SHELI_v1c07330 68ac769cee7d74bb32d89316cac6561e 246 SMART SM00967 32 96 4.2E-8 T 12-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 SHELI_v1c07330 68ac769cee7d74bb32d89316cac6561e 246 SUPERFAMILY SSF75217 100 243 1.57E-34 T 12-10-2018 IPR029028 Alpha/beta knot methyltransferases SHELI_v1c07330 68ac769cee7d74bb32d89316cac6561e 246 SUPERFAMILY SSF55315 4 92 1.18E-13 T 12-10-2018 IPR029064 50S ribosomal protein L30e-like SHELI_v1c07330 68ac769cee7d74bb32d89316cac6561e 246 Gene3D G3DSA:3.30.1330.30 3 92 6.5E-13 T 12-10-2018 IPR029064 50S ribosomal protein L30e-like SHELI_v1c07330 68ac769cee7d74bb32d89316cac6561e 246 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 32 91 6.1E-7 T 12-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 SHELI_v1c07330 68ac769cee7d74bb32d89316cac6561e 246 Gene3D G3DSA:3.40.1280.10 93 246 5.6E-41 T 12-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal SHELI_v1c07330 68ac769cee7d74bb32d89316cac6561e 246 Pfam PF00588 SpoU rRNA Methylase family 102 240 9.4E-33 T 12-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 SHELI_v1c08150 caae52acf5b0df3799ce6d9ee35c027c 144 Pfam PF01475 Ferric uptake regulator family 16 135 9.8E-16 T 12-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 SHELI_v1c08150 caae52acf5b0df3799ce6d9ee35c027c 144 Gene3D G3DSA:3.30.1490.190 90 144 8.6E-10 T 12-10-2018 SHELI_v1c08150 caae52acf5b0df3799ce6d9ee35c027c 144 SUPERFAMILY SSF46785 8 141 7.03E-24 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily SHELI_v1c08150 caae52acf5b0df3799ce6d9ee35c027c 144 Gene3D G3DSA:1.10.10.10 2 86 2.1E-13 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily SHELI_v1c00060 52f7176a43d7cddada4085a18b5f049c 142 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 51 88 - T 12-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 SHELI_v1c00060 52f7176a43d7cddada4085a18b5f049c 142 Pfam PF14437 MafB19-like deaminase 9 139 1.9E-20 T 12-10-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 SHELI_v1c00060 52f7176a43d7cddada4085a18b5f049c 142 Gene3D G3DSA:3.40.140.10 3 142 1.4E-28 T 12-10-2018 SHELI_v1c00060 52f7176a43d7cddada4085a18b5f049c 142 SUPERFAMILY SSF53927 14 140 4.02E-24 T 12-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 SHELI_v1c02540 e0ff99776de59b23835bff901fb9a15f 343 Gene3D G3DSA:3.90.640.10 180 253 2.1E-101 T 12-10-2018 SHELI_v1c02540 e0ff99776de59b23835bff901fb9a15f 343 SUPERFAMILY SSF53067 7 142 5.46E-26 T 12-10-2018 SHELI_v1c02540 e0ff99776de59b23835bff901fb9a15f 343 SUPERFAMILY SSF53067 144 322 1.39E-36 T 12-10-2018 SHELI_v1c02540 e0ff99776de59b23835bff901fb9a15f 343 Gene3D G3DSA:3.30.420.40 148 311 2.1E-101 T 12-10-2018 SHELI_v1c02540 e0ff99776de59b23835bff901fb9a15f 343 Gene3D G3DSA:3.30.420.40 10 318 2.1E-101 T 12-10-2018 SHELI_v1c02540 e0ff99776de59b23835bff901fb9a15f 343 Pfam PF06723 MreB/Mbl protein 7 327 3.9E-122 T 12-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 SHELI_v1c02540 e0ff99776de59b23835bff901fb9a15f 343 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 43 61 1.3E-27 T 12-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 SHELI_v1c02540 e0ff99776de59b23835bff901fb9a15f 343 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 294 320 1.3E-27 T 12-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 SHELI_v1c02540 e0ff99776de59b23835bff901fb9a15f 343 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 63 86 1.3E-27 T 12-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 SHELI_v1c02540 e0ff99776de59b23835bff901fb9a15f 343 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 181 201 1.3E-27 T 12-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 SHELI_v1c02540 e0ff99776de59b23835bff901fb9a15f 343 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 126 145 1.3E-27 T 12-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 SHELI_v1c05820 4c09b176d204971952352a30edddd42f 74 Pfam PF05979 Bacterial protein of unknown function (DUF896) 3 66 4.9E-24 T 12-10-2018 IPR009242 Protein of unknown function DUF896 SHELI_v1c05820 4c09b176d204971952352a30edddd42f 74 Hamap MF_01103 UPF0291 protein . 1 58 12.868 T 12-10-2018 IPR009242 Protein of unknown function DUF896 SHELI_v1c05820 4c09b176d204971952352a30edddd42f 74 Gene3D G3DSA:1.10.287.540 1 57 6.4E-15 T 12-10-2018 SHELI_v1c05820 4c09b176d204971952352a30edddd42f 74 SUPERFAMILY SSF158221 1 40 6.28E-10 T 12-10-2018 SHELI_v1c11440 fc4e4f78d077d84df8e3eaaa290fb827 348 Pfam PF06723 MreB/Mbl protein 10 324 1.1E-76 T 12-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 SHELI_v1c11440 fc4e4f78d077d84df8e3eaaa290fb827 348 SUPERFAMILY SSF53067 149 323 7.66E-28 T 12-10-2018 SHELI_v1c11440 fc4e4f78d077d84df8e3eaaa290fb827 348 Gene3D G3DSA:3.90.640.10 182 255 2.0E-72 T 12-10-2018 SHELI_v1c11440 fc4e4f78d077d84df8e3eaaa290fb827 348 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 47 65 3.7E-12 T 12-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 SHELI_v1c11440 fc4e4f78d077d84df8e3eaaa290fb827 348 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 67 90 3.7E-12 T 12-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 SHELI_v1c11440 fc4e4f78d077d84df8e3eaaa290fb827 348 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 128 147 3.7E-12 T 12-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 SHELI_v1c11440 fc4e4f78d077d84df8e3eaaa290fb827 348 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 183 203 3.7E-12 T 12-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 SHELI_v1c11440 fc4e4f78d077d84df8e3eaaa290fb827 348 Gene3D G3DSA:3.30.420.40 150 313 2.0E-72 T 12-10-2018 SHELI_v1c11440 fc4e4f78d077d84df8e3eaaa290fb827 348 Gene3D G3DSA:3.30.420.40 12 320 2.0E-72 T 12-10-2018 SHELI_v1c11440 fc4e4f78d077d84df8e3eaaa290fb827 348 SUPERFAMILY SSF53067 10 144 1.3E-14 T 12-10-2018 SHELI_v1c10730 9ae614514efd39696e7568754a2bf5e3 290 ProSitePatterns PS01229 Hypothetical cof family signature 2. 234 256 - T 12-10-2018 SHELI_v1c10730 9ae614514efd39696e7568754a2bf5e3 290 Pfam PF08282 haloacid dehalogenase-like hydrolase 12 281 1.1E-47 T 12-10-2018 SHELI_v1c10730 9ae614514efd39696e7568754a2bf5e3 290 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 11 253 9.7E-21 T 12-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 SHELI_v1c10730 9ae614514efd39696e7568754a2bf5e3 290 Gene3D G3DSA:3.40.50.1000 10 278 4.6E-48 T 12-10-2018 IPR023214 HAD superfamily SHELI_v1c10730 9ae614514efd39696e7568754a2bf5e3 290 Gene3D G3DSA:3.30.1240.10 92 210 4.6E-48 T 12-10-2018 SHELI_v1c10730 9ae614514efd39696e7568754a2bf5e3 290 SUPERFAMILY SSF56784 4 285 1.09E-50 T 12-10-2018 IPR036412 HAD-like superfamily SHELI_v1c05960 8c095e02671b198b23f26e6a6d7633f2 316 ProDom PD005323 DNA HELICASE HOLLIDAY JUNCTION RUVB NUCLEOTIDE-BINDING ATP-BINDING SOS RECOMBINATION RESPONSE 241 310 1.0E-9 T 12-10-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 SHELI_v1c05960 8c095e02671b198b23f26e6a6d7633f2 316 Gene3D G3DSA:3.40.50.300 8 169 6.5E-40 T 12-10-2018 SHELI_v1c05960 8c095e02671b198b23f26e6a6d7633f2 316 SUPERFAMILY SSF46785 245 311 1.81E-8 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily SHELI_v1c05960 8c095e02671b198b23f26e6a6d7633f2 316 TIGRFAM TIGR00635 ruvB: Holliday junction DNA helicase RuvB 12 311 6.8E-92 T 12-10-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 SHELI_v1c05960 8c095e02671b198b23f26e6a6d7633f2 316 Gene3D G3DSA:1.10.10.10 245 315 7.0E-12 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily SHELI_v1c05960 8c095e02671b198b23f26e6a6d7633f2 316 SUPERFAMILY SSF52540 7 238 5.95E-51 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHELI_v1c05960 8c095e02671b198b23f26e6a6d7633f2 316 Pfam PF05491 Holliday junction DNA helicase ruvB C-terminus 241 311 5.0E-16 T 12-10-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 SHELI_v1c05960 8c095e02671b198b23f26e6a6d7633f2 316 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 8 222 1.3E-66 T 12-10-2018 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 SHELI_v1c05960 8c095e02671b198b23f26e6a6d7633f2 316 SMART SM00382 39 170 2.8E-8 T 12-10-2018 IPR003593 AAA+ ATPase domain SHELI_v1c05960 8c095e02671b198b23f26e6a6d7633f2 316 Hamap MF_00016 Holliday junction ATP-dependent DNA helicase RuvB [ruvB]. 1 316 74.829 T 12-10-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 SHELI_v1c05960 8c095e02671b198b23f26e6a6d7633f2 316 Gene3D G3DSA:1.10.8.60 170 243 6.4E-13 T 12-10-2018 SHELI_v1c09480 a775aa7cfdb7db38afa550fe27e038f9 102 SUPERFAMILY SSF143430 1 82 1.96E-14 T 12-10-2018 SHELI_v1c09480 a775aa7cfdb7db38afa550fe27e038f9 102 TIGRFAM TIGR01573 cas2: CRISPR-associated endonuclease Cas2 1 91 1.4E-19 T 12-10-2018 IPR021127 CRISPR-associated endonuclease Cas2 GO:0004521|GO:0043571 SHELI_v1c09480 a775aa7cfdb7db38afa550fe27e038f9 102 Hamap MF_01471 CRISPR-associated endoribonuclease Cas2 [cas2]. 1 93 14.689 T 12-10-2018 IPR021127 CRISPR-associated endonuclease Cas2 GO:0004521|GO:0043571 SHELI_v1c09480 a775aa7cfdb7db38afa550fe27e038f9 102 Pfam PF09827 CRISPR associated protein Cas2 1 79 5.6E-18 T 12-10-2018 IPR019199 Virulence-associated protein D / CRISPR associated protein Cas2 SHELI_v1c10690 2cdd20d69bee13fd7e446a8169848e35 453 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 226 452 2.0E-80 T 12-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 SHELI_v1c10690 2cdd20d69bee13fd7e446a8169848e35 453 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 26 55 - T 12-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 SHELI_v1c10690 2cdd20d69bee13fd7e446a8169848e35 453 SUPERFAMILY SSF52777 216 453 5.34E-78 T 12-10-2018 SHELI_v1c10690 2cdd20d69bee13fd7e446a8169848e35 453 Gene3D G3DSA:3.30.559.10 213 450 4.6E-79 T 12-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 SHELI_v1c10690 2cdd20d69bee13fd7e446a8169848e35 453 Gene3D G3DSA:2.40.50.100 2 100 7.6E-21 T 12-10-2018 SHELI_v1c10690 2cdd20d69bee13fd7e446a8169848e35 453 Pfam PF00364 Biotin-requiring enzyme 4 75 1.4E-16 T 12-10-2018 IPR000089 Biotin/lipoyl attachment SHELI_v1c10690 2cdd20d69bee13fd7e446a8169848e35 453 Gene3D G3DSA:4.10.320.10 141 185 1.5E-15 T 12-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 SHELI_v1c10690 2cdd20d69bee13fd7e446a8169848e35 453 SUPERFAMILY SSF51230 2 94 4.45E-22 T 12-10-2018 IPR011053 Single hybrid motif SHELI_v1c10690 2cdd20d69bee13fd7e446a8169848e35 453 SUPERFAMILY SSF47005 141 184 1.23E-10 T 12-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 SHELI_v1c10690 2cdd20d69bee13fd7e446a8169848e35 453 Pfam PF02817 e3 binding domain 145 180 6.6E-14 T 12-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 SHELI_v1c00020 e76d0037a45c7678dd1ded72d69af58d 374 SUPERFAMILY SSF55979 1 123 6.45E-19 T 12-10-2018 SHELI_v1c00020 e76d0037a45c7678dd1ded72d69af58d 374 TIGRFAM TIGR00663 dnan: DNA polymerase III, beta subunit 1 371 4.7E-75 T 12-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 SHELI_v1c00020 e76d0037a45c7678dd1ded72d69af58d 374 SUPERFAMILY SSF55979 132 247 3.58E-18 T 12-10-2018 SHELI_v1c00020 e76d0037a45c7678dd1ded72d69af58d 374 PIRSF PIRSF000804 1 373 6.0E-74 T 12-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 SHELI_v1c00020 e76d0037a45c7678dd1ded72d69af58d 374 Pfam PF02767 DNA polymerase III beta subunit, central domain 134 247 2.4E-21 T 12-10-2018 IPR022637 DNA polymerase III, beta sliding clamp, central GO:0003887|GO:0006260|GO:0008408|GO:0009360 SHELI_v1c00020 e76d0037a45c7678dd1ded72d69af58d 374 Gene3D G3DSA:3.10.150.10 1 246 1.3E-81 T 12-10-2018 SHELI_v1c00020 e76d0037a45c7678dd1ded72d69af58d 374 SUPERFAMILY SSF55979 250 371 1.2E-21 T 12-10-2018 SHELI_v1c00020 e76d0037a45c7678dd1ded72d69af58d 374 Gene3D G3DSA:3.70.10.10 142 371 1.3E-81 T 12-10-2018 SHELI_v1c00020 e76d0037a45c7678dd1ded72d69af58d 374 Pfam PF00712 DNA polymerase III beta subunit, N-terminal domain 1 123 7.0E-23 T 12-10-2018 IPR022634 DNA polymerase III, beta sliding clamp, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 SHELI_v1c00020 e76d0037a45c7678dd1ded72d69af58d 374 SMART SM00480 17 369 1.1E-75 T 12-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 SHELI_v1c00020 e76d0037a45c7678dd1ded72d69af58d 374 Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain 251 371 3.7E-23 T 12-10-2018 IPR022635 DNA polymerase III, beta sliding clamp, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 SHELI_v1c11250 a71069ef92b3ecfcd6a9e2a8310b440f 257 SUPERFAMILY SSF52540 1 253 6.18E-64 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHELI_v1c11250 a71069ef92b3ecfcd6a9e2a8310b440f 257 Gene3D G3DSA:3.40.50.300 1 255 1.5E-79 T 12-10-2018 SHELI_v1c11250 a71069ef92b3ecfcd6a9e2a8310b440f 257 Pfam PF13614 AAA domain 3 178 1.5E-64 T 12-10-2018 IPR025669 AAA domain SHELI_v1c11250 a71069ef92b3ecfcd6a9e2a8310b440f 257 PIRSF PIRSF009320 94 255 2.4E-11 T 12-10-2018 SHELI_v1c11250 a71069ef92b3ecfcd6a9e2a8310b440f 257 PIRSF PIRSF009320 2 96 6.3E-15 T 12-10-2018 SHELI_v1c02050 295e60416929cc27bcf48fdfddc30583 64 TIGRFAM TIGR00001 rpmI_bact: ribosomal protein bL35 2 63 1.8E-23 T 12-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 SHELI_v1c02050 295e60416929cc27bcf48fdfddc30583 64 Hamap MF_00514 50S ribosomal protein L35 [rpmI]. 1 64 17.622 T 12-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 SHELI_v1c02050 295e60416929cc27bcf48fdfddc30583 64 Pfam PF01632 Ribosomal protein L35 2 62 6.0E-22 T 12-10-2018 IPR021137 Ribosomal protein L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHELI_v1c02050 295e60416929cc27bcf48fdfddc30583 64 ProSitePatterns PS00936 Ribosomal protein L35 signature. 5 31 - T 12-10-2018 IPR018265 Ribosomal protein L35, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHELI_v1c02050 295e60416929cc27bcf48fdfddc30583 64 Gene3D G3DSA:2.40.50.530 1 63 3.3E-18 T 12-10-2018 SHELI_v1c02050 295e60416929cc27bcf48fdfddc30583 64 PRINTS PR00064 Ribosomal protein L35 signature 3 20 1.6E-18 T 12-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 SHELI_v1c02050 295e60416929cc27bcf48fdfddc30583 64 PRINTS PR00064 Ribosomal protein L35 signature 21 35 1.6E-18 T 12-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 SHELI_v1c02050 295e60416929cc27bcf48fdfddc30583 64 PRINTS PR00064 Ribosomal protein L35 signature 36 54 1.6E-18 T 12-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 SHELI_v1c02050 295e60416929cc27bcf48fdfddc30583 64 SUPERFAMILY SSF143034 2 62 2.22E-19 T 12-10-2018 IPR037229 Ribosomal protein L35 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHELI_v1c00480 5024817f5d47ae56d0c1f332f4745317 122 Gene3D G3DSA:3.30.1390.10 53 122 1.8E-23 T 12-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like SHELI_v1c00480 5024817f5d47ae56d0c1f332f4745317 122 Gene3D G3DSA:1.20.5.710 3 52 1.7E-18 T 12-10-2018 SHELI_v1c00480 5024817f5d47ae56d0c1f332f4745317 122 ProDom PD001326 RIBOSOMAL L7/L12 50S RIBONUCLEOPROTEIN CHLOROPLAST L12 PLASTID DIRECT SEQUENCING PEPTIDE 57 122 6.0E-24 T 12-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHELI_v1c00480 5024817f5d47ae56d0c1f332f4745317 122 Pfam PF00542 Ribosomal protein L7/L12 C-terminal domain 56 122 6.8E-26 T 12-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHELI_v1c00480 5024817f5d47ae56d0c1f332f4745317 122 SUPERFAMILY SSF54736 53 122 3.49E-21 T 12-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like SHELI_v1c00480 5024817f5d47ae56d0c1f332f4745317 122 Pfam PF16320 Ribosomal protein L7/L12 dimerisation domain 4 51 3.3E-16 T 12-10-2018 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHELI_v1c00480 5024817f5d47ae56d0c1f332f4745317 122 TIGRFAM TIGR00855 L12: ribosomal protein bL12 1 122 3.8E-39 T 12-10-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHELI_v1c00480 5024817f5d47ae56d0c1f332f4745317 122 Hamap MF_00368 50S ribosomal protein L7/L12 [rplL]. 2 122 21.449 T 12-10-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHELI_v1c00480 5024817f5d47ae56d0c1f332f4745317 122 SUPERFAMILY SSF48300 3 51 3.92E-12 T 12-10-2018 IPR036235 Ribosomal protein L7/L12, oligomerisation domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHELI_v1c00040 273c22acabfee6e23f8b781da9afb226 814 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 554 603 1.8E-5 T 12-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 SHELI_v1c00040 273c22acabfee6e23f8b781da9afb226 814 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 713 749 4.3E-6 T 12-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 SHELI_v1c00040 273c22acabfee6e23f8b781da9afb226 814 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 760 802 3.0E-9 T 12-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 SHELI_v1c00040 273c22acabfee6e23f8b781da9afb226 814 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 506 544 1.5E-8 T 12-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 SHELI_v1c00040 273c22acabfee6e23f8b781da9afb226 814 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 660 703 4.9E-11 T 12-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 SHELI_v1c00040 273c22acabfee6e23f8b781da9afb226 814 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 611 654 7.9E-8 T 12-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 SHELI_v1c00040 273c22acabfee6e23f8b781da9afb226 814 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 32 471 9.3E-150 T 12-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 SHELI_v1c00040 273c22acabfee6e23f8b781da9afb226 814 TIGRFAM TIGR01063 gyrA: DNA gyrase, A subunit 9 803 1.0E-304 T 12-10-2018 SHELI_v1c00040 273c22acabfee6e23f8b781da9afb226 814 Gene3D G3DSA:3.90.199.10 32 487 1.7E-194 T 12-10-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 SHELI_v1c00040 273c22acabfee6e23f8b781da9afb226 814 SUPERFAMILY SSF101904 500 809 2.88E-80 T 12-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal SHELI_v1c00040 273c22acabfee6e23f8b781da9afb226 814 SUPERFAMILY SSF56719 30 488 4.05E-166 T 12-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 SHELI_v1c00040 273c22acabfee6e23f8b781da9afb226 814 Gene3D G3DSA:3.30.1360.40 236 331 1.7E-194 T 12-10-2018 SHELI_v1c00040 273c22acabfee6e23f8b781da9afb226 814 Gene3D G3DSA:1.10.268.10 368 458 1.7E-194 T 12-10-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily GO:0003677|GO:0003918|GO:0005524 Reactome: R-HSA-4615885 SHELI_v1c00040 273c22acabfee6e23f8b781da9afb226 814 SMART SM00434 11 465 5.3E-239 T 12-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 SHELI_v1c00040 273c22acabfee6e23f8b781da9afb226 814 Gene3D G3DSA:2.120.10.90 499 806 1.1E-88 T 12-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal SHELI_v1c02750 4fd0faf35f18ad32e01d132d27cf206c 448 Pfam PF00448 SRP54-type protein, GTPase domain 101 296 4.3E-72 T 12-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 SHELI_v1c02750 4fd0faf35f18ad32e01d132d27cf206c 448 Hamap MF_00306 Signal recognition particle 54 kDa protein [srp54]. 