CGP94_00001 SM00382 ATPases associated with a variety of cellular activities CGP94_00001 SM00760 Bacterial dnaA protein helix-turn-helix domain CGP94_00002 SM00480 DNA polymerase III beta subunit CGP94_00005 SM00387 Histidine kinase-like ATPases CGP94_00005 SM00433 TopoisomeraseII CGP94_00006 SM00434 DNA Topoisomerase IV CGP94_00014 SM00267 diguanylate cyclase CGP94_00017 SM00788 Adenylosuccinate synthetase CGP94_00020 SM00448 cheY-homologous receiver domain CGP94_00020 SM00862 Transcriptional regulatory protein, C terminal CGP94_00021 SM00091 PAS domain CGP94_00021 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CGP94_00021 SM00387 Histidine kinase-like ATPases CGP94_00021 SM00388 His Kinase A (phosphoacceptor) domain CGP94_00024 SM00849 Metallo-beta-lactamase superfamily CGP94_00036 SM00450 Rhodanese Homology Domain CGP94_00037 SM00450 Rhodanese Homology Domain CGP94_00037 SM00849 Metallo-beta-lactamase superfamily CGP94_00046 SM00148 Phospholipase C, catalytic domain (part); domain X CGP94_00048 SM00342 helix_turn_helix, arabinose operon control protein CGP94_00054 SM00345 helix_turn_helix gluconate operon transcriptional repressor CGP94_00057 SM00257 Lysin motif CGP94_00058 SM00347 helix_turn_helix multiple antibiotic resistance protein CGP94_00070 SM00470 ParB-like nuclease domain CGP94_00073 SM00822 CGP94_00073 CGP94_00081 SM00345 helix_turn_helix gluconate operon transcriptional repressor CGP94_00084 SM01133 CGP94_00084 CGP94_00090 SM00382 ATPases associated with a variety of cellular activities CGP94_00091 SM00062 Bacterial periplasmic substrate-binding proteins CGP94_00096 SM00530 Helix-turn-helix XRE-family like proteins CGP94_00112 SM00984 UDP binding domain CGP94_00121 SM00382 ATPases associated with a variety of cellular activities CGP94_00131 SM00859 Semialdehyde dehydrogenase, NAD binding domain CGP94_00143 SM00487 DEAD-like helicases superfamily CGP94_00147 SM00382 ATPases associated with a variety of cellular activities CGP94_00154 SM00382 ATPases associated with a variety of cellular activities CGP94_00163 SM00342 helix_turn_helix, arabinose operon control protein CGP94_00163 SM00448 cheY-homologous receiver domain CGP94_00175 SM00882 Coenzyme A transferase CGP94_00188 SM00829 Enoylreductase CGP94_00190 SM00829 Enoylreductase CGP94_00200 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CGP94_00200 SM00387 Histidine kinase-like ATPases CGP94_00201 SM00448 cheY-homologous receiver domain CGP94_00201 SM00850 LytTr DNA-binding domain CGP94_00205 SM00345 helix_turn_helix gluconate operon transcriptional repressor CGP94_00205 SM00866 CGP94_00205 CGP94_00213 SM00354 helix_turn _helix lactose operon repressor CGP94_00218 SM00382 ATPases associated with a variety of cellular activities CGP94_00247 SM00382 ATPases associated with a variety of cellular activities CGP94_00253 SM01130 CGP94_00253 CGP94_00263 SM00506 Appr-1"-p processing enzyme CGP94_00270 SM00347 helix_turn_helix multiple antibiotic resistance protein CGP94_00285 SM00530 Helix-turn-helix XRE-family like proteins CGP94_00287 SM00382 ATPases associated with a variety of cellular activities CGP94_00296 SM00470 ParB-like nuclease domain CGP94_00310 SM00855 Phosphoglycerate mutase family CGP94_00324 SM00116 Domain in cystathionine beta-synthase and other proteins. CGP94_00324 SM01240 CGP94_00324 CGP94_00358 SM00833 Cobalamin synthesis protein cobW C-terminal domain CGP94_00362 SM00014 Acid phosphatase homologues CGP94_00367 SM00382 ATPases associated with a variety of cellular activities CGP94_00367 SM00930 CGP94_00367 CGP94_00370 SM00257 Lysin motif CGP94_00381 SM00642 Alpha-amylase domain CGP94_00382 SM00345 helix_turn_helix gluconate operon transcriptional repressor CGP94_00382 SM00866 CGP94_00382 CGP94_00384 SM00382 ATPases associated with a variety of cellular activities CGP94_00386 SM00278 Helix-hairpin-helix DNA-binding motif class 1 CGP94_00386 SM00493 CGP94_00386 CGP94_00394 SM00465 GIY-YIG type nucleases (URI domain) CGP94_00398 SM00493 CGP94_00398 CGP94_00399 SM00650 Ribosomal RNA adenine dimethylases