locus-tag	class	description
CSC52_0001	COG1475	DNA binding
CSC52_0002	COG0019	diaminopimelate decarboxylase activity
CSC52_0004	COG4264	IucA IucC family
CSC52_0005	COG4264	IucA IucC family
CSC52_0006	COG2814	Major facilitator Superfamily
CSC52_0007	COG4264	IucA IucC family
CSC52_0008	COG2423	ornithine cyclodeaminase activity
CSC52_0010	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
CSC52_0011	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CSC52_0012	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CSC52_0015	COG1620	l-lactate permease
CSC52_0018	COG0697	spore germination
CSC52_0019	COG4716	Myosin-crossreactive antigen
CSC52_0020	COG1283	sodium-dependent phosphate transmembrane transporter activity
CSC52_0023	COG1473	amidohydrolase
CSC52_0030	COG0823	Involved in the tonB-independent uptake of proteins
CSC52_0038	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
CSC52_0039	COG2210	Belongs to the sulfur carrier protein TusA family
CSC52_0040	COG1937	Protein conserved in bacteria
CSC52_0041	COG0730	response to heat
CSC52_0052	COG2205	protein histidine kinase activity
CSC52_0053	COG0745	RESPONSE REGULATOR receiver
CSC52_0055	COG1288	antiporter activity
CSC52_0059	COG2801	Transposase and inactivated derivatives
CSC52_0068	COG2003	Belongs to the UPF0758 family
CSC52_0076	COG2226	methyltransferase
CSC52_0077	COG0730	response to heat
CSC52_0078	COG1937	Protein conserved in bacteria
CSC52_0079	COG2210	Belongs to the sulfur carrier protein TusA family
CSC52_0080	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
CSC52_0082	COG1940	carbohydrate kinase activity
CSC52_0082	COG1846	Transcriptional regulator
CSC52_0084	COG4219	Peptidase M56
CSC52_0084	COG2602	Beta-lactamase
CSC52_0086	COG2030	dehydratase
CSC52_0087	COG0584	glycerophosphoryl diester phosphodiesterase
CSC52_0088	COG3316	Transposase and inactivated derivatives
CSC52_0094	COG3316	Transposase and inactivated derivatives
CSC52_0099	COG0737	Belongs to the 5'-nucleotidase family
CSC52_0100	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
CSC52_0108	COG0305	Participates in initiation and elongation during chromosome replication
CSC52_0110	COG3887	signaling protein consisting of a modified GGDEF domain and a DHH domain
CSC52_0112	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
CSC52_0117	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
CSC52_0121	COG2501	S4 domain
CSC52_0129	COG1475	DNA binding
CSC52_0133	COG1278	Cold shock
CSC52_0135	COG0577	efflux transmembrane transporter activity
CSC52_0136	COG1136	(ABC) transporter
CSC52_0139	COG3376	Belongs to the NiCoT transporter (TC 2.A.52) family
CSC52_0141	COG2962	Rard protein
CSC52_0142	COG0471	metal ion transport
CSC52_0159	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
CSC52_0167	COG3936	Protein involved in polysaccharide intercellular adhesin (PIA) synthesis biofilm formation
CSC52_0168	COG0726	polysaccharide deacetylase
CSC52_0170	COG1215	transferase activity, transferring glycosyl groups
CSC52_0171	COG1309	transcriptional regulator
CSC52_0177	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
CSC52_0181	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
CSC52_0186	COG1073	alpha beta
CSC52_0189	COG0438	transferase activity, transferring glycosyl groups
CSC52_0192	COG1535	isochorismatase
CSC52_0192	COG3433	isochorismatase activity
CSC52_0193	COG3942	CHAP domain
CSC52_0193	COG1705	Flagellar rod assembly protein muramidase FlgJ
CSC52_0195	COG1482	cell wall glycoprotein biosynthetic process
CSC52_0196	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
CSC52_0196	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
CSC52_0196	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
CSC52_0197	COG3711	transcriptional antiterminator
CSC52_0197	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
CSC52_0208	COG4932	domain protein
CSC52_0208	COG2931	calcium- and calmodulin-responsive adenylate cyclase activity
CSC52_0210	COG1846	Transcriptional regulator
CSC52_0211	COG1785	Belongs to the alkaline phosphatase family
CSC52_0213	COG0745	RESPONSE REGULATOR receiver
CSC52_0214	COG2205	protein histidine kinase activity
CSC52_0215	COG1136	(ABC) transporter
CSC52_0218	COG0386	Belongs to the glutathione peroxidase family
CSC52_0219	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
CSC52_0221	COG2851	Citrate transporter
CSC52_0224	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
CSC52_0225	COG1510	regulation of RNA biosynthetic process
CSC52_0230	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
CSC52_0236	COG0531	amino acid
CSC52_0238	COG3527	Alpha-acetolactate decarboxylase
CSC52_0239	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
CSC52_0250	COG0167	dihydroorotate dehydrogenase activity
CSC52_0272	COG2755	lipolytic protein G-D-S-L family
CSC52_0272	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
CSC52_0279	COG0436	Aminotransferase
CSC52_0288	COG2409	Drug exporters of the RND superfamily
CSC52_0293	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
CSC52_0294	COG3425	synthase
CSC52_0296	COG3942	CHAP domain
CSC52_0298	COG0583	DNA-binding transcription factor activity
CSC52_0300	COG1346	cytolysis
CSC52_0301	COG0028	Belongs to the TPP enzyme family
CSC52_0305	COG0657	acetylesterase activity
CSC52_0306	COG0697	spore germination
CSC52_0308	COG1760	l-serine dehydratase
CSC52_0309	COG1760	l-serine dehydratase
CSC52_0311	COG3764	Sortase (surface protein transpeptidase)
CSC52_0313	COG1131	(ABC) transporter
CSC52_0314	COG0561	phosphatase activity
CSC52_0317	COG2514	catechol 2,3-dioxygenase activity
CSC52_0319	COG1846	Transcriptional regulator
