locus-tag class description SNE_A00020 PF13847 Methyltransferase domain SNE_A00030 PF00975 Thioesterase domain SNE_A00030 PF00550 Phosphopantetheine attachment site SNE_A00030 PF00668 Condensation domain SNE_A00030 PF13193 AMP-binding enzyme C-terminal domain SNE_A00030 PF00501 AMP-binding enzyme SNE_A00040 PF00668 Condensation domain SNE_A00040 PF00698 Acyl transferase domain SNE_A00040 PF00668 Condensation domain SNE_A00040 PF16197 Ketoacyl-synthetase C-terminal extension SNE_A00040 PF00109 Beta-ketoacyl synthase, N-terminal domain SNE_A00040 PF02801 Beta-ketoacyl synthase, C-terminal domain SNE_A00040 PF00550 Phosphopantetheine attachment site SNE_A00040 PF00109 Beta-ketoacyl synthase, N-terminal domain SNE_A00040 PF16197 Ketoacyl-synthetase C-terminal extension SNE_A00040 PF00550 Phosphopantetheine attachment site SNE_A00040 PF00698 Acyl transferase domain SNE_A00040 PF02801 Beta-ketoacyl synthase, C-terminal domain SNE_A00110 PF02086 D12 class N6 adenine-specific DNA methyltransferase SNE_A00220 PF13361 UvrD-like helicase C-terminal domain SNE_A00220 PF00580 UvrD/REP helicase N-terminal domain SNE_A00230 PF17946 RecC C-terminal domain SNE_A00240 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase SNE_A00240 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase SNE_A00300 PF07690 Major Facilitator Superfamily SNE_A00460 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain SNE_A00460 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) SNE_A00460 PF02824 TGS domain SNE_A00460 PF03129 Anticodon binding domain SNE_A00470 PF13614 AAA domain SNE_A00480 PF03677 Uncharacterised protein family (UPF0137) SNE_A00490 PF10397 Adenylosuccinate lyase C-terminus SNE_A00490 PF00206 Lyase SNE_A00510 PF07690 Major Facilitator Superfamily SNE_A00610 PF00083 Sugar (and other) transporter SNE_A00620 PF03167 Uracil DNA glycosylase superfamily SNE_A00630 PF12951 Passenger-associated-transport-repeat SNE_A00670 PF02086 D12 class N6 adenine-specific DNA methyltransferase SNE_A00680 PF00132 Bacterial transferase hexapeptide (six repeats) SNE_A00680 PF12804 MobA-like NTP transferase domain SNE_A00690 PF00348 Polyprenyl synthetase SNE_A00700 PF00154 recA bacterial DNA recombination protein SNE_A00740 PF02685 Glucokinase SNE_A00790 PF13737 Transposase DDE domain SNE_A00840 PF00155 Aminotransferase class I and II SNE_A00860 PF00005 ABC transporter SNE_A00860 PF00571 CBS domain SNE_A00870 PF00528 Binding-protein-dependent transport system inner membrane component SNE_A00920 PF14815 NUDIX domain SNE_A00920 PF00730 HhH-GPD superfamily base excision DNA repair protein SNE_A00920 PF00633 Helix-hairpin-helix motif SNE_A00940 PF00403 Heavy-metal-associated domain SNE_A00990 PF00263 Bacterial type II and III secretion system protein SNE_A00990 PF03958 Bacterial type II/III secretion system short domain SNE_A01000 PF00437 Type II/IV secretion system protein SNE_A01010 PF00482 Type II secretion system (T2SS), protein F SNE_A01040 PF07963 Prokaryotic N-terminal methylation motif SNE_A01180 PF00535 Glycosyl transferase family 2 SNE_A01220 PF00486 Transcriptional regulatory protein, C terminal SNE_A01220 PF00072 Response regulator receiver domain SNE_A01230 PF00877 NlpC/P60 family SNE_A01230 PF01476 LysM domain SNE_A01230 PF08239 Bacterial SH3 domain SNE_A01250 PF07676 WD40-like Beta Propeller Repeat SNE_A01270 PF02472 Biopolymer transport protein ExbD/TolR SNE_A01280 PF01618 MotA/TolQ/ExbB proton channel family SNE_A01290 PF01026 TatD related DNase SNE_A01370 PF00890 FAD binding domain SNE_A01370 PF02910 Fumarate reductase flavoprotein C-term SNE_A01380 PF13085 2Fe-2S iron-sulfur cluster binding domain SNE_A01380 PF13183 4Fe-4S dicluster domain SNE_A01430 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain SNE_A01430 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain SNE_A01430 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain SNE_A01440 PF01370 NAD dependent epimerase/dehydratase family SNE_A01480 PF01050 Mannose-6-phosphate isomerase SNE_A01480 PF00483 Nucleotidyl transferase SNE_A01540 PF13932 GidA associated domain SNE_A01540 PF01134 Glucose inhibited division protein A SNE_A01640 PF03796 DnaB-like helicase C terminal domain SNE_A01640 PF00772 DnaB-like helicase N terminal domain SNE_A01680 PF00293 NUDIX domain SNE_A01690 PF08439 Oligopeptidase F SNE_A01690 PF01432 Peptidase family M3 SNE_A01700 PF01119 DNA mismatch repair protein, C-terminal domain SNE_A01700 PF08676 MutL C terminal dimerisation domain SNE_A01710 PF01321 Creatinase/Prolidase N-terminal domain SNE_A01710 PF00557 Metallopeptidase family M24 SNE_A01720 PF00072 Response regulator receiver domain SNE_A01720 PF00211 Adenylate and Guanylate cyclase catalytic domain SNE_A01730 PF02537 CrcB-like protein, Camphor Resistance (CrcB) SNE_A01780 PF00512 His Kinase A (phospho-acceptor) domain SNE_A01780 PF00989 PAS fold SNE_A01780 PF16736 Single Cache-like SNE_A01780 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SNE_A01890 PF03169 OPT oligopeptide transporter protein SNE_A01960 PF00483 Nucleotidyl transferase SNE_A01980 PF04055 Radical SAM superfamily SNE_A01990 PF07992 Pyridine nucleotide-disulphide oxidoreductase SNE_A01990 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain SNE_A02070 PF07516 SecA Wing and Scaffold domain SNE_A02070 PF01043 SecA preprotein cross-linking domain SNE_A02070 PF07517 SecA DEAD-like domain SNE_A02070 PF02810 SEC-C motif SNE_A02080 PF02666 Phosphatidylserine decarboxylase SNE_A02090 PF00107 Zinc-binding dehydrogenase SNE_A02090 PF08240 Alcohol dehydrogenase GroES-like domain SNE_A02120 PF00633 Helix-hairpin-helix motif SNE_A02120 PF10576 Iron-sulfur binding domain of endonuclease III SNE_A02120 PF00730 HhH-GPD superfamily base excision DNA repair protein SNE_A02130 PF01926 50S ribosome-binding GTPase SNE_A02130 PF12631 MnmE helical domain SNE_A02130 PF10396 GTP-binding protein TrmE N-terminus SNE_A02170 PF07499 RuvA, C-terminal domain SNE_A02170 PF01330 RuvA N terminal domain SNE_A02180 PF02075 Crossover junction endodeoxyribonuclease RuvC SNE_A02210 PF01704 UTP--glucose-1-phosphate uridylyltransferase SNE_A02230 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus SNE_A02230 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus SNE_A02240 PF01256 Carbohydrate kinase SNE_A02240 PF03853 YjeF-related protein N-terminus SNE_A02270 PF00005 ABC transporter SNE_A02300 PF01370 NAD dependent epimerase/dehydratase family SNE_A02310 PF02563 Polysaccharide biosynthesis/export protein SNE_A02310 PF18412 Outer-membrane lipoprotein Wza C-terminal domain SNE_A02310 PF10531 SLBB domain SNE_A02340 PF03717 Penicillin-binding Protein dimerisation domain SNE_A02340 PF00905 Penicillin binding protein transpeptidase domain SNE_A02380 PF00318 Ribosomal protein S2 SNE_A02390 PF00889 Elongation factor TS SNE_A02400 PF00696 Amino acid kinase family SNE_A02410 PF01765 Ribosome recycling factor SNE_A02430 PF00300 Histidine phosphatase superfamily (branch 1) SNE_A02440 PF17676 LD-carboxypeptidase C-terminal domain SNE_A02440 PF02016 LD-carboxypeptidase N-terminal domain SNE_A02450 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase SNE_A02460 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain SNE_A02530 PF00171 Aldehyde dehydrogenase family SNE_A02570 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase SNE_A02580 PF04321 RmlD substrate binding domain SNE_A02590 PF16363 GDP-mannose 4,6 dehydratase SNE_A02600 PF02348 Cytidylyltransferase SNE_A02650 PF01458 Uncharacterized protein family (UPF0051) SNE_A02660 PF00005 ABC transporter SNE_A02670 PF01458 Uncharacterized protein family (UPF0051) SNE_A02680 PF00266 Aminotransferase class-V SNE_A02890 PF01313 Bacterial export proteins, family 3 SNE_A02900 PF00813 FliP family SNE_A02910 PF02108 Flagellar assembly protein FliH SNE_A02980 PF00403 Heavy-metal-associated domain SNE_A03020 PF00343 Carbohydrate phosphorylase SNE_A03040 PF01384 Phosphate transporter family SNE_A03050 PF01865 Protein of unknown function DUF47 SNE_A03060 PF00849 RNA pseudouridylate synthase SNE_A03060 PF01479 S4 domain SNE_A03070 PF00300 Histidine phosphatase superfamily (branch 1) SNE_A03080 PF00266 Aminotransferase class-V SNE_A03120 PF02632 BioY family SNE_A03160 PF03099 Biotin/lipoate A/B protein ligase family SNE_A03160 PF08279 HTH domain SNE_A03160 PF02237 Biotin protein ligase C terminal domain SNE_A03170 PF01098 Cell cycle protein SNE_A03260 PF00338 Ribosomal protein S10p/S20e SNE_A03270 PF03144 Elongation factor Tu domain 2 SNE_A03270 PF00009 Elongation factor Tu GTP binding domain SNE_A03270 PF03764 Elongation factor G, domain IV SNE_A03270 PF14492 Elongation Factor G, domain II SNE_A03270 PF00679 Elongation factor G C-terminus SNE_A03280 PF00177 Ribosomal protein S7p/S5e SNE_A03290 PF00164 Ribosomal protein S12/S23 SNE_A03310 PF11818 C-terminal domain of tail specific protease (DUF3340) SNE_A03310 PF03572 Peptidase family S41 SNE_A03310 PF17804 Tail specific protease N-terminal domain SNE_A03310 PF00595 PDZ domain SNE_A03320 PF03793 PASTA domain SNE_A03320 PF00069 Protein kinase domain SNE_A03330 PF13411 MerR HTH family regulatory protein SNE_A03330 PF07739 TipAS antibiotic-recognition domain SNE_A03340 PF00857 Isochorismatase family SNE_A03460 PF01926 50S ribosome-binding GTPase SNE_A03460 PF01018 GTP1/OBG SNE_A03470 PF01016 Ribosomal L27 protein SNE_A03480 PF00829 Ribosomal prokaryotic L21 protein SNE_A03510 PF00950 ABC 3 transport family SNE_A03520 PF00005 ABC transporter SNE_A03550 PF03477 ATP cone domain SNE_A03560 PF01258 Prokaryotic dksA/traR C4-type zinc finger SNE_A03570 PF01252 Signal peptidase (SPase) II SNE_A03600 PF01170 Putative RNA methylase family UPF0020 SNE_A03600 PF10672 S-adenosylmethionine-dependent methyltransferase SNE_A03600 PF02926 THUMP domain SNE_A03610 PF08032 RNA 2'-O ribose methyltransferase substrate binding SNE_A03610 PF00588 SpoU rRNA Methylase family SNE_A03620 PF01479 S4 domain SNE_A03620 PF00849 