locus-tag class description DQU53_00015 PF01022 Bacterial regulatory protein, arsR family DQU53_00025 PF00107 Zinc-binding dehydrogenase DQU53_00025 PF08240 Alcohol dehydrogenase GroES-like domain DQU53_00040 PF08139 Prokaryotic membrane lipoprotein lipid attachment site DQU53_00045 PF05569 BlaR1 peptidase M56 DQU53_00045 PF00905 Penicillin binding protein transpeptidase domain DQU53_00050 PF03965 Penicillinase repressor DQU53_00055 PF02796 Helix-turn-helix domain of resolvase DQU53_00055 PF00239 Resolvase, N terminal domain DQU53_00065 PF13610 DDE domain DQU53_00085 PF01636 Phosphotransferase enzyme family DQU53_00090 PF00583 Acetyltransferase (GNAT) family DQU53_00100 PF13610 DDE domain DQU53_00105 PF02673 Bacitracin resistance protein BacA DQU53_00115 PF00005 ABC transporter DQU53_00120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DQU53_00135 PF13610 DDE domain DQU53_00140 PF00005 ABC transporter DQU53_00145 PF01636 Phosphotransferase enzyme family DQU53_00170 PF00308 Bacterial dnaA protein DQU53_00170 PF08299 Bacterial dnaA protein helix-turn-helix DQU53_00170 PF11638 DnaA N-terminal domain DQU53_00175 PF00712 DNA polymerase III beta subunit, N-terminal domain DQU53_00175 PF02768 DNA polymerase III beta subunit, C-terminal domain DQU53_00175 PF02767 DNA polymerase III beta subunit, central domain DQU53_00185 PF02463 RecF/RecN/SMC N terminal domain DQU53_00190 PF00986 DNA gyrase B subunit, carboxyl terminus DQU53_00190 PF01751 Toprim domain DQU53_00190 PF00204 DNA gyrase B DQU53_00190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DQU53_00195 PF03989 DNA gyrase C-terminal domain, beta-propeller DQU53_00195 PF00521 DNA gyrase/topoisomerase IV, subunit A DQU53_00200 PF01256 Carbohydrate kinase DQU53_00205 PF00221 Aromatic amino acid lyase DQU53_00215 PF02403 Seryl-tRNA synthetase N-terminal domain DQU53_00215 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DQU53_00230 PF00561 alpha/beta hydrolase fold DQU53_00240 PF01368 DHH family DQU53_00240 PF02272 DHHA1 domain DQU53_00245 PF03948 Ribosomal protein L9, C-terminal domain DQU53_00245 PF01281 Ribosomal protein L9, N-terminal domain DQU53_00250 PF00772 DnaB-like helicase N terminal domain DQU53_00250 PF03796 DnaB-like helicase C terminal domain DQU53_00260 PF00709 Adenylosuccinate synthetase DQU53_00275 PF00486 Transcriptional regulatory protein, C terminal DQU53_00275 PF00072 Response regulator receiver domain DQU53_00280 PF13426 PAS domain DQU53_00280 PF00512 His Kinase A (phospho-acceptor) domain DQU53_00280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DQU53_00280 PF00672 HAMP domain DQU53_00285 PF07435 YycH protein DQU53_00295 PF00753 Metallo-beta-lactamase superfamily DQU53_00300 PF02872 5'-nucleotidase, C-terminal domain DQU53_00300 PF00149 Calcineurin-like phosphoesterase DQU53_00305 PF02590 Predicted SPOUT methyltransferase DQU53_00310 PF12008 Type I restriction and modification enzyme - subunit R C terminal DQU53_00310 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) DQU53_00310 PF18766 SWI2/SNF2 ATPase DQU53_00325 PF13302 Acetyltransferase (GNAT) domain DQU53_00360 PF00239 Resolvase, N terminal domain DQU53_00360 PF07508 Recombinase DQU53_00360 PF13408 Recombinase zinc beta ribbon domain DQU53_00385 PF01022 Bacterial regulatory protein, arsR family DQU53_00425 PF00534 Glycosyl transferases group 1 DQU53_00455 PF00476 DNA polymerase family A DQU53_00455 PF01367 5'-3' exonuclease, C-terminal SAM fold DQU53_00455 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain DQU53_00470 PF00239 Resolvase, N terminal domain DQU53_00470 PF02796 Helix-turn-helix domain of resolvase DQU53_00490 PF13610 DDE domain DQU53_00495 PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal DQU53_00495 PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal DQU53_00505 PF03009 Glycerophosphoryl diester phosphodiesterase family DQU53_00510 PF01575 MaoC like domain DQU53_00515 PF05223 NTF2-like N-terminal transpeptidase domain DQU53_00515 PF00905 Penicillin binding protein transpeptidase domain DQU53_00515 PF03717 Penicillin-binding Protein dimerisation domain DQU53_00520 PF00905 Penicillin binding protein transpeptidase domain DQU53_00520 PF05569 BlaR1 peptidase M56 DQU53_00525 PF03965 Penicillinase repressor DQU53_00535 PF00480 ROK family DQU53_00545 PF00753 Metallo-beta-lactamase superfamily DQU53_00545 PF16123 Hydroxyacylglutathione hydrolase C-terminus DQU53_00550 PF13686 DsrE/DsrF/DrsH-like family DQU53_00555 PF02583 Metal-sensitive transcriptional repressor DQU53_00560 PF01925 Sulfite exporter TauE/SafE DQU53_00585 PF00398 Ribosomal RNA adenine dimethylase DQU53_00600 PF00589 Phage integrase family DQU53_00605 PF00589 Phage integrase family DQU53_00605 PF02899 Phage integrase, N-terminal SAM-like domain DQU53_00610 PF04002 RadC-like JAB domain DQU53_00665 PF00072 Response regulator receiver domain DQU53_00665 PF00486 Transcriptional regulatory protein, C terminal DQU53_00670 PF02702 Osmosensitive K+ channel His kinase sensor domain DQU53_00670 PF13493 Domain of unknown function (DUF4118) DQU53_00670 PF00512 His Kinase A (phospho-acceptor) domain DQU53_00670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DQU53_00680 PF03814 Potassium-transporting ATPase A subunit DQU53_00690 PF02669 K+-transporting ATPase, c chain DQU53_00745 PF01925 Sulfite exporter TauE/SafE DQU53_00750 PF02583 Metal-sensitive transcriptional repressor DQU53_00755 PF13686 DsrE/DsrF/DrsH-like family DQU53_00760 PF00753 Metallo-beta-lactamase superfamily DQU53_00780 PF01207 Dihydrouridine synthase (Dus) DQU53_00820 PF04507 Csa1 family DQU53_00825 PF04507 Csa1 family DQU53_00830 PF04507 Csa1 family DQU53_00835 PF04507 Csa1 family DQU53_00840 PF04507 Csa1 family DQU53_00845 PF12833 Helix-turn-helix domain DQU53_00850 PF01546 Peptidase family M20/M25/M40 DQU53_00850 PF07687 Peptidase dimerisation domain DQU53_00855 PF07690 Major Facilitator Superfamily DQU53_00860 PF02690 Na+/Pi-cotransporter DQU53_00865 PF06100 MCRA family DQU53_00870 PF00892 EamA-like transporter family DQU53_00885 PF02652 L-lactate permease DQU53_00890 PF03373 Octapeptide repeat DQU53_00890 PF01476 LysM domain DQU53_00890 PF00746 LPXTG cell wall anchor motif DQU53_00890 PF04650 YSIRK type signal peptide DQU53_00890 PF02216 B domain DQU53_00905 PF01032 FecCD transport family DQU53_00910 PF01032 FecCD transport family DQU53_00915 PF01497 Periplasmic binding protein DQU53_00920 PF00291 Pyridoxal-phosphate dependent enzyme DQU53_00925 PF02423 Ornithine cyclodeaminase/mu-crystallin family DQU53_00930 PF04183 IucA / IucC family DQU53_00930 PF06276 Ferric iron reductase FhuF-like transporter DQU53_00935 PF00083 Sugar (and other) transporter DQU53_00935 PF07690 Major Facilitator Superfamily DQU53_00940 PF06276 Ferric iron reductase FhuF-like transporter DQU53_00940 PF04183 IucA / IucC family DQU53_00945 PF06276 Ferric iron reductase FhuF-like transporter DQU53_00945 PF04183 IucA / IucC family DQU53_00950 PF03328 HpcH/HpaI aldolase/citrate lyase family DQU53_00955 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain DQU53_00955 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain DQU53_00960 PF02195 ParB-like nuclease domain DQU53_00985 PF01370 NAD dependent epimerase/dehydratase family DQU53_00990 PF02397 Bacterial sugar transferase DQU53_00995 PF00534 Glycosyl transferases group 1 DQU53_01010 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain DQU53_01010 PF02777 Iron/manganese superoxide dismutases, C-terminal domain DQU53_01020 PF07702 UTRA domain DQU53_01020 PF00392 Bacterial regulatory proteins, gntR family DQU53_01030 PF01048 Phosphorylase superfamily DQU53_01035 PF07690 Major Facilitator Superfamily DQU53_01040 PF01791 DeoC/LacD family aldolase DQU53_01045 PF01676 Metalloenzyme superfamily DQU53_01050 PF00528 Binding-protein-dependent transport system inner membrane component DQU53_01055 PF00528 Binding-protein-dependent transport system inner membrane component DQU53_01060 PF00005 ABC transporter DQU53_01075 PF02872 5'-nucleotidase, C-terminal domain DQU53_01075 PF00149 Calcineurin-like phosphoesterase DQU53_01090 PF00171 Aldehyde dehydrogenase family DQU53_01090 PF00465 Iron-containing alcohol dehydrogenase DQU53_01095 PF02706 Chain length determinant protein DQU53_01100 PF13614 AAA domain DQU53_01110 PF02719 Polysaccharide biosynthesis protein DQU53_01115 PF08485 Polysaccharide biosynthesis protein C-terminal DQU53_01115 PF02719 Polysaccharide biosynthesis protein DQU53_01120 PF01370 NAD dependent epimerase/dehydratase family DQU53_01125 PF02350 UDP-N-acetylglucosamine 2-epimerase DQU53_01130 PF00132 Bacterial transferase hexapeptide (six repeats) DQU53_01155 PF02397 Bacterial sugar transferase DQU53_01165 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain DQU53_01165 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain DQU53_01165 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain DQU53_01170 PF02350 UDP-N-acetylglucosamine 2-epimerase DQU53_01175 PF03992 Antibiotic biosynthesis monooxygenase DQU53_01180 PF04304 Protein of unknown function (DUF454) DQU53_01185 PF00171 Aldehyde dehydrogenase family DQU53_01190 PF01545 Cation efflux family DQU53_01190 PF16916 Dimerisation domain of Zinc Transporter DQU53_01205 PF00005 ABC transporter DQU53_01215 PF00528 Binding-protein-dependent transport system inner membrane component DQU53_01220 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DQU53_01220 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DQU53_01220 PF02770 Acyl-CoA dehydrogenase, middle domain DQU53_01225 PF10057 Uncharacterized conserved protein (DUF2294) DQU53_01230 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DQU53_01230 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DQU53_01240 PF00501 AMP-binding enzyme DQU53_01240 PF00668 Condensation domain DQU53_01240 PF00975 Thioesterase domain DQU53_01240 PF13193 AMP-binding enzyme C-terminal domain DQU53_01240 PF00550 Phosphopantetheine attachment site DQU53_01255 PF00696 Amino acid kinase family DQU53_01260 PF01960 ArgJ family DQU53_01265 PF02774 Semialdehyde dehydrogenase, dimerisation domain DQU53_01265 PF01118 Semialdehyde dehydrogenase, NAD binding domain DQU53_01270 PF00202 Aminotransferase class-III DQU53_01275 PF05525 Branched-chain amino acid transport protein DQU53_01280 PF00857 Isochorismatase family DQU53_01285 PF00205 Thiamine pyrophosphate enzyme, central domain DQU53_01285 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DQU53_01285 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DQU53_01295 PF02378 Phosphotransferase system, EIIC DQU53_01295 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 DQU53_01295 PF00367 phosphotransferase system, EIIB DQU53_01310 PF02378 Phosphotransferase system, EIIC DQU53_01310 PF00367 phosphotransferase system, EIIB DQU53_01315 PF01380 SIS domain DQU53_01315 PF01418 Helix-turn-helix domain, rpiR family DQU53_01325 PF12008 Type I restriction and modification enzyme - subunit R C terminal DQU53_01325 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) DQU53_01325 PF18766 SWI2/SNF2 ATPase DQU53_01340 PF00005 ABC transporter DQU53_01345 PF00005 ABC transporter DQU53_01345 PF12704 MacB-like periplasmic core domain DQU53_01345 PF02687 FtsX-like permease family DQU53_01365 PF00005 ABC transporter DQU53_01375 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DQU53_01375 PF00005 ABC transporter DQU53_01385 PF00528 Binding-protein-dependent transport system inner membrane component DQU53_01385 PF12911 N-terminal TM domain of oligopeptide transport permease C DQU53_01400 PF04507 Csa1 family DQU53_01405 PF02525 Flavodoxin-like fold DQU53_01410 PF08460 Bacterial SH3 domain DQU53_01410 PF01551 Peptidase family M23 DQU53_01415 PF17912 MalK OB fold domain DQU53_01415 PF00005 ABC transporter DQU53_01415 PF03459 TOBE domain DQU53_01425 PF00528 Binding-protein-dependent transport system inner membrane component DQU53_01430 PF00528 Binding-protein-dependent transport system inner membrane component DQU53_01435 PF02894 Oxidoreductase family, C-terminal alpha/beta domain DQU53_01435 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DQU53_01440 PF02894 Oxidoreductase family, C-terminal alpha/beta domain DQU53_01440 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DQU53_01450 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family DQU53_01455 PF07690 Major Facilitator Superfamily DQU53_01475 PF01228 Glycine radical DQU53_01475 PF02901 Pyruvate formate lyase-like DQU53_01480 PF04055 Radical SAM superfamily DQU53_01495 PF08764 Staphylococcus aureus coagulase DQU53_01495 PF04022 Staphylocoagulase repeat DQU53_01505 PF02803 Thiolase, C-terminal domain DQU53_01505 PF00108 Thiolase, N-terminal domain DQU53_01510 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain DQU53_01510 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DQU53_01515 PF02770 Acyl-CoA dehydrogenase, middle domain DQU53_01515 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DQU53_01515 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DQU53_01520 PF00501 AMP-binding enzyme DQU53_01520 PF13193 AMP-binding enzyme C-terminal domain DQU53_01525 PF01144 Coenzyme A transferase DQU53_01535 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DQU53_01540 PF04343 Protein of unknown function, DUF488 DQU53_01555 PF00175 Oxidoreductase NAD-binding domain DQU53_01555 PF00042 Globin DQU53_01555 PF00970 Oxidoreductase FAD-binding domain DQU53_01565 PF00056 lactate/malate dehydrogenase, NAD binding domain DQU53_01565 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain DQU53_01575 PF00367 phosphotransferase system, EIIB DQU53_01575 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 DQU53_01575 PF02378 Phosphotransferase system, EIIC DQU53_01580 PF01156 Inosine-uridine preferring nucleoside hydrolase DQU53_01600 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DQU53_01605 PF03611 PTS system sugar-specific permease component DQU53_01610 PF00107 Zinc-binding dehydrogenase DQU53_01610 PF08240 Alcohol dehydrogenase GroES-like domain