SHELI_v1c00020	PF00712	DNA polymerase III beta subunit, N-terminal domain
SHELI_v1c00020	PF02767	DNA polymerase III beta subunit, central domain
SHELI_v1c00020	PF02768	DNA polymerase III beta subunit, C-terminal domain
SHELI_v1c00040	PF00521	DNA gyrase/topoisomerase IV, subunit A
SHELI_v1c00040	PF03989	DNA gyrase C-terminal domain, beta-propeller
SHELI_v1c00060	PF14437	SHELI_v1c00060
SHELI_v1c00080	PF13662	Toprim domain
SHELI_v1c00110	PF13847	Methyltransferase domain
SHELI_v1c00140	PF01430	Hsp33 protein
SHELI_v1c00230	PF01084	Ribosomal protein S18
SHELI_v1c00240	PF01281	Ribosomal protein L9, N-terminal domain
SHELI_v1c00240	PF03948	Ribosomal protein L9, C-terminal domain
SHELI_v1c00330	PF00471	Ribosomal protein L33
SHELI_v1c00390	PF00298	Ribosomal protein L11, RNA binding domain
SHELI_v1c00390	PF03946	Ribosomal protein L11, N-terminal domain
SHELI_v1c00470	PF00466	Ribosomal protein L10
SHELI_v1c00480	PF00542	Ribosomal protein L7/L12 C-terminal domain
SHELI_v1c00480	PF16320	SHELI_v1c00480
SHELI_v1c00510	PF06723	MreB/Mbl protein
SHELI_v1c00580	PF02502	Ribose/Galactose Isomerase
SHELI_v1c00680	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
SHELI_v1c00680	PF02874	ATP synthase alpha/beta family, beta-barrel domain
SHELI_v1c00690	PF02823	ATP synthase, Delta/Epsilon chain, beta-sandwich domain
SHELI_v1c00740	PF01205	Uncharacterized protein family UPF0029
SHELI_v1c00800	PF02603	HPr Serine kinase N terminus
SHELI_v1c00800	PF07475	HPr Serine kinase C-terminal domain
SHELI_v1c00820	PF07992	Pyridine nucleotide-disulphide oxidoreductase
SHELI_v1c00850	PF01381	Helix-turn-helix
SHELI_v1c00980	PF01048	Phosphorylase superfamily
SHELI_v1c00990	PF00814	Glycoprotease family
SHELI_v1c01070	PF00381	PTS HPr component phosphorylation site
SHELI_v1c01140	PF00358	phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
SHELI_v1c01200	PF02686	Glu-tRNAGln amidotransferase C subunit
SHELI_v1c01230	PF02080	TrkA-C domain
SHELI_v1c01230	PF02254	TrkA-N domain
SHELI_v1c01650	PF00814	Glycoprotease family
SHELI_v1c01720	PF13673	Acetyltransferase (GNAT) domain
SHELI_v1c01870	PF03652	Uncharacterised protein family (UPF0081)
SHELI_v1c02040	PF00707	Translation initiation factor IF-3, C-terminal domain
SHELI_v1c02040	PF05198	Translation initiation factor IF-3, N-terminal domain
SHELI_v1c02050	PF01632	Ribosomal protein L35
SHELI_v1c02100	PF01513	ATP-NAD kinase
SHELI_v1c02120	PF00581	Rhodanese-like domain
SHELI_v1c02180	PF01272	Transcription elongation factor, GreA/GreB, C-term
SHELI_v1c02180	PF03449	Transcription elongation factor, N-terminal
SHELI_v1c02230	PF00590	Tetrapyrrole (Corrin/Porphyrin) Methylases
SHELI_v1c02250	PF00829	Ribosomal prokaryotic L21 protein
SHELI_v1c02260	PF04327	Protein of unknown function (DUF464)
SHELI_v1c02270	PF01016	Ribosomal L27 protein
SHELI_v1c02300	PF03807	NADP oxidoreductase coenzyme F420-dependent
SHELI_v1c02300	PF14748	Pyrroline-5-carboxylate reductase dimerisation
SHELI_v1c02360	PF01765	Ribosome recycling factor
SHELI_v1c02420	PF04079	Putative transcriptional regulators (Ypuh-like)
SHELI_v1c02430	PF00849	RNA pseudouridylate synthase
SHELI_v1c02430	PF01479	S4 domain
SHELI_v1c02450	PF01709	Transcriptional regulator
SHELI_v1c02540	PF06723	MreB/Mbl protein
