 7.06E-10 T 15-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 AM378_04115 ad57a0c516f80f5cce95defab8ead179 282 Gene3D G3DSA:3.40.1440.10 16 111 1.4E-22 T 15-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 AM378_04115 ad57a0c516f80f5cce95defab8ead179 282 SMART SM00465 29 107 1.1E-9 T 15-10-2018 IPR000305 GIY-YIG endonuclease AM378_09400 5b9c80751ea5a5f9fd90fb934ec7d64c 247 Pfam PF05944 Phage small terminase subunit 35 162 6.4E-40 T 15-10-2018 IPR010270 Bacteriophage P2, GpM GO:0003677|GO:0004519|GO:0019069 AM378_10030 a6f19f24318b8cb0a34e5b3d71da5cad 155 Hamap MF_01896 DNA gyrase inhibitor [sbmC]. 1 155 37.656 T 15-10-2018 IPR024911 DNA gyrase inhibitor GyrI GO:0008657 AM378_10030 a6f19f24318b8cb0a34e5b3d71da5cad 155 Gene3D G3DSA:3.20.80.10 1 154 5.3E-40 T 15-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily AM378_10030 a6f19f24318b8cb0a34e5b3d71da5cad 155 SMART SM00871 1 153 2.2E-34 T 15-10-2018 IPR010499 Bacterial transcription activator, effector binding AM378_10030 a6f19f24318b8cb0a34e5b3d71da5cad 155 SUPERFAMILY SSF55136 1 154 7.5E-40 T 15-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily AM378_10030 a6f19f24318b8cb0a34e5b3d71da5cad 155 Pfam PF06445 GyrI-like small molecule binding domain 1 149 1.2E-27 T 15-10-2018 IPR029442 GyrI-like small molecule binding domain AM378_10990 7f7a8b63c8ac820e7ac88cd945795f06 315 Pfam PF05368 NmrA-like family 14 247 5.7E-18 T 15-10-2018 IPR008030 NmrA-like domain Reactome: R-HSA-70635 AM378_10990 7f7a8b63c8ac820e7ac88cd945795f06 315 Gene3D G3DSA:3.90.25.10 164 265 9.1E-28 T 15-10-2018 AM378_10990 7f7a8b63c8ac820e7ac88cd945795f06 315 Gene3D G3DSA:3.40.50.720 11 224 9.1E-28 T 15-10-2018 AM378_10990 7f7a8b63c8ac820e7ac88cd945795f06 315 SUPERFAMILY SSF51735 10 257 9.29E-21 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily AM378_14150 4ad7299fa74635e501d36821f432c594 271 SUPERFAMILY SSF53850 33 271 2.34E-84 T 15-10-2018 AM378_14150 4ad7299fa74635e501d36821f432c594 271 TIGRFAM TIGR00363 TIGR00363: lipoprotein, YaeC family 14 271 7.1E-147 T 15-10-2018 IPR004872 Lipoprotein NlpA family AM378_14150 4ad7299fa74635e501d36821f432c594 271 Pfam PF03180 NLPA lipoprotein 33 271 8.1E-101 T 15-10-2018 IPR004872 Lipoprotein NlpA family AM378_14150 4ad7299fa74635e501d36821f432c594 271 Gene3D G3DSA:3.40.190.10 34 265 3.6E-103 T 15-10-2018 AM378_14150 4ad7299fa74635e501d36821f432c594 271 PIRSF PIRSF002854 1 271 7.2E-107 T 15-10-2018 IPR004872 Lipoprotein NlpA family AM378_14150 4ad7299fa74635e501d36821f432c594 271 Gene3D G3DSA:3.40.190.10 115 221 3.6E-103 T 15-10-2018 AM378_03545 e7d27aa55cb9d3a317f570fcb8d7501d 257 Pfam PF02698 DUF218 domain 81 242 1.6E-23 T 15-10-2018 IPR003848 Domain of unknown function DUF218 AM378_13465 842a7700c5d42dcbf1e73cdf1112f26d 314 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 107 308 3.2E-16 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AM378_13465 842a7700c5d42dcbf1e73cdf1112f26d 314 SUPERFAMILY SSF161098 31 308 7.06E-44 T 15-10-2018 IPR035906 MetI-like superfamily AM378_13465 842a7700c5d42dcbf1e73cdf1112f26d 314 Gene3D G3DSA:1.10.3720.10 26 310 5.5E-44 T 15-10-2018 IPR035906 MetI-like superfamily AM378_13875 c707bfc6ee7b5424c2a06983bf9775c6 60 Pfam PF09926 Uncharacterized small protein (DUF2158) 4 42 2.1E-6 T 15-10-2018 IPR019226 Protein of unknown function DUF2158 AM378_20360 169ea653538337fc590b3c811d942c4d 395 SUPERFAMILY SSF53383 5 394 9.18E-99 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM378_20360 169ea653538337fc590b3c811d942c4d 395 Pfam PF00155 Aminotransferase class I and II 52 391 7.7E-36 T 15-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AM378_20360 169ea653538337fc590b3c811d942c4d 395 Gene3D G3DSA:3.90.1150.10 19 393 9.4E-124 T 15-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AM378_20360 169ea653538337fc590b3c811d942c4d 395 Gene3D G3DSA:3.40.640.10 66 290 9.4E-124 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AM378_00150 a4ae8cdbcaa61c26539c66e52a2b83b3 148 Gene3D G3DSA:3.30.1360.100 66 146 1.3E-18 T 15-10-2018 AM378_00150 a4ae8cdbcaa61c26539c66e52a2b83b3 148 Pfam PF04612 Type II secretion system (T2SS), protein M 32 141 9.5E-19 T 15-10-2018 IPR007690 Type II secretion system, protein M GO:0009306 AM378_00150 a4ae8cdbcaa61c26539c66e52a2b83b3 148 SUPERFAMILY SSF103054 68 141 1.15E-13 T 15-10-2018 IPR023229 Type II secretion system protein M, periplasmic domain superfamily AM378_02000 6704a6024b5f2d1090e045c2702dd16e 214 SUPERFAMILY SSF52499 3 204 4.71E-47 T 15-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 AM378_02000 6704a6024b5f2d1090e045c2702dd16e 214 Gene3D G3DSA:3.40.50.850 2 204 2.9E-46 T 15-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 AM378_02000 6704a6024b5f2d1090e045c2702dd16e 214 Pfam PF00857 Isochorismatase family 12 165 2.5E-22 T 15-10-2018 IPR000868 Isochorismatase-like GO:0003824 AM378_09890 75f4fce2b63e4b75a217a6c9fe64b441 211 Pfam PF12059 Protein of unknown function (DUF3540) 22 211 6.7E-64 T 15-10-2018 IPR021927 Protein of unknown function DUF3540 AM378_24340 c62a9fd6fed810f35ca675ef6fa9fba6 492 Gene3D G3DSA:1.20.1250.20 5 199 3.5E-17 T 15-10-2018 AM378_24340 c62a9fd6fed810f35ca675ef6fa9fba6 492 Gene3D G3DSA:1.20.1250.20 213 412 3.5E-15 T 15-10-2018 AM378_24340 c62a9fd6fed810f35ca675ef6fa9fba6 492 TIGRFAM TIGR00901 2A0125: AmpG-like permease 25 363 1.9E-119 T 15-10-2018 AM378_24340 c62a9fd6fed810f35ca675ef6fa9fba6 492 Pfam PF07690 Major Facilitator Superfamily 17 366 7.0E-33 T 15-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM378_24340 c62a9fd6fed810f35ca675ef6fa9fba6 492 SUPERFAMILY SSF103473 9 406 1.44E-44 T 15-10-2018 IPR036259 MFS transporter superfamily AM378_12715 10b101447464c71e412e252683d61e62 126 Pfam PF10828 Protein of unknown function (DUF2570) 9 111 1.5E-31 T 15-10-2018 IPR022538 Protein of unknown function DUF2570 AM378_15230 6fac5901167d53174f7a4cd948dc51f8 250 Pfam PF01435 Peptidase family M48 71 245 4.9E-26 T 15-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 AM378_15230 6fac5901167d53174f7a4cd948dc51f8 250 Gene3D G3DSA:3.30.2010.10 58 147 6.6E-9 T 15-10-2018 AM378_24010 5f8305781b98936529de2915275514ee 153 Gene3D G3DSA:3.40.630.30 9 153 2.4E-20 T 15-10-2018 AM378_24010 5f8305781b98936529de2915275514ee 153 Pfam PF00583 Acetyltransferase (GNAT) family 40 121 1.5E-10 T 15-10-2018 IPR000182 GNAT domain AM378_24010 5f8305781b98936529de2915275514ee 153 SUPERFAMILY SSF55729 13 151 6.98E-23 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase AM378_13340 950ef9c772a73c41fb7eaf76826667c3 249 SUPERFAMILY SSF48452 137 238 4.65E-6 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AM378_13340 950ef9c772a73c41fb7eaf76826667c3 249 Gene3D G3DSA:1.25.40.10 30 248 2.2E-39 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AM378_13340 950ef9c772a73c41fb7eaf76826667c3 249 TIGRFAM TIGR02521 type_IV_pilW: type IV pilus biogenesis/stability protein PilW 11 236 4.2E-76 T 15-10-2018 IPR013360 Pilus biogenesis/stability type IV, PilW AM378_13340 950ef9c772a73c41fb7eaf76826667c3 249 Pfam PF13432 Tetratricopeptide repeat 37 100 3.3E-5 T 15-10-2018 AM378_13340 950ef9c772a73c41fb7eaf76826667c3 249 Pfam PF13174 Tetratricopeptide repeat 139 169 0.019 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AM378_13340 950ef9c772a73c41fb7eaf76826667c3 249 SMART SM00028 67 100 5.3 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AM378_13340 950ef9c772a73c41fb7eaf76826667c3 249 SMART SM00028 137 170 0.031 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AM378_13340 950ef9c772a73c41fb7eaf76826667c3 249 SMART SM00028 33 66 0.0059 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AM378_13340 950ef9c772a73c41fb7eaf76826667c3 249 SUPERFAMILY SSF48452 37 170 3.2E-19 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AM378_02350 9b5d667222ea284444c1e4494e4de32f 195 Pfam PF16449 Fimbrillin MatB 26 193 2.5E-86 T 15-10-2018 IPR016514 Fimbrial protein EcpA AM378_02350 9b5d667222ea284444c1e4494e4de32f 195 Gene3D G3DSA:2.60.40.3290 11 195 1.3E-77 T 15-10-2018 IPR038478 Fimbrillin subunit EcpA superfamily AM378_02565 34e04beb929a9ad412ab88483d72f826 306 Gene3D G3DSA:1.10.3720.10 88 300 1.0E-24 T 15-10-2018 IPR035906 MetI-like superfamily AM378_02565 34e04beb929a9ad412ab88483d72f826 306 SUPERFAMILY SSF161098 91 289 6.93E-21 T 15-10-2018 IPR035906 MetI-like superfamily AM378_02565 34e04beb929a9ad412ab88483d72f826 306 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 113 304 1.9E-40 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AM378_05620 4e4b18e442921b22306ef1094c8ad994 334 SUPERFAMILY SSF81345 5 327 7.85E-88 T 15-10-2018 IPR037294 ABC transporter, BtuC-like AM378_05620 4e4b18e442921b22306ef1094c8ad994 334 Pfam PF01032 FecCD transport family 17 327 2.6E-95 T 15-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 AM378_05620 4e4b18e442921b22306ef1094c8ad994 334 Gene3D G3DSA:1.10.3470.10 4 333 1.5E-123 T 15-10-2018 IPR037294 ABC transporter, BtuC-like AM378_12230 d898a78c56fc88e5a7794590a20db7c7 369 Pfam PF10282 Lactonase, 7-bladed beta-propeller 12 367 1.7E-80 T 15-10-2018 IPR019405 Lactonase, 7-bladed beta propeller AM378_12230 d898a78c56fc88e5a7794590a20db7c7 369 Gene3D G3DSA:2.130.10.10 1 369 4.9E-90 T 15-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 AM378_12230 d898a78c56fc88e5a7794590a20db7c7 369 SUPERFAMILY SSF51004 31 351 1.96E-43 T 15-10-2018 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain superfamily AM378_04640 dad0e445d1c893dd6ff67fddc522e02d 306 Gene3D G3DSA:3.40.50.2300 24 292 9.1E-86 T 15-10-2018 AM378_04640 dad0e445d1c893dd6ff67fddc522e02d 306 Pfam PF13407 Periplasmic binding protein domain 24 282 6.8E-55 T 15-10-2018 IPR025997 Periplasmic binding protein AM378_04640 dad0e445d1c893dd6ff67fddc522e02d 306 Gene3D G3DSA:3.40.50.2300 127 296 9.1E-86 T 15-10-2018 AM378_04640 dad0e445d1c893dd6ff67fddc522e02d 306 SUPERFAMILY SSF53822 23 302 5.6E-77 T 15-10-2018 IPR028082 Periplasmic binding protein-like I AM378_15575 f726074b30b95ac0f3219d0a6439e267 140 Hamap MF_00651 Putative pre-16S rRNA nuclease [yqgF]. 4 139 25.266 T 15-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 AM378_15575 f726074b30b95ac0f3219d0a6439e267 140 TIGRFAM TIGR00250 RNAse_H_YqgF: putative transcription antitermination factor YqgF 7 136 1.0E-56 T 15-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 AM378_15575 f726074b30b95ac0f3219d0a6439e267 140 Gene3D G3DSA:3.30.420.140 2 138 5.6E-44 T 15-10-2018 IPR037027 YqgF/RNase H-like domain superfamily GO:0006139 AM378_15575 f726074b30b95ac0f3219d0a6439e267 140 SUPERFAMILY SSF53098 4 137 8.04E-41 T 15-10-2018 IPR012337 Ribonuclease H-like superfamily AM378_15575 f726074b30b95ac0f3219d0a6439e267 140 Pfam PF03652 Holliday junction resolvase 5 136 9.3E-41 T 15-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 AM378_15575 f726074b30b95ac0f3219d0a6439e267 140 SMART SM00732 4 104 2.9E-38 T 15-10-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 AM378_04925 8f54f3458ed57413177d928d47bf1afd 286 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 84 282 7.4E-19 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AM378_04925 8f54f3458ed57413177d928d47bf1afd 286 Gene3D G3DSA:1.10.3720.10 6 282 6.6E-53 T 15-10-2018 IPR035906 MetI-like superfamily AM378_04925 8f54f3458ed57413177d928d47bf1afd 286 SUPERFAMILY SSF161098 6 275 5.76E-54 T 15-10-2018 IPR035906 MetI-like superfamily AM378_08885 778671f0bb525ac92074913f66614d05 280 TIGRFAM TIGR00828 EIID-AGA: PTS system, mannose/fructose/sorbose family, IID component 8 278 3.1E-145 T 15-10-2018 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component GO:0009401|GO:0016021 AM378_08885 778671f0bb525ac92074913f66614d05 280 Pfam PF03613 PTS system mannose/fructose/sorbose family IID component 9 278 3.0E-112 T 15-10-2018 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component GO:0009401|GO:0016021 AM378_12830 1d3c787c17cf0031f8a288ff1910fcf2 287 Pfam PF04228 Putative neutral zinc metallopeptidase 1 284 2.7E-138 T 15-10-2018 IPR007343 Uncharacterised protein family, zinc metallopeptidase putative AM378_14135 d7e3ab6a89343960299cd770a010f946 187 Gene3D G3DSA:3.40.50.1000 4 187 5.2E-66 T 15-10-2018 IPR023214 HAD superfamily AM378_14135 d7e3ab6a89343960299cd770a010f946 187 TIGRFAM TIGR01656 Histidinol-ppas: histidinol-phosphate phosphatase domain 6 155 3.6E-39 T 15-10-2018 IPR006543 Histidinol-phosphate phosphatase GO:0016791 AM378_14135 d7e3ab6a89343960299cd770a010f946 187 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 7 156 5.1E-39 T 15-10-2018 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 AM378_14135 d7e3ab6a89343960299cd770a010f946 187 Pfam PF13242 HAD-hyrolase-like 109 177 9.2E-13 T 15-10-2018 AM378_14135 d7e3ab6a89343960299cd770a010f946 187 TIGRFAM TIGR00213 GmhB_yaeD: D,D-heptose 1,7-bisphosphate phosphatase 6 180 2.6E-93 T 15-10-2018 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase GO:0005975|GO:0016791 AM378_14135 d7e3ab6a89343960299cd770a010f946 187 PIRSF PIRSF004682 1 187 5.5E-65 T 15-10-2018 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase GO:0005975|GO:0016791 AM378_14135 d7e3ab6a89343960299cd770a010f946 187 SUPERFAMILY SSF56784 3 185 1.21E-53 T 15-10-2018 IPR036412 HAD-like superfamily AM378_16735 a5a5d1fd6e1fe83b6f271a0c06025bcb 262 Pfam PF01925 Sulfite exporter TauE/SafE 8 258 3.1E-34 T 15-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 AM378_12290 2fbef58021dd3fd771382902c66b6388 151 Pfam PF05656 Protein of unknown function (DUF805) 13 135 3.6E-8 T 15-10-2018 IPR008523 Protein of unknown function DUF805 GO:0016021 AM378_09375 8c8a68158f5d45fec966b2c9c37b1629 145 TIGRFAM TIGR03495 phage_LysB: phage lysis regulatory protein, LysB family 9 137 2.1E-35 T 15-10-2018 IPR020000 Bacteriophage P2, LysB AM378_01370 08f02d9184e8434509b7b74ab9a800a3 155 Gene3D G3DSA:3.90.1170.40 1 150 4.8E-55 T 15-10-2018 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 AM378_01370 08f02d9184e8434509b7b74ab9a800a3 155 Pfam PF02391 MoaE protein 10 121 6.6E-36 T 15-10-2018 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 AM378_01370 08f02d9184e8434509b7b74ab9a800a3 155 SUPERFAMILY SSF54690 5 150 2.35E-54 T 15-10-2018 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 AM378_04410 374a294e5df368e6d4cf2ae9cefee086 125 SUPERFAMILY SSF46785 19 123 1.74E-30 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM378_04410 374a294e5df368e6d4cf2ae9cefee086 125 Pfam PF01638 HxlR-like helix-turn-helix 31 120 6.3E-26 T 15-10-2018 IPR002577 Helix-turn-helix, HxlR type AM378_04410 374a294e5df368e6d4cf2ae9cefee086 125 Gene3D G3DSA:1.10.10.10 9 123 5.8E-35 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_10655 8a617ab151fac2c07447a89e51d908ae 227 Pfam PF03070 TENA/THI-4/PQQC family 19 225 2.1E-44 T 15-10-2018 IPR004305 Thiaminase-2/PQQC AM378_10655 8a617ab151fac2c07447a89e51d908ae 227 SUPERFAMILY SSF48613 10 223 3.86E-66 T 15-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 AM378_10655 8a617ab151fac2c07447a89e51d908ae 227 Gene3D G3DSA:1.20.910.10 6 227 6.5E-64 T 15-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 AM378_03200 56aad6d11c74182f5a1f2f4792a615ad 100 Pfam PF07214 Protein of unknown function (DUF1418) 1 93 6.4E-40 T 15-10-2018 IPR010815 Protein of unknown function DUF1418 AM378_16165 eb8613afe68899323c2819fb35ab416d 209 Pfam PF04717 Type VI secretion system, phage-baseplate injector 6 116 5.3E-46 T 15-10-2018 IPR006531 Gp5 N-terminal AM378_16165 eb8613afe68899323c2819fb35ab416d 209 Gene3D G3DSA:2.60.220.40 88 159 1.5E-31 T 15-10-2018 AM378_16165 eb8613afe68899323c2819fb35ab416d 209 TIGRFAM TIGR01644 phage_P2_V: phage baseplate assembly protein V 9 207 3.7E-64 T 15-10-2018 IPR013046 Phage baseplate assembly protein V/Gp45 AM378_16165 eb8613afe68899323c2819fb35ab416d 209 Gene3D G3DSA:2.40.50.230 1 86 7.0E-32 T 15-10-2018 IPR037026 Vgr protein, OB-fold domain superfamily AM378_08920 b8a4380948f7dfb98754daa2a805656e 344 SUPERFAMILY SSF56281 53 291 4.72E-39 T 15-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AM378_08920 b8a4380948f7dfb98754daa2a805656e 344 PIRSF PIRSF038896 2 329 5.1E-105 T 15-10-2018 IPR024884 N-acyl-phosphatidylethanolamine-hydrolysing phospholipase D GO:0008270|GO:0070290 Reactome: R-HSA-2466712 AM378_08920 b8a4380948f7dfb98754daa2a805656e 344 Pfam PF12706 Beta-lactamase superfamily domain 88 285 1.3E-45 T 15-10-2018 IPR001279 Metallo-beta-lactamase AM378_08920 b8a4380948f7dfb98754daa2a805656e 344 SMART SM00849 77 284 4.5E-4 T 15-10-2018 IPR001279 Metallo-beta-lactamase AM378_08920 b8a4380948f7dfb98754daa2a805656e 344 Gene3D G3DSA:3.60.15.10 50 340 6.7E-92 T 15-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AM378_13470 7161edb08bafdfac9b5ac7748c437ff1 342 SUPERFAMILY SSF52540 5 243 3.64E-84 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_13470 7161edb08bafdfac9b5ac7748c437ff1 342 SUPERFAMILY SSF50331 249 334 3.57E-9 T 15-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal AM378_13470 7161edb08bafdfac9b5ac7748c437ff1 342 Pfam PF08402 TOBE domain 257 336 1.4E-14 T 15-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 AM378_13470 7161edb08bafdfac9b5ac7748c437ff1 342 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM378_13470 7161edb08bafdfac9b5ac7748c437ff1 342 Gene3D G3DSA:3.40.50.300 3 303 2.7E-75 T 15-10-2018 AM378_13470 7161edb08bafdfac9b5ac7748c437ff1 342 SMART SM00382 29 212 2.5E-18 T 15-10-2018 IPR003593 AAA+ ATPase domain AM378_13470 7161edb08bafdfac9b5ac7748c437ff1 342 Pfam PF00005 ABC transporter 21 162 2.3E-32 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM378_15950 19981411ea59f9593032176a9429e8f8 275 Pfam PF00149 Calcineurin-like phosphoesterase 16 207 5.5E-20 T 15-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 AM378_15950 19981411ea59f9593032176a9429e8f8 275 Gene3D G3DSA:3.60.21.10 5 273 2.1E-72 T 15-10-2018 IPR029052 Metallo-dependent phosphatase-like AM378_15950 19981411ea59f9593032176a9429e8f8 275 Hamap MF_00905 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA [cpdA]. 15 261 40.527 T 15-10-2018 IPR026575 3,5-cyclic adenosine monophosphate phosphodiesterase CpdA GO:0004115 KEGG: 00230+3.1.4.53 AM378_15950 19981411ea59f9593032176a9429e8f8 275 ProDom PD587589 PHOSPHODIESTERASE ICC METALLOPHOSPHOESTERASE CYCLIC REGULATOR LACZ AMP HYDROLASE 3'5'-CYCLIC-NUCLEOTIDE EXPRESSION 206 261 6.0E-23 T 15-10-2018 IPR013622 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA, C-terminal KEGG: 00230+3.1.4.53 AM378_15950 19981411ea59f9593032176a9429e8f8 275 SUPERFAMILY SSF56300 16 273 3.12E-61 T 15-10-2018 AM378_20390 39a1311a2fd80d1e0fe0098e9d63b7a4 318 Pfam PF03547 Membrane transport protein 168 310 4.4E-14 T 15-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 AM378_20390 39a1311a2fd80d1e0fe0098e9d63b7a4 318 Pfam PF03547 Membrane transport protein 16 155 1.3E-12 T 15-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 AM378_05285 e74c6370991c5baee41cdceefa6c1116 79 ProDom PD060427 YEBV CYTOPLASMIC Y1856 ESCHERICHIA ECS2546 YPO1694 COLI STY1982 SIMILAR 3 78 3.0E-27 T 15-10-2018 IPR009950 Protein of unknown function DUF1480 AM378_05285 e74c6370991c5baee41cdceefa6c1116 79 Pfam PF07351 Protein of unknown function (DUF1480) 1 78 9.9E-43 T 15-10-2018 IPR009950 Protein of unknown function DUF1480 AM378_10820 88ecc5af67e24eaeb0d8fcfdb26e8bf7 182 TIGRFAM TIGR03124 citrate_citX: holo-ACP synthase CitX 14 176 1.4E-54 T 15-10-2018 IPR005551 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase GO:0051191 AM378_10820 88ecc5af67e24eaeb0d8fcfdb26e8bf7 182 Pfam PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase 14 177 1.5E-54 T 15-10-2018 IPR005551 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase GO:0051191 AM378_11870 76cf0890ac3869bc767c92d8b51540e4 459 Pfam PF03611 PTS system sugar-specific permease component 12 408 7.1E-150 T 15-10-2018 IPR004703 Phosphotransferase system, sugar-specific permease component GO:0009401|GO:0016021 AM378_01160 382456b09e60df387aa129d933846508 241 Pfam PF04973 Nicotinamide mononucleotide transporter 23 227 1.8E-53 T 15-10-2018 IPR006419 Nicotinamide mononucleotide transporter PnuC GO:0016020|GO:0034257|GO:0034258 AM378_01160 382456b09e60df387aa129d933846508 241 TIGRFAM TIGR01528 NMN_trans_PnuC: nicotinamide mononucleotide transporter PnuC 22 229 8.6E-65 T 15-10-2018 IPR006419 Nicotinamide mononucleotide transporter PnuC GO:0016020|GO:0034257|GO:0034258 AM378_18920 054a60548467200542118ed07c19befd 318 SUPERFAMILY SSF88713 3 181 3.89E-10 T 15-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 AM378_18920 054a60548467200542118ed07c19befd 318 Gene3D G3DSA:3.20.20.370 2 314 5.9E-23 T 15-10-2018 AM378_06530 9535325d5e0aeae8a3065fe20ad8ecd8 216 Gene3D G3DSA:3.40.430.10 2 195 5.1E-38 T 15-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 AM378_06530 9535325d5e0aeae8a3065fe20ad8ecd8 216 SUPERFAMILY SSF53597 2 198 2.36E-25 T 15-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 AM378_06530 9535325d5e0aeae8a3065fe20ad8ecd8 216 Pfam PF01872 RibD C-terminal domain 3 191 2.3E-24 T 15-10-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 AM378_10005 47054bf74225b966af18cba024a1ca97 628 PIRSF PIRSF028304 1 628 3.9E-185 T 15-10-2018 IPR010272 Type VI secretion system, TssF-like AM378_10005 47054bf74225b966af18cba024a1ca97 628 TIGRFAM TIGR03359 VI_chp_6: type VI secretion protein, TIGR03359 family 5 628 3.2E-192 T 15-10-2018 IPR010272 Type VI secretion system, TssF-like AM378_10005 47054bf74225b966af18cba024a1ca97 628 Pfam PF05947 Type VI secretion system, TssF 6 627 4.5E-225 T 15-10-2018 IPR010272 Type VI secretion system, TssF-like AM378_14180 a9262fc3a928dd94c77dba94ef4fe9ec 182 PIRSF PIRSF011484 1 181 9.4E-70 T 15-10-2018 IPR009822 YaeQ AM378_14180 a9262fc3a928dd94c77dba94ef4fe9ec 182 SUPERFAMILY SSF52980 2 178 2.95E-72 T 15-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 AM378_14180 a9262fc3a928dd94c77dba94ef4fe9ec 182 SMART SM01322 1 176 5.9E-120 T 15-10-2018 IPR009822 YaeQ AM378_14180 a9262fc3a928dd94c77dba94ef4fe9ec 182 Gene3D G3DSA:3.10.640.10 1 181 3.7E-76 T 15-10-2018 IPR038590 YaeQ superfamily AM378_14180 a9262fc3a928dd94c77dba94ef4fe9ec 182 Pfam PF07152 YaeQ protein 1 173 1.6E-75 T 15-10-2018 IPR009822 YaeQ AM378_22415 5eb667512a1c3d0e9892abf1435c6295 201 Pfam PF13689 Domain of unknown function (DUF4154) 59 195 3.9E-31 T 15-10-2018 IPR025293 YfiR-like AM378_07745 ef4525f3731ed600e93f26162b129800 119 TIGRFAM TIGR02978 phageshock_pspC: phage shock protein C 7 119 2.1E-40 T 15-10-2018 IPR014320 Phage shock protein, PspC AM378_07745 ef4525f3731ed600e93f26162b129800 119 Pfam PF04024 PspC domain 8 67 2.9E-17 T 15-10-2018 IPR007168 Phage shock protein, PspC, N-terminal AM378_01740 6b74aa8e9e376d047c35d9c54c5fe134 196 Pfam PF01810 LysE type translocator 14 193 2.1E-19 T 15-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AM378_12235 1f34685e4c4608359de7636d46cec238 266 SUPERFAMILY SSF46689 6 56 3.81E-9 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AM378_12235 1f34685e4c4608359de7636d46cec238 266 SUPERFAMILY SSF46689 59 110 1.84E-10 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AM378_12235 1f34685e4c4608359de7636d46cec238 266 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 59 101 - T 15-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AM378_12235 1f34685e4c4608359de7636d46cec238 266 Gene3D G3DSA:3.20.80.10 180 266 1.7E-13 T 15-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily AM378_12235 1f34685e4c4608359de7636d46cec238 266 Pfam PF14526 Integron-associated effector binding protein 199 265 1.0E-7 T 15-10-2018 IPR029441 Integron-associated effector binding protein AM378_12235 1f34685e4c4608359de7636d46cec238 266 Gene3D G3DSA:1.10.10.60 59 120 8.5E-15 T 15-10-2018 AM378_12235 1f34685e4c4608359de7636d46cec238 266 SMART SM00342 22 105 1.0E-24 T 15-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM378_12235 1f34685e4c4608359de7636d46cec238 266 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 89 105 2.5E-5 T 15-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM378_12235 1f34685e4c4608359de7636d46cec238 266 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 74 89 2.5E-5 T 15-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM378_12235 1f34685e4c4608359de7636d46cec238 266 Gene3D G3DSA:1.10.10.60 3 58 1.4E-19 T 15-10-2018 AM378_12235 1f34685e4c4608359de7636d46cec238 266 SUPERFAMILY SSF55136 199 265 1.13E-9 T 15-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily AM378_12235 1f34685e4c4608359de7636d46cec238 266 Pfam PF12833 Helix-turn-helix domain 32 106 2.7E-19 T 15-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM378_18845 8523d6fd64550b42a78617816045771f 156 SUPERFAMILY SSF54611 3 141 2.01E-53 T 15-10-2018 IPR035958 SecB-like superfamily AM378_18845 8523d6fd64550b42a78617816045771f 156 Gene3D G3DSA:3.10.420.10 1 153 4.5E-63 T 15-10-2018 IPR035958 SecB-like superfamily AM378_18845 8523d6fd64550b42a78617816045771f 156 Pfam PF02556 Preprotein translocase subunit SecB 5 144 3.8E-58 T 15-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 AM378_18845 8523d6fd64550b42a78617816045771f 156 Hamap MF_00821 Protein-export protein SecB [secB]. 