DQU53_01620 PF08240 Alcohol dehydrogenase GroES-like domain DQU53_01620 PF00107 Zinc-binding dehydrogenase DQU53_01625 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase DQU53_01630 PF08240 Alcohol dehydrogenase GroES-like domain DQU53_01630 PF00107 Zinc-binding dehydrogenase DQU53_01635 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase DQU53_01640 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase DQU53_01645 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase DQU53_01650 PF00107 Zinc-binding dehydrogenase DQU53_01650 PF08240 Alcohol dehydrogenase GroES-like domain DQU53_01655 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase DQU53_01660 PF00535 Glycosyl transferase family 2 DQU53_01660 PF18674 TarS beta-glycosyltransferase C-terminal domain 1 DQU53_01665 PF01814 Hemerythrin HHE cation binding domain DQU53_01665 PF04405 Domain of Unknown function (DUF542) DQU53_01670 PF06580 Histidine kinase DQU53_01670 PF07694 5TMR of 5TMR-LYT DQU53_01670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DQU53_01675 PF04397 LytTr DNA-binding domain DQU53_01675 PF00072 Response regulator receiver domain DQU53_01680 PF03788 LrgA family DQU53_01685 PF04172 LrgB-like family DQU53_01690 PF00392 Bacterial regulatory proteins, gntR family DQU53_01690 PF00155 Aminotransferase class I and II DQU53_01700 PF00367 phosphotransferase system, EIIB DQU53_01700 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 DQU53_01700 PF02378 Phosphotransferase system, EIIC DQU53_01705 PF00232 Glycosyl hydrolase family 1 DQU53_01715 PF13649 Methyltransferase domain DQU53_01725 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) DQU53_01725 PF00294 pfkB family carbohydrate kinase DQU53_01730 PF05025 RbsD / FucU transport protein family DQU53_01735 PF06800 Sugar transport protein DQU53_01740 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family DQU53_01740 PF00356 Bacterial regulatory proteins, lacI family DQU53_01755 PF07690 Major Facilitator Superfamily DQU53_01760 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family DQU53_01765 PF01551 Peptidase family M23 DQU53_01770 PF00005 ABC transporter DQU53_01790 PF05257 CHAP domain DQU53_01790 PF01476 LysM domain DQU53_01795 PF06013 Proteins of 100 residues with WXG DQU53_01805 PF10661 WXG100 protein secretion system (Wss), protein EssA DQU53_01810 PF08817 WXG100 protein secretion system (Wss), protein YukD DQU53_01815 PF10140 WXG100 protein secretion system (Wss), protein YukC DQU53_01820 PF01580 FtsK/SpoIIIE family DQU53_01820 PF12538 DNA transporter DQU53_01830 PF06013 Proteins of 100 residues with WXG DQU53_01845 PF14449 Pre-toxin TG DQU53_01910 PF05525 Branched-chain amino acid transport protein DQU53_01920 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) DQU53_01930 PF02687 FtsX-like permease family DQU53_01935 PF00005 ABC transporter DQU53_01955 PF04227 Indigoidine synthase A like protein DQU53_01960 PF07662 Na+ dependent nucleoside transporter C-terminus DQU53_01960 PF01773 Na+ dependent nucleoside transporter N-terminus DQU53_01965 PF00474 Sodium:solute symporter family DQU53_01970 PF00701 Dihydrodipicolinate synthetase family DQU53_01975 PF00480 ROK family DQU53_01980 PF01418 Helix-turn-helix domain, rpiR family DQU53_01980 PF01380 SIS domain DQU53_01985 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase DQU53_01995 PF04650 YSIRK type signal peptide DQU53_02005 PF00724 NADH:flavin oxidoreductase / NADH oxidase family DQU53_02015 PF00296 Luciferase-like monooxygenase DQU53_02020 PF01597 Glycine cleavage H-protein DQU53_02025 PF01661 Macro domain DQU53_02035 PF10437 Bacterial lipoate protein ligase C-terminus DQU53_02035 PF03099 Biotin/lipoate A/B protein ligase family DQU53_02040 PF16363 GDP-mannose 4,6 dehydratase DQU53_02045 PF03611 PTS system sugar-specific permease component DQU53_02055 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DQU53_02060 PF03123 CAT RNA binding domain DQU53_02060 PF00874 PRD domain DQU53_02075 PF01554 MatE DQU53_02085 PF07690 Major Facilitator Superfamily DQU53_02090 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DQU53_02095 PF00296 Luciferase-like monooxygenase DQU53_02100 PF03358 NADPH-dependent FMN reductase DQU53_02105 PF03601 Conserved hypothetical protein 698 DQU53_02115 PF13302 Acetyltransferase (GNAT) domain DQU53_02120 PF09375 Imelysin DQU53_02125 PF04261 Dyp-type peroxidase family DQU53_02130 PF03239 Iron permease FTR1 family DQU53_02135 PF00902 Sec-independent protein translocase protein (TatC) DQU53_02140 PF02416 mttA/Hcf106 family DQU53_02150 PF01381 Helix-turn-helix DQU53_02160 PF00005 ABC transporter DQU53_02175 PF02803 Thiolase, C-terminal domain DQU53_02175 PF00108 Thiolase, N-terminal domain DQU53_02185 PF08267 Cobalamin-independent synthase, N-terminal domain DQU53_02185 PF01717 Cobalamin-independent synthase, Catalytic domain DQU53_02190 PF02574 Homocysteine S-methyltransferase DQU53_02190 PF02219 Methylenetetrahydrofolate reductase DQU53_02195 PF01053 Cys/Met metabolism PLP-dependent enzyme DQU53_02200 PF01053 Cys/Met metabolism PLP-dependent enzyme DQU53_02210 PF17762 HTH domain found in ParB protein DQU53_02210 PF02195 ParB-like nuclease domain DQU53_02215 PF00924 Mechanosensitive ion channel DQU53_02220 PF06107 Bacterial protein of unknown function (DUF951) DQU53_02225 PF06071 Protein of unknown function (DUF933) DQU53_02225 PF01926 50S ribosome-binding GTPase DQU53_02240 PF01250 Ribosomal protein S6 DQU53_02245 PF00436 Single-strand binding protein family DQU53_02250 PF01084 Ribosomal protein S18 DQU53_02315 PF07992 Pyridine nucleotide-disulphide oxidoreductase DQU53_02315 PF13192 Thioredoxin domain DQU53_02320 PF00578 AhpC/TSA family DQU53_02320 PF10417 C-terminal domain of 1-Cys peroxiredoxin DQU53_02325 PF00881 Nitroreductase family DQU53_02330 PF00375 Sodium:dicarboxylate symporter family DQU53_02355 PF11181 Heat induced stress protein YflT DQU53_02365 PF00860 Permease family DQU53_02370 PF00478 IMP dehydrogenase / GMP reductase domain DQU53_02370 PF00571 CBS domain DQU53_02375 PF00117 Glutamine amidotransferase class-I DQU53_02375 PF00958 GMP synthase C terminal domain DQU53_02405 PF06993 Protein of unknown function (DUF1304) DQU53_02415 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain DQU53_02415 PF09199 Staphylococcal superantigen-like OB-fold domain DQU53_02420 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain DQU53_02420 PF09199 Staphylococcal superantigen-like OB-fold domain DQU53_02425 PF09199 Staphylococcal superantigen-like OB-fold domain DQU53_02425 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain DQU53_02435 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain DQU53_02435 PF09199 Staphylococcal superantigen-like OB-fold domain DQU53_02440 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain DQU53_02440 PF09199 Staphylococcal superantigen-like OB-fold domain DQU53_02445 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain DQU53_02445 PF09199 Staphylococcal superantigen-like OB-fold domain DQU53_02450 PF09199 Staphylococcal superantigen-like OB-fold domain DQU53_02450 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain DQU53_02455 PF09199 Staphylococcal superantigen-like OB-fold domain DQU53_02455 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain DQU53_02460 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain DQU53_02460 PF09199 Staphylococcal superantigen-like OB-fold domain DQU53_02470 PF02384 N-6 DNA Methylase DQU53_02470 PF12161 HsdM N-terminal domain DQU53_02480 PF09199 Staphylococcal superantigen-like OB-fold domain DQU53_02480 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain DQU53_02495 PF04507 Csa1 family DQU53_02500 PF04507 Csa1 family DQU53_02505 PF04507 Csa1 family DQU53_02510 PF04507 Csa1 family DQU53_02515 PF04507 Csa1 family DQU53_02520 PF04507 Csa1 family DQU53_02525 PF04507 Csa1 family DQU53_02530 PF04507 Csa1 family DQU53_02535 PF04507 Csa1 family DQU53_02540 PF04507 Csa1 family DQU53_02565 PF07683 Cobalamin synthesis protein cobW C-terminal domain DQU53_02565 PF02492 CobW/HypB/UreG, nucleotide-binding domain DQU53_02570 PF17063 Phenol-soluble modulin alpha 4 peptide DQU53_02590 PF00361 Proton-conducting membrane transporter DQU53_02590 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus DQU53_02595 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) DQU53_02600 PF10057 Uncharacterized conserved protein (DUF2294) DQU53_02615 PF12146 Serine aminopeptidase, S33 DQU53_02620 PF00209 Sodium:neurotransmitter symporter family DQU53_02625 PF00291 Pyridoxal-phosphate dependent enzyme DQU53_02630 PF01053 Cys/Met metabolism PLP-dependent enzyme DQU53_02635 PF00005 ABC transporter DQU53_02635 PF09383 NIL domain DQU53_02640 PF00528 Binding-protein-dependent transport system inner membrane component DQU53_02645 PF03180 NLPA lipoprotein DQU53_02650 PF01476 LysM domain DQU53_02650 PF05257 CHAP domain DQU53_02680 PF03466 LysR substrate binding domain DQU53_02680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DQU53_02685 PF01645 Conserved region in glutamate synthase DQU53_02685 PF04898 Glutamate synthase central domain DQU53_02685 PF00310 Glutamine amidotransferases class-II DQU53_02685 PF01493 GXGXG motif DQU53_02690 PF07992 Pyridine nucleotide-disulphide oxidoreductase DQU53_02690 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster DQU53_02700 PF02378 Phosphotransferase system, EIIC DQU53_02700 PF00367 phosphotransferase system, EIIB DQU53_02705 PF00128 Alpha amylase, catalytic domain DQU53_02705 PF16657 Maltogenic Amylase, C-terminal domain DQU53_02710 PF00392 Bacterial regulatory proteins, gntR family DQU53_02710 PF07702 UTRA domain DQU53_02730 PF12169 DNA polymerase III subunits gamma and tau domain III DQU53_02735 PF02575 YbaB/EbfC DNA-binding family DQU53_02740 PF02132 RecR protein DQU53_02740 PF13662 Toprim domain DQU53_02770 PF01276 Orn/Lys/Arg decarboxylase, major domain DQU53_02770 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain DQU53_02775 PF02223 Thymidylate kinase DQU53_02780 PF06153 Cyclic-di-AMP receptor DQU53_02785 PF09115 DNA polymerase III, delta subunit, C terminal DQU53_02790 PF04468 PSP1 C-terminal conserved region DQU53_02795 PF06156 Initiation control protein YabA DQU53_02800 PF05175 Methyltransferase small domain DQU53_02805 PF01541 GIY-YIG catalytic domain DQU53_02810 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DQU53_02815 PF08264 Anticodon-binding domain of tRNA DQU53_02815 PF01588 Putative tRNA binding domain DQU53_02815 PF09334 tRNA synthetases class I (M) DQU53_02820 PF01026 TatD related DNase DQU53_02825 PF13331 Domain of unknown function (DUF4093) DQU53_02825 PF01751 Toprim domain DQU53_02830 PF00398 Ribosomal RNA adenine dimethylase DQU53_02835 PF06257 Biofilm formation stimulator VEG DQU53_02840 PF08544 GHMP kinases C terminal DQU53_02840 PF00288 GHMP kinases N terminal domain DQU53_02845 PF00156 Phosphoribosyl transferase domain DQU53_02845 PF09182 Bacterial purine repressor, N-terminal DQU53_02850 PF01042 Endoribonuclease L-PSP DQU53_02855 PF04026 SpoVG DQU53_02865 PF00483 Nucleotidyl transferase DQU53_02865 PF00132 Bacterial transferase hexapeptide (six repeats) DQU53_02870 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase DQU53_02870 PF14572 Phosphoribosyl synthetase-associated domain DQU53_02880 PF14693 Ribosomal protein TL5, C-terminal domain DQU53_02880 PF01386 Ribosomal L25p family DQU53_02885 PF01195 Peptidyl-tRNA hydrolase DQU53_02890 PF17757 UvrB interaction domain DQU53_02890 PF00271 Helicase conserved C-terminal domain DQU53_02890 PF00270 DEAD/DEAH box helicase DQU53_02890 PF03461 TRCF domain DQU53_02890 PF02559 CarD-like/TRCF domain DQU53_02895 PF14667 Polysaccharide biosynthesis C-terminal domain DQU53_02895 PF01943 Polysaccharide biosynthesis protein DQU53_02900 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DQU53_02900 PF03819 MazG nucleotide pyrophosphohydrolase domain DQU53_02905 PF01479 S4 domain DQU53_02915 PF00575 S1 RNA binding domain DQU53_02920 PF01171 PP-loop family DQU53_02920 PF11734 TilS substrate C-terminal domain DQU53_02930 PF17862 AAA+ lid domain DQU53_02930 PF06480 FtsH Extracellular DQU53_02930 PF00004 ATPase family associated with various cellular activities (AAA) DQU53_02930 PF01434 Peptidase family M41 DQU53_02935 PF01430 Hsp33 protein DQU53_02940 PF00291 Pyridoxal-phosphate dependent enzyme DQU53_02945 PF00809 Pterin binding enzyme DQU53_02950 PF02152 Dihydroneopterin aldolase DQU53_02955 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) DQU53_02965 PF00152 tRNA synthetases class II (D, K and N) DQU53_02965 PF01336 OB-fold nucleic acid binding domain DQU53_03045 PF00155 Aminotransferase class I and II DQU53_03045 PF00392 Bacterial regulatory proteins, gntR family DQU53_03050 PF01680 SOR/SNZ family DQU53_03055 PF01174 SNO glutamine amidotransferase family DQU53_03060 PF01773 Na+ dependent nucleoside transporter N-terminus DQU53_03060 PF07662 Na+ dependent nucleoside transporter C-terminus DQU53_03065 PF17727 CtsR C-terminal dimerization domain DQU53_03065 PF05848 CtsR N-terminal HTH domain DQU53_03070 PF02151 UvrB/uvrC motif DQU53_03075 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain DQU53_03080 PF07724 AAA domain (Cdc48 subfamily) DQU53_03080 PF10431 C-terminal, D2-small domain, of ClpB protein DQU53_03080 PF02861 Clp amino terminal domain, pathogenicity island component DQU53_03080 PF17871 AAA lid domain DQU53_03080 PF00004 ATPase family associated with various cellular activities (AAA) DQU53_03085 PF18073 Rubredoxin metal binding domain DQU53_03095 PF00749 tRNA synthetases class I (E and Q), catalytic domain DQU53_03105 PF00132 Bacterial transferase hexapeptide (six repeats) DQU53_03110 PF09190 DALR domain DQU53_03110 PF01406 tRNA synthetases class I (C) catalytic domain DQU53_03115 PF00636 Ribonuclease III domain DQU53_03120 PF00588 SpoU rRNA Methylase family DQU53_03120 PF08032 RNA 2'-O ribose methyltransferase substrate binding DQU53_03135 PF00471 Ribosomal protein L33 DQU53_03140 PF00584 SecE/Sec61-gamma