CGP94_00406 SM01400 CGP94_00406 CGP94_00409 SM00487 DEAD-like helicases superfamily CGP94_00409 SM00490 helicase superfamily c-terminal domain CGP94_00409 SM00982 CGP94_00409 CGP94_00409 SM01058 CarD-like/TRCF domain CGP94_00412 SM00363 S4 RNA-binding domain CGP94_00414 SM00316 Ribosomal protein S1-like RNA-binding domain CGP94_00415 SM00977 TilS substrate C-terminal domain CGP94_00417 SM00382 ATPases associated with a variety of cellular activities CGP94_00421 SM00905 Dihydroneopterin aldolase CGP94_00433 SM00345 helix_turn_helix gluconate operon transcriptional repressor CGP94_00440 SM00382 ATPases associated with a variety of cellular activities CGP94_00440 SM01086 C-terminal, D2-small domain, of ClpB protein CGP94_00441 SM00382 ATPases associated with a variety of cellular activities CGP94_00442 SM00670 Large family of predicted nucleotide-binding domains CGP94_00445 SM00840 CGP94_00445 CGP94_00446 SM00535 Ribonuclease III family CGP94_00447 SM00967 RNA 2'-O ribose methyltransferase substrate binding CGP94_00451 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. CGP94_00451 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. CGP94_00452 SM00649 Ribosomal protein L11/L12 CGP94_00458 SM00663 RNA polymerase I subunit A N-terminus CGP94_00462 SM00838 Elongation factor G C-terminus CGP94_00462 SM00889 Elongation factor G, domain IV CGP94_00485 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family CGP94_00495 SM00986 Uracil DNA glycosylase superfamily CGP94_00495 SM00987 UreE urease accessory protein, C-terminal domain CGP94_00519 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CGP94_00521 SM00829 Enoylreductase CGP94_00523 SM00836 DALR anticodon binding domain CGP94_00523 SM01016 Arginyl tRNA synthetase N terminal dom CGP94_00524 SM00478 endonuclease III CGP94_00547 SM00382 ATPases associated with a variety of cellular activities CGP94_00548 SM00529 Helix-turn-helix diphteria tox regulatory element CGP94_00548 SM00899 CGP94_00548 CGP94_00551 SM00382 ATPases associated with a variety of cellular activities CGP94_00557 SM00382 ATPases associated with a variety of cellular activities CGP94_00560 SM00382 ATPases associated with a variety of cellular activities CGP94_00564 SM01120 CGP94_00564 CGP94_00573 SM00448 cheY-homologous receiver domain CGP94_00573 SM00862 Transcriptional regulatory protein, C terminal CGP94_00574 SM00387 Histidine kinase-like ATPases CGP94_00575 SM00382 ATPases associated with a variety of cellular activities CGP94_00579 SM00257 Lysin motif CGP94_00581 SM00342 helix_turn_helix, arabinose operon control protein CGP94_00598 SM00382 ATPases associated with a variety of cellular activities CGP94_00599 SM00382 ATPases associated with a variety of cellular activities CGP94_00600 SM00347 helix_turn_helix multiple antibiotic resistance protein CGP94_00601 SM00833 Cobalamin synthesis protein cobW C-terminal domain CGP94_00612 SM00420 helix_turn_helix, Deoxyribose operon repressor CGP94_00612 SM01134 CGP94_00612 CGP94_00616 SM01091 Transporter associated domain CGP94_00619 SM00387 Histidine kinase-like ATPases CGP94_00619 SM00388 His Kinase A (phosphoacceptor) domain CGP94_00620 SM00448 cheY-homologous receiver domain CGP94_00620 SM00862 Transcriptional regulatory protein, C terminal CGP94_00630 SM00796 Allophanate hydrolase subunit 1 CGP94_00631 SM00797 Allophanate hydrolase subunit 2 CGP94_00633 SM00382 ATPases associated with a variety of cellular activities CGP94_00634 SM00341 Helicase and RNase D C-terminal CGP94_00634 SM00487 DEAD-like helicases superfamily CGP94_00634 SM00490 helicase superfamily c-terminal domain CGP94_00634 SM00956 CGP94_00634 CGP94_00635 SM00382 ATPases associated with a variety of cellular activities CGP94_00639 SM00046 Diacylglycerol kinase catalytic domain (presumed) CGP94_00648 SM00382 ATPases associated with a variety of cellular activities CGP94_00659 SM00267 diguanylate cyclase CGP94_00663 SM00487 DEAD-like helicases superfamily CGP94_00663 SM00490 helicase superfamily c-terminal domain CGP94_00666 SM00957 SecA DEAD-like domain