locus_tag old_locus_tag gene Name start end strand product note type ID NCBI QCQ57351.1 38355 38501 + hypothetical protein CDS cds-QCQ57351.1 http://www.ncbi.nlm.nih.gov/gene/?term= QCQ57353.1 40108 40575 + hypothetical protein CDS cds-QCQ57353.1 http://www.ncbi.nlm.nih.gov/gene/?term= QCQ57293.1 4147 4461 - hypothetical protein CDS cds-QCQ57293.1 http://www.ncbi.nlm.nih.gov/gene/?term= QCQ57326.1 29336 29770 + hypothetical protein CDS cds-QCQ57326.1 http://www.ncbi.nlm.nih.gov/gene/?term= QCQ57310.1 19613 20617 - HNH nuclease HNH endonuclease signature which is found in viral%2C prokaryotic%2C and eukaryotic proteins. The alignment includes members of the CDS cds-QCQ57310.1 http://www.ncbi.nlm.nih.gov/gene/?term= QCQ57303.1 12693 14882 + chaperone of endosialidase This is the very C-terminal%2C chaperone%2C domain of the bacteriophage protein endosialidase. It releases itself%2C via the serine-l CDS cds-QCQ57303.1 http://www.ncbi.nlm.nih.gov/gene/?term= QCQ57360.1 43916 44107 - hypothetical protein CDS cds-QCQ57360.1 http://www.ncbi.nlm.nih.gov/gene/?term= QCQ57354.1 40578 41648 + hypothetical protein CDS cds-QCQ57354.1 http://www.ncbi.nlm.nih.gov/gene/?term= QCQ57356.1 41918 42454 - beta clamp domain protein The beta subunit (processivity factor) of DNA polymerase III holoenzyme%2C refered to as the beta clamp%2C forms a ring shaped dime CDS cds-QCQ57356.1 http://www.ncbi.nlm.nih.gov/gene/?term= QCQ57321.1 25789 26136 + hypothetical protein CDS cds-QCQ57321.1 http://www.ncbi.nlm.nih.gov/gene/?term= QCQ57340.1 34960 35268 - hypothetical protein CDS cds-QCQ57340.1 http://www.ncbi.nlm.nih.gov/gene/?term= QCQ57314.1 23797 24069 - hypothetical protein CDS cds-QCQ57314.1 http://www.ncbi.nlm.nih.gov/gene/?term= QCQ57322.1 26466 26639 + hypothetical protein CDS cds-QCQ57322.1 http://www.ncbi.nlm.nih.gov/gene/?term= QCQ57335.1 33494 33958 + lysozyme The lysozyme from bacteriophage lambda hydrolyses the beta-1%2C4-glycosidic bond between N-acetylmuramic acid (MurNAc) and N-acet CDS cds-QCQ57335.1 http://www.ncbi.nlm.nih.gov/gene/?term= QCQ57348.1 37540 37773 + hypothetical protein CDS cds-QCQ57348.1 http://www.ncbi.nlm.nih.gov/gene/?term= QCQ57336.1 33955 34194 + hypothetical protein CDS cds-QCQ57336.1 http://www.ncbi.nlm.nih.gov/gene/?term= QCQ57343.1 36024 36221 + hypothetical protein CDS cds-QCQ57343.1 http://www.ncbi.nlm.nih.gov/gene/?term= QCQ57320.1 25349 25792 + hypothetical protein CDS cds-QCQ57320.1 http://www.ncbi.nlm.nih.gov/gene/?term= QCQ57344.1 36473 36694 + hypothetical protein CDS cds-QCQ57344.1 http://www.ncbi.nlm.nih.gov/gene/?term= QCQ57331.1 31833 32786 + hypothetical protein Phage Mu protein F like protein%3B Members of this family are found in double-stranded DNA bacteriophages%2C and in some bacteria. A member of this family is requir CDS cds-QCQ57331.1 http://www.ncbi.nlm.nih.gov/gene/?term= QCQ57288.1 1255 1596 + hypothetical protein CDS cds-QCQ57288.1 http://www.ncbi.nlm.nih.gov/gene/?term= QCQ57286.1 601 885 + hypothetical protein CDS cds-QCQ57286.1 http://www.ncbi.nlm.nih.gov/gene/?term= QCQ57325.1 28846 29052 + hypothetical protein CDS cds-QCQ57325.1 http://www.ncbi.nlm.nih.gov/gene/?term= QCQ57323.1 26758 27204 + hypothetical protein CDS cds-QCQ57323.1 http://www.ncbi.nlm.nih.gov/gene/?term= QCQ57308.1 17243 17683 - hypothetical protein CDS cds-QCQ57308.1 http://www.ncbi.nlm.nih.gov/gene/?term= QCQ57291.1 3209 3925 + penicillin-binding protein C-terminus family protein This conserved region of approximately 90 residues is found in a sub-group of bacterial Penicillin-Binding Proteins (PBPs). A v CDS cds-QCQ57291.1 http://www.ncbi.nlm.nih.gov/gene/?term= QCQ57312.1 21744 22160 - hypothetical protein CDS cds-QCQ57312.1 