subunits of protein translocation complex DQU53_03145 PF02357 Transcription termination factor nusG DQU53_03145 PF00467 KOW motif DQU53_03150 PF03946 Ribosomal protein L11, N-terminal domain DQU53_03150 PF00298 Ribosomal protein L11, RNA binding domain DQU53_03155 PF00687 Ribosomal protein L1p/L10e family DQU53_03165 PF00466 Ribosomal protein L10 DQU53_03170 PF00542 Ribosomal protein L7/L12 C-terminal domain DQU53_03170 PF16320 Ribosomal protein L7/L12 dimerisation domain DQU53_03175 PF05175 Methyltransferase small domain DQU53_03180 PF04561 RNA polymerase Rpb2, domain 2 DQU53_03180 PF04563 RNA polymerase beta subunit DQU53_03180 PF04560 RNA polymerase Rpb2, domain 7 DQU53_03180 PF04565 RNA polymerase Rpb2, domain 3 DQU53_03180 PF00562 RNA polymerase Rpb2, domain 6 DQU53_03180 PF10385 RNA polymerase beta subunit external 1 domain DQU53_03185 PF04983 RNA polymerase Rpb1, domain 3 DQU53_03185 PF05000 RNA polymerase Rpb1, domain 4 DQU53_03185 PF04997 RNA polymerase Rpb1, domain 1 DQU53_03185 PF04998 RNA polymerase Rpb1, domain 5 DQU53_03185 PF00623 RNA polymerase Rpb1, domain 2 DQU53_03190 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family DQU53_03195 PF00164 Ribosomal protein S12/S23 DQU53_03200 PF00177 Ribosomal protein S7p/S5e DQU53_03205 PF14492 Elongation Factor G, domain II DQU53_03205 PF00679 Elongation factor G C-terminus DQU53_03205 PF03764 Elongation factor G, domain IV DQU53_03205 PF00009 Elongation factor Tu GTP binding domain DQU53_03205 PF03144 Elongation factor Tu domain 2 DQU53_03210 PF03143 Elongation factor Tu C-terminal domain DQU53_03210 PF03144 Elongation factor Tu domain 2 DQU53_03210 PF00009 Elongation factor Tu GTP binding domain DQU53_03215 PF01546 Peptidase family M20/M25/M40 DQU53_03215 PF07687 Peptidase dimerisation domain DQU53_03220 PF00155 Aminotransferase class I and II DQU53_03225 PF01965 DJ-1/PfpI family DQU53_03230 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DQU53_03230 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DQU53_03235 PF01370 NAD dependent epimerase/dehydratase family DQU53_03240 PF01063 Amino-transferase class IV DQU53_03250 PF01712 Deoxynucleoside kinase DQU53_03255 PF01712 Deoxynucleoside kinase DQU53_03260 PF14437 MafB19-like deaminase DQU53_03270 PF03358 NADPH-dependent FMN reductase DQU53_03280 PF17961 Bacterial Ig domain DQU53_03280 PF04650 YSIRK type signal peptide DQU53_03280 PF17210 SdrD B-like domain DQU53_03280 PF00746 LPXTG cell wall anchor motif DQU53_03280 PF10425 C-terminus of bacterial fibrinogen-binding adhesin DQU53_03285 PF10425 C-terminus of bacterial fibrinogen-binding adhesin DQU53_03285 PF04650 YSIRK type signal peptide DQU53_03285 PF17961 Bacterial Ig domain DQU53_03285 PF17210 SdrD B-like domain DQU53_03285 PF00746 LPXTG cell wall anchor motif DQU53_03290 PF00746 LPXTG cell wall anchor motif DQU53_03290 PF04650 YSIRK type signal peptide DQU53_03290 PF17961 Bacterial Ig domain DQU53_03290 PF17210 SdrD B-like domain DQU53_03290 PF10425 C-terminus of bacterial fibrinogen-binding adhesin DQU53_03295 PF00534 Glycosyl transferases group 1 DQU53_03305 PF02649 Type I GTP cyclohydrolase folE2 DQU53_03310 PF02585 GlcNAc-PI de-N-acetylase DQU53_03320 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase DQU53_03325 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family DQU53_03330 PF01380 SIS domain DQU53_03340 PF07690 Major Facilitator Superfamily DQU53_03350 PF00501 AMP-binding enzyme DQU53_03350 PF13193 AMP-binding enzyme C-terminal domain DQU53_03355 PF00108 Thiolase, N-terminal domain DQU53_03355 PF02803 Thiolase, C-terminal domain DQU53_03370 PF17412 Family of unknown function DQU53_03375 PF08543 Phosphomethylpyrimidine kinase DQU53_03380 PF03167 Uracil DNA glycosylase superfamily DQU53_03390 PF04241 Protein of unknown function (DUF423) DQU53_03420 PF01515 Phosphate acetyl/butaryl transferase DQU53_03425 PF03099 Biotin/lipoate A/B protein ligase family DQU53_03430 PF08544 GHMP kinases C terminal DQU53_03430 PF00288 GHMP kinases N terminal domain DQU53_03440 PF00288 GHMP kinases N terminal domain DQU53_03440 PF08544 GHMP kinases C terminal DQU53_03445 PF07293 Protein of unknown function (DUF1450) DQU53_03450 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DQU53_03450 PF07992 Pyridine nucleotide-disulphide oxidoreductase DQU53_03485 PF00248 Aldo/keto reductase family DQU53_03495 PF03358 NADPH-dependent FMN reductase DQU53_03505 PF01966 HD domain DQU53_03510 PF08741 YwhD family DQU53_03515 PF08240 Alcohol dehydrogenase GroES-like domain DQU53_03515 PF00107 Zinc-binding dehydrogenase DQU53_03530 PF00750 tRNA synthetases class I (R) DQU53_03530 PF03485 Arginyl tRNA synthetase N terminal domain DQU53_03530 PF05746 DALR anticodon binding domain DQU53_03540 PF01497 Periplasmic binding protein DQU53_03545 PF01032 FecCD transport family DQU53_03550 PF13419 Haloacid dehalogenase-like hydrolase DQU53_03555 PF00561 alpha/beta hydrolase fold DQU53_03595 PF00589 Phage integrase family DQU53_03600 PF13244 Domain of unknown function (DUF4040) DQU53_03600 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus DQU53_03600 PF00361 Proton-conducting membrane transporter DQU53_03605 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter DQU53_03610 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L DQU53_03615 PF00361 Proton-conducting membrane transporter DQU53_03620 PF01899 Na+/H+ ion antiporter subunit DQU53_03625 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) DQU53_03630 PF03334 Na+/H+ antiporter subunit DQU53_03635 PF00999 Sodium/hydrogen exchanger family DQU53_03650 PF01297 Zinc-uptake complex component A periplasmic DQU53_03655 PF00950 ABC 3 transport family DQU53_03660 PF00005 ABC transporter DQU53_03665 PF02742 Iron dependent repressor, metal binding and dimerisation domain DQU53_03665 PF01325 Iron dependent repressor, N-terminal DNA binding domain DQU53_03665 PF18357 Diphteria toxin repressor SH3 domain DQU53_03675 PF03808 Glycosyl transferase WecB/TagA/CpsF family DQU53_03680 PF00005 ABC transporter DQU53_03685 PF01061 ABC-2 type transporter DQU53_03690 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase DQU53_03695 PF00535 Glycosyl transferase family 2 DQU53_03700 PF01467 Cytidylyltransferase-like DQU53_03705 PF00768 D-alanyl-D-alanine carboxypeptidase DQU53_03705 PF07943 Penicillin-binding protein 5, C-terminal domain DQU53_03710 PF00005 ABC transporter DQU53_03710 PF00664 ABC transporter transmembrane region DQU53_03715 PF01773 Na+ dependent nucleoside transporter N-terminus DQU53_03715 PF07662 Na+ dependent nucleoside transporter C-terminus DQU53_03725 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) DQU53_03725 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 DQU53_03730 PF00005 ABC transporter DQU53_03735 PF01032 FecCD transport family DQU53_03740 PF01032 FecCD transport family DQU53_03745 PF02733 Dak1 domain DQU53_03750 PF02734 DAK2 domain DQU53_03755 PF03610 PTS system fructose IIA component DQU53_03795 PF00486 Transcriptional regulatory protein, C terminal DQU53_03795 PF00072 Response regulator receiver domain DQU53_03800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DQU53_03805 PF00005 ABC transporter DQU53_03810 PF02687 FtsX-like permease family DQU53_03820 PF01865 Protein of unknown function DUF47 DQU53_03825 PF01384 Phosphate transporter family DQU53_03830 PF01476 LysM domain DQU53_03830 PF05257 CHAP domain DQU53_03840 PF12833 Helix-turn-helix domain DQU53_03840 PF02311 AraC-like ligand binding domain DQU53_03850 PF01709 Transcriptional regulator DQU53_03870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DQU53_03870 PF03466 LysR substrate binding domain DQU53_03875 PF07690 Major Facilitator Superfamily DQU53_03880 PF04306 Protein of unknown function (DUF456) DQU53_03905 PF13302 Acetyltransferase (GNAT) domain DQU53_03910 PF03641 Possible lysine decarboxylase DQU53_03915 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 DQU53_03925 PF02673 Bacitracin resistance protein BacA DQU53_03930 PF00005 ABC transporter DQU53_03930 PF00664 ABC transporter transmembrane region DQU53_03935 PF00005 ABC transporter DQU53_03935 PF00664 ABC transporter transmembrane region DQU53_03940 PF01047 MarR family DQU53_03945 PF07683 Cobalamin synthesis protein cobW C-terminal domain DQU53_03945 PF02492 CobW/HypB/UreG, nucleotide-binding domain DQU53_03950 PF00248 Aldo/keto reductase family DQU53_03960 PF00939 Sodium:sulfate symporter transmembrane region DQU53_03985 PF07690 Major Facilitator Superfamily DQU53_03995 PF04073 Aminoacyl-tRNA editing domain DQU53_04000 PF00455 DeoR C terminal sensor domain DQU53_04000 PF08220 DeoR-like helix-turn-helix domain DQU53_04005 PF00294 pfkB family carbohydrate kinase DQU53_04010 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DQU53_04010 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DQU53_04015 PF01979 Amidohydrolase family DQU53_04020 PF03471 Transporter associated domain DQU53_04020 PF00571 CBS domain DQU53_04020 PF01595 Cyclin M transmembrane N-terminal domain DQU53_04025 PF00248 Aldo/keto reductase family DQU53_04030 PF00535 Glycosyl transferase family 2 DQU53_04035 PF00512 His Kinase A (phospho-acceptor) domain DQU53_04035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DQU53_04040 PF00486 Transcriptional regulatory protein, C terminal DQU53_04040 PF00072 Response regulator receiver domain DQU53_04060 PF04055 Radical SAM superfamily DQU53_04065 PF01242 6-pyruvoyl tetrahydropterin synthase DQU53_04070 PF06508 Queuosine biosynthesis protein QueC DQU53_04075 PF02885 Glycosyl transferase family, helical bundle domain DQU53_04075 PF00117 Glutamine amidotransferase class-I DQU53_04075 PF00591 Glycosyl transferase family, a/b domain DQU53_04080 PF00425 chorismate binding enzyme DQU53_04080 PF04715 Anthranilate synthase component I, N terminal region DQU53_04105 PF00884 Sulfatase DQU53_04110 PF00005 ABC transporter DQU53_04110 PF12848 ABC transporter DQU53_04110 PF16326 ABC transporter C-terminal domain DQU53_04115 PF09382 RQC domain DQU53_04115 PF00270 DEAD/DEAH box helicase DQU53_04115 PF00271 Helicase conserved C-terminal domain DQU53_04115 PF00570 HRDC domain DQU53_04115 PF16124 RecQ zinc-binding DQU53_04120 PF00005 ABC transporter DQU53_04120 PF00571 CBS domain DQU53_04125 PF00528 Binding-protein-dependent transport system inner membrane component DQU53_04130 PF00155 Aminotransferase class I and II DQU53_04135 PF06941 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) DQU53_04150 PF00781 Diacylglycerol kinase catalytic domain DQU53_04160 PF00854 POT family DQU53_04170 PF14489 QueF-like protein DQU53_04185 PF07972 NrdI Flavodoxin like DQU53_04190 PF08343 Ribonucleotide reductase N-terminal DQU53_04190 PF02867 Ribonucleotide reductase, barrel domain DQU53_04190 PF00317 Ribonucleotide reductase, all-alpha domain DQU53_04195 PF00268 Ribonucleotide reductase, small chain DQU53_04205 PF01032 FecCD transport family DQU53_04210 PF01032 FecCD transport family DQU53_04215 PF00005 ABC transporter DQU53_04220 PF01497 Periplasmic binding protein DQU53_04230 PF01565 FAD binding domain DQU53_04230 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain DQU53_04250 PF02595 Glycerate kinase family DQU53_04255 PF07687 Peptidase dimerisation domain DQU53_04255 PF01546 Peptidase family M20/M25/M40 DQU53_04270 PF00990 Diguanylate cyclase, GGDEF domain DQU53_04270 PF07694 5TMR of 5TMR-LYT DQU53_04275 PF00953 Glycosyl transferase family 4 DQU53_04280 PF01205 Uncharacterized protein family UPF0029 DQU53_04280 PF09186 Domain of unknown function (DUF1949) DQU53_04285 PF02645 Uncharacterised protein, DegV family COG1307 DQU53_04290 PF04851 Type III restriction enzyme, res subunit DQU53_04290 PF00271 Helicase conserved C-terminal domain DQU53_04300 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus DQU53_04300 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein DQU53_04305 PF07517 SecA DEAD-like domain DQU53_04305 PF02810 SEC-C motif DQU53_04305 PF01043 SecA preprotein cross-linking domain DQU53_04305 PF07516 SecA Wing and Scaffold domain DQU53_04325 PF01476 LysM domain DQU53_04325 PF05257 CHAP domain DQU53_04340 PF17757 UvrB interaction domain DQU53_04340 PF12344 Ultra-violet resistance protein B DQU53_04340 PF00271 Helicase conserved C-terminal domain DQU53_04340 PF04851 Type III restriction enzyme, res subunit DQU53_04340 PF02151 UvrB/uvrC motif DQU53_04345 PF17755 UvrA DNA-binding domain DQU53_04345 PF17760 UvrA interaction domain DQU53_04345 PF00005 ABC transporter DQU53_04350 PF02603 HPr Serine kinase N terminus DQU53_04350 PF07475 HPr Serine kinase C-terminal domain DQU53_04355 PF01790 Prolipoprotein diacylglyceryl transferase DQU53_04360 PF14602 Hexapeptide repeat of succinyl-transferase DQU53_04370 PF07992 Pyridine nucleotide-disulphide oxidoreductase DQU53_04380 PF03668 P-loop ATPase protein family DQU53_04385 PF01933 Uncharacterised protein family UPF0052 DQU53_04390 PF02650 WhiA C-terminal HTH domain DQU53_04390 PF10298 WhiA N-terminal LAGLIDADG-like domain DQU53_04390 PF14527 WhiA LAGLIDADG-like domain DQU53_04400 PF00574 Clp protease DQU53_04405 PF01370 NAD dependent epimerase/dehydratase family DQU53_04405 PF08338 Domain of unknown function (DUF1731) DQU53_04425 PF04198 Putative sugar-binding domain DQU53_04430 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain DQU53_04430 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain DQU53_04435 PF00162 Phosphoglycerate kinase DQU53_04440 PF00121 Triosephosphate isomerase DQU53_04445 PF01676 Metalloenzyme superfamily DQU53_04445 PF06415 BPG-independent PGAM N-terminus (iPGM_N) DQU53_04450 PF00113 Enolase, C-terminal TIM barrel domain DQU53_04450 PF03952 Enolase, N-terminal domain DQU53_04460 PF03840 Preprotein translocase SecG subunit DQU53_04465 PF12146 Serine aminopeptidase, S33 DQU53_04470 PF08206 Ribonuclease B OB domain DQU53_04470 PF00575 S1 RNA binding domain DQU53_04470 PF00773 RNB domain DQU53_04470 PF17876 Cold shock domain DQU53_04475 PF01668 SmpB protein DQU53_04520 PF10425 C-terminus of bacterial fibrinogen-binding