1 145 33.903 T 15-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 AM378_18845 8523d6fd64550b42a78617816045771f 156 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 13 30 7.2E-42 T 15-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 AM378_18845 8523d6fd64550b42a78617816045771f 156 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 123 141 7.2E-42 T 15-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 AM378_18845 8523d6fd64550b42a78617816045771f 156 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 73 93 7.2E-42 T 15-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 AM378_18845 8523d6fd64550b42a78617816045771f 156 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 97 119 7.2E-42 T 15-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 AM378_18845 8523d6fd64550b42a78617816045771f 156 TIGRFAM TIGR00809 secB: protein-export chaperone SecB 6 146 4.0E-69 T 15-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 AM378_16335 2558a50edd63c93df5b592ebd91b51f8 413 Pfam PF03222 Tryptophan/tyrosine permease family 23 378 1.0E-31 T 15-10-2018 IPR018227 Amino acid/polyamine transporter 2 GO:0003333 AM378_16335 2558a50edd63c93df5b592ebd91b51f8 413 Gene3D G3DSA:1.20.1740.10 20 409 1.8E-12 T 15-10-2018 AM378_17625 aeb11b99c44430964a687a60cf0b11ee 67 TIGRFAM TIGR02443 TIGR02443: conserved hypothetical protein 4 61 4.2E-30 T 15-10-2018 IPR012658 Conserved hypothetical protein CHP02443 AM378_17625 aeb11b99c44430964a687a60cf0b11ee 67 Pfam PF09526 Probable metal-binding protein (DUF2387) 4 55 2.0E-21 T 15-10-2018 IPR012658 Conserved hypothetical protein CHP02443 AM378_08945 e64e6f199c443224ea2b34b2f066de44 135 Gene3D G3DSA:3.10.180.10 1 135 7.4E-41 T 15-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AM378_08945 e64e6f199c443224ea2b34b2f066de44 135 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 4 112 1.7E-12 T 15-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AM378_08945 e64e6f199c443224ea2b34b2f066de44 135 SUPERFAMILY SSF54593 1 129 1.61E-30 T 15-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AM378_03225 2ff82969df8152c97a5a9d419c68e6e0 320 SUPERFAMILY SSF161098 32 311 2.24E-55 T 15-10-2018 IPR035906 MetI-like superfamily AM378_03225 2ff82969df8152c97a5a9d419c68e6e0 320 Gene3D G3DSA:1.10.3720.10 31 315 3.4E-54 T 15-10-2018 IPR035906 MetI-like superfamily AM378_03225 2ff82969df8152c97a5a9d419c68e6e0 320 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 120 316 3.1E-23 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AM378_16745 3d42819fd6ebdc924a8a49ecd25d9905 484 SUPERFAMILY SSF51905 1 228 1.94E-12 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AM378_16745 3d42819fd6ebdc924a8a49ecd25d9905 484 Pfam PF13454 FAD-NAD(P)-binding 6 157 2.4E-24 T 15-10-2018 IPR038732 FAD-dependent urate hydroxylase HpyO, FAD/NAD(P)-binding domain AM378_16745 3d42819fd6ebdc924a8a49ecd25d9905 484 Gene3D G3DSA:3.50.50.60 2 275 5.3E-8 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AM378_08045 b01023e8c349a2d8187f8b592b3f5f19 83 Gene3D G3DSA:1.10.1900.30 9 77 3.5E-38 T 15-10-2018 IPR038191 YciN superfamily AM378_08045 b01023e8c349a2d8187f8b592b3f5f19 83 Pfam PF10692 Protein of unknown function (DUF2498) 5 81 3.3E-44 T 15-10-2018 IPR019633 Protein of unknown function DUF2498 AM378_23870 6285f0da60feef56ff02dfb68c7ef582 212 PIRSF PIRSF006324 5 212 1.7E-52 T 15-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AM378_23870 6285f0da60feef56ff02dfb68c7ef582 212 Pfam PF01810 LysE type translocator 19 209 7.5E-48 T 15-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AM378_10515 cc5af7748a0502e45cc5db38644d96ac 181 SUPERFAMILY SSF49401 35 180 1.09E-32 T 15-10-2018 IPR008966 Adhesion domain superfamily AM378_10515 cc5af7748a0502e45cc5db38644d96ac 181 Gene3D G3DSA:2.60.40.1090 46 180 9.6E-29 T 15-10-2018 IPR036937 Fimbrial-type adhesion domain superfamily GO:0007155|GO:0009289 AM378_06515 d8d9f416fc4db176cc0994d2401d047a 173 Pfam PF02417 Chromate transporter 8 169 5.0E-32 T 15-10-2018 IPR003370 Chromate transporter GO:0015109|GO:0015703 AM378_16720 707e26e521b97769fb8e7a86029b9a8d 121 TIGRFAM TIGR03577 EF_0830: conserved hypothetical protein EF_0830/AHA_3911 4 118 1.9E-67 T 15-10-2018 IPR020034 Conserved hypothetical protein CHP03577, EF0830/AHA3911 AM378_16720 707e26e521b97769fb8e7a86029b9a8d 121 Pfam PF14272 Glycine-rich SFCGS 4 117 4.9E-61 T 15-10-2018 IPR020034 Conserved hypothetical protein CHP03577, EF0830/AHA3911 AM378_04260 41ed9701c015a3b40f41d853f59ede50 38 Pfam PF10968 Protein of unknown function (DUF2770) 2 36 4.0E-18 T 15-10-2018 IPR024494 Protein of unknown function DUF2770 AM378_16400 2c1fd53e3f86b83b3adec93cf5a17f1a 470 SUPERFAMILY SSF51556 3 465 6.94E-180 T 15-10-2018 IPR032466 Metal-dependent hydrolase AM378_16400 2c1fd53e3f86b83b3adec93cf5a17f1a 470 Pfam PF02614 Glucuronate isomerase 1 465 7.8E-224 T 15-10-2018 IPR003766 Uronate isomerase GO:0006064|GO:0008880 KEGG: 00040+5.3.1.12|MetaCyc: PWY-7247|MetaCyc: PWY-7248 AM378_16400 2c1fd53e3f86b83b3adec93cf5a17f1a 470 Gene3D G3DSA:1.10.2020.10 46 137 6.1E-198 T 15-10-2018 AM378_16400 2c1fd53e3f86b83b3adec93cf5a17f1a 470 Gene3D G3DSA:3.20.20.140 7 465 6.1E-198 T 15-10-2018 AM378_16400 2c1fd53e3f86b83b3adec93cf5a17f1a 470 Hamap MF_00675 Uronate isomerase [uxaC]. 2 467 48.936 T 15-10-2018 IPR003766 Uronate isomerase GO:0006064|GO:0008880 KEGG: 00040+5.3.1.12|MetaCyc: PWY-7247|MetaCyc: PWY-7248 AM378_16740 7dcf90fcc164609bee7459bacae310ac 293 SUPERFAMILY SSF53328 69 227 2.75E-21 T 15-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AM378_16740 7dcf90fcc164609bee7459bacae310ac 293 Pfam PF00551 Formyl transferase 123 189 4.1E-9 T 15-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AM378_16740 7dcf90fcc164609bee7459bacae310ac 293 Gene3D G3DSA:3.40.50.12230 67 241 2.3E-19 T 15-10-2018 AM378_02295 ea0ff63a9edcfb2674742cd8a7441a42 419 Pfam PF17042 Putative nucleotide-binding of sugar-metabolising enzyme 252 410 5.7E-41 T 15-10-2018 IPR031475 Four-carbon acid sugar kinase, C-terminal domain AM378_02295 ea0ff63a9edcfb2674742cd8a7441a42 419 SUPERFAMILY SSF142764 3 415 3.01E-127 T 15-10-2018 AM378_02295 ea0ff63a9edcfb2674742cd8a7441a42 419 Gene3D G3DSA:3.40.980.20 242 419 2.1E-60 T 15-10-2018 AM378_02295 ea0ff63a9edcfb2674742cd8a7441a42 419 Pfam PF07005 Putative sugar-binding N-terminal domain 3 226 6.2E-69 T 15-10-2018 IPR010737 Four-carbon acid sugar kinase, N-terminal domain AM378_02295 ea0ff63a9edcfb2674742cd8a7441a42 419 Gene3D G3DSA:3.40.50.10840 1 234 2.9E-87 T 15-10-2018 IPR037051 Four-carbon acid sugar kinase, N-terminal domain superfamily AM378_06160 713af054e1de7745fc74ba01b1c1fad8 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 2.8E-22 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_06160 713af054e1de7745fc74ba01b1c1fad8 296 Gene3D G3DSA:1.10.10.10 1 86 1.7E-30 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_06160 713af054e1de7745fc74ba01b1c1fad8 296 Pfam PF03466 LysR substrate binding domain 91 294 6.2E-46 T 15-10-2018 IPR005119 LysR, substrate-binding AM378_06160 713af054e1de7745fc74ba01b1c1fad8 296 SUPERFAMILY SSF46785 4 88 3.41E-24 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM378_06160 713af054e1de7745fc74ba01b1c1fad8 296 Gene3D G3DSA:3.40.190.10 165 272 5.8E-59 T 15-10-2018 AM378_06160 713af054e1de7745fc74ba01b1c1fad8 296 Gene3D G3DSA:3.40.190.10 90 286 5.8E-59 T 15-10-2018 AM378_06160 713af054e1de7745fc74ba01b1c1fad8 296 SUPERFAMILY SSF53850 93 295 7.82E-41 T 15-10-2018 AM378_06160 713af054e1de7745fc74ba01b1c1fad8 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 6.9E-9 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_06160 713af054e1de7745fc74ba01b1c1fad8 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 6.9E-9 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_06160 713af054e1de7745fc74ba01b1c1fad8 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 6.9E-9 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_17610 5dbd45f3f9d7bea816df41ae2af3ae75 479 Pfam PF03553 Na+/H+ antiporter family 159 463 6.1E-54 T 15-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 AM378_17610 5dbd45f3f9d7bea816df41ae2af3ae75 479 TIGRFAM TIGR00931 antiport_nhaC: Na+/H+ antiporter NhaC 11 469 5.6E-156 T 15-10-2018 IPR004770 Na+/H+ antiporter NhaC GO:0015297|GO:0016021 AM378_12560 a408a94caffba3bd846316895f1dd4de 332 PIRSF PIRSF026166 1 331 3.0E-130 T 15-10-2018 IPR016833 Putative sodium bile acid cotransporter AM378_12560 a408a94caffba3bd846316895f1dd4de 332 Pfam PF13593 SBF-like CPA transporter family (DUF4137) 6 314 1.6E-98 T 15-10-2018 IPR016833 Putative sodium bile acid cotransporter AM378_12560 a408a94caffba3bd846316895f1dd4de 332 Gene3D G3DSA:1.20.1530.20 4 321 6.0E-35 T 15-10-2018 IPR038770 Sodium/solute symporter superfamily AM378_12195 611f595269795688031ed4f8bb410f00 164 SUPERFAMILY SSF82093 30 143 7.32E-41 T 15-10-2018 IPR036127 CcmE-like superfamily GO:0005886|GO:0017003|GO:0017004 AM378_12195 611f595269795688031ed4f8bb410f00 164 Pfam PF03100 CcmE 4 137 5.4E-45 T 15-10-2018 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004|GO:0020037 AM378_12195 611f595269795688031ed4f8bb410f00 164 Hamap MF_01959 Cytochrome c-type biogenesis protein CcmE [ccmE]. 2 147 32.319 T 15-10-2018 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004|GO:0020037 AM378_12195 611f595269795688031ed4f8bb410f00 164 Gene3D G3DSA:2.40.50.140 30 143 4.0E-43 T 15-10-2018 AM378_15170 9a715a3cf30993b681ff7bad91cd74ec 449 ProSitePatterns PS00217 Sugar transport proteins signature 2. 120 145 - T 15-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AM378_15170 9a715a3cf30993b681ff7bad91cd74ec 449 SUPERFAMILY SSF103473 10 438 4.71E-80 T 15-10-2018 IPR036259 MFS transporter superfamily AM378_15170 9a715a3cf30993b681ff7bad91cd74ec 449 Gene3D G3DSA:1.20.1250.20 19 433 3.5E-70 T 15-10-2018 AM378_15170 9a715a3cf30993b681ff7bad91cd74ec 449 Pfam PF07690 Major Facilitator Superfamily 29 310 1.0E-34 T 15-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM378_01085 aa7cf6832da46f74d317378391482fe9 142 Gene3D G3DSA:3.30.420.270 60 133 8.8E-24 T 15-10-2018 AM378_01085 aa7cf6832da46f74d317378391482fe9 142 Hamap MF_02203 Tol-Pal system protein TolR [tolR]. 6 140 28.018 T 15-10-2018 IPR014168 Tol-Pal system protein TolR GO:0015031|GO:0016021 AM378_01085 aa7cf6832da46f74d317378391482fe9 142 Pfam PF02472 Biopolymer transport protein ExbD/TolR 10 141 2.2E-24 T 15-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 AM378_08070 86f81ef2f17adf25c74dcefd54ff45c9 265 Gene3D G3DSA:3.40.50.1820 20 262 2.1E-82 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold AM378_08070 86f81ef2f17adf25c74dcefd54ff45c9 265 SUPERFAMILY SSF53474 3 264 8.11E-30 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold AM378_08070 86f81ef2f17adf25c74dcefd54ff45c9 265 Gene3D G3DSA:1.10.210.20 124 193 2.1E-82 T 15-10-2018 AM378_08070 86f81ef2f17adf25c74dcefd54ff45c9 265 Pfam PF00561 alpha/beta hydrolase fold 23 156 2.8E-13 T 15-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AM378_02840 1048d5286de4974c742c5160a6f27e45 293 Pfam PF04321 RmlD substrate binding domain 1 286 1.6E-89 T 15-10-2018 IPR029903 RmlD-like substrate binding domain Reactome: R-HSA-156581|Reactome: R-HSA-5689880 AM378_02840 1048d5286de4974c742c5160a6f27e45 293 TIGRFAM TIGR01214 rmlD: dTDP-4-dehydrorhamnose reductase 2 285 6.9E-82 T 15-10-2018 IPR005913 dTDP-4-dehydrorhamnose reductase family Reactome: R-HSA-156581|Reactome: R-HSA-5689880 AM378_02840 1048d5286de4974c742c5160a6f27e45 293 SUPERFAMILY SSF51735 1 286 4.63E-88 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily AM378_02840 1048d5286de4974c742c5160a6f27e45 293 Gene3D G3DSA:3.90.25.10 159 281 5.3E-91 T 15-10-2018 AM378_02840 1048d5286de4974c742c5160a6f27e45 293 Gene3D G3DSA:3.40.50.720 3 274 5.3E-91 T 15-10-2018 AM378_22505 dc95374a6871e4604cc6beed2499e13b 265 Pfam PF01184 GPR1/FUN34/yaaH family 68 247 2.0E-42 T 15-10-2018 IPR000791 Acetate transporter GPR1/FUN34/SatP family GO:0016021 AM378_06425 6dc2711c71b042cb78f37d23f4d5ff51 297 SUPERFAMILY SSF46785 6 113 2.65E-19 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM378_06425 6dc2711c71b042cb78f37d23f4d5ff51 297 Gene3D G3DSA:3.40.190.290 92 293 1.0E-52 T 15-10-2018 AM378_06425 6dc2711c71b042cb78f37d23f4d5ff51 297 SUPERFAMILY SSF53850 90 294 2.9E-38 T 15-10-2018 AM378_06425 6dc2711c71b042cb78f37d23f4d5ff51 297 Pfam PF03466 LysR substrate binding domain 89 292 4.6E-34 T 15-10-2018 IPR005119 LysR, substrate-binding AM378_06425 6dc2711c71b042cb78f37d23f4d5ff51 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 63 2.4E-16 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_06425 6dc2711c71b042cb78f37d23f4d5ff51 297 Gene3D G3DSA:1.10.10.10 1 84 9.1E-20 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_00290 34873a88a04582509ed9dad75effb259 421 Pfam PF02447 GntP family permease 9 414 4.6E-23 T 15-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 AM378_08935 bc51db6a90cf29fddf61d264b6f14e93 78 Pfam PF13269 Protein of unknown function (DUF4060) 3 75 1.4E-38 T 15-10-2018 IPR025135 Protein of unknown function DUF4060 AM378_21640 130ae747037f46bceefd7d7f70ee4041 254 PIRSF PIRSF020736 1 253 2.8E-91 T 15-10-2018 IPR010386 tRNA-hydroxylase MiaE GO:0006400|GO:0045301 AM378_21640 130ae747037f46bceefd7d7f70ee4041 254 Pfam PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) 6 248 1.9E-107 T 15-10-2018 IPR010386 tRNA-hydroxylase MiaE GO:0006400|GO:0045301 AM378_21640 130ae747037f46bceefd7d7f70ee4041 254 SUPERFAMILY SSF47240 7 251 4.24E-74 T 15-10-2018 IPR009078 Ferritin-like superfamily AM378_21640 130ae747037f46bceefd7d7f70ee4041 254 Gene3D G3DSA:1.20.1260.10 3 80 4.8E-17 T 15-10-2018 IPR012347 Ferritin-like AM378_21640 130ae747037f46bceefd7d7f70ee4041 254 Gene3D G3DSA:1.20.1260.10 102 254 1.9E-55 T 15-10-2018 IPR012347 Ferritin-like AM378_20330 aefbeed508e5dbf70863c78ee6bed9c4 130 Gene3D G3DSA:3.40.630.30 1 130 1.2E-39 T 15-10-2018 AM378_20330 aefbeed508e5dbf70863c78ee6bed9c4 130 Pfam PF12568 Acetyltransferase (GNAT) domain 2 129 7.8E-55 T 15-10-2018 IPR000182 GNAT domain AM378_20330 aefbeed508e5dbf70863c78ee6bed9c4 130 Hamap MF_02018 PanD regulatory factor [panZ]. 1 130 34.369 T 15-10-2018 IPR032900 PanD regulatory factor PanZ GO:0015940|GO:0031638 AM378_20330 aefbeed508e5dbf70863c78ee6bed9c4 130 SUPERFAMILY SSF55729 15 126 1.12E-10 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase AM378_14410 80a2a5ddb2f4e7a283082a3b4e7adfa8 74 Gene3D G3DSA:2.30.30.100 19 74 2.4E-29 T 15-10-2018 AM378_14410 80a2a5ddb2f4e7a283082a3b4e7adfa8 74 SUPERFAMILY SSF50182 21 71 4.69E-20 T 15-10-2018 IPR010920 LSM domain superfamily AM378_14410 80a2a5ddb2f4e7a283082a3b4e7adfa8 74 Pfam PF06004 Bacterial protein of unknown function (DUF903) 23 71 3.1E-26 T 15-10-2018 IPR010305 Protein of unknown function DUF903 AM378_15745 04c8b4eb742ce19877cef054a9b1157f 136 Pfam PF00583 Acetyltransferase (GNAT) family 31 114 9.8E-14 T 15-10-2018 IPR000182 GNAT domain AM378_15745 04c8b4eb742ce19877cef054a9b1157f 136 Gene3D G3DSA:3.40.630.30 35 136 3.7E-28 T 15-10-2018 AM378_15745 04c8b4eb742ce19877cef054a9b1157f 136 SUPERFAMILY SSF55729 33 136 1.64E-26 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase AM378_00990 a0d0236917f84a88c9a2f63e1b25d80a 339 Pfam PF06166 Protein of unknown function (DUF979) 6 338 4.3E-130 T 15-10-2018 IPR009323 Protein of unknown function DUF979 AM378_10445 f95467fcade69a26f5635381eccfe22f 329 Gene3D G3DSA:3.20.20.100 1 328 9.0E-119 T 15-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily AM378_10445 f95467fcade69a26f5635381eccfe22f 329 Pfam PF00248 Aldo/keto reductase family 16 308 1.3E-75 T 15-10-2018 IPR023210 NADP-dependent oxidoreductase domain AM378_10445 f95467fcade69a26f5635381eccfe22f 329 SUPERFAMILY SSF51430 1 314 2.1E-101 T 15-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily AM378_12165 8564e408a86c3d4b1a9fe81ffd780ee1 440 SUPERFAMILY SSF56935 26 440 1.42E-109 T 15-10-2018 AM378_12165 8564e408a86c3d4b1a9fe81ffd780ee1 440 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 17 440 7.5E-145 T 15-10-2018 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) AM378_12165 8564e408a86c3d4b1a9fe81ffd780ee1 440 Gene3D G3DSA:2.40.160.60 26 440 1.7E-152 T 15-10-2018 AM378_00130 d865b9ea826ed8aadeb678c0ed381519 115 TIGRFAM TIGR01707 gspI: type II secretion system protein I 1 98 4.3E-26 T 15-10-2018 IPR010052 Type II secretion system protein I GO:0008565|GO:0015627|GO:0015628 AM378_00130 d865b9ea826ed8aadeb678c0ed381519 115 Gene3D G3DSA:3.30.1300.30 26 113 4.7E-26 T 15-10-2018 AM378_00130 d865b9ea826ed8aadeb678c0ed381519 115 SUPERFAMILY SSF54523 32 112 1.14E-22 T 15-10-2018 AM378_00130 d865b9ea826ed8aadeb678c0ed381519 115 Pfam PF02501 Type II secretion system (T2SS), protein I 34 111 7.8E-24 T 15-10-2018 IPR003413 Type II secretion system protein I domain GO:0008565|GO:0015627|GO:0015628 AM378_08525 93347cb9e38cd58f1a725b7a74f75fe6 216 Pfam PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment 37 216 6.6E-83 T 15-10-2018 IPR015304 ZinT domain GO:0008270 AM378_08525 93347cb9e38cd58f1a725b7a74f75fe6 216 Gene3D G3DSA:2.40.128.20 31 216 1.0E-79 T 15-10-2018 IPR012674 Calycin AM378_08525 93347cb9e38cd58f1a725b7a74f75fe6 216 SUPERFAMILY SSF50814 31 216 9.02E-76 T 15-10-2018 IPR012674 Calycin AM378_16215 b6326178b0c46d55ad2110a6eb0d2ad3 394 Pfam PF05125 Phage major capsid protein, P2 family 8 340 2.4E-145 T 15-10-2018 IPR006441 Bacteriophage P2, GpN, major capsid AM378_16215 b6326178b0c46d55ad2110a6eb0d2ad3 394 TIGRFAM TIGR01551 major_capsid_P2: phage major capsid protein, P2 family 7 341 5.9E-94 T 15-10-2018 IPR006441 Bacteriophage P2, GpN, major capsid AM378_21170 99cf12b8af6c7a5e325834e756cfdeb6 185 Gene3D G3DSA:3.40.30.10 39 182 2.1E-6 T 15-10-2018 AM378_21170 99cf12b8af6c7a5e325834e756cfdeb6 185 Pfam PF09695 Bacterial protein of unknown function (YtfJ_HI0045) 24 181 3.8E-79 T 15-10-2018 IPR006513 Conserved hypothetical protein CHP01626, YtfJ AM378_21170 99cf12b8af6c7a5e325834e756cfdeb6 185 TIGRFAM TIGR01626 ytfJ_HI0045: conserved hypothetical protein YtfJ-family, TIGR01626 1 183 1.0E-83 T 15-10-2018 IPR006513 Conserved hypothetical protein CHP01626, YtfJ AM378_12885 caf4793d936631f1ef8567bad758f485 205 Pfam PF01810 LysE type translocator 15 201 1.7E-22 T 15-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AM378_19080 db1f8d2a1c1aa8a6af1cad4069f66557 297 Pfam PF03631 Virulence factor BrkB 30 276 7.9E-59 T 15-10-2018 IPR017039 Virulence factor BrkB AM378_19080 db1f8d2a1c1aa8a6af1cad4069f66557 297 TIGRFAM TIGR00765 yihY_not_rbn: YihY family inner membrane protein 19 277 2.9E-94 T 15-10-2018 IPR017039 Virulence factor BrkB AM378_19080 db1f8d2a1c1aa8a6af1cad4069f66557 297 PIRSF PIRSF035875 1 297 2.0E-67 T 15-10-2018 IPR017039 Virulence factor BrkB AM378_19080 db1f8d2a1c1aa8a6af1cad4069f66557 297 Hamap MF_00672 UPF0761 membrane protein YihY [yihY]. 4 283 23.665 T 15-10-2018 IPR023679 Uncharacterised protein family UPF0761, bacterial AM378_21435 c7919fcf30421d394be979f2f18e066c 331 ProSitePatterns PS01276 Peptidase family U32 signature. 161 179 - T 15-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 AM378_21435 c7919fcf30421d394be979f2f18e066c 331 Pfam PF01136 Peptidase family U32 76 330 4.4E-66 T 15-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 AM378_21435 c7919fcf30421d394be979f2f18e066c 331 SUPERFAMILY SSF51391 11 161 2.2E-5 T 15-10-2018 IPR036206 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 AM378_21435 c7919fcf30421d394be979f2f18e066c 331 Gene3D G3DSA:3.20.20.150 10 134 1.7E-5 T 15-10-2018 AM378_03870 576fa80f93001ea1400d12d0c7c93ed1 486 Pfam PF02386 Cation transport protein 42 480 1.1E-96 T 15-10-2018 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 AM378_03870 576fa80f93001ea1400d12d0c7c93ed1 486 TIGRFAM TIGR00933 2a38: potassium uptake protein, TrkH family 87 469 2.3E-106 T 15-10-2018 IPR004772 TrkH potassium transport family GO:0015379|GO:0016021|GO:0071805 AM378_03870 576fa80f93001ea1400d12d0c7c93ed1 486 PIRSF PIRSF006247 2 486 1.4E-162 T 15-10-2018 IPR004772 TrkH potassium transport family GO:0015379|GO:0016021|GO:0071805 AM378_06650 e7f82b90038ae51b98e123fb843401a9 156 Pfam PF02082 Transcriptional regulator 3 82 1.0E-23 T 15-10-2018 IPR000944 Transcription regulator Rrf2-type AM378_06650 e7f82b90038ae51b98e123fb843401a9 156 Gene3D G3DSA:1.10.10.10 1 141 5.4E-43 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_06650 e7f82b90038ae51b98e123fb843401a9 156 SUPERFAMILY SSF46785 4 137 1.03E-30 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM378_03150 256d859feb3899ee3b62c83708ef82b8 589 Pfam PF10592 AIPR protein 257 519 4.1E-45 T 15-10-2018 IPR018891 Abortive bacteriophage infection, resistance AM378_10760 7d28df7c0e787387ef8be402a2ab7331 302 ProDom PD024016 LIPOPOLYSACCHARIDE BIOSYNTHESIS CORE RFAZ WAAZ 68 301 5.0E-8 T 15-10-2018 AM378_12175 6efcefbf4b58934e7289c7033bc3c736 404 SUPERFAMILY SSF48452 160 268 1.96E-20 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AM378_12175 6efcefbf4b58934e7289c7033bc3c736 404 TIGRFAM TIGR03142 cytochro_ccmI: cytochrome c-type biogenesis protein CcmI 2 111 4.3E-28 T 15-10-2018 IPR017560 Cytochrome c-type biogenesis protein CcmI AM378_12175 6efcefbf4b58934e7289c7033bc3c736 404 Pfam PF14559 Tetratricopeptide repeat 174 241 2.8E-12 T 15-10-2018 AM378_12175 6efcefbf4b58934e7289c7033bc3c736 404 Gene3D G3DSA:1.25.40.10 151 294 9.6E-22 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AM378_23670 3ccbde5ed0b7419723f3fcf3d23ecce9 181 Pfam PF10554 Ash protein family 21 130 6.3E-29 T 15-10-2018 IPR018880 Bacteriophage P4, Ash protein AM378_12060 be94993cc33386bb22b7c969368a1a9c 342 PIRSF PIRSF020588 1 341 6.1E-145 T 15-10-2018 IPR023597 Flagellar regulator Flk GO:0010468|GO:0031224 AM378_10295 7ea5c37abec09de88d812ae9452a27d6 139 SUPERFAMILY SSF54593 2 138 6.22E-35 T 15-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AM378_10295 7ea5c37abec09de88d812ae9452a27d6 139 Pfam PF06983 3-demethylubiquinone-9 3-methyltransferase 4 136 1.4E-9 T 15-10-2018 IPR028973 PhnB-like AM378_10295 7ea5c37abec09de88d812ae9452a27d6 139 Gene3D G3DSA:3.10.180.10 7 139 9.2E-49 T 15-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AM378_06640 ef45e98361df8584fd684728eaf43d1a 70 Pfam PF05433 Glycine zipper 2TM domain 32 67 2.4E-8 T 15-10-2018 IPR008816 Glycine zipper 2TM domain GO:0019867 AM378_07640 b305292b0200a6a8ff2147725e26f3be 96 Pfam PF03992 Antibiotic biosynthesis monooxygenase 1 75 4.8E-19 T 15-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain AM378_07640 b305292b0200a6a8ff2147725e26f3be 96 Gene3D G3DSA:3.30.70.100 1 91 1.9E-21 T 15-10-2018 AM378_07640 b305292b0200a6a8ff2147725e26f3be 96 SUPERFAMILY SSF54909 1 94 1.88E-23 T 15-10-2018 IPR011008 Dimeric alpha-beta barrel AM378_00075 b10d345ae302d545e348f86771768c0c 104 SUPERFAMILY SSF46767 7 88 1.31E-25 T 15-10-2018 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain Reactome: R-HSA-5657655 AM378_00075 b10d345ae302d545e348f86771768c0c 104 Gene3D G3DSA:1.10.10.10 6 104 1.9E-35 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_00075 b10d345ae302d545e348f86771768c0c 104 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 8 87 7.3E-27 T 15-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 AM378_00075 b10d345ae302d545e348f86771768c0c 104 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 7 82 2.9E-15 T 15-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 AM378_02865 c5bde5f5f1a8c3a9d1a895ac080f967d 414 Pfam PF00534 Glycosyl transferases group 1 219 309 2.7E-9 T 15-10-2018 IPR001296 Glycosyl transferase, family 1 AM378_02865 c5bde5f5f1a8c3a9d1a895ac080f967d 414 Gene3D G3DSA:3.40.50.2000 2 157 3.8E-6 T 15-10-2018 AM378_02865 c5bde5f5f1a8c3a9d1a895ac080f967d 414 Gene3D G3DSA:3.40.50.2000 158 334 6.7E-14 T 15-10-2018 AM378_02865 c5bde5f5f1a8c3a9d1a895ac080f967d 414 SUPERFAMILY SSF53756 4 335 1.15E-30 T 15-10-2018 AM378_05175 dde07dd7dbe15ffdc1a514eed0734a4d 297 SUPERFAMILY SSF103481 196 293 9.02E-9 T 15-10-2018 AM378_05175 dde07dd7dbe15ffdc1a514eed0734a4d 297 Pfam PF00892 EamA-like transporter family 10 140 3.5E-7 T 15-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AM378_05175 dde07dd7dbe15ffdc1a514eed0734a4d 297 Pfam PF00892 EamA-like transporter family 165 289 6.1E-8 T 15-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AM378_05175 dde07dd7dbe15ffdc1a514eed0734a4d 297 SUPERFAMILY SSF103481 47 144 4.45E-5 T 15-10-2018 AM378_19490 718ec58f0b8768afbfffadf23550c272 126 Pfam PF01850 PIN domain 7 107 1.9E-12 T 15-10-2018 IPR002716 PIN domain AM378_19490 718ec58f0b8768afbfffadf23550c272 126 SUPERFAMILY SSF88723 4 116 2.61E-24 T 15-10-2018 IPR029060 PIN-like domain superfamily AM378_19490 718ec58f0b8768afbfffadf23550c272 126 Gene3D G3DSA:3.40.50.1010 1 121 3.5E-20 T 15-10-2018 AM378_02265 54303f4ea2187e37ee18c806de4dbedd 327 Pfam PF00795 Carbon-nitrogen hydrolase 6 281 1.9E-39 T 15-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 AM378_02265 54303f4ea2187e37ee18c806de4dbedd 327 SUPERFAMILY SSF56317 5 303 5.49E-59 T 15-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily AM378_02265 54303f4ea2187e37ee18c806de4dbedd 327 Gene3D G3DSA:3.60.110.10 4 300 2.5E-57 T 15-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily AM378_18660 0e75360e8a30b7380d895231cd8ec655 257 PIRSF PIRSF000728 1 257 3.7E-70 T 15-10-2018 IPR004662 Acetylglutamate kinase family GO:0005737 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 AM378_18660 0e75360e8a30b7380d895231cd8ec655 257 Gene3D G3DSA:3.40.1160.10 1 256 2.0E-72 T 15-10-2018 IPR036393 Acetylglutamate kinase-like superfamily AM378_18660 0e75360e8a30b7380d895231cd8ec655 257 SUPERFAMILY SSF53633 2 255 1.96E-59 T 15-10-2018 IPR036393 Acetylglutamate kinase-like superfamily AM378_18660 0e75360e8a30b7380d895231cd8ec655 257 Hamap MF_00082 Acetylglutamate kinase [argB]. 1 250 43.977 T 15-10-2018 IPR037528 Acetylglutamate kinase ArgB GO:0003991|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 AM378_18660 0e75360e8a30b7380d895231cd8ec655 257 Pfam PF00696 Amino acid kinase family 4 234 1.5E-39 T 15-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 AM378_18660 0e75360e8a30b7380d895231cd8ec655 257 TIGRFAM TIGR00761 argB: acetylglutamate kinase 4 233 2.6E-74 T 15-10-2018 IPR004662 Acetylglutamate kinase family GO:0005737 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 AM378_03130 f00ff14c489083e0fc01f52dcc29306f 493 SUPERFAMILY SSF53474 233 399 1.6E-6 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold AM378_20690 982020d3c4db29634387a0d67497606e 647 Gene3D G3DSA:3.20.20.540 220 533 1.0E-153 T 15-10-2018 IPR038521 ThiC/Bza superfamily KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 AM378_20690 982020d3c4db29634387a0d67497606e 647 TIGRFAM TIGR00190 thiC: phosphomethylpyrimidine synthase 149 601 9.2E-224 T 15-10-2018 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 AM378_20690 982020d3c4db29634387a0d67497606e 647 Pfam PF13667 ThiC-associated domain 29 109 5.3E-32 T 15-10-2018 IPR025747 ThiC-associated domain KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 AM378_20690 982020d3c4db29634387a0d67497606e 647 Hamap MF_00089 Phosphomethylpyrimidine synthase [thiC]. 