SHELI_v1c02570	PF02224	Cytidylate kinase
SHELI_v1c02590	PF01210	NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus
SHELI_v1c02590	PF07479	NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus
SHELI_v1c02600	PF00216	Bacterial DNA-binding protein
SHELI_v1c02620	PF03838	Recombination protein U
SHELI_v1c02630	PF05103	DivIVA protein
SHELI_v1c02640	PF02464	Competence-damaged protein
SHELI_v1c02750	PF00448	SRP54-type protein, GTPase domain
SHELI_v1c02750	PF02881	SRP54-type protein, helical bundle domain
SHELI_v1c02750	PF02978	Signal peptide binding domain
SHELI_v1c02780	PF02590	Predicted SPOUT methyltransferase
SHELI_v1c02930	PF01245	Ribosomal protein L19
SHELI_v1c03070	PF01025	GrpE
SHELI_v1c03100	PF00226	DnaJ domain
SHELI_v1c03100	PF00684	DnaJ central domain
SHELI_v1c03100	PF01556	DnaJ C terminal domain
SHELI_v1c03290	PF01965	DJ-1/PfpI family
SHELI_v1c03340	PF01248	Ribosomal protein L7Ae/L30e/S12e/Gadd45 family
SHELI_v1c03360	PF02033	Ribosome-binding factor A
SHELI_v1c03520	PF00312	Ribosomal protein S15
SHELI_v1c03950	PF00156	Phosphoribosyl transferase domain
SHELI_v1c04510	PF13411	MerR HTH family regulatory protein
SHELI_v1c04790	PF00005	ABC transporter
SHELI_v1c04820	PF00005	ABC transporter
SHELI_v1c04830	PF00005	ABC transporter
SHELI_v1c04890	PF00005	ABC transporter
SHELI_v1c04930	PF00455	SHELI_v1c04930
SHELI_v1c04930	PF08220	DeoR-like helix-turn-helix domain
SHELI_v1c05670	PF02609	Exonuclease VII small subunit
SHELI_v1c05780	PF00753	Metallo-beta-lactamase superfamily
SHELI_v1c05820	PF05979	Bacterial protein of unknown function (DUF896)
SHELI_v1c05960	PF05491	Holliday junction DNA helicase ruvB C-terminus
SHELI_v1c05960	PF05496	Holliday junction DNA helicase ruvB N-terminus
SHELI_v1c05990	PF01165	Ribosomal protein S21
SHELI_v1c06050	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
SHELI_v1c06140	PF00485	Phosphoribulokinase / Uridine kinase family
SHELI_v1c06190	PF02810	SEC-C motif
SHELI_v1c06330	PF00455	SHELI_v1c06330
SHELI_v1c06330	PF08220	DeoR-like helix-turn-helix domain
SHELI_v1c06370	PF00464	Serine hydroxymethyltransferase
SHELI_v1c06400	PF00575	S1 RNA binding domain
SHELI_v1c06600	PF08282	haloacid dehalogenase-like hydrolase
SHELI_v1c06680	PF02565	Recombination protein O C terminal
SHELI_v1c06680	PF11967	Recombination protein O N terminal
SHELI_v1c06730	PF00383	Cytidine and deoxycytidylate deaminase zinc-binding region
SHELI_v1c06860	PF00471	Ribosomal protein L33
SHELI_v1c06990	PF01648	4'-phosphopantetheinyl transferase superfamily
SHELI_v1c07010	PF01351	Ribonuclease HII
SHELI_v1c07010	PF11858	Domain of unknown function (DUF3378)
SHELI_v1c07050	PF00849	RNA pseudouridylate synthase
SHELI_v1c07200	PF02381	MraZ protein
SHELI_v1c07220	PF01783	Ribosomal L32p protein family
SHELI_v1c07330	PF00588	SpoU rRNA Methylase family
SHELI_v1c07330	PF08032	RNA 2'-O ribose methyltransferase substrate binding
SHELI_v1c07380	PF00575	S1 RNA binding domain
SHELI_v1c07390	PF01106	NifU-like domain
SHELI_v1c07440	PF01458	Uncharacterized protein family (UPF0051)
SHELI_v1c07550	PF04297	Putative helix-turn-helix protein, YlxM / p13 like
SHELI_v1c07650	PF00753	Metallo-beta-lactamase superfamily
SHELI_v1c07700	PF03780	SHELI_v1c07700
SHELI_v1c07750	PF04263	Thiamin pyrophosphokinase, catalytic domain