adhesin DQU53_04520 PF00746 LPXTG cell wall anchor motif DQU53_04520 PF17961 Bacterial Ig domain DQU53_04520 PF04650 YSIRK type signal peptide DQU53_04520 PF10425 C-terminus of bacterial fibrinogen-binding adhesin DQU53_04520 PF00746 LPXTG cell wall anchor motif DQU53_04520 PF17961 Bacterial Ig domain DQU53_04520 PF04650 YSIRK type signal peptide DQU53_04540 PF00565 Staphylococcal nuclease homologue DQU53_04545 PF00313 'Cold-shock' DNA-binding domain DQU53_04585 PF00300 Histidine phosphatase superfamily (branch 1) DQU53_04590 PF01810 LysE type translocator DQU53_04600 PF02566 OsmC-like protein DQU53_04605 PF01487 Type I 3-dehydroquinase DQU53_04615 PF00085 Thioredoxin DQU53_04620 PF03960 ArsC family DQU53_04625 PF01597 Glycine cleavage H-protein DQU53_04635 PF09234 Domain of unknown function (DUF1963) DQU53_04645 PF01751 Toprim domain DQU53_04655 PF00005 ABC transporter DQU53_04655 PF09383 NIL domain DQU53_04660 PF00528 Binding-protein-dependent transport system inner membrane component DQU53_04665 PF03180 NLPA lipoprotein DQU53_04670 PF05532 CsbD-like DQU53_04680 PF00005 ABC transporter DQU53_04685 PF01458 Uncharacterized protein family (UPF0051) DQU53_04690 PF00266 Aminotransferase class-V DQU53_04695 PF01592 NifU-like N terminal domain DQU53_04700 PF01458 Uncharacterized protein family (UPF0051) DQU53_04730 PF01381 Helix-turn-helix DQU53_04785 PF00436 Single-strand binding protein family DQU53_04805 PF01695 IstB-like ATP binding protein DQU53_04860 PF00692 dUTPase DQU53_05015 PF13457 GW (Gly-Tryp) dipeptide domain DQU53_05015 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase DQU53_05030 PF04688 SPP1 phage holin DQU53_05035 PF08460 Bacterial SH3 domain DQU53_05035 PF05257 CHAP domain DQU53_05035 PF01520 N-acetylmuramoyl-L-alanine amidase DQU53_05075 PF01595 Cyclin M transmembrane N-terminal domain DQU53_05075 PF03471 Transporter associated domain DQU53_05075 PF00571 CBS domain DQU53_05080 PF03060 Nitronate monooxygenase DQU53_05090 PF01904 Protein of unknown function DUF72 DQU53_05095 PF01925 Sulfite exporter TauE/SafE DQU53_05105 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family DQU53_05105 PF04055 Radical SAM superfamily DQU53_05110 PF06265 Protein of unknown function (DUF1027) DQU53_05130 PF01934 Protein of unknown function DUF86 DQU53_05135 PF13344 Haloacid dehalogenase-like hydrolase DQU53_05140 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DQU53_05140 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DQU53_05155 PF13193 AMP-binding enzyme C-terminal domain DQU53_05155 PF00501 AMP-binding enzyme DQU53_05160 PF03062 MBOAT, membrane-bound O-acyltransferase family DQU53_05165 PF00550 Phosphopantetheine attachment site DQU53_05170 PF04914 DltD protein DQU53_05175 PF01106 NifU-like domain DQU53_05180 PF07315 Protein of unknown function (DUF1462) DQU53_05185 PF07992 Pyridine nucleotide-disulphide oxidoreductase DQU53_05190 PF07293 Protein of unknown function (DUF1450) DQU53_05195 PF01521 Iron-sulphur cluster biosynthesis DQU53_05200 PF07992 Pyridine nucleotide-disulphide oxidoreductase DQU53_05205 PF00883 Cytosol aminopeptidase family, catalytic domain DQU53_05205 PF02789 Cytosol aminopeptidase family, N-terminal domain DQU53_05210 PF03553 Na+/H+ antiporter family DQU53_05210 PF13726 Na+-H+ antiporter family DQU53_05215 PF03061 Thioesterase superfamily DQU53_05225 PF03334 Na+/H+ antiporter subunit DQU53_05230 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) DQU53_05235 PF01899 Na+/H+ ion antiporter subunit DQU53_05240 PF00361 Proton-conducting membrane transporter DQU53_05245 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L DQU53_05250 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter DQU53_05255 PF13244 Domain of unknown function (DUF4040) DQU53_05255 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus DQU53_05255 PF00361 Proton-conducting membrane transporter DQU53_05265 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD DQU53_05270 PF00575 S1 RNA binding domain DQU53_05275 PF00724 NADH:flavin oxidoreductase / NADH oxidase family DQU53_05280 PF00202 Aminotransferase class-III DQU53_05285 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain DQU53_05285 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase DQU53_05290 PF03009 Glycerophosphoryl diester phosphodiesterase family DQU53_05295 PF00206 Lyase DQU53_05295 PF14698 Argininosuccinate lyase C-terminal DQU53_05300 PF00764 Arginosuccinate synthase DQU53_05305 PF00342 Phosphoglucose isomerase DQU53_05310 PF09335 SNARE associated Golgi protein DQU53_05315 PF10502 Signal peptidase, peptidase S26 DQU53_05320 PF10502 Signal peptidase, peptidase S26 DQU53_05325 PF13361 UvrD-like helicase C-terminal domain DQU53_05325 PF12705 PD-(D/E)XK nuclease superfamily DQU53_05330 PF12705 PD-(D/E)XK nuclease superfamily DQU53_05330 PF13361 UvrD-like helicase C-terminal domain DQU53_05330 PF00580 UvrD/REP helicase N-terminal domain DQU53_05335 PF01557 Fumarylacetoacetate (FAA) hydrolase family DQU53_05340 PF07457 Protein of unknown function (DUF1516) DQU53_05345 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DQU53_05345 PF07992 Pyridine nucleotide-disulphide oxidoreductase DQU53_05355 PF01883 Iron-sulfur cluster assembly protein DQU53_05360 PF01757 Acyltransferase family DQU53_05365 PF07724 AAA domain (Cdc48 subfamily) DQU53_05365 PF00004 ATPase family associated with various cellular activities (AAA) DQU53_05365 PF10431 C-terminal, D2-small domain, of ClpB protein DQU53_05365 PF02861 Clp amino terminal domain, pathogenicity island component DQU53_05365 PF17871 AAA lid domain DQU53_05390 PF01161 Phosphatidylethanolamine-binding protein DQU53_05395 PF03642 MAP domain DQU53_05405 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III DQU53_05405 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal DQU53_05410 PF02801 Beta-ketoacyl synthase, C-terminal domain DQU53_05410 PF00109 Beta-ketoacyl synthase, N-terminal domain DQU53_05420 PF00528 Binding-protein-dependent transport system inner membrane component DQU53_05425 PF00528 Binding-protein-dependent transport system inner membrane component DQU53_05425 PF12911 N-terminal TM domain of oligopeptide transport permease C DQU53_05430 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DQU53_05430 PF00005 ABC transporter DQU53_05435 PF00005 ABC transporter DQU53_05435 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DQU53_05440 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DQU53_05445 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DQU53_05450 PF00005 ABC transporter DQU53_05450 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DQU53_05455 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DQU53_05455 PF00005 ABC transporter DQU53_05460 PF00528 Binding-protein-dependent transport system inner membrane component DQU53_05465 PF00528 Binding-protein-dependent transport system inner membrane component DQU53_05465 PF12911 N-terminal TM domain of oligopeptide transport permease C DQU53_05470 PF00579 tRNA synthetases class I (W and Y) DQU53_05475 PF03960 ArsC family DQU53_05480 PF05389 Negative regulator of genetic competence (MecA) DQU53_05490 PF01432 Peptidase family M3 DQU53_05490 PF08439 Oligopeptidase F DQU53_05500 PF01152 Bacterial-like globin DQU53_05515 PF04607 Region found in RelA / SpoT proteins DQU53_05520 PF01513 ATP-NAD kinase DQU53_05525 PF00849 RNA pseudouridylate synthase DQU53_05530 PF01769 Divalent cation transporter DQU53_05530 PF00571 CBS domain DQU53_05530 PF03448 MgtE intracellular N domain DQU53_05535 PF00999 Sodium/hydrogen exchanger family DQU53_05535 PF02080 TrkA-C domain DQU53_05535 PF02254 TrkA-N domain DQU53_05545 PF01594 AI-2E family transporter DQU53_05550 PF01235 Sodium:alanine symporter family DQU53_05565 PF07690 Major Facilitator Superfamily DQU53_05570 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase DQU53_05570 PF04101 Glycosyltransferase family 28 C-terminal domain DQU53_05575 PF08245 Mur ligase middle domain DQU53_05575 PF01225 Mur ligase family, catalytic domain DQU53_05575 PF02875 Mur ligase family, glutamate ligase domain DQU53_05585 PF16658 Class II release factor RF3, C-terminal domain DQU53_05585 PF00009 Elongation factor Tu GTP binding domain DQU53_05585 PF03144 Elongation factor Tu domain 2 DQU53_05590 PF03741 Integral membrane protein TerC family DQU53_05595 PF13180 PDZ domain DQU53_05600 PF02386 Cation transport protein DQU53_05605 PF02872 5'-nucleotidase, C-terminal domain DQU53_05605 PF00149 Calcineurin-like phosphoesterase DQU53_05620 PF06338 ComK protein DQU53_05630 PF03099 Biotin/lipoate A/B protein ligase family DQU53_05630 PF10437 Bacterial lipoate protein ligase C-terminus DQU53_05635 PF09953 Uncharacterized protein conserved in bacteria (DUF2187) DQU53_05670 PF00005 ABC transporter DQU53_05670 PF12704 MacB-like periplasmic core domain DQU53_05670 PF02687 FtsX-like permease family DQU53_05680 PF00534 Glycosyl transferases group 1 DQU53_05690 PF01497 Periplasmic binding protein DQU53_05700 PF05154 TM2 domain DQU53_05705 PF00583 Acetyltransferase (GNAT) family DQU53_05710 PF01040 UbiA prenyltransferase family DQU53_05720 PF00425 chorismate binding enzyme DQU53_05725 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DQU53_05725 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DQU53_05725 PF16582 Middle domain of thiamine pyrophosphate DQU53_05730 PF00561 alpha/beta hydrolase fold DQU53_05735 PF00378 Enoyl-CoA hydratase/isomerase DQU53_05740 PF09023 Staphostatin B DQU53_05745 PF05543 Staphopain peptidase C47 DQU53_05745 PF14731 Staphopain proregion DQU53_05755 PF00155 Aminotransferase class I and II DQU53_05760 PF01757 Acyltransferase family DQU53_05775 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase DQU53_05775 PF13457 GW (Gly-Tryp) dipeptide domain DQU53_05780 PF13673 Acetyltransferase (GNAT) domain DQU53_05785 PF10804 Protein of unknown function (DUF2538) DQU53_05790 PF03816 Cell envelope-related transcriptional attenuator domain DQU53_05795 PF00144 Beta-lactamase DQU53_05800 PF03626 Prokaryotic Cytochrome C oxidase subunit IV DQU53_05805 PF00510 Cytochrome c oxidase subunit III DQU53_05810 PF00115 Cytochrome C and Quinol oxidase polypeptide I DQU53_05815 PF00116 Cytochrome C oxidase subunit II, periplasmic domain DQU53_05815 PF02790 Cytochrome C oxidase subunit II, transmembrane domain DQU53_05830 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain DQU53_05830 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain DQU53_05835 PF00731 AIR carboxylase DQU53_05840 PF02222 ATP-grasp domain DQU53_05840 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain DQU53_05840 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DQU53_05845 PF01259 SAICAR synthetase DQU53_05850 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase DQU53_05860 PF02769 AIR synthase related protein, C-terminal domain DQU53_05860 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain DQU53_05860 PF00586 AIR synthase related protein, N-terminal domain DQU53_05865 PF13537 Glutamine amidotransferase domain DQU53_05865 PF00156 Phosphoribosyl transferase domain DQU53_05870 PF00586 AIR synthase related protein, N-terminal domain DQU53_05870 PF02769 AIR synthase related protein, C-terminal domain DQU53_05875 PF00551 Formyl transferase DQU53_05880 PF01808 AICARFT/IMPCHase bienzyme DQU53_05880 PF02142 MGS-like domain DQU53_05885 PF02844 Phosphoribosylglycinamide synthetase, N domain DQU53_05885 PF02843 Phosphoribosylglycinamide synthetase, C domain DQU53_05885 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain DQU53_05890 PF02361 Cobalt transport protein DQU53_05895 PF00005 ABC transporter DQU53_05900 PF09819 ABC-type cobalt transport system, permease component DQU53_05925 PF10672 S-adenosylmethionine-dependent methyltransferase DQU53_05925 PF17785 PUA-like domain DQU53_05935 PF00381 PTS HPr component phosphorylation site DQU53_05940 PF00391 PEP-utilising enzyme, mobile domain DQU53_05940 PF05524 PEP-utilising enzyme, N-terminal DQU53_05940 PF02896 PEP-utilising enzyme, TIM barrel domain DQU53_05945 PF00462 Glutaredoxin DQU53_05950 PF01654 Cytochrome bd terminal oxidase subunit I DQU53_05955 PF02322 Cytochrome bd terminal oxidase subunit II DQU53_05960 PF02080 TrkA-C domain DQU53_05960 PF02254 TrkA-N domain DQU53_05965 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain DQU53_05965 PF00753 Metallo-beta-lactamase superfamily DQU53_05965 PF17770 Ribonuclease J C-terminal domain DQU53_05980 PF01327 Polypeptide deformylase DQU53_05990 PF00676 Dehydrogenase E1 component DQU53_05995 PF02780 Transketolase, C-terminal domain DQU53_05995 PF02779 Transketolase, pyrimidine binding domain DQU53_06000 PF00364 Biotin-requiring enzyme DQU53_06000 PF02817 e3 binding domain DQU53_06000 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) DQU53_06005 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DQU53_06005 PF07992 Pyridine nucleotide-disulphide oxidoreductase DQU53_06010 PF05256 Uncharacterised protein family (UPF0223) DQU53_06020 PF00005 ABC transporter DQU53_06020 PF08402 TOBE domain DQU53_06025 PF00528 Binding-protein-dependent transport system inner membrane component DQU53_06030 PF00528 Binding-protein-dependent transport system inner membrane component DQU53_06035 PF13416 Bacterial extracellular solute-binding protein DQU53_06050 PF01566 Natural resistance-associated macrophage protein DQU53_06055 PF06335 Protein of unknown function (DUF1054) DQU53_06060 PF00459 Inositol monophosphatase family DQU53_06085 PF07408 Protein of unknown function (DUF1507) DQU53_06090 PF01098 Cell cycle protein DQU53_06095 PF02785 Biotin carboxylase C-terminal domain DQU53_06095 PF00289 Biotin carboxylase, N-terminal domain DQU53_06095 PF00364 Biotin-requiring enzyme DQU53_06095 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DQU53_06095 PF00682 HMGL-like DQU53_06095 PF02436 Conserved carboxylase domain DQU53_06100 PF02628 Cytochrome oxidase assembly protein DQU53_06105 PF01040 UbiA prenyltransferase family DQU53_06125 PF06133 Control of competence regulator