149 602 100.0 T 15-10-2018 IPR037509 Phosphomethylpyrimidine synthase GO:0009228|GO:0016830 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 AM378_20690 982020d3c4db29634387a0d67497606e 647 Pfam PF01964 Radical SAM ThiC family 150 598 5.4E-200 T 15-10-2018 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 AM378_09300 8b2828ae99f2cbac68c2f308df2d60cc 39 Pfam PF06528 Phage P2 GpE 1 36 1.9E-20 T 15-10-2018 IPR009493 Burkholderia phage phiE202, Gp27 AM378_14955 26733dfa926a9e54003b68adeca085fa 327 Pfam PF13407 Periplasmic binding protein domain 28 284 1.2E-46 T 15-10-2018 IPR025997 Periplasmic binding protein AM378_14955 26733dfa926a9e54003b68adeca085fa 327 SUPERFAMILY SSF53822 24 300 3.21E-58 T 15-10-2018 IPR028082 Periplasmic binding protein-like I AM378_14955 26733dfa926a9e54003b68adeca085fa 327 Gene3D G3DSA:3.40.50.2300 29 297 3.0E-82 T 15-10-2018 AM378_14955 26733dfa926a9e54003b68adeca085fa 327 Gene3D G3DSA:3.40.50.2300 126 263 3.0E-82 T 15-10-2018 AM378_09730 af279d68c0a6e2c5bf3c570b5958eb87 137 TIGRFAM TIGR01396 FlgB: flagellar basal-body rod protein FlgB 6 135 2.2E-43 T 15-10-2018 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 AM378_09730 af279d68c0a6e2c5bf3c570b5958eb87 137 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 15 35 - T 15-10-2018 IPR019776 Flagellar basal body rod protein, conserved site AM378_09730 af279d68c0a6e2c5bf3c570b5958eb87 137 PIRSF PIRSF002889 1 137 1.1E-42 T 15-10-2018 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 AM378_09730 af279d68c0a6e2c5bf3c570b5958eb87 137 Pfam PF00460 Flagella basal body rod protein 9 39 2.9E-12 T 15-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 AM378_20455 a3853ab1df1d52df327204315b45343e 87 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 3 46 2.9E-20 T 15-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 AM378_20455 a3853ab1df1d52df327204315b45343e 87 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 1 84 23.514 T 15-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 AM378_20455 a3853ab1df1d52df327204315b45343e 87 Pfam PF02416 mttA/Hcf106 family 4 50 2.2E-13 T 15-10-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 AM378_19790 4c441039355d3d31e716810d93e176be 170 Pfam PF06127 Protein of unknown function (DUF962) 1 145 1.7E-25 T 15-10-2018 IPR009305 Protein of unknown function DUF962 AM378_05700 71603e4bc83c10b62152f38cd6cf853d 498 SUPERFAMILY SSF101960 41 495 1.16E-134 T 15-10-2018 IPR037284 SUF system FeS cluster assembly, SufBD superfamily AM378_05700 71603e4bc83c10b62152f38cd6cf853d 498 Pfam PF01458 Uncharacterized protein family (UPF0051) 237 469 3.2E-67 T 15-10-2018 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 AM378_05700 71603e4bc83c10b62152f38cd6cf853d 498 TIGRFAM TIGR01980 sufB: FeS assembly protein SufB 21 489 2.6E-193 T 15-10-2018 IPR010231 SUF system FeS cluster assembly, SufB GO:0016226 AM378_04165 2286f60e20ddb16bfc97bfcbe97caf33 81 Pfam PF07119 Protein of unknown function (DUF1375) 15 75 2.4E-8 T 15-10-2018 IPR010780 Protein of unknown function DUF1375 AM378_02385 5dc793cd0f33c0e1a4b32ab0ab7b29ed 203 PRINTS PR00161 Nickel-dependent hydrogenase/B-type cytochrome signature 16 39 4.9E-5 T 15-10-2018 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0009055|GO:0016021 AM378_02385 5dc793cd0f33c0e1a4b32ab0ab7b29ed 203 PRINTS PR00161 Nickel-dependent hydrogenase/B-type cytochrome signature 168 190 4.9E-5 T 15-10-2018 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0009055|GO:0016021 AM378_02385 5dc793cd0f33c0e1a4b32ab0ab7b29ed 203 Pfam PF01292 Prokaryotic cytochrome b561 13 202 8.5E-26 T 15-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 AM378_02385 5dc793cd0f33c0e1a4b32ab0ab7b29ed 203 SUPERFAMILY SSF81342 9 203 6.12E-35 T 15-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 AM378_02385 5dc793cd0f33c0e1a4b32ab0ab7b29ed 203 Gene3D G3DSA:1.20.950.20 6 192 1.5E-20 T 15-10-2018 AM378_07420 e5f1f1bd56b78f96f2397462c37670a8 163 Pfam PF14196 L-2-amino-thiazoline-4-carboxylic acid hydrolase 14 154 7.0E-40 T 15-10-2018 IPR026002 L-2-amino-thiazoline-4-carboxylic acid hydrolase AM378_09330 ef6cb30d507b08fe8f48d984939456b5 698 Pfam PF12571 Phage tail-collar fibre protein 2 149 2.4E-50 T 15-10-2018 IPR022225 Phage tail fibre protein AM378_09330 ef6cb30d507b08fe8f48d984939456b5 698 Gene3D G3DSA:2.20.70.120 598 622 4.0E-5 T 15-10-2018 AM378_09330 ef6cb30d507b08fe8f48d984939456b5 698 Pfam PF03406 Phage tail fibre repeat 169 208 1.5E-12 T 15-10-2018 IPR005068 Bacteriophage lambda, Stf, side tail fibre-repeat-2 AM378_20375 6284eb60fe6ab2b6de479b728af3a641 281 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 93 276 1.2E-20 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AM378_20375 6284eb60fe6ab2b6de479b728af3a641 281 SUPERFAMILY SSF161098 4 277 3.74E-60 T 15-10-2018 IPR035906 MetI-like superfamily AM378_20375 6284eb60fe6ab2b6de479b728af3a641 281 Gene3D G3DSA:1.10.3720.10 2 274 4.9E-54 T 15-10-2018 IPR035906 MetI-like superfamily AM378_21965 c43d2d7ba129bb3e1e3de4ea678c12ce 306 Gene3D G3DSA:2.40.440.10 22 306 2.6E-88 T 15-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like AM378_21965 c43d2d7ba129bb3e1e3de4ea678c12ce 306 Pfam PF03734 L,D-transpeptidase catalytic domain 100 231 2.7E-16 T 15-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 AM378_21965 c43d2d7ba129bb3e1e3de4ea678c12ce 306 SUPERFAMILY SSF141523 94 233 1.57E-26 T 15-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like AM378_05020 248898244deec274c81635f466c4500f 148 ProSitePatterns PS00893 Nudix box signature. 36 57 - T 15-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 AM378_05020 248898244deec274c81635f466c4500f 148 PRINTS PR00502 NUDIX hydrolase family signature 31 45 1.6E-5 T 15-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 AM378_05020 248898244deec274c81635f466c4500f 148 PRINTS PR00502 NUDIX hydrolase family signature 45 60 1.6E-5 T 15-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 AM378_05020 248898244deec274c81635f466c4500f 148 SUPERFAMILY SSF55811 2 117 1.9E-29 T 15-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 AM378_05020 248898244deec274c81635f466c4500f 148 Gene3D G3DSA:3.90.79.10 1 148 8.5E-45 T 15-10-2018 AM378_05020 248898244deec274c81635f466c4500f 148 Pfam PF00293 NUDIX domain 4 115 2.8E-17 T 15-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 AM378_05010 f16a1ed651490c3e2825b8c4890259cb 622 Hamap MF_01522 Low affinity potassium transport system protein kup [kup]. 5 622 33.56 T 15-10-2018 IPR023051 Potassium uptake protein, low affinity, Kup AM378_05010 f16a1ed651490c3e2825b8c4890259cb 622 Pfam PF02705 K+ potassium transporter 14 544 6.6E-208 T 15-10-2018 IPR003855 Potassium transporter GO:0015079|GO:0016020|GO:0071805 AM378_05010 f16a1ed651490c3e2825b8c4890259cb 622 TIGRFAM TIGR00794 kup: potassium uptake protein 103 549 3.7E-168 T 15-10-2018 IPR003855 Potassium transporter GO:0015079|GO:0016020|GO:0071805 AM378_23975 9b1f969769950d8538072a77ff785472 248 Pfam PF09849 Uncharacterized protein conserved in bacteria (DUF2076) 1 245 3.8E-73 T 15-10-2018 IPR018648 Protein of unknown function DUF2076 AM378_13515 4fc00444ef73ba66f2a92d62caa2333f 290 ProDom PD117379 LIPOPROTEIN YFHG HELIX ALPHA REGULATOR MEMBRANE TRANSCRIPTIONAL FAMILIIY EBP TWO-COMPONENT 20 239 4.0E-64 T 15-10-2018 AM378_13515 4fc00444ef73ba66f2a92d62caa2333f 290 Pfam PF13942 YfhG lipoprotein 64 237 1.4E-79 T 15-10-2018 IPR025262 Quorum-sensing regulator protein G AM378_16965 8d56e94c0da7eb0481b4695bc2ee51f8 140 Pfam PF03788 LrgA family 30 122 8.6E-26 T 15-10-2018 IPR005538 LrgA/CidA family GO:0016021 AM378_19140 5348ca4c69e5611b7ba4c0b67ee0bbed 298 Pfam PF01553 Acyltransferase 75 209 4.2E-12 T 15-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 AM378_19140 5348ca4c69e5611b7ba4c0b67ee0bbed 298 SUPERFAMILY SSF69593 11 287 1.44E-27 T 15-10-2018 AM378_19140 5348ca4c69e5611b7ba4c0b67ee0bbed 298 SMART SM00563 88 230 2.0E-15 T 15-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 AM378_06540 0a7963f00988f19be1854546fdd55999 143 Pfam PF08786 DcrB 11 139 2.8E-32 T 15-10-2018 IPR014894 Protein DcrB AM378_06540 0a7963f00988f19be1854546fdd55999 143 Gene3D G3DSA:3.40.1000.10 5 143 7.4E-31 T 15-10-2018 IPR016123 Mog1/PsbP, alpha/beta/alpha sandwich AM378_06540 0a7963f00988f19be1854546fdd55999 143 SUPERFAMILY SSF55724 5 141 6.8E-33 T 15-10-2018 IPR016123 Mog1/PsbP, alpha/beta/alpha sandwich AM378_21325 f91376429cc8863451093c86dcebc1ce 111 Pfam PF03840 Preprotein translocase SecG subunit 5 72 5.6E-22 T 15-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 AM378_21325 f91376429cc8863451093c86dcebc1ce 111 TIGRFAM TIGR00810 secG: preprotein translocase, SecG subunit 3 73 7.8E-27 T 15-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 AM378_21325 f91376429cc8863451093c86dcebc1ce 111 PRINTS PR01651 Protein-export SecG membrane protein signature 38 54 2.2E-42 T 15-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 AM378_21325 f91376429cc8863451093c86dcebc1ce 111 PRINTS PR01651 Protein-export SecG membrane protein signature 54 76 2.2E-42 T 15-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 AM378_21325 f91376429cc8863451093c86dcebc1ce 111 PRINTS PR01651 Protein-export SecG membrane protein signature 3 23 2.2E-42 T 15-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 AM378_21325 f91376429cc8863451093c86dcebc1ce 111 PRINTS PR01651 Protein-export SecG membrane protein signature 23 37 2.2E-42 T 15-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 AM378_14830 cf3a786ef624ff75d624167dbaeab9c3 665 ProSitePatterns PS01303 BCCT family of transporters signature. 321 330 - T 15-10-2018 IPR018093 BCCT transporter, conserved site AM378_14830 cf3a786ef624ff75d624167dbaeab9c3 665 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 57 504 4.1E-162 T 15-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 AM378_14830 cf3a786ef624ff75d624167dbaeab9c3 665 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 19 504 2.4E-195 T 15-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 AM378_18970 80ecde893e12c05cd23b1f4ef2521de7 78 Hamap MF_00373 50S ribosomal protein L28 [rpmB]. 1 67 21.265 T 15-10-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM378_18970 80ecde893e12c05cd23b1f4ef2521de7 78 SUPERFAMILY SSF143800 2 77 1.31E-29 T 15-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM378_18970 80ecde893e12c05cd23b1f4ef2521de7 78 TIGRFAM TIGR00009 L28: ribosomal protein bL28 1 57 3.7E-28 T 15-10-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM378_18970 80ecde893e12c05cd23b1f4ef2521de7 78 Pfam PF00830 Ribosomal L28 family 3 62 4.3E-26 T 15-10-2018 IPR026569 Ribosomal protein L28/L24 GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM378_18970 80ecde893e12c05cd23b1f4ef2521de7 78 Gene3D G3DSA:2.30.170.40 2 78 1.0E-32 T 15-10-2018 IPR037147 Ribosomal protein L28/L24 superfamily GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM378_06720 99b784e1327a15e08d07bc1482d4734d 164 TIGRFAM TIGR00645 HI0507: TIGR00645 family protein 2 164 1.1E-78 T 15-10-2018 IPR020761 Uncharacterised protein family UPF0114, bacteria AM378_06720 99b784e1327a15e08d07bc1482d4734d 164 Hamap MF_00143 UPF0114 protein YqhA [yqhA]. 1 164 90.678 T 15-10-2018 IPR020761 Uncharacterised protein family UPF0114, bacteria AM378_06720 99b784e1327a15e08d07bc1482d4734d 164 Pfam PF03350 Uncharacterized protein family, UPF0114 9 125 4.9E-35 T 15-10-2018 IPR005134 Uncharacterised protein family UPF0114 AM378_05920 e223902fb9ec5cc62458d434273e4ba9 286 Pfam PF08543 Phosphomethylpyrimidine kinase 73 263 9.4E-14 T 15-10-2018 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-6798695|Reactome: R-HSA-964975 AM378_05920 e223902fb9ec5cc62458d434273e4ba9 286 Hamap MF_01639 Pyridoxal kinase PdxY [pdxY]. 1 286 53.905 T 15-10-2018 IPR023685 Pyridoxal kinase PdxY GO:0008478|GO:0009443 KEGG: 00750+2.7.1.35|MetaCyc: PWY-7204|MetaCyc: PWY-7282 AM378_05920 e223902fb9ec5cc62458d434273e4ba9 286 TIGRFAM TIGR00687 pyridox_kin: pyridoxal kinase 1 285 5.7E-132 T 15-10-2018 IPR004625 Pyridoxine kinase GO:0008478|GO:0009443 KEGG: 00750+2.7.1.35|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-6798695|Reactome: R-HSA-964975 AM378_05920 e223902fb9ec5cc62458d434273e4ba9 286 SUPERFAMILY SSF53613 1 279 2.46E-75 T 15-10-2018 IPR029056 Ribokinase-like AM378_05920 e223902fb9ec5cc62458d434273e4ba9 286 Gene3D G3DSA:3.40.1190.20 1 286 1.2E-90 T 15-10-2018 IPR029056 Ribokinase-like AM378_06940 210c8cd7881955c86dc73ce04faea863 295 Gene3D G3DSA:3.90.25.10 141 263 1.3E-63 T 15-10-2018 AM378_06940 210c8cd7881955c86dc73ce04faea863 295 Gene3D G3DSA:3.40.50.720 9 199 1.3E-63 T 15-10-2018 AM378_06940 210c8cd7881955c86dc73ce04faea863 295 Pfam PF05368 NmrA-like family 8 225 7.1E-26 T 15-10-2018 IPR008030 NmrA-like domain Reactome: R-HSA-70635 AM378_06940 210c8cd7881955c86dc73ce04faea863 295 SUPERFAMILY SSF51735 5 262 2.29E-54 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily AM378_02720 a59e791d56b2b0e5951bacecff48923e 378 Gene3D G3DSA:1.20.5.70 345 378 7.8E-15 T 15-10-2018 AM378_02720 a59e791d56b2b0e5951bacecff48923e 378 Pfam PF10531 SLBB domain 256 302 2.5E-4 T 15-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM378_02720 a59e791d56b2b0e5951bacecff48923e 378 Pfam PF10531 SLBB domain 173 219 1.1E-8 T 15-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM378_02720 a59e791d56b2b0e5951bacecff48923e 378 Pfam PF02563 Polysaccharide biosynthesis/export protein 82 165 4.1E-28 T 15-10-2018 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 AM378_02720 a59e791d56b2b0e5951bacecff48923e 378 Gene3D G3DSA:3.30.1950.10 88 169 2.9E-124 T 15-10-2018 AM378_02720 a59e791d56b2b0e5951bacecff48923e 378 Gene3D G3DSA:3.10.560.10 66 254 2.9E-124 T 15-10-2018 AM378_02720 a59e791d56b2b0e5951bacecff48923e 378 Gene3D G3DSA:3.10.560.10 53 342 2.9E-124 T 15-10-2018 AM378_12740 39d56e387cb71fb8e0ca1954a9645203 197 SUPERFAMILY SSF81296 28 196 6.44E-66 T 15-10-2018 IPR014756 Immunoglobulin E-set AM378_12740 39d56e387cb71fb8e0ca1954a9645203 197 Gene3D G3DSA:2.70.50.50 28 197 2.7E-80 T 15-10-2018 AM378_12740 39d56e387cb71fb8e0ca1954a9645203 197 Pfam PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading 28 193 1.2E-38 T 15-10-2018 IPR004302 Cellulose/chitin-binding protein, N-terminal AM378_20890 b98ea6d20df171b7f095774c0481bb21 433 PIRSF PIRSF004539 1 433 6.9E-177 T 15-10-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 AM378_20890 b98ea6d20df171b7f095774c0481bb21 433 Pfam PF03605 Anaerobic c4-dicarboxylate membrane transporter 5 365 9.1E-144 T 15-10-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 AM378_20890 b98ea6d20df171b7f095774c0481bb21 433 TIGRFAM TIGR00770 Dcu: transporter, anaerobic C4-dicarboxylate uptake (Dcu) family 5 433 1.9E-198 T 15-10-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 AM378_14740 9363278dddac08bf49a04b6dc8cd3c71 67 Pfam PF15959 Domain of unknown function (DUF4762) 1 60 4.8E-18 T 15-10-2018 IPR031882 Protein of unknown function DUF4762 AM378_16800 f06ab7319a2c32d91c6f768238b5c022 67 Pfam PF07869 Protein of unknown function (DUF1656) 7 61 2.8E-20 T 15-10-2018 IPR012451 Protein of unknown function DUF1656 AM378_16800 f06ab7319a2c32d91c6f768238b5c022 67 Hamap MF_01546 Protein AaeX [aaeX]. 1 67 24.114 T 15-10-2018 IPR012451 Protein of unknown function DUF1656 AM378_12335 fc53145751a8d64d4c2cf94a952027d5 179 SUPERFAMILY SSF55729 2 171 3.54E-46 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase AM378_12335 fc53145751a8d64d4c2cf94a952027d5 179 Pfam PF13302 Acetyltransferase (GNAT) domain 7 147 5.5E-26 T 15-10-2018 IPR000182 GNAT domain AM378_12335 fc53145751a8d64d4c2cf94a952027d5 179 Gene3D G3DSA:3.40.630.30 1 179 4.2E-44 T 15-10-2018 AM378_06870 29ecc6d3ac74b729af80b467f6fc20f2 298 SUPERFAMILY SSF46785 3 82 1.21E-16 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM378_06870 29ecc6d3ac74b729af80b467f6fc20f2 298 Gene3D G3DSA:1.10.10.10 1 84 7.6E-24 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_06870 29ecc6d3ac74b729af80b467f6fc20f2 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 65 5.1E-15 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM378_06870 29ecc6d3ac74b729af80b467f6fc20f2 298 Gene3D G3DSA:3.40.190.10 91 292 1.2E-59 T 15-10-2018 AM378_06870 29ecc6d3ac74b729af80b467f6fc20f2 298 SUPERFAMILY SSF53850 90 296 1.3E-38 T 15-10-2018 AM378_06870 29ecc6d3ac74b729af80b467f6fc20f2 298 Gene3D G3DSA:3.40.190.10 169 268 1.2E-59 T 15-10-2018 AM378_06870 29ecc6d3ac74b729af80b467f6fc20f2 298 Pfam PF03466 LysR substrate binding domain 93 296 1.7E-24 T 15-10-2018 IPR005119 LysR, substrate-binding AM378_04425 786ec9258a470fb56596b4ecaaa2095d 129 Pfam PF07233 Protein of unknown function (DUF1425) 38 128 4.5E-26 T 15-10-2018 IPR010824 Protein of unknown function DUF1425 AM378_04425 786ec9258a470fb56596b4ecaaa2095d 129 Gene3D G3DSA:2.60.40.3230 24 128 2.4E-19 T 15-10-2018 IPR038483 YcfL-like superfamily AM378_22090 f4d663434fd8bc252b966e9862df68db 196 Pfam PF11354 Protein of unknown function (DUF3156) 30 190 1.3E-62 T 15-10-2018 IPR021500 Protein of unknown function DUF3156 AM378_12655 11f4082041839631c03bb98549e03d33 132 Gene3D G3DSA:2.40.50.200 20 132 1.4E-42 T 15-10-2018 IPR036700 Bacterial OB-fold superfamily AM378_12655 11f4082041839631c03bb98549e03d33 132 Pfam PF04076 Bacterial OB fold (BOF) protein 34 130 1.9E-36 T 15-10-2018 IPR005220 Bacterial OB-fold AM378_12655 11f4082041839631c03bb98549e03d33 132 SUPERFAMILY SSF101756 33 131 2.88E-35 T 15-10-2018 IPR036700 Bacterial OB-fold superfamily AM378_12655 11f4082041839631c03bb98549e03d33 132 TIGRFAM TIGR00156 TIGR00156: TIGR00156 family protein 1 130 1.2E-44 T 15-10-2018 IPR016052 Bacteriophage 933W, L0136 AM378_15005 cf4903212637143765c769e952577dd0 176 Gene3D G3DSA:3.40.630.30 6 164 2.0E-13 T 15-10-2018 AM378_15005 cf4903212637143765c769e952577dd0 176 SUPERFAMILY SSF55729 42 158 5.32E-17 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase AM378_15005 cf4903212637143765c769e952577dd0 176 Pfam PF00583 Acetyltransferase (GNAT) family 52 148 5.7E-10 T 15-10-2018 IPR000182 GNAT domain AM378_12395 446661e26cbb4e2e3b466ac29e2f1e64 329 Pfam PF00248 Aldo/keto reductase family 28 327 1.8E-68 T 15-10-2018 IPR023210 NADP-dependent oxidoreductase domain AM378_12395 446661e26cbb4e2e3b466ac29e2f1e64 329 SUPERFAMILY SSF51430 13 327 5.37E-89 T 15-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily AM378_12395 446661e26cbb4e2e3b466ac29e2f1e64 329 Gene3D G3DSA:3.20.20.100 15 329 2.3E-122 T 15-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily AM378_06890 333b5c820daab03ad8a74beb27542c83 140 SMART SM00422 1 70 6.2E-29 T 15-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM378_06890 333b5c820daab03ad8a74beb27542c83 140 Pfam PF13411 MerR HTH family regulatory protein 1 68 2.4E-18 T 15-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM378_06890 333b5c820daab03ad8a74beb27542c83 140 Gene3D G3DSA:1.10.1660.10 2 138 8.1E-29 T 15-10-2018 AM378_06890 333b5c820daab03ad8a74beb27542c83 140 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 2 13 2.0E-11 T 15-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM378_06890 333b5c820daab03ad8a74beb27542c83 140 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 26 2.0E-11 T 15-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM378_06890 333b5c820daab03ad8a74beb27542c83 140 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 37 57 2.0E-11 T 15-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM378_06890 333b5c820daab03ad8a74beb27542c83 140 SUPERFAMILY SSF46955 1 104 1.47E-26 T 15-10-2018 IPR009061 Putative DNA-binding domain superfamily AM378_06890 333b5c820daab03ad8a74beb27542c83 140 ProSitePatterns PS00552 MerR-type HTH domain signature. 4 26 - T 15-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM378_05770 8d8125764c8a1093e56539c3f987b1cd 97 Gene3D G3DSA:3.30.10.10 34 96 8.8E-13 T 15-10-2018 AM378_05770 8d8125764c8a1093e56539c3f987b1cd 97 Pfam PF11720 Peptidase inhibitor I78 family 38 97 1.7E-9 T 15-10-2018 IPR021719 Proteinase inhibitor I78 AM378_19515 04a3e7ddb17319479d2a4227fd47bff1 422 Pfam PF07690 Major Facilitator Superfamily 18 375 2.1E-56 T 15-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM378_19515 04a3e7ddb17319479d2a4227fd47bff1 422 SUPERFAMILY SSF103473 7 413 2.35E-86 T 15-10-2018 IPR036259 MFS transporter superfamily AM378_19515 04a3e7ddb17319479d2a4227fd47bff1 422 Gene3D G3DSA:1.20.1250.20 5 206 7.9E-43 T 15-10-2018 AM378_19515 04a3e7ddb17319479d2a4227fd47bff1 422 Gene3D G3DSA:1.20.1250.20 223 418 5.8E-36 T 15-10-2018 AM378_22700 e26a1384a7986b5876efba8bba720a02 32 Pfam PF08049 IlvB leader peptide 2 32 8.7E-12 T 15-10-2018 IPR012566 IlvB leader peptide AM378_23590 036b5166cf20887ea0b496c3519f7344 75 Pfam PF04400 (Na+)-NQR maturation NqrM 23 64 4.3E-21 T 15-10-2018 IPR007495 (Na+)-NQR maturation factor NqrM AM378_20795 53bb301ddd39c98c5fc247a0475f12c1 536 Gene3D G3DSA:3.30.559.10 2 185 3.9E-42 T 15-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 AM378_20795 53bb301ddd39c98c5fc247a0475f12c1 536 SUPERFAMILY SSF52777 4 177 6.78E-23 T 15-10-2018 AM378_20795 53bb301ddd39c98c5fc247a0475f12c1 536 Pfam PF00668 Condensation domain 3 428 1.1E-34 T 15-10-2018 IPR001242 Condensation domain AM378_20795 53bb301ddd39c98c5fc247a0475f12c1 536 SUPERFAMILY SSF52777 183 435 8.34E-37 T 15-10-2018 AM378_20795 53bb301ddd39c98c5fc247a0475f12c1 536 Gene3D G3DSA:3.30.559.30 186 432 4.5E-57 T 15-10-2018 AM378_09615 f5f76567c1fe7917b13baa7d47587c1c 234 Pfam PF02108 Flagellar assembly protein FliH 101 225 5.8E-39 T 15-10-2018 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE AM378_09615 f5f76567c1fe7917b13baa7d47587c1c 234 PRINTS PR01003 Flagellar assembly protein FliH signature 121 138 1.0E-82 T 15-10-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 AM378_09615 f5f76567c1fe7917b13baa7d47587c1c 234 PRINTS PR01003 Flagellar assembly protein FliH signature 190 206 1.0E-82 T 15-10-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 AM378_09615 f5f76567c1fe7917b13baa7d47587c1c 234 PRINTS PR01003 Flagellar assembly protein FliH signature 8 27 1.0E-82 T 15-10-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 AM378_09615 f5f76567c1fe7917b13baa7d47587c1c 234 PRINTS PR01003 Flagellar assembly protein FliH signature 162 189 1.0E-82 T 15-10-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 AM378_09615 f5f76567c1fe7917b13baa7d47587c1c 234 PRINTS PR01003 Flagellar assembly protein FliH signature 139 161 1.0E-82 T 15-10-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 AM378_09615 f5f76567c1fe7917b13baa7d47587c1c 234 PRINTS PR01003 Flagellar assembly protein FliH signature 101 120 1.0E-82 T 15-10-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 AM378_09615 f5f76567c1fe7917b13baa7d47587c1c 234 PRINTS PR01003 Flagellar assembly protein FliH signature 59 81 1.0E-82 T 15-10-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 AM378_09615 f5f76567c1fe7917b13baa7d47587c1c 234 PRINTS PR01003 Flagellar assembly protein FliH signature 82 100 1.0E-82 T 15-10-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 AM378_09615 f5f76567c1fe7917b13baa7d47587c1c 234 PRINTS PR01003 Flagellar assembly protein FliH signature 207 232 1.0E-82 T 15-10-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 AM378_22210 c86221f6dfd2f6f59d0f1ddf6c02d740 119 Gene3D G3DSA:3.30.70.100 9 103 1.1E-12 T 15-10-2018 AM378_22210 c86221f6dfd2f6f59d0f1ddf6c02d740 119 Pfam PF05336 L-rhamnose mutarotase 10 116 5.7E-29 T 15-10-2018 IPR008000 Rhamnose/fucose mutarotase GO:0005737|GO:0016857 AM378_22210 c86221f6dfd2f6f59d0f1ddf6c02d740 119 SUPERFAMILY SSF54909 10 116 4.02E-27 T 15-10-2018 IPR011008 Dimeric alpha-beta barrel AM378_21415 57e531d90f641d283929bd8379e8e646 384 Pfam PF12698 ABC-2 family transporter protein 33 368 8.2E-24 T 15-10-2018 AM378_21415 57e531d90f641d283929bd8379e8e646 384 Gene3D G3DSA:3.40.1710.10 50 177 6.7E-7 T 15-10-2018 AM378_05925 acc425c7a5701977f372fe28794db44d 201 SUPERFAMILY SSF47616 81 199 5.08E-30 T 15-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily AM378_05925 acc425c7a5701977f372fe28794db44d 201 Pfam PF02798 Glutathione S-transferase, N-terminal domain 8 74 1.2E-11 T 15-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AM378_05925 acc425c7a5701977f372fe28794db44d 201 Pfam PF00043 Glutathione S-transferase, C-terminal domain 102 189 8.0E-19 T 15-10-2018 IPR004046 Glutathione S-transferase, C-terminal AM378_05925 acc425c7a5701977f372fe28794db44d 201 Gene3D G3DSA:1.20.1050.10 82 188 2.5E-75 T 15-10-2018 AM378_05925 acc425c7a5701977f372fe28794db44d 201 SUPERFAMILY SSF52833 1 85 3.66E-19 T 15-10-2018 IPR036249 Thioredoxin-like superfamily AM378_05925 acc425c7a5701977f372fe28794db44d 201 Gene3D G3DSA:3.40.30.10 3 192 2.5E-75 T 15-10-2018 AM378_08865 d7d70043fd197f48e6392085db08b7c5 528 Gene3D G3DSA:3.20.20.450 264 519 1.4E-76 T 15-10-2018 IPR035919 EAL domain superfamily AM378_08865 d7d70043fd197f48e6392085db08b7c5 528 SMART SM00052 265 506 3.4E-94 T 15-10-2018 IPR001633 EAL domain AM378_08865 d7d70043fd197f48e6392085db08b7c5 528 Pfam PF12792 CSS motif domain associated with EAL 46 232 1.3E-27 T 15-10-2018 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain AM378_08865 d7d70043fd197f48e6392085db08b7c5 528 Pfam PF00563 EAL domain 275 501 8.2E-61 T 15-10-2018 IPR001633 EAL domain AM378_08865 d7d70043fd197f48e6392085db08b7c5 528 SUPERFAMILY SSF141868 273 514 8.89E-74 T 15-10-2018 IPR035919 EAL domain superfamily AM378_04065 baf33ed84e2133e53661293d0ed22bba 446 Pfam PF03605 Anaerobic c4-dicarboxylate membrane transporter 6 376 3.5E-146 T 15-10-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 AM378_04065 baf33ed84e2133e53661293d0ed22bba 446 TIGRFAM TIGR00770 Dcu: transporter, anaerobic C4-dicarboxylate uptake (Dcu) family 6 441 2.1E-190 T 15-10-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 AM378_04065 baf33ed84e2133e53661293d0ed22bba 446 PIRSF PIRSF004539 1 444 1.1E-191 T 15-10-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 AM378_20280 f0fe2aeb6cad0f5763f4b97d6e70fedb 208 Pfam PF07947 YhhN family 26 206 3.2E-42 T 15-10-2018 IPR012506 YhhN-like GO:0016021 AM378_22620 a0faac6f32bba8189c24c8a22a44d434 156 Pfam PF12821 Threonine/Serine exporter, ThrE 13 146 6.2E-35 T 15-10-2018 IPR024528 Threonine/Serine exporter, ThrE AM378_22620 a0faac6f32bba8189c24c8a22a44d434 156 Hamap MF_01191 UPF0442 protein YjjB [yjjB]. 