RNA pseudouridylate synthase SNE_A03640 PF00375 Sodium:dicarboxylate symporter family SNE_A03650 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) SNE_A03660 PF13580 SIS domain SNE_A03670 PF02606 Tetraacyldisaccharide-1-P 4'-kinase SNE_A03680 PF00375 Sodium:dicarboxylate symporter family SNE_A03690 PF02817 e3 binding domain SNE_A03690 PF00364 Biotin-requiring enzyme SNE_A03690 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) SNE_A03720 PF18324 Hypothetical protein TT1725 SNE_A03720 PF00180 Isocitrate/isopropylmalate dehydrogenase SNE_A03730 PF01380 SIS domain SNE_A03730 PF00571 CBS domain SNE_A03760 PF03600 Citrate transporter SNE_A03820 PF01063 Amino-transferase class IV SNE_A03850 PF07432 Histone H1-like protein Hc1 SNE_A03860 PF05958 tRNA (Uracil-5-)-methyltransferase SNE_A03870 PF02699 Preprotein translocase subunit SNE_A03900 PF00183 Hsp90 protein SNE_A03950 PF00209 Sodium:neurotransmitter symporter family SNE_A03970 PF00175 Oxidoreductase NAD-binding domain SNE_A03970 PF00111 2Fe-2S iron-sulfur cluster binding domain SNE_A03980 PF00795 Carbon-nitrogen hydrolase SNE_A03980 PF02540 NAD synthase SNE_A04010 PF05681 Fumarate hydratase (Fumerase) SNE_A04010 PF05683 Fumarase C-terminus SNE_A04040 PF00152 tRNA synthetases class II (D, K and N) SNE_A04050 PF08207 Elongation factor P (EF-P) KOW-like domain SNE_A04050 PF09285 Elongation factor P, C-terminal SNE_A04050 PF01132 Elongation factor P (EF-P) OB domain SNE_A04090 PF00209 Sodium:neurotransmitter symporter family SNE_A04100 PF00209 Sodium:neurotransmitter symporter family SNE_A04130 PF17757 UvrB interaction domain SNE_A04130 PF03461 TRCF domain SNE_A04130 PF00271 Helicase conserved C-terminal domain SNE_A04130 PF00270 DEAD/DEAH box helicase SNE_A04130 PF02559 CarD-like/TRCF domain SNE_A04160 PF03793 PASTA domain SNE_A04160 PF00069 Protein kinase domain SNE_A04180 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain SNE_A04180 PF01411 tRNA synthetases class II (A) SNE_A04180 PF02272 DHHA1 domain SNE_A04190 PF02780 Transketolase, C-terminal domain SNE_A04190 PF02779 Transketolase, pyrimidine binding domain SNE_A04190 PF00456 Transketolase, thiamine diphosphate binding domain SNE_A04200 PF01208 Uroporphyrinogen decarboxylase (URO-D) SNE_A04210 PF01218 Coproporphyrinogen III oxidase SNE_A04300 PF07690 Major Facilitator Superfamily SNE_A04320 PF00155 Aminotransferase class I and II SNE_A04350 PF00035 Double-stranded RNA binding motif SNE_A04350 PF14622 Ribonuclease-III-like SNE_A04360 PF18073 Rubredoxin metal binding domain SNE_A04370 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain SNE_A04380 PF01039 Carboxyl transferase domain SNE_A04380 PF17848 Acetyl-coA carboxylase zinc finger domain SNE_A04390 PF00692 dUTPase SNE_A04400 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SNE_A04400 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 SNE_A04490 PF00873 AcrB/AcrD/AcrF family SNE_A04500 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion SNE_A04520 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SNE_A04520 PF02378 Phosphotransferase system, EIIC SNE_A04520 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 SNE_A04540 PF10431 C-terminal, D2-small domain, of ClpB protein SNE_A04540 PF02861 Clp amino terminal domain, pathogenicity island component SNE_A04540 PF17871 AAA lid domain SNE_A04540 PF07724 AAA domain (Cdc48 subfamily) SNE_A04540 PF00004 ATPase family associated with various cellular activities (AAA) SNE_A04550 PF03099 Biotin/lipoate A/B protein ligase family SNE_A04620 PF03129 Anticodon binding domain SNE_A04620 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) SNE_A04620 PF09180 Prolyl-tRNA synthetase, C-terminal SNE_A04640 PF00083 Sugar (and other) transporter SNE_A04670 PF01597 Glycine cleavage H-protein SNE_A04720 PF02508 Rnf-Nqr subunit, membrane protein SNE_A04730 PF02508 Rnf-Nqr subunit, membrane protein SNE_A04740 PF04205 FMN-binding domain SNE_A04750 PF03116 NQR2, RnfD, RnfE family SNE_A04770 PF12706 Beta-lactamase superfamily domain SNE_A04850 PF11638 DnaA N-terminal domain SNE_A04850 PF08299 Bacterial dnaA protein helix-turn-helix SNE_A04850 PF00308 Bacterial dnaA protein SNE_A04860 PF07690 Major Facilitator Superfamily SNE_A04870 PF03851 UV-endonuclease UvdE SNE_A04880 PF13460 NAD(P)H-binding SNE_A04880 PF11066 Protein of unknown function (DUF2867) SNE_A04940 PF02381 MraZ protein, putative antitoxin-like SNE_A04950 PF01795 MraW methylase family SNE_A04960 PF01795 MraW methylase family SNE_A04980 PF00905 Penicillin binding protein transpeptidase domain SNE_A04980 PF03717 Penicillin-binding Protein dimerisation domain SNE_A04990 PF02875 Mur ligase family, glutamate ligase domain SNE_A04990 PF08245 Mur ligase middle domain SNE_A04990 PF01225 Mur ligase family, catalytic domain SNE_A05000 PF01520 N-acetylmuramoyl-L-alanine amidase SNE_A05030 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase SNE_A05030 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain SNE_A05050 PF03144 Elongation factor Tu domain 2 SNE_A05050 PF06421 GTP-binding protein LepA C-terminus SNE_A05050 PF00009 Elongation factor Tu GTP binding domain SNE_A05050 PF00679 Elongation factor G C-terminus SNE_A05060 PF03219 TLC ATP/ADP transporter SNE_A05100 PF10609 NUBPL iron-transfer P-loop NTPase SNE_A05100 PF01883 Iron-sulfur cluster assembly protein SNE_A05120 PF01297 Zinc-uptake complex component A periplasmic SNE_A05130 PF00005 ABC transporter SNE_A05140 PF00950 ABC 3 transport family SNE_A05140 PF02742 Iron dependent repressor, metal binding and dimerisation domain SNE_A05150 PF00950 ABC 3 transport family SNE_A05160 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase SNE_A05160 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain SNE_A05160 PF13288 DXP reductoisomerase C-terminal domain SNE_A05170 PF02163 Peptidase family M50 SNE_A05200 PF12951 Passenger-associated-transport-repeat SNE_A05230 PF00265 Thymidine kinase SNE_A05240 PF07690 Major Facilitator Superfamily SNE_A05290 PF00012 Hsp70 protein SNE_A05300 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain SNE_A05300 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase SNE_A05320 PF01915 Glycosyl hydrolase family 3 C-terminal domain SNE_A05320 PF00933 Glycosyl hydrolase family 3 N terminal domain SNE_A05330 PF00012 Hsp70 protein SNE_A05340 PF01025 GrpE SNE_A05350 PF01628 HrcA protein C terminal domain SNE_A05380 PF00403 Heavy-metal-associated domain SNE_A05400 PF02127 Aminopeptidase I zinc metalloprotease (M18) SNE_A05440 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily SNE_A05450 PF02403 Seryl-tRNA synthetase N-terminal domain SNE_A05450 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) SNE_A05460 PF03682 Uncharacterised protein family (UPF0158) SNE_A05470 PF02779 Transketolase, pyrimidine binding domain SNE_A05470 PF02780 Transketolase, C-terminal domain SNE_A05550 PF00753 Metallo-beta-lactamase superfamily SNE_A05560 PF08769 Sporulation initiation factor Spo0A C terminal SNE_A05560 PF00072 Response regulator receiver domain SNE_A05570 PF13491 4TM region of DNA translocase FtsK/SpoIIIE SNE_A05570 PF17854 FtsK alpha domain SNE_A05570 PF09397 Ftsk gamma domain SNE_A05570 PF01580 FtsK/SpoIIIE family SNE_A05580 PF13567 Domain of unknown function (DUF4131) SNE_A05580 PF00753 Metallo-beta-lactamase superfamily SNE_A05580 PF03772 Competence protein SNE_A05640 PF02603 HPr Serine kinase N terminus SNE_A05640 PF07475 HPr Serine kinase C-terminal domain SNE_A05650 PF00381 PTS HPr component phosphorylation site SNE_A05660 PF02896 PEP-utilising enzyme, TIM barrel domain SNE_A05660 PF00391 PEP-utilising enzyme, mobile domain SNE_A05660 PF05524 PEP-utilising enzyme, N-terminal SNE_A05690 PF02575 YbaB/EbfC DNA-binding family SNE_A05700 PF12169 DNA polymerase III subunits gamma and tau domain III SNE_A05720 PF01966 HD domain SNE_A05720 PF07697 7TM-HD extracellular SNE_A05720 PF07698 7TM receptor with intracellular HD hydrolase SNE_A05730 PF01661 Macro domain SNE_A05770 PF00106 short chain dehydrogenase SNE_A05780 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain SNE_A05780 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III SNE_A05780 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II SNE_A05780 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I SNE_A05870 PF00118 TCP-1/cpn60 chaperonin family SNE_A05880 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain SNE_A05880 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain SNE_A05910 PF07690 Major Facilitator Superfamily SNE_A05950 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) SNE_A05950 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 SNE_A05960 PF07690 Major Facilitator Superfamily SNE_A05990 PF01975 Survival protein SurE SNE_A06000 PF00474 Sodium:solute symporter family SNE_A06010 PF01171 PP-loop family SNE_A06020 PF02810 SEC-C motif SNE_A06020 PF07516 SecA Wing and Scaffold domain SNE_A06020 PF07517 SecA DEAD-like domain SNE_A06020 PF01043 SecA preprotein cross-linking domain SNE_A06110 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain SNE_A06110 PF17810 Arginine decarboxylase helical bundle domain SNE_A06110 PF17944 Arginine decarboxylase C-terminal helical extension SNE_A06120 PF00491 Arginase family SNE_A06130 PF01916 Deoxyhypusine synthase SNE_A06210 PF05731 TROVE domain SNE_A06240 PF04070 Domain of unknown function (DUF378) SNE_A06260 PF00132 Bacterial transferase hexapeptide (six repeats) SNE_A06260 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 SNE_A06270 PF00588 SpoU rRNA Methylase family SNE_A06300 PF01794 Ferric reductase like transmembrane component SNE_A06340 PF13416 Bacterial extracellular solute-binding protein SNE_A06350 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region SNE_A06350 PF01243 Pyridoxamine 5'-phosphate oxidase SNE_A06410 PF04055 Radical SAM superfamily SNE_A06410 PF18693 TRAM domain SNE_A06410 PF00919 Uncharacterized protein family UPF0004 