ComK, YlbF/YmcA DQU53_06130 PF03009 Glycerophosphoryl diester phosphodiesterase family DQU53_06135 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) DQU53_06150 PF01467 Cytidylyltransferase-like DQU53_06155 PF05636 HIGH Nucleotidyl Transferase DQU53_06170 PF01783 Ribosomal L32p protein family DQU53_06175 PF00239 Resolvase, N terminal domain DQU53_06175 PF02796 Helix-turn-helix domain of resolvase DQU53_06240 PF00436 Single-strand binding protein family DQU53_06450 PF13457 GW (Gly-Tryp) dipeptide domain DQU53_06450 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase DQU53_06470 PF01510 N-acetylmuramoyl-L-alanine amidase DQU53_06470 PF05257 CHAP domain DQU53_06470 PF08460 Bacterial SH3 domain DQU53_06485 PF00746 LPXTG cell wall anchor motif DQU53_06485 PF05031 Iron Transport-associated domain DQU53_06485 PF04650 YSIRK type signal peptide DQU53_06490 PF05031 Iron Transport-associated domain DQU53_06490 PF00746 LPXTG cell wall anchor motif DQU53_06495 PF05031 Iron Transport-associated domain DQU53_06505 PF01497 Periplasmic binding protein DQU53_06510 PF01032 FecCD transport family DQU53_06515 PF04203 Sortase domain DQU53_06520 PF03992 Antibiotic biosynthesis monooxygenase DQU53_06530 PF08032 RNA 2'-O ribose methyltransferase substrate binding DQU53_06530 PF00588 SpoU rRNA Methylase family DQU53_06535 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain DQU53_06535 PF01409 tRNA synthetases class II core domain (F) DQU53_06540 PF03483 B3/4 domain DQU53_06540 PF03484 tRNA synthetase B5 domain DQU53_06540 PF01588 Putative tRNA binding domain DQU53_06540 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain DQU53_06540 PF03147 Ferredoxin-fold anticodon binding domain DQU53_06565 PF11858 Domain of unknown function (DUF3378) DQU53_06565 PF01351 Ribonuclease HII DQU53_06570 PF05164 Cell division protein ZapA DQU53_06580 PF14791 DNA polymerase beta thumb DQU53_06580 PF02811 PHP domain DQU53_06580 PF14716 Helix-hairpin-helix domain DQU53_06585 PF00488 MutS domain V DQU53_06585 PF01713 Smr domain DQU53_06590 PF00085 Thioredoxin DQU53_06600 PF01541 GIY-YIG catalytic domain DQU53_06600 PF08459 UvrC Helix-hairpin-helix N-terminal DQU53_06600 PF02151 UvrB/uvrC motif DQU53_06605 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit DQU53_06610 PF02910 Fumarate reductase flavoprotein C-term DQU53_06610 PF00890 FAD binding domain DQU53_06615 PF13085 2Fe-2S iron-sulfur cluster binding domain DQU53_06615 PF13183 4Fe-4S dicluster domain DQU53_06620 PF01177 Asp/Glu/Hydantoin racemase DQU53_06625 PF01725 Ham1 family DQU53_06630 PF12850 Calcineurin-like phosphoesterase superfamily domain DQU53_06650 PF16104 Formyl peptide receptor-like 1 inhibitory protein DQU53_06660 PF12199 Extracellular fibrinogen binding protein C terminal DQU53_06700 PF07968 Leukocidin/Hemolysin toxin family DQU53_06725 PF09199 Staphylococcal superantigen-like OB-fold domain DQU53_06725 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain DQU53_06730 PF09199 Staphylococcal superantigen-like OB-fold domain DQU53_06730 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain DQU53_06735 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain DQU53_06735 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain DQU53_06740 PF00696 Amino acid kinase family DQU53_06745 PF03606 C4-dicarboxylate anaerobic carrier DQU53_06770 PF05480 Staphylococcus haemolytic protein DQU53_06775 PF05480 Staphylococcus haemolytic protein DQU53_06780 PF13419 Haloacid dehalogenase-like hydrolase DQU53_06790 PF10079 Bacillithiol biosynthesis BshC DQU53_06795 PF02381 MraZ protein, putative antitoxin-like DQU53_06800 PF01795 MraW methylase family DQU53_06805 PF04977 Septum formation initiator DQU53_06815 PF00953 Glycosyl transferase family 4 DQU53_06820 PF02875 Mur ligase family, glutamate ligase domain DQU53_06820 PF08245 Mur ligase middle domain DQU53_06825 PF08478 POTRA domain, FtsQ-type DQU53_06825 PF03799 Cell division protein FtsQ DQU53_06830 PF02491 SHS2 domain inserted in FTSA DQU53_06835 PF12327 FtsZ family, C-terminal domain DQU53_06835 PF00091 Tubulin/FtsZ family, GTPase domain DQU53_06845 PF01168 Alanine racemase, N-terminal domain DQU53_06850 PF04472 Cell division protein SepF DQU53_06855 PF02325 YGGT family DQU53_06860 PF17774 Putative RNA-binding domain in YlmH DQU53_06860 PF01479 S4 domain DQU53_06865 PF05103 DivIVA protein DQU53_06870 PF08264 Anticodon-binding domain of tRNA DQU53_06870 PF00133 tRNA synthetases class I (I, L, M and V) DQU53_06870 PF06827 Zinc finger found in FPG and IleRS DQU53_06875 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DQU53_06890 PF01252 Signal peptidase (SPase) II DQU53_06895 PF01479 S4 domain DQU53_06895 PF00849 RNA pseudouridylate synthase DQU53_06900 PF00156 Phosphoribosyl transferase domain DQU53_06905 PF00860 Permease family DQU53_06910 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain DQU53_06910 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain DQU53_06915 PF01979 Amidohydrolase family DQU53_06920 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain DQU53_06920 PF00117 Glutamine amidotransferase class-I DQU53_06925 PF02142 MGS-like domain DQU53_06925 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DQU53_06925 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain DQU53_06930 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family DQU53_06935 PF00156 Phosphoribosyl transferase domain DQU53_06955 PF00625 Guanylate kinase DQU53_06960 PF01192 RNA polymerase Rpb6 DQU53_06965 PF04127 DNA / pantothenate metabolism flavoprotein DQU53_06965 PF02441 Flavoprotein DQU53_06970 PF18319 PriA DNA helicase Cys-rich region (CRR) domain DQU53_06970 PF17764 3′ DNA-binding domain (3′BD) DQU53_06970 PF04851 Type III restriction enzyme, res subunit DQU53_06970 PF18074 Primosomal protein N C-terminal domain DQU53_06970 PF00271 Helicase conserved C-terminal domain DQU53_06980 PF05154 TM2 domain DQU53_06985 PF01327 Polypeptide deformylase DQU53_06990 PF02911 Formyl transferase, C-terminal domain DQU53_06990 PF00551 Formyl transferase DQU53_06995 PF01189 16S rRNA methyltransferase RsmB/F DQU53_06995 PF01029 NusB family DQU53_07000 PF04055 Radical SAM superfamily DQU53_07010 PF03793 PASTA domain DQU53_07010 PF00069 Protein kinase domain DQU53_07015 PF03193 RsgA GTPase DQU53_07015 PF16745 RsgA N-terminal domain DQU53_07020 PF00834 Ribulose-phosphate 3 epimerase family DQU53_07030 PF00830 Ribosomal L28 family DQU53_07035 PF03780 Asp23 family, cell envelope-related function DQU53_07040 PF13684 Dihydroxyacetone kinase family DQU53_07040 PF02734 DAK2 domain DQU53_07045 PF00271 Helicase conserved C-terminal domain DQU53_07045 PF00270 DEAD/DEAH box helicase DQU53_07045 PF17191 RecG wedge domain DQU53_07050 PF03061 Thioesterase superfamily DQU53_07055 PF02504 Fatty acid synthesis protein DQU53_07060 PF00698 Acyl transferase domain DQU53_07075 PF00550 Phosphopantetheine attachment site DQU53_07080 PF00035 Double-stranded RNA binding motif DQU53_07080 PF14622 Ribonuclease-III-like DQU53_07085 PF02463 RecF/RecN/SMC N terminal domain DQU53_07085 PF06470 SMC proteins Flexible Hinge Domain DQU53_07090 PF00448 SRP54-type protein, GTPase domain DQU53_07090 PF02881 SRP54-type protein, helical bundle domain DQU53_07095 PF04297 Putative helix-turn-helix protein, YlxM / p13 like DQU53_07100 PF00448 SRP54-type protein, GTPase domain DQU53_07100 PF02978 Signal peptide binding domain DQU53_07100 PF02881 SRP54-type protein, helical bundle domain DQU53_07105 PF00886 Ribosomal protein S16 DQU53_07110 PF01782 RimM N-terminal domain DQU53_07110 PF05239 PRC-barrel domain DQU53_07115 PF01746 tRNA (Guanine-1)-methyltransferase DQU53_07120 PF01245 Ribosomal protein L19 DQU53_07130 PF01926 50S ribosome-binding GTPase DQU53_07135 PF01351 Ribonuclease HII DQU53_07140 PF08442 ATP-grasp domain DQU53_07140 PF00549 CoA-ligase DQU53_07145 PF00549 CoA-ligase DQU53_07145 PF02629 CoA binding domain DQU53_07150 PF05257 CHAP domain DQU53_07150 PF01476 LysM domain DQU53_07155 PF02388 FemAB family DQU53_07160 PF18255 DNA processing protein A sterile alpha motif domain DQU53_07160 PF02481 DNA recombination-mediator protein A DQU53_07165 PF02481 DNA recombination-mediator protein A DQU53_07170 PF01396 Topoisomerase DNA binding C4 zinc finger DQU53_07170 PF01751 Toprim domain DQU53_07170 PF01131 DNA topoisomerase DQU53_07175 PF01134 Glucose inhibited division protein A DQU53_07180 PF02899 Phage integrase, N-terminal SAM-like domain DQU53_07180 PF00589 Phage integrase family DQU53_07185 PF00227 Proteasome subunit DQU53_07190 PF10431 C-terminal, D2-small domain, of ClpB protein DQU53_07190 PF00004 ATPase family associated with various cellular activities (AAA) DQU53_07190 PF07724 AAA domain (Cdc48 subfamily) DQU53_07195 PF08222 CodY helix-turn-helix domain DQU53_07195 PF06018 CodY GAF-like domain DQU53_07205 PF00318 Ribosomal protein S2 DQU53_07215 PF00889 Elongation factor TS DQU53_07220 PF00696 Amino acid kinase family DQU53_07225 PF01765 Ribosome recycling factor DQU53_07230 PF01255 Putative undecaprenyl diphosphate synthase DQU53_07240 PF13180 PDZ domain DQU53_07240 PF02163 Peptidase family M50 DQU53_07245 PF03129 Anticodon binding domain DQU53_07245 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DQU53_07245 PF04073 Aminoacyl-tRNA editing domain DQU53_07250 PF00929 Exonuclease DQU53_07250 PF14480 DNA polymerase III polC-type N-terminus I DQU53_07250 PF11490 DNA polymerase III polC-type N-terminus II DQU53_07250 PF02811 PHP domain DQU53_07250 PF14579 Helix-hairpin-helix motif DQU53_07250 PF17657 Bacterial DNA polymerase III alpha subunit finger domain DQU53_07250 PF07733 Bacterial DNA polymerase III alpha NTPase domain DQU53_07260 PF17384 RimP C-terminal SH3 domain DQU53_07260 PF02576 RimP N-terminal domain DQU53_07265 PF08529 NusA N-terminal domain DQU53_07265 PF00575 S1 RNA binding domain DQU53_07265 PF13184 NusA-like KH domain DQU53_07270 PF04296 Protein of unknown function (DUF448) DQU53_07275 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family DQU53_07280 PF00009 Elongation factor Tu GTP binding domain DQU53_07280 PF11987 Translation-initiation factor 2 DQU53_07280 PF04760 Translation initiation factor IF-2, N-terminal region DQU53_07285 PF02033 Ribosome-binding factor A DQU53_07290 PF16198 tRNA pseudouridylate synthase B C-terminal domain DQU53_07290 PF01509 TruB family pseudouridylate synthase (N terminal domain) DQU53_07295 PF01687 Riboflavin kinase DQU53_07295 PF06574 FAD synthetase DQU53_07300 PF00312 Ribosomal protein S15 DQU53_07305 PF01138 3' exoribonuclease family, domain 1 DQU53_07305 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain DQU53_07305 PF00013 KH domain DQU53_07305 PF00575 S1 RNA binding domain DQU53_07305 PF03725 3' exoribonuclease family, domain 2 DQU53_07315 PF00753 Metallo-beta-lactamase superfamily DQU53_07315 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain DQU53_07315 PF17770 Ribonuclease J C-terminal domain DQU53_07320 PF17854 FtsK alpha domain DQU53_07320 PF09397 Ftsk gamma domain DQU53_07320 PF01580 FtsK/SpoIIIE family DQU53_07325 PF07702 UTRA domain DQU53_07325 PF00392 Bacterial regulatory proteins, gntR family DQU53_07330 PF05193 Peptidase M16 inactive domain DQU53_07335 PF05193 Peptidase M16 inactive domain DQU53_07335 PF00675 Insulinase (Peptidase family M16) DQU53_07345 PF11868 Protein of unknown function (DUF3388) DQU53_07355 PF01066 CDP-alcohol phosphatidyltransferase DQU53_07360 PF18146 Damage-inducible protein CinA KH domain DQU53_07360 PF02464 Competence-damaged protein DQU53_07360 PF00994 Probable molybdopterin binding domain DQU53_07365 PF00154 recA bacterial DNA recombination protein DQU53_07370 PF01966 HD domain DQU53_07370 PF12072 Domain of unknown function (DUF3552) DQU53_07370 PF00013 KH domain DQU53_07380 PF13277 YmdB-like protein DQU53_07385 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg DQU53_07385 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase DQU53_07385 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II DQU53_07390 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DQU53_07395 PF01910 Thiamine-binding protein DQU53_07400 PF00919 Uncharacterized protein family UPF0004 DQU53_07400 PF04055 Radical SAM superfamily DQU53_07400 PF01938 TRAM domain DQU53_07415 PF05188 MutS domain II DQU53_07415 PF05190 MutS family domain IV DQU53_07415 PF00488 MutS domain V DQU53_07415 PF01624 MutS domain I DQU53_07415 PF05192 MutS domain III DQU53_07420 PF01119 DNA mismatch repair protein, C-terminal domain DQU53_07420 PF08676 MutL C terminal dimerisation domain DQU53_07425 PF04309 Glycerol-3-phosphate responsive antiterminator DQU53_07430 PF00230 Major intrinsic protein DQU53_07435 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DQU53_07435 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DQU53_07440 PF16901 C-terminal domain of alpha-glycerophosphate oxidase DQU53_07440 PF01266 FAD dependent oxidoreductase DQU53_07455 PF17209 Hfq protein DQU53_07460 PF00255 Glutathione peroxidase DQU53_07470 PF06838 Methionine gamma-lyase DQU53_07475 PF13411 MerR HTH family regulatory protein DQU53_07480 PF00120 Glutamine synthetase, catalytic domain DQU53_07480 PF03951 Glutamine synthetase, beta-Grasp domain DQU53_07555 PF13396 Phospholipase_D-nuclease N-terminal DQU53_07555 PF13091 PLD-like domain DQU53_07560 PF00005 ABC transporter DQU53_07575 PF00072 Response regulator receiver domain DQU53_07575 PF00196 Bacterial regulatory proteins, luxR family DQU53_07585 PF00565 Staphylococcal nuclease homologue DQU53_07600 PF13840 ACT domain DQU53_07600 PF00696 Amino acid kinase family DQU53_07605 PF00742 Homoserine dehydrogenase DQU53_07605 PF01842 ACT domain DQU53_07605 PF03447 Homoserine dehydrogenase, NAD binding domain DQU53_07610 PF00291 Pyridoxal-phosphate dependent enzyme DQU53_07615 PF08544 GHMP kinases C terminal DQU53_07615 PF00288 GHMP kinases N terminal domain DQU53_07635 PF00324 Amino acid permease DQU53_07640 PF00199 Catalase DQU53_07640 PF06628 Catalase-related immune-responsive DQU53_07645 PF00471 Ribosomal protein