1 156 35.906 T 15-10-2018 IPR020914 Uncharacterised protein family UPF0442 AM378_04025 3f6f5f9d17c6d3e6fb6a10142190eb93 113 Pfam PF06942 GlpM protein 5 110 9.8E-47 T 15-10-2018 IPR009707 Membrane protein GlpM/YdgC AM378_04025 3f6f5f9d17c6d3e6fb6a10142190eb93 113 ProDom PD028709 MEMBRANE INNER YDGC GLPM ALGINATE BIOSYNTHESIS TRANSMEMBRANE REQUIRED FOR UNCHARACTERIZED 23 111 2.0E-31 T 15-10-2018 IPR009707 Membrane protein GlpM/YdgC AM378_04650 4c428e6e7b6e17c8801104b36ad4b768 396 Gene3D G3DSA:3.50.50.60 3 385 6.8E-78 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AM378_04650 4c428e6e7b6e17c8801104b36ad4b768 396 SUPERFAMILY SSF51905 1 282 8.63E-47 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AM378_04650 4c428e6e7b6e17c8801104b36ad4b768 396 Gene3D G3DSA:3.30.9.10 86 352 6.8E-78 T 15-10-2018 AM378_04650 4c428e6e7b6e17c8801104b36ad4b768 396 Pfam PF01266 FAD dependent oxidoreductase 3 390 1.0E-58 T 15-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 AM378_23950 d02ac542bf8893b6fa49e0d2eff76b93 391 Gene3D G3DSA:3.90.1570.30 5 137 2.9E-5 T 15-10-2018 AM378_23950 d02ac542bf8893b6fa49e0d2eff76b93 391 Pfam PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) 25 125 3.5E-9 T 15-10-2018 IPR029464 Type I restriction enzyme R protein, N-terminal domain AM378_18200 988ee6caefb28ac1bb9078c6891cd388 203 Gene3D G3DSA:2.60.40.1090 49 202 8.6E-27 T 15-10-2018 IPR036937 Fimbrial-type adhesion domain superfamily GO:0007155|GO:0009289 AM378_18200 988ee6caefb28ac1bb9078c6891cd388 203 SUPERFAMILY SSF49401 37 202 1.04E-26 T 15-10-2018 IPR008966 Adhesion domain superfamily AM378_18200 988ee6caefb28ac1bb9078c6891cd388 203 Pfam PF00419 Fimbrial protein 40 183 5.4E-7 T 15-10-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM378_16890 605b900a4ef145e7f35ef35a0e613e5d 199 Pfam PF01794 Ferric reductase like transmembrane component 48 161 1.5E-14 T 15-10-2018 IPR013130 Ferric reductase transmembrane component-like domain AM378_16890 605b900a4ef145e7f35ef35a0e613e5d 199 Hamap MF_01207 Protein-methionine-sulfoxide reductase heme-binding subunit MsrQ [msrQ]. 3 197 21.009 T 15-10-2018 IPR022837 Protein-methionine-sulfoxide reductase subunit MsrQ GO:0005887|GO:0030091 AM378_06725 60376d07a02f05bbb5fd39d252f49ef2 220 Pfam PF02517 CAAX protease self-immunity 120 210 3.0E-12 T 15-10-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 AM378_05230 d459c1db4a6b8a0913226ea6c3a3a94d 187 SUPERFAMILY SSF51182 1 185 7.65E-52 T 15-10-2018 IPR011051 RmlC-like cupin domain superfamily AM378_05230 d459c1db4a6b8a0913226ea6c3a3a94d 187 Pfam PF05962 HutD 12 178 8.2E-51 T 15-10-2018 IPR010282 Uncharacterised protein family HutD/Ves AM378_05230 d459c1db4a6b8a0913226ea6c3a3a94d 187 Gene3D G3DSA:2.60.120.10 9 116 4.2E-35 T 15-10-2018 IPR014710 RmlC-like jelly roll fold AM378_06865 210bf4cb618904ba33d4105bb7fc9ff0 156 PIRSF PIRSF012335 1 156 1.1E-62 T 15-10-2018 IPR016596 Protein of unknown function UCP012335 AM378_06865 210bf4cb618904ba33d4105bb7fc9ff0 156 Pfam PF11008 Protein of unknown function (DUF2846) 17 127 1.1E-32 T 15-10-2018 IPR022548 Domain of unknown function DUF2846 AM378_09975 34495c8820ab2f9bbe906c06b23cf6ef 120 Pfam PF16695 Type VI secretion system (T6SS), amidase immunity protein 32 107 2.2E-12 T 15-10-2018 IPR032032 Type VI secretion system (T6SS), amidase immunity protein AM378_09975 34495c8820ab2f9bbe906c06b23cf6ef 120 Gene3D G3DSA:1.20.120.1620 18 119 1.5E-41 T 15-10-2018 IPR038314 T6SS superfamily AM378_06645 2af1e07ecd7aa191130f7b594e3fee2b 131 Pfam PF04248 Domain of unknown function (DUF427) 31 122 2.7E-31 T 15-10-2018 IPR007361 Domain of unknown function DUF427 AM378_06645 2af1e07ecd7aa191130f7b594e3fee2b 131 Gene3D G3DSA:2.170.150.40 16 127 1.4E-37 T 15-10-2018 AM378_19495 d6680de406b954881199fb8d8102f0bf 69 Gene3D G3DSA:1.10.1220.10 1 42 7.7E-18 T 15-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 AM378_19495 d6680de406b954881199fb8d8102f0bf 69 Pfam PF01402 Ribbon-helix-helix protein, copG family 3 36 6.5E-7 T 15-10-2018 IPR002145 Ribbon-helix-helix protein, CopG GO:0006355 AM378_02245 669f4ae21d3afb64a4f29e936d38bacd 183 SUPERFAMILY SSF52540 2 104 1.33E-16 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_02245 669f4ae21d3afb64a4f29e936d38bacd 183 Gene3D G3DSA:3.40.50.300 1 149 8.5E-15 T 15-10-2018 AM378_02245 669f4ae21d3afb64a4f29e936d38bacd 183 Pfam PF02224 Cytidylate kinase 4 35 6.7E-5 T 15-10-2018 IPR011994 Cytidylate kinase domain GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 AM378_21815 5ea5286330be7b9537026d4239d75fb2 332 Gene3D G3DSA:3.20.20.140 1 330 5.1E-97 T 15-10-2018 AM378_21815 5ea5286330be7b9537026d4239d75fb2 332 SUPERFAMILY SSF51556 31 330 1.02E-77 T 15-10-2018 IPR032466 Metal-dependent hydrolase AM378_21815 5ea5286330be7b9537026d4239d75fb2 332 Pfam PF04909 Amidohydrolase 36 329 6.7E-38 T 15-10-2018 IPR006680 Amidohydrolase-related GO:0016787 AM378_15305 1a01c85b9c69eae7e2fa287c1eca8034 413 SUPERFAMILY SSF103473 3 400 8.89E-58 T 15-10-2018 IPR036259 MFS transporter superfamily AM378_15305 1a01c85b9c69eae7e2fa287c1eca8034 413 Pfam PF07690 Major Facilitator Superfamily 13 366 1.2E-43 T 15-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM378_15305 1a01c85b9c69eae7e2fa287c1eca8034 413 Gene3D G3DSA:1.20.1250.20 2 195 5.0E-29 T 15-10-2018 AM378_15305 1a01c85b9c69eae7e2fa287c1eca8034 413 Gene3D G3DSA:1.20.1250.20 213 403 3.7E-25 T 15-10-2018 AM378_16230 a479f939ddfc419e30e74e85d7bf143f 344 TIGRFAM TIGR01540 portal_PBSX: phage portal protein, PBSX family 54 334 3.3E-84 T 15-10-2018 IPR006430 Phage portal protein PBSX family AM378_16230 a479f939ddfc419e30e74e85d7bf143f 344 PIRSF PIRSF018494 1 344 2.8E-160 T 15-10-2018 IPR030935 Phage portal protein PBSX family, Proteobacteria AM378_16230 a479f939ddfc419e30e74e85d7bf143f 344 Pfam PF04860 Phage portal protein 103 324 2.1E-15 T 15-10-2018 IPR006944 Bacteriophage/Gene transfer agent portal protein AM378_09635 3fc8d262e2ed5da5d4fe6945074cf704 161 Pfam PF03748 Flagellar basal body-associated protein FliL 59 159 6.7E-22 T 15-10-2018 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 AM378_06035 c3c6f1f4f6b73436b333933938d1a7be 146 Pfam PF10754 Protein of unknown function (DUF2569) 6 144 6.9E-44 T 15-10-2018 IPR019690 Protein of unknown function DUF2569 AM378_01525 15b035285e43007deaaf2f220bc30557 314 SUPERFAMILY SSF53474 37 297 3.02E-28 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold AM378_01525 15b035285e43007deaaf2f220bc30557 314 Gene3D G3DSA:3.40.50.1820 35 299 4.8E-32 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold AM378_01525 15b035285e43007deaaf2f220bc30557 314 Pfam PF12146 Serine aminopeptidase, S33 48 282 2.6E-25 T 15-10-2018 IPR022742 Serine aminopeptidase, S33 AM378_16285 db862e2e5e9eb95586c6f84679c90b96 80 Pfam PF10809 Protein of unknown function (DUF2732) 20 79 2.3E-21 T 15-10-2018 IPR020126 Protein of unknown function DUF2732 AM378_16285 db862e2e5e9eb95586c6f84679c90b96 80 ProDom PD057914 C0939 STY4639 GPA GP33 PRECURSOR FELS-2 5'REGION STY3665 SIGNAL PHAGE-RELATED 13 80 2.0E-6 T 15-10-2018 IPR020126 Protein of unknown function DUF2732 AM378_08810 004f053139c5831926a087f68329cd61 119 Pfam PF13995 YebF-like protein 28 116 2.3E-37 T 15-10-2018 IPR025603 YebF/Colicin-M immunity protein AM378_08810 004f053139c5831926a087f68329cd61 119 ProDom PD077599 YEBF LIPOPROTEIN EXPORTED PERIPLASMIC PRECURSOR SIGNAL SIMILAR PALMITATE MEMBRANE ESCHERICHIA 26 115 1.0E-24 T 15-10-2018 IPR025603 YebF/Colicin-M immunity protein AM378_08810 004f053139c5831926a087f68329cd61 119 Gene3D G3DSA:3.10.450.300 22 119 2.4E-36 T 15-10-2018 IPR038703 YebF/Cmi superfamily AM378_21900 c836842e222777fff175947f0f9ef350 116 Pfam PF05973 Phage derived protein Gp49-like (DUF891) 13 106 1.3E-24 T 15-10-2018 IPR009241 Toxin HigB-like AM378_05305 22d02ad29edfb07a03332af7638e373a 184 SMART SM00972 121 181 2.6E-18 T 15-10-2018 IPR007893 Spore coat protein U AM378_05305 22d02ad29edfb07a03332af7638e373a 184 Pfam PF05229 Spore Coat Protein U domain 32 181 3.1E-32 T 15-10-2018 IPR007893 Spore coat protein U AM378_17630 476100452543c360d175e6dcea7a5a95 602 TIGRFAM TIGR00932 2a37: transporter, monovalent cation:proton antiporter-2 (CPA2) family 14 283 3.1E-88 T 15-10-2018 IPR004771 K+/H+ exchanger GO:0006812|GO:0008324|GO:0016021 AM378_17630 476100452543c360d175e6dcea7a5a95 602 Pfam PF00999 Sodium/hydrogen exchanger family 10 373 3.6E-68 T 15-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 AM378_17630 476100452543c360d175e6dcea7a5a95 602 SUPERFAMILY SSF51735 402 530 1.33E-29 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily AM378_17630 476100452543c360d175e6dcea7a5a95 602 Hamap MF_01412 Glutathione-regulated potassium-efflux system protein KefB [kefB]. 2 599 48.845 T 15-10-2018 IPR020884 Glutathione-regulated potassium-efflux system protein KefB GO:0005886|GO:0006813|GO:0015503 AM378_17630 476100452543c360d175e6dcea7a5a95 602 Gene3D G3DSA:1.20.1530.20 3 387 6.1E-81 T 15-10-2018 IPR038770 Sodium/solute symporter superfamily AM378_17630 476100452543c360d175e6dcea7a5a95 602 Pfam PF02254 TrkA-N domain 403 514 1.6E-24 T 15-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 AM378_17630 476100452543c360d175e6dcea7a5a95 602 Gene3D G3DSA:3.40.50.720 400 561 3.7E-36 T 15-10-2018 AM378_06990 c92be00e3395a864bf516583a0cc8c15 313 SUPERFAMILY SSF51658 5 298 2.63E-43 T 15-10-2018 IPR036237 Xylose isomerase-like superfamily AM378_06990 c92be00e3395a864bf516583a0cc8c15 313 Gene3D G3DSA:3.20.20.150 1 311 1.9E-62 T 15-10-2018 AM378_06990 c92be00e3395a864bf516583a0cc8c15 313 Pfam PF07582 AP endonuclease family 2 C terminus 269 311 2.4E-9 T 15-10-2018 IPR011418 AP endonuclease, family 2, C-terminal AM378_06990 c92be00e3395a864bf516583a0cc8c15 313 Pfam PF01261 Xylose isomerase-like TIM barrel 19 263 1.7E-31 T 15-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain AM378_05625 219459cf1662e55c354414aee1637950 276 Gene3D G3DSA:3.40.50.1980 145 276 1.2E-49 T 15-10-2018 AM378_05625 219459cf1662e55c354414aee1637950 276 Pfam PF01497 Periplasmic binding protein 27 251 1.9E-27 T 15-10-2018 IPR002491 ABC transporter periplasmic binding domain AM378_05625 219459cf1662e55c354414aee1637950 276 Gene3D G3DSA:3.40.50.1980 23 144 3.1E-42 T 15-10-2018 AM378_05625 219459cf1662e55c354414aee1637950 276 SUPERFAMILY SSF53807 24 271 2.86E-50 T 15-10-2018 AM378_12170 441db85cf43c97817cedf1e2d098f768 252 PRINTS PR01805 VacJ lipoprotein signature 139 156 1.0E-32 T 15-10-2018 IPR007428 MlaA lipoprotein GO:0016020 AM378_12170 441db85cf43c97817cedf1e2d098f768 252 PRINTS PR01805 VacJ lipoprotein signature 31 44 1.0E-32 T 15-10-2018 IPR007428 MlaA lipoprotein GO:0016020 AM378_12170 441db85cf43c97817cedf1e2d098f768 252 PRINTS PR01805 VacJ lipoprotein signature 100 117 1.0E-32 T 15-10-2018 IPR007428 MlaA lipoprotein GO:0016020 AM378_12170 441db85cf43c97817cedf1e2d098f768 252 PRINTS PR01805 VacJ lipoprotein signature 49 65 1.0E-32 T 15-10-2018 IPR007428 MlaA lipoprotein GO:0016020 AM378_12170 441db85cf43c97817cedf1e2d098f768 252 Pfam PF04333 MlaA lipoprotein 30 223 3.0E-65 T 15-10-2018 IPR007428 MlaA lipoprotein GO:0016020 AM378_19815 b2b10d3d9d62b05c1e77bd7d6c7a3aa7 464 Gene3D G3DSA:2.40.160.180 46 464 1.1E-112 T 15-10-2018 IPR038673 Carbohydrate-selective porin OprB superfamily AM378_19815 b2b10d3d9d62b05c1e77bd7d6c7a3aa7 464 Pfam PF04966 Carbohydrate-selective porin, OprB family 92 464 6.7E-68 T 15-10-2018 IPR007049 Carbohydrate-selective porin OprB GO:0008643|GO:0015288|GO:0016021 AM378_12955 29c5f4df5850148bb9721297fea8ddf2 183 Gene3D G3DSA:3.40.630.30 5 174 9.8E-50 T 15-10-2018 AM378_12955 29c5f4df5850148bb9721297fea8ddf2 183 Pfam PF13302 Acetyltransferase (GNAT) domain 7 141 4.5E-22 T 15-10-2018 IPR000182 GNAT domain AM378_12955 29c5f4df5850148bb9721297fea8ddf2 183 SUPERFAMILY SSF55729 4 164 1.62E-40 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase AM378_08930 be26c17ddbe40db5c8ed3c8aa258637a 453 PIRSF PIRSF006060 1 450 1.2E-75 T 15-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 AM378_08930 be26c17ddbe40db5c8ed3c8aa258637a 453 ProSitePatterns PS00218 Amino acid permeases signature. 43 73 - T 15-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 AM378_08930 be26c17ddbe40db5c8ed3c8aa258637a 453 Gene3D G3DSA:1.20.1740.10 10 453 1.7E-60 T 15-10-2018 AM378_08930 be26c17ddbe40db5c8ed3c8aa258637a 453 Pfam PF00324 Amino acid permease 18 449 6.4E-119 T 15-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 AM378_10810 167c927a6f19d81d28d0be8b8b97c5c0 487 PIRSF PIRSF002457 1 487 3.0E-153 T 15-10-2018 IPR030676 Citrate carrier CitT-related AM378_10810 167c927a6f19d81d28d0be8b8b97c5c0 487 Pfam PF00939 Sodium:sulfate symporter transmembrane region 5 485 1.5E-171 T 15-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 AM378_10810 167c927a6f19d81d28d0be8b8b97c5c0 487 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 25 479 1.5E-160 T 15-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 AM378_04755 3000cc0c73c864cf76ffc2d22d0316ab 177 Gene3D G3DSA:2.60.40.1090 24 176 3.6E-25 T 15-10-2018 IPR036937 Fimbrial-type adhesion domain superfamily GO:0007155|GO:0009289 AM378_04755 3000cc0c73c864cf76ffc2d22d0316ab 177 SUPERFAMILY SSF49401 24 177 1.89E-22 T 15-10-2018 IPR008966 Adhesion domain superfamily AM378_00195 b1b25176b69fd6c03f16217fc0f05535 285 Pfam PF00950 ABC 3 transport family 14 273 1.1E-50 T 15-10-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 AM378_00195 b1b25176b69fd6c03f16217fc0f05535 285 SUPERFAMILY SSF81345 8 270 1.2E-19 T 15-10-2018 IPR037294 ABC transporter, BtuC-like AM378_07735 4d38c99b427fbb812a825331ac5903da 464 PIRSF PIRSF019381 1 464 1.3E-217 T 15-10-2018 IPR007413 Protein of unknown function DUF463, YcjX-like protein AM378_07735 4d38c99b427fbb812a825331ac5903da 464 Pfam PF04317 YcjX-like family, DUF463 20 464 6.1E-187 T 15-10-2018 IPR007413 Protein of unknown function DUF463, YcjX-like protein AM378_22500 1ac204d5fd57d14617b034a9264e1aac 435 Pfam PF07690 Major Facilitator Superfamily 42 384 5.3E-26 T 15-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM378_22500 1ac204d5fd57d14617b034a9264e1aac 435 SUPERFAMILY SSF103473 5 419 5.23E-61 T 15-10-2018 IPR036259 MFS transporter superfamily AM378_22500 1ac204d5fd57d14617b034a9264e1aac 435 Gene3D G3DSA:1.20.1250.20 13 430 6.1E-56 T 15-10-2018 AM378_02875 5db92bcd8249f9eb00b53ca6ddeca4d0 238 Gene3D G3DSA:3.90.550.10 5 215 7.6E-23 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AM378_02875 5db92bcd8249f9eb00b53ca6ddeca4d0 238 SUPERFAMILY SSF53448 17 223 1.76E-28 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AM378_18480 19e8cf1c51831e025ef6c77d3c067e21 263 SUPERFAMILY SSF141868 24 250 2.88E-33 T 15-10-2018 IPR035919 EAL domain superfamily AM378_18480 19e8cf1c51831e025ef6c77d3c067e21 263 Gene3D G3DSA:3.20.20.450 22 252 1.3E-39 T 15-10-2018 IPR035919 EAL domain superfamily AM378_18480 19e8cf1c51831e025ef6c77d3c067e21 263 Pfam PF00563 EAL domain 27 243 1.6E-31 T 15-10-2018 IPR001633 EAL domain AM378_18480 19e8cf1c51831e025ef6c77d3c067e21 263 SMART SM00052 18 248 3.7E-13 T 15-10-2018 IPR001633 EAL domain AM378_12000 ff9ae4942f2984c2ee701f22d7505584 224 SUPERFAMILY SSF52172 1 132 7.12E-39 T 15-10-2018 IPR011006 CheY-like superfamily AM378_12000 ff9ae4942f2984c2ee701f22d7505584 224 SMART SM00448 1 112 1.4E-40 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM378_12000 ff9ae4942f2984c2ee701f22d7505584 224 SUPERFAMILY SSF46894 121 218 2.47E-18 T 15-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AM378_12000 ff9ae4942f2984c2ee701f22d7505584 224 Pfam PF00486 Transcriptional regulatory protein, C terminal 144 217 6.7E-18 T 15-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AM378_12000 ff9ae4942f2984c2ee701f22d7505584 224 Gene3D G3DSA:1.10.10.10 128 221 4.8E-19 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_12000 ff9ae4942f2984c2ee701f22d7505584 224 Pfam PF00072 Response regulator receiver domain 4 113 2.4E-27 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM378_12000 ff9ae4942f2984c2ee701f22d7505584 224 Gene3D G3DSA:3.40.50.2300 1 121 7.7E-39 T 15-10-2018 AM378_12000 ff9ae4942f2984c2ee701f22d7505584 224 SMART SM00862 144 217 2.0E-17 T 15-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AM378_12935 1f4638fe394dfcddc1e521c41a83c0a7 429 Pfam PF00860 Permease family 16 383 1.8E-106 T 15-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 AM378_12935 1f4638fe394dfcddc1e521c41a83c0a7 429 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 11 404 7.3E-129 T 15-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 AM378_12935 1f4638fe394dfcddc1e521c41a83c0a7 429 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 329 349 - T 15-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 AM378_23750 36fe92961cc29cd9c039cfadce558afd 164 SUPERFAMILY SSF49401 40 164 2.19E-22 T 15-10-2018 IPR008966 Adhesion domain superfamily AM378_23750 36fe92961cc29cd9c039cfadce558afd 164 Gene3D G3DSA:2.60.40.1090 42 164 1.0E-36 T 15-10-2018 IPR036937 Fimbrial-type adhesion domain superfamily GO:0007155|GO:0009289 AM378_23750 36fe92961cc29cd9c039cfadce558afd 164 Pfam PF00419 Fimbrial protein 32 164 4.4E-17 T 15-10-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM378_16330 5bac12619de10e70019fdf130475d69a 211 SUPERFAMILY SSF52833 14 110 1.1E-17 T 15-10-2018 IPR036249 Thioredoxin-like superfamily AM378_16330 5bac12619de10e70019fdf130475d69a 211 Pfam PF13417 Glutathione S-transferase, N-terminal domain 15 84 3.6E-12 T 15-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AM378_16330 5bac12619de10e70019fdf130475d69a 211 Gene3D G3DSA:1.20.1050.10 87 195 3.8E-83 T 15-10-2018 AM378_16330 5bac12619de10e70019fdf130475d69a 211 SUPERFAMILY SSF47616 88 203 5.04E-11 T 15-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily AM378_16330 5bac12619de10e70019fdf130475d69a 211 Pfam PF14834 Glutathione S-transferase, C-terminal domain 92 208 9.1E-52 T 15-10-2018 IPR034338 Glutathione S-transferases, subfamily 4, C-terminal KEGG: 00480+2.5.1.18|KEGG: 00980+2.5.1.18|KEGG: 00982+2.5.1.18|KEGG: 00983+2.5.1.18|MetaCyc: PWY-4061|MetaCyc: PWY-6842|MetaCyc: PWY-7112|MetaCyc: PWY-7533 AM378_16330 5bac12619de10e70019fdf130475d69a 211 Gene3D G3DSA:3.40.30.10 8 203 3.8E-83 T 15-10-2018 AM378_08145 1bb166f5f2dbfd1ce65a2cada3e8cdf3 179 TIGRFAM TIGR00997 ispZ: intracellular septation protein A 1 178 8.7E-71 T 15-10-2018 IPR006008 Intracellular septation protein A GO:0016021 AM378_08145 1bb166f5f2dbfd1ce65a2cada3e8cdf3 179 Pfam PF04279 Intracellular septation protein A 1 175 7.1E-71 T 15-10-2018 IPR006008 Intracellular septation protein A GO:0016021 AM378_08145 1bb166f5f2dbfd1ce65a2cada3e8cdf3 179 Hamap MF_00189 Probable intracellular septation protein A [yciB]. 1 176 19.445 T 15-10-2018 IPR006008 Intracellular septation protein A GO:0016021 AM378_04940 8b2ae92968f48e32c968273c8ae89643 378 Pfam PF13884 Chaperone of endosialidase 270 317 2.6E-11 T 15-10-2018 IPR030392 Intramolecular chaperone auto-processing domain AM378_17845 85426641333a7754e0c97896beae46c9 179 Pfam PF05137 Fimbrial assembly protein (PilN) 100 173 2.8E-10 T 15-10-2018 IPR007813 Fimbrial assembly PilN AM378_02845 7a0ee53f46097b191800904e2aa061db 259 PRINTS PR00164 ABC-2 type transport system membrane protein signature 30 51 2.5E-8 T 15-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 AM378_02845 7a0ee53f46097b191800904e2aa061db 259 PRINTS PR00164 ABC-2 type transport system membrane protein signature 140 164 2.5E-8 T 15-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 AM378_02845 7a0ee53f46097b191800904e2aa061db 259 PRINTS PR00164 ABC-2 type transport system membrane protein signature 177 196 2.5E-8 T 15-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 AM378_02845 7a0ee53f46097b191800904e2aa061db 259 PRINTS PR00164 ABC-2 type transport system membrane protein signature 197 216 2.5E-8 T 15-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 AM378_02845 7a0ee53f46097b191800904e2aa061db 259 Pfam PF01061 ABC-2 type transporter 11 218 7.8E-27 T 15-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 AM378_02845 7a0ee53f46097b191800904e2aa061db 259 PIRSF PIRSF006648 1 254 2.6E-14 T 15-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 AM378_14285 662c344c2f44cbb51c37be05acd70543 451 SMART SM00228 115 186 0.5 T 15-10-2018 IPR001478 PDZ domain GO:0005515 AM378_14285 662c344c2f44cbb51c37be05acd70543 451 SMART SM00228 211 280 1.0E-9 T 15-10-2018 IPR001478 PDZ domain GO:0005515 AM378_14285 662c344c2f44cbb51c37be05acd70543 451 Gene3D G3DSA:2.30.42.10 221 310 2.2E-23 T 15-10-2018 AM378_14285 662c344c2f44cbb51c37be05acd70543 451 Pfam PF13180 PDZ domain 213 286 2.2E-9 T 15-10-2018 IPR001478 PDZ domain GO:0005515 AM378_14285 662c344c2f44cbb51c37be05acd70543 451 TIGRFAM TIGR00054 TIGR00054: RIP metalloprotease RseP 3 451 1.1E-158 T 15-10-2018 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase GO:0004222|GO:0006508|GO:0016021 AM378_14285 662c344c2f44cbb51c37be05acd70543 451 SUPERFAMILY SSF50156 86 192 2.23E-11 T 15-10-2018 IPR036034 PDZ superfamily GO:0005515 AM378_14285 662c344c2f44cbb51c37be05acd70543 451 Pfam PF02163 Peptidase family M50 10 439 3.3E-87 T 15-10-2018 IPR008915 Peptidase M50 GO:0004222|GO:0006508 Reactome: R-HSA-1655829|Reactome: R-HSA-381033|Reactome: R-HSA-8874211|Reactome: R-HSA-8963889 AM378_14285 662c344c2f44cbb51c37be05acd70543 451 Gene3D G3DSA:2.30.42.10 127 220 1.3E-32 T 15-10-2018 AM378_14285 662c344c2f44cbb51c37be05acd70543 451 SUPERFAMILY SSF50156 195 292 6.18E-19 T 15-10-2018 IPR036034 PDZ superfamily GO:0005515 AM378_09185 04aa7f38316a76dc054450f5564c1066 320 Gene3D G3DSA:3.40.50.720 1 314 1.1E-48 T 15-10-2018 AM378_09185 04aa7f38316a76dc054450f5564c1066 320 SUPERFAMILY SSF51735 1 265 1.07E-51 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily AM378_09185 04aa7f38316a76dc054450f5564c1066 320 Pfam PF01370 NAD dependent epimerase/dehydratase family 7 216 3.8E-30 T 15-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 AM378_01710 4c6d786332c47f19d7325d37294b0e1f 113 SMART SM00507 15 70 1.4E-5 T 15-10-2018 IPR003615 HNH nuclease AM378_01710 4c6d786332c47f19d7325d37294b0e1f 113 Pfam PF01844 HNH endonuclease 27 75 9.5E-12 T 15-10-2018 IPR002711 HNH endonuclease GO:0003676|GO:0004519 AM378_19120 e33b08e312ae33e6f48e4bbacbafabc8 179 Hamap MF_01058 Der GTPase-activating protein YihI [yihI]. 1 173 17.391 T 15-10-2018 IPR007336 Der GTPase activator GO:0005096 AM378_19120 e33b08e312ae33e6f48e4bbacbafabc8 179 Pfam PF04220 Der GTPase activator (YihI) 14 170 4.3E-56 T 15-10-2018 IPR007336 Der GTPase activator GO:0005096 AM378_13840 a90b332ddf9ff7bf26234b349ef082b6 537 Pfam PF10749 Protein of unknown function (DUF2534) 458 534 2.8E-26 T 15-10-2018 IPR019685 Protein of unknown function DUF2534 AM378_13840 a90b332ddf9ff7bf26234b349ef082b6 537 Pfam PF03929 PepSY-associated TM region 6 384 5.8E-63 T 15-10-2018 IPR005625 PepSY-associated TM protein AM378_03345 cb5dc1a9e04df881d2d9532366cc1998 298 Pfam PF03956 Lysine exporter LysO 113 297 4.6E-58 T 15-10-2018 IPR005642 Lysine exporter LysO AM378_03345 cb5dc1a9e04df881d2d9532366cc1998 298 ProDom PD022789 MEMBRANE SURFACE PRECURSOR SIGNAL PROTEIN YBJE TRANSMEMBRANE INNER PREDICTED STY0934 152 284 3.0E-51 T 15-10-2018 IPR005642 Lysine exporter LysO AM378_02965 6e156f581011a41d2766384fdb64effc 366 Gene3D G3DSA:2.120.10.30 17 365 3.7E-132 T 15-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like AM378_02965 6e156f581011a41d2766384fdb64effc 366 SUPERFAMILY SSF50952 23 363 5.36E-38 T 15-10-2018 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 AM378_02965 6e156f581011a41d2766384fdb64effc 366 Pfam PF07995 Glucose / Sorbosone dehydrogenase 30 362 4.0E-133 T 15-10-2018 IPR012938 Glucose/Sorbosone dehydrogenase AM378_22805 a146f8b0e969ebab6f1d305d0080f3b0 106 Hamap MF_00910 Cell division protein FtsL [ftsL]. 20 103 16.838 T 15-10-2018 IPR011922 Cell division protein FtsL GO:0016021|GO:0051301 AM378_22805 a146f8b0e969ebab6f1d305d0080f3b0 106 TIGRFAM TIGR02209 ftsL_broad: cell division protein FtsL 22 103 2.9E-26 T 15-10-2018 IPR011922 Cell division protein FtsL GO:0016021|GO:0051301 AM378_22805 a146f8b0e969ebab6f1d305d0080f3b0 106 Pfam PF04999 Cell division protein FtsL 11 104 2.6E-33 T 15-10-2018 IPR011922 Cell division protein FtsL GO:0016021|GO:0051301 AM378_11880 cc15c6310b3453a908288bbe19044edd 147 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 5 145 1.4E-35 T 15-10-2018 IPR002178 PTS EIIA type-2 domain AM378_11880 cc15c6310b3453a908288bbe19044edd 147 Gene3D G3DSA:3.40.930.10 1 147 8.4E-51 T 15-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 AM378_11880 cc15c6310b3453a908288bbe19044edd 147 SUPERFAMILY SSF55804 2 145 8.24E-39 T 15-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 AM378_18350 9830549be8b153b7a281dce8d496174f 329 Pfam PF02653 Branched-chain amino acid transport system / permease component 41 312 9.3E-44 T 15-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 AM378_08750 520111631fb646bbb05ad20b6b1c7a9a 382 SUPERFAMILY SSF53383 1 377 4.26E-92 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM378_08750 520111631fb646bbb05ad20b6b1c7a9a 382 TIGRFAM TIGR04350 C_S_lyase_PatB: putative C-S lyase 5 377 1.2E-128 T 15-10-2018 IPR027619 Putative C-S lyase KEGG: 00270+4.4.1.8|KEGG: 00450+4.4.1.8 AM378_08750 520111631fb646bbb05ad20b6b1c7a9a 382 Gene3D G3DSA:3.90.1150.10 13 373 1.6E-123 T 15-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AM378_08750 520111631fb646bbb05ad20b6b1c7a9a 382 Pfam PF00155 Aminotransferase class I and II 34 372 4.4E-32 T 15-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AM378_08750 520111631fb646bbb05ad20b6b1c7a9a 382 Gene3D G3DSA:3.40.640.10 64 287 1.6E-123 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AM378_04850 2a3e4278371f8973d8159bf8bf95b420 284 Pfam PF00793 DAHP synthetase I family 10 275 3.5E-67 T 15-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 AM378_04850 2a3e4278371f8973d8159bf8bf95b420 284 Hamap MF_00056 2-dehydro-3-deoxyphosphooctonate aldolase [kdsA]. 