7 446 31.737 T 12-10-2018 IPR022941 Signal recognition particle, SRP54 subunit GO:0003924|GO:0005525|GO:0006614|GO:0048500 Reactome: R-HSA-1799339 SHELI_v1c02750 4fd0faf35f18ad32e01d132d27cf206c 448 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 269 282 - T 12-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 SHELI_v1c02750 4fd0faf35f18ad32e01d132d27cf206c 448 Gene3D G3DSA:3.40.50.300 92 285 1.9E-113 T 12-10-2018 SHELI_v1c02750 4fd0faf35f18ad32e01d132d27cf206c 448 TIGRFAM TIGR00959 ffh: signal recognition particle protein 5 427 6.3E-168 T 12-10-2018 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 SHELI_v1c02750 4fd0faf35f18ad32e01d132d27cf206c 448 Pfam PF02978 Signal peptide binding domain 327 426 9.2E-24 T 12-10-2018 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 SHELI_v1c02750 4fd0faf35f18ad32e01d132d27cf206c 448 SMART SM00963 3 88 3.8E-24 T 12-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 SHELI_v1c02750 4fd0faf35f18ad32e01d132d27cf206c 448 SMART SM00962 101 296 6.4E-104 T 12-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 SHELI_v1c02750 4fd0faf35f18ad32e01d132d27cf206c 448 SUPERFAMILY SSF47446 327 429 2.13E-27 T 12-10-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 SHELI_v1c02750 4fd0faf35f18ad32e01d132d27cf206c 448 Gene3D G3DSA:1.10.260.30 327 447 9.2E-32 T 12-10-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 SHELI_v1c02750 4fd0faf35f18ad32e01d132d27cf206c 448 Pfam PF02881 SRP54-type protein, helical bundle domain 7 84 5.9E-18 T 12-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 SHELI_v1c02750 4fd0faf35f18ad32e01d132d27cf206c 448 SMART SM00382 100 301 1.9E-12 T 12-10-2018 IPR003593 AAA+ ATPase domain SHELI_v1c02750 4fd0faf35f18ad32e01d132d27cf206c 448 Gene3D G3DSA:1.20.120.140 7 306 1.9E-113 T 12-10-2018 SHELI_v1c02750 4fd0faf35f18ad32e01d132d27cf206c 448 SUPERFAMILY SSF52540 44 353 1.0E-46 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHELI_v1c02250 0ddc7939d614507c6ec1196e24cf5356 145 SUPERFAMILY SSF141091 1 97 1.96E-30 T 12-10-2018 IPR036164 L21-like superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHELI_v1c02250 0ddc7939d614507c6ec1196e24cf5356 145 Hamap MF_01363 50S ribosomal protein L21 [rplU]. 1 99 23.052 T 12-10-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHELI_v1c02250 0ddc7939d614507c6ec1196e24cf5356 145 TIGRFAM TIGR00061 L21: ribosomal protein bL21 2 97 1.0E-29 T 12-10-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHELI_v1c02250 0ddc7939d614507c6ec1196e24cf5356 145 Pfam PF00829 Ribosomal prokaryotic L21 protein 1 96 2.4E-33 T 12-10-2018 IPR028909 Ribosomal protein L21-like GO:0005840 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHELI_v1c02250 0ddc7939d614507c6ec1196e24cf5356 145 ProSitePatterns PS01169 Ribosomal protein L21 signature. 68 90 - T 12-10-2018 IPR018258 Ribosomal protein L21, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHELI_v1c00680 0656f520c6f00c77d8d841427746b672 463 SUPERFAMILY SSF50615 3 77 2.07E-25 T 12-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 SHELI_v1c00680 0656f520c6f00c77d8d841427746b672 463 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 8 75 6.9E-22 T 12-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 SHELI_v1c00680 0656f520c6f00c77d8d841427746b672 463 SUPERFAMILY SSF47917 347 461 3.14E-49 T 12-10-2018 SHELI_v1c00680 0656f520c6f00c77d8d841427746b672 463 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 131 344 2.9E-68 T 12-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 SHELI_v1c00680 0656f520c6f00c77d8d841427746b672 463 SMART SM00382 143 329 2.5E-7 T 12-10-2018 IPR003593 AAA+ ATPase domain SHELI_v1c00680 0656f520c6f00c77d8d841427746b672 463 Hamap MF_01347 ATP synthase subunit beta [atpB]. 3 462 57.493 T 12-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 SHELI_v1c00680 0656f520c6f00c77d8d841427746b672 463 TIGRFAM TIGR01039 atpD: ATP synthase F1, beta subunit 5 461 2.4E-249 T 12-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 SHELI_v1c00680 0656f520c6f00c77d8d841427746b672 463 Gene3D G3DSA:1.10.1140.10 347 462 2.1E-53 T 12-10-2018 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 SHELI_v1c00680 0656f520c6f00c77d8d841427746b672 463 SUPERFAMILY SSF52540 79 349 1.22E-92 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHELI_v1c00680 0656f520c6f00c77d8d841427746b672 463 Gene3D G3DSA:3.40.50.300 78 346 2.0E-116 T 12-10-2018 SHELI_v1c00680 0656f520c6f00c77d8d841427746b672 463 Gene3D G3DSA:2.40.10.170 1 77 7.3E-29 T 12-10-2018 SHELI_v1c03950 efae3555e10e0002bbbe32d8586a0f58 170 Hamap MF_00004 Adenine phosphoribosyltransferase [apt]. 3 170 32.372 T 12-10-2018 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-6798695|Reactome: R-HSA-74217 SHELI_v1c03950 efae3555e10e0002bbbe32d8586a0f58 170 Pfam PF00156 Phosphoribosyl transferase domain 39 148 3.5E-15 T 12-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 SHELI_v1c03950 efae3555e10e0002bbbe32d8586a0f58 170 TIGRFAM TIGR01090 apt: adenine phosphoribosyltransferase 3 170 4.3E-58 T 12-10-2018 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-6798695|Reactome: R-HSA-74217 SHELI_v1c03950 efae3555e10e0002bbbe32d8586a0f58 170 SUPERFAMILY SSF53271 2 164 1.42E-43 T 12-10-2018 IPR029057 Phosphoribosyltransferase-like SHELI_v1c03950 efae3555e10e0002bbbe32d8586a0f58 170 Gene3D G3DSA:3.40.50.2020 1 170 7.2E-54 T 12-10-2018 SHELI_v1c02230 a78359a3e3f42fe5075eba7bf579558a 300 SUPERFAMILY SSF53790 21 245 1.83E-55 T 12-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 SHELI_v1c02230 a78359a3e3f42fe5075eba7bf579558a 300 Gene3D G3DSA:3.30.950.10 133 251 4.7E-27 T 12-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 SHELI_v1c02230 a78359a3e3f42fe5075eba7bf579558a 300 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 23 225 1.3E-17 T 12-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 SHELI_v1c02230 a78359a3e3f42fe5075eba7bf579558a 300 ProSitePatterns PS01296 RsmI AdoMet-dependent methyltransferase protein family signature. 100 111 - T 12-10-2018 IPR018063 SAM-dependent methyltransferase RsmI, conserved site GO:0008168 SHELI_v1c02230 a78359a3e3f42fe5075eba7bf579558a 300 PIRSF PIRSF005917 11 300 3.0E-80 T 12-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 SHELI_v1c02230 a78359a3e3f42fe5075eba7bf579558a 300 Gene3D G3DSA:3.40.1010.10 7 129 1.1E-36 T 12-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 SHELI_v1c02230 a78359a3e3f42fe5075eba7bf579558a 300 TIGRFAM TIGR00096 TIGR00096: 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 23 299 2.0E-69 T 12-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 SHELI_v1c07010 9e98d476c875b5b983e46bc7ba69c77f 298 SUPERFAMILY SSF53098 87 293 6.83E-39 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily SHELI_v1c07010 9e98d476c875b5b983e46bc7ba69c77f 298 PIRSF PIRSF037748 1 298 4.1E-75 T 12-10-2018 IPR004641 Ribonuclease HIII GO:0004523|GO:0005737|GO:0016070 SHELI_v1c07010 9e98d476c875b5b983e46bc7ba69c77f 298 Pfam PF01351 Ribonuclease HII 89 293 2.0E-26 T 12-10-2018 IPR024567 Ribonuclease HII/HIII domain SHELI_v1c07010 9e98d476c875b5b983e46bc7ba69c77f 298 Gene3D G3DSA:3.30.310.10 1 87 1.0E-5 T 12-10-2018 IPR012295 TBP domain superfamily SHELI_v1c07010 9e98d476c875b5b983e46bc7ba69c77f 298 TIGRFAM TIGR00716 rnhC: ribonuclease HIII 22 293 1.2E-52 T 12-10-2018 IPR004641 Ribonuclease HIII GO:0004523|GO:0005737|GO:0016070 SHELI_v1c07010 9e98d476c875b5b983e46bc7ba69c77f 298 Pfam PF11858 Domain of unknown function (DUF3378) 7 77 1.4E-13 T 12-10-2018 IPR024568 Ribonuclease HIII, N-terminal SHELI_v1c07010 9e98d476c875b5b983e46bc7ba69c77f 298 Gene3D G3DSA:3.30.420.10 88 298 1.4E-64 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 SHELI_v1c06860 1bab4e32f62cdf41d3b7a5172857b249 47 Pfam PF00471 Ribosomal protein L33 4 47 1.4E-11 T 12-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHELI_v1c06860 1bab4e32f62cdf41d3b7a5172857b249 47 SUPERFAMILY SSF57829 1 47 5.98E-10 T 12-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 SHELI_v1c06860 1bab4e32f62cdf41d3b7a5172857b249 47 Gene3D G3DSA:2.20.28.120 1 47 4.1E-11 T 12-10-2018 IPR038584 Ribosomal protein L33 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHELI_v1c06860 1bab4e32f62cdf41d3b7a5172857b249 47 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 3 47 5.7E-9 T 12-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHELI_v1c06860 1bab4e32f62cdf41d3b7a5172857b249 47 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 1 47 12.898 T 12-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHELI_v1c06330 4d4fa526ebd8b8680798f2dc9042cb3f 234 SUPERFAMILY SSF100950 76 230 1.57E-27 T 12-10-2018 IPR037171 NagB/RpiA transferase-like SHELI_v1c06330 4d4fa526ebd8b8680798f2dc9042cb3f 234 SMART SM01134 74 234 2.2E-45 T 12-10-2018 SHELI_v1c06330 4d4fa526ebd8b8680798f2dc9042cb3f 234 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 3.4E-5 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 SHELI_v1c06330 4d4fa526ebd8b8680798f2dc9042cb3f 234 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 3.4E-5 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 SHELI_v1c06330 4d4fa526ebd8b8680798f2dc9042cb3f 234 Pfam PF00455 DeoR C terminal sensor domain 76 230 1.7E-37 T 12-10-2018 IPR014036 DeoR C-terminal sensor domain SHELI_v1c06330 4d4fa526ebd8b8680798f2dc9042cb3f 234 SUPERFAMILY SSF46785 4 62 2.18E-9 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily SHELI_v1c06330 4d4fa526ebd8b8680798f2dc9042cb3f 234 Pfam PF08220 DeoR-like helix-turn-helix domain 6 61 1.2E-12 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 SHELI_v1c06330 4d4fa526ebd8b8680798f2dc9042cb3f 234 SMART SM00420 6 58 6.2E-10 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 SHELI_v1c11120 8a53eac30a5be6fee4f278e2bf44e8e0 72 Gene3D G3DSA:3.30.70.100 4 70 1.1E-8 T 12-10-2018 SHELI_v1c11120 8a53eac30a5be6fee4f278e2bf44e8e0 72 Pfam PF00403 Heavy-metal-associated domain 7 66 4.2E-8 T 12-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 SHELI_v1c11120 8a53eac30a5be6fee4f278e2bf44e8e0 72 ProSitePatterns PS01047 Heavy-metal-associated domain. 9 39 - T 12-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 SHELI_v1c11120 8a53eac30a5be6fee4f278e2bf44e8e0 72 SUPERFAMILY SSF55008 5 69 4.58E-9 T 12-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 SHELI_v1c03520 f384f10d6002e6e03882991c29bd3611 88 SMART SM01387 7 87 3.3E-40 T 12-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHELI_v1c03520 f384f10d6002e6e03882991c29bd3611 88 TIGRFAM TIGR00952 S15_bact: ribosomal protein uS15 4 88 1.5E-33 T 12-10-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHELI_v1c03520 f384f10d6002e6e03882991c29bd3611 88 ProDom PD157043 RIBOSOMAL S15 RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 30S CHLOROPLAST S15 MITOCHONDRIAL TYPE 9 87 3.0E-27 T 12-10-2018 SHELI_v1c03520 f384f10d6002e6e03882991c29bd3611 88 Pfam PF00312 Ribosomal protein S15 7 87 1.8E-32 T 12-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHELI_v1c03520 f384f10d6002e6e03882991c29bd3611 88 Gene3D G3DSA:1.10.287.10 2 88 8.7E-31 T 12-10-2018 SHELI_v1c03520 f384f10d6002e6e03882991c29bd3611 88 Hamap MF_01343_B 30S ribosomal protein S15 [rpsO]. 2 88 20.432 T 12-10-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHELI_v1c03520 f384f10d6002e6e03882991c29bd3611 88 ProSitePatterns PS00362 Ribosomal protein S15 signature. 38 68 - T 12-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHELI_v1c03520 f384f10d6002e6e03882991c29bd3611 88 SUPERFAMILY SSF47060 2 88 1.21E-30 T 12-10-2018 IPR009068 S15/NS1, RNA-binding SHELI_v1c09420 170061eb78072c57f8ccc5886e6e93dc 116 Gene3D G3DSA:3.40.50.1010 2 116 8.7E-10 T 12-10-2018 SHELI_v1c09420 170061eb78072c57f8ccc5886e6e93dc 116 Pfam PF01936 NYN domain 7 114 3.3E-15 T 12-10-2018 IPR021139 NYN domain, limkain-b1-type SHELI_v1c11240 35a9aef837c5c9fee7374c491cac6ef2 290 SUPERFAMILY SSF110849 43 174 2.3E-30 T 12-10-2018 IPR036086 ParB/Sulfiredoxin superfamily SHELI_v1c11240 35a9aef837c5c9fee7374c491cac6ef2 290 Gene3D G3DSA:3.90.1530.30 53 112 1.0E-20 T 12-10-2018 SHELI_v1c11240 35a9aef837c5c9fee7374c491cac6ef2 290 Pfam PF02195 ParB-like nuclease domain 42 126 1.5E-25 T 12-10-2018 IPR003115 ParB/Sulfiredoxin SHELI_v1c11240 35a9aef837c5c9fee7374c491cac6ef2 290 Gene3D G3DSA:1.10.10.2830 113 228 1.5E-31 T 12-10-2018 SHELI_v1c11240 35a9aef837c5c9fee7374c491cac6ef2 290 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 42 205 3.3E-53 T 12-10-2018 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 SHELI_v1c11240 35a9aef837c5c9fee7374c491cac6ef2 290 SMART SM00470 40 126 6.5E-33 T 12-10-2018 IPR003115 ParB/Sulfiredoxin SHELI_v1c08250 a061ce47a5b443accf5a36b0ac775478 326 Gene3D G3DSA:3.40.50.10950 20 317 3.8E-100 T 12-10-2018 SHELI_v1c08250 a061ce47a5b443accf5a36b0ac775478 326 Gene3D G3DSA:3.40.50.10750 137 293 3.8E-100 T 12-10-2018 SHELI_v1c08250 a061ce47a5b443accf5a36b0ac775478 326 SUPERFAMILY SSF53659 9 321 3.82E-70 T 12-10-2018 SHELI_v1c08250 a061ce47a5b443accf5a36b0ac775478 326 Pfam PF01515 Phosphate acetyl/butaryl transferase 13 317 2.7E-104 T 12-10-2018 IPR002505 Phosphate acetyl/butaryl transferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 SHELI_v1c08250 a061ce47a5b443accf5a36b0ac775478 326 PIRSF PIRSF000428 1 324 3.0E-98 T 12-10-2018 IPR012147 Phosphate acetyl/butyryltransferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 SHELI_v1c08250 a061ce47a5b443accf5a36b0ac775478 326 TIGRFAM TIGR00651 pta: phosphate acetyltransferase 20 317 6.7E-100 T 12-10-2018 IPR004614 Phosphate acetyltransferase GO:0016407 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 SHELI_v1c08640 9dda87945c0fcb73ee96812f98b750d8 122 Pfam PF00238 Ribosomal protein L14p/L23e 1 122 4.3E-48 T 12-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 SHELI_v1c08640 9dda87945c0fcb73ee96812f98b750d8 122 Hamap MF_01367 50S ribosomal protein L14 [rplN]. 1 122 23.878 T 12-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 SHELI_v1c08640 9dda87945c0fcb73ee96812f98b750d8 122 ProSitePatterns PS00049 Ribosomal protein L14 signature. 60 86 - T 12-10-2018 IPR019972 Ribosomal protein L14P, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SHELI_v1c08640 9dda87945c0fcb73ee96812f98b750d8 122 TIGRFAM TIGR01067 rplN_bact: ribosomal protein uL14 1 122 1.1E-50 T 12-10-2018 IPR005745 Ribosomal protein L14P, bacterial-type GO:0003735|GO:0006412|GO:0015934 SHELI_v1c08640 9dda87945c0fcb73ee96812f98b750d8 122 Gene3D G3DSA:2.40.150.20 1 122 1.9E-47 T 12-10-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 SHELI_v1c08640 9dda87945c0fcb73ee96812f98b750d8 122 SMART SM01374 1 122 2.8E-74 T 12-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 SHELI_v1c08640 9dda87945c0fcb73ee96812f98b750d8 122 SUPERFAMILY SSF50193 1 122 3.01E-45 T 12-10-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 SHELI_v1c08160 0d78bc0167b891fba01f8905159c7693 75 Gene3D G3DSA:1.10.1200.10 2 75 1.5E-15 T 12-10-2018 IPR036736 ACP-like superfamily SHELI_v1c08160 0d78bc0167b891fba01f8905159c7693 75 Pfam PF00550 Phosphopantetheine attachment site 20 68 4.0E-14 T 12-10-2018 IPR009081 Phosphopantetheine binding ACP domain SHELI_v1c08160 0d78bc0167b891fba01f8905159c7693 75 ProSitePatterns PS00012 Phosphopantetheine attachment site. 28 43 - T 12-10-2018 IPR006162 Phosphopantetheine attachment site SHELI_v1c08160 0d78bc0167b891fba01f8905159c7693 75 SUPERFAMILY SSF47336 20 73 2.22E-14 T 12-10-2018 IPR036736 ACP-like superfamily SHELI_v1c02570 fb8d5796ae798533efac0f98ed1cfce0 221 Pfam PF02224 Cytidylate kinase 7 218 5.5E-64 T 12-10-2018 IPR011994 Cytidylate kinase domain GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 SHELI_v1c02570 fb8d5796ae798533efac0f98ed1cfce0 221 Hamap MF_00238 Cytidylate kinase [cmk]. 5 221 27.104 T 12-10-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 SHELI_v1c02570 fb8d5796ae798533efac0f98ed1cfce0 221 Gene3D G3DSA:3.40.50.300 1 220 4.8E-69 T 12-10-2018 SHELI_v1c02570 fb8d5796ae798533efac0f98ed1cfce0 221 SUPERFAMILY SSF52540 6 218 1.8E-35 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHELI_v1c02570 fb8d5796ae798533efac0f98ed1cfce0 221 TIGRFAM TIGR00017 cmk: cytidylate kinase 4 213 5.8E-58 T 12-10-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 SHELI_v1c08320 180912ad4bb87b6e290dac8b501da890 136 Gene3D G3DSA:3.30.230.10 8 136 6.8E-47 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup SHELI_v1c08320 180912ad4bb87b6e290dac8b501da890 136 ProSitePatterns PS00360 Ribosomal protein S9 signature. 75 93 - T 12-10-2018 IPR020574 Ribosomal protein S9, conserved site GO:0003735|GO:0005840|GO:0006412 SHELI_v1c08320 180912ad4bb87b6e290dac8b501da890 136 Hamap MF_00532_B 30S ribosomal protein S9 [rpsI]. 7 136 31.977 T 12-10-2018 IPR023035 Ribosomal protein S9, bacterial/plastid SHELI_v1c08320 180912ad4bb87b6e290dac8b501da890 136 Pfam PF00380 Ribosomal protein S9/S16 16 136 6.2E-43 T 12-10-2018 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 SHELI_v1c08320 180912ad4bb87b6e290dac8b501da890 136 SUPERFAMILY SSF54211 12 136 3.6E-44 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold SHELI_v1c08860 7a1039b5d862ae9b8583386c1ca8bb48 231 SUPERFAMILY SSF52540 2 207 3.18E-41 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHELI_v1c08860 7a1039b5d862ae9b8583386c1ca8bb48 231 SMART SM00382 26 214 4.8E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain SHELI_v1c08860 7a1039b5d862ae9b8583386c1ca8bb48 231 Gene3D G3DSA:3.40.50.300 1 229 3.0E-44 T 12-10-2018 SHELI_v1c08860 7a1039b5d862ae9b8583386c1ca8bb48 231 Pfam PF00005 ABC transporter 18 156 3.4E-24 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SHELI_v1c00330 e6aa0ed01d631f5b436807b59506de9b 53 Pfam PF00471 Ribosomal protein L33 8 52 1.7E-14 T 12-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHELI_v1c00330 e6aa0ed01d631f5b436807b59506de9b 53 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 5 53 14.862 T 12-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHELI_v1c00330 e6aa0ed01d631f5b436807b59506de9b 53 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 8 53 5.7E-13 T 12-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHELI_v1c00330 e6aa0ed01d631f5b436807b59506de9b 53 SUPERFAMILY SSF57829 10 53 3.48E-12 T 12-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 SHELI_v1c00330 e6aa0ed01d631f5b436807b59506de9b 53 Gene3D G3DSA:2.20.28.120 4 53 1.5E-12 T 12-10-2018 IPR038584 Ribosomal protein L33 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHELI_v1c00240 84ab711d1cbc13e9b6c9aa772444d13f 148 Gene3D G3DSA:3.10.430.100 61 148 4.4E-16 T 12-10-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily SHELI_v1c00240 84ab711d1cbc13e9b6c9aa772444d13f 148 TIGRFAM TIGR00158 L9: ribosomal protein bL9 1 145 3.5E-35 T 12-10-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHELI_v1c00240 84ab711d1cbc13e9b6c9aa772444d13f 148 ProSitePatterns PS00651 Ribosomal protein L9 signature. 