L33 DQU53_07650 PF00253 Ribosomal protein S14p/S29e DQU53_07655 PF00478 IMP dehydrogenase / GMP reductase domain DQU53_07665 PF00188 Cysteine-rich secretory protein family DQU53_07670 PF00717 Peptidase S24-like DQU53_07670 PF01726 LexA DNA binding domain DQU53_07680 PF05979 Bacterial protein of unknown function (DUF896) DQU53_07685 PF02780 Transketolase, C-terminal domain DQU53_07685 PF02779 Transketolase, pyrimidine binding domain DQU53_07685 PF00456 Transketolase, thiamine diphosphate binding domain DQU53_07690 PF03672 Uncharacterised protein family (UPF0154) DQU53_07700 PF07301 Protein of unknown function (DUF1453) DQU53_07705 PF00149 Calcineurin-like phosphoesterase DQU53_07705 PF12320 Type 5 capsule protein repressor C-terminal domain DQU53_07710 PF13476 AAA domain DQU53_07715 PF01741 Large-conductance mechanosensitive channel, MscL DQU53_07720 PF02028 BCCT, betaine/carnitine/choline family transporter DQU53_07730 PF00694 Aconitase C-terminal domain DQU53_07730 PF00330 Aconitase family (aconitate hydratase) DQU53_07735 PF03061 Thioesterase superfamily DQU53_07755 PF02660 Glycerol-3-phosphate acyltransferase DQU53_07760 PF00204 DNA gyrase B DQU53_07760 PF01751 Toprim domain DQU53_07760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DQU53_07760 PF00986 DNA gyrase B subunit, carboxyl terminus DQU53_07765 PF03989 DNA gyrase C-terminal domain, beta-propeller DQU53_07765 PF00521 DNA gyrase/topoisomerase IV, subunit A DQU53_07775 PF01235 Sodium:alanine symporter family DQU53_07780 PF03123 CAT RNA binding domain DQU53_07780 PF00874 PRD domain DQU53_07790 PF01594 AI-2E family transporter DQU53_07795 PF09924 Uncharacterised conserved protein (DUF2156) DQU53_07795 PF03706 Lysylphosphatidylglycerol synthase TM region DQU53_07800 PF01625 Peptide methionine sulfoxide reductase DQU53_07805 PF03816 Cell envelope-related transcriptional attenuator domain DQU53_07810 PF01361 Tautomerase enzyme DQU53_07815 PF00817 impB/mucB/samB family DQU53_07815 PF11799 impB/mucB/samB family C-terminal domain DQU53_07815 PF11798 IMS family HHH motif DQU53_07820 PF02153 Prephenate dehydrogenase DQU53_07825 PF05343 M42 glutamyl aminopeptidase DQU53_07830 PF00425 chorismate binding enzyme DQU53_07830 PF04715 Anthranilate synthase component I, N terminal region DQU53_07835 PF00117 Glutamine amidotransferase class-I DQU53_07840 PF00591 Glycosyl transferase family, a/b domain DQU53_07845 PF00218 Indole-3-glycerol phosphate synthase DQU53_07850 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase DQU53_07855 PF00291 Pyridoxal-phosphate dependent enzyme DQU53_07860 PF00290 Tryptophan synthase alpha chain DQU53_07865 PF02388 FemAB family DQU53_07870 PF02388 FemAB family DQU53_07890 PF00005 ABC transporter DQU53_07895 PF00005 ABC transporter DQU53_07900 PF00528 Binding-protein-dependent transport system inner membrane component DQU53_07905 PF00528 Binding-protein-dependent transport system inner membrane component DQU53_07920 PF01432 Peptidase family M3 DQU53_07920 PF08439 Oligopeptidase F DQU53_07925 PF01895 PhoU domain DQU53_07930 PF00005 ABC transporter DQU53_07935 PF00528 Binding-protein-dependent transport system inner membrane component DQU53_07940 PF00528 Binding-protein-dependent transport system inner membrane component DQU53_07945 PF12849 PBP superfamily domain DQU53_07955 PF13509 S1 domain DQU53_07955 PF17783 CvfB-like winged helix domain DQU53_07960 PF12848 ABC transporter DQU53_07960 PF00005 ABC transporter DQU53_07970 PF13840 ACT domain DQU53_07970 PF01842 ACT domain DQU53_07970 PF00696 Amino acid kinase family DQU53_07975 PF01118 Semialdehyde dehydrogenase, NAD binding domain DQU53_07975 PF02774 Semialdehyde dehydrogenase, dimerisation domain DQU53_07980 PF00701 Dihydrodipicolinate synthetase family DQU53_07985 PF05173 Dihydrodipicolinate reductase, C-terminus DQU53_07985 PF01113 Dihydrodipicolinate reductase, N-terminus DQU53_07990 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal DQU53_07990 PF14602 Hexapeptide repeat of succinyl-transferase DQU53_07990 PF00132 Bacterial transferase hexapeptide (six repeats) DQU53_07995 PF01546 Peptidase family M20/M25/M40 DQU53_08000 PF00842 Alanine racemase, C-terminal domain DQU53_08000 PF01168 Alanine racemase, N-terminal domain DQU53_08005 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain DQU53_08005 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain DQU53_08015 PF00313 'Cold-shock' DNA-binding domain DQU53_08030 PF00708 Acylphosphatase DQU53_08040 PF05816 Toxic anion resistance protein (TelA) DQU53_08045 PF05525 Branched-chain amino acid transport protein DQU53_08050 PF00092 von Willebrand factor type A domain DQU53_08055 PF07728 AAA domain (dynein-related subfamily) DQU53_08055 PF08406 CbbQ/NirQ/NorQ C-terminal DQU53_08070 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) DQU53_08070 PF00364 Biotin-requiring enzyme DQU53_08070 PF02817 e3 binding domain DQU53_08075 PF00676 Dehydrogenase E1 component DQU53_08075 PF16870 2-oxoglutarate dehydrogenase C-terminal DQU53_08075 PF02779 Transketolase, pyrimidine binding domain DQU53_08080 PF18719 ArlS sensor domain DQU53_08080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DQU53_08080 PF00512 His Kinase A (phospho-acceptor) domain DQU53_08085 PF00486 Transcriptional regulatory protein, C terminal DQU53_08085 PF00072 Response regulator receiver domain DQU53_08100 PF01569 PAP2 superfamily DQU53_08105 PF04101 Glycosyltransferase family 28 C-terminal domain DQU53_08105 PF03033 Glycosyltransferase family 28 N-terminal domain DQU53_08115 PF01471 Putative peptidoglycan binding domain DQU53_08115 PF03572 Peptidase family S41 DQU53_08115 PF13180 PDZ domain DQU53_08120 PF06855 YozE SAM-like fold DQU53_08125 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 DQU53_08130 PF01641 SelR domain DQU53_08135 PF01625 Peptide methionine sulfoxide reductase DQU53_08140 PF02645 Uncharacterised protein, DegV family COG1307 DQU53_08145 PF00186 Dihydrofolate reductase DQU53_08150 PF00303 Thymidylate synthase DQU53_08155 PF06491 Disulphide isomerase DQU53_08160 PF13769 Virulence factor DQU53_08160 PF08712 Scaffold protein Nfu/NifU N terminal DQU53_08165 PF08712 Scaffold protein Nfu/NifU N terminal DQU53_08165 PF13769 Virulence factor DQU53_08170 PF10782 Zinc-finger DQU53_08175 PF02592 Putative vitamin uptake transporter DQU53_08185 PF07564 Domain of Unknown Function (DUF1542) DQU53_08185 PF01468 GA module DQU53_08185 PF04650 YSIRK type signal peptide DQU53_08190 PF07690 Major Facilitator Superfamily DQU53_08195 PF13520 Amino acid permease DQU53_08200 PF00291 Pyridoxal-phosphate dependent enzyme DQU53_08205 PF01262 Alanine dehydrogenase/PNT, C-terminal domain DQU53_08205 PF05222 Alanine dehydrogenase/PNT, N-terminal domain DQU53_08210 PF01367 5'-3' exonuclease, C-terminal SAM fold DQU53_08210 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain DQU53_08215 PF00350 Dynamin family DQU53_08230 PF01170 Putative RNA methylase family UPF0020 DQU53_08230 PF02926 THUMP domain DQU53_08240 PF05103 DivIVA protein DQU53_08245 PF06908 YspA SLOG family DQU53_08265 PF03838 Recombination protein U DQU53_08270 PF00905 Penicillin binding protein transpeptidase domain DQU53_08270 PF00912 Transglycosylase DQU53_08280 PF00633 Helix-hairpin-helix motif DQU53_08280 PF10576 Iron-sulfur binding domain of endonuclease III DQU53_08280 PF00730 HhH-GPD superfamily base excision DNA repair protein DQU53_08285 PF07261 Replication initiation and membrane attachment DQU53_08290 PF01336 OB-fold nucleic acid binding domain DQU53_08290 PF00152 tRNA synthetases class II (D, K and N) DQU53_08295 PF13307 Helicase C-terminal domain DQU53_08295 PF00929 Exonuclease DQU53_08300 PF03099 Biotin/lipoate A/B protein ligase family DQU53_08300 PF02237 Biotin protein ligase C terminal domain DQU53_08300 PF08279 HTH domain DQU53_08305 PF13735 tRNA nucleotidyltransferase domain 2 putative DQU53_08305 PF12627 Probable RNA and SrmB- binding site of polymerase A DQU53_08305 PF01743 Poly A polymerase head domain DQU53_08310 PF13439 Glycosyltransferase Family 4 DQU53_08310 PF00534 Glycosyl transferases group 1 DQU53_08315 PF03819 MazG nucleotide pyrophosphohydrolase domain DQU53_08320 PF04298 Putative neutral zinc metallopeptidase DQU53_08325 PF07187 Protein of unknown function (DUF1405) DQU53_08330 PF08864 UPF0302 domain DQU53_08330 PF08858 IDEAL domain DQU53_08340 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) DQU53_08345 PF01761 3-dehydroquinate synthase DQU53_08350 PF01264 Chorismate synthase DQU53_08360 PF00334 Nucleoside diphosphate kinase DQU53_08365 PF00348 Polyprenyl synthetase DQU53_08370 PF01209 ubiE/COQ5 methyltransferase family DQU53_08385 PF00216 Bacterial DNA-binding protein DQU53_08390 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus DQU53_08390 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus DQU53_08395 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal DQU53_08395 PF01926 50S ribosome-binding GTPase DQU53_08400 PF00575 S1 RNA binding domain DQU53_08420 PF02224 Cytidylate kinase DQU53_08425 PF17763 Glutaminase/Asparaginase C-terminal domain DQU53_08425 PF00710 Asparaginase, N-terminal DQU53_08440 PF01476 LysM domain DQU53_08445 PF00270 DEAD/DEAH box helicase DQU53_08445 PF00271 Helicase conserved C-terminal domain DQU53_08460 PF12822 ECF transporter, substrate-specific component DQU53_08500 PF05257 CHAP domain DQU53_08500 PF01520 N-acetylmuramoyl-L-alanine amidase DQU53_08500 PF08460 Bacterial SH3 domain DQU53_08550 PF01464 Transglycosylase SLT domain DQU53_08600 PF00574 Clp protease DQU53_08805 PF14659 Phage integrase, N-terminal SAM-like domain DQU53_08805 PF00589 Phage integrase family DQU53_08820 PF00672 HAMP domain DQU53_08820 PF18698 Histidine kinase sensor domain DQU53_08820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DQU53_08820 PF00512 His Kinase A (phospho-acceptor) domain DQU53_08825 PF00072 Response regulator receiver domain DQU53_08825 PF00486 Transcriptional regulatory protein, C terminal DQU53_08830 PF00849 RNA pseudouridylate synthase DQU53_08830 PF01479 S4 domain DQU53_08835 PF04079 Segregation and condensation complex subunit ScpB DQU53_08840 PF02616 Segregation and condensation protein ScpA DQU53_08850 PF02899 Phage integrase, N-terminal SAM-like domain DQU53_08850 PF00589 Phage integrase family DQU53_08855 PF01475 Ferric uptake regulator family DQU53_08860 PF00293 NUDIX domain DQU53_08865 PF00248 Aldo/keto reductase family DQU53_08875 PF00106 short chain dehydrogenase DQU53_08880 PF03807 NADP oxidoreductase coenzyme F420-dependent DQU53_08880 PF14748 Pyrroline-5-carboxylate reductase dimerisation DQU53_08885 PF12706 Beta-lactamase superfamily domain DQU53_08890 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain DQU53_08890 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain DQU53_08900 PF00128 Alpha amylase, catalytic domain DQU53_08900 PF16657 Maltogenic Amylase, C-terminal domain DQU53_08905 PF00356 Bacterial regulatory proteins, lacI family DQU53_08925 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase DQU53_08925 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain DQU53_08930 PF07687 Peptidase dimerisation domain DQU53_08930 PF01546 Peptidase family M20/M25/M40 DQU53_08940 PF11728 Putative aromatic acid exporter C-terminal domain DQU53_08940 PF06081 Aromatic acid exporter family member 1 DQU53_08945 PF06491 Disulphide isomerase DQU53_08950 PF02817 e3 binding domain DQU53_08950 PF00364 Biotin-requiring enzyme DQU53_08950 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) DQU53_08955 PF02780 Transketolase, C-terminal domain DQU53_08955 PF02779 Transketolase, pyrimidine binding domain DQU53_08960 PF00676 Dehydrogenase E1 component DQU53_08965 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DQU53_08965 PF07992 Pyridine nucleotide-disulphide oxidoreductase DQU53_08970 PF13476 AAA domain DQU53_08975 PF02863 Arginine repressor, C-terminal domain DQU53_08975 PF01316 Arginine repressor, DNA binding domain DQU53_08980 PF00348 Polyprenyl synthetase DQU53_08985 PF02609 Exonuclease VII small subunit DQU53_08990 PF02601 Exonuclease VII, large subunit DQU53_08990 PF13742 OB-fold nucleic acid binding domain DQU53_08995 PF01029 NusB family DQU53_09000 PF03780 Asp23 family, cell envelope-related function DQU53_09005 PF02785 Biotin carboxylase C-terminal domain DQU53_09005 PF00289 Biotin carboxylase, N-terminal domain DQU53_09005 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DQU53_09010 PF00364 Biotin-requiring enzyme DQU53_09015 PF01132 Elongation factor P (EF-P) OB domain DQU53_09015 PF08207 Elongation factor P (EF-P) KOW-like domain DQU53_09015 PF09285 Elongation factor P, C-terminal DQU53_09020 PF01321 Creatinase/Prolidase N-terminal domain DQU53_09020 PF00557 Metallopeptidase family M24 DQU53_09035 PF03099 Biotin/lipoate A/B protein ligase family DQU53_09040 PF00581 Rhodanese-like domain DQU53_09045 PF00266 Aminotransferase class-V DQU53_09050 PF02347 Glycine cleavage system P-protein DQU53_09055 PF08669 Glycine cleavage T-protein C-terminal barrel domain DQU53_09055 PF01571 Aminomethyltransferase folate-binding domain DQU53_09060 PF01202 Shikimate kinase DQU53_09085 PF07963 Prokaryotic N-terminal methylation motif DQU53_09090 PF00482 Type II secretion system (T2SS), protein F DQU53_09095 PF00437 Type II/IV secretion system protein DQU53_09100 PF00753 Metallo-beta-lactamase superfamily DQU53_09105 PF01910 Thiamine-binding protein DQU53_09110 PF00480 ROK family DQU53_09115 PF06014 Bacterial protein of unknown function (DUF910) DQU53_09125 PF01812 5-formyltetrahydrofolate cyclo-ligase family DQU53_09130 PF00471 Ribosomal protein L33 DQU53_09140 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain DQU53_09140 PF02777 Iron/manganese superoxide dismutases, C-terminal domain DQU53_09145 PF01475 Ferric uptake regulator family DQU53_09150 PF00950 ABC 3 transport family DQU53_09155 PF00005 ABC transporter DQU53_09160 PF01261 Xylose isomerase-like TIM barrel DQU53_09165 PF00271 Helicase conserved C-terminal domain DQU53_09165 PF00270 