13 277 49.358 T 15-10-2018 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 AM378_04850 2a3e4278371f8973d8159bf8bf95b420 284 TIGRFAM TIGR01362 KDO8P_synth: 3-deoxy-8-phosphooctulonate synthase 18 275 2.2E-118 T 15-10-2018 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 AM378_04850 2a3e4278371f8973d8159bf8bf95b420 284 Gene3D G3DSA:3.20.20.70 1 284 2.5E-98 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM378_04850 2a3e4278371f8973d8159bf8bf95b420 284 SUPERFAMILY SSF51569 3 278 3.76E-103 T 15-10-2018 AM378_15710 74ab0cae7d0670fd9fa253341d4bed4f 182 SUPERFAMILY SSF49401 31 182 7.95E-39 T 15-10-2018 IPR008966 Adhesion domain superfamily AM378_15710 74ab0cae7d0670fd9fa253341d4bed4f 182 Gene3D G3DSA:2.60.40.1090 43 182 2.9E-39 T 15-10-2018 IPR036937 Fimbrial-type adhesion domain superfamily GO:0007155|GO:0009289 AM378_15710 74ab0cae7d0670fd9fa253341d4bed4f 182 Pfam PF00419 Fimbrial protein 33 182 1.8E-16 T 15-10-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM378_18185 04104fee7324f2b2f259eb7c017ff29e 183 SUPERFAMILY SSF49401 29 182 2.14E-31 T 15-10-2018 IPR008966 Adhesion domain superfamily AM378_18185 04104fee7324f2b2f259eb7c017ff29e 183 Gene3D G3DSA:2.60.40.1090 41 182 1.7E-26 T 15-10-2018 IPR036937 Fimbrial-type adhesion domain superfamily GO:0007155|GO:0009289 AM378_20460 ae31a5810e3044ce243d56b28560c7f8 185 TIGRFAM TIGR01410 tatB: twin arginine-targeting protein translocase TatB 2 80 5.5E-32 T 15-10-2018 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 AM378_20460 ae31a5810e3044ce243d56b28560c7f8 185 Hamap MF_00237 Sec-independent protein translocase protein TatB [tatB]. 1 168 19.411 T 15-10-2018 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 AM378_20460 ae31a5810e3044ce243d56b28560c7f8 185 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 1 21 3.9E-32 T 15-10-2018 AM378_20460 ae31a5810e3044ce243d56b28560c7f8 185 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 21 40 3.9E-32 T 15-10-2018 AM378_20460 ae31a5810e3044ce243d56b28560c7f8 185 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 40 58 3.9E-32 T 15-10-2018 AM378_23680 0071e09ca14e5e5cfa667ad920d7253e 111 ProDom PD070475 P4 PHAGE PROPHAGE-DERIVED CNR-LIKE ORF106 T2655 4 104 3.0E-16 T 15-10-2018 IPR035317 Protein of unknown function DUF5375 AM378_23680 0071e09ca14e5e5cfa667ad920d7253e 111 Pfam PF17345 Family of unknown function (DUF5375) 6 102 2.5E-23 T 15-10-2018 IPR035317 Protein of unknown function DUF5375 AM378_02185 3925017088c9397a29b43fcdc9bc3656 211 Gene3D G3DSA:3.40.1050.10 1 202 3.4E-68 T 15-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 AM378_02185 3925017088c9397a29b43fcdc9bc3656 211 SUPERFAMILY SSF53056 1 203 3.01E-65 T 15-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 AM378_02185 3925017088c9397a29b43fcdc9bc3656 211 Pfam PF00484 Carbonic anhydrase 34 189 9.4E-48 T 15-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 AM378_02185 3925017088c9397a29b43fcdc9bc3656 211 ProSitePatterns PS00704 Prokaryotic-type carbonic anhydrases signature 1. 39 46 - T 15-10-2018 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 AM378_02185 3925017088c9397a29b43fcdc9bc3656 211 SMART SM00947 27 193 9.8E-64 T 15-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 AM378_02185 3925017088c9397a29b43fcdc9bc3656 211 ProSitePatterns PS00705 Prokaryotic-type carbonic anhydrases signature 2. 82 102 - T 15-10-2018 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 AM378_00360 0aa42c87dfae3d91ef35105e9e961635 94 Gene3D G3DSA:3.10.20.30 5 94 1.7E-20 T 15-10-2018 IPR012675 Beta-grasp domain superfamily AM378_00360 0aa42c87dfae3d91ef35105e9e961635 94 SUPERFAMILY SSF54292 22 93 2.49E-19 T 15-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 AM378_00360 0aa42c87dfae3d91ef35105e9e961635 94 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 24 84 2.1E-9 T 15-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AM378_02930 6a1ac261f08c5e67a56f148fa28321d6 274 Pfam PF01370 NAD dependent epimerase/dehydratase family 9 213 5.1E-7 T 15-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 AM378_02930 6a1ac261f08c5e67a56f148fa28321d6 274 Gene3D G3DSA:3.40.50.720 1 270 1.2E-59 T 15-10-2018 AM378_02930 6a1ac261f08c5e67a56f148fa28321d6 274 SUPERFAMILY SSF51735 2 266 5.05E-32 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily AM378_23985 044243764ff1589a173dee4873d49a21 256 Pfam PF08241 Methyltransferase domain 50 146 3.0E-26 T 15-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 AM378_23985 044243764ff1589a173dee4873d49a21 256 Gene3D G3DSA:3.40.50.150 25 254 4.0E-62 T 15-10-2018 AM378_23985 044243764ff1589a173dee4873d49a21 256 SUPERFAMILY SSF53335 12 248 9.29E-51 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM378_09760 eb5a6ba93d31dc84928616f89e949302 134 Pfam PF06366 Flagellar protein FlhE 29 134 1.0E-37 T 15-10-2018 IPR009420 Flagellar protein FlhE AM378_03905 3c19a609ce1a00d1c118e4b0204e7157 167 Pfam PF09335 SNARE associated Golgi protein 40 160 7.5E-14 T 15-10-2018 IPR032816 SNARE associated Golgi protein AM378_19600 1b926194427c4fd22eaacb9e83ddc2ea 202 Pfam PF01810 LysE type translocator 12 194 5.0E-13 T 15-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AM378_05065 fbcc0c2787ff6d65ac01b467a9dab2be 139 SUPERFAMILY SSF55729 2 123 5.23E-23 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase AM378_05065 fbcc0c2787ff6d65ac01b467a9dab2be 139 Pfam PF00583 Acetyltransferase (GNAT) family 31 116 6.0E-10 T 15-10-2018 IPR000182 GNAT domain AM378_05065 fbcc0c2787ff6d65ac01b467a9dab2be 139 Gene3D G3DSA:3.40.630.30 2 136 1.0E-33 T 15-10-2018 AM378_09440 f0933c2f6073ce5d6c706792230a29c3 762 Pfam PF05840 Bacteriophage replication gene A protein (GPA) 136 465 8.2E-100 T 15-10-2018 IPR008766 Replication gene A protein GO:0006260 AM378_11570 fbfea952729237892dda44226b230d16 109 Gene3D G3DSA:3.30.1450.10 21 109 3.4E-27 T 15-10-2018 IPR037873 BamE-like AM378_11570 fbfea952729237892dda44226b230d16 109 Pfam PF04355 SmpA / OmlA family 29 96 5.6E-16 T 15-10-2018 IPR007450 Lipoprotein SmpA/OmlA GO:0019867 AM378_01190 0f0ffce5326246b8ab3e2d337321d579 344 Pfam PF01435 Peptidase family M48 157 339 2.4E-24 T 15-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 AM378_05125 5e18e6cc9ccc21fac40737933682c5b3 225 SUPERFAMILY SSF52499 12 210 3.92E-45 T 15-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 AM378_05125 5e18e6cc9ccc21fac40737933682c5b3 225 Pfam PF00857 Isochorismatase family 20 172 8.8E-20 T 15-10-2018 IPR000868 Isochorismatase-like GO:0003824 AM378_05125 5e18e6cc9ccc21fac40737933682c5b3 225 Gene3D G3DSA:3.40.50.850 11 215 5.9E-48 T 15-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 AM378_10175 986f7712707a15db52fd2c56e07b0f62 369 Pfam PF04107 Glutamate-cysteine ligase family 2(GCS2) 14 286 1.2E-51 T 15-10-2018 IPR006336 Glutamate--cysteine ligase, GCS2 GO:0004357|GO:0042398 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 AM378_10175 986f7712707a15db52fd2c56e07b0f62 369 Gene3D G3DSA:3.30.590.20 3 366 6.4E-92 T 15-10-2018 AM378_10175 986f7712707a15db52fd2c56e07b0f62 369 SUPERFAMILY SSF55931 4 364 3.43E-87 T 15-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 AM378_10175 986f7712707a15db52fd2c56e07b0f62 369 TIGRFAM TIGR02050 gshA_cyan_rel: carboxylate-amine ligase, YbdK family 13 292 1.3E-81 T 15-10-2018 IPR011793 Putative glutamate--cysteine ligase YbdK GO:0016879 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 AM378_10175 986f7712707a15db52fd2c56e07b0f62 369 Hamap MF_01609 Glutamate--cysteine ligase [gshA]. 1 369 69.849 T 15-10-2018 IPR011793 Putative glutamate--cysteine ligase YbdK GO:0016879 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 AM378_11100 bda682b01144ccf9cf6e73ec5c10c990 264 SUPERFAMILY SSF52540 20 241 9.39E-12 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_11100 bda682b01144ccf9cf6e73ec5c10c990 264 Gene3D G3DSA:3.40.50.300 19 242 2.2E-24 T 15-10-2018 AM378_23745 0b90f122945d9c907843db6e1ad69be8 217 SUPERFAMILY SSF49401 59 217 2.14E-28 T 15-10-2018 IPR008966 Adhesion domain superfamily AM378_23745 0b90f122945d9c907843db6e1ad69be8 217 Gene3D G3DSA:2.60.40.1090 70 217 5.9E-28 T 15-10-2018 IPR036937 Fimbrial-type adhesion domain superfamily GO:0007155|GO:0009289 AM378_11585 0f128f14de4bf8cda73a53339cba2d00 138 Gene3D G3DSA:3.10.180.10 9 137 3.2E-30 T 15-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AM378_11585 0f128f14de4bf8cda73a53339cba2d00 138 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 11 129 2.8E-9 T 15-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AM378_11585 0f128f14de4bf8cda73a53339cba2d00 138 SUPERFAMILY SSF54593 11 135 1.34E-25 T 15-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AM378_18295 1692b4601798a4103ffe7c73e592db52 500 Pfam PF01384 Phosphate transporter family 30 489 1.3E-88 T 15-10-2018 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: R-HSA-427652 AM378_10105 af58a167f2f5ccec5295b96a2f3eb7fe 305 Pfam PF16220 Domain of unknown function (DUF4880) 12 53 4.5E-11 T 15-10-2018 IPR032623 FecR, N-terminal AM378_10105 af58a167f2f5ccec5295b96a2f3eb7fe 305 Pfam PF04773 FecR protein 109 195 6.0E-9 T 15-10-2018 IPR006860 FecR protein AM378_10105 af58a167f2f5ccec5295b96a2f3eb7fe 305 PIRSF PIRSF018266 1 305 1.0E-68 T 15-10-2018 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component AM378_06665 24667416159a72cb16a6105a9711424b 388 SUPERFAMILY SSF56601 8 379 1.61E-90 T 15-10-2018 IPR012338 Beta-lactamase/transpeptidase-like AM378_06665 24667416159a72cb16a6105a9711424b 388 Pfam PF00144 Beta-lactamase 12 363 1.0E-65 T 15-10-2018 IPR001466 Beta-lactamase-related AM378_06665 24667416159a72cb16a6105a9711424b 388 Gene3D G3DSA:3.40.710.10 3 381 4.6E-109 T 15-10-2018 AM378_15890 c2351d0fd5690a571fdecab639a06a79 310 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 252 265 - T 15-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 AM378_15890 c2351d0fd5690a571fdecab639a06a79 310 Pfam PF00294 pfkB family carbohydrate kinase 10 297 2.6E-41 T 15-10-2018 IPR011611 Carbohydrate kinase PfkB AM378_15890 c2351d0fd5690a571fdecab639a06a79 310 SUPERFAMILY SSF53613 9 306 9.35E-56 T 15-10-2018 IPR029056 Ribokinase-like AM378_15890 c2351d0fd5690a571fdecab639a06a79 310 Gene3D G3DSA:3.40.1190.20 3 307 1.6E-59 T 15-10-2018 IPR029056 Ribokinase-like AM378_09460 30040e09a206a7cc23b9bc409436e0db 85 ProDom PD057914 C0939 STY4639 GPA GP33 PRECURSOR FELS-2 5'REGION STY3665 SIGNAL PHAGE-RELATED 38 73 0.01 T 15-10-2018 IPR020126 Protein of unknown function DUF2732 AM378_09460 30040e09a206a7cc23b9bc409436e0db 85 Pfam PF10809 Protein of unknown function (DUF2732) 7 76 3.0E-22 T 15-10-2018 IPR020126 Protein of unknown function DUF2732 AM378_08315 a555241abb9db6fc02db97f59cbf18a7 305 Gene3D G3DSA:3.90.550.10 2 304 4.7E-88 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AM378_08315 a555241abb9db6fc02db97f59cbf18a7 305 TIGRFAM TIGR01099 galU: UTP--glucose-1-phosphate uridylyltransferase 8 277 4.1E-115 T 15-10-2018 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343|MetaCyc: PWY-7817 AM378_08315 a555241abb9db6fc02db97f59cbf18a7 305 SUPERFAMILY SSF53448 8 294 5.41E-61 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AM378_08315 a555241abb9db6fc02db97f59cbf18a7 305 Pfam PF00483 Nucleotidyl transferase 10 278 1.3E-24 T 15-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 AM378_05740 8e42435e536fc3e1ab94d96890c7b4ad 101 Gene3D G3DSA:2.60.120.10 2 101 1.0E-11 T 15-10-2018 IPR014710 RmlC-like jelly roll fold AM378_05740 8e42435e536fc3e1ab94d96890c7b4ad 101 SUPERFAMILY SSF51182 12 97 1.63E-11 T 15-10-2018 IPR011051 RmlC-like cupin domain superfamily AM378_12920 9e9fd22583d8537a50349b0bf64326a4 171 Gene3D G3DSA:1.20.120.20 23 156 1.1E-7 T 15-10-2018 AM378_12920 9e9fd22583d8537a50349b0bf64326a4 171 SUPERFAMILY SSF58113 28 155 5.1E-7 T 15-10-2018 AM378_16830 c21763dd47a9a5a93ef8787b448c3f33 254 Pfam PF02611 CDP-diacylglycerol pyrophosphatase 26 251 3.4E-74 T 15-10-2018 IPR003763 CDP-diacylglycerol pyrophosphatase GO:0008654|GO:0008715|GO:0016020 KEGG: 00564+3.6.1.26 AM378_16830 c21763dd47a9a5a93ef8787b448c3f33 254 Gene3D G3DSA:3.30.428.30 21 253 8.3E-71 T 15-10-2018 IPR038433 CDP-diacylglycerol pyrophosphatase superfamily KEGG: 00564+3.6.1.26 AM378_16830 c21763dd47a9a5a93ef8787b448c3f33 254 SUPERFAMILY SSF54197 26 251 8.51E-61 T 15-10-2018 IPR036265 HIT-like superfamily AM378_16830 c21763dd47a9a5a93ef8787b448c3f33 254 PIRSF PIRSF001273 16 254 7.6E-55 T 15-10-2018 IPR003763 CDP-diacylglycerol pyrophosphatase GO:0008654|GO:0008715|GO:0016020 KEGG: 00564+3.6.1.26 AM378_01910 9e7178c88997c4b8d36a037902200a8d 358 TIGRFAM TIGR03408 urea_trans_UrtC: urea ABC transporter, permease protein UrtC 42 351 2.2E-130 T 15-10-2018 IPR017778 ABC transporter, urea, permease protein, UrtC AM378_01910 9e7178c88997c4b8d36a037902200a8d 358 Pfam PF02653 Branched-chain amino acid transport system / permease component 51 340 7.7E-41 T 15-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 AM378_00565 6fa23ef970f249cee755fd4fdf78b88b 108 SUPERFAMILY SSF110857 1 106 4.05E-18 T 15-10-2018 IPR036568 Gamma-glutamyl cyclotransferase-like superfamily AM378_00565 6fa23ef970f249cee755fd4fdf78b88b 108 Pfam PF06094 Gamma-glutamyl cyclotransferase, AIG2-like 4 107 1.8E-14 T 15-10-2018 IPR009288 Gamma-glutamylcyclotransferase, AIG2-like AM378_00565 6fa23ef970f249cee755fd4fdf78b88b 108 Gene3D G3DSA:3.10.490.10 2 108 1.7E-18 T 15-10-2018 AM378_16200 6c7212e7bea8de1e7077dbcac73b69a1 67 Gene3D G3DSA:3.10.350.10 1 67 2.3E-31 T 15-10-2018 IPR036779 LysM domain superfamily AM378_16200 6c7212e7bea8de1e7077dbcac73b69a1 67 Pfam PF05489 Phage Tail Protein X 1 59 3.3E-28 T 15-10-2018 IPR008861 Phage Tail Protein X-like AM378_23730 83ac0d4a82871ed61fb036674801054e 181 SUPERFAMILY SSF49401 34 180 1.14E-33 T 15-10-2018 IPR008966 Adhesion domain superfamily AM378_23730 83ac0d4a82871ed61fb036674801054e 181 Gene3D G3DSA:2.60.40.1090 46 180 8.4E-30 T 15-10-2018 IPR036937 Fimbrial-type adhesion domain superfamily GO:0007155|GO:0009289 AM378_01185 a82f9fb1610b7e338f151dd8cdb43d24 396 Pfam PF05987 Bacterial protein of unknown function (DUF898) 12 389 1.2E-95 T 15-10-2018 IPR010295 Protein of unknown function DUF898 AM378_05260 e6356de5a488820b096c1e4f33283feb 447 Pfam PF03390 2-hydroxycarboxylate transporter family 31 440 2.4E-144 T 15-10-2018 IPR004679 2-hydroxycarboxylate transporter GO:0008514|GO:0015711|GO:0016021 AM378_05260 e6356de5a488820b096c1e4f33283feb 447 PIRSF PIRSF005348 11 447 6.0E-160 T 15-10-2018 IPR004679 2-hydroxycarboxylate transporter GO:0008514|GO:0015711|GO:0016021 AM378_22880 42f9c0d9d5c5b7efc89423cd03778255 176 Hamap MF_01332 Secretion monitor [secM]. 1 176 41.184 T 15-10-2018 IPR009502 Secretion monitor GO:0045182 AM378_22880 42f9c0d9d5c5b7efc89423cd03778255 176 PIRSF PIRSF004572 1 176 4.8E-75 T 15-10-2018 IPR009502 Secretion monitor GO:0045182 AM378_22880 42f9c0d9d5c5b7efc89423cd03778255 176 ProDom PD089227 MONITOR PERIPLASMIC SECRETION PRECURSOR SIGNAL YACA 1 175 8.0E-55 T 15-10-2018 IPR009502 Secretion monitor GO:0045182 AM378_22880 42f9c0d9d5c5b7efc89423cd03778255 176 Pfam PF06558 Secretion monitor precursor protein (SecM) 24 173 6.5E-56 T 15-10-2018 IPR009502 Secretion monitor GO:0045182 AM378_18275 e6d26f9d8ffc141702c8c2f0a4690b24 982 Pfam PF07520 Virulence factor SrfB 2 979 0.0 T 15-10-2018 IPR009216 Virulence factor SrfB AM378_18275 e6d26f9d8ffc141702c8c2f0a4690b24 982 PIRSF PIRSF034585 2 982 0.0 T 15-10-2018 IPR009216 Virulence factor SrfB AM378_09665 6334c96614aafba1ba56a2ed6435c006 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 80 99 3.8E-31 T 15-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 AM378_09665 6334c96614aafba1ba56a2ed6435c006 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 180 202 3.8E-31 T 15-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 AM378_09665 6334c96614aafba1ba56a2ed6435c006 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 22 43 3.8E-31 T 15-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 AM378_09665 6334c96614aafba1ba56a2ed6435c006 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 202 221 3.8E-31 T 15-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 AM378_09665 6334c96614aafba1ba56a2ed6435c006 260 Pfam PF01311 Bacterial export proteins, family 1 15 246 2.0E-67 T 15-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 AM378_09665 6334c96614aafba1ba56a2ed6435c006 260 TIGRFAM TIGR01400 fliR: flagellar biosynthetic protein FliR 14 254 8.6E-74 T 15-10-2018 IPR006303 Flagellar biosynthesis protein FliR GO:0016021|GO:0044780 AM378_03135 53a0ee1e2cb21f5523cb57df4c9a209f 256 SMART SM00248 69 106 590.0 T 15-10-2018 IPR002110 Ankyrin repeat GO:0005515 AM378_03135 53a0ee1e2cb21f5523cb57df4c9a209f 256 SMART SM00248 145 174 49.0 T 15-10-2018 IPR002110 Ankyrin repeat GO:0005515 AM378_03135 53a0ee1e2cb21f5523cb57df4c9a209f 256 SMART SM00248 178 207 51.0 T 15-10-2018 IPR002110 Ankyrin repeat GO:0005515 AM378_03135 53a0ee1e2cb21f5523cb57df4c9a209f 256 Gene3D G3DSA:1.25.40.20 20 229 6.6E-20 T 15-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily AM378_03135 53a0ee1e2cb21f5523cb57df4c9a209f 256 SUPERFAMILY SSF48403 62 214 3.42E-18 T 15-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily AM378_05590 e10ee059f289743e2822fc876f16f66b 130 Gene3D G3DSA:1.10.3730.20 25 128 2.0E-7 T 15-10-2018 AM378_05590 e10ee059f289743e2822fc876f16f66b 130 SUPERFAMILY SSF103481 41 124 5.23E-9 T 15-10-2018 AM378_05590 e10ee059f289743e2822fc876f16f66b 130 Hamap MF_00538 Probable 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF [arnF]. 2 126 22.815 T 15-10-2018 IPR022832 Probable 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF AM378_09945 ecef37072fcd0ef040d1986539254087 127 Gene3D G3DSA:1.10.890.40 24 127 2.6E-42 T 15-10-2018 AM378_16110 76e89f0296476d7968599c6baadd598a 942 Pfam PF10145 Phage-related minor tail protein 240 440 1.7E-45 T 15-10-2018 IPR010090 Phage tail tape measure protein AM378_16110 76e89f0296476d7968599c6baadd598a 942 TIGRFAM TIGR01760 tape_meas_TP901: phage tail tape measure protein, TP901 family, core region 207 548 2.1E-82 T 15-10-2018 IPR010090 Phage tail tape measure protein AM378_06175 766cf246009a03c680e33d62646215f4 164 Pfam PF11158 Protein of unknown function (DUF2938) 10 157 7.6E-51 T 15-10-2018 IPR021329 Protein of unknown function DUF2938 AM378_14655 f87213c80e1893522b80f0a669c5ed18 183 Gene3D G3DSA:1.10.443.10 1 182 7.0E-43 T 15-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 AM378_14655 f87213c80e1893522b80f0a669c5ed18 183 Pfam PF00589 Phage integrase family 5 174 3.4E-45 T 15-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AM378_14655 f87213c80e1893522b80f0a669c5ed18 183 SUPERFAMILY SSF56349 2 179 2.15E-45 T 15-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AM378_24310 9b329014432510c07a55d94b6a892ccb 463 Pfam PF07690 Major Facilitator Superfamily 29 363 2.4E-43 T 15-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM378_24310 9b329014432510c07a55d94b6a892ccb 463 Gene3D G3DSA:1.20.1250.20 12 398 3.1E-101 T 15-10-2018 AM378_24310 9b329014432510c07a55d94b6a892ccb 463 Gene3D G3DSA:3.30.70.100 399 462 1.1E-28 T 15-10-2018 AM378_24310 9b329014432510c07a55d94b6a892ccb 463 SUPERFAMILY SSF103473 15 400 2.22E-64 T 15-10-2018 IPR036259 MFS transporter superfamily AM378_08800 789d6cda597a13b88c6a2385d552cf2c 546 Pfam PF03109 ABC1 family 114 232 2.0E-33 T 15-10-2018 IPR004147 UbiB domain AM378_08800 789d6cda597a13b88c6a2385d552cf2c 546 SUPERFAMILY SSF56112 100 427 1.02E-25 T 15-10-2018 IPR011009 Protein kinase-like domain superfamily AM378_14615 5edd57ffe2e2d9769c43807667b24f46 297 Pfam PF03613 PTS system mannose/fructose/sorbose family IID component 41 297 7.7E-95 T 15-10-2018 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component GO:0009401|GO:0016021 AM378_18075 7660a19c2e5201c8af648f276fc61973 175 SUPERFAMILY SSF52540 1 169 7.1E-26 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_18075 7660a19c2e5201c8af648f276fc61973 175 TIGRFAM TIGR01313 therm_gnt_kin: carbohydrate kinase, thermoresistant glucokinase family 9 169 5.0E-63 T 15-10-2018 IPR006001 Carbohydrate kinase, thermoresistant glucokinase GO:0005975|GO:0016301 KEGG: 00030+2.7.1.12|MetaCyc: PWY-5530 AM378_18075 7660a19c2e5201c8af648f276fc61973 175 Gene3D G3DSA:3.40.50.300 1 172 2.3E-59 T 15-10-2018 AM378_18075 7660a19c2e5201c8af648f276fc61973 175 Pfam PF13671 AAA domain 8 125 9.2E-9 T 15-10-2018 AM378_14695 4de255c9751c46b84e61f08687b13ecf 182 Pfam PF00589 Phage integrase family 6 175 2.5E-40 T 15-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AM378_14695 4de255c9751c46b84e61f08687b13ecf 182 Gene3D G3DSA:1.10.443.10 4 182 8.7E-38 T 15-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 AM378_14695 4de255c9751c46b84e61f08687b13ecf 182 SUPERFAMILY SSF56349 5 181 1.29E-41 T 15-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AM378_08970 115a04cd27d86f3776bae8923487398f 70 Pfam PF13993 YccJ-like protein 4 70 4.7E-38 T 15-10-2018 IPR025600 YccJ-like protein AM378_16960 84469a7231658543090d5fc3bf287695 229 Pfam PF04172 LrgB-like family 14 224 6.9E-71 T 15-10-2018 IPR007300 CidB/LrgB family AM378_15680 d74d2fa52365c29cbbaa84b86cc4f57f 145 SUPERFAMILY SSF49401 20 145 3.08E-22 T 15-10-2018 IPR008966 Adhesion domain superfamily AM378_15680 d74d2fa52365c29cbbaa84b86cc4f57f 145 Pfam PF00419 Fimbrial protein 12 145 6.4E-16 T 15-10-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM378_15680 d74d2fa52365c29cbbaa84b86cc4f57f 145 Gene3D G3DSA:2.60.40.1090 21 145 1.4E-33 T 15-10-2018 IPR036937 Fimbrial-type adhesion domain superfamily GO:0007155|GO:0009289 AM378_10010 d1600b7e1f37d5ac17d063270508ad31 356 TIGRFAM TIGR03347 VI_chp_1: type VI secretion protein, VC_A0111 family 33 334 6.5E-97 T 15-10-2018 IPR010732 Type VI secretion, TssG-like AM378_10010 d1600b7e1f37d5ac17d063270508ad31 356 Pfam PF06996 Type VI secretion, TssG 33 333 2.4E-102 T 15-10-2018 IPR010732 Type VI secretion, TssG-like AM378_05425 16534d8b9a9fbd00e44da10f0964e735 186 ProDom PD035714 MEMBRANE REGULATOR YNIB TRANSMEMBRANE YFEABCD YFEE PROBABLE LOCUS ESCHERICHIA ECS2432 1 180 1.0E-77 T 15-10-2018 AM378_05425 16534d8b9a9fbd00e44da10f0964e735 186 Pfam PF14002 YniB-like protein 15 180 1.6E-81 T 15-10-2018 IPR025229 YniB-like protein AM378_10435 4f7aa0b45614de3b5e0c82198814f8b1 131 SUPERFAMILY SSF51182 6 130 8.89E-34 T 15-10-2018 IPR011051 RmlC-like cupin domain superfamily AM378_10435 4f7aa0b45614de3b5e0c82198814f8b1 131 Pfam PF07883 Cupin domain 41 105 3.5E-13 T 15-10-2018 IPR013096 Cupin 2, conserved barrel AM378_10435 4f7aa0b45614de3b5e0c82198814f8b1 131 Gene3D G3DSA:2.60.120.10 1 131 1.7E-52 T 15-10-2018 IPR014710 RmlC-like jelly roll fold AM378_13305 28ad22b6c82cc9736327a0845fd3cd99 318 Pfam PF03547 Membrane transport protein 14 148 7.6E-9 T 15-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 AM378_13305 28ad22b6c82cc9736327a0845fd3cd99 318 Pfam PF03547 Membrane transport protein 169 307 6.0E-11 T 15-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 AM378_13305 28ad22b6c82cc9736327a0845fd3cd99 318 Gene3D G3DSA:1.20.1530.20 164 316 4.6E-6 T 15-10-2018 IPR038770 Sodium/solute symporter superfamily AM378_05880 f419d96cfdfe1099af831e8b862c1c1c 78 Pfam PF07869 Protein of unknown function (DUF1656) 19 69 2.1E-14 T 15-10-2018 IPR012451 Protein of unknown function DUF1656 AM378_07325 be62c8384b7f8c1b09862d6aa386b186 498 SUPERFAMILY SSF53474 82 460 1.3E-20 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold AM378_07325 be62c8384b7f8c1b09862d6aa386b186 498 Pfam PF00561 alpha/beta hydrolase fold 97 470 2.4E-34 T 15-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AM378_14340 eec8acca6e4bf95ee9c5e6a80b378fd0 129 Hamap MF_01519 UPF0325 protein YaeH [yaeH]. 1 126 31.948 T 15-10-2018 IPR020911 Uncharacterised protein family UPF0325 AM378_14340 eec8acca6e4bf95ee9c5e6a80b378fd0 129 Pfam PF11944 Protein of unknown function (DUF3461) 1 125 2.3E-54 T 15-10-2018 IPR020911 Uncharacterised protein family UPF0325 AM378_14340 eec8acca6e4bf95ee9c5e6a80b378fd0 129 ProDom PD080106 UPF0325 YAEH STRUCTURAL ECA1027 VV11856 YPTB3007 PBPRA2971 VV2560 VF1965 VC2264 1 125 1.0E-62 T 15-10-2018 IPR020911 Uncharacterised protein family UPF0325 AM378_19455 b45a10435dca6610f80743a573aeabd1 322 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 17 305 1.0E-80 T 15-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme AM378_19455 b45a10435dca6610f80743a573aeabd1 322 Gene3D G3DSA:3.40.50.1100 51 147 5.6E-106 T 15-10-2018 AM378_19455 b45a10435dca6610f80743a573aeabd1 322 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 43 56 - T 15-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 AM378_19455 b45a10435dca6610f80743a573aeabd1 322 Gene3D G3DSA:3.40.50.1100 8 308 5.6E-106 T 15-10-2018 AM378_19455 b45a10435dca6610f80743a573aeabd1 322 SUPERFAMILY SSF53686 6 308 1.13E-90 T 15-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme AM378_12640 c56c4586dd686cefe8dac37dde182132 299 TIGRFAM TIGR01413 Dyp_perox_fam: Dyp-type peroxidase family 5 295 2.6E-86 T 15-10-2018 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 AM378_12640 c56c4586dd686cefe8dac37dde182132 299 Pfam PF04261 Dyp-type peroxidase family 5 294 3.1E-92 T 15-10-2018 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 AM378_12640 c56c4586dd686cefe8dac37dde182132 299 SUPERFAMILY SSF54909 1 297 7.69E-90 T 15-10-2018 IPR011008 Dimeric alpha-beta barrel AM378_02150 9c7f6c764f7e2326fa14b9772a81e7fb 483 Pfam PF03972 MmgE/PrpD family 18 464 3.3E-157 T 15-10-2018 IPR005656 MmgE/PrpD GO:0016829 AM378_02150 9c7f6c764f7e2326fa14b9772a81e7fb 483 SUPERFAMILY SSF103378 13 482 1.1E-154 T 15-10-2018 IPR036148 MmgE/PrpD superfamily GO:0016829 AM378_02150 9c7f6c764f7e2326fa14b9772a81e7fb 483 Gene3D G3DSA:1.10.4100.10 22 462 9.1E-204 T 15-10-2018 AM378_02150 9c7f6c764f7e2326fa14b9772a81e7fb 483 Gene3D G3DSA:3.30.1330.120 285 426 9.1E-204 T 15-10-2018 AM378_02150 9c7f6c764f7e2326fa14b9772a81e7fb 483 TIGRFAM TIGR02330 prpD: 2-methylcitrate dehydratase 13 483 7.3E-260 T 15-10-2018 IPR012705 2-methylcitrate dehydratase PrpD GO:0019629|GO:0047547|GO:0051537 KEGG: 00640+4.2.1.79 AM378_03145 86ad6202400c5312d4d8b54e8f7f2866 344 Pfam PF00589 Phage integrase family 265 320 3.7E-11 T 15-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AM378_03145 86ad6202400c5312d4d8b54e8f7f2866 344 Pfam PF00589 Phage integrase family 174 247 3.7E-8 T 15-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AM378_03145 86ad6202400c5312d4d8b54e8f7f2866 344 Gene3D G3DSA:1.10.443.10 169 337 1.3E-41 T 15-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 AM378_03145 86ad6202400c5312d4d8b54e8f7f2866 344 SUPERFAMILY SSF56349 61 327 4.41E-42 T 15-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AM378_17470 81b3e4e7a8b3dd19ddf810f3e1c03d72 101 Gene3D G3DSA:4.10.830.10 41 101 7.7E-21 T 15-10-2018 AM378_17470 81b3e4e7a8b3dd19ddf810f3e1c03d72 101 SUPERFAMILY SSF57716 2 101 3.64E-36 T 15-10-2018 AM378_17470 81b3e4e7a8b3dd19ddf810f3e1c03d72 101 ProSitePatterns PS00527 Ribosomal protein S14 signature. 