13 40 - T 12-10-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHELI_v1c00240 84ab711d1cbc13e9b6c9aa772444d13f 148 SUPERFAMILY SSF55653 57 145 1.31E-16 T 12-10-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily SHELI_v1c00240 84ab711d1cbc13e9b6c9aa772444d13f 148 Pfam PF01281 Ribosomal protein L9, N-terminal domain 1 46 5.4E-24 T 12-10-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHELI_v1c00240 84ab711d1cbc13e9b6c9aa772444d13f 148 SUPERFAMILY SSF55658 1 54 4.36E-18 T 12-10-2018 IPR009027 Ribosomal protein L9/RNase H1, N-terminal SHELI_v1c00240 84ab711d1cbc13e9b6c9aa772444d13f 148 Hamap MF_00503 50S ribosomal protein L9 [rplI]. 1 147 20.686 T 12-10-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHELI_v1c00240 84ab711d1cbc13e9b6c9aa772444d13f 148 Gene3D G3DSA:3.40.5.10 1 53 5.8E-22 T 12-10-2018 IPR036935 Ribosomal protein L9, N-terminal domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHELI_v1c00240 84ab711d1cbc13e9b6c9aa772444d13f 148 Pfam PF03948 Ribosomal protein L9, C-terminal domain 64 145 7.4E-15 T 12-10-2018 IPR020069 Ribosomal protein L9, C-terminal SHELI_v1c09560 d469340ae756851ccd0f1be8db4d5f15 310 TIGRFAM TIGR02152 D_ribokin_bact: ribokinase 5 300 6.0E-95 T 12-10-2018 IPR011877 Ribokinase GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15|Reactome: R-HSA-71336 SHELI_v1c09560 d469340ae756851ccd0f1be8db4d5f15 310 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 248 261 - T 12-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 SHELI_v1c09560 d469340ae756851ccd0f1be8db4d5f15 310 PRINTS PR00990 Ribokinase signature 7 28 1.4E-25 T 12-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 SHELI_v1c09560 d469340ae756851ccd0f1be8db4d5f15 310 PRINTS PR00990 Ribokinase signature 174 189 1.4E-25 T 12-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 SHELI_v1c09560 d469340ae756851ccd0f1be8db4d5f15 310 PRINTS PR00990 Ribokinase signature 106 119 1.4E-25 T 12-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 SHELI_v1c09560 d469340ae756851ccd0f1be8db4d5f15 310 PRINTS PR00990 Ribokinase signature 219 230 1.4E-25 T 12-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 SHELI_v1c09560 d469340ae756851ccd0f1be8db4d5f15 310 PRINTS PR00990 Ribokinase signature 34 53 1.4E-25 T 12-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 SHELI_v1c09560 d469340ae756851ccd0f1be8db4d5f15 310 Gene3D G3DSA:3.40.1190.20 1 302 2.6E-86 T 12-10-2018 IPR029056 Ribokinase-like SHELI_v1c09560 d469340ae756851ccd0f1be8db4d5f15 310 Pfam PF00294 pfkB family carbohydrate kinase 3 296 1.6E-59 T 12-10-2018 IPR011611 Carbohydrate kinase PfkB SHELI_v1c09560 d469340ae756851ccd0f1be8db4d5f15 310 Hamap MF_01987 Ribokinase [rbsK]. 3 303 22.736 T 12-10-2018 IPR011877 Ribokinase GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15|Reactome: R-HSA-71336 SHELI_v1c09560 d469340ae756851ccd0f1be8db4d5f15 310 SUPERFAMILY SSF53613 3 299 2.34E-72 T 12-10-2018 IPR029056 Ribokinase-like SHELI_v1c08620 973207ca691cf856c6de0e09102dccf4 186 ProSitePatterns PS00358 Ribosomal protein L5 signature. 64 80 - T 12-10-2018 IPR020929 Ribosomal protein L5, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SHELI_v1c08620 973207ca691cf856c6de0e09102dccf4 186 Pfam PF00281 Ribosomal protein L5 32 87 9.8E-26 T 12-10-2018 IPR031310 Ribosomal protein L5, N-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SHELI_v1c08620 973207ca691cf856c6de0e09102dccf4 186 Pfam PF00673 ribosomal L5P family C-terminus 91 184 1.1E-42 T 12-10-2018 IPR031309 Ribosomal protein L5, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SHELI_v1c08620 973207ca691cf856c6de0e09102dccf4 186 Hamap MF_01333_B 50S ribosomal protein L5 [rplE]. 8 186 43.352 T 12-10-2018 IPR020930 Ribosomal protein L5, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHELI_v1c08620 973207ca691cf856c6de0e09102dccf4 186 SUPERFAMILY SSF55282 10 185 2.14E-76 T 12-10-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SHELI_v1c08620 973207ca691cf856c6de0e09102dccf4 186 PIRSF PIRSF002161 3 186 7.2E-70 T 12-10-2018 IPR002132 Ribosomal protein L5 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SHELI_v1c08620 973207ca691cf856c6de0e09102dccf4 186 Gene3D G3DSA:3.30.1440.10 6 186 3.0E-81 T 12-10-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SHELI_v1c05670 8d0142057345c515e539b87856c773b9 68 TIGRFAM TIGR01280 xseB: exodeoxyribonuclease VII, small subunit 5 61 2.4E-13 T 12-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 SHELI_v1c05670 8d0142057345c515e539b87856c773b9 68 Pfam PF02609 Exonuclease VII small subunit 6 57 1.8E-12 T 12-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 SHELI_v1c05670 8d0142057345c515e539b87856c773b9 68 Gene3D G3DSA:1.10.287.1040 1 68 1.1E-11 T 12-10-2018 IPR037004 Exonuclease VII, small subunit superfamily GO:0006308|GO:0008855|GO:0009318 SHELI_v1c05670 8d0142057345c515e539b87856c773b9 68 Hamap MF_00337 Exodeoxyribonuclease 7 small subunit [xseB]. 5 65 11.263 T 12-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 SHELI_v1c05670 8d0142057345c515e539b87856c773b9 68 SUPERFAMILY SSF116842 2 63 2.88E-13 T 12-10-2018 SHELI_v1c02780 28943537f5771e6ea97cd1dda8250a15 154 PIRSF PIRSF004505 1 154 1.8E-39 T 12-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 SHELI_v1c02780 28943537f5771e6ea97cd1dda8250a15 154 Pfam PF02590 Predicted SPOUT methyltransferase 1 153 1.2E-39 T 12-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 SHELI_v1c02780 28943537f5771e6ea97cd1dda8250a15 154 SUPERFAMILY SSF75217 1 152 2.88E-33 T 12-10-2018 IPR029028 Alpha/beta knot methyltransferases SHELI_v1c02780 28943537f5771e6ea97cd1dda8250a15 154 Gene3D G3DSA:3.40.1280.10 1 154 3.7E-40 T 12-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal SHELI_v1c02780 28943537f5771e6ea97cd1dda8250a15 154 Hamap MF_00658 Ribosomal RNA large subunit methyltransferase H [rlmH]. 1 154 21.768 T 12-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 SHELI_v1c03290 50e8033dc77e46c9505410a64db98e3b 191 SUPERFAMILY SSF52317 1 189 1.15E-39 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like SHELI_v1c03290 50e8033dc77e46c9505410a64db98e3b 191 Pfam PF01965 DJ-1/PfpI family 3 172 1.1E-30 T 12-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 SHELI_v1c03290 50e8033dc77e46c9505410a64db98e3b 191 Gene3D G3DSA:3.40.50.880 1 191 2.6E-40 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like SHELI_v1c03290 50e8033dc77e46c9505410a64db98e3b 191 TIGRFAM TIGR01383 not_thiJ: DJ-1 family protein 4 184 2.2E-44 T 12-10-2018 IPR006287 Protein/nucleic acid deglycase DJ-1 Reactome: R-HSA-3899300 SHELI_v1c06680 57e7b0d66f05e63e0a06ab26954e1f91 260 Pfam PF11967 Recombination protein O N terminal 1 74 5.9E-16 T 12-10-2018 IPR022572 DNA replication/recombination mediator RecO, N-terminal SHELI_v1c06680 57e7b0d66f05e63e0a06ab26954e1f91 260 Pfam PF02565 Recombination protein O C terminal 88 181 1.3E-6 T 12-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 SHELI_v1c06680 57e7b0d66f05e63e0a06ab26954e1f91 260 SUPERFAMILY SSF57863 85 188 6.54E-10 T 12-10-2018 IPR037278 ARFGAP/RecO-like zinc finger SHELI_v1c06680 57e7b0d66f05e63e0a06ab26954e1f91 260 SUPERFAMILY SSF50249 2 74 8.22E-10 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold SHELI_v1c06680 57e7b0d66f05e63e0a06ab26954e1f91 260 TIGRFAM TIGR00613 reco: DNA repair protein RecO 4 245 3.8E-37 T 12-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 SHELI_v1c06680 57e7b0d66f05e63e0a06ab26954e1f91 260 Hamap MF_00201 DNA repair protein RecO [recO]. 2 246 16.121 T 12-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 SHELI_v1c06680 57e7b0d66f05e63e0a06ab26954e1f91 260 Gene3D G3DSA:2.40.50.140 5 75 4.8E-5 T 12-10-2018 SHELI_v1c08510 55ad9ad8182e42dc7f1b5d28f57090ae 37 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 37 18.047 T 12-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHELI_v1c08510 55ad9ad8182e42dc7f1b5d28f57090ae 37 TIGRFAM TIGR01022 rpmJ_bact: ribosomal protein bL36 1 37 7.1E-22 T 12-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHELI_v1c08510 55ad9ad8182e42dc7f1b5d28f57090ae 37 SUPERFAMILY SSF57840 1 37 5.89E-17 T 12-10-2018 IPR035977 Ribosomal protein L36 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHELI_v1c08510 55ad9ad8182e42dc7f1b5d28f57090ae 37 ProDom PD002101 RIBOSOMAL L36 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID B SUBUNIT DIRECT SEQUENCING 9 37 1.0E-8 T 12-10-2018 SHELI_v1c08510 55ad9ad8182e42dc7f1b5d28f57090ae 37 Pfam PF00444 Ribosomal protein L36 1 37 1.7E-19 T 12-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHELI_v1c08510 55ad9ad8182e42dc7f1b5d28f57090ae 37 ProSitePatterns PS00828 Ribosomal protein L36 signature. 11 36 - T 12-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHELI_v1c10990 2479802b4112789b35ee21786a7edd96 170 Gene3D G3DSA:3.90.870.10 3 170 1.3E-25 T 12-10-2018 SHELI_v1c10990 2479802b4112789b35ee21786a7edd96 170 Pfam PF01300 Telomere recombination 16 166 2.5E-20 T 12-10-2018 IPR006070 YrdC-like domain GO:0003725 SHELI_v1c10990 2479802b4112789b35ee21786a7edd96 170 SUPERFAMILY SSF55821 7 166 1.83E-26 T 12-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily SHELI_v1c07830 b4c7b18a45bf4eb67485b256e5d1dfae 187 SUPERFAMILY SSF53335 1 181 1.93E-35 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHELI_v1c07830 b4c7b18a45bf4eb67485b256e5d1dfae 187 TIGRFAM TIGR00095 TIGR00095: 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 2 183 1.9E-35 T 12-10-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 SHELI_v1c07830 b4c7b18a45bf4eb67485b256e5d1dfae 187 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 118 124 - T 12-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 SHELI_v1c07830 b4c7b18a45bf4eb67485b256e5d1dfae 187 Pfam PF03602 Conserved hypothetical protein 95 1 181 2.0E-46 T 12-10-2018 SHELI_v1c07830 b4c7b18a45bf4eb67485b256e5d1dfae 187 Gene3D G3DSA:3.40.50.150 1 187 6.2E-43 T 12-10-2018 SHELI_v1c07830 b4c7b18a45bf4eb67485b256e5d1dfae 187 PIRSF PIRSF004553 1 185 7.3E-44 T 12-10-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 SHELI_v1c02450 55245f468170171c8ad7c8c6464059f3 237 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 1 237 24.708 T 12-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 SHELI_v1c02450 55245f468170171c8ad7c8c6464059f3 237 Pfam PF01709 Transcriptional regulator 6 236 1.3E-69 T 12-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 SHELI_v1c02450 55245f468170171c8ad7c8c6464059f3 237 SUPERFAMILY SSF75625 1 236 9.94E-68 T 12-10-2018 IPR029072 YebC-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 SHELI_v1c02450 55245f468170171c8ad7c8c6464059f3 237 Gene3D G3DSA:1.10.10.200 17 77 2.8E-19 T 12-10-2018 IPR017856 Integrase-like, N-terminal SHELI_v1c02450 55245f468170171c8ad7c8c6464059f3 237 Gene3D G3DSA:3.30.70.980 130 203 1.8E-40 T 12-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 SHELI_v1c02450 55245f468170171c8ad7c8c6464059f3 237 Gene3D G3DSA:3.30.70.980 83 235 1.8E-40 T 12-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 SHELI_v1c00980 c1c39f5d5fbb260b5fbe1834b6b28d5b 234 ProSitePatterns PS01232 Purine and other phosphorylases family 1 signature. 61 76 - T 12-10-2018 IPR018016 Nucleoside phosphorylase, conserved site GO:0016763 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-73614|Reactome: R-HSA-73621 SHELI_v1c00980 c1c39f5d5fbb260b5fbe1834b6b28d5b 234 Pfam PF01048 Phosphorylase superfamily 14 219 2.1E-29 T 12-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 SHELI_v1c00980 c1c39f5d5fbb260b5fbe1834b6b28d5b 234 TIGRFAM TIGR00107 deoD: purine nucleoside phosphorylase 4 232 2.5E-79 T 12-10-2018 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 SHELI_v1c00980 c1c39f5d5fbb260b5fbe1834b6b28d5b 234 SUPERFAMILY SSF53167 1 232 6.15E-74 T 12-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 SHELI_v1c00980 c1c39f5d5fbb260b5fbe1834b6b28d5b 234 Gene3D G3DSA:3.40.50.1580 2 233 2.4E-61 T 12-10-2018 SHELI_v1c08560 e89997d9e0306653c513fcea6c22bb32 145 Pfam PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 27 143 1.2E-35 T 12-10-2018 IPR021131 Ribosomal protein L18e/L15P SHELI_v1c08560 e89997d9e0306653c513fcea6c22bb32 145 TIGRFAM TIGR01071 rplO_bact: ribosomal protein uL15 2 142 1.1E-51 T 12-10-2018 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHELI_v1c08560 e89997d9e0306653c513fcea6c22bb32 145 SUPERFAMILY SSF52080 4 143 7.06E-47 T 12-10-2018 IPR036227 Ribosomal L18e/L15P superfamily SHELI_v1c08560 e89997d9e0306653c513fcea6c22bb32 145 Hamap MF_01341 50S ribosomal protein L15 [rplO]. 3 145 21.38 T 12-10-2018 IPR030878 Ribosomal protein L15 GO:0003735|GO:0006412|GO:0015934 SHELI_v1c08560 e89997d9e0306653c513fcea6c22bb32 145 Gene3D G3DSA:3.100.10.10 67 145 1.2E-21 T 12-10-2018 SHELI_v1c08560 e89997d9e0306653c513fcea6c22bb32 145 ProSitePatterns PS00475 Ribosomal protein L15 signature. 109 139 - T 12-10-2018 IPR001196 Ribosomal protein L15, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SHELI_v1c02300 264ef613e438d9095ac83989bde6b80a 262 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 4 98 2.8E-11 T 12-10-2018 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal SHELI_v1c02300 264ef613e438d9095ac83989bde6b80a 262 Gene3D G3DSA:3.40.50.720 3 158 4.4E-27 T 12-10-2018 SHELI_v1c02300 264ef613e438d9095ac83989bde6b80a 262 PIRSF PIRSF000193 1 262 9.8E-47 T 12-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 SHELI_v1c02300 264ef613e438d9095ac83989bde6b80a 262 SUPERFAMILY SSF48179 160 261 6.97E-16 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 SHELI_v1c02300 264ef613e438d9095ac83989bde6b80a 262 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 161 261 7.5E-16 T 12-10-2018 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 SHELI_v1c02300 264ef613e438d9095ac83989bde6b80a 262 SUPERFAMILY SSF51735 2 157 1.38E-16 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily SHELI_v1c02300 264ef613e438d9095ac83989bde6b80a 262 Gene3D G3DSA:1.10.3730.10 159 262 1.4E-16 T 12-10-2018 SHELI_v1c08290 5d3954020ae9f84fa8d7b6d1ea05221d 82 Pfam PF01228 Glycine radical 6 63 2.1E-25 T 12-10-2018 IPR001150 Glycine radical domain GO:0003824 SHELI_v1c08290 5d3954020ae9f84fa8d7b6d1ea05221d 82 Gene3D G3DSA:3.20.70.20 1 82 4.0E-32 T 12-10-2018 SHELI_v1c08290 5d3954020ae9f84fa8d7b6d1ea05221d 82 ProSitePatterns PS00850 Glycine radical domain signature. 52 60 - T 12-10-2018 IPR019777 Formate C-acetyltransferase glycine radical, conserved site SHELI_v1c08290 5d3954020ae9f84fa8d7b6d1ea05221d 82 SUPERFAMILY SSF51998 3 82 1.65E-33 T 12-10-2018 SHELI_v1c07380 f2fd86b0f57566cfe8dff7f86207fbd5 109 SMART SM00316 3 77 8.7E-17 T 12-10-2018 IPR022967 RNA-binding domain, S1 SHELI_v1c07380 f2fd86b0f57566cfe8dff7f86207fbd5 109 Gene3D G3DSA:2.40.50.140 1 88 6.4E-20 T 12-10-2018 SHELI_v1c07380 f2fd86b0f57566cfe8dff7f86207fbd5 109 SUPERFAMILY SSF50249 2 91 8.21E-17 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold SHELI_v1c07380 f2fd86b0f57566cfe8dff7f86207fbd5 109 Pfam PF00575 S1 RNA binding domain 3 76 1.3E-13 T 12-10-2018 IPR003029 S1 domain GO:0003676 SHELI_v1c07750 9e0bb6c6281b02ee37008882b46a4128 205 Gene3D G3DSA:3.40.50.10240 3 205 6.0E-37 T 12-10-2018 IPR036759 Thiamin pyrophosphokinase, catalytic domain superfamily GO:0004788|GO:0005524|GO:0009229 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|Reactome: R-HSA-196819 SHELI_v1c07750 9e0bb6c6281b02ee37008882b46a4128 205 SUPERFAMILY SSF63999 16 119 6.41E-11 T 12-10-2018 IPR036759 Thiamin pyrophosphokinase, catalytic domain superfamily GO:0004788|GO:0005524|GO:0009229 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|Reactome: R-HSA-196819 SHELI_v1c07750 9e0bb6c6281b02ee37008882b46a4128 205 Pfam PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain 136 200 1.0E-6 T 12-10-2018 IPR007373 Thiamin pyrophosphokinase, thiamin-binding domain GO:0009229|GO:0030975 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|Reactome: R-HSA-196819 SHELI_v1c07750 9e0bb6c6281b02ee37008882b46a4128 205 SMART SM00983 134 199 0.0029 T 12-10-2018 IPR007373 Thiamin pyrophosphokinase, thiamin-binding domain GO:0009229|GO:0030975 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|Reactome: R-HSA-196819 SHELI_v1c07750 9e0bb6c6281b02ee37008882b46a4128 205 SUPERFAMILY SSF63862 126 201 7.72E-8 T 12-10-2018 IPR036371 Thiamin pyrophosphokinase, thiamin-binding domain superfamily GO:0009229 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|Reactome: R-HSA-196819 SHELI_v1c07750 9e0bb6c6281b02ee37008882b46a4128 205 Pfam PF04263 Thiamin pyrophosphokinase, catalytic domain 26 117 4.1E-8 T 12-10-2018 IPR007371 Thiamin pyrophosphokinase, catalytic domain GO:0004788|GO:0005524|GO:0009229 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|Reactome: R-HSA-196819 SHELI_v1c07750 9e0bb6c6281b02ee37008882b46a4128 205 TIGRFAM TIGR01378 thi_PPkinase: thiamine pyrophosphokinase 14 197 1.6E-26 T 12-10-2018 IPR006282 Thiamin pyrophosphokinase GO:0004788|GO:0006772 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|Reactome: R-HSA-196819 SHELI_v1c00990 4c4eccecadf22146e43302b818d85fb5 317 Pfam PF00814 Glycoprotease family 23 306 2.6E-91 T 12-10-2018 IPR000905 Gcp-like domain SHELI_v1c00990 4c4eccecadf22146e43302b818d85fb5 317 TIGRFAM TIGR03723 T6A_TsaD_YgjD: tRNA threonylcarbamoyl adenosine modification protein TsaD 3 310 7.3E-120 T 12-10-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 SHELI_v1c00990 4c4eccecadf22146e43302b818d85fb5 317 SUPERFAMILY SSF53067 101 306 8.74E-37 T 12-10-2018 SHELI_v1c00990 4c4eccecadf22146e43302b818d85fb5 317 TIGRFAM TIGR00329 gcp_kae1: metallohydrolase, glycoprotease/Kae1 family 4 306 7.5E-105 T 12-10-2018 IPR017861 Kae1/TsaD family SHELI_v1c00990 4c4eccecadf22146e43302b818d85fb5 317 SUPERFAMILY SSF53067 2 120 1.81E-24 T 12-10-2018 SHELI_v1c00990 4c4eccecadf22146e43302b818d85fb5 317 Gene3D G3DSA:3.30.420.40 127 293 3.8E-108 T 12-10-2018 SHELI_v1c00990 4c4eccecadf22146e43302b818d85fb5 317 Gene3D G3DSA:3.30.420.40 3 308 3.8E-108 T 12-10-2018 SHELI_v1c00990 4c4eccecadf22146e43302b818d85fb5 317 Hamap MF_01445 tRNA N6-adenosine threonylcarbamoyltransferase [tsaD]. 