SNE_A06420 PF00916 Sulfate permease family SNE_A06420 PF01740 STAS domain SNE_A06440 PF02632 BioY family SNE_A06480 PF09825 Biotin-protein ligase, N terminal SNE_A06500 PF01625 Peptide methionine sulfoxide reductase SNE_A06520 PF07681 DoxX SNE_A06530 PF13180 PDZ domain SNE_A06570 PF01432 Peptidase family M3 SNE_A06590 PF02333 Phytase SNE_A06600 PF03781 Sulfatase-modifying factor enzyme 1 SNE_A06600 PF12867 DinB superfamily SNE_A06610 PF00005 ABC transporter SNE_A06630 PF02321 Outer membrane efflux protein SNE_A06710 PF01139 tRNA-splicing ligase RtcB SNE_A06730 PF00892 EamA-like transporter family SNE_A06740 PF00923 Transaldolase/Fructose-6-phosphate aldolase SNE_A06750 PF07992 Pyridine nucleotide-disulphide oxidoreductase SNE_A06790 PF02386 Cation transport protein SNE_A06800 PF00581 Rhodanese-like domain SNE_A06800 PF00753 Metallo-beta-lactamase superfamily SNE_A06810 PF01554 MatE SNE_A06820 PF01554 MatE SNE_A06840 PF00232 Glycosyl hydrolase family 1 SNE_A06880 PF00892 EamA-like transporter family SNE_A06900 PF01702 Queuine tRNA-ribosyltransferase SNE_A06920 PF00924 Mechanosensitive ion channel SNE_A06930 PF00462 Glutaredoxin SNE_A06940 PF01722 BolA-like protein SNE_A06980 PF00551 Formyl transferase SNE_A07010 PF00056 lactate/malate dehydrogenase, NAD binding domain SNE_A07010 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain SNE_A07020 PF00285 Citrate synthase, C-terminal domain SNE_A07070 PF01266 FAD dependent oxidoreductase SNE_A07070 PF05430 S-adenosyl-L-methionine-dependent methyltransferase SNE_A07080 PF03099 Biotin/lipoate A/B protein ligase family SNE_A07080 PF12706 Beta-lactamase superfamily domain SNE_A07090 PF16360 GTP-binding GTPase Middle Region SNE_A07090 PF13167 GTP-binding GTPase N-terminal SNE_A07090 PF01926 50S ribosome-binding GTPase SNE_A07100 PF04002 RadC-like JAB domain SNE_A07110 PF01914 MarC family integral membrane protein SNE_A07120 PF00919 Uncharacterized protein family UPF0004 SNE_A07120 PF04055 Radical SAM superfamily SNE_A07160 PF03591 AzlC protein SNE_A07170 PF00781 Diacylglycerol kinase catalytic domain SNE_A07190 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) SNE_A07190 PF02806 Alpha amylase, C-terminal all-beta domain SNE_A07190 PF00128 Alpha amylase, catalytic domain SNE_A07200 PF12826 Helix-hairpin-helix motif SNE_A07200 PF03119 NAD-dependent DNA ligase C4 zinc finger domain SNE_A07200 PF01653 NAD-dependent DNA ligase adenylation domain SNE_A07200 PF03120 NAD-dependent DNA ligase OB-fold domain SNE_A07200 PF00533 BRCA1 C Terminus (BRCT) domain SNE_A07240 PF04055 Radical SAM superfamily SNE_A07240 PF01938 TRAM domain SNE_A07240 PF00919 Uncharacterized protein family UPF0004 SNE_A07260 PF00572 Ribosomal protein L13 SNE_A07270 PF00380 Ribosomal protein S9/S16 SNE_A07310 PF02074 Carboxypeptidase Taq (M32) metallopeptidase SNE_A07320 PF01569 PAP2 superfamily SNE_A07350 PF01171 PP-loop family SNE_A07360 PF17862 AAA+ lid domain SNE_A07360 PF00004 ATPase family associated with various cellular activities (AAA) SNE_A07360 PF01434 Peptidase family M41 SNE_A07490 PF01138 3' exoribonuclease family, domain 1 SNE_A07490 PF00575 S1 RNA binding domain SNE_A07490 PF00013 KH domain SNE_A07490 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain SNE_A07490 PF03725 3' exoribonuclease family, domain 2 SNE_A07500 PF00312 Ribosomal protein S15 SNE_A07510 PF14437 MafB19-like deaminase SNE_A07530 PF01197 Ribosomal protein L31 SNE_A07540 PF03462 PCRF domain SNE_A07540 PF00472 RF-1 domain SNE_A07550 PF05175 Methyltransferase small domain SNE_A07550 PF17827 PrmC N-terminal domain SNE_A07570 PF02978 Signal peptide binding domain SNE_A07570 PF00448 SRP54-type protein, GTPase domain SNE_A07570 PF02881 SRP54-type protein, helical bundle domain SNE_A07580 PF00886 Ribosomal protein S16 SNE_A07590 PF01746 tRNA (Guanine-1)-methyltransferase SNE_A07600 PF01245 Ribosomal protein L19 SNE_A07610 PF01351 Ribonuclease HII SNE_A07640 PF08340 Domain of unknown function (DUF1732) SNE_A07640 PF03755 YicC-like family, N-terminal region SNE_A07650 PF00625 Guanylate kinase SNE_A07670 PF01588 Putative tRNA binding domain SNE_A07670 PF09334 tRNA synthetases class I (M) SNE_A07670 PF08264 Anticodon-binding domain of tRNA SNE_A07690 PF13538 UvrD-like helicase C-terminal domain SNE_A07690 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain SNE_A07690 PF14490 Helix-hairpin-helix containing domain SNE_A07720 PF00583 Acetyltransferase (GNAT) family SNE_A07720 PF00795 Carbon-nitrogen hydrolase SNE_A07750 PF00364 Biotin-requiring enzyme SNE_A07750 PF00561 alpha/beta hydrolase fold SNE_A07760 PF00293 NUDIX domain SNE_A07850 PF00118 TCP-1/cpn60 chaperonin family SNE_A07860 PF00166 Chaperonin 10 Kd subunit SNE_A07870 PF04607 Region found in RelA / SpoT proteins SNE_A07870 PF02824 TGS domain SNE_A07870 PF13291 ACT domain SNE_A07880 PF08439 Oligopeptidase F SNE_A07880 PF01432 Peptidase family M3 SNE_A07890 PF00381 PTS HPr component phosphorylation site SNE_A07910 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) SNE_A07970 PF00579 tRNA synthetases class I (W and Y) SNE_A07970 PF01479 S4 domain SNE_A07980 PF00216 Bacterial DNA-binding protein SNE_A08010 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit SNE_A08020 PF00005 ABC transporter SNE_A08020 PF00664 ABC transporter transmembrane region SNE_A08080 PF11490 DNA polymerase III polC-type N-terminus II SNE_A08080 PF02811 PHP domain SNE_A08080 PF17657 Bacterial DNA polymerase III alpha subunit finger domain SNE_A08080 PF14579 Helix-hairpin-helix motif SNE_A08080 PF00929 Exonuclease SNE_A08080 PF07733 Bacterial DNA polymerase III alpha NTPase domain SNE_A08080 PF14480 DNA polymerase III polC-type N-terminus I SNE_A08100 PF00676 Dehydrogenase E1 component SNE_A08110 PF02780 Transketolase, C-terminal domain SNE_A08110 PF02779 Transketolase, pyrimidine binding domain SNE_A08110 PF00364 Biotin-requiring enzyme SNE_A08120 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) SNE_A08120 PF00364 Biotin-requiring enzyme SNE_A08120 PF02817 e3 binding domain SNE_A08150 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD SNE_A08150 PF00132 Bacterial transferase hexapeptide (six repeats) SNE_A08170 PF07244 Surface antigen variable number repeat SNE_A08170 PF01103 Surface antigen SNE_A08180 PF02132 RecR protein SNE_A08180 PF13662 Toprim domain SNE_A08220 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal SNE_A08220 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III SNE_A08230 PF00698 Acyl transferase domain SNE_A08250 PF00550 Phosphopantetheine attachment site SNE_A08270 PF07690 Major Facilitator Superfamily SNE_A08300 PF13416 Bacterial extracellular solute-binding protein SNE_A08310 PF00528 Binding-protein-dependent transport system inner membrane component SNE_A08320 PF00528 Binding-protein-dependent transport system inner membrane component SNE_A08330 PF08402 TOBE domain SNE_A08330 PF00005 ABC transporter SNE_A08340 PF07992 Pyridine nucleotide-disulphide oxidoreductase SNE_A08400 PF01648 4'-phosphopantetheinyl transferase superfamily SNE_A08430 PF02590 Predicted SPOUT methyltransferase SNE_A08440 PF01790 Prolipoprotein diacylglyceryl transferase SNE_A08520 PF00436 Single-strand binding protein family SNE_A08530 PF02789 Cytosol aminopeptidase family, N-terminal domain SNE_A08530 PF00883 Cytosol aminopeptidase family, catalytic domain SNE_A08540 PF00849 RNA pseudouridylate synthase SNE_A08550 PF00854 POT family SNE_A08560 PF01075 Glycosyltransferase family 9 (heptosyltransferase) SNE_A08570 PF07085 DRTGG domain SNE_A08570 PF01515 Phosphate acetyl/butaryl transferase SNE_A08580 PF00293 NUDIX domain SNE_A08610 PF03819 MazG nucleotide pyrophosphohydrolase domain SNE_A08610 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases SNE_A08660 PF17755 UvrA DNA-binding domain SNE_A08660 PF17760 UvrA interaction domain SNE_A08660 PF00005 ABC transporter SNE_A08670 PF00391 PEP-utilising enzyme, mobile domain SNE_A08670 PF00224 Pyruvate kinase, barrel domain SNE_A08670 PF02887 Pyruvate kinase, alpha/beta domain SNE_A08720 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain SNE_A08720 PF02896 PEP-utilising enzyme, TIM barrel domain SNE_A08720 PF00391 PEP-utilising enzyme, mobile domain SNE_A08730 PF04452 RNA methyltransferase SNE_A08750 PF13477 Glycosyl transferase 4-like SNE_A08750 PF00534 Glycosyl transferases group 1 SNE_A08770 PF02457 DisA bacterial checkpoint controller nucleotide-binding SNE_A08800 PF01654 Cytochrome bd terminal oxidase subunit I SNE_A08810 PF02322 Cytochrome bd terminal oxidase subunit II SNE_A08870 PF01513 ATP-NAD kinase SNE_A08880 PF02780 Transketolase, C-terminal domain SNE_A08880 PF02779 Transketolase, pyrimidine binding domain SNE_A08880 PF13292 1-deoxy-D-xylulose-5-phosphate synthase SNE_A08890 PF02609 Exonuclease VII small subunit SNE_A08900 PF02601 Exonuclease VII, large subunit SNE_A08900 PF13742 OB-fold nucleic acid binding domain SNE_A08910 PF00121 Triosephosphate isomerase SNE_A08920 PF03840 Preprotein translocase SecG subunit SNE_A08930 PF01327 Polypeptide deformylase SNE_A08980 PF02545 Maf-like protein SNE_A09040 PF12228 Protein of unknown function (DUF3604) SNE_A09050 PF00571 CBS domain SNE_A09050 PF03471 Transporter associated domain SNE_A09070 PF02130 Uncharacterized protein family UPF0054 SNE_A09100 PF04070 Domain of unknown function (DUF378) SNE_A09110 PF03441 FAD binding domain of DNA photolyase SNE_A09110 PF00875 DNA photolyase SNE_A09170 PF02245 Methylpurine-DNA glycosylase (MPG) SNE_A09180 PF00773 RNB domain SNE_A09180 PF08206 Ribonuclease B OB domain SNE_A09210 PF00899 ThiF family SNE_A09290 PF00005 ABC transporter SNE_A09290 PF00664 ABC transporter transmembrane region SNE_A09300 PF00664 ABC transporter transmembrane region SNE_A09300 PF00005 ABC transporter SNE_A09330 PF02424 ApbE family SNE_A09340 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain SNE_A09340 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain SNE_A09350 PF00459 