CGP94_00666 SM00958 SecA preprotein cross-linking domain CGP94_00667 SM00937 CGP94_00667 CGP94_00668 SM00257 Lysin motif CGP94_00671 SM00487 DEAD-like helicases superfamily CGP94_00671 SM00490 helicase superfamily c-terminal domain CGP94_00676 SM00028 Tetratricopeptide repeats CGP94_00683 SM00919 Malic enzyme, NAD binding domain CGP94_00683 SM01274 CGP94_00683 CGP94_00687 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CGP94_00691 SM01192 CGP94_00691 CGP94_00691 SM01193 CGP94_00691 CGP94_00695 SM00316 Ribosomal protein S1-like RNA-binding domain CGP94_00695 SM00357 Cold shock protein domain CGP94_00695 SM00955 CGP94_00695 CGP94_00705 SM00318 Staphylococcal nuclease homologues CGP94_00706 SM00357 Cold shock protein domain CGP94_00714 SM00855 Phosphoglycerate mutase family CGP94_00725 SM00493 CGP94_00725 CGP94_00727 SM00382 ATPases associated with a variety of cellular activities CGP94_00727 SM00930 CGP94_00727 CGP94_00732 SM00382 ATPases associated with a variety of cellular activities CGP94_00742 SM00530 Helix-turn-helix XRE-family like proteins CGP94_00746 SM00530 Helix-turn-helix XRE-family like proteins CGP94_00782 SM00959 Rho termination factor, N-terminal domain CGP94_00798 SM00047 Lysozyme subfamily 2 CGP94_00802 SM00646 CGP94_00802 CGP94_00812 SM00729 Elongator protein 3, MiaB family, Radical SAM CGP94_00840 SM01298 CGP94_00840 CGP94_00842 SM00316 Ribosomal protein S1-like RNA-binding domain CGP94_00845 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CGP94_00861 SM00382 ATPases associated with a variety of cellular activities CGP94_00861 SM01086 C-terminal, D2-small domain, of ClpB protein CGP94_00871 SM00825 Beta-ketoacyl synthase CGP94_00875 SM00382 ATPases associated with a variety of cellular activities CGP94_00876 SM00382 ATPases associated with a variety of cellular activities CGP94_00879 SM00382 ATPases associated with a variety of cellular activities CGP94_00880 SM00382 ATPases associated with a variety of cellular activities CGP94_00890 SM01118 CGP94_00890 CGP94_00892 SM00954 Region found in RelA / SpoT proteins CGP94_00895 SM00116 Domain in cystathionine beta-synthase and other proteins. CGP94_00895 SM00924 MgtE intracellular N domain CGP94_00908 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CGP94_00914 SM00914 CGP94_00914 CGP94_00921 SM00382 ATPases associated with a variety of cellular activities CGP94_00940 SM00347 helix_turn_helix multiple antibiotic resistance protein CGP94_00941 SM00047 Lysozyme subfamily 2 CGP94_00941 SM00644 CGP94_00941 CGP94_00954 SM01001 AIR carboxylase CGP94_00958 SM01211 CGP94_00958 CGP94_00963 SM00798 AICARFT/IMPCHase bienzyme CGP94_00963 SM00851 MGS-like domain CGP94_00964 SM01209 CGP94_00964 CGP94_00964 SM01210 CGP94_00964 CGP94_00966 SM00382 ATPases associated with a variety of cellular activities CGP94_00980 SM00849 Metallo-beta-lactamase superfamily CGP94_00985 SM00861 Transketolase, pyrimidine binding domain CGP94_00989 SM00530 Helix-turn-helix XRE-family like proteins CGP94_00990 SM00382 ATPases associated with a variety of cellular activities CGP94_01000 SM00838 Elongation factor G C-terminus CGP94_01004 SM00878 Biotin carboxylase C-terminal domain CGP94_01019 SM00725 NEAr Transporter domain CGP94_01020 SM00725 NEAr Transporter domain CGP94_01021 SM00725 NEAr Transporter domain CGP94_01027 SM00967 RNA 2'-O ribose methyltransferase substrate binding CGP94_01029 SM00873 B3/4 domain CGP94_01029 SM00874 tRNA synthetase B5 domain CGP94_01029 SM00896 Ferredoxin-fold anticodon binding domain CGP94_01033 SM00278 Helix-hairpin-helix DNA-binding motif class 1 CGP94_01033 SM00481 DNA polymerase alpha chain like domain CGP94_01033 SM00483 DNA polymerase X family CGP94_01034 SM00463 Small MutS-related domain CGP94_01034 SM00533 DNA-binding domain of DNA mismatch repair MUTS family CGP94_01034 SM00534 ATPase domain of DNA mismatch repair MUTS family CGP94_01036 SM00465 GIY-YIG type nucleases (URI domain) CGP94_01070 SM00740 CGP94_01070 CGP94_01074 SM00842 Cell division protein FtsA CGP94_01075 SM00864 Tubulin/FtsZ family, GTPase