1 317 55.404 T 12-10-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 SHELI_v1c00990 4c4eccecadf22146e43302b818d85fb5 317 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 152 173 8.6E-43 T 12-10-2018 IPR017861 Kae1/TsaD family SHELI_v1c00990 4c4eccecadf22146e43302b818d85fb5 317 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 96 115 8.6E-43 T 12-10-2018 IPR017861 Kae1/TsaD family SHELI_v1c00990 4c4eccecadf22146e43302b818d85fb5 317 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 75 95 8.6E-43 T 12-10-2018 IPR017861 Kae1/TsaD family SHELI_v1c00990 4c4eccecadf22146e43302b818d85fb5 317 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 129 141 8.6E-43 T 12-10-2018 IPR017861 Kae1/TsaD family SHELI_v1c00990 4c4eccecadf22146e43302b818d85fb5 317 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 4 17 8.6E-43 T 12-10-2018 IPR017861 Kae1/TsaD family SHELI_v1c00990 4c4eccecadf22146e43302b818d85fb5 317 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 262 271 8.6E-43 T 12-10-2018 IPR017861 Kae1/TsaD family SHELI_v1c03100 3feb06df630465c648dda6ed1b136e7f 388 SUPERFAMILY SSF46565 2 107 1.83E-34 T 12-10-2018 IPR036869 Chaperone J-domain superfamily SHELI_v1c03100 3feb06df630465c648dda6ed1b136e7f 388 Gene3D G3DSA:2.60.260.20 287 387 2.1E-18 T 12-10-2018 SHELI_v1c03100 3feb06df630465c648dda6ed1b136e7f 388 SMART SM00271 5 62 6.7E-26 T 12-10-2018 IPR001623 DnaJ domain SHELI_v1c03100 3feb06df630465c648dda6ed1b136e7f 388 SUPERFAMILY SSF49493 290 370 2.49E-13 T 12-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 SHELI_v1c03100 3feb06df630465c648dda6ed1b136e7f 388 PRINTS PR00625 DnaJ domain signature 8 26 3.8E-28 T 12-10-2018 IPR001623 DnaJ domain SHELI_v1c03100 3feb06df630465c648dda6ed1b136e7f 388 PRINTS PR00625 DnaJ domain signature 42 62 3.8E-28 T 12-10-2018 IPR001623 DnaJ domain SHELI_v1c03100 3feb06df630465c648dda6ed1b136e7f 388 PRINTS PR00625 DnaJ domain signature 62 81 3.8E-28 T 12-10-2018 IPR001623 DnaJ domain SHELI_v1c03100 3feb06df630465c648dda6ed1b136e7f 388 PRINTS PR00625 DnaJ domain signature 26 41 3.8E-28 T 12-10-2018 IPR001623 DnaJ domain SHELI_v1c03100 3feb06df630465c648dda6ed1b136e7f 388 Pfam PF01556 DnaJ C terminal domain 142 360 3.0E-23 T 12-10-2018 IPR002939 Chaperone DnaJ, C-terminal SHELI_v1c03100 3feb06df630465c648dda6ed1b136e7f 388 Gene3D G3DSA:1.10.287.110 2 131 1.9E-33 T 12-10-2018 IPR036869 Chaperone J-domain superfamily SHELI_v1c03100 3feb06df630465c648dda6ed1b136e7f 388 Pfam PF00226 DnaJ domain 6 67 2.0E-24 T 12-10-2018 IPR001623 DnaJ domain SHELI_v1c03100 3feb06df630465c648dda6ed1b136e7f 388 SUPERFAMILY SSF49493 140 275 3.27E-11 T 12-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 SHELI_v1c03100 3feb06df630465c648dda6ed1b136e7f 388 Gene3D G3DSA:2.10.230.10 168 232 1.6E-30 T 12-10-2018 SHELI_v1c03100 3feb06df630465c648dda6ed1b136e7f 388 Pfam PF00684 DnaJ central domain 168 232 2.7E-13 T 12-10-2018 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 SHELI_v1c03100 3feb06df630465c648dda6ed1b136e7f 388 Hamap MF_01152 Chaperone protein DnaJ [dnaJ]. 3 386 32.837 T 12-10-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 SHELI_v1c03100 3feb06df630465c648dda6ed1b136e7f 388 Gene3D G3DSA:2.60.260.20 138 273 1.6E-30 T 12-10-2018 SHELI_v1c03100 3feb06df630465c648dda6ed1b136e7f 388 SUPERFAMILY SSF57938 155 236 2.75E-18 T 12-10-2018 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily SHELI_v1c02430 cddb306c1846bccf5188770ab78b056f 248 Gene3D G3DSA:3.30.70.1560 124 217 1.9E-42 T 12-10-2018 SHELI_v1c02430 cddb306c1846bccf5188770ab78b056f 248 SUPERFAMILY SSF55174 2 66 7.85E-14 T 12-10-2018 SHELI_v1c02430 cddb306c1846bccf5188770ab78b056f 248 SUPERFAMILY SSF55120 58 239 4.6E-32 T 12-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 SHELI_v1c02430 cddb306c1846bccf5188770ab78b056f 248 Pfam PF01479 S4 domain 2 46 1.2E-13 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SHELI_v1c02430 cddb306c1846bccf5188770ab78b056f 248 SMART SM00363 2 66 1.9E-12 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SHELI_v1c02430 cddb306c1846bccf5188770ab78b056f 248 Gene3D G3DSA:3.30.70.580 65 225 1.9E-42 T 12-10-2018 SHELI_v1c02430 cddb306c1846bccf5188770ab78b056f 248 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 67 228 2.8E-34 T 12-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 SHELI_v1c02430 cddb306c1846bccf5188770ab78b056f 248 Gene3D G3DSA:3.10.290.10 1 64 2.9E-19 T 12-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 SHELI_v1c02430 cddb306c1846bccf5188770ab78b056f 248 Pfam PF00849 RNA pseudouridylate synthase 63 196 1.2E-16 T 12-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 SHELI_v1c11360 3ee9f49d3babfbc8e7e14c92936a86be 345 Gene3D G3DSA:3.40.50.2020 149 302 3.2E-107 T 12-10-2018 SHELI_v1c11360 3ee9f49d3babfbc8e7e14c92936a86be 345 Gene3D G3DSA:3.40.50.2020 10 313 3.2E-107 T 12-10-2018 SHELI_v1c11360 3ee9f49d3babfbc8e7e14c92936a86be 345 SMART SM01400 6 122 2.3E-71 T 12-10-2018 SHELI_v1c11360 3ee9f49d3babfbc8e7e14c92936a86be 345 SUPERFAMILY SSF53271 71 309 5.47E-51 T 12-10-2018 IPR029057 Phosphoribosyltransferase-like SHELI_v1c11360 3ee9f49d3babfbc8e7e14c92936a86be 345 ProSitePatterns PS00114 Phosphoribosyl pyrophosphate synthase signature. 130 145 - T 12-10-2018 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site GO:0000287|GO:0004749|GO:0009156|GO:0044249 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 SHELI_v1c11360 3ee9f49d3babfbc8e7e14c92936a86be 345 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 6 122 7.0E-46 T 12-10-2018 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 SHELI_v1c11360 3ee9f49d3babfbc8e7e14c92936a86be 345 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 6 325 3.4E-105 T 12-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 SHELI_v1c11360 3ee9f49d3babfbc8e7e14c92936a86be 345 Pfam PF14572 Phosphoribosyl synthetase-associated domain 216 325 5.3E-18 T 12-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 SHELI_v1c07650 3c42827f2315ee9971c263cd781a9d58 223 SUPERFAMILY SSF56281 14 201 3.8E-36 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like SHELI_v1c07650 3c42827f2315ee9971c263cd781a9d58 223 Gene3D G3DSA:3.60.15.10 2 222 5.7E-38 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like SHELI_v1c07650 3c42827f2315ee9971c263cd781a9d58 223 Pfam PF00753 Metallo-beta-lactamase superfamily 17 167 1.5E-10 T 12-10-2018 IPR001279 Metallo-beta-lactamase SHELI_v1c07650 3c42827f2315ee9971c263cd781a9d58 223 SMART SM00849 14 198 6.5E-25 T 12-10-2018 IPR001279 Metallo-beta-lactamase SHELI_v1c01720 891fd4adeefecee1d67522b214b79c62 148 Gene3D G3DSA:3.40.630.30 8 147 2.2E-33 T 12-10-2018 SHELI_v1c01720 891fd4adeefecee1d67522b214b79c62 148 SUPERFAMILY SSF55729 7 146 1.99E-31 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase SHELI_v1c01720 891fd4adeefecee1d67522b214b79c62 148 Pfam PF13673 Acetyltransferase (GNAT) domain 28 147 4.4E-19 T 12-10-2018 IPR000182 GNAT domain SHELI_v1c00140 0f3561e92e0965f2281afb09132cedee 286 Gene3D G3DSA:3.55.30.10 1 231 8.9E-60 T 12-10-2018 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 SHELI_v1c00140 0f3561e92e0965f2281afb09132cedee 286 SUPERFAMILY SSF118352 230 285 2.75E-15 T 12-10-2018 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 SHELI_v1c00140 0f3561e92e0965f2281afb09132cedee 286 PIRSF PIRSF005261 1 286 9.3E-66 T 12-10-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 SHELI_v1c00140 0f3561e92e0965f2281afb09132cedee 286 SUPERFAMILY SSF64397 1 237 7.19E-54 T 12-10-2018 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 SHELI_v1c00140 0f3561e92e0965f2281afb09132cedee 286 Pfam PF01430 Hsp33 protein 5 276 6.0E-69 T 12-10-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 SHELI_v1c00140 0f3561e92e0965f2281afb09132cedee 286 Gene3D G3DSA:3.90.1280.10 232 286 4.8E-15 T 12-10-2018 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 SHELI_v1c03360 945129d4c9500e99489ae4c459f88b76 114 Pfam PF02033 Ribosome-binding factor A 8 110 9.4E-25 T 12-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 SHELI_v1c03360 945129d4c9500e99489ae4c459f88b76 114 ProSitePatterns PS01319 Ribosome-binding factor A signature. 76 97 - T 12-10-2018 IPR020053 Ribosome-binding factor A, conserved site GO:0006364 SHELI_v1c03360 945129d4c9500e99489ae4c459f88b76 114 TIGRFAM TIGR00082 rbfA: ribosome-binding factor A 1 114 5.7E-23 T 12-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 SHELI_v1c03360 945129d4c9500e99489ae4c459f88b76 114 Hamap MF_00003 Ribosome-binding factor A [rbfA]. 5 110 22.727 T 12-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 SHELI_v1c03360 945129d4c9500e99489ae4c459f88b76 114 ProDom PD007327 FACTOR A RIBOSOME-BINDING PROCESSING RRNA 3D-STRUCTURE RIBOSOMAL-BINDING PRECURSOR A RBFA 14 97 3.0E-9 T 12-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 SHELI_v1c03360 945129d4c9500e99489ae4c459f88b76 114 SUPERFAMILY SSF89919 2 113 1.57E-26 T 12-10-2018 IPR023799 Ribosome-binding factor A domain superfamily SHELI_v1c03360 945129d4c9500e99489ae4c459f88b76 114 Gene3D G3DSA:3.30.300.20 3 114 2.8E-25 T 12-10-2018 IPR015946 K homology domain-like, alpha/beta SHELI_v1c07220 30b80042000441c7269a59c89fc8eddf 58 TIGRFAM TIGR01031 rpmF_bact: ribosomal protein bL32 2 54 3.4E-24 T 12-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHELI_v1c07220 30b80042000441c7269a59c89fc8eddf 58 Pfam PF01783 Ribosomal L32p protein family 2 55 2.5E-23 T 12-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHELI_v1c07220 30b80042000441c7269a59c89fc8eddf 58 Hamap MF_00340 50S ribosomal protein L32 [rpmF]. 1 55 19.721 T 12-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHELI_v1c07220 30b80042000441c7269a59c89fc8eddf 58 SUPERFAMILY SSF57829 1 56 4.09E-20 T 12-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 SHELI_v1c03070 9d06495bae075e3e1d737535e19798d0 249 Gene3D G3DSA:2.30.22.10 192 249 2.6E-14 T 12-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 SHELI_v1c03070 9d06495bae075e3e1d737535e19798d0 249 Gene3D G3DSA:3.90.20.20 65 190 4.6E-12 T 12-10-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 SHELI_v1c03070 9d06495bae075e3e1d737535e19798d0 249 SUPERFAMILY SSF58014 95 192 3.14E-16 T 12-10-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 SHELI_v1c03070 9d06495bae075e3e1d737535e19798d0 249 SUPERFAMILY SSF51064 198 249 3.01E-12 T 12-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 SHELI_v1c03070 9d06495bae075e3e1d737535e19798d0 249 PRINTS PR00773 GrpE protein signature 118 134 3.2E-14 T 12-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 SHELI_v1c03070 9d06495bae075e3e1d737535e19798d0 249 PRINTS PR00773 GrpE protein signature 201 216 3.2E-14 T 12-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 SHELI_v1c03070 9d06495bae075e3e1d737535e19798d0 249 PRINTS PR00773 GrpE protein signature 146 161 3.2E-14 T 12-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 SHELI_v1c03070 9d06495bae075e3e1d737535e19798d0 249 PRINTS PR00773 GrpE protein signature 228 247 3.2E-14 T 12-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 SHELI_v1c03070 9d06495bae075e3e1d737535e19798d0 249 Pfam PF01025 GrpE 85 249 1.7E-38 T 12-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 SHELI_v1c03070 9d06495bae075e3e1d737535e19798d0 249 Hamap MF_01151 Protein GrpE [grpE]. 58 249 16.412 T 12-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 SHELI_v1c08120 aec64638c9a52e5c3da60547996d0b33 193 Pfam PF01588 Putative tRNA binding domain 86 181 6.9E-12 T 12-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 SHELI_v1c08120 aec64638c9a52e5c3da60547996d0b33 193 Gene3D G3DSA:2.40.50.140 7 181 2.0E-37 T 12-10-2018 SHELI_v1c08120 aec64638c9a52e5c3da60547996d0b33 193 SUPERFAMILY SSF50249 83 190 5.14E-23 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold SHELI_v1c08120 aec64638c9a52e5c3da60547996d0b33 193 Gene3D G3DSA:3.30.1940.10 18 81 2.0E-37 T 12-10-2018 IPR037154 YtpR-like superfamily SHELI_v1c08660 805afe42d46d284175bc4d634c2e79b5 336 ProSitePatterns PS00579 Ribosomal protein L29 signature. 44 58 - T 12-10-2018 IPR018254 Ribosomal protein L29, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SHELI_v1c08660 805afe42d46d284175bc4d634c2e79b5 336 Hamap MF_00374 50S ribosomal protein L29 [rpmC]. 8 65 14.707 T 12-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SHELI_v1c08660 805afe42d46d284175bc4d634c2e79b5 336 TIGRFAM TIGR00012 L29: ribosomal protein uL29 10 65 1.0E-18 T 12-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SHELI_v1c08660 805afe42d46d284175bc4d634c2e79b5 336 Pfam PF00831 Ribosomal L29 protein 10 65 5.0E-19 T 12-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SHELI_v1c08660 805afe42d46d284175bc4d634c2e79b5 336 SUPERFAMILY SSF46561 8 66 2.22E-16 T 12-10-2018 IPR036049 Ribosomal protein L29/L35 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SHELI_v1c08660 805afe42d46d284175bc4d634c2e79b5 336 Gene3D G3DSA:1.20.58.1890 1 69 4.8E-22 T 12-10-2018 SHELI_v1c01140 ac0bf19f22905bd4cca659c9196e1dc9 158 TIGRFAM TIGR00830 PTBA: PTS system, glucose subfamily, IIA component 12 130 6.3E-43 T 12-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 SHELI_v1c01140 ac0bf19f22905bd4cca659c9196e1dc9 158 SUPERFAMILY SSF51261 3 156 2.96E-49 T 12-10-2018 IPR011055 Duplicated hybrid motif SHELI_v1c01140 ac0bf19f22905bd4cca659c9196e1dc9 158 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 11 131 4.0E-47 T 12-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 SHELI_v1c01140 ac0bf19f22905bd4cca659c9196e1dc9 158 ProSitePatterns PS00371 PTS EIIA domains phosphorylation site signature 1. 74 86 - T 12-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 SHELI_v1c01140 ac0bf19f22905bd4cca659c9196e1dc9 158 Gene3D G3DSA:2.70.70.10 3 158 3.2E-57 T 12-10-2018 IPR011055 Duplicated hybrid motif SHELI_v1c02180 2f6bf6144742b6578b62c25de7202eb4 159 PIRSF PIRSF006092 1 159 1.4E-48 T 12-10-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 SHELI_v1c02180 2f6bf6144742b6578b62c25de7202eb4 159 SUPERFAMILY SSF46557 5 78 3.92E-25 T 12-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 SHELI_v1c02180 2f6bf6144742b6578b62c25de7202eb4 159 Gene3D G3DSA:3.10.50.30 79 159 9.4E-23 T 12-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 SHELI_v1c02180 2f6bf6144742b6578b62c25de7202eb4 159 Pfam PF03449 Transcription elongation factor, N-terminal 5 75 6.4E-29 T 12-10-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 SHELI_v1c02180 2f6bf6144742b6578b62c25de7202eb4 159 TIGRFAM TIGR01462 greA: transcription elongation factor GreA 7 158 3.3E-52 T 12-10-2018 IPR006359 Transcription elongation factor GreA GO:0003677|GO:0032784 SHELI_v1c02180 2f6bf6144742b6578b62c25de7202eb4 159 Hamap MF_00105 Transcription elongation factor GreA [greA]. 3 159 29.447 T 12-10-2018 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 SHELI_v1c02180 2f6bf6144742b6578b62c25de7202eb4 159 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 18 49 - T 12-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 SHELI_v1c02180 2f6bf6144742b6578b62c25de7202eb4 159 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 86 159 2.1E-23 T 12-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 SHELI_v1c02180 2f6bf6144742b6578b62c25de7202eb4 159 Gene3D G3DSA:1.10.287.180 2 76 1.2E-27 T 12-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 SHELI_v1c02180 2f6bf6144742b6578b62c25de7202eb4 159 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 124 140 - T 12-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 SHELI_v1c02180 2f6bf6144742b6578b62c25de7202eb4 159 SUPERFAMILY SSF54534 85 158 1.26E-17 T 12-10-2018 SHELI_v1c01070 23759a2f94b961edecc90e86d8d87633 87 SUPERFAMILY SSF55594 1 84 8.11E-25 T 12-10-2018 IPR035895 HPr-like superfamily SHELI_v1c01070 23759a2f94b961edecc90e86d8d87633 87 Pfam PF00381 PTS HPr component phosphorylation site 3 82 1.1E-26 T 12-10-2018 IPR000032 Phosphocarrier protein HPr-like SHELI_v1c01070 23759a2f94b961edecc90e86d8d87633 87 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 1 81 2.9E-30 T 12-10-2018 IPR000032 Phosphocarrier protein HPr-like SHELI_v1c01070 23759a2f94b961edecc90e86d8d87633 87 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 13 20 - T 12-10-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site SHELI_v1c01070 23759a2f94b961edecc90e86d8d87633 87 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 39 54 - T 12-10-2018 IPR002114 Phosphotransferase system, HPr serine phosphorylation site SHELI_v1c01070 23759a2f94b961edecc90e86d8d87633 87 PRINTS PR00107 Phosphocarrier protein signature 38 53 8.1E-20 T 12-10-2018 IPR000032 Phosphocarrier protein HPr-like SHELI_v1c01070 23759a2f94b961edecc90e86d8d87633 87 PRINTS PR00107 Phosphocarrier protein signature 53 70 8.1E-20 T 12-10-2018 IPR000032 Phosphocarrier protein HPr-like SHELI_v1c01070 23759a2f94b961edecc90e86d8d87633 87 PRINTS PR00107 Phosphocarrier protein signature 13 29 8.1E-20 T 12-10-2018 IPR000032 Phosphocarrier protein HPr-like SHELI_v1c01070 23759a2f94b961edecc90e86d8d87633 87 Gene3D G3DSA:3.30.1340.10 2 87 1.5E-32 T 12-10-2018 IPR035895 HPr-like superfamily SHELI_v1c08750 cdbc438f1bfbf1c051f49b53e16541c4 100 SMART SM01403 7 99 2.8E-42 T 12-10-2018 IPR027486 Ribosomal protein S10 domain SHELI_v1c08750 cdbc438f1bfbf1c051f49b53e16541c4 100 TIGRFAM TIGR01049 rpsJ_bact: ribosomal protein uS10 4 99 5.6E-38 T 12-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SHELI_v1c08750 cdbc438f1bfbf1c051f49b53e16541c4 100 Hamap MF_00508 30S ribosomal protein S10 [rpsJ]. 3 100 21.872 T 12-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SHELI_v1c08750 cdbc438f1bfbf1c051f49b53e16541c4 100 PRINTS PR00971 Ribosomal protein S10 family signature 5 18 6.9E-16 T 12-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SHELI_v1c08750 cdbc438f1bfbf1c051f49b53e16541c4 100 PRINTS PR00971 Ribosomal protein S10 family signature 38 53 6.9E-16 T 12-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SHELI_v1c08750 cdbc438f1bfbf1c051f49b53e16541c4 100 PRINTS PR00971 Ribosomal protein S10 family signature 59 73 6.9E-16 T 12-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SHELI_v1c08750 cdbc438f1bfbf1c051f49b53e16541c4 100 Pfam PF00338 Ribosomal protein S10p/S20e 7 99 2.7E-28 T 12-10-2018 IPR027486 Ribosomal protein S10 domain SHELI_v1c08750 cdbc438f1bfbf1c051f49b53e16541c4 100 SUPERFAMILY SSF54999 5 99 1.09E-29 T 12-10-2018 IPR036838 Ribosomal protein S10 domain superfamily SHELI_v1c08750 cdbc438f1bfbf1c051f49b53e16541c4 100 Gene3D G3DSA:3.30.70.600 1 99 1.2E-30 T 12-10-2018 IPR036838 Ribosomal protein S10 domain superfamily SHELI_v1c08580 ea118d535f3281853842a5aadfcedfc1 116 Gene3D G3DSA:3.30.420.100 3 116 2.6E-40 T 12-10-2018 SHELI_v1c08580 ea118d535f3281853842a5aadfcedfc1 116 Hamap MF_01337_B 50S ribosomal protein L18 [rplR]. 4 116 27.69 T 12-10-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHELI_v1c08580 ea118d535f3281853842a5aadfcedfc1 116 TIGRFAM TIGR00060 L18_bact: ribosomal protein uL18 5 116 2.4E-42 T 12-10-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHELI_v1c08580 ea118d535f3281853842a5aadfcedfc1 116 Pfam PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 4 116 2.1E-46 T 12-10-2018 IPR005484 Ribosomal protein L18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHELI_v1c08580 ea118d535f3281853842a5aadfcedfc1 116 SUPERFAMILY SSF53137 5 114 8.72E-49 T 12-10-2018 SHELI_v1c02420 27040b29fd462da933b6e02f5677f1b7 185 Gene3D G3DSA:1.10.10.10 2 86 1.1E-17 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily SHELI_v1c02420 27040b29fd462da933b6e02f5677f1b7 185 SUPERFAMILY SSF46785 89 162 1.74E-19 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily SHELI_v1c02420 27040b29fd462da933b6e02f5677f1b7 185 PIRSF PIRSF019345 1 180 7.2E-51 T 12-10-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 SHELI_v1c02420 27040b29fd462da933b6e02f5677f1b7 185 Pfam PF04079 Segregation and condensation complex subunit ScpB 9 171 2.3E-48 T 12-10-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 SHELI_v1c02420 27040b29fd462da933b6e02f5677f1b7 185 Gene3D G3DSA:1.10.10.10 87 181 8.9E-33 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily SHELI_v1c02420 27040b29fd462da933b6e02f5677f1b7 185 SUPERFAMILY SSF46785 2 83 9.79E-8 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily SHELI_v1c02420 27040b29fd462da933b6e02f5677f1b7 185 TIGRFAM TIGR00281 TIGR00281: segregation and condensation protein B 8 177 2.3E-43 T 12-10-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 SHELI_v1c11580 c7ea2e2d821ccad666dfd6c412a25fef 109 ProSitePatterns PS00648 Bacterial ribonuclease P protein component signature. 