DEAD/DEAH box helicase DQU53_09170 PF01784 NIF3 (NGG1p interacting factor 3) DQU53_09175 PF04816 tRNA (adenine(22)-N(1))-methyltransferase DQU53_09180 PF04545 Sigma-70, region 4 DQU53_09180 PF03979 Sigma-70 factor, region 1.1 DQU53_09180 PF04539 Sigma-70 region 3 DQU53_09180 PF00140 Sigma-70 factor, region 1.2 DQU53_09180 PF04542 Sigma-70 region 2 DQU53_09185 PF00772 DnaB-like helicase N terminal domain DQU53_09185 PF01807 CHC2 zinc finger DQU53_09185 PF08275 DNA primase catalytic core, N-terminal domain DQU53_09190 PF03618 Kinase/pyrophosphorylase DQU53_09195 PF08279 HTH domain DQU53_09195 PF00571 CBS domain DQU53_09200 PF03129 Anticodon binding domain DQU53_09200 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DQU53_09205 PF11967 Recombination protein O N terminal DQU53_09205 PF02565 Recombination protein O C terminal DQU53_09210 PF01926 50S ribosome-binding GTPase DQU53_09210 PF07650 KH domain DQU53_09215 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region DQU53_09225 PF02130 Uncharacterized protein family UPF0054 DQU53_09230 PF02562 PhoH-like protein DQU53_09240 PF12127 SigmaW regulon antibacterial DQU53_09245 PF01957 NfeD-like C-terminal, partner-binding DQU53_09245 PF01972 Serine dehydrogenase proteinase DQU53_09250 PF01165 Ribosomal protein S21 DQU53_09255 PF00919 Uncharacterized protein family UPF0004 DQU53_09255 PF01938 TRAM domain DQU53_09255 PF04055 Radical SAM superfamily DQU53_09260 PF04452 RNA methyltransferase DQU53_09270 PF01556 DnaJ C terminal domain DQU53_09270 PF00684 DnaJ central domain DQU53_09270 PF00226 DnaJ domain DQU53_09275 PF00012 Hsp70 protein DQU53_09280 PF01025 GrpE DQU53_09285 PF01628 HrcA protein C terminal domain DQU53_09290 PF04055 Radical SAM superfamily DQU53_09290 PF06969 HemN C-terminal domain DQU53_09295 PF06421 GTP-binding protein LepA C-terminus DQU53_09295 PF03144 Elongation factor Tu domain 2 DQU53_09295 PF00009 Elongation factor Tu GTP binding domain DQU53_09295 PF00679 Elongation factor G C-terminus DQU53_09300 PF01649 Ribosomal protein S20 DQU53_09305 PF06144 DNA polymerase III, delta subunit DQU53_09310 PF00753 Metallo-beta-lactamase superfamily DQU53_09310 PF03772 Competence protein DQU53_09310 PF13567 Domain of unknown function (DUF4131) DQU53_09315 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region DQU53_09320 PF16921 Tex protein YqgF-like domain DQU53_09320 PF09371 Tex-like protein N-terminal domain DQU53_09320 PF00575 S1 RNA binding domain DQU53_09320 PF17674 HHH domain DQU53_09325 PF13649 Methyltransferase domain DQU53_09335 PF01966 HD domain DQU53_09340 PF01467 Cytidylyltransferase-like DQU53_09345 PF01985 CRS1 / YhbY (CRM) domain DQU53_09350 PF01488 Shikimate / quinate 5-dehydrogenase DQU53_09350 PF18317 Shikimate 5'-dehydrogenase C-terminal domain DQU53_09350 PF08501 Shikimate dehydrogenase substrate binding domain DQU53_09355 PF01926 50S ribosome-binding GTPase DQU53_09365 PF01048 Phosphorylase superfamily DQU53_09375 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain DQU53_09400 PF01566 Natural resistance-associated macrophage protein DQU53_09405 PF03746 LamB/YcsF family DQU53_09410 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DQU53_09410 PF00289 Biotin carboxylase, N-terminal domain DQU53_09410 PF02785 Biotin carboxylase C-terminal domain DQU53_09415 PF00364 Biotin-requiring enzyme DQU53_09420 PF02626 Carboxyltransferase domain, subdomain A and B DQU53_09425 PF02682 Carboxyltransferase domain, subdomain C and D DQU53_09430 PF01272 Transcription elongation factor, GreA/GreB, C-term DQU53_09430 PF03449 Transcription elongation factor, N-terminal DQU53_09435 PF00485 Phosphoribulokinase / Uridine kinase family DQU53_09455 PF06949 Protein of unknown function (DUF1292) DQU53_09460 PF03652 Holliday junction resolvase DQU53_09465 PF06135 IreB regulatory phosphoprotein DQU53_09470 PF01411 tRNA synthetases class II (A) DQU53_09470 PF02272 DHHA1 domain DQU53_09470 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DQU53_09475 PF13538 UvrD-like helicase C-terminal domain DQU53_09475 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain DQU53_09475 PF14490 Helix-hairpin-helix containing domain DQU53_09500 PF00266 Aminotransferase class-V DQU53_09505 PF00296 Luciferase-like monooxygenase DQU53_09515 PF05532 CsbD-like DQU53_09520 PF02082 Transcriptional regulator DQU53_09525 PF05496 Holliday junction DNA helicase RuvB P-loop domain DQU53_09525 PF12002 MgsA AAA+ ATPase C terminal DQU53_09525 PF16193 AAA C-terminal domain DQU53_09530 PF00899 ThiF family DQU53_09545 PF01336 OB-fold nucleic acid binding domain DQU53_09545 PF00152 tRNA synthetases class II (D, K and N) DQU53_09545 PF02938 GAD domain DQU53_09550 PF13393 Histidyl-tRNA synthetase DQU53_09550 PF03129 Anticodon binding domain DQU53_09555 PF08239 Bacterial SH3 domain DQU53_09555 PF01520 N-acetylmuramoyl-L-alanine amidase DQU53_09565 PF13291 ACT domain DQU53_09565 PF04607 Region found in RelA / SpoT proteins DQU53_09565 PF02824 TGS domain DQU53_09570 PF00156 Phosphoribosyl transferase domain DQU53_09575 PF10141 Single-strand DNA-specific exonuclease, C terminal domain DQU53_09575 PF02272 DHHA1 domain DQU53_09575 PF17768 RecJ OB domain DQU53_09575 PF01368 DHH family DQU53_09580 PF02355 Protein export membrane protein DQU53_09580 PF07549 SecD/SecF GG Motif DQU53_09585 PF02699 Preprotein translocase subunit DQU53_09590 PF01702 Queuine tRNA-ribosyltransferase DQU53_09595 PF02547 Queuosine biosynthesis protein DQU53_09600 PF17864 RuvB AAA lid domain DQU53_09600 PF05496 Holliday junction DNA helicase RuvB P-loop domain DQU53_09600 PF05491 RuvB C-terminal winged helix domain DQU53_09605 PF07499 RuvA, C-terminal domain DQU53_09605 PF01330 RuvA N terminal domain DQU53_09615 PF09269 Domain of unknown function (DUF1967) DQU53_09615 PF01926 50S ribosome-binding GTPase DQU53_09615 PF01018 GTP1/OBG DQU53_09620 PF01016 Ribosomal L27 protein DQU53_09625 PF04327 Cysteine protease Prp DQU53_09630 PF00829 Ribosomal prokaryotic L21 protein DQU53_09685 PF00398 Ribosomal RNA adenine dimethylase DQU53_09700 PF00589 Phage integrase family DQU53_09705 PF02899 Phage integrase, N-terminal SAM-like domain DQU53_09705 PF00589 Phage integrase family DQU53_09710 PF04002 RadC-like JAB domain DQU53_09715 PF01478 Type IV leader peptidase family DQU53_09715 PF06750 Bacterial Peptidase A24 N-terminal domain DQU53_09725 PF02875 Mur ligase family, glutamate ligase domain DQU53_09725 PF08245 Mur ligase middle domain DQU53_09730 PF08264 Anticodon-binding domain of tRNA DQU53_09730 PF00133 tRNA synthetases class I (I, L, M and V) DQU53_09730 PF10458 Valyl tRNA synthetase tRNA binding arm DQU53_09735 PF03352 Methyladenine glycosylase DQU53_09750 PF00202 Aminotransferase class-III DQU53_09755 PF00490 Delta-aminolevulinic acid dehydratase DQU53_09765 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain DQU53_09765 PF03900 Porphobilinogen deaminase, C-terminal domain DQU53_09770 PF01578 Cytochrome C assembly protein DQU53_09775 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain DQU53_09775 PF01488 Shikimate / quinate 5-dehydrogenase DQU53_09775 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain DQU53_09780 PF01926 50S ribosome-binding GTPase DQU53_09785 PF10431 C-terminal, D2-small domain, of ClpB protein DQU53_09785 PF06689 ClpX C4-type zinc finger DQU53_09785 PF07724 AAA domain (Cdc48 subfamily) DQU53_09790 PF05697 Bacterial trigger factor protein (TF) DQU53_09790 PF05698 Bacterial trigger factor protein (TF) C-terminus DQU53_09790 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DQU53_09815 PF00453 Ribosomal protein L20 DQU53_09820 PF01632 Ribosomal protein L35 DQU53_09825 PF00707 Translation initiation factor IF-3, C-terminal domain DQU53_09825 PF05198 Translation initiation factor IF-3, N-terminal domain DQU53_09830 PF00324 Amino acid permease DQU53_09835 PF02824 TGS domain DQU53_09835 PF03129 Anticodon binding domain DQU53_09835 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DQU53_09835 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DQU53_09845 PF07319 Primosomal protein DnaI N-terminus DQU53_09845 PF01695 IstB-like ATP binding protein DQU53_09855 PF03477 ATP cone domain DQU53_09860 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain DQU53_09860 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain DQU53_09865 PF01121 Dephospho-CoA kinase DQU53_09870 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain DQU53_09870 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain DQU53_09870 PF06827 Zinc finger found in FPG and IleRS DQU53_09875 PF01367 5'-3' exonuclease, C-terminal SAM fold DQU53_09875 PF00476 DNA polymerase family A DQU53_09875 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain DQU53_09885 PF16736 Single Cache-like DQU53_09885 PF00512 His Kinase A (phospho-acceptor) domain DQU53_09885 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DQU53_09885 PF00989 PAS fold DQU53_09890 PF00486 Transcriptional regulatory protein, C terminal DQU53_09890 PF00072 Response regulator receiver domain DQU53_09900 PF00180 Isocitrate/isopropylmalate dehydrogenase DQU53_09905 PF00285 Citrate synthase, C-terminal domain DQU53_09910 PF00324 Amino acid permease DQU53_09915 PF00391 PEP-utilising enzyme, mobile domain DQU53_09915 PF00224 Pyruvate kinase, barrel domain DQU53_09915 PF02887 Pyruvate kinase, alpha/beta domain DQU53_09920 PF00365 Phosphofructokinase DQU53_09925 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit DQU53_09930 PF01039 Carboxyl transferase domain DQU53_09930 PF17848 Acetyl-coA carboxylase zinc finger domain DQU53_09935 PF00390 Malic enzyme, N-terminal domain DQU53_09935 PF03949 Malic enzyme, NAD binding domain DQU53_09940 PF14579 Helix-hairpin-helix motif DQU53_09940 PF01336 OB-fold nucleic acid binding domain DQU53_09940 PF02811 PHP domain DQU53_09940 PF17657 Bacterial DNA polymerase III alpha subunit finger domain DQU53_09940 PF07733 Bacterial DNA polymerase III alpha NTPase domain DQU53_09945 PF02272 DHHA1 domain DQU53_09945 PF01368 DHH family DQU53_09950 PF03061 Thioesterase superfamily DQU53_09950 PF00392 Bacterial regulatory proteins, gntR family DQU53_09950 PF00571 CBS domain DQU53_09950 PF07085 DRTGG domain DQU53_09965 PF01321 Creatinase/Prolidase N-terminal domain DQU53_09965 PF00557 Metallopeptidase family M24 DQU53_09975 PF05222 Alanine dehydrogenase/PNT, N-terminal domain DQU53_09975 PF01262 Alanine dehydrogenase/PNT, C-terminal domain DQU53_09980 PF00582 Universal stress protein family DQU53_09985 PF00871 Acetokinase family DQU53_09990 PF02384 N-6 DNA Methylase DQU53_09995 PF08534 Redoxin DQU53_10000 PF01925 Sulfite exporter TauE/SafE DQU53_10005 PF02568 Thiamine biosynthesis protein (ThiI) DQU53_10005 PF02926 THUMP domain DQU53_10010 PF00266 Aminotransferase class-V DQU53_10020 PF06160 Septation ring formation regulator, EzrA DQU53_10025 PF13185 GAF domain DQU53_10035 PF00163 Ribosomal protein S4/S9 N-terminal domain DQU53_10035 PF01479 S4 domain DQU53_10045 PF03009 Glycerophosphoryl diester phosphodiesterase family DQU53_10050 PF02566 OsmC-like protein DQU53_10055 PF00266 Aminotransferase class-V DQU53_10060 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DQU53_10060 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DQU53_10060 PF01842 ACT domain DQU53_10075 PF02378 Phosphotransferase system, EIIC DQU53_10075 PF00367 phosphotransferase system, EIIB DQU53_10080 PF01553 Acyltransferase DQU53_10085 PF13180 PDZ domain DQU53_10090 PF00579 tRNA synthetases class I (W and Y) DQU53_10090 PF01479 S4 domain DQU53_10095 PF00912 Transglycosylase DQU53_10095 PF00905 Penicillin binding protein transpeptidase domain DQU53_10105 PF05031 Iron Transport-associated domain DQU53_10105 PF04650 YSIRK type signal peptide DQU53_10115 PF01268 Formate--tetrahydrofolate ligase DQU53_10120 PF13193 AMP-binding enzyme C-terminal domain DQU53_10120 PF00501 AMP-binding enzyme DQU53_10125 PF00583 Acetyltransferase (GNAT) family DQU53_10130 PF00850 Histone deacetylase domain DQU53_10135 PF00356 Bacterial regulatory proteins, lacI family DQU53_10145 PF00793 DAHP synthetase I family DQU53_10145 PF01817 Chorismate mutase type II DQU53_10160 PF06103 Bacterial protein of unknown function (DUF948) DQU53_10165 PF01225 Mur ligase family, catalytic domain DQU53_10165 PF02875 Mur ligase family, glutamate ligase domain DQU53_10165 PF08245 Mur ligase middle domain DQU53_10170 PF17854 FtsK alpha domain DQU53_10170 PF09397 Ftsk gamma domain DQU53_10170 PF01580 FtsK/SpoIIIE family DQU53_10175 PF14794 Domain of unknown function (DUF4479) DQU53_10175 PF01588 Putative tRNA binding domain DQU53_10180 PF07285 Protein of unknown function (DUF1444) DQU53_10185 PF00085 Thioredoxin DQU53_10190 PF05343 M42 glutamyl aminopeptidase DQU53_10200 PF00753 Metallo-beta-lactamase superfamily DQU53_10205 PF02390 Putative methyltransferase DQU53_10210 PF01636 Phosphotransferase enzyme family DQU53_10215 PF01063 Amino-transferase class IV DQU53_10220 PF01546 Peptidase family M20/M25/M40 DQU53_10230 PF01479 S4 domain DQU53_10230 PF00849 RNA pseudouridylate synthase DQU53_10235 PF14667 Polysaccharide biosynthesis C-terminal domain DQU53_10235 PF01943 Polysaccharide biosynthesis protein DQU53_10245 PF04650 YSIRK type signal peptide DQU53_10245 PF07564 Domain of Unknown Function (DUF1542) DQU53_10245 PF01468 GA module DQU53_10255 PF13603 Leucyl-tRNA synthetase, Domain 2 DQU53_10255 PF09334 tRNA synthetases class I (M) DQU53_10255 PF00133 tRNA synthetases class I (I, L, M and V) DQU53_10255 PF08264 Anticodon-binding domain of tRNA DQU53_10260 PF07690 Major Facilitator Superfamily DQU53_10265 PF16199 Radical_SAM C-terminal domain DQU53_10265 PF04055 Radical SAM superfamily DQU53_10270 PF06962 Putative rRNA methylase DQU53_10275 PF01047 MarR family DQU53_10280 PF12146 Serine aminopeptidase, S33 DQU53_10295 PF01619 Proline dehydrogenase DQU53_10300 PF00885 6,7-dimethyl-8-ribityllumazine synthase DQU53_10305 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase DQU53_10305 PF00925 GTP cyclohydrolase II DQU53_10310 PF00677 Lumazine binding domain