domain CGP94_01075 SM00865 Tubulin/FtsZ family, C-terminal domain CGP94_01080 SM00363 S4 RNA-binding domain CGP94_01088 SM00363 S4 RNA-binding domain CGP94_01093 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain CGP94_01094 SM00851 MGS-like domain CGP94_01094 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CGP94_01094 SM01209 CGP94_01094 CGP94_01095 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family CGP94_01101 SM00072 Guanylate kinase homologues. CGP94_01102 SM01409 CGP94_01102 CGP94_01104 SM00487 DEAD-like helicases superfamily CGP94_01104 SM00490 helicase superfamily c-terminal domain CGP94_01111 SM00331 Sigma factor PP2C-like phosphatases CGP94_01111 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain CGP94_01112 SM00220 Serine/Threonine protein kinases, catalytic domain CGP94_01112 SM00740 CGP94_01112 CGP94_01115 SM00983 Thiamin pyrophosphokinase, vitamin B1 binding domain CGP94_01118 SM01120 CGP94_01118 CGP94_01118 SM01121 CGP94_01118 CGP94_01119 SM00487 DEAD-like helicases superfamily CGP94_01119 SM00490 helicase superfamily c-terminal domain CGP94_01122 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. CGP94_01123 SM00822 CGP94_01123 CGP94_01125 SM00358 Double-stranded RNA binding motif CGP94_01125 SM00535 Ribonuclease III family CGP94_01126 SM00968 SMC proteins Flexible Hinge Domain CGP94_01127 SM00382 ATPases associated with a variety of cellular activities CGP94_01127 SM00962 SRP54-type protein, GTPase domain CGP94_01127 SM00963 SRP54-type protein, helical bundle domain CGP94_01129 SM00382 ATPases associated with a variety of cellular activities CGP94_01129 SM00962 SRP54-type protein, GTPase domain CGP94_01129 SM00963 SRP54-type protein, helical bundle domain CGP94_01139 SM00881 CoA binding domain CGP94_01143 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain CGP94_01143 SM00437 Bacterial DNA topoisomerase I DNA-binding domain CGP94_01143 SM00493 CGP94_01143 CGP94_01147 SM00382 ATPases associated with a variety of cellular activities CGP94_01147 SM01086 C-terminal, D2-small domain, of ClpB protein CGP94_01157 SM00479 CGP94_01157 CGP94_01157 SM00481 DNA polymerase alpha chain like domain CGP94_01159 SM00316 Ribosomal protein S1-like RNA-binding domain CGP94_01159 SM00322 K homology RNA-binding domain CGP94_01165 SM00904 Riboflavin kinase CGP94_01166 SM01387 CGP94_01166 CGP94_01167 SM00316 Ribosomal protein S1-like RNA-binding domain CGP94_01167 SM00322 K homology RNA-binding domain CGP94_01168 SM00849 Metallo-beta-lactamase superfamily CGP94_01169 SM00382 ATPases associated with a variety of cellular activities CGP94_01169 SM00843 CGP94_01169 CGP94_01170 SM00345 helix_turn_helix gluconate operon transcriptional repressor CGP94_01170 SM00866 CGP94_01170 CGP94_01175 SM00530 Helix-turn-helix XRE-family like proteins CGP94_01177 SM00852 Probable molybdopterin binding domain CGP94_01178 SM00382 ATPases associated with a variety of cellular activities CGP94_01179 SM00322 K homology RNA-binding domain CGP94_01179 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CGP94_01185 SM00729 Elongator protein 3, MiaB family, Radical SAM CGP94_01188 SM00533 DNA-binding domain of DNA mismatch repair MUTS family CGP94_01188 SM00534 ATPase domain of DNA mismatch repair MUTS family CGP94_01189 SM00853 MutL C terminal dimerisation domain CGP94_01189 SM01340 CGP94_01189 CGP94_01201 SM00422 helix_turn_helix, mercury resistance CGP94_01202 SM01230 CGP94_01202 CGP94_01215 SM01040 BRO family, N-terminal domain CGP94_01219 SM00487 DEAD-like helicases superfamily CGP94_01232 SM00507 HNH nucleases CGP94_01252 SM00644 CGP94_01252 CGP94_01261 SM00155 Phospholipase D. Active site motifs. CGP94_01263 SM00382 ATPases associated with a variety of cellular activities CGP94_01267 SM00421 helix_turn_helix, Lux Regulon CGP94_01267 SM00448 cheY-homologous receiver domain CGP94_01269 SM00318 Staphylococcal nuclease homologues CGP94_01279 SM01060 CGP94_01279 CGP94_01282 SM01240 CGP94_01282 CGP94_01287 SM00861 Transketolase, pyrimidine binding domain CGP94_01297 SM01207 CGP94_01297 