CSC52_0320	COG0346	lactoylglutathione lyase activity
CSC52_0321	COG0400	carboxylic ester hydrolase activity
CSC52_0322	COG3949	Membrane
CSC52_0325	COG1131	(ABC) transporter
CSC52_0326	COG0586	Pfam SNARE associated Golgi protein
CSC52_0327	COG2271	Major facilitator Superfamily
CSC52_0329	COG4876	unkown
CSC52_0330	COG2357	RelA SpoT domain protein
CSC52_0331	COG0789	Transcriptional regulator
CSC52_0332	COG1802	Transcriptional regulator
CSC52_0333	COG1070	Carbohydrate kinase
CSC52_0339	COG1846	Transcriptional regulator
CSC52_0346	COG0494	nUDIX hydrolase
CSC52_0362	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
CSC52_0363	COG2978	secondary active p-aminobenzoyl-glutamate transmembrane transporter activity
CSC52_0364	COG1028	Short-chain dehydrogenase reductase Sdr
CSC52_0365	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
CSC52_0377	COG0069	glutamate synthase activity
CSC52_0378	COG4808	Protein conserved in bacteria
CSC52_0381	COG1363	Peptidase, m42
CSC52_0382	COG4619	ABC transporter
CSC52_0383	COG0390	transport system, permease component
CSC52_0384	COG2814	Major facilitator Superfamily
CSC52_0385	COG2272	Belongs to the type-B carboxylesterase lipase family
CSC52_0387	COG0531	amino acid
CSC52_0388	COG4430	Bacteriocin-protection, YdeI or OmpD-Associated
CSC52_0390	COG1174	glycine betaine transport
CSC52_0392	COG1174	glycine betaine transport
CSC52_0394	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
CSC52_0397	COG0531	amino acid
CSC52_0399	COG1113	amino acid transport
CSC52_0403	COG2814	Major facilitator Superfamily
CSC52_0405	COG1929	Belongs to the glycerate kinase type-1 family
CSC52_0408	COG1132	(ABC) transporter
CSC52_0409	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
CSC52_0410	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
CSC52_0412	COG0156	8-amino-7-oxononanoate synthase activity
CSC52_0419	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
CSC52_0421	COG2814	Major facilitator Superfamily
CSC52_0422	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CSC52_0423	COG0765	amino acid transport
CSC52_0424	COG1126	abc transporter atp-binding protein
CSC52_0430	COG0803	Belongs to the bacterial solute-binding protein 9 family
CSC52_0430	COG3443	Belongs to the bacterial solute-binding protein 9 family
CSC52_0433	COG2116	formate transmembrane transporter activity
CSC52_0434	COG0454	-acetyltransferase
CSC52_0436	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
CSC52_0437	COG2146	nitrite reductase [NAD(P)H] activity
CSC52_0439	COG5013	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
CSC52_0440	COG1140	nitrate reductase beta subunit
CSC52_0442	COG2181	nitrate reductase activity
CSC52_0446	COG0789	Transcriptional regulator
CSC52_0454	COG3871	stress protein (general stress protein 26)
CSC52_0457	COG1263	PTS System
CSC52_0457	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
CSC52_0460	COG1511	domain protein
CSC52_0465	COG0604	alcohol dehydrogenase
CSC52_0469	COG1620	l-lactate permease
CSC52_0481	COG2814	Major facilitator Superfamily
CSC52_0483	COG1566	PFAM secretion protein HlyD family protein
CSC52_0484	COG2814	Major facilitator Superfamily
CSC52_0486	COG0657	acetylesterase activity
CSC52_0489	COG0598	Magnesium transport protein CorA
CSC52_0491	COG0786	glutamate:sodium symporter activity
CSC52_0493	COG3152	Membrane
CSC52_0494	COG4152	abc transporter atp-binding protein
CSC52_0495	COG1668	transmembrane transport
CSC52_0499	COG2258	MOSC domain
CSC52_0505	COG0583	DNA-binding transcription factor activity
CSC52_0508	COG1473	amidohydrolase
CSC52_0509	COG1028	Short-chain dehydrogenase reductase Sdr
CSC52_0514	COG1737	Transcriptional regulator
CSC52_0515	COG1263	PTS System
CSC52_0515	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
CSC52_0518	COG0385	Bile acid
CSC52_0519	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
CSC52_0523	COG1113	amino acid transport
CSC52_0539	COG1757	Na H antiporter
CSC52_0540	COG3942	CHAP domain
CSC52_0552	COG4413	Urea transporter
CSC52_0553	COG1960	acyl-CoA dehydrogenase activity
CSC52_0556	COG1268	BioY protein
CSC52_0559	COG0725	ABC transporter, periplasmic molybdate-binding protein
CSC52_0560	COG4149	molybdate abc transporter
CSC52_0561	COG4148	Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system
CSC52_0562	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
CSC52_0566	COG1763	Mo-molybdopterin cofactor biosynthetic process
CSC52_0576	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
CSC52_0584	COG2252	PERMEase
CSC52_0607	COG0201	protein transport
CSC52_0628	COG0028	Belongs to the TPP enzyme family
CSC52_0629	COG3527	Alpha-acetolactate decarboxylase
CSC52_0633	COG5492	domain, Protein
CSC52_0635	COG0789	Transcriptional regulator
CSC52_0636	COG0656	L-ascorbic acid biosynthetic process
CSC52_0648	COG0582	viral genome integration into host DNA
CSC52_0708	COG5280	Phage tail tape measure protein TP901
CSC52_0708	COG3953	SLT domain
CSC52_0721	COG0860	N-Acetylmuramoyl-L-alanine amidase
CSC52_0721	COG1388	LysM domain
CSC52_0724	COG2130	NADP-dependent
CSC52_0726	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
CSC52_0731	COG2814	Major facilitator Superfamily
CSC52_0732	COG4264	IucA IucC family
CSC52_0733	COG3457	Alanine racemase
CSC52_0734	COG4594	ABC-type Fe3 -citrate transport system, periplasmic component
CSC52_0735	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CSC52_0736	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CSC52_0739	COG1988	membrane-bound metal-dependent
CSC52_0741	COG1272	protein, Hemolysin III
CSC52_0744	COG2814	Major facilitator Superfamily
CSC52_0745	COG0489	protein tyrosine kinase activity