Inositol monophosphatase family SNE_A09370 PF16363 GDP-mannose 4,6 dehydratase SNE_A09380 PF02397 Bacterial sugar transferase SNE_A09430 PF00348 Polyprenyl synthetase SNE_A09440 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain SNE_A09440 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain SNE_A09440 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain SNE_A09450 PF00005 ABC transporter SNE_A09460 PF12704 MacB-like periplasmic core domain SNE_A09460 PF02687 FtsX-like permease family SNE_A09470 PF00471 Ribosomal protein L33 SNE_A09480 PF00814 Glycoprotease family SNE_A09510 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase SNE_A09530 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain SNE_A09530 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain SNE_A09550 PF02445 Quinolinate synthetase A protein SNE_A09560 PF03652 Holliday junction resolvase SNE_A09570 PF00117 Glutamine amidotransferase class-I SNE_A09570 PF06418 CTP synthase N-terminus SNE_A09620 PF13635 Domain of unknown function (DUF4143) SNE_A09620 PF13173 AAA domain SNE_A09650 PF03315 Serine dehydratase beta chain SNE_A09650 PF03313 Serine dehydratase alpha chain SNE_A09660 PF00365 Phosphofructokinase SNE_A09680 PF12706 Beta-lactamase superfamily domain SNE_A09700 PF01329 Pterin 4 alpha carbinolamine dehydratase SNE_A09710 PF04551 GcpE protein SNE_A09750 PF01546 Peptidase family M20/M25/M40 SNE_A09750 PF07687 Peptidase dimerisation domain SNE_A09800 PF12002 MgsA AAA+ ATPase C terminal SNE_A09800 PF00004 ATPase family associated with various cellular activities (AAA) SNE_A09800 PF16193 AAA C-terminal domain SNE_A09810 PF13520 Amino acid permease SNE_A09830 PF12848 ABC transporter SNE_A09830 PF00005 ABC transporter SNE_A09860 PF00881 Nitroreductase family SNE_A09880 PF14748 Pyrroline-5-carboxylate reductase dimerisation SNE_A09880 PF03807 NADP oxidoreductase coenzyme F420-dependent SNE_A09900 PF02777 Iron/manganese superoxide dismutases, C-terminal domain SNE_A09900 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain SNE_A09910 PF01894 Uncharacterised protein family UPF0047 SNE_A09930 PF03481 Putative GTP-binding controlling metal-binding SNE_A09930 PF01300 Telomere recombination SNE_A09950 PF00300 Histidine phosphatase superfamily (branch 1) SNE_A10020 PF00485 Phosphoribulokinase / Uridine kinase family SNE_A10050 PF00588 SpoU rRNA Methylase family SNE_A10050 PF08032 RNA 2'-O ribose methyltransferase substrate binding SNE_A10070 PF10502 Signal peptidase, peptidase S26 SNE_A10090 PF01204 Trehalase SNE_A10140 PF01979 Amidohydrolase family SNE_A10150 PF01371 Trp repressor protein SNE_A10170 PF02885 Glycosyl transferase family, helical bundle domain SNE_A10170 PF00591 Glycosyl transferase family, a/b domain SNE_A10170 PF00117 Glutamine amidotransferase class-I SNE_A10180 PF00591 Glycosyl transferase family, a/b domain SNE_A10180 PF02885 Glycosyl transferase family, helical bundle domain SNE_A10190 PF00218 Indole-3-glycerol phosphate synthase SNE_A10200 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase SNE_A10210 PF00291 Pyridoxal-phosphate dependent enzyme SNE_A10220 PF00290 Tryptophan synthase alpha chain SNE_A10230 PF00793 DAHP synthetase I family SNE_A10230 PF18152 DAHP synthase ferredoxin-like domain SNE_A10260 PF18030 RimK PreATP-grasp domain SNE_A10260 PF08443 RimK-like ATP-grasp domain SNE_A10270 PF13230 Glutamine amidotransferases class-II SNE_A10310 PF00375 Sodium:dicarboxylate symporter family SNE_A10330 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD SNE_A10340 PF01113 Dihydrodipicolinate reductase, N-terminus SNE_A10340 PF05173 Dihydrodipicolinate reductase, C-terminus SNE_A10350 PF00701 Dihydrodipicolinate synthetase family SNE_A10360 PF02774 Semialdehyde dehydrogenase, dimerisation domain SNE_A10360 PF01118 Semialdehyde dehydrogenase, NAD binding domain SNE_A10370 PF00155 Aminotransferase class I and II SNE_A10400 PF00472 RF-1 domain SNE_A10400 PF03462 PCRF domain SNE_A10440 PF01820 D-ala D-ala ligase N-terminus SNE_A10440 PF07478 D-ala D-ala ligase C-terminus SNE_A10450 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle SNE_A10470 PF01554 MatE SNE_A10480 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle SNE_A10490 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle SNE_A10500 PF18419 ATP-grasp-like domain SNE_A10500 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain SNE_A10500 PF04262 Glutamate-cysteine ligase SNE_A10510 PF02321 Outer membrane efflux protein SNE_A10520 PF00529 HlyD membrane-fusion protein of T1SS SNE_A10520 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion SNE_A10530 PF07690 Major Facilitator Superfamily SNE_A10540 PF07690 Major Facilitator Superfamily SNE_A10550 PF03958 Bacterial type II/III secretion system short domain SNE_A10550 PF00263 Bacterial type II and III secretion system protein SNE_A10560 PF00211 Adenylate and Guanylate cyclase catalytic domain SNE_A10560 PF00069 Protein kinase domain SNE_A10570 PF00069 Protein kinase domain SNE_A10600 PF03600 Citrate transporter SNE_A10610 PF01061 ABC-2 type transporter SNE_A10620 PF00005 ABC transporter SNE_A10660 PF00156 Phosphoribosyl transferase domain SNE_A10660 PF05139 Erythromycin esterase SNE_A10700 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle SNE_A10710 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle SNE_A10740 PF07690 Major Facilitator Superfamily SNE_A10790 PF02622 Uncharacterized ACR, COG1678 SNE_A10810 PF00005 ABC transporter SNE_A10820 PF02405 Permease MlaE SNE_A10830 PF01202 Shikimate kinase SNE_A10860 PF07720 Tetratricopeptide repeat SNE_A10880 PF00202 Aminotransferase class-III SNE_A10890 PF01972 Serine dehydrogenase proteinase SNE_A10890 PF01957 NfeD-like C-terminal, partner-binding SNE_A10910 PF12127 SigmaW regulon antibacterial SNE_A10950 PF04347 Flagellar biosynthesis protein, FliO SNE_A10950 PF00813 FliP family SNE_A11000 PF07722 Peptidase C26 SNE_A11030 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases SNE_A11040 PF01641 SelR domain SNE_A11050 PF06969 HemN C-terminal domain SNE_A11050 PF04055 Radical SAM superfamily SNE_A11080 PF16870 2-oxoglutarate dehydrogenase C-terminal SNE_A11080 PF00676 Dehydrogenase E1 component SNE_A11080 PF02779 Transketolase, pyrimidine binding domain SNE_A11080 PF16078 2-oxoglutarate dehydrogenase N-terminus SNE_A11090 PF00364 Biotin-requiring enzyme SNE_A11090 PF02817 e3 binding domain SNE_A11090 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) SNE_A11100 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain SNE_A11100 PF07992 Pyridine nucleotide-disulphide oxidoreductase SNE_A11150 PF00111 2Fe-2S iron-sulfur cluster binding domain SNE_A11160 PF01521 Iron-sulphur cluster biosynthesis SNE_A11200 PF02899 Phage integrase, N-terminal SAM-like domain SNE_A11200 PF00589 Phage integrase family SNE_A11220 PF00873 AcrB/AcrD/AcrF family SNE_A11230 PF13533 Biotin-lipoyl like SNE_A11300 PF02637 GatB domain SNE_A11300 PF02934 GatB/GatE catalytic domain SNE_A11310 PF01425 Amidase SNE_A11320 PF02686 Glu-tRNAGln amidotransferase C subunit SNE_A11350 PF04070 Domain of unknown function (DUF378) SNE_A11360 PF01370 NAD dependent epimerase/dehydratase family SNE_A11360 PF08338 Domain of unknown function (DUF1731) SNE_A11390 PF05525 Branched-chain amino acid transport protein SNE_A11450 PF01042 Endoribonuclease L-PSP SNE_A11480 PF02463 RecF/RecN/SMC N terminal domain SNE_A11490 PF11858 Domain of unknown function (DUF3378) SNE_A11490 PF01351 Ribonuclease HII SNE_A11520 PF03190 Protein of unknown function, DUF255 SNE_A11530 PF00069 Protein kinase domain SNE_A11530 PF03781 Sulfatase-modifying factor enzyme 1 SNE_A11540 PF01451 Low molecular weight phosphotyrosine protein phosphatase SNE_A11560 PF02401 LytB protein SNE_A11570 PF13520 Amino acid permease SNE_A11580 PF00293 NUDIX domain SNE_A11600 PF00005 ABC transporter SNE_A11600 PF08352 Oligopeptide/dipeptide transporter, C-terminal region SNE_A11610 PF08352 Oligopeptide/dipeptide transporter, C-terminal region SNE_A11610 PF00005 ABC transporter SNE_A11620 PF12911 N-terminal TM domain of oligopeptide transport permease C SNE_A11620 PF00528 Binding-protein-dependent transport system inner membrane component SNE_A11630 PF00528 Binding-protein-dependent transport system inner membrane component SNE_A11650 PF01791 DeoC/LacD family aldolase SNE_A11670 PF00293 NUDIX domain SNE_A11690 PF00211 Adenylate and Guanylate cyclase catalytic domain SNE_A11720 PF03167 Uracil DNA glycosylase superfamily SNE_A11740 PF00849 RNA pseudouridylate synthase SNE_A11760 PF02675 S-adenosylmethionine decarboxylase SNE_A11770 PF01965 DJ-1/PfpI family SNE_A11850 PF07859 alpha/beta hydrolase fold SNE_A11870 PF01264 Chorismate synthase SNE_A11880 PF01202 Shikimate kinase SNE_A11900 PF01761 3-dehydroquinate synthase SNE_A11930 PF00793 DAHP synthetase I family SNE_A11930 PF18152 DAHP synthase ferredoxin-like domain SNE_A11940 PF01063 Amino-transferase class IV SNE_A11970 PF01817 Chorismate mutase type II SNE_A11970 PF02153 Prephenate dehydrogenase SNE_A11980 PF01488 Shikimate / quinate 5-dehydrogenase SNE_A11980 PF18317 Shikimate 5'-dehydrogenase C-terminal domain SNE_A11980 PF08501 Shikimate dehydrogenase substrate binding domain SNE_A12030 PF00939 Sodium:sulfate symporter transmembrane region SNE_A12060 PF01139 tRNA-splicing ligase RtcB SNE_A12090 PF00330 Aconitase family (aconitate hydratase) SNE_A12100 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV SNE_A12190 PF01156 Inosine-uridine preferring nucleoside hydrolase SNE_A12200 PF01925 Sulfite exporter TauE/SafE SNE_A12230 PF08534 Redoxin SNE_A12240 PF00390 Malic enzyme, N-terminal domain SNE_A12240 PF03949 Malic enzyme, NAD binding domain SNE_A12260 PF01435 Peptidase family M48 SNE_A12260 PF16491 CAAX prenyl protease N-terminal, five membrane helices SNE_A12270 PF01966 HD domain SNE_A12280 PF13520 Amino acid permease SNE_A12290 PF13520 Amino acid permease SNE_A12300 PF00478 IMP dehydrogenase / GMP reductase domain SNE_A12320 PF02661 Fic/DOC family SNE_A12320 PF13784 Fic/DOC family N-terminal SNE_A12350 PF00535 Glycosyl transferase family 2 SNE_A12440 PF13148 Protein of unknown function (DUF3987) SNE_A12520 PF00589 Phage integrase family SNE_A12530 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) SNE_A12540 PF13603 Leucyl-tRNA synthetase, Domain 2 SNE_A12540 PF08264 Anticodon-binding domain of tRNA SNE_A12540 PF09334 tRNA synthetases class I (M) SNE_A12560 PF03741 Integral membrane protein TerC family SNE_A12600 PF01668 SmpB protein SNE_A12610 PF00712 DNA polymerase III beta subunit, N-terminal domain SNE_A12610 PF02767 DNA polymerase III beta subunit, central domain SNE_A12610 PF02768 DNA polymerase III beta subunit, C-terminal domain SNE_A12620 PF13476 AAA domain SNE_A12640 PF00892 EamA-like transporter family SNE_A12650 PF00892 EamA-like transporter family SNE_A12670 PF00342 Phosphoglucose isomerase SNE_A12680 PF00005 ABC transporter SNE_A12680 PF12848 ABC transporter SNE_A12680 PF16326 ABC transporter C-terminal domain SNE_A12720 PF02390 Putative methyltransferase SNE_A12730 PF01618 MotA/TolQ/ExbB proton channel family SNE_A12780 PF01494 FAD binding domain SNE_A12790 PF03412 Peptidase C39 family SNE_A12790 PF00005 ABC transporter SNE_A12790 PF00664 ABC transporter transmembrane region SNE_A12800 PF03412 Peptidase C39 family SNE_A12800 PF00005 ABC transporter SNE_A12800 PF00664 ABC transporter transmembrane region SNE_A12840 PF01068 ATP dependent DNA ligase domain SNE_A12840 PF13298 DNA polymerase Ligase (LigD) SNE_A12840 PF04679 ATP dependent DNA ligase C terminal region SNE_A12900 PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase SNE_A12900 PF09363 XFP C-terminal domain SNE_A12900 PF09364 XFP N-terminal domain SNE_A12910 PF00690 Cation transporter/ATPase, N-terminus SNE_A12910 PF00689 Cation transporting ATPase, C-terminus SNE_A12950 PF02661 Fic/DOC family SNE_A12950 PF12728 Helix-turn-helix domain SNE_A12980 PF02777 Iron/manganese superoxide dismutases, C-terminal domain SNE_A12980 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain SNE_A13060 PF03219 TLC ATP/ADP transporter SNE_A13110 PF00209 Sodium:neurotransmitter symporter family SNE_A13130 PF13808 DDE_Tnp_1-associated SNE_A13130 PF01609 Transposase DDE domain SNE_A13140 PF13808 DDE_Tnp_1-associated SNE_A13140 PF01609 Transposase DDE domain SNE_A13160 PF00884 Sulfatase SNE_A13170 PF00717 Peptidase S24-like SNE_A13180 PF00817 impB/mucB/samB family SNE_A13180 PF13438 Domain of unknown function (DUF4113) SNE_A13180 PF11799 impB/mucB/samB family C-terminal domain SNE_A13180 PF11798 IMS family HHH motif SNE_A13190 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain SNE_A13190 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain SNE_A13250 PF03448 MgtE intracellular N domain SNE_A13250 PF01769 Divalent cation transporter SNE_A13250 PF00571 CBS domain SNE_A13270 PF01380 SIS domain SNE_A13360 PF07690 Major Facilitator Superfamily SNE_A13380 PF07690 Major Facilitator Superfamily SNE_A13390 PF01738 Dienelactone hydrolase family SNE_A13390 PF00156 Phosphoribosyl transferase domain SNE_A13480 PF03023 Lipid II flippase MurJ SNE_A13490 PF00144 Beta-lactamase SNE_A13530 PF00230 Major intrinsic protein SNE_A13540 PF02782 FGGY family of carbohydrate kinases, C-terminal domain SNE_A13540 PF00370 FGGY family of carbohydrate kinases, N-terminal domain SNE_A13550 PF03306 Alpha-acetolactate decarboxylase SNE_A13560 PF01266 FAD dependent oxidoreductase SNE_A13560 PF16901 C-terminal domain of alpha-glycerophosphate oxidase SNE_A13710 PF00106 short chain dehydrogenase SNE_A13720 PF07690 Major Facilitator Superfamily SNE_A13730 PF00762 Ferrochelatase SNE_A13750 PF00571 CBS domain SNE_A13880 PF00440 Bacterial regulatory proteins, tetR family SNE_A13880 PF08361 MAATS-type transcriptional repressor, C-terminal region SNE_A13890 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain SNE_A13890 PF01409 tRNA synthetases class II core domain (F) SNE_A13900 PF00453 Ribosomal protein L20 SNE_A13910 PF01632 Ribosomal protein L35 SNE_A13920 PF05198 Translation initiation factor IF-3, N-terminal domain SNE_A13920 PF00707 Translation initiation factor IF-3, C-terminal domain SNE_A13940 PF02910 Fumarate reductase flavoprotein C-term SNE_A13940 PF00890 FAD binding domain SNE_A13950 PF06962 Putative rRNA methylase SNE_A13970 PF08245 Mur ligase middle domain SNE_A13970 PF02875 Mur ligase family, glutamate ligase domain SNE_A13980 PF02811 PHP domain SNE_A13990 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain SNE_A13990 PF01565 FAD binding domain SNE_A14000 PF01029 NusB family SNE_A14010 PF02308 MgtC family SNE_A14020 PF00210 Ferritin-like domain SNE_A14060 PF01209 ubiE/COQ5 methyltransferase family SNE_A14080 PF09115 DNA polymerase III, delta subunit, C terminal SNE_A14090 PF02223 Thymidylate kinase SNE_A14100 PF03989 DNA gyrase C-terminal domain, beta-propeller SNE_A14100 PF00521 DNA gyrase/topoisomerase IV, subunit A SNE_A14110 PF00204 DNA gyrase B SNE_A14110 PF01751 Toprim domain SNE_A14110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SNE_A14110 PF00986 DNA gyrase B subunit, carboxyl terminus SNE_A14190 PF01209 ubiE/COQ5 methyltransferase family SNE_A14200 PF00425 chorismate binding enzyme SNE_A14210 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain SNE_A14210 PF16582 Middle domain of thiamine pyrophosphate SNE_A14210 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain SNE_A14240 PF12697 Alpha/beta hydrolase family SNE_A14250 PF00378 Enoyl-CoA hydratase/isomerase SNE_A14260 PF01040 UbiA prenyltransferase family SNE_A14270 PF13378 Enolase C-terminal domain-like SNE_A14280 PF13193 AMP-binding enzyme C-terminal domain SNE_A14280 PF00501 AMP-binding enzyme SNE_A14330 PF02096 60Kd inner membrane protein SNE_A14340 PF08299 Bacterial dnaA protein helix-turn-helix SNE_A14340 PF00308 Bacterial dnaA protein SNE_A14390 PF00128 Alpha amylase, catalytic domain SNE_A14390 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) SNE_A14440 PF00266 Aminotransferase class-V SNE_A14460 PF07859 alpha/beta hydrolase fold SNE_A14480 PF00571 CBS domain SNE_A14480 PF01595 Cyclin M transmembrane N-terminal domain SNE_A14500 PF00692 dUTPase SNE_A14510 PF17864 RuvB AAA lid domain SNE_A14510 PF05491 RuvB C-terminal winged helix domain SNE_A14510 PF05496 Holliday junction DNA helicase RuvB P-loop domain SNE_A14520 PF08486 Stage II sporulation protein SNE_A14680 PF00156 Phosphoribosyl transferase domain SNE_A14690 PF00579 tRNA synthetases class I (W and Y) SNE_A14700 PF00069 Protein kinase domain SNE_A14710 PF10458 Valyl tRNA synthetase tRNA binding arm SNE_A14710 PF08264 Anticodon-binding domain of tRNA SNE_A14710 PF00133 tRNA synthetases class I (I, L, M and V) SNE_A14730 PF00326 Prolyl oligopeptidase family SNE_A14750 PF01235 Sodium:alanine symporter family SNE_A14760 PF01235 Sodium:alanine symporter family SNE_A14780 PF00793 DAHP synthetase I family SNE_A14790 PF07690 Major Facilitator Superfamily SNE_A14810 PF00293 NUDIX domain SNE_A14840 PF00206 Lyase SNE_A14840 PF10415 Fumarase C C-terminus SNE_A14900 PF01813 ATP synthase subunit D SNE_A14910 PF02874 ATP synthase alpha/beta family, beta-barrel domain SNE_A14910 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain SNE_A14920 PF16886 ATPsynthase alpha/beta subunit N-term extension SNE_A14920 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain SNE_A14920 PF02874 ATP synthase alpha/beta family, beta-barrel domain SNE_A14930 PF10962 Protein of unknown function (DUF2764) SNE_A14940 PF06188 HrpE/YscL/FliH and V-type ATPase subunit E SNE_A15010 PF00923 Transaldolase/Fructose-6-phosphate aldolase SNE_A15020 PF00542 Ribosomal protein L7/L12 C-terminal domain SNE_A15020 PF16320 Ribosomal protein L7/L12 dimerisation domain SNE_A15040 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain SNE_A15040 PF06827 Zinc finger found in FPG and IleRS SNE_A15040 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain SNE_A15060 PF00211 Adenylate and Guanylate cyclase catalytic domain SNE_A15110 PF04997 RNA polymerase Rpb1, domain 1 SNE_A15110 PF00623 RNA polymerase Rpb1, domain 2 SNE_A15110 PF04983 RNA polymerase Rpb1, domain 3 SNE_A15110 PF05000 RNA polymerase Rpb1, domain 4 SNE_A15110 PF04998 RNA polymerase Rpb1, domain 5 SNE_A15120 PF04563 RNA polymerase beta subunit SNE_A15120 PF04561 RNA polymerase Rpb2, domain 2 SNE_A15120 PF04560 RNA polymerase Rpb2, domain 7 SNE_A15120 PF04565 RNA polymerase Rpb2, domain 3 SNE_A15120 PF00562 RNA polymerase Rpb2, domain 6 SNE_A15120 PF10385 RNA polymerase beta subunit external 1 domain SNE_A15130 PF00542 Ribosomal protein L7/L12 C-terminal domain SNE_A15130 PF16320 Ribosomal protein L7/L12 dimerisation domain SNE_A15140 PF00466 Ribosomal protein L10 SNE_A15150 PF00687 Ribosomal protein L1p/L10e family SNE_A15160 PF00298 Ribosomal protein L11, RNA binding domain SNE_A15160 PF03946 Ribosomal protein L11, N-terminal domain SNE_A15170 PF02357 Transcription termination factor nusG SNE_A15190 PF03143 Elongation factor Tu C-terminal domain SNE_A15190 PF00009 Elongation factor Tu GTP binding domain SNE_A15190 PF03144 Elongation factor Tu domain 2 SNE_A15200 PF01176 Translation initiation factor 1A / IF-1 SNE_A15250 PF01321 Creatinase/Prolidase N-terminal domain SNE_A15250 PF00557 Metallopeptidase family M24 SNE_A15270 PF01230 HIT domain SNE_A15280 PF03690 Uncharacterised protein family (UPF0160) SNE_A15320 PF03222 Tryptophan/tyrosine permease family SNE_A15400 PF07690 Major Facilitator Superfamily SNE_A15410 PF07690 Major Facilitator Superfamily SNE_A15440 PF02348 Cytidylyltransferase SNE_A15450 PF00701 Dihydrodipicolinate synthetase family SNE_A15500 PF00664 ABC transporter transmembrane region SNE_A15500 PF00005 ABC transporter SNE_A15530 PF13673 Acetyltransferase (GNAT) domain SNE_A15530 PF04229 GrpB protein SNE_A15540 PF01565 FAD binding domain SNE_A15550 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region