CGP94_01298 SM00387 Histidine kinase-like ATPases CGP94_01298 SM00433 TopoisomeraseII CGP94_01299 SM00434 DNA Topoisomerase IV CGP94_01301 SM01061 CAT RNA binding domain CGP94_01321 SM00382 ATPases associated with a variety of cellular activities CGP94_01322 SM00382 ATPases associated with a variety of cellular activities CGP94_01328 SM00382 ATPases associated with a variety of cellular activities CGP94_01333 SM00382 ATPases associated with a variety of cellular activities CGP94_01335 SM00859 Semialdehyde dehydrogenase, NAD binding domain CGP94_01336 SM01130 CGP94_01336 CGP94_01340 SM01005 Alanine racemase, C-terminal domain CGP94_01344 SM00357 Cold shock protein domain CGP94_01350 SM00327 von Willebrand factor (vWF) type A domain CGP94_01355 SM00861 Transketolase, pyrimidine binding domain CGP94_01356 SM00387 Histidine kinase-like ATPases CGP94_01356 SM00388 His Kinase A (phosphoacceptor) domain CGP94_01357 SM00448 cheY-homologous receiver domain CGP94_01357 SM00862 Transcriptional regulatory protein, C terminal CGP94_01359 SM00014 Acid phosphatase homologues CGP94_01362 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CGP94_01362 SM00245 tail specific protease CGP94_01371 SM00567 E-Z type HEAT repeats CGP94_01371 SM00932 Scaffold protein Nfu/NifU N terminal CGP94_01372 SM00932 Scaffold protein Nfu/NifU N terminal CGP94_01380 SM01002 Alanine dehydrogenase/PNT, C-terminal domain CGP94_01380 SM01003 Alanine dehydrogenase/PNT, N-terminal domain CGP94_01381 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs CGP94_01381 SM00475 5'-3' exonuclease CGP94_01385 SM00981 CGP94_01385 CGP94_01393 SM00478 endonuclease III CGP94_01393 SM00525 CGP94_01393 CGP94_01396 SM00479 CGP94_01396 CGP94_01396 SM00491 CGP94_01396 CGP94_01403 SM00914 CGP94_01403 CGP94_01404 SM00028 Tetratricopeptide repeats CGP94_01409 SM00562 CGP94_01409 CGP94_01413 SM00411 bacterial (prokaryotic) histone like domain CGP94_01416 SM00316 Ribosomal protein S1-like RNA-binding domain CGP94_01418 SM00870 CGP94_01418 CGP94_01420 SM00257 Lysin motif CGP94_01421 SM00487 DEAD-like helicases superfamily CGP94_01421 SM00490 helicase superfamily c-terminal domain CGP94_01432 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CGP94_01432 SM00387 Histidine kinase-like ATPases CGP94_01432 SM00388 His Kinase A (phosphoacceptor) domain CGP94_01433 SM00448 cheY-homologous receiver domain CGP94_01433 SM00862 Transcriptional regulatory protein, C terminal CGP94_01434 SM00363 S4 RNA-binding domain CGP94_01447 SM00342 helix_turn_helix, arabinose operon control protein CGP94_01447 SM00871 Bacterial transcription activator, effector binding domain CGP94_01448 SM00642 Alpha-amylase domain CGP94_01449 SM00354 helix_turn _helix lactose operon repressor CGP94_01451 SM01350 CGP94_01451 CGP94_01458 SM00861 Transketolase, pyrimidine binding domain CGP94_01468 SM00878 Biotin carboxylase C-terminal domain CGP94_01470 SM00841 Elongation factor P, C-terminal CGP94_01470 SM01185 CGP94_01470 CGP94_01475 SM00450 Rhodanese Homology Domain CGP94_01486 SM00849 Metallo-beta-lactamase superfamily CGP94_01496 SM00382 ATPases associated with a variety of cellular activities CGP94_01497 SM00518 AP endonuclease family 2 CGP94_01498 SM00487 DEAD-like helicases superfamily CGP94_01498 SM00490 helicase superfamily c-terminal domain CGP94_01502 SM00400 zinc finger CGP94_01502 SM00493 CGP94_01502 CGP94_01504 SM00116 Domain in cystathionine beta-synthase and other proteins. CGP94_01516 SM00729 Elongator protein 3, MiaB family, Radical SAM CGP94_01519 SM00271 DnaJ molecular chaperone homology domain CGP94_01523 SM00729 Elongator protein 3, MiaB family, Radical SAM CGP94_01524 SM00838 Elongation factor G C-terminus CGP94_01527 SM00849 Metallo-beta-lactamase superfamily CGP94_01529 SM00278 Helix-hairpin-helix DNA-binding motif class 1 CGP94_01532 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CGP94_01534 SM01103 CGP94_01534 CGP94_01545 SM00878 Biotin carboxylase C-terminal domain CGP94_01547 SM00797 Allophanate hydrolase subunit 2 CGP94_01548 SM00796 Allophanate hydrolase