CSC52_0756	COG1624	Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
CSC52_0762	COG3711	transcriptional antiterminator
CSC52_0766	COG1119	ATPase activity
CSC52_0772	COG0640	Transcriptional regulator
CSC52_0773	COG0702	epimerase
CSC52_0774	COG1482	cell wall glycoprotein biosynthetic process
CSC52_0778	COG0783	Belongs to the Dps family
CSC52_0779	COG0813	purine-nucleoside phosphorylase activity
CSC52_0788	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
CSC52_0796	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
CSC52_0800	COG2890	protein-(glutamine-N5) methyltransferase activity
CSC52_0801	COG0009	L-threonylcarbamoyladenylate synthase
CSC52_0806	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
CSC52_0820	COG0629	single-stranded DNA binding
CSC52_0828	COG1418	mRNA catabolic process
CSC52_0830	COG1937	Protein conserved in bacteria
CSC52_0833	COG0772	Belongs to the SEDS family
CSC52_0834	COG0772	Belongs to the SEDS family
CSC52_0836	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
CSC52_0840	COG0745	RESPONSE REGULATOR receiver
CSC52_0841	COG2205	protein histidine kinase activity
CSC52_0846	COG3428	Bacterial PH domain
CSC52_0852	COG2208	phosphoserine phosphatase activity
CSC52_0853	COG1366	Belongs to the anti-sigma-factor antagonist family
CSC52_0855	COG1191	sigma factor activity
CSC52_0856	COG2183	response to ionizing radiation
CSC52_0870	COG0028	Belongs to the TPP enzyme family
CSC52_0872	COG0802	atpase or kinase
CSC52_0873	COG1214	PFAM Peptidase M22, glycoprotease
CSC52_0874	COG0456	acetyltransferase
CSC52_0876	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
CSC52_0878	COG0488	(ABC) transporter
CSC52_0880	COG2391	methyltransferase activity
CSC52_0881	COG0425	Belongs to the sulfur carrier protein TusA family
CSC52_0882	COG0004	ammonium transporteR
CSC52_0883	COG1609	Transcriptional regulator
CSC52_0884	COG1621	beta-fructofuranosidase activity
CSC52_0885	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
CSC52_0897	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
CSC52_0901	COG3568	Endonuclease Exonuclease Phosphatase
CSC52_0941	COG0740	serine-type endopeptidase activity
CSC52_0952	COG0739	heme binding
CSC52_0960	COG5632	N-Acetylmuramoyl-L-alanine amidase
CSC52_0960	COG1388	LysM domain
CSC52_0962	COG0860	N-Acetylmuramoyl-L-alanine amidase
CSC52_0962	COG1388	LysM domain
CSC52_0966	COG3568	Endonuclease Exonuclease Phosphatase
CSC52_0971	COG1725	Transcriptional regulator
CSC52_0974	COG1131	(ABC) transporter
CSC52_0984	COG1012	belongs to the aldehyde dehydrogenase family
CSC52_0987	COG1335	isochorismatase
CSC52_0989	COG0471	metal ion transport
CSC52_0990	COG0077	Prephenate dehydratase
CSC52_0992	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
CSC52_0999	COG4496	protein, YerC YecD
CSC52_1003	COG4851	CamS sex pheromone cAM373 precursor
CSC52_1025	COG1295	ribonuclease BN
CSC52_1029	COG2309	aminopeptidase activity
CSC52_1030	COG1607	acyl-coa hydrolase
CSC52_1031	COG0535	radical SAM domain protein
CSC52_1037	COG1388	LysM domain
CSC52_1037	COG1134	teichoic acid transport
CSC52_1039	COG1988	membrane-bound metal-dependent
CSC52_1043	COG4129	membrane
CSC52_1045	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
CSC52_1046	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
CSC52_1083	COG0765	amino acid transport
CSC52_1084	COG1126	abc transporter atp-binding protein
CSC52_1085	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
CSC52_1091	COG0564	pseudouridine synthase activity
CSC52_1092	COG4585	Histidine kinase
CSC52_1092	COG2203	Gaf domain
CSC52_1093	COG2197	response regulator
CSC52_1097	COG0420	3'-5' exonuclease activity
CSC52_1103	COG0537	adenosine 5'-monophosphoramidase activity
CSC52_1104	COG1131	(ABC) transporter
CSC52_1158	COG2816	NAD+ diphosphatase activity
CSC52_1159	COG1506	peptidase
CSC52_1164	COG0656	L-ascorbic acid biosynthetic process
CSC52_1168	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
CSC52_1170	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
CSC52_1176	COG3266	domain, Protein
CSC52_1176	COG5632	N-Acetylmuramoyl-L-alanine amidase
CSC52_1176	COG4193	domain, Protein
CSC52_1179	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
CSC52_1179	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
CSC52_1184	COG2267	carboxylic ester hydrolase activity
CSC52_1188	COG1846	Transcriptional regulator
CSC52_1189	COG2519	Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA
CSC52_1190	COG1242	4 iron, 4 sulfur cluster binding
CSC52_1191	COG2814	Major facilitator Superfamily
CSC52_1195	COG2081	HI0933 family
CSC52_1196	COG2244	polysaccharide biosynthetic process
CSC52_1197	COG1187	pseudouridine synthase activity
CSC52_1201	COG0510	thiamine kinase activity
CSC52_1203	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
CSC52_1205	COG1363	Peptidase, m42
CSC52_1206	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
CSC52_1208	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
CSC52_1209	COG1674	ftsk spoiiie
CSC52_1213	COG1605	Chorismate mutase
CSC52_1213	COG2876	3-deoxy-7-phosphoheptulonate synthase activity
CSC52_1216	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
CSC52_1222	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
CSC52_1223	COG0204	Acyl-transferase
CSC52_1224	COG1263	PTS System
CSC52_1224	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
CSC52_1226	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
CSC52_1227	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
CSC52_1228	COG1764	response to oxidative stress
CSC52_1229	COG0584	glycerophosphoryl diester phosphodiesterase
CSC52_1231	COG1956	GAF domain-containing protein