50 64 - T 12-10-2018 IPR020539 Ribonuclease P, conserved site GO:0004526 SHELI_v1c11580 c7ea2e2d821ccad666dfd6c412a25fef 109 TIGRFAM TIGR00188 rnpA: ribonuclease P protein component 1 108 4.3E-17 T 12-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 SHELI_v1c11580 c7ea2e2d821ccad666dfd6c412a25fef 109 ProDom PD003629 P RIBONUCLEASE COMPONENT HYDROLASE RNASE C5 RNASEP RNA-BINDING PROCESSING ENDONUCLEASE 7 102 5.0E-18 T 12-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 SHELI_v1c11580 c7ea2e2d821ccad666dfd6c412a25fef 109 Gene3D G3DSA:3.30.230.10 1 109 1.9E-23 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup SHELI_v1c11580 c7ea2e2d821ccad666dfd6c412a25fef 109 Pfam PF00825 Ribonuclease P 1 108 5.1E-24 T 12-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 SHELI_v1c11580 c7ea2e2d821ccad666dfd6c412a25fef 109 Hamap MF_00227 Ribonuclease P protein component [rnpA]. 1 104 13.515 T 12-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 SHELI_v1c11580 c7ea2e2d821ccad666dfd6c412a25fef 109 SUPERFAMILY SSF54211 1 108 1.16E-23 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold SHELI_v1c07050 3b8852f5891fdaa4b45ba63be0c83b0e 304 SUPERFAMILY SSF55174 14 102 1.91E-7 T 12-10-2018 SHELI_v1c07050 3b8852f5891fdaa4b45ba63be0c83b0e 304 Gene3D G3DSA:3.10.290.10 1 71 2.1E-15 T 12-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 SHELI_v1c07050 3b8852f5891fdaa4b45ba63be0c83b0e 304 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 9 302 1.5E-93 T 12-10-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 SHELI_v1c07050 3b8852f5891fdaa4b45ba63be0c83b0e 304 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 135 149 - T 12-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 SHELI_v1c07050 3b8852f5891fdaa4b45ba63be0c83b0e 304 SMART SM00363 13 77 2.1E-4 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SHELI_v1c07050 3b8852f5891fdaa4b45ba63be0c83b0e 304 Gene3D G3DSA:3.30.2350.10 72 291 8.8E-76 T 12-10-2018 SHELI_v1c07050 3b8852f5891fdaa4b45ba63be0c83b0e 304 Pfam PF00849 RNA pseudouridylate synthase 90 243 2.6E-38 T 12-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 SHELI_v1c07050 3b8852f5891fdaa4b45ba63be0c83b0e 304 SUPERFAMILY SSF55120 75 301 1.98E-74 T 12-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 SHELI_v1c00080 8655111741aba1a108735969f624b70d 191 Hamap MF_00017 Recombination protein RecR [recR]. 1 188 50.823 T 12-10-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 SHELI_v1c00080 8655111741aba1a108735969f624b70d 191 Gene3D G3DSA:3.40.1360.10 70 188 6.4E-34 T 12-10-2018 SHELI_v1c00080 8655111741aba1a108735969f624b70d 191 Pfam PF13662 Toprim domain 74 161 1.3E-11 T 12-10-2018 IPR006171 TOPRIM domain SHELI_v1c00080 8655111741aba1a108735969f624b70d 191 SUPERFAMILY SSF111304 2 188 7.06E-49 T 12-10-2018 IPR023627 Recombination protein RecR SHELI_v1c06400 181b7516c6dc66c732eb5d6103625447 76 Gene3D G3DSA:2.40.50.140 1 76 3.2E-19 T 12-10-2018 SHELI_v1c06400 181b7516c6dc66c732eb5d6103625447 76 SUPERFAMILY SSF50249 2 75 3.43E-16 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold SHELI_v1c06400 181b7516c6dc66c732eb5d6103625447 76 SMART SM00316 1 74 4.6E-13 T 12-10-2018 IPR022967 RNA-binding domain, S1 SHELI_v1c06400 181b7516c6dc66c732eb5d6103625447 76 Pfam PF00575 S1 RNA binding domain 2 74 1.5E-10 T 12-10-2018 IPR003029 S1 domain GO:0003676 SHELI_v1c08500 c53887933dd0765274c6fea026ddda8f 121 PIRSF PIRSF002134 1 121 3.3E-42 T 12-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SHELI_v1c08500 c53887933dd0765274c6fea026ddda8f 121 Gene3D G3DSA:4.10.910.10 72 121 2.1E-25 T 12-10-2018 IPR027437 30s ribosomal protein S13, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SHELI_v1c08500 c53887933dd0765274c6fea026ddda8f 121 Gene3D G3DSA:1.10.8.50 1 71 1.8E-28 T 12-10-2018 SHELI_v1c08500 c53887933dd0765274c6fea026ddda8f 121 Pfam PF00416 Ribosomal protein S13/S18 3 108 1.4E-30 T 12-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SHELI_v1c08500 c53887933dd0765274c6fea026ddda8f 121 Hamap MF_01315 30S ribosomal protein S13 [rpsM]. 1 118 25.674 T 12-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SHELI_v1c08500 c53887933dd0765274c6fea026ddda8f 121 TIGRFAM TIGR03631 uS13_bact: ribosomal protein uS13 3 114 2.9E-51 T 12-10-2018 IPR019980 Ribosomal protein S13, bacterial-type GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHELI_v1c08500 c53887933dd0765274c6fea026ddda8f 121 SUPERFAMILY SSF46946 2 120 8.54E-43 T 12-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 SHELI_v1c08500 c53887933dd0765274c6fea026ddda8f 121 ProSitePatterns PS00646 Ribosomal protein S13 signature. 87 100 - T 12-10-2018 IPR018269 Ribosomal protein S13, conserved site GO:0003723|GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SHELI_v1c02040 d2a5d35d18a05848955f6336e68a42d9 177 ProSitePatterns PS00938 Initiation factor 3 signature. 64 77 - T 12-10-2018 IPR019813 Translation initiation factor 3, conserved site GO:0003743|GO:0006413 SHELI_v1c02040 d2a5d35d18a05848955f6336e68a42d9 177 Gene3D G3DSA:3.30.110.10 82 177 1.7E-31 T 12-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 SHELI_v1c02040 d2a5d35d18a05848955f6336e68a42d9 177 SUPERFAMILY SSF54364 11 84 3.79E-19 T 12-10-2018 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily GO:0003743|GO:0006413 Reactome: R-HSA-5368286 SHELI_v1c02040 d2a5d35d18a05848955f6336e68a42d9 177 Pfam PF05198 Translation initiation factor IF-3, N-terminal domain 12 81 8.4E-23 T 12-10-2018 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 Reactome: R-HSA-5368286 SHELI_v1c02040 d2a5d35d18a05848955f6336e68a42d9 177 Hamap MF_00080 Translation initiation factor IF-3 [infC]. 3 176 25.062 T 12-10-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 SHELI_v1c02040 d2a5d35d18a05848955f6336e68a42d9 177 SUPERFAMILY SSF55200 90 175 7.06E-29 T 12-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 SHELI_v1c02040 d2a5d35d18a05848955f6336e68a42d9 177 Gene3D G3DSA:3.10.20.80 7 81 2.2E-22 T 12-10-2018 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily GO:0003743|GO:0006413 Reactome: R-HSA-5368286 SHELI_v1c02040 d2a5d35d18a05848955f6336e68a42d9 177 TIGRFAM TIGR00168 infC: translation initiation factor IF-3 12 175 2.1E-49 T 12-10-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 SHELI_v1c02040 d2a5d35d18a05848955f6336e68a42d9 177 Pfam PF00707 Translation initiation factor IF-3, C-terminal domain 89 174 1.9E-31 T 12-10-2018 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 Reactome: R-HSA-5368286 SHELI_v1c00230 e484b417b4fc12737f1d1818fa688518 73 Hamap MF_00270 30S ribosomal protein S18 [rpsR]. 2 73 21.644 T 12-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHELI_v1c00230 e484b417b4fc12737f1d1818fa688518 73 SUPERFAMILY SSF46911 3 73 4.45E-29 T 12-10-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHELI_v1c00230 e484b417b4fc12737f1d1818fa688518 73 Gene3D G3DSA:4.10.640.10 1 73 1.9E-29 T 12-10-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHELI_v1c00230 e484b417b4fc12737f1d1818fa688518 73 ProDom PD002239 RIBOSOMAL S18 RIBONUCLEOPROTEIN 30S RRNA-BINDING RNA-BINDING CHLOROPLAST PLASTID MITOCHONDRIAL ACETYLATION 20 71 5.0E-20 T 12-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHELI_v1c00230 e484b417b4fc12737f1d1818fa688518 73 Pfam PF01084 Ribosomal protein S18 18 68 5.2E-27 T 12-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHELI_v1c00230 e484b417b4fc12737f1d1818fa688518 73 PRINTS PR00974 Ribosomal protein S18 family signature 60 70 1.2E-17 T 12-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHELI_v1c00230 e484b417b4fc12737f1d1818fa688518 73 PRINTS PR00974 Ribosomal protein S18 family signature 28 38 1.2E-17 T 12-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHELI_v1c00230 e484b417b4fc12737f1d1818fa688518 73 PRINTS PR00974 Ribosomal protein S18 family signature 38 45 1.2E-17 T 12-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHELI_v1c00230 e484b417b4fc12737f1d1818fa688518 73 PRINTS PR00974 Ribosomal protein S18 family signature 46 60 1.2E-17 T 12-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHELI_v1c00230 e484b417b4fc12737f1d1818fa688518 73 TIGRFAM TIGR00165 S18: ribosomal protein bS18 5 73 2.8E-30 T 12-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHELI_v1c08650 4b1f21fa929d22a92a789ceebfb04210 85 Gene3D G3DSA:2.40.50.140 5 84 3.5E-35 T 12-10-2018 SHELI_v1c08650 4b1f21fa929d22a92a789ceebfb04210 85 ProSitePatterns PS00056 Ribosomal protein S17 signature. 57 69 - T 12-10-2018 IPR019979 Ribosomal protein S17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SHELI_v1c08650 4b1f21fa929d22a92a789ceebfb04210 85 Pfam PF00366 Ribosomal protein S17 11 77 2.5E-31 T 12-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHELI_v1c08650 4b1f21fa929d22a92a789ceebfb04210 85 ProDom PD001295 RIBOSOMAL S17 30S RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 40S S11 S17P S11 6 77 1.0E-23 T 12-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHELI_v1c08650 4b1f21fa929d22a92a789ceebfb04210 85 SUPERFAMILY SSF50249 6 83 9.0E-32 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold SHELI_v1c08650 4b1f21fa929d22a92a789ceebfb04210 85 TIGRFAM TIGR03635 uS17_bact: ribosomal protein uS17 6 77 9.7E-35 T 12-10-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHELI_v1c08650 4b1f21fa929d22a92a789ceebfb04210 85 Hamap MF_01345_B 30S ribosomal protein S17 [rpsQ]. 6 81 23.826 T 12-10-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHELI_v1c08650 4b1f21fa929d22a92a789ceebfb04210 85 PRINTS PR00973 Ribosomal protein S17 family signature 57 67 2.8E-12 T 12-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHELI_v1c08650 4b1f21fa929d22a92a789ceebfb04210 85 PRINTS PR00973 Ribosomal protein S17 family signature 67 74 2.8E-12 T 12-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHELI_v1c08650 4b1f21fa929d22a92a789ceebfb04210 85 PRINTS PR00973 Ribosomal protein S17 family signature 25 48 2.8E-12 T 12-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHELI_v1c08590 a091358cc05a50dd892ddb223625cd91 180 Gene3D G3DSA:3.90.930.12 84 180 2.9E-40 T 12-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SHELI_v1c08590 a091358cc05a50dd892ddb223625cd91 180 PRINTS PR00059 Ribosomal protein L6 signature 100 116 3.0E-32 T 12-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 SHELI_v1c08590 a091358cc05a50dd892ddb223625cd91 180 PRINTS PR00059 Ribosomal protein L6 signature 72 97 3.0E-32 T 12-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 SHELI_v1c08590 a091358cc05a50dd892ddb223625cd91 180 PRINTS PR00059 Ribosomal protein L6 signature 142 163 3.0E-32 T 12-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 SHELI_v1c08590 a091358cc05a50dd892ddb223625cd91 180 Pfam PF00347 Ribosomal protein L6 91 165 2.3E-22 T 12-10-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SHELI_v1c08590 a091358cc05a50dd892ddb223625cd91 180 Pfam PF00347 Ribosomal protein L6 11 83 2.7E-17 T 12-10-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SHELI_v1c08590 a091358cc05a50dd892ddb223625cd91 180 Gene3D G3DSA:3.90.930.12 1 83 4.6E-23 T 12-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SHELI_v1c08590 a091358cc05a50dd892ddb223625cd91 180 SUPERFAMILY SSF56053 84 177 1.84E-36 T 12-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SHELI_v1c08590 a091358cc05a50dd892ddb223625cd91 180 PIRSF PIRSF002162 1 178 9.8E-49 T 12-10-2018 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SHELI_v1c08590 a091358cc05a50dd892ddb223625cd91 180 TIGRFAM TIGR03654 L6_bact: ribosomal protein uL6 2 177 1.8E-71 T 12-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 SHELI_v1c08590 a091358cc05a50dd892ddb223625cd91 180 ProSitePatterns PS00525 Ribosomal protein L6 signature 1. 155 163 - T 12-10-2018 IPR002358 Ribosomal protein L6, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHELI_v1c08590 a091358cc05a50dd892ddb223625cd91 180 Hamap MF_01365_B 50S ribosomal protein L6 [rplF]. 1 177 36.444 T 12-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 SHELI_v1c08590 a091358cc05a50dd892ddb223625cd91 180 SUPERFAMILY SSF56053 1 83 6.24E-21 T 12-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SHELI_v1c00850 9fa3b4a737cb22955cf17dfb0b3a79bc 73 Pfam PF01381 Helix-turn-helix 14 68 6.2E-16 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 SHELI_v1c00850 9fa3b4a737cb22955cf17dfb0b3a79bc 73 SMART SM00530 13 68 1.0E-15 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 SHELI_v1c00850 9fa3b4a737cb22955cf17dfb0b3a79bc 73 Gene3D G3DSA:1.10.260.40 1 72 4.7E-22 T 12-10-2018 SHELI_v1c00850 9fa3b4a737cb22955cf17dfb0b3a79bc 73 SUPERFAMILY SSF47413 3 70 3.22E-18 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 SHELI_v1c09590 b872d3f0dfa6f9db46589e5fe8627d5c 504 SUPERFAMILY SSF52540 265 487 4.57E-46 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHELI_v1c09590 b872d3f0dfa6f9db46589e5fe8627d5c 504 SUPERFAMILY SSF52540 16 244 7.35E-53 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHELI_v1c09590 b872d3f0dfa6f9db46589e5fe8627d5c 504 Pfam PF00005 ABC transporter 33 183 2.2E-26 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SHELI_v1c09590 b872d3f0dfa6f9db46589e5fe8627d5c 504 Pfam PF00005 ABC transporter 282 436 4.0E-20 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SHELI_v1c09590 b872d3f0dfa6f9db46589e5fe8627d5c 504 SMART SM00382 42 239 4.6E-9 T 12-10-2018 IPR003593 AAA+ ATPase domain SHELI_v1c09590 b872d3f0dfa6f9db46589e5fe8627d5c 504 SMART SM00382 291 501 0.001 T 12-10-2018 IPR003593 AAA+ ATPase domain SHELI_v1c09590 b872d3f0dfa6f9db46589e5fe8627d5c 504 Gene3D G3DSA:3.40.50.300 2 260 3.2E-51 T 12-10-2018 SHELI_v1c09590 b872d3f0dfa6f9db46589e5fe8627d5c 504 Gene3D G3DSA:3.40.50.300 261 501 1.5E-43 T 12-10-2018 SHELI_v1c09590 b872d3f0dfa6f9db46589e5fe8627d5c 504 ProSitePatterns PS00211 ABC transporters family signature. 409 423 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SHELI_v1c08570 8d6d8f7e38d18fc4f35f28e03d0f00e5 232 SUPERFAMILY SSF54768 63 131 3.24E-23 T 12-10-2018 SHELI_v1c08570 8d6d8f7e38d18fc4f35f28e03d0f00e5 232 SUPERFAMILY SSF54211 135 213 3.79E-27 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold SHELI_v1c08570 8d6d8f7e38d18fc4f35f28e03d0f00e5 232 ProSitePatterns PS00585 Ribosomal protein S5 signature. 83 115 - T 12-10-2018 IPR018192 Ribosomal protein S5, N-terminal, conserved site SHELI_v1c08570 8d6d8f7e38d18fc4f35f28e03d0f00e5 232 Hamap MF_01307_B 30S ribosomal protein S5 [rpsE]. 39 218 36.119 T 12-10-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 SHELI_v1c08570 8d6d8f7e38d18fc4f35f28e03d0f00e5 232 Gene3D G3DSA:3.30.230.10 129 218 1.1E-34 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup SHELI_v1c08570 8d6d8f7e38d18fc4f35f28e03d0f00e5 232 Pfam PF03719 Ribosomal protein S5, C-terminal domain 142 212 7.9E-32 T 12-10-2018 IPR005324 Ribosomal protein S5, C-terminal GO:0003735|GO:0005840|GO:0006412 SHELI_v1c08570 8d6d8f7e38d18fc4f35f28e03d0f00e5 232 TIGRFAM TIGR01021 rpsE_bact: ribosomal protein uS5 65 214 2.6E-67 T 12-10-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 SHELI_v1c08570 8d6d8f7e38d18fc4f35f28e03d0f00e5 232 Gene3D G3DSA:3.30.160.20 57 128 4.1E-31 T 12-10-2018 SHELI_v1c08570 8d6d8f7e38d18fc4f35f28e03d0f00e5 232 Pfam PF00333 Ribosomal protein S5, N-terminal domain 66 130 4.4E-30 T 12-10-2018 IPR013810 Ribosomal protein S5, N-terminal GO:0003723|GO:0003735|GO:0005840|GO:0006412 SHELI_v1c02360 b08bed0ca13fc1d11f68668114e00f53 181 Pfam PF01765 Ribosome recycling factor 24 179 2.4E-53 T 12-10-2018 IPR023584 Ribosome recycling factor domain Reactome: R-HSA-5419276 SHELI_v1c02360 b08bed0ca13fc1d11f68668114e00f53 181 Hamap MF_00040 Ribosome-recycling factor [frr]. 3 181 23.449 T 12-10-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 SHELI_v1c02360 b08bed0ca13fc1d11f68668114e00f53 181 Gene3D G3DSA:3.30.1360.40 31 105 2.3E-55 T 12-10-2018 SHELI_v1c02360 b08bed0ca13fc1d11f68668114e00f53 181 TIGRFAM TIGR00496 frr: ribosome recycling factor 12 181 5.2E-56 T 12-10-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 SHELI_v1c02360 b08bed0ca13fc1d11f68668114e00f53 181 Gene3D G3DSA:1.10.132.20 12 178 2.3E-55 T 12-10-2018 SHELI_v1c02360 b08bed0ca13fc1d11f68668114e00f53 181 SUPERFAMILY SSF55194 1 180 1.03E-56 T 12-10-2018 IPR036191 RRF superfamily Reactome: R-HSA-5419276 SHELI_v1c11060 11752c5649e0b75e0c58e1e0eab17ab4 95 PRINTS PR01249 Ribosomal protein L31 signature 48 66 1.7E-18 T 12-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHELI_v1c11060 11752c5649e0b75e0c58e1e0eab17ab4 95 PRINTS PR01249 Ribosomal protein L31 signature 3 20 1.7E-18 T 12-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHELI_v1c11060 11752c5649e0b75e0c58e1e0eab17ab4 95 PRINTS PR01249 Ribosomal protein L31 signature 33 48 1.7E-18 T 12-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHELI_v1c11060 11752c5649e0b75e0c58e1e0eab17ab4 95 TIGRFAM TIGR00105 L31: ribosomal protein bL31 3 67 9.6E-25 T 12-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHELI_v1c11060 11752c5649e0b75e0c58e1e0eab17ab4 95 Pfam PF01197 Ribosomal protein L31 3 66 1.1E-26 T 12-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHELI_v1c11060 11752c5649e0b75e0c58e1e0eab17ab4 95 Hamap MF_00501 50S ribosomal protein L31 [rpmE]. 2 70 26.066 T 12-10-2018 IPR027491 Ribosomal protein L31 type A GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHELI_v1c11060 11752c5649e0b75e0c58e1e0eab17ab4 95 ProSitePatterns PS01143 Ribosomal protein L31 signature. 37 58 - T 12-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHELI_v1c11060 11752c5649e0b75e0c58e1e0eab17ab4 95 SUPERFAMILY SSF143800 3 66 9.02E-23 T 12-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHELI_v1c11060 11752c5649e0b75e0c58e1e0eab17ab4 95 Gene3D G3DSA:2.30.170.50 2 71 1.6E-26 T 12-10-2018 SHELI_v1c04830 f365e34e94e024a42cd127d27f4a1192 223 SUPERFAMILY SSF52540 2 208 2.07E-41 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHELI_v1c04830 f365e34e94e024a42cd127d27f4a1192 223 Gene3D G3DSA:3.40.50.300 1 223 1.1E-40 T 12-10-2018 SHELI_v1c04830 f365e34e94e024a42cd127d27f4a1192 223 SMART SM00382 25 201 8.1E-10 T 12-10-2018 IPR003593 AAA+ ATPase domain SHELI_v1c04830 f365e34e94e024a42cd127d27f4a1192 223 Pfam PF00005 ABC transporter 18 154 2.4E-19 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SHELI_v1c08690 fb1c21cd11dc70f3807748e15d7bb7dd 111 Gene3D G3DSA:3.90.470.10 1 111 1.3E-47 T 12-10-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 SHELI_v1c08690 fb1c21cd11dc70f3807748e15d7bb7dd 111 ProSitePatterns PS00464 Ribosomal protein L22 signature. 