subunit 1 CGP94_01555 SM00732 Likely ribonuclease with RNase H fold. CGP94_01557 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain CGP94_01558 SM00382 ATPases associated with a variety of cellular activities CGP94_01559 SM00028 Tetratricopeptide repeats CGP94_01566 SM00382 ATPases associated with a variety of cellular activities CGP94_01570 SM00287 Bacterial SH3 domain homologues CGP94_01570 SM00646 CGP94_01570 CGP94_01572 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CGP94_01572 SM00954 Region found in RelA / SpoT proteins CGP94_01576 SM01323 CGP94_01576 CGP94_01579 SM00382 ATPases associated with a variety of cellular activities CGP94_01580 SM00278 Helix-hairpin-helix DNA-binding motif class 1 CGP94_01599 SM01004 Delta-aminolevulinic acid dehydratase CGP94_01605 SM00382 ATPases associated with a variety of cellular activities CGP94_01605 SM00994 ClpX C4-type zinc finger CGP94_01605 SM01086 C-terminal, D2-small domain, of ClpB protein CGP94_01613 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain CGP94_01617 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CGP94_01619 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain CGP94_01619 SM01232 CGP94_01619 CGP94_01620 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs CGP94_01620 SM00474 3'-5' exonuclease CGP94_01620 SM00475 5'-3' exonuclease CGP94_01620 SM00482 DNA polymerase A domain CGP94_01622 SM00387 Histidine kinase-like ATPases CGP94_01622 SM00388 His Kinase A (phosphoacceptor) domain CGP94_01623 SM00448 cheY-homologous receiver domain CGP94_01623 SM00862 Transcriptional regulatory protein, C terminal CGP94_01624 SM01329 CGP94_01624 CGP94_01631 SM00919 Malic enzyme, NAD binding domain CGP94_01631 SM01274 CGP94_01631 CGP94_01632 SM00481 DNA polymerase alpha chain like domain CGP94_01634 SM00116 Domain in cystathionine beta-synthase and other proteins. CGP94_01636 SM00849 Metallo-beta-lactamase superfamily CGP94_01638 SM01002 Alanine dehydrogenase/PNT, C-terminal domain CGP94_01638 SM01003 Alanine dehydrogenase/PNT, N-terminal domain CGP94_01644 SM00981 CGP94_01644 CGP94_01648 SM00363 S4 RNA-binding domain CGP94_01648 SM01390 CGP94_01648 CGP94_01655 SM00563 Phosphate acyltransferases CGP94_01656 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CGP94_01657 SM00363 S4 RNA-binding domain CGP94_01659 SM00725 NEAr Transporter domain CGP94_01665 SM00354 helix_turn _helix lactose operon repressor CGP94_01666 SM00830 Chorismate mutase type II CGP94_01670 SM00843 CGP94_01670 CGP94_01676 SM00849 Metallo-beta-lactamase superfamily CGP94_01685 SM00363 S4 RNA-binding domain CGP94_01689 SM00450 Rhodanese Homology Domain CGP94_01692 SM00729 Elongator protein 3, MiaB family, Radical SAM CGP94_01694 SM00347 helix_turn_helix multiple antibiotic resistance protein CGP94_01702 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CGP94_01704 SM00226 Low molecular weight phosphatase family CGP94_01705 SM00047 Lysozyme subfamily 2 CGP94_01721 SM01234 CGP94_01721 CGP94_01725 SM00894 Excalibur calcium-binding domain CGP94_01774 SM00382 ATPases associated with a variety of cellular activities CGP94_01779 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CGP94_01784 SM00530 Helix-turn-helix XRE-family like proteins CGP94_01785 SM00421 helix_turn_helix, Lux Regulon CGP94_01785 SM00448 cheY-homologous receiver domain CGP94_01795 SM00382 ATPases associated with a variety of cellular activities CGP94_01796 SM00062 Bacterial periplasmic substrate-binding proteins CGP94_01833 SM00382 ATPases associated with a variety of cellular activities CGP94_01835 SM00478 endonuclease III CGP94_01850 SM00226 Low molecular weight phosphatase family CGP94_01853 SM00421 helix_turn_helix, Lux Regulon CGP94_01853 SM00448 cheY-homologous receiver domain CGP94_01854 SM00387 Histidine kinase-like ATPases CGP94_01863 SM00479 CGP94_01863 CGP94_01867 SM00046 Diacylglycerol kinase catalytic domain (presumed) CGP94_01868 SM00845 GatB domain CGP94_01876 SM00278 Helix-hairpin-helix DNA-binding motif class 1 CGP94_01876 SM00292 breast cancer carboxy-terminal