CSC52_1234	COG1104	cysteine desulfurase activity
CSC52_1238	COG0827	DNA restriction-modification system
CSC52_1245	COG4109	DRTGG domain
CSC52_1246	COG0618	3'(2'),5'-bisphosphate nucleotidase activity
CSC52_1248	COG0281	malic enzyme
CSC52_1253	COG1113	amino acid transport
CSC52_1254	COG0372	Belongs to the citrate synthase family
CSC52_1256	COG0745	RESPONSE REGULATOR receiver
CSC52_1257	COG5002	protein histidine kinase activity
CSC52_1260	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
CSC52_1260	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
CSC52_1261	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
CSC52_1266	COG1484	DNA-dependent DNA replication
CSC52_1268	COG0833	amino acid
CSC52_1272	COG4112	unkown
CSC52_1278	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
CSC52_1281	COG0113	porphobilinogen synthase activity
CSC52_1285	COG2818	Glycosylase
CSC52_1287	COG0285	dihydrofolate synthase activity
CSC52_1288	COG1989	Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue
CSC52_1298	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
CSC52_1305	COG2868	ribosomal protein
CSC52_1313	COG1862	Preprotein translocase
CSC52_1314	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
CSC52_1314	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
CSC52_1315	COG4199	Single-strand DNA-specific exonuclease, C terminal domain
CSC52_1315	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
CSC52_1322	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
CSC52_1323	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
CSC52_1324	COG1959	2 iron, 2 sulfur cluster binding
CSC52_1326	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
CSC52_1327	COG1104	cysteine desulfurase activity
CSC52_1330	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
CSC52_1340	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
CSC52_1341	COG1984	allophanate hydrolase subunit 2
CSC52_1342	COG0511	ligase activity, forming carbon-carbon bonds
CSC52_1343	COG0439	Biotin carboxylase
CSC52_1345	COG1914	H( )-stimulated, divalent metal cation uptake system
CSC52_1346	COG3177	Filamentation induced by cAMP protein fic
CSC52_1354	COG2179	HAD superfamily (subfamily IIIA) phosphatase, TIGR01668
CSC52_1355	COG1161	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
CSC52_1357	COG1534	Rna-binding protein
CSC52_1359	COG1713	HD superfamily hydrolase involved in NAD metabolism
CSC52_1360	COG0799	negative regulation of ribosome biogenesis
CSC52_1361	COG2226	methyltransferase
CSC52_1362	COG2183	response to ionizing radiation
CSC52_1363	COG2131	deaminase
CSC52_1364	COG2333	competence protein COMEC
CSC52_1364	COG0658	competence protein
CSC52_1365	COG1466	dna polymerase III delta subunit
CSC52_1368	COG0635	Involved in the biosynthesis of porphyrin-containing compound
CSC52_1374	COG1385	rRNA (uridine-N3-)-methyltransferase activity
CSC52_1375	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
CSC52_1377	COG1030	water channel activity
CSC52_1380	COG1702	phosphate starvation-inducible protein PhoH
CSC52_1383	COG0295	cytidine deaminase activity
CSC52_1387	COG0517	IMP dehydrogenase activity
CSC52_1390	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
CSC52_1391	COG2384	SAM-dependent methyltransferase
CSC52_1393	COG0513	Belongs to the DEAD box helicase family
CSC52_1395	COG1121	(ABC) transporter
CSC52_1396	COG1108	ABC-type Mn2 Zn2 transport systems permease components
CSC52_1397	COG0735	belongs to the Fur family
CSC52_1401	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
CSC52_1403	COG4483	Protein conserved in bacteria
CSC52_1404	COG1940	carbohydrate kinase activity
CSC52_1405	COG0011	TIGRFAM Protein of
CSC52_1406	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
CSC52_1407	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
CSC52_1408	COG1459	type II secretion system
CSC52_1409	COG4537	Required for transformation and DNA binding
CSC52_1417	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
CSC52_1418	COG0095	Lipoate-protein ligase
CSC52_1421	COG0006	proline dipeptidase activity
CSC52_1423	COG0511	ligase activity, forming carbon-carbon bonds
CSC52_1424	COG0439	Biotin carboxylase
CSC52_1425	COG1302	Protein conserved in bacteria
CSC52_1431	COG0497	DNA recombination
CSC52_1432	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
CSC52_1433	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
CSC52_1434	COG0022	dehydrogenase e1 component
CSC52_1435	COG0508	dehydrogenase complex catalyzes the overall conversion of
CSC52_1437	COG4129	membrane
CSC52_1439	COG2195	Cleaves the N-terminal amino acid of tripeptides
CSC52_1443	COG1609	Transcriptional regulator
CSC52_1444	COG0366	Alpha amylase catalytic
CSC52_1446	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
CSC52_1450	COG4221	oxidoreductase activity
CSC52_1452	COG0667	Aldo Keto reductase
CSC52_1453	COG0494	nUDIX hydrolase
CSC52_1454	COG0735	belongs to the Fur family
CSC52_1459	COG1187	pseudouridine synthase activity
CSC52_1460	COG0745	RESPONSE REGULATOR receiver
CSC52_1466	COG0582	viral genome integration into host DNA
CSC52_1470	COG2176	DNA-directed DNA polymerase activity
CSC52_1527	COG5280	Phage tail tape measure protein TP901
CSC52_1527	COG3953	SLT domain
CSC52_1542	COG0860	N-Acetylmuramoyl-L-alanine amidase
CSC52_1542	COG1388	LysM domain
CSC52_1543	COG0860	N-Acetylmuramoyl-L-alanine amidase
CSC52_1543	COG1388	LysM domain
CSC52_1551	COG1141	Ferredoxin
CSC52_1553	COG0514	ATP-dependent DNA helicase (RecQ)
CSC52_1555	COG0492	ferredoxin-NADP+ reductase activity
CSC52_1564	COG0142	geranyltranstransferase activity
CSC52_1572	COG4347	Protein of unknown function (DUF1405)