SNE_A15550 PF00326 Prolyl oligopeptidase family SNE_A15580 PF01878 EVE domain SNE_A15660 PF00561 alpha/beta hydrolase fold SNE_A15670 PF07690 Major Facilitator Superfamily SNE_A15700 PF07992 Pyridine nucleotide-disulphide oxidoreductase SNE_A15700 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain SNE_A15700 PF00403 Heavy-metal-associated domain SNE_A15740 PF07690 Major Facilitator Superfamily SNE_A15780 PF03222 Tryptophan/tyrosine permease family SNE_A15790 PF02594 Uncharacterised ACR, YggU family COG1872 SNE_A15820 PF13533 Biotin-lipoyl like SNE_A15840 PF13173 AAA domain SNE_A15840 PF13635 Domain of unknown function (DUF4143) SNE_A15850 PF00857 Isochorismatase family SNE_A15860 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family SNE_A15860 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain SNE_A15860 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain SNE_A15950 PF10502 Signal peptidase, peptidase S26 SNE_A15990 PF02016 LD-carboxypeptidase N-terminal domain SNE_A15990 PF17676 LD-carboxypeptidase C-terminal domain SNE_A16000 PF08264 Anticodon-binding domain of tRNA SNE_A16000 PF00133 tRNA synthetases class I (I, L, M and V) SNE_A16080 PF01625 Peptide methionine sulfoxide reductase SNE_A16090 PF01641 SelR domain SNE_A16100 PF03831 PhnA domain SNE_A16100 PF08274 PhnA Zinc-Ribbon SNE_A16120 PF17755 UvrA DNA-binding domain SNE_A16120 PF00005 ABC transporter SNE_A16120 PF17760 UvrA interaction domain SNE_A16140 PF01479 S4 domain SNE_A16140 PF00849 RNA pseudouridylate synthase SNE_A16170 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily SNE_A16180 PF00440 Bacterial regulatory proteins, tetR family SNE_A16180 PF17932 Tetracyclin repressor-like, C-terminal domain SNE_A16190 PF01494 FAD binding domain SNE_A16200 PF00117 Glutamine amidotransferase class-I SNE_A16200 PF00958 GMP synthase C terminal domain SNE_A16200 PF13673 Acetyltransferase (GNAT) domain SNE_A16200 PF13302 Acetyltransferase (GNAT) domain SNE_A16200 PF03352 Methyladenine glycosylase SNE_A16210 PF12833 Helix-turn-helix domain SNE_A16210 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain SNE_A16210 PF02805 Metal binding domain of Ada SNE_A16210 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain SNE_A16230 PF00271 Helicase conserved C-terminal domain SNE_A16230 PF00270 DEAD/DEAH box helicase SNE_A16240 PF00484 Carbonic anhydrase SNE_A16250 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) SNE_A16260 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus SNE_A16260 PF00361 Proton-conducting membrane transporter SNE_A16270 PF03466 LysR substrate binding domain SNE_A16270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SNE_A16280 PF01040 UbiA prenyltransferase family SNE_A16310 PF00510 Cytochrome c oxidase subunit III SNE_A16320 PF00115 Cytochrome C and Quinol oxidase polypeptide I SNE_A16330 PF06481 COX Aromatic Rich Motif SNE_A16330 PF00116 Cytochrome C oxidase subunit II, periplasmic domain SNE_A16340 PF11208 Protein of unknown function (DUF2992) SNE_A16380 PF05721 Phytanoyl-CoA dioxygenase (PhyH) SNE_A16390 PF12146 Serine aminopeptidase, S33 SNE_A16420 PF12795 Mechanosensitive ion channel porin domain SNE_A16420 PF00924 Mechanosensitive ion channel SNE_A16420 PF12794 Mechanosensitive ion channel inner membrane domain 1 SNE_A16440 PF13411 MerR HTH family regulatory protein SNE_A16440 PF07739 TipAS antibiotic-recognition domain SNE_A16450 PF13638 PIN domain SNE_A16450 PF02562 PhoH-like protein SNE_A16520 PF02646 RmuC family SNE_A16540 PF01066 CDP-alcohol phosphatidyltransferase SNE_A16560 PF03477 ATP cone domain SNE_A16560 PF02867 Ribonucleotide reductase, barrel domain SNE_A16560 PF00317 Ribonucleotide reductase, all-alpha domain SNE_A16570 PF00268 Ribonucleotide reductase, small chain SNE_A16630 PF05193 Peptidase M16 inactive domain SNE_A16630 PF08367 Peptidase M16C associated SNE_A16630 PF00675 Insulinase (Peptidase family M16) SNE_A16640 PF13180 PDZ domain SNE_A16650 PF13180 PDZ domain SNE_A16650 PF17820 PDZ domain SNE_A16670 PF01370 NAD dependent epimerase/dehydratase family SNE_A16720 PF00676 Dehydrogenase E1 component SNE_A16730 PF02779 Transketolase, pyrimidine binding domain SNE_A16730 PF02780 Transketolase, C-terminal domain SNE_A16740 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family SNE_A16750 PF00483 Nucleotidyl transferase SNE_A16780 PF01661 Macro domain SNE_A16790 PF00571 CBS domain SNE_A16790 PF02163 Peptidase family M50 SNE_A16800 PF02629 CoA binding domain SNE_A16800 PF00549 CoA-ligase SNE_A16810 PF00549 CoA-ligase SNE_A16810 PF08442 ATP-grasp domain SNE_A16820 PF02881 SRP54-type protein, helical bundle domain SNE_A16820 PF00448 SRP54-type protein, GTPase domain SNE_A16860 PF18074 Primosomal protein N C-terminal domain SNE_A16860 PF04851 Type III restriction enzyme, res subunit SNE_A16860 PF00271 Helicase conserved C-terminal domain SNE_A16860 PF18319 PriA DNA helicase Cys-rich region (CRR) domain SNE_A16860 PF17764 3′ DNA-binding domain (3′BD) SNE_A16870 PF01734 Patatin-like phospholipase SNE_A16900 PF01336 OB-fold nucleic acid binding domain SNE_A16900 PF00152 tRNA synthetases class II (D, K and N) SNE_A16920 PF01515 Phosphate acetyl/butaryl transferase SNE_A16920 PF07085 DRTGG domain SNE_A16930 PF00871 Acetokinase family SNE_A17000 PF09190 DALR domain SNE_A17000 PF01406 tRNA synthetases class I (C) catalytic domain SNE_A17010 PF01553 Acyltransferase SNE_A17010 PF00501 AMP-binding enzyme SNE_A17070 PF02801 Beta-ketoacyl synthase, C-terminal domain SNE_A17070 PF00109 Beta-ketoacyl synthase, N-terminal domain SNE_A17090 PF01467 Cytidylyltransferase-like SNE_A17150 PF01740 STAS domain SNE_A17180 PF03091 CutA1 divalent ion tolerance protein SNE_A17200 PF08245 Mur ligase middle domain SNE_A17200 PF02875 Mur ligase family, glutamate ligase domain SNE_A17200 PF01225 Mur ligase family, catalytic domain SNE_A17210 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family SNE_A17220 PF00561 alpha/beta hydrolase fold SNE_A17240 PF07690 Major Facilitator Superfamily SNE_A17250 PF04101 Glycosyltransferase family 28 C-terminal domain SNE_A17250 PF03033 Glycosyltransferase family 28 N-terminal domain SNE_A17260 PF01098 Cell cycle protein SNE_A17280 PF08245 Mur ligase middle domain SNE_A17280 PF02875 Mur ligase family, glutamate ligase domain SNE_A17290 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 SNE_A17290 PF00953 Glycosyl transferase family 4 SNE_A17300 PF08245 Mur ligase middle domain SNE_A17300 PF01225 Mur ligase family, catalytic domain SNE_A17300 PF02875 Mur ligase family, glutamate ligase domain SNE_A17400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SNE_A17400 PF00512 His Kinase A (phospho-acceptor) domain SNE_A17400 PF18415 Histidine kinase receptor ArcB trans-membrane domain SNE_A17400 PF01627 Hpt domain SNE_A17400 PF00989 PAS fold SNE_A17400 PF00072 Response regulator receiver domain SNE_A17410 PF00483 Nucleotidyl transferase SNE_A17430 PF00289 Biotin carboxylase, N-terminal domain SNE_A17430 PF02785 Biotin carboxylase C-terminal domain SNE_A17430 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain SNE_A17440 PF00364 Biotin-requiring enzyme SNE_A17450 PF01132 Elongation factor P (EF-P) OB domain SNE_A17450 PF09285 Elongation factor P, C-terminal SNE_A17450 PF08207 Elongation factor P (EF-P) KOW-like domain SNE_A17470 PF01933 Uncharacterised protein family UPF0052 SNE_A17480 PF00834 Ribulose-phosphate 3 epimerase family SNE_A17500 PF00474 Sodium:solute symporter family SNE_A17520 PF13840 ACT domain SNE_A17520 PF01842 ACT domain SNE_A17520 PF00696 Amino acid kinase family SNE_A17550 PF00575 S1 RNA binding domain SNE_A17560 PF13184 NusA-like KH domain SNE_A17560 PF00575 S1 RNA binding domain SNE_A17560 PF08529 NusA N-terminal domain SNE_A17570 PF11987 Translation-initiation factor 2 SNE_A17570 PF04760 Translation initiation factor IF-2, N-terminal region SNE_A17570 PF00009 Elongation factor Tu GTP binding domain SNE_A17580 PF02033 Ribosome-binding factor A SNE_A17590 PF01509 TruB family pseudouridylate synthase (N terminal domain) SNE_A17590 PF16198 tRNA pseudouridylate synthase B C-terminal domain SNE_A17600 PF01687 Riboflavin kinase SNE_A17600 PF06574 FAD synthetase SNE_A17610 PF01926 50S ribosome-binding GTPase SNE_A17610 PF06071 Protein of unknown function (DUF933) SNE_A17640 PF01312 FlhB HrpN YscU SpaS Family SNE_A17650 PF00771 FHIPEP family SNE_A17690 PF02446 4-alpha-glucanotransferase SNE_A17730 PF00732 GMC oxidoreductase SNE_A17730 PF05199 GMC oxidoreductase SNE_A17740 PF01699 Sodium/calcium exchanger protein SNE_A17760 PF00004 ATPase family associated with various cellular activities (AAA) SNE_A17760 PF17871 AAA lid domain SNE_A17760 PF02861 Clp amino terminal domain, pathogenicity island component SNE_A17760 PF10431 C-terminal, D2-small domain, of ClpB protein SNE_A17760 PF07724 AAA domain (Cdc48 subfamily) SNE_A17770 PF10431 C-terminal, D2-small domain, of ClpB protein SNE_A17770 PF00004 ATPase family associated with various cellular activities (AAA) SNE_A17770 PF07724 AAA domain (Cdc48 subfamily) SNE_A17770 PF17871 AAA lid domain SNE_A17770 PF02861 Clp amino terminal domain, pathogenicity island component SNE_A17790 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain SNE_A17790 PF07992 Pyridine nucleotide-disulphide oxidoreductase SNE_A17800 PF00830 Ribosomal L28 family SNE_A17810 PF13091 PLD-like domain SNE_A17810 PF13396 Phospholipase_D-nuclease N-terminal SNE_A17830 PF13520 Amino acid permease SNE_A17880 PF02446 4-alpha-glucanotransferase SNE_A17910 PF01914 MarC family integral membrane protein SNE_A17920 PF01416 tRNA pseudouridine synthase SNE_A17930 PF00557 Metallopeptidase family M24 SNE_A17930 PF02810 SEC-C motif SNE_A17980 PF07687 Peptidase dimerisation domain SNE_A17980 PF01546 Peptidase family M20/M25/M40 SNE_A18000 PF01435 Peptidase family M48 SNE_A18030 PF01467 Cytidylyltransferase-like SNE_A18030 PF00294 pfkB family carbohydrate kinase