domain CGP94_01876 SM00532 Ligase N family CGP94_01880 SM00998 Adenylosuccinate lyase C-terminus CGP94_01890 SM00710 Parallel beta-helix repeats CGP94_01892 SM01131 CGP94_01892 CGP94_01903 SM00382 ATPases associated with a variety of cellular activities CGP94_01905 SM00382 ATPases associated with a variety of cellular activities CGP94_01906 SM00345 helix_turn_helix gluconate operon transcriptional repressor CGP94_01912 SM00287 Bacterial SH3 domain homologues CGP94_01923 SM00635 Bacterial Ig-like domain 2 CGP94_01935 SM00507 HNH nucleases CGP94_01972 SM00530 Helix-turn-helix XRE-family like proteins CGP94_01987 SM00883 Chaperonin 10 Kd subunit CGP94_01992 SM00793 Accessory gene regulator B CGP94_01993 SM00794 Staphylococcal AgrD protein CGP94_01995 SM00448 cheY-homologous receiver domain CGP94_01995 SM00850 LytTr DNA-binding domain CGP94_01997 SM00640 Glycosyl hydrolases family 32 CGP94_01998 SM00354 helix_turn _helix lactose operon repressor CGP94_02002 SM00881 CoA binding domain CGP94_02003 SM00382 ATPases associated with a variety of cellular activities CGP94_02004 SM00534 ATPase domain of DNA mismatch repair MUTS family CGP94_02013 SM00917 LeuA allosteric (dimerisation) domain CGP94_02014 SM01329 CGP94_02014 CGP94_02020 SM00731 SprT homologues. CGP94_02021 SM00316 Ribosomal protein S1-like RNA-binding domain CGP94_02021 SM00732 Likely ribonuclease with RNase H fold. CGP94_02025 SM00331 Sigma factor PP2C-like phosphatases CGP94_02025 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain CGP94_02028 SM01005 Alanine racemase, C-terminal domain CGP94_02036 SM00387 Histidine kinase-like ATPases CGP94_02036 SM00388 His Kinase A (phosphoacceptor) domain CGP94_02037 SM00448 cheY-homologous receiver domain CGP94_02037 SM00862 Transcriptional regulatory protein, C terminal CGP94_02038 SM00487 DEAD-like helicases superfamily CGP94_02038 SM00490 helicase superfamily c-terminal domain CGP94_02045 SM00155 Phospholipase D. Active site motifs. CGP94_02046 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CGP94_02059 SM00382 ATPases associated with a variety of cellular activities CGP94_02071 SM00226 Low molecular weight phosphatase family CGP94_02074 SM00937 CGP94_02074 CGP94_02077 SM00357 Cold shock protein domain CGP94_02077 SM00382 ATPases associated with a variety of cellular activities CGP94_02077 SM00959 Rho termination factor, N-terminal domain CGP94_02093 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain CGP94_02094 SM01133 CGP94_02094 CGP94_02102 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CGP94_02107 SM00382 ATPases associated with a variety of cellular activities CGP94_02144 SM00829 Enoylreductase CGP94_02145 SM00829 Enoylreductase CGP94_02150 SM01133 CGP94_02150 CGP94_02154 SM00420 helix_turn_helix, Deoxyribose operon repressor CGP94_02154 SM01134 CGP94_02154 CGP94_02159 SM00422 helix_turn_helix, mercury resistance CGP94_02171 SM00382 ATPases associated with a variety of cellular activities CGP94_02172 SM00382 ATPases associated with a variety of cellular activities CGP94_02176 SM00662 RNA polymerases D CGP94_02180 SM00316 Ribosomal protein S1-like RNA-binding domain CGP94_02191 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. CGP94_02192 SM01374 CGP94_02192 CGP94_02196 SM00322 K homology RNA-binding domain CGP94_02199 SM01382 CGP94_02199 CGP94_02199 SM01383 CGP94_02199 CGP94_02203 SM01403 CGP94_02203 CGP94_02206 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain CGP94_02206 SM00437 Bacterial DNA topoisomerase I DNA-binding domain CGP94_02206 SM00493 CGP94_02206 CGP94_02216 SM00347 helix_turn_helix multiple antibiotic resistance protein CGP94_02219 SM00729 Elongator protein 3, MiaB family, Radical SAM CGP94_02224 SM00852 Probable molybdopterin binding domain CGP94_02226 SM00852 Probable molybdopterin binding domain CGP94_02228 SM00382 ATPases associated with a variety of cellular activities CGP94_02241 SM00988 UreE urease accessory protein, N-terminal domain CGP94_02248 SM00342 helix_turn_helix, arabinose operon control protein CGP94_02256 SM00047 Lysozyme