63 85 - T 15-10-2018 IPR018271 Ribosomal protein S14, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM378_17470 81b3e4e7a8b3dd19ddf810f3e1c03d72 101 Pfam PF00253 Ribosomal protein S14p/S29e 47 100 3.8E-25 T 15-10-2018 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM378_17470 81b3e4e7a8b3dd19ddf810f3e1c03d72 101 Hamap MF_00537 30S ribosomal protein S14 [rpsN]. 1 101 25.446 T 15-10-2018 IPR023036 Ribosomal protein S14, bacterial/plastid AM378_17550 0b75d8b8281805a9782d752444921da0 64 Pfam PF04324 BFD-like [2Fe-2S] binding domain 2 50 5.0E-15 T 15-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain AM378_17550 0b75d8b8281805a9782d752444921da0 64 Gene3D G3DSA:1.10.10.1100 1 56 1.3E-20 T 15-10-2018 AM378_07030 4c71f37d7372d330ecabbd83cd0ae428 152 Pfam PF04073 Aminoacyl-tRNA editing domain 24 140 4.2E-26 T 15-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 AM378_07030 4c71f37d7372d330ecabbd83cd0ae428 152 SUPERFAMILY SSF55826 4 151 3.66E-38 T 15-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 AM378_07030 4c71f37d7372d330ecabbd83cd0ae428 152 Gene3D G3DSA:3.90.960.10 1 152 5.8E-44 T 15-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 AM378_00820 ba2269c47c4b8c0267fcab57827ca869 554 PIRSF PIRSF001589 363 507 1.3E-28 T 15-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 AM378_00820 ba2269c47c4b8c0267fcab57827ca869 554 PIRSF PIRSF001589 1 367 3.2E-113 T 15-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 AM378_00820 ba2269c47c4b8c0267fcab57827ca869 554 SUPERFAMILY SSF52402 210 479 7.64E-76 T 15-10-2018 AM378_00820 ba2269c47c4b8c0267fcab57827ca869 554 TIGRFAM TIGR01536 asn_synth_AEB: asparagine synthase (glutamine-hydrolyzing) 2 372 8.9E-125 T 15-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 AM378_00820 ba2269c47c4b8c0267fcab57827ca869 554 Pfam PF00733 Asparagine synthase 212 367 2.7E-59 T 15-10-2018 IPR001962 Asparagine synthase GO:0004066|GO:0006529 AM378_00820 ba2269c47c4b8c0267fcab57827ca869 554 Pfam PF13537 Glutamine amidotransferase domain 48 165 2.8E-42 T 15-10-2018 IPR017932 Glutamine amidotransferase type 2 domain AM378_00820 ba2269c47c4b8c0267fcab57827ca869 554 SUPERFAMILY SSF56235 1 196 3.43E-57 T 15-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AM378_00820 ba2269c47c4b8c0267fcab57827ca869 554 Gene3D G3DSA:3.60.20.10 2 193 1.1E-74 T 15-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AM378_00820 ba2269c47c4b8c0267fcab57827ca869 554 Gene3D G3DSA:3.40.50.620 194 514 2.1E-116 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM378_02550 6440d47af742ecb5616e536e3f4abe1d 318 SUPERFAMILY SSF56235 3 309 5.15E-97 T 15-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AM378_02550 6440d47af742ecb5616e536e3f4abe1d 318 Gene3D G3DSA:3.60.20.30 185 318 4.6E-52 T 15-10-2018 AM378_02550 6440d47af742ecb5616e536e3f4abe1d 318 Pfam PF01112 Asparaginase 4 317 3.2E-120 T 15-10-2018 IPR000246 Peptidase T2, asparaginase 2 GO:0016787 AM378_03460 949299f5556eea9344adf1735b4422a9 587 TIGRFAM TIGR00702 TIGR00702: YcaO-type kinase domain 11 404 1.4E-161 T 15-10-2018 IPR003776 YcaO-like domain AM378_03460 949299f5556eea9344adf1735b4422a9 587 Pfam PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding 59 391 1.3E-80 T 15-10-2018 IPR003776 YcaO-like domain AM378_04245 67cbe842c45cd750f0569d119e9d4887 184 Pfam PF01292 Prokaryotic cytochrome b561 10 180 3.0E-24 T 15-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 AM378_04245 67cbe842c45cd750f0569d119e9d4887 184 SUPERFAMILY SSF81342 5 179 4.47E-34 T 15-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 AM378_03020 6af02fbadf722e2348b90c359bfa08dc 178 Gene3D G3DSA:2.60.40.1090 44 177 3.0E-26 T 15-10-2018 IPR036937 Fimbrial-type adhesion domain superfamily GO:0007155|GO:0009289 AM378_03020 6af02fbadf722e2348b90c359bfa08dc 178 Pfam PF00419 Fimbrial protein 34 136 8.6E-6 T 15-10-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM378_03020 6af02fbadf722e2348b90c359bfa08dc 178 SUPERFAMILY SSF49401 32 177 3.43E-31 T 15-10-2018 IPR008966 Adhesion domain superfamily AM378_05805 14dbed535fb304d459b475cd3ffebe18 272 Pfam PF00877 NlpC/P60 family 154 264 3.4E-32 T 15-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain AM378_05805 14dbed535fb304d459b475cd3ffebe18 272 Gene3D G3DSA:3.90.1720.10 133 267 9.9E-41 T 15-10-2018 AM378_05805 14dbed535fb304d459b475cd3ffebe18 272 SUPERFAMILY SSF54001 135 266 4.76E-40 T 15-10-2018 IPR038765 Papain-like cysteine peptidase superfamily AM378_12415 a546929fdec05440ded5054a3e9a07ef 358 Pfam PF01266 FAD dependent oxidoreductase 11 304 6.7E-7 T 15-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 AM378_03665 0ab97a7fb5797c89c50e4b08bc1fffe8 438 Pfam PF04403 Paraquat-inducible protein A 267 425 6.9E-55 T 15-10-2018 IPR007498 Intermembrane transport protein PqiA-like AM378_03665 0ab97a7fb5797c89c50e4b08bc1fffe8 438 Pfam PF04403 Paraquat-inducible protein A 64 214 4.5E-40 T 15-10-2018 IPR007498 Intermembrane transport protein PqiA-like AM378_03665 0ab97a7fb5797c89c50e4b08bc1fffe8 438 TIGRFAM TIGR00155 pqiA_fam: integral membrane protein, PqiA family 19 424 1.9E-161 T 15-10-2018 IPR005219 Intermembrane transport protein PqiA-like, Enterobacteria-type AM378_06420 6a02f8a8b2c105c47f0eb82510f96548 217 Pfam PF01810 LysE type translocator 38 217 1.5E-13 T 15-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AM378_08190 65032361b808c3b224f4bb17e0cc216c 184 SUPERFAMILY SSF51182 52 168 1.31E-6 T 15-10-2018 IPR011051 RmlC-like cupin domain superfamily AM378_08190 65032361b808c3b224f4bb17e0cc216c 184 Gene3D G3DSA:2.60.120.10 5 182 4.4E-54 T 15-10-2018 IPR014710 RmlC-like jelly roll fold AM378_09520 d0217c3da64afed5f1ba087b0d700bec 220 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 12 109 5.3E-34 T 15-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 AM378_09520 d0217c3da64afed5f1ba087b0d700bec 220 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 33 214 1.2E-26 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AM378_09520 d0217c3da64afed5f1ba087b0d700bec 220 SUPERFAMILY SSF161098 13 206 1.7E-51 T 15-10-2018 IPR035906 MetI-like superfamily AM378_09520 d0217c3da64afed5f1ba087b0d700bec 220 Gene3D G3DSA:1.10.3720.10 5 219 1.1E-63 T 15-10-2018 IPR035906 MetI-like superfamily AM378_22350 09ff38b4597ee266abde46282184126e 227 Pfam PF10144 Bacterial virulence factor haemolysin 1 159 1.2E-67 T 15-10-2018 IPR019305 Uncharacterised protein family Smp AM378_20415 a0c63105a4b7e9ef86f3a2ff40ee09ac 275 Gene3D G3DSA:3.40.50.1820 33 272 8.5E-77 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold AM378_20415 a0c63105a4b7e9ef86f3a2ff40ee09ac 275 Pfam PF01738 Dienelactone hydrolase family 50 272 3.1E-74 T 15-10-2018 IPR002925 Dienelactone hydrolase GO:0016787 AM378_20415 a0c63105a4b7e9ef86f3a2ff40ee09ac 275 SUPERFAMILY SSF53474 40 272 1.1E-51 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold AM378_17670 da05dae4531693888a8eb2320d31b3da 200 Pfam PF01810 LysE type translocator 16 190 6.3E-18 T 15-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AM378_08660 71923e5a50cb22d3a0fbdd8cd2d752a4 314 Pfam PF01297 Zinc-uptake complex component A periplasmic 30 307 7.1E-56 T 15-10-2018 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 AM378_08660 71923e5a50cb22d3a0fbdd8cd2d752a4 314 Gene3D G3DSA:3.40.50.1980 29 202 1.3E-55 T 15-10-2018 AM378_08660 71923e5a50cb22d3a0fbdd8cd2d752a4 314 Gene3D G3DSA:3.40.50.1980 203 314 1.3E-41 T 15-10-2018 AM378_08660 71923e5a50cb22d3a0fbdd8cd2d752a4 314 SUPERFAMILY SSF53807 29 314 2.45E-76 T 15-10-2018 AM378_22615 9306aaedb066fa49690f420df89f58df 266 Pfam PF06738 Putative threonine/serine exporter 21 260 3.3E-67 T 15-10-2018 IPR010619 Putative threonine/serine exporter AM378_06705 0249ef458b425e7489bd152cdd324bd4 64 SUPERFAMILY SSF47598 2 46 1.82E-10 T 15-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 AM378_06705 0249ef458b425e7489bd152cdd324bd4 64 Gene3D G3DSA:1.10.1220.10 1 47 2.9E-6 T 15-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 AM378_02440 ecf1bcac0ccd7b53bc6a7259485991c3 180 Gene3D G3DSA:2.60.40.1090 23 180 4.4E-39 T 15-10-2018 IPR036937 Fimbrial-type adhesion domain superfamily GO:0007155|GO:0009289 AM378_02440 ecf1bcac0ccd7b53bc6a7259485991c3 180 Pfam PF00419 Fimbrial protein 28 180 6.8E-20 T 15-10-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM378_02440 ecf1bcac0ccd7b53bc6a7259485991c3 180 SUPERFAMILY SSF49401 33 180 2.63E-32 T 15-10-2018 IPR008966 Adhesion domain superfamily AM378_08820 9f159c515545658b82b2182644881bdf 107 Pfam PF07130 YebG protein 1 74 7.5E-35 T 15-10-2018 IPR009813 Uncharacterised protein family YebG AM378_08820 9f159c515545658b82b2182644881bdf 107 Gene3D G3DSA:1.10.10.710 21 79 1.9E-11 T 15-10-2018 IPR038627 YebG-like superfamily AM378_19215 059ef034163f684c8c4c5bb16cb1e076 322 Pfam PF02653 Branched-chain amino acid transport system / permease component 45 313 1.9E-52 T 15-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 AM378_19715 2ee78136eb31bae321ee127d9f379dfb 183 Pfam PF00857 Isochorismatase family 4 141 3.3E-21 T 15-10-2018 IPR000868 Isochorismatase-like GO:0003824 AM378_19715 2ee78136eb31bae321ee127d9f379dfb 183 SUPERFAMILY SSF52499 2 180 7.46E-34 T 15-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 AM378_19715 2ee78136eb31bae321ee127d9f379dfb 183 Gene3D G3DSA:3.40.50.850 1 182 4.9E-35 T 15-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 AM378_08450 ce604211b9092d0a9a32d9cde3106086 254 Pfam PF06629 MltA-interacting protein MipA 34 254 1.0E-54 T 15-10-2018 IPR010583 MltA-interacting MipA AM378_08120 b92ad7c79a935d29eb0c19b2296cc691 104 Pfam PF04972 BON domain 37 104 3.5E-20 T 15-10-2018 IPR007055 BON domain AM378_08120 b92ad7c79a935d29eb0c19b2296cc691 104 SMART SM00749 42 104 1.5E-7 T 15-10-2018 IPR014004 Transport-associated and nodulation domain, bacteria AM378_13210 10b52921c855f47250b7fc0a4afac12e 86 Pfam PF06643 Protein of unknown function (DUF1158) 8 79 9.0E-7 T 15-10-2018 IPR010590 Protein of unknown function DUF1158 AM378_01840 f47608834e9accf418a4f501d6954c42 175 SUPERFAMILY SSF52499 2 161 3.01E-42 T 15-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 AM378_01840 f47608834e9accf418a4f501d6954c42 175 Pfam PF00857 Isochorismatase family 3 139 8.4E-34 T 15-10-2018 IPR000868 Isochorismatase-like GO:0003824 AM378_01840 f47608834e9accf418a4f501d6954c42 175 Gene3D G3DSA:3.40.50.850 1 166 2.7E-40 T 15-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 AM378_16105 2062c73fc08946c7de5e85fe0639b029 161 Pfam PF06995 Phage P2 GpU 6 125 5.1E-47 T 15-10-2018 IPR009734 Myoviridae, GpU AM378_16105 2062c73fc08946c7de5e85fe0639b029 161 PIRSF PIRSF029208 1 151 8.4E-62 T 15-10-2018 IPR016912 Bacteriophage P2, GpU AM378_02015 db08f1cd03f6948bfc6b0b53170ba767 343 Pfam PF00487 Fatty acid desaturase 54 286 1.8E-31 T 15-10-2018 IPR005804 Fatty acid desaturase domain GO:0006629 AM378_06135 8b3f2caadfff2714b16e0c19f383a333 122 SUPERFAMILY SSF54593 8 119 2.89E-21 T 15-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AM378_06135 8b3f2caadfff2714b16e0c19f383a333 122 Gene3D G3DSA:3.30.720.110 66 121 7.0E-26 T 15-10-2018 AM378_06135 8b3f2caadfff2714b16e0c19f383a333 122 Gene3D G3DSA:3.30.720.120 1 54 5.5E-25 T 15-10-2018 AM378_06135 8b3f2caadfff2714b16e0c19f383a333 122 PIRSF PIRSF039020 1 122 1.3E-45 T 15-10-2018 IPR026275 Glyoxalase/dioxygenase/EhpR AM378_06135 8b3f2caadfff2714b16e0c19f383a333 122 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 8 115 1.9E-8 T 15-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AM378_11285 0e643caed60a8a57f4385e00ef07135a 331 Pfam PF02653 Branched-chain amino acid transport system / permease component 49 323 1.8E-38 T 15-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 AM378_12400 c0cb2837b39c4ce2e4f5263a3a7461ce 136 Pfam PF10697 Protein of unknown function (DUF2502) 28 114 1.6E-33 T 15-10-2018 IPR019638 Protein of unknown function DUF2502 AM378_09755 29e4108999ac25188f0a86e8ee495107 100 Gene3D G3DSA:1.10.260.40 4 98 1.6E-16 T 15-10-2018 AM378_09755 29e4108999ac25188f0a86e8ee495107 100 SUPERFAMILY SSF47413 44 93 1.2E-9 T 15-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AM378_09755 29e4108999ac25188f0a86e8ee495107 100 Pfam PF01381 Helix-turn-helix 45 88 4.8E-7 T 15-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM378_09060 080d7c93e8ca05773892a4246992fabd 50 Pfam PF10617 Protein of unknown function (DUF2474) 11 49 2.5E-22 T 15-10-2018 IPR018895 Protein of unknown function DUF2474 AM378_21185 230c6c371898da019cbeb9afae934ed4 212 Gene3D G3DSA:3.30.1060.10 5 211 2.1E-88 T 15-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 AM378_21185 230c6c371898da019cbeb9afae934ed4 212 SUPERFAMILY SSF55068 7 208 5.36E-83 T 15-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 AM378_21185 230c6c371898da019cbeb9afae934ed4 212 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 44 199 6.6E-70 T 15-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 AM378_21185 230c6c371898da019cbeb9afae934ed4 212 Pfam PF01625 Peptide methionine sulfoxide reductase 46 199 2.6E-67 T 15-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 AM378_21185 230c6c371898da019cbeb9afae934ed4 212 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 43 205 39.049 T 15-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 AM378_08460 f8ddefc23b8d0bcd9f25ee691db3ffe7 422 Pfam PF04285 Protein of unknown function (DUF444) 4 420 1.3E-186 T 15-10-2018 IPR006698 Uncharacterised protein family UPF0229 AM378_08460 f8ddefc23b8d0bcd9f25ee691db3ffe7 422 Hamap MF_01232 UPF0229 protein YeaH [yeaH]. 1 422 41.854 T 15-10-2018 IPR006698 Uncharacterised protein family UPF0229 AM378_18615 ec616a2bf12e4def1f98aab774cfae23 123 Pfam PF07226 Protein of unknown function (DUF1422) 3 114 6.4E-57 T 15-10-2018 IPR009867 Protein of unknown function DUF1422 AM378_18615 ec616a2bf12e4def1f98aab774cfae23 123 ProDom PD076479 MEMBRANE INNER YIJD TRANSMEMBRANE Y0323 AAA SIMILAR A ACETYL-COENZYME VV0128 2 114 3.0E-47 T 15-10-2018 IPR009867 Protein of unknown function DUF1422 AM378_11670 337c24edefffc0a3970c10d875ed91e0 179 Pfam PF07437 YfaZ precursor 1 179 2.7E-70 T 15-10-2018 IPR009998 YfaZ AM378_11670 337c24edefffc0a3970c10d875ed91e0 179 SUPERFAMILY SSF56925 31 179 1.33E-5 T 15-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel AM378_20725 0ccc7c635686e8507c51815bd71ea3e7 223 Pfam PF07356 Protein of unknown function (DUF1481) 34 219 5.6E-74 T 15-10-2018 IPR010858 Protein of unknown function DUF1481 AM378_00960 10d47584992f65b72b3d5fadef1c3ac7 326 PIRSF PIRSF000962 4 326 3.1E-101 T 15-10-2018 IPR000396 Cyclic-AMP phosphodiesterase, class-II GO:0004115|GO:0006198 AM378_00960 10d47584992f65b72b3d5fadef1c3ac7 326 Pfam PF02112 cAMP phosphodiesterases class-II 23 321 1.1E-46 T 15-10-2018 IPR000396 Cyclic-AMP phosphodiesterase, class-II GO:0004115|GO:0006198 AM378_00960 10d47584992f65b72b3d5fadef1c3ac7 326 SUPERFAMILY SSF56281 24 306 1.96E-21 T 15-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AM378_00960 10d47584992f65b72b3d5fadef1c3ac7 326 Gene3D G3DSA:3.60.15.10 28 315 1.5E-16 T 15-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AM378_00960 10d47584992f65b72b3d5fadef1c3ac7 326 PRINTS PR00388 3'5'-cyclic nucleotide class II phosphodiesterase signature 123 144 2.5E-28 T 15-10-2018 IPR000396 Cyclic-AMP phosphodiesterase, class-II GO:0004115|GO:0006198 AM378_00960 10d47584992f65b72b3d5fadef1c3ac7 326 PRINTS PR00388 3'5'-cyclic nucleotide class II phosphodiesterase signature 96 114 2.5E-28 T 15-10-2018 IPR000396 Cyclic-AMP phosphodiesterase, class-II GO:0004115|GO:0006198 AM378_00960 10d47584992f65b72b3d5fadef1c3ac7 326 PRINTS PR00388 3'5'-cyclic nucleotide class II phosphodiesterase signature 277 288 2.5E-28 T 15-10-2018 IPR000396 Cyclic-AMP phosphodiesterase, class-II GO:0004115|GO:0006198 AM378_00960 10d47584992f65b72b3d5fadef1c3ac7 326 PRINTS PR00388 3'5'-cyclic nucleotide class II phosphodiesterase signature 232 243 2.5E-28 T 15-10-2018 IPR000396 Cyclic-AMP phosphodiesterase, class-II GO:0004115|GO:0006198 AM378_00960 10d47584992f65b72b3d5fadef1c3ac7 326 PRINTS PR00388 3'5'-cyclic nucleotide class II phosphodiesterase signature 251 264 2.5E-28 T 15-10-2018 IPR000396 Cyclic-AMP phosphodiesterase, class-II GO:0004115|GO:0006198 AM378_00960 10d47584992f65b72b3d5fadef1c3ac7 326 ProSitePatterns PS00607 cAMP phosphodiesterases class-II signature. 100 114 - T 15-10-2018 IPR024225 Cyclic-AMP phosphodiesterase class-II, conserved site GO:0008081 AM378_20430 bdc27e38173a6dc8c7ab3708b64fb791 176 Pfam PF09335 SNARE associated Golgi protein 41 164 7.9E-14 T 15-10-2018 IPR032816 SNARE associated Golgi protein AM378_16220 77143be38f0edd09121500493a019f4f 271 Pfam PF05929 Phage capsid scaffolding protein (GPO) serine peptidase 6 271 2.2E-91 T 15-10-2018 IPR009228 Capsid scaffolding protein GpO GO:0019069 AM378_17100 bca63fd843dcbc5b76d7f08e07deaaf5 445 TIGRFAM TIGR00797 matE: MATE efflux family protein 21 414 6.2E-98 T 15-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AM378_17100 bca63fd843dcbc5b76d7f08e07deaaf5 445 Pfam PF01554 MatE 21 181 3.4E-34 T 15-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AM378_17100 bca63fd843dcbc5b76d7f08e07deaaf5 445 Pfam PF01554 MatE 245 398 9.0E-14 T 15-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AM378_02630 5aba1cbd4d1cd1a99b7f1e7cf666e5fb 336 Pfam PF02653 Branched-chain amino acid transport system / permease component 41 325 7.0E-50 T 15-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 AM378_01490 ef177604720cdd958e039e30415c1d21 187 Pfam PF09335 SNARE associated Golgi protein 24 144 4.9E-17 T 15-10-2018 IPR032816 SNARE associated Golgi protein AM378_05045 26ca41ee5061cb8099e385ff6c45337d 75 Gene3D G3DSA:2.30.30.100 20 75 3.6E-19 T 15-10-2018 AM378_05045 26ca41ee5061cb8099e385ff6c45337d 75 Pfam PF06004 Bacterial protein of unknown function (DUF903) 26 72 9.4E-17 T 15-10-2018 IPR010305 Protein of unknown function DUF903 AM378_05045 26ca41ee5061cb8099e385ff6c45337d 75 SUPERFAMILY SSF50182 24 73 2.51E-11 T 15-10-2018 IPR010920 LSM domain superfamily AM378_14770 505e105298243222437af0a279bc1b67 143 Gene3D G3DSA:3.10.180.10 23 142 4.2E-39 T 15-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AM378_14770 505e105298243222437af0a279bc1b67 143 SUPERFAMILY SSF54593 34 141 1.61E-13 T 15-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AM378_05820 75e06a160a297e8f24ba6e08d96e8991 135 ProSitePatterns PS00934 Glyoxalase I signature 1. 5 26 - T 15-10-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 AM378_05820 75e06a160a297e8f24ba6e08d96e8991 135 TIGRFAM TIGR00068 glyox_I: lactoylglutathione lyase 2 134 3.1E-67 T 15-10-2018 IPR004361 Glyoxalase I GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 AM378_05820 75e06a160a297e8f24ba6e08d96e8991 135 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 3 123 4.2E-26 T 15-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AM378_05820 75e06a160a297e8f24ba6e08d96e8991 135 Gene3D G3DSA:3.10.180.10 1 132 9.0E-49 T 15-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AM378_05820 75e06a160a297e8f24ba6e08d96e8991 135 SUPERFAMILY SSF54593 1 128 1.21E-35 T 15-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AM378_11855 f2de4c26dfc498f2f847a7e9b1a9d79f 130 Pfam PF15607 Bacterial toxin 44 39 126 8.9E-18 T 15-10-2018 IPR028946 Bacterial toxin 44 AM378_10680 17fee47fa82af6a94926847769e300a0 132 Gene3D G3DSA:2.60.120.10 6 108 2.0E-13 T 15-10-2018 IPR014710 RmlC-like jelly roll fold AM378_10680 17fee47fa82af6a94926847769e300a0 132 SUPERFAMILY SSF51182 8 114 1.24E-14 T 15-10-2018 IPR011051 RmlC-like cupin domain superfamily AM378_10680 17fee47fa82af6a94926847769e300a0 132 Pfam PF07883 Cupin domain 44 105 1.8E-10 T 15-10-2018 IPR013096 Cupin 2, conserved barrel AM378_15665 a8f6a38954fef6949c8f66b289b03a78 179 Pfam PF00196 Bacterial regulatory proteins, luxR family 119 165 2.2E-9 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM378_15665 a8f6a38954fef6949c8f66b289b03a78 179 SMART SM00421 117 174 3.1E-8 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM378_15665 a8f6a38954fef6949c8f66b289b03a78 179 Gene3D G3DSA:1.10.10.10 89 178 1.1E-12 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_15665 a8f6a38954fef6949c8f66b289b03a78 179 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 134 150 6.7E-9 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM378_15665 a8f6a38954fef6949c8f66b289b03a78 179 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 150 162 6.7E-9 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM378_15665 a8f6a38954fef6949c8f66b289b03a78 179 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 120 134 6.7E-9 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM378_15665 a8f6a38954fef6949c8f66b289b03a78 179 SUPERFAMILY SSF46894 115 176 1.22E-12 T 15-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AM378_14765 2cfe657234183e230998c04a20abb085 405 Gene3D G3DSA:1.20.1250.20 1 185 5.5E-33 T 15-10-2018 AM378_14765 2cfe657234183e230998c04a20abb085 405 Gene3D G3DSA:1.20.1250.20 198 388 3.0E-27 T 15-10-2018 AM378_14765 2cfe657234183e230998c04a20abb085 405 SUPERFAMILY SSF103473 2 385 1.57E-67 T 15-10-2018 IPR036259 MFS transporter superfamily AM378_14765 2cfe657234183e230998c04a20abb085 405 Pfam PF07690 Major Facilitator Superfamily 5 351 2.6E-43 T 15-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM378_16995 3ce6ffc630d53e65f920b37ae491ff7d 147 Pfam PF13924 Lipocalin-like domain 7 142 8.7E-44 T 15-10-2018 IPR024311 Lipocalin-like domain AM378_09565 9be22352d13f340bd0988741a02816ad 122 Gene3D G3DSA:1.20.58.380 2 111 5.9E-34 T 15-10-2018 AM378_09565 9be22352d13f340bd0988741a02816ad 122 Hamap MF_01180 Flagellar protein FliT [fliT]. 1 120 26.269 T 15-10-2018 IPR008622 Flagellar protein FliT AM378_09565 9be22352d13f340bd0988741a02816ad 122 Pfam PF05400 Flagellar protein FliT 21 106 4.8E-22 T 15-10-2018 IPR008622 Flagellar protein FliT AM378_07550 9f6c84b567f3b2362ee607e862d2115e 463 Gene3D G3DSA:1.20.1740.10 1 448 1.0E-59 T 15-10-2018 AM378_07550 9f6c84b567f3b2362ee607e862d2115e 463 PIRSF PIRSF006060 1 455 1.7E-50 T 15-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 AM378_07550 9f6c84b567f3b2362ee607e862d2115e 463 TIGRFAM TIGR00905 2A0302: transporter, basic amino acid/polyamine antiporter (APA) family 3 462 1.3E-170 T 15-10-2018 IPR004754 Amino acid antiporter GO:0006865|GO:0016021 AM378_07550 9f6c84b567f3b2362ee607e862d2115e 463 Pfam PF13520 Amino acid permease 5 408 8.6E-73 T 15-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 AM378_00635 d76506472614478f2b9064db8c5cf5a9 127 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 5 122 19.662 T 15-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 AM378_00635 d76506472614478f2b9064db8c5cf5a9 127 TIGRFAM TIGR00494 crcB: protein CrcB 6 120 4.5E-40 T 15-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 AM378_00635 d76506472614478f2b9064db8c5cf5a9 127 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 6 116 1.2E-24 T 15-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 AM378_19450 b616728d1f82c8fe4038e6cdf5582c4e 313 Pfam PF02423 Ornithine cyclodeaminase/mu-crystallin family 6 309 9.8E-62 T 15-10-2018 IPR003462 Ornithine cyclodeaminase/mu-crystallin Reactome: R-HSA-71064 AM378_19450 b616728d1f82c8fe4038e6cdf5582c4e 313 Gene3D G3DSA:3.30.1780.10 4 310 4.2E-76 T 15-10-2018 IPR023401 Ornithine cyclodeaminase, N-terminal Reactome: R-HSA-71064 AM378_19450 b616728d1f82c8fe4038e6cdf5582c4e 313 PIRSF PIRSF001439 1 313 1.5E-56 T 15-10-2018 IPR003462 Ornithine cyclodeaminase/mu-crystallin Reactome: R-HSA-71064 AM378_19450 b616728d1f82c8fe4038e6cdf5582c4e 313 Gene3D G3DSA:3.40.50.720 125 297 4.2E-76 T 15-10-2018 AM378_19450 b616728d1f82c8fe4038e6cdf5582c4e 313 SUPERFAMILY SSF51735 1 311 3.62E-75 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily AM378_11865 4337f266d0474608ac413ce0d05c55d8 283 SUPERFAMILY SSF52518 7 274 1.42E-80 T 15-10-2018 IPR029061 Thiamin diphosphate-binding fold AM378_11865 4337f266d0474608ac413ce0d05c55d8 283 Gene3D G3DSA:3.40.50.970 3 282 1.2E-89 T 15-10-2018 AM378_11865 4337f266d0474608ac413ce0d05c55d8 283 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 16 266 4.0E-48 T 15-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 AM378_17185 dae048b68a4848558e8adb4354a7772c 477 Gene3D G3DSA:2.40.160.130 23 477 9.0E-176 T 15-10-2018 IPR038636 Capsule assembly protein Wzi superfamily AM378_17185 dae048b68a4848558e8adb4354a7772c 477 Pfam PF14052 Capsule assembly protein Wzi 88 464 2.8E-114 T 15-10-2018 IPR026950 Capsule assembly protein Wzi AM378_15525 3020851208862fe3f7fc60e33ed11801 929 Gene3D G3DSA:3.30.365.10 28 613 6.9E-65 T 15-10-2018 AM378_15525 3020851208862fe3f7fc60e33ed11801 929 SUPERFAMILY SSF54665 54 175 1.24E-11 T 15-10-2018 IPR036856 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead superfamily AM378_15525 3020851208862fe3f7fc60e33ed11801 929 SUPERFAMILY SSF56003 263 928 1.96E-115 T 15-10-2018 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily GO:0016491|GO:0055114 AM378_15525 3020851208862fe3f7fc60e33ed11801 929 Gene3D G3DSA:3.30.365.10 759 929 1.5E-36 T 15-10-2018 AM378_15525 3020851208862fe3f7fc60e33ed11801 929 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 636 868 1.8E-19 T 15-10-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 AM378_15525 3020851208862fe3f7fc60e33ed11801 929 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 264 607 4.4E-55 T 15-10-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 AM378_18300 68f90a80a5b06b43a0b13f03db32e983 111 Pfam PF10625 Universal stress protein B (UspB) 1 107 2.4E-54 T 15-10-2018 IPR019598 Universal stress protein B AM378_18300 68f90a80a5b06b43a0b13f03db32e983 111 Hamap MF_01088 Universal stress protein B [uspB]. 