CSC52_1573	COG2738	Putative neutral zinc metallopeptidase
CSC52_1574	COG1694	Mazg nucleotide pyrophosphohydrolase
CSC52_1575	COG0438	transferase activity, transferring glycosyl groups
CSC52_1580	COG3935	DnaD domain protein
CSC52_1581	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
CSC52_1583	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
CSC52_1583	COG4499	WXG100 protein secretion system (Wss), protein YukC
CSC52_1589	COG0116	Belongs to the methyltransferase superfamily
CSC52_1592	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
CSC52_1593	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
CSC52_1596	COG0531	amino acid
CSC52_1603	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
CSC52_1605	COG1413	lyase activity
CSC52_1618	COG0671	phosphoesterase, PA-phosphatase related
CSC52_1626	COG4548	von Willebrand factor, type A
CSC52_1640	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
CSC52_1641	COG0527	aspartate kinase activity
CSC52_1642	COG0488	(ABC) transporter
CSC52_1646	COG0573	inorganic phosphate transmembrane transporter activity
CSC52_1647	COG0581	inorganic phosphate transmembrane transporter activity
CSC52_1649	COG0704	Plays a role in the regulation of phosphate uptake
CSC52_1657	COG0561	phosphatase activity
CSC52_1659	COG2348	transferase activity, transferring amino-acyl groups
CSC52_1666	COG0512	Glutamine amidotransferase of anthranilate synthase
CSC52_1667	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
CSC52_1668	COG1363	Peptidase, m42
CSC52_1670	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
CSC52_1672	COG1316	TRANSCRIPTIONal
CSC52_1673	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
CSC52_1675	COG0628	permease
CSC52_1677	COG1115	amino acid carrier protein
CSC52_1682	COG0824	Thioesterase
CSC52_1685	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
CSC52_1689	COG4846	Membrane protein involved in cytochrome C biogenesis
CSC52_1695	COG2340	Cysteine-rich secretory protein family
CSC52_1701	COG0833	amino acid
CSC52_1705	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
CSC52_1706	COG0460	homoserine dehydrogenase
CSC52_1707	COG0527	aspartate kinase activity
CSC52_1710	COG1525	nuclease
CSC52_1712	COG2197	response regulator
CSC52_1715	COG1131	(ABC) transporter
CSC52_1727	COG0789	Transcriptional regulator
CSC52_1728	COG4100	CystaTHIonine beta-lyase family protein involved in aluminum resistance
CSC52_1731	COG1923	regulation of RNA biosynthetic process
CSC52_1736	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
CSC52_1738	COG1954	Regulates expression of the glpD operon. In the presence of glycerol 3-phosphate (G3P) causes antitermination of transcription of glpD at the inverted repeat of the leader region to enhance its transcription. Binds and stabilizes glpD leader mRNA
CSC52_1745	COG1013	pyruvate-flavodoxin oxidoreductase activity
CSC52_1746	COG1014	Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
CSC52_1746	COG0674	pyruvate-flavodoxin oxidoreductase activity
CSC52_1747	COG1692	metallophosphoesterase
CSC52_1751	COG1546	Belongs to the CinA family
CSC52_1751	COG1058	Belongs to the CinA family
CSC52_1755	COG0300	oxidoreductase activity
CSC52_1756	COG0612	Peptidase, M16
CSC52_1757	COG0612	Peptidase, M16
CSC52_1758	COG2188	Transcriptional regulator
CSC52_1763	COG0196	riboflavin kinase activity
CSC52_1768	COG2740	Nucleic-acid-binding protein implicated in transcription termination
CSC52_1769	COG0195	Participates in both transcription termination and antitermination
CSC52_1787	COG0758	DNA mediated transformation
CSC52_1788	COG0758	DNA mediated transformation
CSC52_1789	COG2348	transferase activity, transferring amino-acyl groups
CSC52_1800	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
CSC52_1802	COG0552	protein localization to endoplasmic reticulum
CSC52_1803	COG1196	nuclear chromosome segregation
CSC52_1812	COG1302	Protein conserved in bacteria
CSC52_1815	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
CSC52_1818	COG0631	protein serine/threonine phosphatase activity
CSC52_1820	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
CSC52_1820	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
CSC52_1823	COG2314	TM2 domain
CSC52_1825	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
CSC52_1826	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
CSC52_1838	COG2233	PERMEase
CSC52_1840	COG0564	pseudouridine synthase activity
CSC52_1842	COG2514	catechol 2,3-dioxygenase activity
CSC52_1844	COG3599	regulation of cell shape
CSC52_1846	COG2302	S4 RNA-binding domain
CSC52_1847	COG0762	integral membrane protein
CSC52_1849	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
CSC52_1851	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
CSC52_1852	COG0849	cell division
CSC52_1853	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
CSC52_1857	COG4839	cell division protein FtsL
CSC52_1862	COG1011	Hydrolase
CSC52_1868	COG1288	antiporter activity
CSC52_1894	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
CSC52_1895	COG1053	succinate dehydrogenase
CSC52_1896	COG2009	succinate dehydrogenase
CSC52_1900	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
CSC52_1900	COG1796	DNA polymerase
CSC52_1906	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
CSC52_1908	COG4509	Sortase family
CSC52_1919	COG0742	ribosomal rna small subunit methyltransferase
CSC52_1923	COG3679	Belongs to the UPF0342 family
CSC52_1928	COG1038	Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second
CSC52_1929	COG0772	Belongs to the SEDS family
CSC52_1931	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