SNE_A18040 PF01370 NAD dependent epimerase/dehydratase family SNE_A18050 PF00288 GHMP kinases N terminal domain SNE_A18060 PF03948 Ribosomal protein L9, C-terminal domain SNE_A18060 PF01281 Ribosomal protein L9, N-terminal domain SNE_A18070 PF01084 Ribosomal protein S18 SNE_A18080 PF01250 Ribosomal protein S6 SNE_A18090 PF01195 Peptidyl-tRNA hydrolase SNE_A18100 PF14693 Ribosomal protein TL5, C-terminal domain SNE_A18100 PF01386 Ribosomal L25p family SNE_A18110 PF14572 Phosphoribosyl synthetase-associated domain SNE_A18110 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase SNE_A18140 PF00534 Glycosyl transferases group 1 SNE_A18140 PF08323 Starch synthase catalytic domain SNE_A18150 PF01066 CDP-alcohol phosphatidyltransferase SNE_A18180 PF04055 Radical SAM superfamily SNE_A18190 PF05746 DALR anticodon binding domain SNE_A18190 PF02091 Glycyl-tRNA synthetase alpha subunit SNE_A18190 PF02092 Glycyl-tRNA synthetase beta subunit SNE_A18220 PF08275 DNA primase catalytic core, N-terminal domain SNE_A18220 PF01807 CHC2 zinc finger SNE_A18240 PF05188 MutS domain II SNE_A18240 PF05192 MutS domain III SNE_A18240 PF00488 MutS domain V SNE_A18240 PF05190 MutS family domain IV SNE_A18240 PF01624 MutS domain I SNE_A18280 PF01541 GIY-YIG catalytic domain SNE_A18280 PF08459 UvrC Helix-hairpin-helix N-terminal SNE_A18340 PF00253 Ribosomal protein S14p/S29e SNE_A18350 PF00444 Ribosomal protein L36 SNE_A18370 PF00825 Ribonuclease P SNE_A18380 PF13361 UvrD-like helicase C-terminal domain SNE_A18380 PF00580 UvrD/REP helicase N-terminal domain SNE_A18430 PF02810 SEC-C motif SNE_A18440 PF03222 Tryptophan/tyrosine permease family SNE_A18450 PF01743 Poly A polymerase head domain SNE_A18450 PF12626 Polymerase A arginine-rich C-terminus SNE_A18450 PF12627 Probable RNA and SrmB- binding site of polymerase A SNE_A18470 PF02684 Lipid-A-disaccharide synthetase SNE_A18470 PF07578 Lipid A Biosynthesis N-terminal domain SNE_A18530 PF02504 Fatty acid synthesis protein SNE_A18540 PF00575 S1 RNA binding domain SNE_A18540 PF10150 Ribonuclease E/G family SNE_A18680 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain SNE_A18680 PF00403 Heavy-metal-associated domain SNE_A18680 PF07992 Pyridine nucleotide-disulphide oxidoreductase SNE_A18690 PF09335 SNARE associated Golgi protein SNE_A18750 PF01709 Transcriptional regulator SNE_A18760 PF13673 Acetyltransferase (GNAT) domain SNE_A18780 PF03462 PCRF domain SNE_A18780 PF00472 RF-1 domain SNE_A18880 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase SNE_A18890 PF01416 tRNA pseudouridine synthase SNE_A18910 PF13419 Haloacid dehalogenase-like hydrolase SNE_A18930 PF02954 Bacterial regulatory protein, Fis family SNE_A18930 PF00158 Sigma-54 interaction domain SNE_A18960 PF16123 Hydroxyacylglutathione hydrolase C-terminus SNE_A18960 PF00753 Metallo-beta-lactamase superfamily SNE_A19000 PF01973 Protein of unknown function DUF115 SNE_A19020 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein SNE_A19020 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus SNE_A19090 PF11967 Recombination protein O N terminal SNE_A19090 PF02565 Recombination protein O C terminal SNE_A19100 PF00171 Aldehyde dehydrogenase family SNE_A19130 PF01476 LysM domain SNE_A19130 PF00877 NlpC/P60 family SNE_A19130 PF08239 Bacterial SH3 domain SNE_A19150 PF03484 tRNA synthetase B5 domain SNE_A19150 PF03147 Ferredoxin-fold anticodon binding domain SNE_A19150 PF01588 Putative tRNA binding domain SNE_A19150 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain SNE_A19150 PF03483 B3/4 domain SNE_A19180 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain SNE_A19180 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain SNE_A19220 PF00163 Ribosomal protein S4/S9 N-terminal domain SNE_A19220 PF01479 S4 domain SNE_A19230 PF01261 Xylose isomerase-like TIM barrel SNE_A19240 PF00152 tRNA synthetases class II (D, K and N) SNE_A19240 PF01336 OB-fold nucleic acid binding domain SNE_A19260 PF01588 Putative tRNA binding domain SNE_A19280 PF12951 Passenger-associated-transport-repeat SNE_A19280 PF00082 Subtilase family SNE_A19280 PF03797 Autotransporter beta-domain SNE_A19310 PF01488 Shikimate / quinate 5-dehydrogenase SNE_A19310 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain SNE_A19320 PF03009 Glycerophosphoryl diester phosphodiesterase family SNE_A19370 PF00849 RNA pseudouridylate synthase SNE_A19370 PF01479 S4 domain SNE_A19430 PF00793 DAHP synthetase I family SNE_A19460 PF01075 Glycosyltransferase family 9 (heptosyltransferase) SNE_A19480 PF00334 Nucleoside diphosphate kinase SNE_A19540 PF02580 D-Tyr-tRNA(Tyr) deacylase SNE_A19580 PF12419 SNF2 Helicase protein SNE_A19580 PF00271 Helicase conserved C-terminal domain SNE_A19580 PF00176 SNF2 family N-terminal domain SNE_A19590 PF05698 Bacterial trigger factor protein (TF) C-terminus SNE_A19590 PF05697 Bacterial trigger factor protein (TF) SNE_A19600 PF00574 Clp protease SNE_A19610 PF06689 ClpX C4-type zinc finger SNE_A19610 PF07724 AAA domain (Cdc48 subfamily) SNE_A19610 PF10431 C-terminal, D2-small domain, of ClpB protein SNE_A20010 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain SNE_A20010 PF02874 ATP synthase alpha/beta family, beta-barrel domain SNE_A20010 PF18269 T3SS EscN ATPase C-terminal domain SNE_A20050 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term SNE_A20060 PF00069 Protein kinase domain SNE_A20060 PF03793 PASTA domain SNE_A20150 PF01809 Putative membrane protein insertion efficiency factor SNE_A20180 PF01926 50S ribosome-binding GTPase SNE_A20180 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal SNE_A20210 PF00581 Rhodanese-like domain SNE_A20230 PF00271 Helicase conserved C-terminal domain SNE_A20230 PF04434 SWIM zinc finger SNE_A20230 PF00176 SNF2 family N-terminal domain SNE_A20240 PF01262 Alanine dehydrogenase/PNT, C-terminal domain SNE_A20240 PF05222 Alanine dehydrogenase/PNT, N-terminal domain SNE_A20250 PF01678 Diaminopimelate epimerase SNE_A20260 PF00574 Clp protease SNE_A20270 PF00464 Serine hydroxymethyltransferase SNE_A20280 PF00800 Prephenate dehydratase SNE_A20280 PF01817 Chorismate mutase type II SNE_A20280 PF01842 ACT domain SNE_A20420 PF13495 Phage integrase, N-terminal SAM-like domain SNE_A20420 PF00589 Phage integrase family SNE_A20430 PF12848 ABC transporter SNE_A20430 PF00005 ABC transporter SNE_A20490 PF00753 Metallo-beta-lactamase superfamily SNE_A20500 PF01694 Rhomboid family SNE_A20500 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease SNE_A20530 PF01467 Cytidylyltransferase-like SNE_A20530 PF00294 pfkB family carbohydrate kinase SNE_A20540 PF02190 ATP-dependent protease La (LON) substrate-binding domain SNE_A20540 PF00004 ATPase family associated with various cellular activities (AAA) SNE_A20540 PF05362 Lon protease (S16) C-terminal proteolytic domain SNE_A20550 PF00814 Glycoprotease family SNE_A20560 PF01165 Ribosomal protein S21 SNE_A20570 PF00684 DnaJ central domain SNE_A20570 PF00226 DnaJ domain SNE_A20570 PF01556 DnaJ C terminal domain SNE_A20580 PF12697 Alpha/beta hydrolase family SNE_A20590 PF00561 alpha/beta hydrolase fold SNE_A20610 PF07739 TipAS antibiotic-recognition domain SNE_A20610 PF13411 MerR HTH family regulatory protein SNE_A20620 PF02018 Carbohydrate binding domain SNE_A20620 PF00041 Fibronectin type III domain SNE_A20620 PF00704 Glycosyl hydrolases family 18 SNE_A20650 PF01244 Membrane dipeptidase (Peptidase family M19) SNE_A20660 PF04229 GrpB protein SNE_A20720 PF01467 Cytidylyltransferase-like SNE_A20720 PF00294 pfkB family carbohydrate kinase SNE_A20730 PF03055 Retinal pigment epithelial membrane protein SNE_A20780 PF00924 Mechanosensitive ion channel SNE_A20780 PF12794 Mechanosensitive ion channel inner membrane domain 1 SNE_A20780 PF12795 Mechanosensitive ion channel porin domain SNE_A20820 PF00005 ABC transporter SNE_A20860 PF13737 Transposase DDE domain SNE_A20960 PF13302 Acetyltransferase (GNAT) domain SNE_A21020 PF07731 Multicopper oxidase SNE_A21020 PF07732 Multicopper oxidase SNE_A21020 PF00394 Multicopper oxidase SNE_A21050 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain SNE_A21050 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain SNE_A21060 PF01196 Ribosomal protein L17 SNE_A21070 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain SNE_A21070 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain SNE_A21070 PF01000 RNA polymerase Rpb3/RpoA insert domain SNE_A21080 PF00411 Ribosomal protein S11 SNE_A21090 PF00416 Ribosomal protein S13/S18 SNE_A21100 PF00344 SecY translocase SNE_A21110 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A SNE_A21120 PF03719 Ribosomal protein S5, C-terminal domain SNE_A21120 PF00333 Ribosomal protein S5, N-terminal domain SNE_A21130 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast SNE_A21140 PF00347 Ribosomal protein L6 SNE_A21150 PF00410 Ribosomal protein S8 SNE_A21160 PF00281 Ribosomal protein L5 SNE_A21160 PF00673 ribosomal L5P family C-terminus SNE_A21170 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 SNE_A21180 PF00238 Ribosomal protein L14p/L23e SNE_A21190 PF00366 Ribosomal protein S17 SNE_A21200 PF00831 Ribosomal L29 protein SNE_A21210 PF00252 Ribosomal protein L16p/L10e SNE_A21220 PF00189 Ribosomal protein S3, C-terminal domain SNE_A21220 PF07650 KH domain SNE_A21230 PF00237 Ribosomal protein L22p/L17e SNE_A21240 PF00203 Ribosomal protein S19 SNE_A21250 PF00181 Ribosomal Proteins L2, RNA binding domain SNE_A21250 PF03947 Ribosomal Proteins L2, C-terminal domain SNE_A21260 PF00276 Ribosomal protein L23 SNE_A21270 PF00573 Ribosomal protein L4/L1 family SNE_A21280 PF00297 Ribosomal protein L3 SNE_A21380 PF02911 Formyl transferase, C-terminal domain SNE_A21380 PF00551 Formyl transferase SNE_A21390 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 SNE_A21390 PF00132 Bacterial transferase hexapeptide (six repeats) SNE_A21400 PF07977 FabA-like domain SNE_A21410 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase SNE_A21420 PF00795 Carbon-nitrogen hydrolase SNE_A21440 PF01189 16S rRNA methyltransferase RsmB/F SNE_A21440 PF01029 NusB family SNE_A21460 PF00398 Ribosomal RNA adenine dimethylase SNE_A21500 PF00768 D-alanyl-D-alanine carboxypeptidase SNE_A21500 PF07943 Penicillin-binding protein 5, C-terminal domain SNE_A21600 PF07733 Bacterial DNA polymerase III alpha NTPase domain SNE_A21600 PF17657 Bacterial DNA polymerase III alpha subunit finger domain SNE_A21600 PF02811 PHP domain SNE_A21600 PF14579 Helix-hairpin-helix motif SNE_A21610 PF07690 Major Facilitator Superfamily SNE_A21650 PF13393 Histidyl-tRNA synthetase SNE_A21650 PF03129 Anticodon binding domain SNE_A21660 PF02938 GAD domain SNE_A21660 PF00152 tRNA synthetases class II (D, K and N) SNE_A21660 PF01336 OB-fold nucleic acid binding domain SNE_A21670 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase SNE_A21670 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase SNE_A21690 PF00588 SpoU rRNA Methylase family SNE_A21710 PF00085 Thioredoxin SNE_A21720 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain SNE_A21720 PF04263 Thiamin pyrophosphokinase, catalytic domain SNE_A21740 PF02224 Cytidylate kinase SNE_A21760 PF01255 Putative undecaprenyl diphosphate synthase SNE_A21770 PF00709 Adenylosuccinate synthetase SNE_A21850 PF02355 Protein export membrane protein SNE_A21860 PF10141 Single-strand DNA-specific exonuclease, C terminal domain SNE_A21860 PF17768 RecJ OB domain SNE_A21860 PF02272 DHHA1 domain SNE_A21860 PF01368 DHH family SNE_A21870 PF05958 tRNA (Uracil-5-)-methyltransferase SNE_A21880 PF12728 Helix-turn-helix domain SNE_A21890 PF00595 PDZ domain SNE_A21890 PF11818 C-terminal domain of tail specific protease (DUF3340) SNE_A21890 PF03572 Peptidase family S41 SNE_A21890 PF17804 Tail specific protease N-terminal domain SNE_A21940 PF05656 Protein of unknown function (DUF805) SNE_A21950 PF00749 tRNA synthetases class I (E and Q), catalytic domain SNE_A21970 PF00667 FAD binding domain SNE_A21970 PF00258 Flavodoxin SNE_A21970 PF00175 Oxidoreductase NAD-binding domain SNE_A21980 PF02542 YgbB family SNE_A22000 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) SNE_A22020 PF04055 Radical SAM superfamily SNE_A22030 PF00750 tRNA synthetases class I (R) SNE_A22030 PF05746 DALR anticodon binding domain SNE_A22030 PF03485 Arginyl tRNA synthetase N terminal domain SNE_A22050 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase SNE_A22050 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain SNE_A22060 PF10915 Protein of unknown function (DUF2709) SNE_A22070 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE SNE_A22080 PF01926 50S ribosome-binding GTPase SNE_A22090 PF02811 PHP domain SNE_A22090 PF14579 Helix-hairpin-helix motif SNE_A22090 PF00929 Exonuclease SNE_A22090 PF07733 Bacterial DNA polymerase III alpha NTPase domain SNE_A22090 PF17657 Bacterial DNA polymerase III alpha subunit finger domain SNE_A22100 PF00162 Phosphoglycerate kinase SNE_A22110 PF03219 TLC ATP/ADP transporter SNE_A22130 PF09335 SNARE associated Golgi protein SNE_A22140 PF01066 CDP-alcohol phosphatidyltransferase SNE_A22160 PF00375 Sodium:dicarboxylate symporter family SNE_A22190 PF08496 Peptidase family S49 N-terminal SNE_A22190 PF01343 Peptidase family S49 SNE_A22200 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain SNE_A22200 PF00476 DNA polymerase family A SNE_A22200 PF01612 3'-5' exonuclease SNE_A22200 PF01367 5'-3' exonuclease, C-terminal SAM fold SNE_A22210 PF01121 Dephospho-CoA kinase SNE_A22220 PF07497 Rho termination factor, RNA-binding domain SNE_A22220 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain SNE_A22220 PF07498 Rho termination factor, N-terminal domain SNE_A22300 PF01238 Phosphomannose isomerase type I SNE_A22350 PF00480 ROK family SNE_A22370 PF01743 Poly A polymerase head domain SNE_A22370 PF12627 Probable RNA and SrmB- binding site of polymerase A SNE_A22370 PF13735 tRNA nucleotidyltransferase domain 2 putative SNE_A22460 PF00588 SpoU rRNA Methylase family SNE_A22460 PF08032 RNA 2'-O ribose methyltransferase substrate binding SNE_A22470 PF03193 RsgA GTPase SNE_A22480 PF13173 AAA domain SNE_A22480 PF13635 Domain of unknown function (DUF4143) SNE_A22490 PF00113 Enolase, C-terminal TIM barrel domain SNE_A22490 PF03952 Enolase, N-terminal domain SNE_A22560 PF10417 C-terminal domain of 1-Cys peroxiredoxin SNE_A22560 PF00578 AhpC/TSA family SNE_A22570 PF00753 Metallo-beta-lactamase superfamily SNE_A22590 PF00118 TCP-1/cpn60 chaperonin family SNE_A22610 PF07075 Protein of unknown function (DUF1343) SNE_A22620 PF00171 Aldehyde dehydrogenase family SNE_A22680 PF13361 UvrD-like helicase C-terminal domain SNE_A22680 PF00580 UvrD/REP helicase N-terminal domain SNE_A22720 PF00309 Sigma-54 factor, Activator interacting domain (AID) SNE_A22720 PF04552 Sigma-54, DNA binding domain SNE_A22720 PF04963 Sigma-54 factor, core binding domain SNE_A22780 PF01131 DNA topoisomerase SNE_A22780 PF01396 Topoisomerase DNA binding C4 zinc finger SNE_A22780 PF01751 Toprim domain SNE_A22820 PF13439 Glycosyltransferase Family 4 SNE_A22820 PF00534 Glycosyl transferases group 1 SNE_A22840 PF00676 Dehydrogenase E1 component SNE_A22850 PF02780 Transketolase, C-terminal domain SNE_A22850 PF02779 Transketolase, pyrimidine binding domain SNE_A22880 PF13635 Domain of unknown function (DUF4143) SNE_A22880 PF13173 AAA domain SNE_A22890 PF00005 ABC transporter SNE_A22900 PF01061 ABC-2 type transporter SNE_A22940 PF00271 Helicase conserved C-terminal domain SNE_A22940 PF12344 Ultra-violet resistance protein B SNE_A22940 PF04851 Type III restriction enzyme, res subunit SNE_A22940 PF17757 UvrB interaction domain SNE_A22940 PF02151 UvrB/uvrC motif SNE_A22950 PF03222 Tryptophan/tyrosine permease family SNE_A22980 PF03222 Tryptophan/tyrosine permease family SNE_A22990 PF02511 Thymidylate synthase complementing protein SNE_A23010 PF00490 Delta-aminolevulinic acid dehydratase SNE_A23020 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase SNE_A23030 PF06082 Exopolysaccharide biosynthesis protein YbjH SNE_A23090 PF11973 NQRA C-terminal domain SNE_A23090 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) SNE_A23100 PF13737 Transposase DDE domain SNE_A23130 PF03449 Transcription elongation factor, N-terminal SNE_A23130 PF01272 Transcription elongation factor, GreA/GreB, C-term SNE_A23140 PF01725 Ham1 family SNE_A23170 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle SNE_A23250 PF18029 Glyoxalase-like domain SNE_A23250 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily SNE_A23270 PF01812 5-formyltetrahydrofolate cyclo-ligase family SNE_A23310 PF02325 YGGT family SNE_A23320 PF01207 Dihydrouridine synthase (Dus) SNE_A23330 PF00708 Acylphosphatase SNE_A23430 PF04199 Putative cyclase SNE_A23480 PF04542 Sigma-70 region 2 SNE_A23480 PF00140 Sigma-70 factor, region 1.2 SNE_A23480 PF04545 Sigma-70, region 4 SNE_A23480 PF04539 Sigma-70 region 3 SNE_A23480 PF03979 Sigma-70 factor, region 1.1 SNE_A23510 PF01649 Ribosomal protein S20 SNE_A23600 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family SNE_A23610 PF13538 UvrD-like helicase C-terminal domain SNE_A23680 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD SNE_A23720 PF03527 RHS protein SNE_A23770 PF09820 Predicted AAA-ATPase SNE_A23770 PF08011 PD-(D/E)XK nuclease superfamily SNE_A23810 PF00072 Response regulator receiver domain SNE_A23810 PF00196 Bacterial regulatory proteins, luxR family SNE_B24020 PF10008 Uncharacterized protein conserved in bacteria (DUF2251) SNE_B24050 PF00589 Phage integrase family SNE_B24070 PF00589 Phage integrase family SNE_B24120 PF13737 Transposase DDE domain SNE_B24200 PF00239 Resolvase, N terminal domain SNE_B24200 PF02796 Helix-turn-helix domain of resolvase SNE_B24240 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) SNE_B24280 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain SNE_B24280 PF14490 Helix-hairpin-helix containing domain SNE_B24280 PF13538 UvrD-like helicase C-terminal domain SNE_B24350 PF09820 Predicted AAA-ATPase SNE_B24350 PF08011 PD-(D/E)XK nuclease superfamily SNE_B24370 PF00690 Cation transporter/ATPase, N-terminus SNE_B24370 PF00689 Cation transporting ATPase, C-terminus SNE_B24390 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion SNE_B24390 PF00529 HlyD membrane-fusion protein of T1SS SNE_B24400 PF00873 AcrB/AcrD/AcrF family SNE_B24410 PF11897 Protein of unknown function (DUF3417) SNE_B24410 PF00343 Carbohydrate phosphorylase SNE_B24430 PF07992 Pyridine nucleotide-disulphide oxidoreductase SNE_B24430 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain SNE_B24430 PF00403 Heavy-metal-associated domain SNE_B24440 PF13411 MerR HTH family regulatory protein SNE_B24460 PF01209 ubiE/COQ5 methyltransferase family SNE_B24510 PF00394 Multicopper oxidase SNE_B24510 PF07731 Multicopper oxidase SNE_B24510 PF07732 Multicopper oxidase SNE_B24520 PF00239 Resolvase, N terminal domain SNE_B24520 PF02796 Helix-turn-helix domain of resolvase SNE_B24530 PF13700 Domain of unknown function (DUF4158) SNE_B24530 PF01526 Tn3 transposase DDE domain SNE_B24550 PF13700 Domain of unknown function (DUF4158) SNE_B24550 PF01526 Tn3 transposase DDE domain SNE_B24570 PF00239 Resolvase, N terminal domain SNE_B24570 PF02796 Helix-turn-helix domain of resolvase SNE_B24670 PF06986 Type-1V conjugative transfer system mating pair stabilisation SNE_B24700 PF06834 TraU protein SNE_B24790 PF05309 TraE protein SNE_B24870 PF00216 Bacterial DNA-binding protein SNE_B24910 PF09820 Predicted AAA-ATPase SNE_B24910 PF08011 PD-(D/E)XK nuclease superfamily SNE_B24960 PF00772 DnaB-like helicase N terminal domain SNE_B24960 PF03796 DnaB-like helicase C terminal domain SNE_B24970 PF13614 AAA domain SNE_B25030 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase SNE_B25030 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase SNE_B25040 PF08241 Methyltransferase domain SNE_B25100 PF00027 Cyclic nucleotide-binding domain