1 107 36.694 T 15-10-2018 IPR019598 Universal stress protein B AM378_12545 7c5ac76a0601fbc2eb0d1bcef27d421d 182 Pfam PF06042 Nucleotidyltransferase 23 178 9.6E-58 T 15-10-2018 IPR009267 Putative nucleotidyltransferase AM378_22245 d2018f4b0692527b6de8ac480890924d 94 ProDom PD058594 MEMBRANE INNER C5447 MAJOR ECS5328 THE SUPERFAMILY PERMEASES STY4905 YJJZ 22 92 2.0E-12 T 15-10-2018 IPR009885 Protein of unknown function DUF1435 AM378_22245 d2018f4b0692527b6de8ac480890924d 94 Pfam PF07256 Protein of unknown function (DUF1435) 17 91 3.8E-35 T 15-10-2018 IPR009885 Protein of unknown function DUF1435 AM378_02635 496f72ad4d67c608b499d17fe21a5e60 247 Pfam PF02698 DUF218 domain 48 170 2.0E-18 T 15-10-2018 IPR003848 Domain of unknown function DUF218 AM378_02635 496f72ad4d67c608b499d17fe21a5e60 247 PIRSF PIRSF005011 1 247 5.5E-155 T 15-10-2018 IPR023604 Uncharacterised protein family SanA AM378_01720 cafb4d90600eed079e81cb08501c8204 394 Gene3D G3DSA:1.20.1250.20 10 381 7.1E-39 T 15-10-2018 AM378_01720 cafb4d90600eed079e81cb08501c8204 394 SUPERFAMILY SSF103473 7 384 1.57E-48 T 15-10-2018 IPR036259 MFS transporter superfamily AM378_01720 cafb4d90600eed079e81cb08501c8204 394 Pfam PF07690 Major Facilitator Superfamily 22 353 7.0E-29 T 15-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM378_14980 4e6f9e60bb02c7d7d465641d057721ab 237 Pfam PF11010 Protein of unknown function (DUF2848) 26 228 1.3E-82 T 15-10-2018 IPR021269 Protein of unknown function DUF2848 AM378_10535 a3209cbfdcdd37b1dfd4d42e0e449286 132 Gene3D G3DSA:1.20.58.1630 30 127 6.1E-24 T 15-10-2018 IPR038432 PulS/OutS-like superfamily AM378_10535 a3209cbfdcdd37b1dfd4d42e0e449286 132 Pfam PF09691 Type II secretion system pilotin lipoprotein (PulS_OutS) 18 120 5.3E-31 T 15-10-2018 IPR019114 Chaperone lipoprotein, PulS/OutS-like AM378_11730 7a4a20ceaf6a23ebeab9f83b77ee7050 411 Pfam PF07690 Major Facilitator Superfamily 26 366 1.4E-19 T 15-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM378_11730 7a4a20ceaf6a23ebeab9f83b77ee7050 411 SUPERFAMILY SSF103473 15 406 2.09E-34 T 15-10-2018 IPR036259 MFS transporter superfamily AM378_11730 7a4a20ceaf6a23ebeab9f83b77ee7050 411 Gene3D G3DSA:1.20.1250.20 231 411 3.4E-10 T 15-10-2018 AM378_11730 7a4a20ceaf6a23ebeab9f83b77ee7050 411 Gene3D G3DSA:1.20.1250.20 19 201 1.2E-17 T 15-10-2018 AM378_17635 adc732cbae5fc826cedbfe3498eb1f1a 184 Pfam PF02525 Flavodoxin-like fold 7 173 1.0E-41 T 15-10-2018 IPR003680 Flavodoxin-like fold AM378_17635 adc732cbae5fc826cedbfe3498eb1f1a 184 SUPERFAMILY SSF52218 6 176 1.51E-48 T 15-10-2018 IPR029039 Flavoprotein-like superfamily AM378_17635 adc732cbae5fc826cedbfe3498eb1f1a 184 Gene3D G3DSA:3.40.50.360 7 178 3.7E-51 T 15-10-2018 IPR029039 Flavoprotein-like superfamily AM378_17635 adc732cbae5fc826cedbfe3498eb1f1a 184 Hamap MF_01415 Glutathione-regulated potassium-efflux system ancillary protein KefG [kefG]. 2 183 50.309 T 15-10-2018 IPR023947 Glutathione-regulated potassium-efflux system ancillary protein KefG GO:0006813 KEGG: 00130+1.6.5.2|MetaCyc: PWY-7731 AM378_07935 c6804493d54571734da548fedd84b107 72 Pfam PF05433 Glycine zipper 2TM domain 34 71 3.6E-7 T 15-10-2018 IPR008816 Glycine zipper 2TM domain GO:0019867 AM378_16020 566835b443fe2d3cae744b03ecab4608 91 Pfam PF04380 Membrane fusogenic activity 1 77 1.3E-29 T 15-10-2018 IPR007475 Membrane fusogenic activity AM378_20290 68f826d414a3c7a3ab88e796d54b1f06 90 Pfam PF06611 Protein of unknown function (DUF1145) 1 58 2.4E-28 T 15-10-2018 IPR009525 Protein of unknown function DUF1145 AM378_21430 f2067d48d5d551a7355781cc985be894 292 Pfam PF01136 Peptidase family U32 94 237 1.2E-12 T 15-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 AM378_14400 df25deaed5032e8a15225f35be4e7b19 131 Pfam PF04241 Protein of unknown function (DUF423) 20 106 2.4E-24 T 15-10-2018 IPR006696 Protein of unknown function DUF423 AM378_05310 c3f703cad89421112095a841c8ee26b3 152 Pfam PF05229 Spore Coat Protein U domain 8 149 2.4E-36 T 15-10-2018 IPR007893 Spore coat protein U AM378_05310 c3f703cad89421112095a841c8ee26b3 152 SMART SM00972 94 149 1.0E-21 T 15-10-2018 IPR007893 Spore coat protein U AM378_20885 4102737f02b580ab14ac542f120e6127 107 SUPERFAMILY SSF54913 5 106 2.48E-33 T 15-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta AM378_20885 4102737f02b580ab14ac542f120e6127 107 Gene3D G3DSA:3.30.70.120 1 107 2.4E-37 T 15-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal AM378_20885 4102737f02b580ab14ac542f120e6127 107 Pfam PF03091 CutA1 divalent ion tolerance protein 7 104 9.1E-32 T 15-10-2018 IPR004323 Divalent ion tolerance protein, CutA GO:0010038 AM378_20885 4102737f02b580ab14ac542f120e6127 107 Hamap MF_01160 Divalent-cation tolerance protein CutA [cutA]. 1 107 36.064 T 15-10-2018 IPR023700 Divalent cation tolerance protein CutA, Enterobacteria GO:0005507|GO:0005737 AM378_08380 79c6a158f1adb5134a85ffa7fea50e0d 98 Pfam PF07383 Protein of unknown function (DUF1496) 37 97 5.6E-25 T 15-10-2018 IPR009971 Protein of unknown function DUF1496 AM378_02115 65f9902a9c11c5536cb0cde79b392046 130 Gene3D G3DSA:3.30.429.10 1 129 4.1E-43 T 15-10-2018 IPR014347 Tautomerase/MIF superfamily AM378_02115 65f9902a9c11c5536cb0cde79b392046 130 SUPERFAMILY SSF55331 2 127 1.96E-35 T 15-10-2018 IPR014347 Tautomerase/MIF superfamily AM378_02115 65f9902a9c11c5536cb0cde79b392046 130 Pfam PF14552 Tautomerase enzyme 38 119 4.2E-27 T 15-10-2018 IPR037479 Tautomerase, MSAD family AM378_11220 c88976bbe5d62c7eb8fe204176abacb8 105 Hamap MF_00683 UPF0265 protein YeeX [yeeX]. 9 103 25.908 T 15-10-2018 IPR007458 Protein of unknown function DUF496 AM378_11220 c88976bbe5d62c7eb8fe204176abacb8 105 ProDom PD030876 UPF0265 YEEX HELIX ALPHA BFL460 UNCHARACTERIZED FN0411 HI1168 VPA1226 BCR 12 99 2.0E-41 T 15-10-2018 IPR007458 Protein of unknown function DUF496 AM378_11220 c88976bbe5d62c7eb8fe204176abacb8 105 PIRSF PIRSF028773 1 105 3.3E-51 T 15-10-2018 IPR007458 Protein of unknown function DUF496 AM378_11220 c88976bbe5d62c7eb8fe204176abacb8 105 Pfam PF04363 Protein of unknown function (DUF496) 9 100 5.7E-47 T 15-10-2018 IPR007458 Protein of unknown function DUF496 AM378_09895 7ad7119e55d643f861d016d9e7330d6a 130 Pfam PF13665 Domain of unknown function (DUF4150) 10 115 1.2E-39 T 15-10-2018 IPR025425 Domain of unknown function DUF4150 AM378_16845 6ec92c3c399433a0c8c3737b5c2cbb92 1267 Pfam PF13502 AsmA-like C-terminal region 1010 1253 3.0E-63 T 15-10-2018 IPR032712 AsmA-like, C-terminal AM378_16845 6ec92c3c399433a0c8c3737b5c2cbb92 1267 TIGRFAM TIGR02099 TIGR02099: TIGR02099 family protein 2 1263 0.0 T 15-10-2018 IPR011836 Conserved hypothetical protein CHP02099 AM378_16845 6ec92c3c399433a0c8c3737b5c2cbb92 1267 Pfam PF13116 Protein of unknown function 503 785 1.7E-100 T 15-10-2018 IPR025263 Domain of unknown function DUF3971 AM378_12200 ebecdf9b31e19bf9fa6aa956b288b4f0 78 Pfam PF04995 Heme exporter protein D (CcmD) 15 58 1.8E-18 T 15-10-2018 IPR007078 Haem exporter protein D (CcmD) GO:0015886|GO:0016021|GO:0017004 AM378_12200 ebecdf9b31e19bf9fa6aa956b288b4f0 78 TIGRFAM TIGR03141 cytochro_ccmD: heme exporter protein CcmD 12 57 4.4E-20 T 15-10-2018 IPR007078 Haem exporter protein D (CcmD) GO:0015886|GO:0016021|GO:0017004 AM378_10650 b2643d308c5a5aee5d162888c08af034 340 Gene3D G3DSA:3.20.20.30 11 320 2.8E-43 T 15-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 AM378_10650 b2643d308c5a5aee5d162888c08af034 340 Pfam PF00296 Luciferase-like monooxygenase 8 250 1.6E-24 T 15-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 AM378_10650 b2643d308c5a5aee5d162888c08af034 340 SUPERFAMILY SSF51679 7 333 9.81E-55 T 15-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 AM378_18760 70d192fce152ae243fdff28b2ff28eea 394 SUPERFAMILY SSF103473 7 389 2.88E-56 T 15-10-2018 IPR036259 MFS transporter superfamily AM378_18760 70d192fce152ae243fdff28b2ff28eea 394 Gene3D G3DSA:1.20.1720.10 9 383 8.8E-120 T 15-10-2018 AM378_18760 70d192fce152ae243fdff28b2ff28eea 394 Pfam PF07690 Major Facilitator Superfamily 14 350 1.2E-35 T 15-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM378_15595 7af755cd1c797ee0134f919ff0e74576 184 Pfam PF02325 YGGT family 10 76 4.6E-21 T 15-10-2018 IPR003425 CCB3/YggT GO:0016020 AM378_15595 7af755cd1c797ee0134f919ff0e74576 184 Pfam PF02325 YGGT family 108 171 9.7E-19 T 15-10-2018 IPR003425 CCB3/YggT GO:0016020 AM378_16575 e1773b562c10c441969cd17318533855 133 Pfam PF06295 Protein of unknown function (DUF1043) 6 126 2.1E-49 T 15-10-2018 IPR009386 Protein of unknown function DUF1043 AM378_16575 e1773b562c10c441969cd17318533855 133 PIRSF PIRSF006318 1 133 1.5E-52 T 15-10-2018 IPR009386 Protein of unknown function DUF1043 AM378_16605 b2e049140e0d412f858e15fc43094382 209 PIRSF PIRSF004649 1 209 1.1E-61 T 15-10-2018 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC AM378_16605 b2e049140e0d412f858e15fc43094382 209 Gene3D G3DSA:3.10.450.710 21 202 4.0E-43 T 15-10-2018 AM378_16605 b2e049140e0d412f858e15fc43094382 209 Pfam PF05494 MlaC protein 30 196 4.1E-54 T 15-10-2018 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC AM378_08075 d13c8edb359640bc4db0031ad4d4ce93 119 Gene3D G3DSA:1.10.890.40 41 119 1.8E-5 T 15-10-2018 AM378_19500 c48acb292e0863dc25abab3515b8906b 416 Pfam PF00155 Aminotransferase class I and II 66 402 4.2E-22 T 15-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AM378_19500 c48acb292e0863dc25abab3515b8906b 416 Gene3D G3DSA:3.40.640.10 1 415 1.9E-148 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AM378_19500 c48acb292e0863dc25abab3515b8906b 416 SUPERFAMILY SSF53383 24 411 1.35E-62 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM378_01470 0e3d1b70f6c434ffa29a4006552330aa 259 SUPERFAMILY SSF51197 25 242 1.74E-9 T 15-10-2018 AM378_01470 0e3d1b70f6c434ffa29a4006552330aa 259 Gene3D G3DSA:2.60.120.620 21 244 1.7E-8 T 15-10-2018 AM378_01470 0e3d1b70f6c434ffa29a4006552330aa 259 Pfam PF13640 2OG-Fe(II) oxygenase superfamily 140 236 1.8E-6 T 15-10-2018 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 AM378_02610 51d91f932a251403de79f4470afa9e32 390 Pfam PF04235 Protein of unknown function (DUF418) 220 378 6.6E-46 T 15-10-2018 IPR007349 Domain of unknown function DUF418 AM378_01385 e930c53d6e50d3db0c132e2b4250ead1 384 Pfam PF12698 ABC-2 family transporter protein 37 376 2.1E-40 T 15-10-2018 AM378_19375 8f6d719e7162eaf0ce59d14958d23916 445 Pfam PF00860 Permease family 31 404 2.9E-40 T 15-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 AM378_19375 8f6d719e7162eaf0ce59d14958d23916 445 PIRSF PIRSF005353 7 444 7.6E-173 T 15-10-2018 IPR026033 Purine permease PbuG-like AM378_16710 e779684c8b1b52eba64af16aa8e4c170 258 TIGRFAM TIGR03580 EF_0832: conserved hypothetical protein EF_0832/AHA_3913 2 258 4.7E-151 T 15-10-2018 IPR020042 Protein of unknown function DUF4311 AM378_16710 e779684c8b1b52eba64af16aa8e4c170 258 Pfam PF14188 Domain of unknown function (DUF4311) 25 237 1.4E-121 T 15-10-2018 IPR020042 Protein of unknown function DUF4311 AM378_09260 9e84ded2c26a6b54efae13be54def0f6 75 Pfam PF06150 ChaB 9 75 2.3E-26 T 15-10-2018 IPR009317 ChaB AM378_09260 9e84ded2c26a6b54efae13be54def0f6 75 Gene3D G3DSA:1.10.1740.70 2 75 1.2E-33 T 15-10-2018 AM378_09260 9e84ded2c26a6b54efae13be54def0f6 75 SUPERFAMILY SSF140376 2 75 3.79E-28 T 15-10-2018 IPR037205 ChaB superfamily AM378_24095 de5d0e19bc101bf14bc4e401f5d9d4ad 309 Pfam PF06675 Protein of unknown function (DUF1177) 40 308 6.2E-137 T 15-10-2018 IPR009561 Protein of unknown function DUF1177 AM378_08980 a3cd5d44da3a24a13038b8734a67328c 117 Pfam PF06993 Protein of unknown function (DUF1304) 11 113 3.0E-39 T 15-10-2018 IPR009732 Protein of unknown function DUF1304 AM378_12280 4cb8b3454c81f7d91d99e0a28d74e472 383 Gene3D G3DSA:2.40.160.10 44 383 6.6E-29 T 15-10-2018 IPR023614 Porin domain superfamily AM378_12280 4cb8b3454c81f7d91d99e0a28d74e472 383 SUPERFAMILY SSF56935 46 383 2.33E-28 T 15-10-2018 AM378_12280 4cb8b3454c81f7d91d99e0a28d74e472 383 Pfam PF03797 Autotransporter beta-domain 217 317 1.7E-6 T 15-10-2018 IPR005546 Autotransporter beta-domain AM378_08950 aad857dd14c828fd37ceff31b580fd8e 91 Pfam PF13974 YebO-like protein 16 91 2.2E-26 T 15-10-2018 IPR025594 YebO-like protein AM378_06510 378d70531c6c8e93906feab6414c89c2 188 Pfam PF02417 Chromate transporter 19 175 2.1E-29 T 15-10-2018 IPR003370 Chromate transporter GO:0015109|GO:0015703 AM378_01340 4cc19831ff1dad8b2a839f0085b09065 88 Gene3D G3DSA:1.10.720.30 14 73 2.7E-31 T 15-10-2018 IPR036361 SAP domain superfamily AM378_01340 4cc19831ff1dad8b2a839f0085b09065 88 Pfam PF09905 DNA-binding protein VF530 7 68 8.8E-35 T 15-10-2018 IPR018668 DNA-binding protein VF530-like GO:0003677 AM378_12075 d5d649373393ebf1dceb8806058740aa 298 Gene3D G3DSA:3.60.10.10 57 298 1.8E-47 T 15-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily AM378_12075 d5d649373393ebf1dceb8806058740aa 298 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 61 268 7.5E-9 T 15-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase AM378_12075 d5d649373393ebf1dceb8806058740aa 298 SUPERFAMILY SSF56219 49 296 1.44E-33 T 15-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily AM378_06920 81288490f3bd2ecba5e1bd8b9995346f 135 SUPERFAMILY SSF102462 1 134 1.41E-45 T 15-10-2018 IPR023476 Peptidyl-tRNA hydrolase II domain superfamily MetaCyc: PWY-6308 AM378_06920 81288490f3bd2ecba5e1bd8b9995346f 135 Pfam PF09391 Protein of unknown function (DUF2000) 4 134 4.5E-44 T 15-10-2018 IPR018988 Protein of unknown function DUF2000 AM378_06920 81288490f3bd2ecba5e1bd8b9995346f 135 Gene3D G3DSA:3.40.1490.10 1 135 8.4E-51 T 15-10-2018 IPR023476 Peptidyl-tRNA hydrolase II domain superfamily MetaCyc: PWY-6308 AM378_07040 c3ebe30faefc4e7595dd394ab1b75e76 433 Gene3D G3DSA:2.120.10.30 63 403 7.0E-20 T 15-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like AM378_07040 c3ebe30faefc4e7595dd394ab1b75e76 433 SUPERFAMILY SSF50952 63 431 1.96E-33 T 15-10-2018 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 AM378_07040 c3ebe30faefc4e7595dd394ab1b75e76 433 Pfam PF07995 Glucose / Sorbosone dehydrogenase 179 358 1.3E-14 T 15-10-2018 IPR012938 Glucose/Sorbosone dehydrogenase AM378_08215 d84ce9862b58325465ee66bfabdf9348 345 Pfam PF02653 Branched-chain amino acid transport system / permease component 62 334 1.0E-52 T 15-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 AM378_23660 5594b22e59b695cbc8ef093221425b3b 87 Pfam PF05930 Prophage CP4-57 regulatory protein (AlpA) 24 74 3.3E-22 T 15-10-2018 IPR010260 DNA-binding transcriptional activator AlpA AM378_09380 c3ff6cee7320754ddf63d8a9d6227dda 169 Gene3D G3DSA:1.10.530.40 27 168 1.6E-47 T 15-10-2018 AM378_09380 c3ff6cee7320754ddf63d8a9d6227dda 169 Pfam PF00959 Phage lysozyme 53 159 7.6E-18 T 15-10-2018 IPR002196 Glycoside hydrolase, family 24 GO:0003796|GO:0009253|GO:0016998 AM378_09380 c3ff6cee7320754ddf63d8a9d6227dda 169 SUPERFAMILY SSF53955 10 167 3.27E-55 T 15-10-2018 IPR023346 Lysozyme-like domain superfamily AM378_13890 b9752b0c6a0df82e60ec0b7db18f0765 137 Pfam PF07681 DoxX 10 90 1.6E-16 T 15-10-2018 IPR032808 DoxX family AM378_20930 497b55ac0f9f49ca0fdcf244b47e868a 43 Pfam PF08085 Entericidin EcnA/B family 22 42 2.8E-9 T 15-10-2018 IPR012556 Entericidin A/B GO:0009636|GO:0016020 AM378_15160 3ee0d70fdb3efccca7fa0d3ac5967436 325 PIRSF PIRSF034367 1 325 5.8E-196 T 15-10-2018 IPR015004 Protein of unknown function DUF1852 AM378_15160 3ee0d70fdb3efccca7fa0d3ac5967436 325 Pfam PF08908 Domain of unknown function (DUF1852) 1 321 9.7E-185 T 15-10-2018 IPR015004 Protein of unknown function DUF1852 AM378_00070 33e1023f3fb0c2a25ae770fa754b881e 163 Pfam PF09619 Type III secretion system lipoprotein chaperone (YscW) 45 146 1.2E-40 T 15-10-2018 IPR039366 YscW/ExsB AM378_02925 b983190e1a22ce13f9d25a5b077f4e4a 15 Pfam PF08047 Histidine operon leader peptide 1 15 2.7E-9 T 15-10-2018 IPR012565 Histidine operon leader peptide GO:0000105 AM378_20770 b0f266acb267c3de07164c25ec61aa09 103 Pfam PF04341 Protein of unknown function, DUF485 11 98 2.4E-35 T 15-10-2018 IPR007436 Protein of unknown function DUF485 AM378_09000 933500d08593d431ad3e5388319e2d74 74 Pfam PF10798 Biofilm development protein YmgB/AriR 21 68 1.6E-7 T 15-10-2018 IPR024753 Regulatory protein AriR GO:0071468 AM378_01940 b894293ad4a654b77e3256f55a159dbe 170 SUPERFAMILY SSF55729 1 153 1.05E-26 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase AM378_01940 b894293ad4a654b77e3256f55a159dbe 170 Pfam PF00583 Acetyltransferase (GNAT) family 38 145 3.3E-16 T 15-10-2018 IPR000182 GNAT domain AM378_01940 b894293ad4a654b77e3256f55a159dbe 170 Gene3D G3DSA:3.40.630.30 2 170 6.7E-33 T 15-10-2018 AM378_17235 2e504dece323eabb5520c8f981e0729a 281 Gene3D G3DSA:1.10.3720.10 1 269 5.2E-36 T 15-10-2018 IPR035906 MetI-like superfamily AM378_17235 2e504dece323eabb5520c8f981e0729a 281 SUPERFAMILY SSF161098 5 275 1.21E-41 T 15-10-2018 IPR035906 MetI-like superfamily AM378_17235 2e504dece323eabb5520c8f981e0729a 281 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 94 269 7.5E-10 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AM378_08940 e597c7fc784428322aa38ed327dc408a 100 Pfam PF10765 Protein of unknown function (DUF2591) 29 97 1.9E-13 T 15-10-2018 IPR019701 Bacteriophage P22, NinX AM378_09315 601d2ec2f666e8ffb2b0a7f5f85f9f9a 389 Pfam PF17482 Phage tail sheath C-terminal domain 274 376 7.0E-19 T 15-10-2018 IPR020287 Tail sheath protein, C-terminal domain AM378_09315 601d2ec2f666e8ffb2b0a7f5f85f9f9a 389 Pfam PF04984 Phage tail sheath protein subtilisin-like domain 108 273 2.1E-35 T 15-10-2018 IPR035089 Tail sheath protein, subtilisin-like domain AM378_17355 02f15dc318802c92a5863d5ee4594e8f 157 Hamap MF_00598 Protein Smg [smg]. 1 157 32.582 T 15-10-2018 IPR007456 Smg AM378_17355 02f15dc318802c92a5863d5ee4594e8f 157 Pfam PF04361 Protein of unknown function (DUF494) 1 157 1.2E-61 T 15-10-2018 IPR007456 Smg AM378_04875 6d56da62b9b88c1f5f0631d9c5c01246 400 Pfam PF12704 MacB-like periplasmic core domain 27 208 2.4E-12 T 15-10-2018 IPR025857 MacB-like periplasmic core domain AM378_04875 6d56da62b9b88c1f5f0631d9c5c01246 400 TIGRFAM TIGR02212 lolCE: lipoprotein releasing system, transmembrane protein, LolC/E family 4 400 4.1E-142 T 15-10-2018 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E GO:0016021|GO:0042953|GO:0042954 AM378_04875 6d56da62b9b88c1f5f0631d9c5c01246 400 Pfam PF02687 FtsX-like permease family 297 393 2.0E-13 T 15-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 AM378_11040 4b82bd8660a43eb555fd3bff71ddff5c 117 Pfam PF05973 Phage derived protein Gp49-like (DUF891) 13 106 1.9E-22 T 15-10-2018 IPR009241 Toxin HigB-like AM378_12030 1c9c25a7aea3b2b8248a1cc1bd18283b 331 Gene3D G3DSA:1.10.3730.20 228 330 2.8E-5 T 15-10-2018 AM378_12030 1c9c25a7aea3b2b8248a1cc1bd18283b 331 SUPERFAMILY SSF103481 60 163 1.57E-13 T 15-10-2018 AM378_12030 1c9c25a7aea3b2b8248a1cc1bd18283b 331 SUPERFAMILY SSF103481 241 326 1.09E-13 T 15-10-2018 AM378_12030 1c9c25a7aea3b2b8248a1cc1bd18283b 331 Pfam PF00892 EamA-like transporter family 172 324 1.5E-14 T 15-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AM378_12030 1c9c25a7aea3b2b8248a1cc1bd18283b 331 Pfam PF00892 EamA-like transporter family 25 159 1.7E-16 T 15-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AM378_12535 f1b2a506d6fa78371a701ea700b6463f 263 Gene3D G3DSA:1.10.30.40 1 52 3.6E-10 T 15-10-2018 AM378_12535 f1b2a506d6fa78371a701ea700b6463f 263 Gene3D G3DSA:3.40.50.11240 64 241 3.6E-65 T 15-10-2018 AM378_12535 f1b2a506d6fa78371a701ea700b6463f 263 PIRSF PIRSF018982 1 253 1.2E-95 T 15-10-2018 IPR009246 Ethanolamine ammonia-lyase light chain GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7 AM378_12535 f1b2a506d6fa78371a701ea700b6463f 263 Pfam PF05985 Ethanolamine ammonia-lyase light chain (EutC) 8 242 6.0E-94 T 15-10-2018 IPR009246 Ethanolamine ammonia-lyase light chain GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7 AM378_07050 ccbe5681e9d45e17d6eebbffead937e9 151 Pfam PF11162 Protein of unknown function (DUF2946) 15 147 3.0E-16 T 15-10-2018 IPR021333 Protein of unknown function DUF2946 AM378_16770 83553376bc467e2fde08379635dbb47b 120 Pfam PF05973 Phage derived protein Gp49-like (DUF891) 17 105 4.6E-23 T 15-10-2018 IPR009241 Toxin HigB-like AM378_13720 7bf02add5dfbd991df90172da5ed4fcc 84 Pfam PF04606 Ogr/Delta-like zinc finger 3 48 3.3E-16 T 15-10-2018 IPR007684 Zinc finger, Ogr/Delta-type AM378_02695 92d5560467b56283723f8397a3b71c87 610 Pfam PF05170 AsmA family 4 268 6.2E-22 T 15-10-2018 IPR007844 AsmA AM378_02695 92d5560467b56283723f8397a3b71c87 610 Pfam PF13502 AsmA-like C-terminal region 351 536 3.2E-22 T 15-10-2018 IPR032712 AsmA-like, C-terminal AM378_20050 8ceb1af255b6cf89d1067dbbb1ea76fd 246 Hamap MF_01001 UDP-N-acetyl-D-mannosaminuronic acid transferase [wecG]. 1 246 59.676 T 15-10-2018 IPR023085 UDP-N-acetyl-D-mannosaminuronic acid transferase GO:0009246|GO:0016758 AM378_20050 8ceb1af255b6cf89d1067dbbb1ea76fd 246 Pfam PF03808 Glycosyl transferase WecB/TagA/CpsF family 65 231 2.1E-52 T 15-10-2018 IPR004629 Glycosyl transferase WecB/TagA/CpsF GO:0009058 AM378_20050 8ceb1af255b6cf89d1067dbbb1ea76fd 246 TIGRFAM TIGR00696 wecG_tagA_cpsF: glycosyltransferase, WecB/TagA/CpsF family 61 237 2.4E-73 T 15-10-2018 IPR004629 Glycosyl transferase WecB/TagA/CpsF GO:0009058 AM378_13975 4e1c9ca0d0e79f2f39618a7f14227700 95 Gene3D G3DSA:3.30.2310.20 1 93 1.6E-8 T 15-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily AM378_13975 4e1c9ca0d0e79f2f39618a7f14227700 95 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 4 93 6.0E-12 T 15-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family AM378_05970 34b3467943fb85059d66aa90a96135bc 167 Gene3D G3DSA:2.60.120.10 15 159 3.2E-32 T 15-10-2018 IPR014710 RmlC-like jelly roll fold AM378_05970 34b3467943fb85059d66aa90a96135bc 167 Pfam PF07883 Cupin domain 52 121 2.1E-17 T 15-10-2018 IPR013096 Cupin 2, conserved barrel AM378_05970 34b3467943fb85059d66aa90a96135bc 167 SUPERFAMILY SSF51182 33 137 5.94E-23 T 15-10-2018 IPR011051 RmlC-like cupin domain superfamily AM378_06585 e68ac47427db92ae28885210cc335cbe 144 SUPERFAMILY SSF54593 20 137 1.83E-12 T 15-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AM378_06585 e68ac47427db92ae28885210cc335cbe 144 Gene3D G3DSA:3.10.180.10 16 140 5.3E-10 T 15-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AM378_11475 a918ddb8e0b61d982c619206ece9450a 94 Hamap MF_01336 50S ribosomal protein L25 [rplY]. 2 94 28.467 T 15-10-2018 IPR020055 Ribosomal protein L25, short-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 AM378_11475 a918ddb8e0b61d982c619206ece9450a 94 Pfam PF01386 Ribosomal L25p family 4 91 8.0E-25 T 15-10-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 AM378_11475 a918ddb8e0b61d982c619206ece9450a 94 Gene3D G3DSA:2.40.240.10 1 94 3.2E-35 T 15-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 AM378_11475 a918ddb8e0b61d982c619206ece9450a 94 SUPERFAMILY SSF50715 1 94 3.14E-30 T 15-10-2018 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 AM378_11475 a918ddb8e0b61d982c619206ece9450a 94 ProDom PD012503 RIBOSOMAL L25 50S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN STRESS GENERAL CTC RRNA 6 93 7.0E-38 T 15-10-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 AM378_10280 2b0549f2b57aba27bc9b16460c448d40 82 Pfam PF04226 Transglycosylase associated protein 33 82 3.4E-15 T 15-10-2018 IPR007341 Transglycosylase-associated protein GO:0016021 AM378_24090 5963efe9b16f3b168f49c619c42f5397 518 Pfam PF03169 OPT oligopeptide transporter protein 17 195 3.4E-12 T 15-10-2018 IPR004813 Oligopeptide transporter, OPT superfamily GO:0055085 AM378_24090 5963efe9b16f3b168f49c619c42f5397 518 Pfam PF03169 OPT oligopeptide transporter protein 252 513 1.1E-19 T 15-10-2018 IPR004813 Oligopeptide transporter, OPT superfamily GO:0055085 AM378_09335 ddb3e670a77ca560dd31eba3c0aaa918 177 TIGRFAM TIGR01634 tail_P2_I: phage tail protein I 6 143 7.8E-62 T 15-10-2018 IPR006521 Tail protein I AM378_09335 ddb3e670a77ca560dd31eba3c0aaa918 177 Pfam PF09684 Phage tail protein (Tail_P2_I) 6 143 3.2E-50 T 15-10-2018 IPR006521 Tail protein I AM378_20810 b2bfc96a87fc63754b044c5dc0d022f4 410 Gene3D G3DSA:2.130.10.10 36 407 1.9E-74 T 15-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 AM378_20810 b2bfc96a87fc63754b044c5dc0d022f4 410 SUPERFAMILY SSF50969 71 391 7.06E-26 T 15-10-2018 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like AM378_20195 3eb9536530042872dc454ff978c0c194 347 Gene3D G3DSA:3.40.50.1820 30 334 1.9E-40 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold AM378_20195 3eb9536530042872dc454ff978c0c194 347 SUPERFAMILY SSF53474 15 335 5.71E-35 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold AM378_20195 3eb9536530042872dc454ff978c0c194 347 Pfam PF12146 Serine aminopeptidase, S33 55 315 1.4E-53 T 15-10-2018 IPR022742 Serine aminopeptidase, S33 AM378_07990 13581c071b4ba35fb155c070c38bd98a 205 SUPERFAMILY SSF141318 68 203 2.22E-13 T 15-10-2018 IPR036215 TM0957-like superfamily AM378_07990 13581c071b4ba35fb155c070c38bd98a 205 Pfam PF10054 Predicted periplasmic lipoprotein (DUF2291) 9 203 2.0E-44 T 15-10-2018 IPR014582 Uncharacterised conserved protein UCP033535, periplasmic lipoprotein AM378_00945 50159397ae26b3793b9220af4e305fd5 69 Pfam PF10725 Protein of unknown function (DUF2517) 5 64 2.2E-36 T 15-10-2018 IPR019663 Uncharacterised protein YbfA AM378_11750 77a91015e7b6ea2073b32c080d91600a 615 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 361 383 7.5E-8 T 15-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 AM378_11750 77a91015e7b6ea2073b32c080d91600a 615 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 420 442 7.5E-8 T 15-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 AM378_11750 77a91015e7b6ea2073b32c080d91600a 615 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 61 85 7.5E-8 T 15-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 AM378_11750 77a91015e7b6ea2073b32c080d91600a 615 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 87 107 7.5E-8 T 15-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 AM378_11750 77a91015e7b6ea2073b32c080d91600a 615 TIGRFAM TIGR01974 NDH_I_L: proton-translocating NADH-quinone oxidoreductase, chain L 2 612 2.8E-232 T 15-10-2018 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM378_11750 77a91015e7b6ea2073b32c080d91600a 615 Pfam PF00361 Proton-conducting membrane transporter 136 428 3.3E-96 T 15-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM378_11750 77a91015e7b6ea2073b32c080d91600a 615 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 160 181 1.1E-53 T 15-10-2018 AM378_11750 77a91015e7b6ea2073b32c080d91600a 615 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 250 276 1.1E-53 T 15-10-2018 AM378_11750 77a91015e7b6ea2073b32c080d91600a 615 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 318 330 1.1E-53 T 15-10-2018 AM378_11750 77a91015e7b6ea2073b32c080d91600a 615 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 421 440 1.1E-53 T 15-10-2018 AM378_11750 77a91015e7b6ea2073b32c080d91600a 615 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 228 249 1.1E-53 T 15-10-2018 AM378_11750 77a91015e7b6ea2073b32c080d91600a 615 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 85 110 1.1E-53 T 15-10-2018 AM378_11750 77a91015e7b6ea2073b32c080d91600a 615 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 113 133 1.1E-53 T 15-10-2018 AM378_11750 77a91015e7b6ea2073b32c080d91600a 615 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 67 124 8.9E-22 T 15-10-2018 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM378_02800 c717ab8b46106d49b0af98bfd411be49 996 Pfam PF13946 Domain of unknown function (DUF4214) 181 231 5.2E-5 T 15-10-2018 IPR025282 Domain of unknown function DUF4214 AM378_01200 bb9eb9c01073a764514c63d5c20f7e25 115 Pfam PF07769 psiF repeat 36 68 2.3E-15 T 15-10-2018 IPR011690 Phosphate-starvation-induced PsiF repeat AM378_01200 bb9eb9c01073a764514c63d5c20f7e25 115 Pfam PF07769 psiF repeat 80 112 6.1E-19 T 15-10-2018 IPR011690 Phosphate-starvation-induced PsiF repeat AM378_04320 9aae7693860d9aee9389c9b81eba74f0 173 Pfam PF02620 Uncharacterized ACR, COG1399 62 171 6.7E-18 T 15-10-2018 IPR003772 Large ribosomal RNA subunit accumulation protein YceD AM378_02700 0805e86de1a9739e884a8be61d9028d6 450 TIGRFAM TIGR00771 DcuC: transporter, anaerobic C4-dicarboxylate uptake C (DcuC) family 55 438 5.9E-174 T 15-10-2018 IPR004669 C4-dicarboxylate anaerobic carrier GO:0015556|GO:0015740|GO:0016021 AM378_02700 0805e86de1a9739e884a8be61d9028d6 450 Pfam PF03606 C4-dicarboxylate anaerobic carrier 3 448 1.1E-125 T 15-10-2018 IPR018385 C4-dicarboxylate anaerobic carrier-like GO:0016021 AM378_01605 0a99441c986549c80c55ba4980fdbfa2 67 Pfam PF11903 ParD-like antitoxin of type II bacterial toxin-antitoxin system 1 58 1.7E-22 T 15-10-2018 IPR021831 ParD-like antitoxin of type II bacterial toxin-antitoxin system AM378_06590 e40e3b58a5ecd8eb82cf41fc44f8bd67 112 Pfam PF10703 MoaF N-terminal domain 15 88 5.3E-6 T 15-10-2018 IPR024724 Molybdenum cofactor biosynthesis protein F, N-terminal AM378_04805 62a2c848f1429a593ff8042b1aeda0a6 92 Pfam PF10762 Protein of unknown function (DUF2583) 1 88 1.6E-45 T 15-10-2018 IPR019698 Protein of unknown function DUF2583 AM378_03165 f34c5b3b020f616781ab4641fab39411 169 Pfam PF06892 Phage regulatory protein CII (CP76) 4 158 4.0E-55 T 15-10-2018 IPR009679 Bacteriophage 186, CII AM378_20450 de1c9921fdfe596980572511e78d154b 543 Pfam PF03109 ABC1 family 113 231 3.6E-35 T 15-10-2018 IPR004147 UbiB domain AM378_20450 de1c9921fdfe596980572511e78d154b 543 TIGRFAM TIGR01982 UbiB: 2-polyprenylphenol 6-hydroxylase 6 445 1.2E-180 T 15-10-2018 IPR010232 Probable protein kinase UbiB GO:0006744 AM378_20450 de1c9921fdfe596980572511e78d154b 543 Hamap MF_00414 Probable protein kinase UbiB [ubiB]. 