CSC52_1935	COG0483	inositol monophosphate 1-phosphatase activity
CSC52_1940	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
CSC52_1941	COG1177	transmembrane transport
CSC52_1942	COG1176	ABC-type spermidine putrescine transport system, permease component I
CSC52_1954	COG0569	domain protein
CSC52_1955	COG1294	oxidase, subunit
CSC52_1956	COG1271	oxidase subunit
CSC52_1957	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
CSC52_1961	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
CSC52_1964	COG4721	ABC-type cobalt transport system, permease component
CSC52_1965	COG4172	Belongs to the ABC transporter superfamily
CSC52_1966	COG0619	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
CSC52_1974	COG1828	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
CSC52_1977	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
CSC52_1986	COG1316	TRANSCRIPTIONal
CSC52_1988	COG2153	protein acetylation
CSC52_1991	COG3594	Acyltransferase
CSC52_1992	COG0436	Aminotransferase
CSC52_1997	COG2267	carboxylic ester hydrolase activity
CSC52_1999	COG1169	isochorismate synthase
CSC52_2000	COG1575	Belongs to the MenA family. Type 1 subfamily
CSC52_2001	COG0456	acetyltransferase
CSC52_2002	COG2314	TM2 domain
CSC52_2004	COG4594	ABC-type Fe3 -citrate transport system, periplasmic component
CSC52_2012	COG4873	Protein conserved in bacteria
CSC52_2015	COG4903	ComK protein
CSC52_2018	COG0737	Belongs to the 5'-nucleotidase family
CSC52_2019	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
CSC52_2021	COG0861	Integral membrane protein TerC family
CSC52_2030	COG1115	amino acid carrier protein
CSC52_2031	COG0628	permease
CSC52_2033	COG0475	glutathione-regulated potassium exporter activity
CSC52_2033	COG0569	domain protein
CSC52_2034	COG2239	Acts as a magnesium transporter
CSC52_2035	COG0564	pseudouridine synthase activity
CSC52_2037	COG2357	RelA SpoT domain protein
CSC52_2040	COG2346	COG2346, Truncated hemoglobins
CSC52_2042	COG1164	Oligoendopeptidase f
CSC52_2047	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
CSC52_2048	COG0601	transmembrane transport
CSC52_2049	COG4608	Belongs to the ABC transporter superfamily
CSC52_2050	COG0444	Belongs to the ABC transporter superfamily
CSC52_2051	COG0747	negative chemotaxis
CSC52_2052	COG4166	transmembrane transport
CSC52_2053	COG4608	Belongs to the ABC transporter superfamily
CSC52_2054	COG0444	Belongs to the ABC transporter superfamily
CSC52_2055	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
CSC52_2056	COG0601	transmembrane transport
CSC52_2062	COG1881	PFAM PEBP family protein
CSC52_2070	COG0561	phosphatase activity
CSC52_2078	COG0398	Pfam SNARE associated Golgi protein
CSC52_2082	COG0584	glycerophosphoryl diester phosphodiesterase
CSC52_2085	COG1902	pentaerythritol trinitrate reductase activity
CSC52_2086	COG1098	S1 RNA binding domain
CSC52_2097	COG2050	protein possibly involved in aromatic compounds catabolism
CSC52_2098	COG2056	Na+-H+ antiporter family
CSC52_2099	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
CSC52_2101	COG0316	Belongs to the HesB IscA family
CSC52_2103	COG1252	NADH dehydrogenase
CSC52_2104	COG4837	Protein of unknown function (DUF1462)
CSC52_2105	COG0694	Involved in iron-sulfur cluster biogenesis. Binds a 4Fe- 4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe S proteins. Could also act as a scaffold chaperone for damaged Fe S proteins
CSC52_2106	COG3966	Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
CSC52_2108	COG1696	Membrane protein involved in D-alanine export
CSC52_2113	COG2445	Protein of unknown function DUF86
CSC52_2117	COG4470	Protein conserved in bacteria
CSC52_2120	COG0730	response to heat
CSC52_2121	COG0730	response to heat
CSC52_2122	COG1801	Protein of unknown function DUF72
CSC52_2124	COG1253	flavin adenine dinucleotide binding
CSC52_2129	COG1388	LysM domain
CSC52_2129	COG0860	N-Acetylmuramoyl-L-alanine amidase
CSC52_2173	COG1484	DNA-dependent DNA replication
CSC52_2187	COG1396	sequence-specific DNA binding
CSC52_2194	COG0822	iron-sulfur transferase activity
CSC52_2196	COG0719	Fe-S assembly protein
CSC52_2197	COG0396	ATPase activity
CSC52_2200	COG1464	Belongs to the NlpA lipoprotein family
CSC52_2201	COG2011	ABC-type metal ion transport system permease component
CSC52_2204	COG1658	Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
CSC52_2205	COG3878	Protein conserved in bacteria
CSC52_2208	COG1393	Belongs to the ArsC family
CSC52_2209	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
CSC52_2214	COG1279	arginine transmembrane transporter activity
CSC52_2215	COG0406	alpha-ribazole phosphatase activity
CSC52_2222	COG1278	Cold shock
CSC52_2235	COG0557	exoribonuclease II activity
CSC52_2236	COG1647	Serine aminopeptidase, S33
CSC52_2237	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
CSC52_2250	COG0391	Required for morphogenesis under gluconeogenic growth conditions
CSC52_2262	COG1388	LysM domain
CSC52_2262	COG3942	CHAP domain
CSC52_2266	COG1040	competence protein
CSC52_2267	COG4098	Superfamily II DNA RNA helicase required for DNA uptake (late competence protein)
CSC52_2269	COG1739	Uncharacterized protein family UPF0029
CSC52_2270	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
CSC52_2281	COG4607	ABC-type enterochelin transport system periplasmic component
CSC52_2282	COG4604	ABC transporter, ATP-binding protein
CSC52_2283	COG4605	iron ion homeostasis
CSC52_2284	COG4606	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CSC52_2285	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
CSC52_2286	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
CSC52_2290	COG3104	oligopeptide transport
CSC52_2294	COG1174	glycine betaine transport