SHELI_v1c07750	PF04265	Thiamin pyrophosphokinase, vitamin B1 binding domain
SHELI_v1c07830	PF03602	Conserved hypothetical protein 95
SHELI_v1c07990	PF02568	Thiamine biosynthesis protein (ThiI)
SHELI_v1c07990	PF02926	THUMP domain
SHELI_v1c08120	PF01588	Putative tRNA binding domain
SHELI_v1c08150	PF01475	Ferric uptake regulator family
SHELI_v1c08160	PF00550	Phosphopantetheine attachment site
SHELI_v1c08250	PF01515	Phosphate acetyl/butaryl transferase
SHELI_v1c08260	PF01467	Cytidylyltransferase
SHELI_v1c08290	PF01228	Glycine radical
SHELI_v1c08320	PF00380	Ribosomal protein S9/S16
SHELI_v1c08480	PF01000	RNA polymerase Rpb3/RpoA insert domain
SHELI_v1c08480	PF01193	RNA polymerase Rpb3/Rpb11 dimerisation domain
SHELI_v1c08480	PF03118	Bacterial RNA polymerase, alpha chain C terminal domain
SHELI_v1c08500	PF00416	Ribosomal protein S13/S18
SHELI_v1c08510	PF00444	Ribosomal protein L36
SHELI_v1c08520	PF01176	Translation initiation factor 1A / IF-1
SHELI_v1c08560	PF00828	Ribosomal protein L18e/L15
SHELI_v1c08570	PF00333	Ribosomal protein S5, N-terminal domain
SHELI_v1c08570	PF03719	Ribosomal protein S5, C-terminal domain
SHELI_v1c08580	PF00861	Ribosomal L18p/L5e family
SHELI_v1c08590	PF00347	Ribosomal protein L6
SHELI_v1c08620	PF00281	Ribosomal protein L5
SHELI_v1c08620	PF00673	ribosomal L5P family C-terminus
SHELI_v1c08640	PF00238	Ribosomal protein L14p/L23e
SHELI_v1c08650	PF00366	Ribosomal protein S17
SHELI_v1c08660	PF00831	Ribosomal L29 protein
SHELI_v1c08690	PF00237	Ribosomal protein L22p/L17e
SHELI_v1c08720	PF00276	Ribosomal protein L23
SHELI_v1c08740	PF00297	Ribosomal protein L3
SHELI_v1c08750	PF00338	Ribosomal protein S10p/S20e
SHELI_v1c08860	PF00005	ABC transporter
SHELI_v1c08880	PF01048	Phosphorylase superfamily
SHELI_v1c09290	PF00455	SHELI_v1c09290
SHELI_v1c09290	PF08220	DeoR-like helix-turn-helix domain
SHELI_v1c09420	PF01936	NYN domain
SHELI_v1c09480	PF09827	CRISPR associated protein Cas2
SHELI_v1c09560	PF00294	pfkB family carbohydrate kinase
SHELI_v1c09590	PF00005	ABC transporter
SHELI_v1c09600	PF05025	RbsD / FucU transport protein family
SHELI_v1c10190	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
SHELI_v1c10220	PF01418	Helix-turn-helix domain, rpiR family
SHELI_v1c10430	PF01874	ATP:dephospho-CoA triphosphoribosyl transferase
SHELI_v1c10690	PF00198	2-oxoacid dehydrogenases acyltransferase (catalytic domain)
SHELI_v1c10690	PF00364	Biotin-requiring enzyme
SHELI_v1c10690	PF02817	e3 binding domain
SHELI_v1c10730	PF08282	haloacid dehalogenase-like hydrolase
SHELI_v1c10990	PF01300	Telomere recombination
SHELI_v1c11060	PF01197	Ribosomal protein L31
SHELI_v1c11120	PF00403	Heavy-metal-associated domain
SHELI_v1c11140	PF01527	Transposase
SHELI_v1c11200	PF02542	YgbB family
SHELI_v1c11240	PF02195	ParB-like nuclease domain
SHELI_v1c11250	PF13614	AAA domain
SHELI_v1c11320	PF00156	Phosphoribosyl transferase domain
SHELI_v1c11350	PF01195	Peptidyl-tRNA hydrolase
SHELI_v1c11360	PF13793	N-terminal domain of ribose phosphate pyrophosphokinase
SHELI_v1c11360	PF14572	Phosphoribosyl synthetase-associated domain
SHELI_v1c11410	PF00398	Ribosomal RNA adenine dimethylase
SHELI_v1c11440	PF06723	MreB/Mbl protein
SHELI_v1c11580	PF00825	Ribonuclease P