83 107 - T 12-10-2018 IPR018260 Ribosomal protein L22/L17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SHELI_v1c08690 fb1c21cd11dc70f3807748e15d7bb7dd 111 Pfam PF00237 Ribosomal protein L22p/L17e 5 107 3.0E-37 T 12-10-2018 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 SHELI_v1c08690 fb1c21cd11dc70f3807748e15d7bb7dd 111 TIGRFAM TIGR01044 rplV_bact: ribosomal protein uL22 5 107 1.9E-39 T 12-10-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHELI_v1c08690 fb1c21cd11dc70f3807748e15d7bb7dd 111 SUPERFAMILY SSF54843 1 109 1.22E-42 T 12-10-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 SHELI_v1c08690 fb1c21cd11dc70f3807748e15d7bb7dd 111 Hamap MF_01331_B 50S ribosomal protein L22 [rplV]. 1 110 28.631 T 12-10-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHELI_v1c02620 060ef2725d06ed77485076b548f258b7 161 Gene3D G3DSA:3.40.1350.10 7 160 1.1E-34 T 12-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 SHELI_v1c02620 060ef2725d06ed77485076b548f258b7 161 SUPERFAMILY SSF52980 8 157 8.18E-35 T 12-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 SHELI_v1c02620 060ef2725d06ed77485076b548f258b7 161 Pfam PF03838 Recombination protein U 6 153 4.5E-37 T 12-10-2018 IPR004612 Holliday junction resolvase RecU GO:0005737|GO:0006281|GO:0006310 SHELI_v1c11350 524ab34a5be24c45f3f3ec8f47570e15 187 SUPERFAMILY SSF53178 1 187 1.31E-65 T 12-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 SHELI_v1c11350 524ab34a5be24c45f3f3ec8f47570e15 187 ProSitePatterns PS01196 Peptidyl-tRNA hydrolase signature 2. 108 118 - T 12-10-2018 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 SHELI_v1c11350 524ab34a5be24c45f3f3ec8f47570e15 187 Gene3D G3DSA:3.40.50.1470 2 187 8.7E-69 T 12-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 SHELI_v1c11350 524ab34a5be24c45f3f3ec8f47570e15 187 ProSitePatterns PS01195 Peptidyl-tRNA hydrolase signature 1. 15 28 - T 12-10-2018 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 SHELI_v1c11350 524ab34a5be24c45f3f3ec8f47570e15 187 Pfam PF01195 Peptidyl-tRNA hydrolase 4 187 1.7E-58 T 12-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 SHELI_v1c11350 524ab34a5be24c45f3f3ec8f47570e15 187 Hamap MF_00083 Peptidyl-tRNA hydrolase [pth]. 2 179 34.566 T 12-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 SHELI_v1c11350 524ab34a5be24c45f3f3ec8f47570e15 187 TIGRFAM TIGR00447 pth: aminoacyl-tRNA hydrolase 3 187 6.7E-63 T 12-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 SHELI_v1c02930 28dac4e560f28b0cc594653eb53992ce 154 TIGRFAM TIGR01024 rplS_bact: ribosomal protein bL19 11 116 3.5E-44 T 12-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHELI_v1c02930 28dac4e560f28b0cc594653eb53992ce 154 Pfam PF01245 Ribosomal protein L19 10 115 1.1E-44 T 12-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHELI_v1c02930 28dac4e560f28b0cc594653eb53992ce 154 Hamap MF_00402 50S ribosomal protein L19 [rplS]. 2 117 29.204 T 12-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHELI_v1c02930 28dac4e560f28b0cc594653eb53992ce 154 Gene3D G3DSA:2.30.30.790 3 121 4.2E-14 T 12-10-2018 IPR038657 Ribosomal protein L19 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHELI_v1c02930 28dac4e560f28b0cc594653eb53992ce 154 SUPERFAMILY SSF50104 8 121 9.03E-41 T 12-10-2018 IPR008991 Translation protein SH3-like domain superfamily SHELI_v1c02930 28dac4e560f28b0cc594653eb53992ce 154 PIRSF PIRSF002191 1 142 1.4E-48 T 12-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHELI_v1c02930 28dac4e560f28b0cc594653eb53992ce 154 ProSitePatterns PS01015 Ribosomal protein L19 signature. 89 104 - T 12-10-2018 IPR018257 Ribosomal protein L19, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHELI_v1c02930 28dac4e560f28b0cc594653eb53992ce 154 PRINTS PR00061 Ribosomal protein L19 signature 7 36 1.9E-35 T 12-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHELI_v1c02930 28dac4e560f28b0cc594653eb53992ce 154 PRINTS PR00061 Ribosomal protein L19 signature 91 116 1.9E-35 T 12-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHELI_v1c02930 28dac4e560f28b0cc594653eb53992ce 154 PRINTS PR00061 Ribosomal protein L19 signature 37 66 1.9E-35 T 12-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHELI_v1c06050 c718b3ad722e9cfc13952774d406a76b 330 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 2 119 3.1E-22 T 12-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 SHELI_v1c06050 c718b3ad722e9cfc13952774d406a76b 330 SUPERFAMILY SSF51735 2 133 3.38E-32 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily SHELI_v1c06050 c718b3ad722e9cfc13952774d406a76b 330 Gene3D G3DSA:3.30.360.10 130 321 5.5E-32 T 12-10-2018 SHELI_v1c06050 c718b3ad722e9cfc13952774d406a76b 330 SUPERFAMILY SSF55347 162 291 1.64E-12 T 12-10-2018 SHELI_v1c06050 c718b3ad722e9cfc13952774d406a76b 330 Gene3D G3DSA:3.40.50.720 1 124 8.5E-28 T 12-10-2018 SHELI_v1c02640 12b0525b1a00a034faa4c987ad0344cb 151 Pfam PF02464 Competence-damaged protein 4 145 2.7E-33 T 12-10-2018 IPR008136 CinA, C-terminal SHELI_v1c02640 12b0525b1a00a034faa4c987ad0344cb 151 Gene3D G3DSA:3.90.950.20 1 151 8.6E-36 T 12-10-2018 IPR036653 CinA-like, C-terminal SHELI_v1c02640 12b0525b1a00a034faa4c987ad0344cb 151 SUPERFAMILY SSF142433 3 148 1.83E-36 T 12-10-2018 IPR036653 CinA-like, C-terminal SHELI_v1c02640 12b0525b1a00a034faa4c987ad0344cb 151 TIGRFAM TIGR00199 PncC_domain: amidohydrolase, PncC family 7 146 6.3E-30 T 12-10-2018 IPR008136 CinA, C-terminal SHELI_v1c00390 01320109dccbc8a004c85a15455b27ec 144 SMART SM00649 9 136 1.1E-57 T 12-10-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 SHELI_v1c00390 01320109dccbc8a004c85a15455b27ec 144 ProSitePatterns PS00359 Ribosomal protein L11 signature. 122 137 - T 12-10-2018 IPR020785 Ribosomal protein L11, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SHELI_v1c00390 01320109dccbc8a004c85a15455b27ec 144 Pfam PF00298 Ribosomal protein L11, RNA binding domain 67 135 4.6E-22 T 12-10-2018 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 SHELI_v1c00390 01320109dccbc8a004c85a15455b27ec 144 ProDom PD001367 RIBOSOMAL RIBONUCLEOPROTEIN L11 RRNA-BINDING RNA-BINDING METHYLATION 50S L11 BACTERIAL CHLOROPLAST 34 68 2.0E-12 T 12-10-2018 SHELI_v1c00390 01320109dccbc8a004c85a15455b27ec 144 SUPERFAMILY SSF46906 63 135 3.27E-23 T 12-10-2018 IPR036769 Ribosomal protein L11, C-terminal domain superfamily SHELI_v1c00390 01320109dccbc8a004c85a15455b27ec 144 Hamap MF_00736 50S ribosomal protein L11 [rplK]. 5 137 24.632 T 12-10-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 SHELI_v1c00390 01320109dccbc8a004c85a15455b27ec 144 Gene3D G3DSA:3.30.1550.10 2 67 9.0E-19 T 12-10-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily SHELI_v1c00390 01320109dccbc8a004c85a15455b27ec 144 TIGRFAM TIGR01632 L11_bact: ribosomal protein uL11 3 136 1.1E-48 T 12-10-2018 IPR006519 Ribosomal protein L11, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHELI_v1c00390 01320109dccbc8a004c85a15455b27ec 144 Gene3D G3DSA:1.10.10.2720 68 143 4.3E-26 T 12-10-2018 SHELI_v1c00390 01320109dccbc8a004c85a15455b27ec 144 SUPERFAMILY SSF54747 3 67 4.97E-17 T 12-10-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily SHELI_v1c00390 01320109dccbc8a004c85a15455b27ec 144 Pfam PF03946 Ribosomal protein L11, N-terminal domain 10 62 2.5E-15 T 12-10-2018 IPR020784 Ribosomal protein L11, N-terminal SHELI_v1c02100 63a4afd6d9a11428d5e69efda7e706b6 267 SUPERFAMILY SSF111331 26 257 2.62E-41 T 12-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily SHELI_v1c02100 63a4afd6d9a11428d5e69efda7e706b6 267 Gene3D G3DSA:3.40.50.10330 20 248 5.4E-59 T 12-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 SHELI_v1c02100 63a4afd6d9a11428d5e69efda7e706b6 267 Pfam PF01513 ATP-NAD kinase 40 241 1.0E-17 T 12-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 SHELI_v1c02100 63a4afd6d9a11428d5e69efda7e706b6 267 Gene3D G3DSA:2.60.200.30 104 235 5.4E-59 T 12-10-2018 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal GO:0003951|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 SHELI_v1c02120 a11193fd8902a5dd3b72388e43a39c27 101 Gene3D G3DSA:3.40.250.10 1 101 8.9E-20 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily SHELI_v1c02120 a11193fd8902a5dd3b72388e43a39c27 101 Pfam PF00581 Rhodanese-like domain 5 98 3.9E-14 T 12-10-2018 IPR001763 Rhodanese-like domain SHELI_v1c02120 a11193fd8902a5dd3b72388e43a39c27 101 SUPERFAMILY SSF52821 3 97 7.86E-22 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily SHELI_v1c02120 a11193fd8902a5dd3b72388e43a39c27 101 SMART SM00450 4 101 1.4E-11 T 12-10-2018 IPR001763 Rhodanese-like domain SHELI_v1c08520 c4c9ecce5d9bdad7b76ed71935805242 75 Pfam PF01176 Translation initiation factor 1A / IF-1 8 70 6.3E-25 T 12-10-2018 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 SHELI_v1c08520 c4c9ecce5d9bdad7b76ed71935805242 75 SUPERFAMILY SSF50249 1 71 1.0E-25 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold SHELI_v1c08520 c4c9ecce5d9bdad7b76ed71935805242 75 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 3 70 2.8E-35 T 12-10-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 SHELI_v1c08520 c4c9ecce5d9bdad7b76ed71935805242 75 SMART SM00316 4 72 5.6E-4 T 12-10-2018 IPR022967 RNA-binding domain, S1 SHELI_v1c08520 c4c9ecce5d9bdad7b76ed71935805242 75 Hamap MF_00075 Translation initiation factor IF-1 [infA]. 1 72 25.516 T 12-10-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 SHELI_v1c08520 c4c9ecce5d9bdad7b76ed71935805242 75 Gene3D G3DSA:2.40.50.140 1 72 8.1E-34 T 12-10-2018 SHELI_v1c10430 a510477a39f85fe35e996f14fea600c4 266 Pfam PF01874 ATP:dephospho-CoA triphosphoribosyl transferase 8 261 6.1E-42 T 12-10-2018 IPR002736 Triphosphoribosyl-dephospho-CoA protein GO:0005524|GO:0016310|GO:0046917 MetaCyc: PWY-5796 SHELI_v1c08720 dbfb92b9c1b23fd055cc7bcbaf3ee17b 94 Gene3D G3DSA:3.30.70.330 1 94 2.6E-33 T 12-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily SHELI_v1c08720 dbfb92b9c1b23fd055cc7bcbaf3ee17b 94 ProSitePatterns PS00050 Ribosomal protein L23 signature. 76 91 - T 12-10-2018 IPR001014 Ribosomal protein L23/L25, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SHELI_v1c08720 dbfb92b9c1b23fd055cc7bcbaf3ee17b 94 SUPERFAMILY SSF54189 1 91 5.76E-30 T 12-10-2018 IPR012678 Ribosomal protein L23/L15e core domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHELI_v1c08720 dbfb92b9c1b23fd055cc7bcbaf3ee17b 94 Hamap MF_01369_B 50S ribosomal protein L23 [rplW]. 4 93 20.763 T 12-10-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 SHELI_v1c08720 dbfb92b9c1b23fd055cc7bcbaf3ee17b 94 Pfam PF00276 Ribosomal protein L23 5 90 9.6E-31 T 12-10-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 SHELI_v1c00820 905c95760ad237135275e1cc13a07db6 310 Gene3D G3DSA:3.50.50.60 119 241 6.8E-97 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily SHELI_v1c00820 905c95760ad237135275e1cc13a07db6 310 TIGRFAM TIGR01292 TRX_reduct: thioredoxin-disulfide reductase 9 306 4.9E-104 T 12-10-2018 IPR005982 Thioredoxin reductase GO:0004791|GO:0005737|GO:0019430|GO:0055114 KEGG: 00450+1.8.1.9 SHELI_v1c00820 905c95760ad237135275e1cc13a07db6 310 SUPERFAMILY SSF51905 6 306 2.53E-49 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily SHELI_v1c00820 905c95760ad237135275e1cc13a07db6 310 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 9 295 4.8E-42 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHELI_v1c00820 905c95760ad237135275e1cc13a07db6 310 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 107 125 1.1E-29 T 12-10-2018 SHELI_v1c00820 905c95760ad237135275e1cc13a07db6 310 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 233 249 1.1E-29 T 12-10-2018 SHELI_v1c00820 905c95760ad237135275e1cc13a07db6 310 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 149 167 1.1E-29 T 12-10-2018 SHELI_v1c00820 905c95760ad237135275e1cc13a07db6 310 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 11 30 1.1E-29 T 12-10-2018 SHELI_v1c00820 905c95760ad237135275e1cc13a07db6 310 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 259 281 1.1E-29 T 12-10-2018 SHELI_v1c00820 905c95760ad237135275e1cc13a07db6 310 Gene3D G3DSA:3.50.50.60 10 301 6.8E-97 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily SHELI_v1c00820 905c95760ad237135275e1cc13a07db6 310 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 108 116 2.3E-61 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SHELI_v1c00820 905c95760ad237135275e1cc13a07db6 310 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 63 73 2.3E-61 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SHELI_v1c00820 905c95760ad237135275e1cc13a07db6 310 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 10 32 2.3E-61 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SHELI_v1c00820 905c95760ad237135275e1cc13a07db6 310 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 43 58 2.3E-61 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SHELI_v1c00820 905c95760ad237135275e1cc13a07db6 310 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 235 256 2.3E-61 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SHELI_v1c00820 905c95760ad237135275e1cc13a07db6 310 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 130 142 2.3E-61 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SHELI_v1c00820 905c95760ad237135275e1cc13a07db6 310 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 145 169 2.3E-61 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SHELI_v1c00820 905c95760ad237135275e1cc13a07db6 310 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 197 213 2.3E-61 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SHELI_v1c00820 905c95760ad237135275e1cc13a07db6 310 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 269 287 2.3E-61 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SHELI_v1c06730 987257def55bcf8e3ed2e9dfb8c4b3cf 135 TIGRFAM TIGR01354 cyt_deam_tetra: cytidine deaminase 5 131 4.3E-39 T 12-10-2018 IPR006262 Cytidine deaminase, homotetrameric GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199|Reactome: R-HSA-6798695|Reactome: R-HSA-73614 SHELI_v1c06730 987257def55bcf8e3ed2e9dfb8c4b3cf 135 Gene3D G3DSA:3.40.140.10 1 134 1.1E-38 T 12-10-2018 SHELI_v1c06730 987257def55bcf8e3ed2e9dfb8c4b3cf 135 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 53 95 - T 12-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 SHELI_v1c06730 987257def55bcf8e3ed2e9dfb8c4b3cf 135 SUPERFAMILY SSF53927 5 132 2.48E-36 T 12-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 SHELI_v1c06730 987257def55bcf8e3ed2e9dfb8c4b3cf 135 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 3 98 2.6E-15 T 12-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain SHELI_v1c00580 5fa8f4a68feda995ea47c75f2069fa63 140 TIGRFAM TIGR01120 rpiB: ribose 5-phosphate isomerase B 3 140 4.3E-49 T 12-10-2018 IPR004785 Ribose 5-phosphate isomerase B GO:0004751|GO:0006098 SHELI_v1c00580 5fa8f4a68feda995ea47c75f2069fa63 140 Pfam PF02502 Ribose/Galactose Isomerase 3 140 8.8E-55 T 12-10-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 SHELI_v1c00580 5fa8f4a68feda995ea47c75f2069fa63 140 PIRSF PIRSF005384 1 140 6.1E-57 T 12-10-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 SHELI_v1c00580 5fa8f4a68feda995ea47c75f2069fa63 140 SUPERFAMILY SSF89623 2 140 2.49E-53 T 12-10-2018 IPR036569 Sugar-phosphate isomerase, RpiB/LacA/LacB superfamily GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 SHELI_v1c00580 5fa8f4a68feda995ea47c75f2069fa63 140 TIGRFAM TIGR00689 rpiB_lacA_lacB: sugar-phosphate isomerase, RpiB/LacA/LacB family 3 140 1.3E-55 T 12-10-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 SHELI_v1c00580 5fa8f4a68feda995ea47c75f2069fa63 140 Gene3D G3DSA:3.40.1400.10 1 140 8.5E-57 T 12-10-2018 IPR036569 Sugar-phosphate isomerase, RpiB/LacA/LacB superfamily GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 SHELI_v1c03340 f054d22cb60ae6cb920a569a2ff51456 102 Gene3D G3DSA:3.30.1330.30 2 99 3.6E-24 T 12-10-2018 IPR029064 50S ribosomal protein L30e-like SHELI_v1c03340 f054d22cb60ae6cb920a569a2ff51456 102 SUPERFAMILY SSF55315 3 98 5.65E-15 T 12-10-2018 IPR029064 50S ribosomal protein L30e-like SHELI_v1c03340 f054d22cb60ae6cb920a569a2ff51456 102 Pfam PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family 4 86 5.8E-5 T 12-10-2018 IPR004038 Ribosomal protein L7Ae/L30e/S12e/Gadd45 SHELI_v1c11200 5524606e699d27ceb9e63c17234afd97 161 SUPERFAMILY SSF69765 1 136 1.23E-31 T 12-10-2018 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 SHELI_v1c11200 5524606e699d27ceb9e63c17234afd97 161 Pfam PF02542 YgbB family 2 137 2.4E-31 T 12-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 SHELI_v1c11200 5524606e699d27ceb9e63c17234afd97 161 Gene3D G3DSA:3.30.1330.50 1 151 2.1E-34 T 12-10-2018 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 SHELI_v1c02590 55000a9518182d6d1a1658eb2e872f33 334 SUPERFAMILY SSF51735 5 180 6.69E-43 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily SHELI_v1c02590 55000a9518182d6d1a1658eb2e872f33 334 SUPERFAMILY SSF48179 183 329 6.97E-42 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 SHELI_v1c02590 55000a9518182d6d1a1658eb2e872f33 334 Pfam PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 5 160 7.4E-35 T 12-10-2018 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GO:0016616|GO:0046168|GO:0051287|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 SHELI_v1c02590 55000a9518182d6d1a1658eb2e872f33 334 Gene3D G3DSA:1.10.1040.10 193 333 2.0E-38 T 12-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 SHELI_v1c02590 55000a9518182d6d1a1658eb2e872f33 334 Pfam PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 184 323 6.1E-41 T 12-10-2018 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal GO:0004367|GO:0005975|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 SHELI_v1c02590 55000a9518182d6d1a1658eb2e872f33 334 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 202 226 6.7E-28 T 12-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 SHELI_v1c02590 55000a9518182d6d1a1658eb2e872f33 334 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 58 85 6.7E-28 T 12-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 SHELI_v1c02590 55000a9518182d6d1a1658eb2e872f33 334 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 8 25 6.7E-28 T 12-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 SHELI_v1c02590 55000a9518182d6d1a1658eb2e872f33 334 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 137 157 6.7E-28 T 12-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 SHELI_v1c02590 55000a9518182d6d1a1658eb2e872f33 334 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 177 201 6.7E-28 T 12-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 SHELI_v1c02590 55000a9518182d6d1a1658eb2e872f33 334 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 242 259 6.7E-28 T 12-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 SHELI_v1c02590 55000a9518182d6d1a1658eb2e872f33 334 PIRSF PIRSF000114 1 333 9.2E-95 T 12-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 SHELI_v1c02590 55000a9518182d6d1a1658eb2e872f33 334 Gene3D G3DSA:3.40.50.720 1 191 4.6E-49 T 12-10-2018 SHELI_v1c02590 55000a9518182d6d1a1658eb2e872f33 334 Hamap MF_00394 Glycerol-3-phosphate dehydrogenase [NAD(P)+] [gpsA]. 