CSC52_2295	COG1125	glycine betaine transport
CSC52_2295	COG0517	IMP dehydrogenase activity
CSC52_2296	COG0514	ATP-dependent DNA helicase (RecQ)
CSC52_2297	COG0488	(ABC) transporter
CSC52_2302	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
CSC52_2303	COG0512	Glutamine amidotransferase of anthranilate synthase
CSC52_2303	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
CSC52_2305	COG0720	synthase
CSC52_2312	COG0463	Glycosyl transferase, family 2
CSC52_2313	COG0656	L-ascorbic acid biosynthetic process
CSC52_2314	COG1253	flavin adenine dinucleotide binding
CSC52_2315	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
CSC52_2316	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
CSC52_2316	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
CSC52_2316	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
CSC52_2317	COG1105	Belongs to the carbohydrate kinase PfkB family
CSC52_2318	COG1349	DNA-binding transcription factor activity
CSC52_2319	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
CSC52_2325	COG0471	metal ion transport
CSC52_2327	COG4989	oxidoreductase activity
CSC52_2328	COG0523	cobalamin synthesis protein
CSC52_2329	COG1846	Transcriptional regulator
CSC52_2330	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
CSC52_2331	COG4988	ABC transporter
CSC52_2335	COG1611	Belongs to the LOG family
CSC52_2341	COG2839	Protein conserved in bacteria
CSC52_2342	COG2814	Major facilitator Superfamily
CSC52_2343	COG0583	DNA-binding transcription factor activity
CSC52_2349	COG4977	sequence-specific DNA binding
CSC52_2349	COG1917	Cupin 2, conserved barrel domain protein
CSC52_2351	COG3942	CHAP domain
CSC52_2351	COG1388	LysM domain
CSC52_2352	COG0306	phosphate transporter
CSC52_2353	COG1392	Phosphate transport regulator
CSC52_2354	COG0577	efflux transmembrane transporter activity
CSC52_2355	COG1136	(ABC) transporter
CSC52_2362	COG3949	Membrane
CSC52_2364	COG3412	dihydroxyacetone kinase, phosphotransfer subunit
CSC52_2366	COG2376	Dihydroxyacetone kinase
CSC52_2367	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CSC52_2368	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CSC52_2369	COG1120	ATPase activity
CSC52_2370	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
CSC52_2371	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
CSC52_2372	COG1132	(ABC) transporter
CSC52_2373	COG1686	Belongs to the peptidase S11 family
CSC52_2374	COG0615	ADP-L-glycero-beta-D-manno-heptose biosynthetic process
CSC52_2376	COG1887	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
CSC52_2377	COG1682	transport, permease protein
CSC52_2379	COG1922	lipopolysaccharide N-acetylmannosaminouronosyltransferase activity
CSC52_2381	COG1321	iron dependent repressor
CSC52_2382	COG1121	(ABC) transporter
CSC52_2383	COG1108	ABC-type Mn2 Zn2 transport systems permease components
CSC52_2384	COG0803	Belongs to the bacterial solute-binding protein 9 family
CSC52_2396	COG4974	Belongs to the 'phage' integrase family
CSC52_2407	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
CSC52_2413	COG1078	dGTPase activity
CSC52_2415	COG0655	NAD(P)H dehydrogenase (quinone) activity
CSC52_2416	COG0667	Aldo Keto reductase
CSC52_2421	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
CSC52_2425	COG0083	homoserine kinase activity
CSC52_2426	COG0095	Lipoate-protein ligase
CSC52_2444	COG0269	3-dehydro-L-gulonate-6-phosphate decarboxylase activity
CSC52_2447	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
CSC52_2455	COG0561	phosphatase activity
CSC52_2457	COG1428	Deoxynucleoside kinase
CSC52_2458	COG1428	Deoxynucleoside kinase
CSC52_2459	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
CSC52_2465	COG1473	amidohydrolase
CSC52_2471	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
CSC52_2473	COG2813	Specifically methylates the guanine in position
CSC52_2478	COG0250	Participates in transcription elongation, termination and antitermination
CSC52_2479	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
CSC52_2484	COG1939	Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
CSC52_2488	COG4956	integral membrane protein (PIN domain superfamily)
CSC52_2489	COG1066	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
CSC52_2492	COG3880	PFAM UvrB UvrC protein
CSC52_2494	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
CSC52_2498	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
CSC52_2516	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
CSC52_2521	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
CSC52_2524	COG1098	S1 RNA binding domain
CSC52_2526	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
CSC52_2527	COG3956	TIGRFAM MazG family protein
CSC52_2528	COG2244	polysaccharide biosynthetic process
CSC52_2536	COG0251	oxidation-reduction process
CSC52_2537	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
CSC52_2539	COG4466	Protein conserved in bacteria
CSC52_2541	COG1658	Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
CSC52_2542	COG0084	hydrolase, TatD family'
CSC52_2544	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
CSC52_2546	COG4123	Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)
CSC52_2548	COG1774	PSP1 C-terminal conserved region
CSC52_2549	COG0470	DNA polymerase III
CSC52_2550	COG3870	Protein conserved in bacteria
CSC52_2552	COG1982	Orn Lys Arg decarboxylase major
CSC52_2557	COG0718	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
CSC52_2558	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
CSC52_2560	COG2188	Transcriptional regulator
CSC52_2561	COG0366	Alpha amylase catalytic
CSC52_2562	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