http://www.ncbi.nlm.nih.gov/gene/?term= QCQ57358.1 42614 43105 - HNH endonuclease This is a zinc-binding loop of Fold group 7 as found in endo-deoxy-ribonucleases and HNH nucleases. CDS cds-QCQ57358.1 http://www.ncbi.nlm.nih.gov/gene/?term= QCQ57361.1 44110 44370 - hypothetical protein CDS cds-QCQ57361.1 http://www.ncbi.nlm.nih.gov/gene/?term= QCQ57329.1 30150 30395 + hypothetical protein CDS cds-QCQ57329.1 http://www.ncbi.nlm.nih.gov/gene/?term= QCQ57324.1 27345 28769 + terminase large subunit Initiation of packaging of double-stranded viral DNA involves the specific interaction of the prohead with viral DNA in a proce CDS cds-QCQ57324.1 http://www.ncbi.nlm.nih.gov/gene/?term= QCQ57284.1 9 128 + hypothetical protein CDS cds-QCQ57284.1 http://www.ncbi.nlm.nih.gov/gene/?term= QCQ57299.1 8852 9325 + hypothetical protein CDS cds-QCQ57299.1 http://www.ncbi.nlm.nih.gov/gene/?term= QCQ57357.1 42454 42627 - hypothetical protein CDS cds-QCQ57357.1 http://www.ncbi.nlm.nih.gov/gene/?term= QCQ57298.1 5943 8852 + RecF/RecN/SMC N terminal domain protein This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins ha CDS cds-QCQ57298.1 http://www.ncbi.nlm.nih.gov/gene/?term= QCQ57337.1 34175 34669 + hypothetical protein CDS cds-QCQ57337.1 http://www.ncbi.nlm.nih.gov/gene/?term= QCQ57338.1 34643 34783 - hypothetical protein CDS cds-QCQ57338.1 http://www.ncbi.nlm.nih.gov/gene/?term= QCQ57359.1 43105 43923 - chromosome segregation protein Chromosome segregation protein Spo0J%3B contains ParB-like nuclease domain [Cell cycle control%2C cell division%2C chromosome partitioning] CDS cds-QCQ57359.1 http://www.ncbi.nlm.nih.gov/gene/?term= QCQ57300.1 9325 9795 + hypothetical protein CDS cds-QCQ57300.1 http://www.ncbi.nlm.nih.gov/gene/?term= QCQ57305.1 15408 16070 - DNA single-strand annealing protein such as RecT%2C Red-beta%2C ERF and Rad52%2C function in RecA-dependent and RecA-independent DNA recombination pathways. This family CDS cds-QCQ57305.1 http://www.ncbi.nlm.nih.gov/gene/?term= QCQ57294.1 4458 4601 - hypothetical protein CDS cds-QCQ57294.1 http://www.ncbi.nlm.nih.gov/gene/?term= QCQ57307.1 17027 17203 - hypothetical protein CDS cds-QCQ57307.1 http://www.ncbi.nlm.nih.gov/gene/?term= QCQ57295.1 4598 4792 - superinfection immunity protein This family includes the E. coli bacteriophage T4 superinfection immunity (imm) protein. When E. coli is sequentially infected CDS cds-QCQ57295.1 http://www.ncbi.nlm.nih.gov/gene/?term= QCQ57317.1 24716 24811 + hypothetical protein CDS cds-QCQ57317.1 http://www.ncbi.nlm.nih.gov/gene/?term= QCQ57301.1 9788 10237 + hypothetical protein CDS cds-QCQ57301.1 http://www.ncbi.nlm.nih.gov/gene/?term= QCQ57292.1 3956 4150 - hypothetical protein CDS cds-QCQ57292.1 http://www.ncbi.nlm.nih.gov/gene/?term= QCQ57350.1 38032 38358 + hypothetical protein CDS cds-QCQ57350.1 http://www.ncbi.nlm.nih.gov/gene/?term= QCQ57315.1 24330 24464 + hypothetical protein CDS cds-QCQ57315.1 http://www.ncbi.nlm.nih.gov/gene/?term= QCQ57349.1 37763 38035 + hypothetical protein CDS cds-QCQ57349.1 http://www.ncbi.nlm.nih.gov/gene/?term= QCQ57332.1 32869 32967 - hypothetical protein CDS cds-QCQ57332.1 http://www.ncbi.nlm.nih.gov/gene/?term= QCQ57334.1 33226 33504 + lysozyme-like domain protein This contains several members including Soluble Lytic Transglycosylases (SLT)%2C Goose Egg-White Lysozymes (GEWL)%2C Hen Egg-White CDS cds-QCQ57334.1 http://www.ncbi.nlm.nih.gov/gene/?term= QCQ57345.1 36691 36936 + restriction alleviation protein restriction alleviation protein Lar%3B This family includes the restriction alleviation protein Lar encoded by the Rac prophage of Escherichia coli. This protein modu CDS cds-QCQ57345.1 http://www.ncbi.nlm.nih.gov/gene/?term= QCQ57339.1 