4 326 26.976 T 12-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 SHELI_v1c02260 48e0d75acf6ecec83cbac88f8fe3fdf0 103 Gene3D G3DSA:3.30.70.1490 1 101 1.1E-21 T 12-10-2018 IPR036764 Cysteine protease Prp superfamily SHELI_v1c02260 48e0d75acf6ecec83cbac88f8fe3fdf0 103 Pfam PF04327 Cysteine protease Prp 1 98 6.4E-23 T 12-10-2018 IPR007422 Cysteine protease Prp SHELI_v1c02260 48e0d75acf6ecec83cbac88f8fe3fdf0 103 SUPERFAMILY SSF118010 1 100 8.89E-23 T 12-10-2018 IPR036764 Cysteine protease Prp superfamily SHELI_v1c04790 0df1fd3f62784fcdf8bcc898cfc91d05 242 Pfam PF00005 ABC transporter 19 158 6.4E-27 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SHELI_v1c04790 0df1fd3f62784fcdf8bcc898cfc91d05 242 SMART SM00382 26 205 7.5E-10 T 12-10-2018 IPR003593 AAA+ ATPase domain SHELI_v1c04790 0df1fd3f62784fcdf8bcc898cfc91d05 242 Gene3D G3DSA:3.40.50.300 1 229 1.6E-49 T 12-10-2018 SHELI_v1c04790 0df1fd3f62784fcdf8bcc898cfc91d05 242 ProSitePatterns PS00211 ABC transporters family signature. 130 144 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SHELI_v1c04790 0df1fd3f62784fcdf8bcc898cfc91d05 242 SUPERFAMILY SSF52540 2 210 1.58E-48 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHELI_v1c07390 461eb997e27a5d5014d025a7d97ce3dd 79 ProDom PD002830 NIFU NIFU NITROGEN-FIXING C-TERMINAL FIXATION NITROGEN NIFU-LIKE DOMAIN CLUSTER HESB/YADR/YFHF:NITROGEN-FIXING 14 69 1.0E-9 T 12-10-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 SHELI_v1c07390 461eb997e27a5d5014d025a7d97ce3dd 79 SUPERFAMILY SSF117916 2 71 1.53E-19 T 12-10-2018 IPR034904 Fe-S cluster assembly domain superfamily SHELI_v1c07390 461eb997e27a5d5014d025a7d97ce3dd 79 Pfam PF01106 NifU-like domain 10 72 7.7E-20 T 12-10-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 SHELI_v1c07390 461eb997e27a5d5014d025a7d97ce3dd 79 Gene3D G3DSA:3.30.300.130 1 79 1.3E-20 T 12-10-2018 IPR034904 Fe-S cluster assembly domain superfamily SHELI_v1c11410 f8770adefb17755d650862510c61a67f 268 Gene3D G3DSA:3.40.50.150 3 194 2.6E-61 T 12-10-2018 SHELI_v1c11410 f8770adefb17755d650862510c61a67f 268 Hamap MF_00607 Ribosomal RNA small subunit methyltransferase A [rsmA]. 2 264 48.788 T 12-10-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 SHELI_v1c11410 f8770adefb17755d650862510c61a67f 268 TIGRFAM TIGR00755 ksgA: ribosomal RNA small subunit methyltransferase A 4 262 3.1E-76 T 12-10-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 SHELI_v1c11410 f8770adefb17755d650862510c61a67f 268 Gene3D G3DSA:1.10.8.100 196 267 3.1E-17 T 12-10-2018 IPR023165 rRNA adenine dimethylase-like Reactome: R-HSA-2151201|Reactome: R-HSA-6793080 SHELI_v1c11410 f8770adefb17755d650862510c61a67f 268 SUPERFAMILY SSF53335 2 264 1.56E-66 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHELI_v1c11410 f8770adefb17755d650862510c61a67f 268 SMART SM00650 18 192 1.5E-53 T 12-10-2018 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 SHELI_v1c11410 f8770adefb17755d650862510c61a67f 268 Pfam PF00398 Ribosomal RNA adenine dimethylase 4 263 8.8E-54 T 12-10-2018 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm SHELI_v1c11410 f8770adefb17755d650862510c61a67f 268 ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. 34 61 - T 12-10-2018 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GO:0000154|GO:0000179|GO:0008649 SHELI_v1c01870 427702d74333a5d05f4795d778f135b8 140 SMART SM00732 2 105 6.8E-22 T 12-10-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 SHELI_v1c01870 427702d74333a5d05f4795d778f135b8 140 Gene3D G3DSA:3.30.420.140 1 140 9.2E-37 T 12-10-2018 IPR037027 YqgF/RNase H-like domain superfamily GO:0006139 SHELI_v1c01870 427702d74333a5d05f4795d778f135b8 140 TIGRFAM TIGR00250 RNAse_H_YqgF: putative transcription antitermination factor YqgF 5 137 6.2E-25 T 12-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 SHELI_v1c01870 427702d74333a5d05f4795d778f135b8 140 Pfam PF03652 Holliday junction resolvase 3 137 7.8E-32 T 12-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 SHELI_v1c01870 427702d74333a5d05f4795d778f135b8 140 SUPERFAMILY SSF53098 3 138 2.12E-32 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily SHELI_v1c01870 427702d74333a5d05f4795d778f135b8 140 Hamap MF_00651 Putative pre-16S rRNA nuclease [yqgF]. 2 140 20.428 T 12-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 SHELI_v1c05990 c2ae4c9728f8e23dc7507a71d5c406fd 54 Hamap MF_00358 30S ribosomal protein S21 [rpsU]. 1 52 16.219 T 12-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHELI_v1c05990 c2ae4c9728f8e23dc7507a71d5c406fd 54 TIGRFAM TIGR00030 S21p: ribosomal protein bS21 3 52 1.2E-10 T 12-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHELI_v1c05990 c2ae4c9728f8e23dc7507a71d5c406fd 54 Pfam PF01165 Ribosomal protein S21 3 52 1.7E-9 T 12-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHELI_v1c08480 c1da39f786dff0c62fa3843b43ad3d1e 317 Pfam PF01000 RNA polymerase Rpb3/RpoA insert domain 61 157 3.5E-20 T 12-10-2018 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SHELI_v1c08480 c1da39f786dff0c62fa3843b43ad3d1e 317 SUPERFAMILY SSF56553 50 176 7.72E-33 T 12-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SHELI_v1c08480 c1da39f786dff0c62fa3843b43ad3d1e 317 Gene3D G3DSA:1.10.150.20 224 317 1.6E-26 T 12-10-2018 SHELI_v1c08480 c1da39f786dff0c62fa3843b43ad3d1e 317 Hamap MF_00059 DNA-directed RNA polymerase subunit alpha [rpoA]. 1 317 33.062 T 12-10-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SHELI_v1c08480 c1da39f786dff0c62fa3843b43ad3d1e 317 Gene3D G3DSA:3.30.1360.10 19 223 5.3E-72 T 12-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SHELI_v1c08480 c1da39f786dff0c62fa3843b43ad3d1e 317 TIGRFAM TIGR02027 rpoA: DNA-directed RNA polymerase, alpha subunit 20 316 4.3E-102 T 12-10-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SHELI_v1c08480 c1da39f786dff0c62fa3843b43ad3d1e 317 Gene3D G3DSA:2.170.120.12 50 175 5.3E-72 T 12-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SHELI_v1c08480 c1da39f786dff0c62fa3843b43ad3d1e 317 SMART SM00662 20 232 1.4E-62 T 12-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SHELI_v1c08480 c1da39f786dff0c62fa3843b43ad3d1e 317 SUPERFAMILY SSF55257 10 231 1.43E-24 T 12-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SHELI_v1c08480 c1da39f786dff0c62fa3843b43ad3d1e 317 Pfam PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain 26 226 6.4E-18 T 12-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SHELI_v1c08480 c1da39f786dff0c62fa3843b43ad3d1e 317 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 247 307 2.2E-25 T 12-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SHELI_v1c08480 c1da39f786dff0c62fa3843b43ad3d1e 317 ProDom PD001179 RNA POLYMERASE ALPHA DNA-DIRECTED SUBUNIT CHAIN NUCLEOTIDYLTRANSFERASE TRANSFERASE TRANSCRIPTION TRANSCRIPTASE 257 314 3.0E-13 T 12-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SHELI_v1c08480 c1da39f786dff0c62fa3843b43ad3d1e 317 SUPERFAMILY SSF47789 252 316 2.35E-21 T 12-10-2018 SHELI_v1c10190 d3c8cbbb3a835d71740ad640296d08d5 93 SUPERFAMILY SSF52794 1 90 2.62E-17 T 12-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 SHELI_v1c10190 d3c8cbbb3a835d71740ad640296d08d5 93 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 4 85 6.6E-9 T 12-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 SHELI_v1c10190 d3c8cbbb3a835d71740ad640296d08d5 93 Gene3D G3DSA:3.40.50.2300 1 89 1.9E-18 T 12-10-2018 SHELI_v1c04820 3b1fb710886d72ffde9acd2b415ea92c 227 Gene3D G3DSA:3.40.50.300 1 227 2.8E-41 T 12-10-2018 SHELI_v1c04820 3b1fb710886d72ffde9acd2b415ea92c 227 Pfam PF00005 ABC transporter 18 154 7.2E-21 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SHELI_v1c04820 3b1fb710886d72ffde9acd2b415ea92c 227 SUPERFAMILY SSF52540 2 212 2.89E-40 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHELI_v1c04820 3b1fb710886d72ffde9acd2b415ea92c 227 SMART SM00382 25 191 1.6E-8 T 12-10-2018 IPR003593 AAA+ ATPase domain SHELI_v1c00470 72688a2027ed1992ce25a3748eba690f 166 SUPERFAMILY SSF160369 8 162 4.84E-43 T 12-10-2018 SHELI_v1c00470 72688a2027ed1992ce25a3748eba690f 166 Gene3D G3DSA:3.30.70.1730 7 137 1.9E-33 T 12-10-2018 SHELI_v1c00470 72688a2027ed1992ce25a3748eba690f 166 Hamap MF_00362 50S ribosomal protein L10 [rplJ]. 6 164 23.178 T 12-10-2018 IPR022973 Ribosomal protein L10 SHELI_v1c00470 72688a2027ed1992ce25a3748eba690f 166 Pfam PF00466 Ribosomal protein L10 8 104 5.3E-24 T 12-10-2018 IPR001790 Ribosomal protein L10P GO:0005622|GO:0042254 SHELI_v1c02270 71acd5d8bd4dc1af1f51dce9446a5a41 97 SUPERFAMILY SSF110324 11 93 1.88E-32 T 12-10-2018 SHELI_v1c02270 71acd5d8bd4dc1af1f51dce9446a5a41 97 PRINTS PR00063 Ribosomal protein L27 signature 13 37 1.1E-38 T 12-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHELI_v1c02270 71acd5d8bd4dc1af1f51dce9446a5a41 97 PRINTS PR00063 Ribosomal protein L27 signature 38 62 1.1E-38 T 12-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHELI_v1c02270 71acd5d8bd4dc1af1f51dce9446a5a41 97 PRINTS PR00063 Ribosomal protein L27 signature 63 87 1.1E-38 T 12-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHELI_v1c02270 71acd5d8bd4dc1af1f51dce9446a5a41 97 Pfam PF01016 Ribosomal L27 protein 11 87 3.9E-35 T 12-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHELI_v1c02270 71acd5d8bd4dc1af1f51dce9446a5a41 97 ProDom PD003114 RIBOSOMAL L27 50S RIBONUCLEOPROTEIN CHLOROPLAST MITOCHONDRIAL PEPTIDE 60S TRANSIT PRECURSOR 37 78 4.0E-16 T 12-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHELI_v1c02270 71acd5d8bd4dc1af1f51dce9446a5a41 97 Gene3D G3DSA:2.40.50.1030 15 96 2.9E-26 T 12-10-2018 SHELI_v1c02270 71acd5d8bd4dc1af1f51dce9446a5a41 97 ProSitePatterns PS00831 Ribosomal protein L27 signature. 43 57 - T 12-10-2018 IPR018261 Ribosomal protein L27, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHELI_v1c02270 71acd5d8bd4dc1af1f51dce9446a5a41 97 Hamap MF_00539 50S ribosomal protein L27 [rpmA]. 10 93 27.014 T 12-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHELI_v1c02270 71acd5d8bd4dc1af1f51dce9446a5a41 97 TIGRFAM TIGR00062 L27: ribosomal protein bL27 10 90 1.5E-39 T 12-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHELI_v1c10220 78f9ebb2762f610155d576c3b798c417 257 SUPERFAMILY SSF53697 85 201 2.2E-14 T 12-10-2018 SHELI_v1c10220 78f9ebb2762f610155d576c3b798c417 257 SUPERFAMILY SSF46689 3 73 1.97E-12 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 SHELI_v1c10220 78f9ebb2762f610155d576c3b798c417 257 Pfam PF01418 Helix-turn-helix domain, rpiR family 3 71 1.8E-7 T 12-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 SHELI_v1c10220 78f9ebb2762f610155d576c3b798c417 257 Gene3D G3DSA:1.10.10.10 2 71 5.3E-13 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily SHELI_v1c10220 78f9ebb2762f610155d576c3b798c417 257 Gene3D G3DSA:3.40.50.10490 72 226 3.9E-16 T 12-10-2018 SHELI_v1c04510 dfd097dc9b36386e83b0cec01c538240 121 SUPERFAMILY SSF46955 5 118 6.96E-24 T 12-10-2018 IPR009061 Putative DNA-binding domain superfamily SHELI_v1c04510 dfd097dc9b36386e83b0cec01c538240 121 Pfam PF13411 MerR HTH family regulatory protein 5 72 2.5E-12 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 SHELI_v1c04510 dfd097dc9b36386e83b0cec01c538240 121 Gene3D G3DSA:1.10.1660.10 1 116 6.3E-24 T 12-10-2018 SHELI_v1c04510 dfd097dc9b36386e83b0cec01c538240 121 SMART SM00422 5 74 2.7E-7 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 SHELI_v1c01200 eed728eebf794c4ae1e176834f20d3d9 96 TIGRFAM TIGR00135 gatC: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunit 3 94 5.7E-16 T 12-10-2018 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 SHELI_v1c01200 eed728eebf794c4ae1e176834f20d3d9 96 SUPERFAMILY SSF141000 2 94 7.98E-18 T 12-10-2018 IPR036113 Glu-tRNAGln amidotransferase superfamily, subunit C GO:0006450 SHELI_v1c01200 eed728eebf794c4ae1e176834f20d3d9 96 Pfam PF02686 Glu-tRNAGln amidotransferase C subunit 19 89 3.3E-12 T 12-10-2018 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 SHELI_v1c01200 eed728eebf794c4ae1e176834f20d3d9 96 Gene3D G3DSA:1.10.20.60 1 94 2.1E-12 T 12-10-2018 SHELI_v1c11320 0d43c40c68a31e8d127860e51600aeab 174 Gene3D G3DSA:3.40.50.2020 1 174 1.0E-36 T 12-10-2018 SHELI_v1c11320 0d43c40c68a31e8d127860e51600aeab 174 SUPERFAMILY SSF53271 8 172 1.88E-25 T 12-10-2018 IPR029057 Phosphoribosyltransferase-like SHELI_v1c11320 0d43c40c68a31e8d127860e51600aeab 174 Pfam PF00156 Phosphoribosyl transferase domain 15 154 8.1E-15 T 12-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 SHELI_v1c09290 577fc15e1040196c607cc9adf8cd89c1 246 SUPERFAMILY SSF46785 11 66 5.94E-8 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily SHELI_v1c09290 577fc15e1040196c607cc9adf8cd89c1 246 SMART SM00420 13 68 9.4E-8 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 SHELI_v1c09290 577fc15e1040196c607cc9adf8cd89c1 246 Pfam PF08220 DeoR-like helix-turn-helix domain 13 69 3.4E-11 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 SHELI_v1c09290 577fc15e1040196c607cc9adf8cd89c1 246 SUPERFAMILY SSF100950 89 243 1.26E-10 T 12-10-2018 IPR037171 NagB/RpiA transferase-like SHELI_v1c09290 577fc15e1040196c607cc9adf8cd89c1 246 Pfam PF00455 DeoR C terminal sensor domain 89 242 1.6E-24 T 12-10-2018 IPR014036 DeoR C-terminal sensor domain SHELI_v1c09290 577fc15e1040196c607cc9adf8cd89c1 246 SMART SM01134 85 246 4.8E-12 T 12-10-2018 SHELI_v1c05970 d9b72eab0ef7c92098c1a0b7fd7f138d 185 Gene3D G3DSA:1.10.150.20 68 144 1.4E-7 T 12-10-2018 SHELI_v1c05970 d9b72eab0ef7c92098c1a0b7fd7f138d 185 SUPERFAMILY SSF47781 69 133 4.89E-8 T 12-10-2018 IPR010994 RuvA domain 2-like SHELI_v1c04930 88e65e5145c082ca856183c310a7456d 244 Pfam PF08220 DeoR-like helix-turn-helix domain 6 61 1.5E-9 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 SHELI_v1c04930 88e65e5145c082ca856183c310a7456d 244 SMART SM01134 76 233 2.9E-48 T 12-10-2018 SHELI_v1c04930 88e65e5145c082ca856183c310a7456d 244 Pfam PF00455 DeoR C terminal sensor domain 78 229 9.4E-40 T 12-10-2018 IPR014036 DeoR C-terminal sensor domain SHELI_v1c04930 88e65e5145c082ca856183c310a7456d 244 SMART SM00420 6 58 1.0E-8 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 SHELI_v1c04930 88e65e5145c082ca856183c310a7456d 244 SUPERFAMILY SSF46785 4 59 2.2E-8 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily SHELI_v1c04930 88e65e5145c082ca856183c310a7456d 244 SUPERFAMILY SSF100950 77 217 9.42E-29 T 12-10-2018 IPR037171 NagB/RpiA transferase-like SHELI_v1c06990 a10e11cd5cfb0c4913c3a5698fce1680 106 SUPERFAMILY SSF56214 3 104 4.19E-20 T 12-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 SHELI_v1c06990 a10e11cd5cfb0c4913c3a5698fce1680 106 TIGRFAM TIGR00556 pantethn_trn: phosphopantetheine--protein transferase domain 1 103 1.4E-13 T 12-10-2018 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 SHELI_v1c06990 a10e11cd5cfb0c4913c3a5698fce1680 106 ProDom PD004282 TRANSFERASE SYNTHASE HOLO-ACYL-CARRIER-PROTEIN HOLO-ACP 4'-PHOSPHOPANTETHEINYL FATTY ACID METAL-BINDING MAGNESIUM LIPID 7 65 2.0E-5 T 12-10-2018 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 SHELI_v1c06990 a10e11cd5cfb0c4913c3a5698fce1680 106 Gene3D G3DSA:3.90.470.20 1 106 3.2E-25 T 12-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 SHELI_v1c06990 a10e11cd5cfb0c4913c3a5698fce1680 106 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 4 103 3.0E-15 T 12-10-2018 IPR008278 4'-phosphopantetheinyl transferase domain GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 SHELI_v1c00510 3ec450e907afed264d10c6484bf3246e 342 SUPERFAMILY SSF53067 146 321 5.71E-38 T 12-10-2018 SHELI_v1c00510 3ec450e907afed264d10c6484bf3246e 342 SUPERFAMILY SSF53067 7 142 3.24E-24 T 12-10-2018 SHELI_v1c00510 3ec450e907afed264d10c6484bf3246e 342 Pfam PF06723 MreB/Mbl protein 6 326 3.4E-125 T 12-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 SHELI_v1c00510 3ec450e907afed264d10c6484bf3246e 342 Gene3D G3DSA:3.90.640.10 180 253 1.3E-103 T 12-10-2018 SHELI_v1c00510 3ec450e907afed264d10c6484bf3246e 342 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 63 86 3.5E-28 T 12-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 SHELI_v1c00510 3ec450e907afed264d10c6484bf3246e 342 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 126 145 3.5E-28 T 12-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 SHELI_v1c00510 3ec450e907afed264d10c6484bf3246e 342 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 294 320 3.5E-28 T 12-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 SHELI_v1c00510 3ec450e907afed264d10c6484bf3246e 342 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 181 201 3.5E-28 T 12-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 SHELI_v1c00510 3ec450e907afed264d10c6484bf3246e 342 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 43 61 3.5E-28 T 12-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 SHELI_v1c00510 3ec450e907afed264d10c6484bf3246e 342 Gene3D G3DSA:3.30.420.40 148 311 1.3E-103 T 12-10-2018 SHELI_v1c00510 3ec450e907afed264d10c6484bf3246e 342 Gene3D G3DSA:3.30.420.40 9 318 1.3E-103 T 12-10-2018 SHELI_v1c06600 1fad2a5a5adcee17f4e72fb71dae5001 285 SUPERFAMILY SSF56784 5 282 5.51E-48 T 12-10-2018 IPR036412 HAD-like superfamily SHELI_v1c06600 1fad2a5a5adcee17f4e72fb71dae5001 285 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 8 245 1.1E-20 T 12-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 SHELI_v1c06600 1fad2a5a5adcee17f4e72fb71dae5001 285 Gene3D G3DSA:3.40.50.1000 7 278 2.8E-47 T 12-10-2018 IPR023214 HAD superfamily SHELI_v1c06600 1fad2a5a5adcee17f4e72fb71dae5001 285 Gene3D G3DSA:3.30.1240.10 86 207 2.8E-47 T 12-10-2018 SHELI_v1c06600 1fad2a5a5adcee17f4e72fb71dae5001 285 Pfam PF08282 haloacid dehalogenase-like hydrolase 8 278 2.6E-48 T 12-10-2018 SHELI_v1c00110 8062f8136256360fcd21646940f3d890 242 Gene3D G3DSA:3.40.50.150 5 242 5.7E-58 T 12-10-2018 SHELI_v1c00110 8062f8136256360fcd21646940f3d890 242 SUPERFAMILY SSF53335 10 193 2.09E-32 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHELI_v1c00110 8062f8136256360fcd21646940f3d890 242 Pfam PF13847 Methyltransferase domain 40 192 9.1E-13 T 12-10-2018 IPR025714 Methyltransferase domain SHELI_v1c00110 8062f8136256360fcd21646940f3d890 242 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 115 121 - T 12-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 SHELI_v1c02600 2bf5a0119d201691101e00ac4c4d13aa 91 SUPERFAMILY SSF47729 1 90 9.57E-29 T 12-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 SHELI_v1c02600 2bf5a0119d201691101e00ac4c4d13aa 91 Pfam PF00216 Bacterial DNA-binding protein 1 89 2.3E-28 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 SHELI_v1c02600 2bf5a0119d201691101e00ac4c4d13aa 91 SMART SM00411 1 90 8.6E-34 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 SHELI_v1c02600 2bf5a0119d201691101e00ac4c4d13aa 91 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 1.4E-11 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 SHELI_v1c02600 2bf5a0119d201691101e00ac4c4d13aa 91 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 1.4E-11 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 SHELI_v1c02600 2bf5a0119d201691101e00ac4c4d13aa 91 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 1.4E-11 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 SHELI_v1c02600 2bf5a0119d201691101e00ac4c4d13aa 91 Gene3D G3DSA:4.10.520.10 1 91 1.3E-30 T 12-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 SHELI_v1c02600 2bf5a0119d201691101e00ac4c4d13aa 91 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 12-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 SHELI_v1c08740 d51bdb92d8b451379c873c416f9c78a9 234 Hamap MF_01325_B 50S ribosomal protein L3 [rplC]. 