subfamily 2 CGP94_02259 SM00926 Molybdopterin oxidoreductase Fe4S4 domain CGP94_02259 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region CGP94_02262 SM00420 helix_turn_helix, Deoxyribose operon repressor CGP94_02290 SM00382 ATPases associated with a variety of cellular activities CGP94_02306 SM00347 helix_turn_helix multiple antibiotic resistance protein CGP94_02308 SM00382 ATPases associated with a variety of cellular activities CGP94_02310 SM00448 cheY-homologous receiver domain CGP94_02310 SM00862 Transcriptional regulatory protein, C terminal CGP94_02311 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CGP94_02311 SM00387 Histidine kinase-like ATPases CGP94_02311 SM00388 His Kinase A (phosphoacceptor) domain CGP94_02312 SM00850 LytTr DNA-binding domain CGP94_02319 SM00829 Enoylreductase CGP94_02328 SM00342 helix_turn_helix, arabinose operon control protein CGP94_02333 SM00347 helix_turn_helix multiple antibiotic resistance protein CGP94_02337 SM00422 helix_turn_helix, mercury resistance CGP94_02338 SM00421 helix_turn_helix, Lux Regulon CGP94_02338 SM00448 cheY-homologous receiver domain CGP94_02339 SM00387 Histidine kinase-like ATPases CGP94_02344 SM00926 Molybdopterin oxidoreductase Fe4S4 domain CGP94_02359 SM00382 ATPases associated with a variety of cellular activities CGP94_02361 SM00062 Bacterial periplasmic substrate-binding proteins CGP94_02361 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. CGP94_02364 SM00855 Phosphoglycerate mutase family CGP94_02373 SM00729 Elongator protein 3, MiaB family, Radical SAM CGP94_02373 SM00876 Biotin and Thiamin Synthesis associated domain CGP94_02376 SM00382 ATPases associated with a variety of cellular activities CGP94_02377 SM00382 ATPases associated with a variety of cellular activities CGP94_02382 SM00871 Bacterial transcription activator, effector binding domain CGP94_02395 SM00116 Domain in cystathionine beta-synthase and other proteins. CGP94_02395 SM00382 ATPases associated with a variety of cellular activities CGP94_02401 SM00382 ATPases associated with a variety of cellular activities CGP94_02409 SM00382 ATPases associated with a variety of cellular activities CGP94_02410 SM00382 ATPases associated with a variety of cellular activities CGP94_02435 SM00927 DNA mismatch repair enzyme MutH CGP94_02460 SM00345 helix_turn_helix gluconate operon transcriptional repressor CGP94_02460 SM00895 CGP94_02460 CGP94_02461 SM00422 helix_turn_helix, mercury resistance CGP94_02462 SM00954 Region found in RelA / SpoT proteins CGP94_02470 SM00347 helix_turn_helix multiple antibiotic resistance protein CGP94_02471 SM00382 ATPases associated with a variety of cellular activities CGP94_02477 SM00347 helix_turn_helix multiple antibiotic resistance protein CGP94_02483 SM00382 ATPases associated with a variety of cellular activities CGP94_02507 SM00382 ATPases associated with a variety of cellular activities CGP94_02507 SM01086 C-terminal, D2-small domain, of ClpB protein CGP94_02510 SM00899 CGP94_02510 CGP94_02514 SM01266 CGP94_02514 CGP94_02555 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain CGP94_02585 SM00382 ATPases associated with a variety of cellular activities CGP94_02586 SM00387 Histidine kinase-like ATPases CGP94_02587 SM00448 cheY-homologous receiver domain CGP94_02587 SM00862 Transcriptional regulatory protein, C terminal CGP94_02589 SM00098 Alkaline phosphatase homologues CGP94_02591 SM00347 helix_turn_helix multiple antibiotic resistance protein CGP94_02607 SM00047 Lysozyme subfamily 2 CGP94_02614 SM00957 SecA DEAD-like domain CGP94_02614 SM00958 SecA preprotein cross-linking domain CGP94_02621 SM00903 Flavin reductase like domain CGP94_02626 SM00903 Flavin reductase like domain CGP94_02649 SM00867 YceI-like domain CGP94_02651 SM00450 Rhodanese Homology Domain CGP94_02661 SM00382 ATPases associated with a variety of cellular activities CGP94_02664 SM00357 Cold shock protein domain CGP94_02666 SM00530 Helix-turn-helix XRE-family like proteins CGP94_02669 SM00470 ParB-like nuclease domain CGP94_02671 SM01228 CGP94_02671