34833 34988 - hypothetical protein CDS cds-QCQ57339.1 http://www.ncbi.nlm.nih.gov/gene/?term= QCQ57285.1 128 568 + hypothetical protein CDS cds-QCQ57285.1 http://www.ncbi.nlm.nih.gov/gene/?term= QCQ57328.1 29968 30153 + hypothetical protein CDS cds-QCQ57328.1 http://www.ncbi.nlm.nih.gov/gene/?term= QCQ57342.1 35696 35920 - hypothetical protein CDS cds-QCQ57342.1 http://www.ncbi.nlm.nih.gov/gene/?term= QCQ57313.1 22243 23796 - hypothetical protein CDS cds-QCQ57313.1 http://www.ncbi.nlm.nih.gov/gene/?term= QCQ57333.1 32976 33119 - hypothetical protein CDS cds-QCQ57333.1 http://www.ncbi.nlm.nih.gov/gene/?term= QCQ57347.1 37380 37556 + hypothetical protein CDS cds-QCQ57347.1 http://www.ncbi.nlm.nih.gov/gene/?term= QCQ57304.1 14919 15404 - replication protein A-like protein Replication protein A%2C class 2b aminoacyl-tRNA synthetases%2C and related proteins with oligonucleotide/oligosaccharide (OB) fold%3B This superfamily includes two oligonucleotide/oligosaccharide binding fold (OBF) domain families. One of these contains the OBF CDS cds-QCQ57304.1 http://www.ncbi.nlm.nih.gov/gene/?term= QCQ57287.1 866 1258 + hypothetical protein CDS cds-QCQ57287.1 http://www.ncbi.nlm.nih.gov/gene/?term= QCQ57352.1 38696 40108 + hypothetical protein CDS cds-QCQ57352.1 http://www.ncbi.nlm.nih.gov/gene/?term= QCQ57330.1 30440 31852 + hypothetical protein CDS cds-QCQ57330.1 http://www.ncbi.nlm.nih.gov/gene/?term= QCQ57327.1 29780 29968 + hypothetical protein CDS cds-QCQ57327.1 http://www.ncbi.nlm.nih.gov/gene/?term= QCQ57309.1 17658 19604 - DEAD-like helicase superfamily protein The actual alignment was detected with superfamily member COG1061 CDS cds-QCQ57309.1 http://www.ncbi.nlm.nih.gov/gene/?term= QCQ57341.1 35268 35699 - hypothetical protein CDS cds-QCQ57341.1 http://www.ncbi.nlm.nih.gov/gene/?term= QCQ57318.1 24900 25082 + hypothetical protein CDS cds-QCQ57318.1 http://www.ncbi.nlm.nih.gov/gene/?term= QCQ57319.1 25119 25352 + hypothetical protein CDS cds-QCQ57319.1 http://www.ncbi.nlm.nih.gov/gene/?term= QCQ57316.1 24534 24719 + hypothetical protein CDS cds-QCQ57316.1 http://www.ncbi.nlm.nih.gov/gene/?term= QCQ57290.1 1991 2365 + hypothetical protein CDS cds-QCQ57290.1 http://www.ncbi.nlm.nih.gov/gene/?term= QCQ57289.1 1593 1994 + putative tail-component Bacteriophage HK97-gp10%2C putative tail-component%3B This family of proteins is found in the caudovirales. It may be a tail component CDS cds-QCQ57289.1 http://www.ncbi.nlm.nih.gov/gene/?term= QCQ57311.1 20762 21715 + zinc-binding domain of primase-helicase This region represents the zinc binding domain. It is found in the N-terminal region of the bacteriophage P4 alpha protein%2C whi CDS cds-QCQ57311.1 http://www.ncbi.nlm.nih.gov/gene/?term= QCQ57296.1 4825 5118 - hypothetical protein CDS cds-QCQ57296.1 http://www.ncbi.nlm.nih.gov/gene/?term= QCQ57362.1 44486 44605 + hypothetical protein CDS cds-QCQ57362.1 http://www.ncbi.nlm.nih.gov/gene/?term= QCQ57346.1 36926 37414 + MarR family protein The Mar proteins are involved in the multiple antibiotic resistance%2C a non-specific resistance system. The expression of the ma CDS cds-QCQ57346.1 http://www.ncbi.nlm.nih.gov/gene/?term= QCQ57306.1 16088 17026 - enterobacterial exodeoxyribonuclease VIII This family consists of several Enterobacterial exodeoxyribonuclease VIII proteins. CDS cds-QCQ57306.1 http://www.ncbi.nlm.nih.gov/gene/?term= QCQ57355.1 41690 41887 + hypothetical protein CDS cds-QCQ57355.1 http://www.ncbi.nlm.nih.gov/gene/?term= QCQ57302.1 10191 12653 + hypothetical protein CDS cds-QCQ57302.1 http://www.ncbi.nlm.nih.gov/gene/?term= QCQ57297.1 5236 5943 + hypothetical protein CDS cds-QCQ57297.1 http://www.ncbi.nlm.nih.gov/gene/?term=