CSC52_2562	COG1263	PTS System
CSC52_2564	COG0493	'glutamate synthase
CSC52_2565	COG0067	glutamate synthase
CSC52_2565	COG0070	glutamate synthase
CSC52_2565	COG0069	glutamate synthase activity
CSC52_2566	COG0583	DNA-binding transcription factor activity
CSC52_2573	COG1464	Belongs to the NlpA lipoprotein family
CSC52_2574	COG2011	ABC-type metal ion transport system permease component
CSC52_2576	COG0626	cystathionine gamma-synthase activity
CSC52_2577	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
CSC52_2578	COG0733	neurotransmitter:sodium symporter activity
CSC52_2579	COG1647	Serine aminopeptidase, S33
CSC52_2582	COG5609	conserved protein (DUF2294)
CSC52_2584	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
CSC52_2585	COG0523	cobalamin synthesis protein
CSC52_2615	COG3759	membrane
CSC52_2622	COG2233	PERMEase
CSC52_2627	COG1823	symporter activity
CSC52_2647	COG0012	GTP binding
CSC52_2648	COG4481	Protein conserved in bacteria
CSC52_2649	COG0668	transmembrane transport
CSC52_2650	COG1475	DNA binding
CSC52_2651	COG0626	cystathionine gamma-synthase activity
CSC52_2652	COG0626	cystathionine gamma-synthase activity
CSC52_2653	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
CSC52_2653	COG0646	methionine synthase
CSC52_2659	COG1131	(ABC) transporter
CSC52_2661	COG1476	TRANSCRIPTIONal
CSC52_2663	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
CSC52_2665	COG0805	protein transport
CSC52_2666	COG0672	)-iron permease
CSC52_2667	COG2837	iron assimilation
CSC52_2668	COG2822	iron ion transport
CSC52_2669	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
CSC52_2672	COG0431	NADPH-dependent FMN reductase
CSC52_2673	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
CSC52_2674	COG0346	lactoylglutathione lyase activity
CSC52_2675	COG2271	Major facilitator Superfamily
CSC52_2680	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
CSC52_2682	COG3037	sugar-specific permease SgaT UlaA
CSC52_2688	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
CSC52_2697	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
CSC52_2698	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
CSC52_2703	COG0577	efflux transmembrane transporter activity
CSC52_2704	COG2503	HAD superfamily, subfamily IIIB (Acid phosphatase)
CSC52_2705	COG1114	Component of the transport system for branched-chain amino acids
CSC52_2729	COG3942	CHAP domain
CSC52_2729	COG1388	LysM domain
CSC52_2743	COG2226	methyltransferase
CSC52_2744	COG2723	6-phospho-beta-galactosidase activity
CSC52_2745	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
CSC52_2745	COG2190	(PTS) system
CSC52_2745	COG1263	PTS System
CSC52_2746	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
CSC52_2753	COG1887	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
CSC52_2754	COG1063	alcohol dehydrogenase
CSC52_2756	COG1887	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
CSC52_2758	COG1887	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
CSC52_2759	COG1063	alcohol dehydrogenase
CSC52_2760	COG1211	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
CSC52_2761	COG1063	alcohol dehydrogenase
CSC52_2763	COG1063	alcohol dehydrogenase
CSC52_2764	COG3775	system Galactitol-specific IIC component
CSC52_2765	COG3414	Phosphotransferase system galactitol-specific IIB component
CSC52_2768	COG1957	nucleoside hydrolase
CSC52_2769	COG2190	(PTS) system
CSC52_2769	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
CSC52_2769	COG1263	PTS System
CSC52_2774	COG3189	MarR family transcriptional regulator
CSC52_2775	COG0747	negative chemotaxis
CSC52_2778	COG0318	PFAM AMP-dependent synthetase and ligase
CSC52_2779	COG1960	acyl-CoA dehydrogenase activity
CSC52_2781	COG0183	Belongs to the thiolase family
CSC52_2792	COG1755	Isoprenylcysteine carboxyl methyltransferase
CSC52_2794	COG0673	inositol 2-dehydrogenase activity
CSC52_2795	COG0673	inositol 2-dehydrogenase activity
CSC52_2796	COG3833	ABC-type maltose transport systems, permease component
CSC52_2797	COG1175	transmembrane transport
CSC52_2799	COG3842	ATPase activity
CSC52_2803	COG0405	Gamma-glutamyltransferase
CSC52_2805	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
CSC52_2812	COG0577	efflux transmembrane transporter activity
CSC52_2812	COG1136	(ABC) transporter
CSC52_2813	COG1136	(ABC) transporter
CSC52_2817	COG1737	Transcriptional regulator
CSC52_2822	COG3961	Belongs to the TPP enzyme family
CSC52_2823	COG1335	isochorismatase
CSC52_2824	COG1114	Component of the transport system for branched-chain amino acids
CSC52_2834	COG5609	conserved protein (DUF2294)
CSC52_2835	COG1960	acyl-CoA dehydrogenase activity
CSC52_2836	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
CSC52_2843	COG2832	Protein of unknown function (DUF454)
CSC52_2845	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
CSC52_2846	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
CSC52_2848	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
CSC52_2854	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
CSC52_2856	COG1086	Polysaccharide biosynthesis protein
CSC52_2861	COG1454	alcohol dehydrogenase
CSC52_2861	COG1012	belongs to the aldehyde dehydrogenase family
CSC52_2864	COG0737	Belongs to the 5'-nucleotidase family
CSC52_2868	COG3639	organic phosphonate transmembrane transporter activity
CSC52_2872	COG2814	Major facilitator Superfamily
CSC52_2873	COG0813	purine-nucleoside phosphorylase activity
CSC52_2879	COG0438	transferase activity, transferring glycosyl groups
CSC52_2880	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
CSC52_2881	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
CSC52_2911	COG0604	alcohol dehydrogenase