1 203 37.672 T 12-10-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHELI_v1c08740 d51bdb92d8b451379c873c416f9c78a9 234 Gene3D G3DSA:2.40.30.10 141 206 3.4E-16 T 12-10-2018 SHELI_v1c08740 d51bdb92d8b451379c873c416f9c78a9 234 Gene3D G3DSA:2.40.50.620 32 87 3.7E-13 T 12-10-2018 SHELI_v1c08740 d51bdb92d8b451379c873c416f9c78a9 234 SUPERFAMILY SSF50447 1 205 1.68E-72 T 12-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily SHELI_v1c08740 d51bdb92d8b451379c873c416f9c78a9 234 TIGRFAM TIGR03625 L3_bact: 50S ribosomal protein uL3 3 200 1.3E-79 T 12-10-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHELI_v1c08740 d51bdb92d8b451379c873c416f9c78a9 234 ProSitePatterns PS00474 Ribosomal protein L3 signature. 100 123 - T 12-10-2018 IPR019926 Ribosomal protein L3, conserved site SHELI_v1c08740 d51bdb92d8b451379c873c416f9c78a9 234 Pfam PF00297 Ribosomal protein L3 94 178 3.5E-14 T 12-10-2018 IPR000597 Ribosomal protein L3 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHELI_v1c07440 6469722f5c6c71060ded50485a88c080 256 Pfam PF01458 Uncharacterized protein family (UPF0051) 35 231 8.1E-45 T 12-10-2018 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 SHELI_v1c07440 6469722f5c6c71060ded50485a88c080 256 SUPERFAMILY SSF101960 41 252 2.09E-44 T 12-10-2018 IPR037284 SUF system FeS cluster assembly, SufBD superfamily SHELI_v1c09600 c45a361d1f85b8e280b1e5184148e002 131 SUPERFAMILY SSF102546 1 131 2.35E-38 T 12-10-2018 IPR023750 RbsD-like superfamily GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 SHELI_v1c09600 c45a361d1f85b8e280b1e5184148e002 131 Pfam PF05025 RbsD / FucU transport protein family 1 129 8.1E-40 T 12-10-2018 IPR007721 D-ribose pyranase RbsD/L-fucose mutarotase FucU GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 SHELI_v1c09600 c45a361d1f85b8e280b1e5184148e002 131 Gene3D G3DSA:3.40.1650.10 8 128 2.7E-34 T 12-10-2018 IPR023750 RbsD-like superfamily GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 SHELI_v1c07700 a8ffc296291662dab6c310c79cfef2a6 105 Pfam PF03780 Asp23 family, cell envelope-related function 3 99 2.1E-10 T 12-10-2018 IPR005531 Alkaline shock protein Asp23 SHELI_v1c05780 bc0658ab58256409c2fd392b046b4051 93 Gene3D G3DSA:3.60.15.10 2 92 1.4E-15 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like SHELI_v1c05780 bc0658ab58256409c2fd392b046b4051 93 Pfam PF00753 Metallo-beta-lactamase superfamily 12 81 4.7E-9 T 12-10-2018 IPR001279 Metallo-beta-lactamase SHELI_v1c05780 bc0658ab58256409c2fd392b046b4051 93 SUPERFAMILY SSF56281 12 86 2.66E-14 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like SHELI_v1c02630 e293346add2fa72e16a6a0175230fb4e 109 Pfam PF05103 DivIVA protein 7 96 1.6E-7 T 12-10-2018 IPR007793 DivIVA family SHELI_v1c02630 e293346add2fa72e16a6a0175230fb4e 109 TIGRFAM TIGR03544 DivI1A_domain: DivIVA domain 7 40 7.5E-10 T 12-10-2018 IPR019933 DivIVA domain SHELI_v1c02630 e293346add2fa72e16a6a0175230fb4e 109 PIRSF PIRSF029938 1 109 4.8E-21 T 12-10-2018 IPR011229 Cell cycle protein GpsB SHELI_v1c11140 906378e5e51bc1770fc6504bb4ab6871 57 SUPERFAMILY SSF48295 2 54 3.56E-11 T 12-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 SHELI_v1c11140 906378e5e51bc1770fc6504bb4ab6871 57 Pfam PF01527 Transposase 4 51 6.1E-6 T 12-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 SHELI_v1c09240 35e47ec9f5f6a55fcd6ee048642214f9 312 Gene3D G3DSA:2.60.40.1080 146 228 1.4E-7 T 12-10-2018 SHELI_v1c07550 be698f2914e43a14999fa6d98528a0db 105 Hamap MF_00245 UPF0122 protein . 4 101 17.354 T 12-10-2018 IPR007394 Putative helix-turn-helix protein, YlxM/p13-like SHELI_v1c07550 be698f2914e43a14999fa6d98528a0db 105 SUPERFAMILY SSF88659 7 100 2.62E-26 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like SHELI_v1c07550 be698f2914e43a14999fa6d98528a0db 105 Pfam PF04297 Putative helix-turn-helix protein, YlxM / p13 like 6 96 1.0E-25 T 12-10-2018 IPR007394 Putative helix-turn-helix protein, YlxM/p13-like SHELI_v1c07550 be698f2914e43a14999fa6d98528a0db 105 Gene3D G3DSA:1.10.10.10 1 104 1.4E-29 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily SHELI_v1c08260 fa4dc6573b61519fa7ca190247476d0b 141 Pfam PF01467 Cytidylyltransferase-like 4 133 1.7E-15 T 12-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 SHELI_v1c08260 fa4dc6573b61519fa7ca190247476d0b 141 TIGRFAM TIGR01510 coaD_prev_kdtB: pantetheine-phosphate adenylyltransferase 2 138 3.0E-44 T 12-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 SHELI_v1c08260 fa4dc6573b61519fa7ca190247476d0b 141 Gene3D G3DSA:3.40.50.620 1 140 1.2E-38 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SHELI_v1c08260 fa4dc6573b61519fa7ca190247476d0b 141 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 2 59 8.1E-14 T 12-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 SHELI_v1c08260 fa4dc6573b61519fa7ca190247476d0b 141 Hamap MF_00151 Phosphopantetheine adenylyltransferase [coaD]. 1 140 21.863 T 12-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 SHELI_v1c08260 fa4dc6573b61519fa7ca190247476d0b 141 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 85 101 1.0E-30 T 12-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 SHELI_v1c08260 fa4dc6573b61519fa7ca190247476d0b 141 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 48 72 1.0E-30 T 12-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 SHELI_v1c08260 fa4dc6573b61519fa7ca190247476d0b 141 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 1 19 1.0E-30 T 12-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 SHELI_v1c08260 fa4dc6573b61519fa7ca190247476d0b 141 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 19 40 1.0E-30 T 12-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 SHELI_v1c08260 fa4dc6573b61519fa7ca190247476d0b 141 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 112 134 1.0E-30 T 12-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 SHELI_v1c08260 fa4dc6573b61519fa7ca190247476d0b 141 SUPERFAMILY SSF52374 1 135 3.22E-30 T 12-10-2018 SHELI_v1c01230 d17bae0c5e116e46a1063410fc3360d0 230 Gene3D G3DSA:3.30.70.1450 155 222 8.8E-13 T 12-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 SHELI_v1c01230 d17bae0c5e116e46a1063410fc3360d0 230 SUPERFAMILY SSF116726 146 219 9.42E-14 T 12-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 SHELI_v1c01230 d17bae0c5e116e46a1063410fc3360d0 230 Pfam PF02080 TrkA-C domain 159 220 5.2E-13 T 12-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 SHELI_v1c01230 d17bae0c5e116e46a1063410fc3360d0 230 Gene3D G3DSA:3.40.50.720 1 141 2.7E-26 T 12-10-2018 SHELI_v1c01230 d17bae0c5e116e46a1063410fc3360d0 230 Pfam PF02254 TrkA-N domain 7 126 3.6E-19 T 12-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 SHELI_v1c01230 d17bae0c5e116e46a1063410fc3360d0 230 SUPERFAMILY SSF51735 6 138 3.18E-22 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily SHELI_v1c07200 4e4cd5f999697a1ee92b0a75944607aa 143 Hamap MF_01008 Transcriptional regulator MraZ [mraZ]. 1 143 32.415 T 12-10-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 SHELI_v1c07200 4e4cd5f999697a1ee92b0a75944607aa 143 ProDom PD006745 MRAZ YABB DIVISION CELL 3D-STRUCTURE UNCHARACTERIZED BCR SIMILAR PROTEIN 1 124 3.0E-31 T 12-10-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 SHELI_v1c07200 4e4cd5f999697a1ee92b0a75944607aa 143 SUPERFAMILY SSF89447 1 125 7.03E-36 T 12-10-2018 IPR037914 SpoVT-AbrB domain superfamily SHELI_v1c07200 4e4cd5f999697a1ee92b0a75944607aa 143 TIGRFAM TIGR00242 TIGR00242: division/cell wall cluster transcriptional repressor MraZ 1 139 6.8E-31 T 12-10-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 SHELI_v1c07200 4e4cd5f999697a1ee92b0a75944607aa 143 Pfam PF02381 MraZ protein, putative antitoxin-like 1 70 8.8E-15 T 12-10-2018 IPR020603 MraZ domain SHELI_v1c07200 4e4cd5f999697a1ee92b0a75944607aa 143 Pfam PF02381 MraZ protein, putative antitoxin-like 73 137 1.8E-10 T 12-10-2018 IPR020603 MraZ domain SHELI_v1c07200 4e4cd5f999697a1ee92b0a75944607aa 143 Gene3D G3DSA:2.40.330.20 1 141 1.0E-37 T 12-10-2018 IPR038619 MraZ superfamily SHELI_v1c06140 be6071c466176aab356f5dca58af16e2 208 SMART SM00382 3 153 0.0068 T 12-10-2018 IPR003593 AAA+ ATPase domain SHELI_v1c06140 be6071c466176aab356f5dca58af16e2 208 PRINTS PR00988 Uridine kinase signature 80 95 2.8E-31 T 12-10-2018 SHELI_v1c06140 be6071c466176aab356f5dca58af16e2 208 PRINTS PR00988 Uridine kinase signature 136 146 2.8E-31 T 12-10-2018 SHELI_v1c06140 be6071c466176aab356f5dca58af16e2 208 PRINTS PR00988 Uridine kinase signature 150 161 2.8E-31 T 12-10-2018 SHELI_v1c06140 be6071c466176aab356f5dca58af16e2 208 PRINTS PR00988 Uridine kinase signature 172 185 2.8E-31 T 12-10-2018 SHELI_v1c06140 be6071c466176aab356f5dca58af16e2 208 PRINTS PR00988 Uridine kinase signature 4 21 2.8E-31 T 12-10-2018 SHELI_v1c06140 be6071c466176aab356f5dca58af16e2 208 PRINTS PR00988 Uridine kinase signature 35 46 2.8E-31 T 12-10-2018 SHELI_v1c06140 be6071c466176aab356f5dca58af16e2 208 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 6 191 4.6E-39 T 12-10-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0016301 Reactome: R-HSA-73614 SHELI_v1c06140 be6071c466176aab356f5dca58af16e2 208 Gene3D G3DSA:3.40.50.300 1 208 1.9E-58 T 12-10-2018 SHELI_v1c06140 be6071c466176aab356f5dca58af16e2 208 SUPERFAMILY SSF52540 3 197 3.39E-41 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHELI_v1c06140 be6071c466176aab356f5dca58af16e2 208 TIGRFAM TIGR00235 udk: uridine kinase 3 205 8.1E-71 T 12-10-2018 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|Reactome: R-HSA-73614 SHELI_v1c06370 8d656dd4d2419c8a818342f51d5bccae 409 Gene3D G3DSA:3.40.640.10 29 279 1.1E-171 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 SHELI_v1c06370 8d656dd4d2419c8a818342f51d5bccae 409 SUPERFAMILY SSF53383 5 405 5.98E-165 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase SHELI_v1c06370 8d656dd4d2419c8a818342f51d5bccae 409 PIRSF PIRSF000412 1 406 2.7E-159 T 12-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 SHELI_v1c06370 8d656dd4d2419c8a818342f51d5bccae 409 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 1 405 49.492 T 12-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 SHELI_v1c06370 8d656dd4d2419c8a818342f51d5bccae 409 Gene3D G3DSA:3.90.1150.10 4 385 1.1E-171 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 SHELI_v1c06370 8d656dd4d2419c8a818342f51d5bccae 409 Pfam PF00464 Serine hydroxymethyltransferase 4 377 8.7E-158 T 12-10-2018 IPR039429 Serine hydroxymethyltransferase-like domain KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 SHELI_v1c00690 d2301e7db866bd803057f0404b367b21 97 Gene3D G3DSA:2.60.15.10 1 92 2.5E-20 T 12-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 SHELI_v1c00690 d2301e7db866bd803057f0404b367b21 97 ProDom PD000944 ATP SYNTHASE ION EPSILON SUBUNIT HYDROLASE CF1 SYNTHESIS CHAIN HYDROGEN 9 79 1.0E-6 T 12-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 SHELI_v1c00690 d2301e7db866bd803057f0404b367b21 97 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 4 80 1.3E-17 T 12-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 SHELI_v1c00690 d2301e7db866bd803057f0404b367b21 97 SUPERFAMILY SSF51344 3 81 4.32E-17 T 12-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 SHELI_v1c08880 069ddbb38741a21744c8dd46bf71ebfa 268 SUPERFAMILY SSF53167 2 268 6.28E-85 T 12-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 SHELI_v1c08880 069ddbb38741a21744c8dd46bf71ebfa 268 Pfam PF01048 Phosphorylase superfamily 20 265 2.7E-49 T 12-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 SHELI_v1c08880 069ddbb38741a21744c8dd46bf71ebfa 268 TIGRFAM TIGR01700 PNPH: purine nucleoside phosphorylase I, inosine and guanosine-specific 20 265 3.0E-88 T 12-10-2018 IPR011270 Purine nucleoside phosphorylase I, inosine/guanosine-specific GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-6798695|Reactome: R-HSA-74217|Reactome: R-HSA-74259 SHELI_v1c08880 069ddbb38741a21744c8dd46bf71ebfa 268 PIRSF PIRSF000477 1 268 3.3E-96 T 12-10-2018 IPR011268 Purine nucleoside phosphorylase GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-6798695|Reactome: R-HSA-74217|Reactome: R-HSA-74259 SHELI_v1c08880 069ddbb38741a21744c8dd46bf71ebfa 268 TIGRFAM TIGR01697 PNPH-PUNA-XAPA: inosine/guanosine/xanthosine phosphorylase family 20 265 1.6E-93 T 12-10-2018 IPR011268 Purine nucleoside phosphorylase GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-6798695|Reactome: R-HSA-74217|Reactome: R-HSA-74259 SHELI_v1c08880 069ddbb38741a21744c8dd46bf71ebfa 268 Gene3D G3DSA:3.40.50.1580 1 268 5.2E-99 T 12-10-2018 SHELI_v1c07990 db448003fb180336a7d3896939d1af3a 401 Hamap MF_00021 tRNA sulfurtransferase [thiI]. 1 401 124.699 T 12-10-2018 IPR003720 tRNA sulfurtransferase ThiI GO:0005737|GO:0016783|GO:0034227 KEGG: 00730+2.8.1.4 SHELI_v1c07990 db448003fb180336a7d3896939d1af3a 401 SMART SM00981 73 162 1.3E-13 T 12-10-2018 IPR004114 THUMP domain GO:0003723 SHELI_v1c07990 db448003fb180336a7d3896939d1af3a 401 TIGRFAM TIGR00342 TIGR00342: tRNA sulfurtransferase ThiI 4 374 3.6E-112 T 12-10-2018 IPR003720 tRNA sulfurtransferase ThiI GO:0005737|GO:0016783|GO:0034227 KEGG: 00730+2.8.1.4 SHELI_v1c07990 db448003fb180336a7d3896939d1af3a 401 Gene3D G3DSA:3.40.50.620 172 399 4.1E-67 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SHELI_v1c07990 db448003fb180336a7d3896939d1af3a 401 Pfam PF02926 THUMP domain 51 160 1.1E-11 T 12-10-2018 IPR004114 THUMP domain GO:0003723 SHELI_v1c07990 db448003fb180336a7d3896939d1af3a 401 SUPERFAMILY SSF52402 172 370 2.43E-46 T 12-10-2018 SHELI_v1c07990 db448003fb180336a7d3896939d1af3a 401 Gene3D G3DSA:3.30.2130.30 1 171 7.3E-45 T 12-10-2018 SHELI_v1c07990 db448003fb180336a7d3896939d1af3a 401 Pfam PF02568 Thiamine biosynthesis protein (ThiI) 172 367 7.8E-68 T 12-10-2018 IPR020536 Thil, AANH domain GO:0004810 KEGG: 00730+2.8.1.4 SHELI_v1c07990 db448003fb180336a7d3896939d1af3a 401 SUPERFAMILY SSF143437 1 170 3.49E-41 T 12-10-2018 SHELI_v1c06350 a1e3b42beb9969e4a28d101ef5780686 166 TIGRFAM TIGR04522 EcfS_MSC_0063: putative energy coupling factor transporter S component 6 154 6.6E-40 T 12-10-2018 IPR030945 Putative energy coupling factor transporter S component SHELI_v1c06350 a1e3b42beb9969e4a28d101ef5780686 166 Gene3D G3DSA:1.10.1760.20 4 161 3.8E-14 T 12-10-2018 SHELI_v1c00800 c7755fbeb9610d75aaf85313b6d6aa73 310 SUPERFAMILY SSF75138 1 118 1.12E-24 T 12-10-2018 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily SHELI_v1c00800 c7755fbeb9610d75aaf85313b6d6aa73 310 Pfam PF02603 HPr Serine kinase N terminus 5 126 3.9E-29 T 12-10-2018 IPR011126 HPr(Ser) kinase/phosphorylase, N-terminal GO:0000155|GO:0000160|GO:0004672|GO:0005524|GO:0006109 SHELI_v1c00800 c7755fbeb9610d75aaf85313b6d6aa73 310 Gene3D G3DSA:3.40.1390.20 3 130 2.0E-31 T 12-10-2018 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily SHELI_v1c00800 c7755fbeb9610d75aaf85313b6d6aa73 310 Gene3D G3DSA:3.40.50.300 135 307 1.0E-49 T 12-10-2018 SHELI_v1c00800 c7755fbeb9610d75aaf85313b6d6aa73 310 TIGRFAM TIGR00679 hpr-ser: HPr(Ser) kinase/phosphatase 5 303 2.3E-84 T 12-10-2018 IPR003755 HPr(Ser) kinase/phosphorylase GO:0000155|GO:0000160|GO:0005524|GO:0006109 SHELI_v1c00800 c7755fbeb9610d75aaf85313b6d6aa73 310 SUPERFAMILY SSF53795 137 289 3.36E-23 T 12-10-2018 SHELI_v1c00800 c7755fbeb9610d75aaf85313b6d6aa73 310 Pfam PF07475 HPr Serine kinase C-terminal domain 132 292 5.8E-49 T 12-10-2018 IPR011104 HPr kinase/phosphorylase, C-terminal GO:0000155|GO:0000160|GO:0004672|GO:0005524|GO:0006109 SHELI_v1c00740 caf764d2f656f0e12b4bff44a123e420 198 Pfam PF01205 Uncharacterized protein family UPF0029 17 118 1.2E-27 T 12-10-2018 IPR001498 Impact, N-terminal SHELI_v1c00740 caf764d2f656f0e12b4bff44a123e420 198 SUPERFAMILY SSF54211 8 127 4.93E-37 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold SHELI_v1c00740 caf764d2f656f0e12b4bff44a123e420 198 Gene3D G3DSA:3.30.230.30 2 130 3.5E-41 T 12-10-2018 IPR036956 Impact, N-terminal domain superfamily SHELI_v1c01650 de92bb659a463d0175d51a9e24e1c087 188 SUPERFAMILY SSF53067 2 83 2.4E-14 T 12-10-2018 SHELI_v1c01650 de92bb659a463d0175d51a9e24e1c087 188 Gene3D G3DSA:3.30.420.40 5 184 2.4E-27 T 12-10-2018 SHELI_v1c01650 de92bb659a463d0175d51a9e24e1c087 188 Pfam PF00814 Glycoprotease family 38 82 1.2E-10 T 12-10-2018 IPR000905 Gcp-like domain SHELI_v1c01650 de92bb659a463d0175d51a9e24e1c087 188 TIGRFAM TIGR03725 T6A_YeaZ: tRNA threonylcarbamoyl adenosine modification protein YeaZ 3 143 1.9E-24 T 12-10-2018 IPR022496 tRNA threonylcarbamoyl adenosine modification protein TsaB GO:0002949 SHELI_v1c01650 de92bb659a463d0175d51a9e24e1c087 188 Gene3D G3DSA:3.30.420.200 95 154 2.4E-27 T 12-10-2018 SHELI_v1c03880 093d87a74dcb06fc5a84a9a19ce00cb0 120 SUPERFAMILY SSF117856 3 117 2.33E-9 T 12-10-2018 SHELI_v1c03880 093d87a74dcb06fc5a84a9a19ce00cb0 120 Gene3D G3DSA:3.30.1330.80 1 120 2.5E-7 T 12-10-2018 SHELI_v1c04890 952c5323a9f90528295af27637b4018a 144 Gene3D G3DSA:3.40.50.300 1 137 6.6E-22 T 12-10-2018 SHELI_v1c04890 952c5323a9f90528295af27637b4018a 144 SUPERFAMILY SSF52540 2 132 5.91E-20 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHELI_v1c04890 952c5323a9f90528295af27637b4018a 144 Pfam PF00005 ABC transporter 22 134 4.2E-14 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SHELI_v1c09390 c50bf3bc37dc0125bb8a2ffd4f487617 156 ProDom PD007643 SPIRALIN PRECURSOR SIGNAL MEMBRANE PALMITATE LIPOPROTEIN 1 54 0.008 T 12-10-2018 IPR007880 Spiralin GO:0016020 SHELI_v1c09410 268bc84b3d2f6270d5a8e81a9e410223 95 Gene3D G3DSA:1.10.10.1880 25 93 3.1E-5 T 12-10-2018 SHELI_v1c06190 9cf564df97611b2688ccc276a9560a99 437 Pfam PF02810 SEC-C motif 67 82 2.5E-4 T 12-10-2018 IPR004027 SEC-C motif