3 539 57.609 T 15-10-2018 IPR010232 Probable protein kinase UbiB GO:0006744 AM378_20450 de1c9921fdfe596980572511e78d154b 543 SUPERFAMILY SSF56112 94 435 1.93E-48 T 15-10-2018 IPR011009 Protein kinase-like domain superfamily AM378_09415 34dee52d153f6e1b38b2109da8a693c4 590 Pfam PF17289 Terminase RNaseH-like domain 413 571 5.0E-42 T 15-10-2018 IPR035421 Terminase, large subunit gp17-like AM378_09415 34dee52d153f6e1b38b2109da8a693c4 590 Pfam PF06056 Putative ATPase subunit of terminase (gpP-like) 12 69 2.2E-25 T 15-10-2018 IPR010332 ATPase terminase subunit, putative GO:0005524|GO:0019069 AM378_09415 34dee52d153f6e1b38b2109da8a693c4 590 Gene3D G3DSA:3.40.50.300 90 310 8.6E-17 T 15-10-2018 AM378_09415 34dee52d153f6e1b38b2109da8a693c4 590 Pfam PF03237 Terminase-like family 164 385 1.8E-53 T 15-10-2018 IPR004921 Terminase large subunit, T4likevirus-type AM378_09415 34dee52d153f6e1b38b2109da8a693c4 590 Gene3D G3DSA:3.30.420.240 396 571 6.8E-13 T 15-10-2018 AM378_16115 df89200090ef678fd0e8ad50f86db774 40 Pfam PF06528 Phage P2 GpE 1 37 9.4E-22 T 15-10-2018 IPR009493 Burkholderia phage phiE202, Gp27 AM378_21765 03f4b595d3c711c19530b2990eb990a5 1099 ProDom PD144061 ECS5259 GENOME STY4851 YJIT 1 488 0.0 T 15-10-2018 AM378_12085 d520d4b75eb2368767ae29b77f5dea4d 370 Pfam PF03600 Citrate transporter 24 313 7.1E-24 T 15-10-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 AM378_22445 19234b1c23307c5c79be1337f47233cd 159 PIRSF PIRSF003174 1 159 3.1E-69 T 15-10-2018 IPR010292 Uncharacterised protein family CreA AM378_22445 19234b1c23307c5c79be1337f47233cd 159 Pfam PF05981 CreA protein 24 155 2.7E-58 T 15-10-2018 IPR010292 Uncharacterised protein family CreA AM378_12925 ab168c7d751ceaed3890e20587a16c68 82 Pfam PF04226 Transglycosylase associated protein 33 81 4.5E-16 T 15-10-2018 IPR007341 Transglycosylase-associated protein GO:0016021 AM378_20095 14210ee0ecfaeafa8c7629ed635ce4f0 374 Pfam PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase 32 362 2.9E-139 T 15-10-2018 IPR007470 Putative uroporphyrinogen-III C-methyltransferase HemX AM378_08480 31b2273698959340cbcde93be1a5affe 58 Pfam PF10753 Toxin GhoT_OrtT 5 58 4.9E-23 T 15-10-2018 IPR019689 Toxin GhoT/OrtT AM378_12355 3113831bee3b7f26714c4ad5edd515d9 110 Pfam PF10697 Protein of unknown function (DUF2502) 24 70 3.3E-14 T 15-10-2018 IPR019638 Protein of unknown function DUF2502 AM378_12120 c0200354610ab2290f5e75df93930474 268 Pfam PF01925 Sulfite exporter TauE/SafE 14 249 1.5E-45 T 15-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 AM378_16100 159c113f79abe2964b3b9e39091b87d8 386 SUPERFAMILY SSF69279 15 187 7.94E-26 T 15-10-2018 AM378_16100 159c113f79abe2964b3b9e39091b87d8 386 Pfam PF05954 Phage late control gene D protein (GPD) 48 362 3.6E-35 T 15-10-2018 AM378_17205 6324c87ccd3136ae4878869b19c00174 305 Gene3D G3DSA:1.20.1530.20 1 305 6.3E-119 T 15-10-2018 IPR038770 Sodium/solute symporter superfamily AM378_17205 6324c87ccd3136ae4878869b19c00174 305 Pfam PF01758 Sodium Bile acid symporter family 36 213 9.4E-40 T 15-10-2018 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 AM378_09965 5ffae518d55f5ab39415f2751fb67d3b 152 Gene3D G3DSA:1.20.120.1620 32 143 2.4E-32 T 15-10-2018 IPR038314 T6SS superfamily AM378_09965 5ffae518d55f5ab39415f2751fb67d3b 152 Pfam PF16695 Type VI secretion system (T6SS), amidase immunity protein 40 125 1.4E-21 T 15-10-2018 IPR032032 Type VI secretion system (T6SS), amidase immunity protein AM378_23900 9849861e7c65ea00d72e5cc9bc4b7072 142 Gene3D G3DSA:3.40.50.620 3 141 3.9E-14 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM378_23900 9849861e7c65ea00d72e5cc9bc4b7072 142 SUPERFAMILY SSF52402 4 136 2.76E-10 T 15-10-2018 AM378_05610 ecf2dd86f303aa706eaad39158f8c382 480 Pfam PF02696 Uncharacterized ACR, YdiU/UPF0061 family 4 449 1.0E-154 T 15-10-2018 IPR003846 Uncharacterised protein family UPF0061 AM378_05610 ecf2dd86f303aa706eaad39158f8c382 480 Hamap MF_00692 UPF0061 protein YdiU [ydiU]. 1 466 45.22 T 15-10-2018 IPR003846 Uncharacterised protein family UPF0061 AM378_05675 ab9dd242d60f8f89d5820e41579df137 366 Pfam PF01594 AI-2E family transporter 15 345 9.1E-50 T 15-10-2018 IPR002549 Transmembrane protein TqsA-like AM378_09160 fb9bc451f5653033194d257b524b7b9f 282 Pfam PF14305 TupA-like ATPgrasp 42 280 1.2E-48 T 15-10-2018 IPR029465 TupA-like ATPgrasp protein AM378_12115 e3c8b9cf219f8ad5ec517637295832db 185 Pfam PF04315 Elongation factor P hydroxylase 16 178 3.3E-81 T 15-10-2018 IPR007411 Elongation factor P hydroxylase AM378_13715 204d945cb4d12b8e683172ed726fd567 1279 SUPERFAMILY SSF52540 215 377 3.72E-5 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM378_02575 dcb29e36d1be80b992a7842a623a225b 78 Pfam PF07362 Post-segregation antitoxin CcdA 9 78 3.5E-27 T 15-10-2018 IPR009956 Post-segregation antitoxin CcdA AM378_17600 73ea323eb82a803da6599e6795f036c2 75 Hamap MF_00715 Protein SlyX [slyX]. 8 75 16.527 T 15-10-2018 IPR007236 SlyX AM378_17600 73ea323eb82a803da6599e6795f036c2 75 Pfam PF04102 SlyX 11 75 8.4E-23 T 15-10-2018 IPR007236 SlyX AM378_22370 c2a2e09b7d3f4573ecd9baec21770ec0 477 Pfam PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase 77 209 4.5E-16 T 15-10-2018 IPR038731 Glycosyltransferase RgtA/B/C/D-like AM378_09405 bdd16f4c8a4e2de79db903167c7a23d7 399 TIGRFAM TIGR01551 major_capsid_P2: phage major capsid protein, P2 family 8 342 1.9E-96 T 15-10-2018 IPR006441 Bacteriophage P2, GpN, major capsid AM378_09405 bdd16f4c8a4e2de79db903167c7a23d7 399 Pfam PF05125 Phage major capsid protein, P2 family 8 341 8.6E-145 T 15-10-2018 IPR006441 Bacteriophage P2, GpN, major capsid AM378_16135 6ffdc6f29a0c3212e886dc0b07e55b35 139 Pfam PF02413 Caudovirales tail fibre assembly protein, lambda gpK 7 137 2.3E-32 T 15-10-2018 IPR003458 Bacteriophage T4, Gp38, tail fibre assembly AM378_09280 c514405f79c917fef905e26195109656 72 Pfam PF04606 Ogr/Delta-like zinc finger 3 49 2.2E-20 T 15-10-2018 IPR007684 Zinc finger, Ogr/Delta-type AM378_00170 da5a6c63cae14fbe40e3c85c2ff0442d 172 Pfam PF01292 Prokaryotic cytochrome b561 7 172 2.9E-17 T 15-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 AM378_00170 da5a6c63cae14fbe40e3c85c2ff0442d 172 SUPERFAMILY SSF81342 5 172 1.41E-21 T 15-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 AM378_13770 f34ed6fbcd7f981f930f87af123ec1c1 322 Pfam PF01548 Transposase 9 155 1.8E-15 T 15-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 AM378_13770 f34ed6fbcd7f981f930f87af123ec1c1 322 Pfam PF02371 Transposase IS116/IS110/IS902 family 196 278 5.4E-15 T 15-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 AM378_03120 cc3a53c5c1221be5e4be3cb27f09bf9e 230 SUPERFAMILY SSF51366 11 206 8.47E-7 T 15-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 AM378_14815 30677c8c230a898aa4400fe68f9f3fbc 192 Gene3D G3DSA:2.60.120.620 1 191 5.2E-51 T 15-10-2018 AM378_14815 30677c8c230a898aa4400fe68f9f3fbc 192 Pfam PF10014 2OG-Fe dioxygenase 2 186 6.5E-52 T 15-10-2018 IPR018724 2OG-Fe dioxygenase AM378_14485 946f29524a9e3836fdfe1283bf41d577 148 Pfam PF10713 Protein of unknown function (DUF2509) 17 146 1.7E-37 T 15-10-2018 IPR019652 Protein of unknown function DUF2509 AM378_10000 8a196f4b908ac63543e3e7b4e7cf5fb8 191 SUPERFAMILY SSF160719 69 178 4.05E-9 T 15-10-2018 AM378_10000 8a196f4b908ac63543e3e7b4e7cf5fb8 191 Pfam PF04965 Gene 25-like lysozyme 63 167 8.6E-21 T 15-10-2018 IPR007048 GpW/Gp25/anti-adapter protein IraD AM378_00375 87064ca4780995e70a783bda1d91cbb3 268 Pfam PF01963 TraB family 31 268 1.1E-43 T 15-10-2018 IPR002816 Pheromone shutdown, TraB AM378_17145 4b330c97a6411d27ac5b88d0d660da0c 301 Pfam PF07148 Maltose operon periplasmic protein precursor (MalM) 71 203 1.8E-53 T 15-10-2018 IPR010794 Maltose operon periplasmic GO:0008643|GO:0042597 AM378_07980 fb4ac59777c335105f5f934535b9bfe3 354 Pfam PF02653 Branched-chain amino acid transport system / permease component 43 320 1.9E-44 T 15-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 AM378_16980 32ea4eef9caabcb19b2e793e1d4440c2 453 Pfam PF00860 Permease family 30 413 5.8E-83 T 15-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 AM378_05915 cf5d44feb8424773cb712442b71d5f6e 1034 Pfam PF13946 Domain of unknown function (DUF4214) 5 52 2.7E-5 T 15-10-2018 IPR025282 Domain of unknown function DUF4214 AM378_05915 cf5d44feb8424773cb712442b71d5f6e 1034 Pfam PF13946 Domain of unknown function (DUF4214) 196 242 8.4E-7 T 15-10-2018 IPR025282 Domain of unknown function DUF4214 AM378_13940 c03d71b48257ca3b57611a355a941269 102 Pfam PF05957 Bacterial protein of unknown function (DUF883) 11 102 7.5E-29 T 15-10-2018 IPR010279 Inner membrane protein YqjD/ElaB GO:0043022 AM378_09085 f754bad499b0a81e577056ecd6105614 377 Pfam PF04116 Fatty acid hydroxylase superfamily 78 211 8.6E-27 T 15-10-2018 IPR006694 Fatty acid hydroxylase GO:0005506|GO:0008610|GO:0016491|GO:0055114 AM378_07395 5ea3a4a8ea29279d14058b931e3d6342 316 Pfam PF02653 Branched-chain amino acid transport system / permease component 8 300 3.1E-49 T 15-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 AM378_04455 e0fc98cf9328a1ae3207e4ed0e656464 174 Pfam PF05433 Glycine zipper 2TM domain 69 109 3.0E-11 T 15-10-2018 IPR008816 Glycine zipper 2TM domain GO:0019867 AM378_22315 7defd6c42a0c16d79e0a8da3962e0513 260 PIRSF PIRSF005902 1 260 4.6E-67 T 15-10-2018 IPR001130 TatD family GO:0016788 AM378_22315 7defd6c42a0c16d79e0a8da3962e0513 260 Pfam PF01026 TatD related DNase 6 256 2.2E-67 T 15-10-2018 IPR001130 TatD family GO:0016788 AM378_22315 7defd6c42a0c16d79e0a8da3962e0513 260 ProSitePatterns PS01090 TatD deoxyribonuclease family signature 2. 129 139 - T 15-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 AM378_22315 7defd6c42a0c16d79e0a8da3962e0513 260 Gene3D G3DSA:3.20.20.140 2 259 6.0E-89 T 15-10-2018 AM378_22315 7defd6c42a0c16d79e0a8da3962e0513 260 SUPERFAMILY SSF51556 5 257 2.62E-76 T 15-10-2018 IPR032466 Metal-dependent hydrolase AM378_03525 e2d6b12211cedf9d57fa76ac782103cb 408 Pfam PF06224 Winged helix DNA-binding domain 38 382 7.2E-90 T 15-10-2018 IPR009351 Protein of unknown function DUF1006 AM378_06290 f907f5bff664c473bab84d10596f3b20 146 Pfam PF02794 RTX toxin acyltransferase family 20 137 6.8E-11 T 15-10-2018 IPR003996 RTX toxin-activating protein C, bacteria GO:0005737|GO:0009404|GO:0016746 AM378_03010 299fce0a11ee477bd2f3dbabe2f0ad49 109 Gene3D G3DSA:1.10.10.10 35 85 6.7E-8 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM378_02745 b697439d62cd446a7ba5a4e5505880ae 412 Pfam PF01943 Polysaccharide biosynthesis protein 7 273 8.9E-9 T 15-10-2018 IPR002797 Polysaccharide biosynthesis protein GO:0016020 AM378_21420 f0bebcfb9fe63868d1250523855d0f9f 379 Gene3D G3DSA:3.40.1710.10 36 173 1.7E-5 T 15-10-2018 AM378_21420 f0bebcfb9fe63868d1250523855d0f9f 379 Pfam PF12698 ABC-2 family transporter protein 21 358 2.7E-30 T 15-10-2018 AM378_20900 a699b095cbe4618d9e24646900b83238 162 Pfam PF04186 FxsA cytoplasmic membrane protein 8 109 2.0E-32 T 15-10-2018 IPR007313 FxsA cytoplasmic membrane protein GO:0016020 AM378_13985 8f616b65a76592a77aea90ba54993cf1 64 Pfam PF06945 Protein of unknown function (DUF1289) 14 60 3.9E-18 T 15-10-2018 IPR010710 Protein of unknown function DUF1289 AM378_08960 80407051ae022f48d97e0b011ce6975b 77 Pfam PF13996 YobH-like protein 4 71 2.9E-35 T 15-10-2018 IPR025611 YobH-like protein AM378_05025 870c66fa3ecb5ddcac2d9068a5559577 112 Pfam PF07007 Lysozyme inhibitor LprI 26 101 3.0E-5 T 15-10-2018 IPR009739 Lysozyme inhibitor LprI, N-terminal AM378_05025 870c66fa3ecb5ddcac2d9068a5559577 112 PIRSF PIRSF037256 1 112 6.7E-46 T 15-10-2018 IPR017160 Uncharacterised conserved protein UCP037256 AM378_08915 1d5021f260a783fd26ca8ae6972b72e1 38 Pfam PF10736 Protein of unknown function (DUF2627) 1 38 3.9E-29 T 15-10-2018 IPR019672 Protein of unknown function DUF2627 AM378_18180 8132b5523be4b41a915829b29ef7df69 178 SUPERFAMILY SSF49401 32 178 1.59E-38 T 15-10-2018 IPR008966 Adhesion domain superfamily AM378_18180 8132b5523be4b41a915829b29ef7df69 178 Pfam PF00419 Fimbrial protein 34 178 9.7E-19 T 15-10-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM378_18180 8132b5523be4b41a915829b29ef7df69 178 Gene3D G3DSA:2.60.40.1090 29 178 4.9E-38 T 15-10-2018 IPR036937 Fimbrial-type adhesion domain superfamily GO:0007155|GO:0009289 AM378_10500 2be8793425614a6c4175bdfed27aeeb1 212 Gene3D G3DSA:2.60.40.1090 65 212 3.3E-28 T 15-10-2018 IPR036937 Fimbrial-type adhesion domain superfamily GO:0007155|GO:0009289 AM378_10500 2be8793425614a6c4175bdfed27aeeb1 212 SUPERFAMILY SSF49401 55 212 6.46E-28 T 15-10-2018 IPR008966 Adhesion domain superfamily AM378_03785 e18938465ae2d419cc9e7a00dfa689d1 219 Pfam PF01027 Inhibitor of apoptosis-promoting Bax1 19 213 1.0E-40 T 15-10-2018 IPR006214 Bax inhibitor 1-related AM378_16235 81a80a5383c308dfb00498c94ba1f074 113 Pfam PF05534 HicB family 55 100 2.0E-14 T 15-10-2018 IPR008651 Uncharacterised protein family HicB AM378_22725 0fcddc04fcba9c3fbfeacd7ec6ab09c9 57 Pfam PF15894 Inhibitor of glucose uptake transporter SgrT 6 54 4.5E-28 T 15-10-2018 IPR031767 Inhibitor of glucose uptake transporter SgrT GO:0046325 AM378_12020 4e63fd6a5233be5951ef1fefab085100 505 Pfam PF01970 Tripartite tricarboxylate transporter TctA family 20 440 2.3E-144 T 15-10-2018 IPR002823 Protein of unknown function DUF112, transmembrane AM378_18540 8b997bc9be4356b4909de686c994f279 32 Pfam PF08046 IlvGEDA operon leader peptide 1 32 1.2E-20 T 15-10-2018 IPR012567 IlvGEDA operon leader peptide GO:0009082 AM378_12930 e713c970fbc02d9e7f11f4ae98572e3d 216 Gene3D G3DSA:3.30.240.20 156 212 4.0E-9 T 15-10-2018 IPR023090 UPF0702, alpha/beta domain superfamily AM378_12930 e713c970fbc02d9e7f11f4ae98572e3d 216 Gene3D G3DSA:3.30.240.20 81 155 4.1E-14 T 15-10-2018 IPR023090 UPF0702, alpha/beta domain superfamily AM378_12930 e713c970fbc02d9e7f11f4ae98572e3d 216 Pfam PF04239 Protein of unknown function (DUF421) 91 191 2.2E-21 T 15-10-2018 IPR007353 Protein of unknown function DUF421 AM378_07445 9c074e31e97ec8f9c2215992f7745802 536 Pfam PF01384 Phosphate transporter family 81 526 6.1E-86 T 15-10-2018 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: R-HSA-427652 AM378_12220 07f97cd08b135407118fe787e7f46d12 308 Gene3D G3DSA:1.20.1080.10 38 293 1.4E-36 T 15-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 AM378_12220 07f97cd08b135407118fe787e7f46d12 308 Pfam PF01226 Formate/nitrite transporter 43 279 4.0E-43 T 15-10-2018 IPR000292 Formate/nitrite transporter GO:0016020|GO:0022857|GO:0055085 AM378_08955 a311fa7fe833e182f8cb5d7928979ce1 47 Pfam PF13998 MgrB protein 19 47 6.1E-18 T 15-10-2018 IPR020907 PhoP/PhoQ regulator MgrB AM378_13900 b3752dcd67c80b718c17e53ce309f43f 111 Pfam PF04899 MbeD/MobD like 3 61 8.3E-9 T 15-10-2018 IPR006983 MbeD/MobD-like AM378_10190 8bd97d2c401d3b520bfa29fdec3e3d7b 257 Pfam PF11750 Protein of unknown function (DUF3307) 8 118 2.7E-25 T 15-10-2018 IPR021737 Bacteriophage phiKZ, Orf197 AM378_11705 f280fce61d373191c492bbb73868d113 103 Pfam PF05957 Bacterial protein of unknown function (DUF883) 11 103 3.4E-30 T 15-10-2018 IPR010279 Inner membrane protein YqjD/ElaB GO:0043022 AM378_04125 57b09184e154781309578b1bcc753c11 99 Pfam PF10796 Sigma-S stabilisation anti-adaptor protein 8 61 3.8E-5 T 15-10-2018 IPR019732 Sigma-S stabilisation anti-adaptor protein GO:0005737 AM378_04250 da81a3124c2de30bc24653e420d7f24c 352 Pfam PF01594 AI-2E family transporter 14 328 1.9E-73 T 15-10-2018 IPR002549 Transmembrane protein TqsA-like AM378_04390 e354afc4c1386b607f7068b334aa7bdc 121 Pfam PF13788 Domain of unknown function (DUF4180) 10 119 2.8E-35 T 15-10-2018 IPR025438 Domain of unknown function DUF4180 AM378_22535 9dc79620e3357b75f47faaeb5f89707f 80 Pfam PF10837 Protein of unknown function (DUF2575) 33 55 1.2E-7 T 15-10-2018 IPR020105 Uncharacterised protein family YaaY AM378_01635 cc6a00ed81d734954d4ef311f54302a3 307 SUPERFAMILY SSF51395 14 275 1.46E-6 T 15-10-2018 AM378_09320 9eb31925aa8401a1ac78e848f6e987e6 72 Pfam PF10798 Biofilm development protein YmgB/AriR 19 67 1.9E-5 T 15-10-2018 IPR024753 Regulatory protein AriR GO:0071468 AM378_04175 19fe3445a39f0bfc0df0f6dcd0d78d48 125 Pfam PF13984 MsyB protein 3 125 9.2E-62 T 15-10-2018 IPR025729 MsyB protein AM378_16095 582e25be0b63205f34a67647a40bd530 76 Pfam PF04606 Ogr/Delta-like zinc finger 3 46 1.4E-20 T 15-10-2018 IPR007684 Zinc finger, Ogr/Delta-type AM378_19020 0743dc2e5aea07287ede091cf26b9af2 144 Pfam PF12098 Protein of unknown function (DUF3574) 43 144 1.3E-39 T 15-10-2018 IPR021957 Protein of unknown function DUF3574 AM378_13540 0a437d3dc09c0db58d9bb36cb68739da 354 Pfam PF09925 Predicted membrane protein (DUF2157) 18 168 6.0E-7 T 15-10-2018 IPR018677 Domain of unknown function DUF2157 AM378_05850 fd46635a6b38e6f2d5c9472988e84f4b 79 Pfam PF06945 Protein of unknown function (DUF1289) 12 57 1.0E-18 T 15-10-2018 IPR010710 Protein of unknown function DUF1289 AM378_06655 0aded5d2316e34dbb5573e692d1134cb 44 Pfam PF10766 Multidrug efflux pump-associated protein AcrZ 1 43 2.6E-21 T 15-10-2018 IPR019702 Multidrug efflux pump accessory protein AcrZ GO:0005886|GO:0006855|GO:0015238 AM378_00715 d6d017495327e6797c9f6c55e904e1c6 160 Pfam PF07295 Zinc-ribbon containing domain 14 157 6.8E-55 T 15-10-2018 IPR009912 Zinc-ribbon containing domain AM378_07655 255550abf36dcdcde607a6454f3ecc88 84 Pfam PF03891 Domain of unknown function (DUF333) 27 80 2.1E-17 T 15-10-2018 IPR005590 Protein of unknown function DUF333 AM378_13740 d2239aa4025642f23e9bfd1178e20719 181 Pfam PF10554 Ash protein family 21 130 3.8E-29 T 15-10-2018 IPR018880 Bacteriophage P4, Ash protein AM378_15955 f8e6ba68b3d7a407e553b65b35e13a8c 141 Pfam PF06853 Protein of unknown function (DUF1249) 22 135 1.7E-41 T 15-10-2018 IPR009659 Protein of unknown function DUF1249 AM378_20915 59c72ccebdeb04272e04da6f547a0fd0 114 Pfam PF13698 Domain of unknown function (DUF4156) 23 113 6.2E-33 T 15-10-2018 IPR025294 Protein of unknown function DUF4156 AM378_03770 091c5b0073913b3b42a4f8d5c23822c0 320 Pfam PF01757 Acyltransferase family 8 295 7.6E-19 T 15-10-2018 IPR002656 Acyltransferase 3 GO:0016747 AM378_23710 9b674cc8d23ba00e6b4c5d34c901291c 94 Pfam PF13031 Protein of unknown function (DUF3892) 5 91 3.6E-23 T 15-10-2018 IPR024997 Protein of unknown function DUF3892 AM378_05325 5216fd0cbe56a13b0ba5d2054aa60fff 876 Pfam PF02470 MlaD protein 746 807 8.1E-8 T 15-10-2018 IPR003399 Mce/MlaD AM378_05325 5216fd0cbe56a13b0ba5d2054aa60fff 876 Pfam PF02470 MlaD protein 281 348 2.4E-6 T 15-10-2018 IPR003399 Mce/MlaD AM378_05325 5216fd0cbe56a13b0ba5d2054aa60fff 876 Pfam PF02470 MlaD protein 46 137 7.9E-17 T 15-10-2018 IPR003399 Mce/MlaD AM378_05325 5216fd0cbe56a13b0ba5d2054aa60fff 876 Pfam PF02470 MlaD protein 394 455 9.4E-6 T 15-10-2018 IPR003399 Mce/MlaD AM378_05325 5216fd0cbe56a13b0ba5d2054aa60fff 876 Pfam PF02470 MlaD protein 634 722 8.7E-10 T 15-10-2018 IPR003399 Mce/MlaD AM378_05325 5216fd0cbe56a13b0ba5d2054aa60fff 876 Pfam PF02470 MlaD protein 163 220 2.9E-6 T 15-10-2018 IPR003399 Mce/MlaD AM378_01480 4c8d9ee65cede26ed0db5d4730c997f5 145 Pfam PF05232 Chlorhexidine efflux transporter 3 65 1.5E-18 T 15-10-2018 IPR007896 Chlorhexidine efflux transporter AM378_01480 4c8d9ee65cede26ed0db5d4730c997f5 145 Pfam PF05232 Chlorhexidine efflux transporter 71 133 1.0E-24 T 15-10-2018 IPR007896 Chlorhexidine efflux transporter AM378_08130 959da90f55859ec049c4f60068af408a 146 Pfam PF03692 Putative zinc- or iron-chelating domain 7 98 4.1E-11 T 15-10-2018 IPR005358 Putative zinc- or iron-chelating domain containing protein AM378_05195 5075ebe639539ee26f61b8531a17a830 161 Gene3D G3DSA:3.10.450.160 60 161 3.1E-40 T 15-10-2018 AM378_01300 4036f8cf23b6bf9efe4bff06250e97fb 133 Pfam PF06803 Protein of unknown function (DUF1232) 41 77 5.2E-14 T 15-10-2018 IPR010652 Domain of unknown function DUF1232 MetaCyc: PWY-7511 AM378_07690 7ce08d20b7edf4208207e2c9ab6a68e5 345 SUPERFAMILY SSF53474 43 327 8.86E-8 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold AM378_22610 64ae95f8bec20ffbb5a0e1ef0ae3a52d 204 PIRSF PIRSF006324 1 204 6.1E-58 T 15-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AM378_22610 64ae95f8bec20ffbb5a0e1ef0ae3a52d 204 Pfam PF01810 LysE type translocator 15 203 1.6E-35 T 15-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AM378_21465 cf326bd2cc26ef9b5ca99e10ec372228 34 Pfam PF10940 Protein of unknown function (DUF2618) 8 32 2.6E-11 T 15-10-2018 IPR021237 Protein of unknown function DUF2618 AM378_15180 efab801adab0e8dffab140f487667eac 222 Pfam PF07077 Protein of unknown function (DUF1345) 39 212 4.4E-56 T 15-10-2018 IPR009781 Protein of unknown function DUF1345 AM378_00470 057b72d7b561e0491de2faee2122994f 289 Pfam PF11392 Protein of unknown function (DUF2877) 160 264 2.7E-24 T 15-10-2018 IPR021530 Protein of unknown function DUF2877 AM378_16180 04d7c2b3a841feb03564d662f6213585 158 Pfam PF06891 P2 phage tail completion protein R (GpR) 1 131 1.0E-46 T 15-10-2018 IPR009678 Bacteriophage tail completion protein R AM378_11535 151700babeb6b77ba79c763480252512 341 Pfam PF03916 Polysulphide reductase, NrfD 11 291 8.8E-33 T 15-10-2018 IPR005614 NrfD family AM378_10310 4d31ff4dd9e55f453ea3ea2e78ffcd51 297 Pfam PF11004 3-deoxy-D-manno-oct-2-ulosonic acid (Kdo) hydroxylase 24 296 8.7E-112 T 15-10-2018 IPR021266 Kdo hydroxylase AM378_09325 d87e86eb0866974be6730161e5d93cb1 174 Pfam PF02413 Caudovirales tail fibre assembly protein, lambda gpK 35 172 2.3E-34 T 15-10-2018 IPR003458 Bacteriophage T4, Gp38, tail fibre assembly AM378_00090 7845183b55999fc8bb0808be5f6d04b4 164 Pfam PF15941 FidL-like putative membrane protein 81 160 6.8E-10 T 15-10-2018 IPR031854 Putative membrane protein FidL-like AM378_01835 647fa99f9ce7def6e30a2395b9ddf8c9 367 Pfam PF05076 Suppressor of fused protein (SUFU) 200 363 1.3E-20 T 15-10-2018 IPR020941 Suppressor of fused-like domain Reactome: R-HSA-5610780|Reactome: R-HSA-5610783|Reactome: R-HSA-5610785|Reactome: R-HSA-5610787|Reactome: R-HSA-5632684 AM378_06335 6278bc5120aa5f7930c7e5286505aec6 352 SUPERFAMILY SSF144052 24 341 9.94E-14 T 15-10-2018 AM378_04585 5fe7f97ee7001fefeaa24476aa553864 116 Pfam PF14302 Domain of unknown function (DUF4377) 40 113 2.9E-29 T 15-10-2018 IPR025485 Domain of unknown function DUF4377 AM378_06630 9aa1335e051608519dfad4e29ab967ad 412 SUPERFAMILY SSF56935 50 383 2.47E-6 T 15-10-2018 AM378_08530 4e9df4710bc62f82b63285dc51f48016 511 Pfam PF04293 SpoVR like protein 20 451 4.6E-177 T 15-10-2018 IPR007390 Sporulation stage V, protein R AM378_04565 f502f017bb332a2c3d5aaa945204c657 293 Pfam PF05425 Copper resistance protein D 188 286 1.7E-17 T 15-10-2018 IPR008457 Copper resistance protein D GO:0016021 AM378_06955 91d508e6774b6f1c39c4bce41dd6094b 70 Pfam PF07869 Protein of unknown function (DUF1656) 4 59 8.8E-17 T 15-10-2018 IPR012451 Protein of unknown function DUF1656 AM378_23280 ff34d6a8ab3c60544b26b8dfb6e4dee4 142 Pfam PF09335 SNARE associated Golgi protein 25 133 3.6E-8 T 15-10-2018 IPR032816 SNARE associated Golgi protein AM378_15155 9267ff782c514a54354313e63278a64d 179 Pfam PF09831 Uncharacterized protein conserved in bacteria (DUF2058) 5 179 3.2E-59 T 15-10-2018 IPR018636 Protein of unknown function DUF2058 AM378_11945 4e564bb3bffa5922e21a6b2041915562 166 Pfam PF02674 Colicin V production protein 4 142 5.9E-37 T 15-10-2018 IPR003825 Colicin V production, CvpA GO:0009403|GO:0016020 AM378_16185 da48029e317a3f6ed8688037da38b4d6 142 TIGRFAM TIGR03495 phage_LysB: phage lysis regulatory protein, LysB family 7 137 6.7E-39 T 15-10-2018 IPR020000 Bacteriophage P2, LysB AM378_10965 339ca6d1e902bf162373226a6ee82f58 141 Pfam PF07681 DoxX 25 99 8.2E-13 T 15-10-2018 IPR032808 DoxX family AM378_14525 b1cc2ee11a4c6b04b7a1df413bf0cfa1 238 Pfam PF03741 Integral membrane protein TerC family 16 202 1.2E-53 T 15-10-2018 IPR005496 Integral membrane protein TerC GO:0016021