DQU53_10315 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region DQU53_10315 PF01872 RibD C-terminal domain DQU53_10325 PF01022 Bacterial regulatory protein, arsR family DQU53_10330 PF02040 Arsenical pump membrane protein DQU53_10335 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase DQU53_10335 PF13457 GW (Gly-Tryp) dipeptide domain DQU53_10345 PF04542 Sigma-70 region 2 DQU53_10365 PF00923 Transaldolase/Fructose-6-phosphate aldolase DQU53_10375 PF02537 CrcB-like protein, Camphor Resistance (CrcB) DQU53_10380 PF02537 CrcB-like protein, Camphor Resistance (CrcB) DQU53_10390 PF00248 Aldo/keto reductase family DQU53_10400 PF02772 S-adenosylmethionine synthetase, central domain DQU53_10400 PF00438 S-adenosylmethionine synthetase, N-terminal domain DQU53_10400 PF02773 S-adenosylmethionine synthetase, C-terminal domain DQU53_10405 PF01293 Phosphoenolpyruvate carboxykinase DQU53_10415 PF09297 NADH pyrophosphatase zinc ribbon domain DQU53_10415 PF00293 NUDIX domain DQU53_10420 PF01809 Putative membrane protein insertion efficiency factor DQU53_10430 PF13193 AMP-binding enzyme C-terminal domain DQU53_10430 PF00501 AMP-binding enzyme DQU53_10495 PF02384 N-6 DNA Methylase DQU53_10495 PF12161 HsdM N-terminal domain DQU53_10510 PF00089 Trypsin DQU53_10515 PF00089 Trypsin DQU53_10520 PF00089 Trypsin DQU53_10550 PF07968 Leukocidin/Hemolysin toxin family DQU53_10555 PF07968 Leukocidin/Hemolysin toxin family DQU53_10585 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain DQU53_10590 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain DQU53_10595 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain DQU53_10600 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain DQU53_10605 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain DQU53_10610 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain DQU53_10615 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain DQU53_10680 PF01208 Uroporphyrinogen decarboxylase (URO-D) DQU53_10700 PF00005 ABC transporter DQU53_10705 PF01230 HIT domain DQU53_10720 PF00639 PPIC-type PPIASE domain DQU53_10725 PF01966 HD domain DQU53_10735 PF00149 Calcineurin-like phosphoesterase DQU53_10750 PF06133 Control of competence regulator ComK, YlbF/YmcA DQU53_10755 PF04286 Protein of unknown function (DUF445) DQU53_10765 PF00072 Response regulator receiver domain DQU53_10765 PF00196 Bacterial regulatory proteins, luxR family DQU53_10770 PF07730 Histidine kinase DQU53_10770 PF13185 GAF domain DQU53_10775 PF00849 RNA pseudouridylate synthase DQU53_10775 PF01479 S4 domain DQU53_10780 PF00206 Lyase DQU53_10780 PF10415 Fumarase C C-terminus DQU53_10800 PF00588 SpoU rRNA Methylase family DQU53_10805 PF08331 Domain of unknown function (DUF1730) DQU53_10810 PF00005 ABC transporter DQU53_10815 PF00528 Binding-protein-dependent transport system inner membrane component DQU53_10980 PF01475 Ferric uptake regulator family DQU53_10985 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DQU53_10985 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DQU53_10990 PF00578 AhpC/TSA family DQU53_10995 PF00202 Aminotransferase class-III DQU53_11000 PF06081 Aromatic acid exporter family member 1 DQU53_11010 PF00005 ABC transporter DQU53_11010 PF00664 ABC transporter transmembrane region DQU53_11015 PF04167 Protein of unknown function (DUF402) DQU53_11020 PF14815 NUDIX domain DQU53_11020 PF00730 HhH-GPD superfamily base excision DNA repair protein DQU53_11020 PF00633 Helix-hairpin-helix motif DQU53_11025 PF04307 LexA-binding, inner membrane-associated putative hydrolase DQU53_11040 PF00005 ABC transporter DQU53_11040 PF01476 LysM domain DQU53_11050 PF02631 RecX family DQU53_11055 PF00912 Transglycosylase DQU53_11060 PF01965 DJ-1/PfpI family DQU53_11070 PF04055 Radical SAM superfamily DQU53_11070 PF08756 YfkB-like domain DQU53_11075 PF03061 Thioesterase superfamily DQU53_11080 PF02073 Thermophilic metalloprotease (M29) DQU53_11085 PF06569 Protein of unknown function (DUF1128) DQU53_11090 PF01451 Low molecular weight phosphotyrosine protein phosphatase DQU53_11100 PF03631 Virulence factor BrkB DQU53_11105 PF00196 Bacterial regulatory proteins, luxR family DQU53_11105 PF00072 Response regulator receiver domain DQU53_11110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DQU53_11110 PF07730 Histidine kinase DQU53_11125 PF00557 Metallopeptidase family M24 DQU53_11130 PF06081 Aromatic acid exporter family member 1 DQU53_11150 PF07685 CobB/CobQ-like glutamine amidotransferase domain DQU53_11155 PF08245 Mur ligase middle domain DQU53_11155 PF08353 Domain of unknown function (DUF1727) DQU53_11160 PF00210 Ferritin-like domain DQU53_11175 PF11799 impB/mucB/samB family C-terminal domain DQU53_11175 PF00817 impB/mucB/samB family DQU53_11185 PF05958 tRNA (Uracil-5-)-methyltransferase DQU53_11190 PF00781 Diacylglycerol kinase catalytic domain DQU53_11200 PF02934 GatB/GatE catalytic domain DQU53_11200 PF02637 GatB domain DQU53_11205 PF01425 Amidase DQU53_11210 PF02686 Glu-tRNAGln amidotransferase C subunit DQU53_11215 PF00474 Sodium:solute symporter family DQU53_11220 PF07537 CamS sex pheromone cAM373 precursor DQU53_11225 PF01653 NAD-dependent DNA ligase adenylation domain DQU53_11225 PF03120 NAD-dependent DNA ligase OB-fold domain DQU53_11225 PF03119 NAD-dependent DNA ligase C4 zinc finger domain DQU53_11225 PF12826 Helix-hairpin-helix motif DQU53_11225 PF00533 BRCA1 C Terminus (BRCT) domain DQU53_11230 PF13361 UvrD-like helicase C-terminal domain DQU53_11230 PF00580 UvrD/REP helicase N-terminal domain DQU53_11235 PF01884 PcrB family DQU53_11240 PF01371 Trp repressor protein DQU53_11245 PF10397 Adenylosuccinate lyase C-terminus DQU53_11245 PF00206 Lyase DQU53_11255 PF14731 Staphopain proregion DQU53_11255 PF05543 Staphopain peptidase C47 DQU53_11265 PF14044 NETI protein DQU53_11270 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) DQU53_11275 PF02540 NAD synthase DQU53_11280 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family DQU53_11280 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain DQU53_11280 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain DQU53_11285 PF02898 Nitric oxide synthase, oxygenase domain DQU53_11290 PF00800 Prephenate dehydratase DQU53_11290 PF01842 ACT domain DQU53_11300 PF00939 Sodium:sulfate symporter transmembrane region DQU53_11310 PF00857 Isochorismatase family DQU53_11315 PF02833 DHHA2 domain DQU53_11315 PF01368 DHH family DQU53_11325 PF00171 Aldehyde dehydrogenase family DQU53_11330 PF10282 Lactonase, 7-bladed beta-propeller DQU53_11380 PF00005 ABC transporter DQU53_11390 PF00005 ABC transporter DQU53_11395 PF00392 Bacterial regulatory proteins, gntR family DQU53_11415 PF03642 MAP domain DQU53_11420 PF03642 MAP domain DQU53_11425 PF03372 Endonuclease/Exonuclease/phosphatase family DQU53_11430 PF07968 Leukocidin/Hemolysin toxin family DQU53_11435 PF07968 Leukocidin/Hemolysin toxin family DQU53_11440 PF07687 Peptidase dimerisation domain DQU53_11440 PF01546 Peptidase family M20/M25/M40 DQU53_11445 PF02386 Cation transport protein DQU53_11455 PF00118 TCP-1/cpn60 chaperonin family DQU53_11460 PF00166 Chaperonin 10 Kd subunit DQU53_11465 PF02517 CPBP intramembrane metalloprotease DQU53_11480 PF00795 Carbon-nitrogen hydrolase DQU53_11485 PF05372 Delta lysin family DQU53_11490 PF04647 Accessory gene regulator B DQU53_11505 PF04397 LytTr DNA-binding domain DQU53_11505 PF00072 Response regulator receiver domain DQU53_11515 PF00294 pfkB family carbohydrate kinase DQU53_11520 PF08244 Glycosyl hydrolases family 32 C terminal DQU53_11520 PF00251 Glycosyl hydrolases family 32 N-terminal domain DQU53_11525 PF13407 Periplasmic binding protein domain DQU53_11525 PF00356 Bacterial regulatory proteins, lacI family DQU53_11530 PF00909 Ammonium Transporter Family DQU53_11535 PF01206 Sulfurtransferase TusA DQU53_11540 PF04143 Sulphur transport DQU53_11545 PF02629 CoA binding domain DQU53_11545 PF06971 Putative DNA-binding protein N-terminus DQU53_11550 PF00005 ABC transporter DQU53_11550 PF16326 ABC transporter C-terminal domain DQU53_11550 PF12848 ABC transporter DQU53_11560 PF05190 MutS family domain IV DQU53_11560 PF05192 MutS domain III DQU53_11560 PF05188 MutS domain II DQU53_11560 PF01624 MutS domain I DQU53_11560 PF00488 MutS domain V DQU53_11565 PF00814 Glycoprotease family DQU53_11570 PF00583 Acetyltransferase (GNAT) family DQU53_11575 PF00814 Glycoprotease family DQU53_11580 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE DQU53_11590 PF00920 Dehydratase family DQU53_11595 PF00205 Thiamine pyrophosphate enzyme, central domain DQU53_11595 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DQU53_11595 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DQU53_11605 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain DQU53_11605 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain DQU53_11610 PF00682 HMGL-like DQU53_11610 PF08502 LeuA allosteric (dimerisation) domain DQU53_11615 PF00180 Isocitrate/isopropylmalate dehydrogenase DQU53_11620 PF00330 Aconitase family (aconitate hydratase) DQU53_11625 PF00694 Aconitase C-terminal domain DQU53_11630 PF00585 C-terminal regulatory domain of Threonine dehydratase DQU53_11630 PF00291 Pyridoxal-phosphate dependent enzyme DQU53_11675 PF10263 SprT-like family DQU53_11675 PF17283 SprT-like zinc ribbon domain DQU53_11680 PF16921 Tex protein YqgF-like domain DQU53_11680 PF09371 Tex-like protein N-terminal domain DQU53_11680 PF00575 S1 RNA binding domain DQU53_11680 PF17674 HHH domain DQU53_11685 PF04539 Sigma-70 region 3 DQU53_11685 PF04542 Sigma-70 region 2 DQU53_11685 PF04545 Sigma-70, region 4 DQU53_11690 PF13581 Histidine kinase-like ATPase domain DQU53_11695 PF01740 STAS domain DQU53_11700 PF08673 Phosphoserine phosphatase RsbU, N-terminal domain DQU53_11700 PF07228 Stage II sporulation protein E (SpoIIE) DQU53_11710 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system DQU53_11720 PF00842 Alanine racemase, C-terminal domain DQU53_11720 PF01168 Alanine racemase, N-terminal domain DQU53_11725 PF01648 4'-phosphopantetheinyl transferase superfamily DQU53_11735 PF03703 Bacterial PH domain DQU53_11745 PF02669 K+-transporting ATPase, c chain DQU53_11755 PF03814 Potassium-transporting ATPase A subunit DQU53_11765 PF00512 His Kinase A (phospho-acceptor) domain DQU53_11765 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DQU53_11765 PF13493 Domain of unknown function (DUF4118) DQU53_11765 PF02702 Osmosensitive K+ channel His kinase sensor domain DQU53_11770 PF00072 Response regulator receiver domain DQU53_11770 PF00486 Transcriptional regulatory protein, C terminal DQU53_11785 PF00271 Helicase conserved C-terminal domain DQU53_11785 PF00270 DEAD/DEAH box helicase DQU53_11790 PF08245 Mur ligase middle domain DQU53_11790 PF01225 Mur ligase family, catalytic domain DQU53_11790 PF02875 Mur ligase family, glutamate ligase domain DQU53_11795 PF07478 D-ala D-ala ligase C-terminus DQU53_11795 PF01820 D-ala D-ala ligase N-terminus DQU53_11800 PF01098 Cell cycle protein DQU53_11815 PF02583 Metal-sensitive transcriptional repressor DQU53_11820 PF13091 PLD-like domain DQU53_11820 PF13396 Phospholipase_D-nuclease N-terminal DQU53_11825 PF01966 HD domain DQU53_11850 PF02096 60Kd inner membrane protein DQU53_11855 PF02581 Thiamine monophosphate synthase DQU53_11860 PF02110 Hydroxyethylthiazole kinase family DQU53_11865 PF08543 Phosphomethylpyrimidine kinase DQU53_11870 PF03070 TENA/THI-4/PQQC family DQU53_11875 PF06737 Transglycosylase-like domain DQU53_11880 PF00436 Single-strand binding protein family DQU53_11890 PF07977 FabA-like domain DQU53_11895 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) DQU53_11910 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain DQU53_11910 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain DQU53_11915 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DQU53_11915 PF02874 ATP synthase alpha/beta family, beta-barrel domain DQU53_11920 PF00231 ATP synthase DQU53_11925 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DQU53_11925 PF00306 ATP synthase alpha/beta chain, C terminal domain DQU53_11925 PF02874 ATP synthase alpha/beta family, beta-barrel domain DQU53_11930 PF00213 ATP synthase delta (OSCP) subunit DQU53_11935 PF00430 ATP synthase B/B' CF(0) DQU53_11940 PF00137 ATP synthase subunit C DQU53_11945 PF00119 ATP synthase A chain DQU53_11955 PF02350 UDP-N-acetylglucosamine 2-epimerase DQU53_11965 PF00464 Serine hydroxymethyltransferase DQU53_11970 PF04260 Protein of unknown function (DUF436) DQU53_11975 PF01451 Low molecular weight phosphotyrosine protein phosphatase DQU53_11980 PF03481 Putative GTP-binding controlling metal-binding DQU53_11980 PF01300 Telomere recombination DQU53_11985 PF05175 Methyltransferase small domain DQU53_11985 PF17827 PrmC N-terminal domain DQU53_11990 PF00472 RF-1 domain DQU53_11990 PF03462 PCRF domain DQU53_11995 PF00265 Thymidine kinase DQU53_12005 PF01197 Ribosomal protein L31 DQU53_12010 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DQU53_12010 PF07497 Rho termination factor, RNA-binding domain DQU53_12010 PF07498 Rho termination factor, N-terminal domain DQU53_12015 PF00171 Aldehyde dehydrogenase family DQU53_12025 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) DQU53_12030 PF01116 Fructose-bisphosphate aldolase class-II DQU53_12040 PF00117 Glutamine amidotransferase class-I DQU53_12040 PF06418 CTP synthase N-terminus DQU53_12045 PF05066 HB1, ASXL, restriction endonuclease HTH domain DQU53_12055 PF03630 Fumble DQU53_12075 PF02664 S-Ribosylhomocysteinase (LuxS) DQU53_12085 PF02885 Glycosyl transferase family, helical bundle domain DQU53_12085 PF00591 Glycosyl transferase family, a/b domain DQU53_12085 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain DQU53_12095 PF01791 DeoC/LacD family aldolase DQU53_12100 PF01048 Phosphorylase superfamily DQU53_12105 PF00210 Ferritin-like domain DQU53_12130 PF13460 NAD(P)H-binding DQU53_12135 PF01022 Bacterial regulatory protein, arsR family DQU53_12140 PF01545 Cation efflux family DQU53_12140 PF16916 Dimerisation domain of Zinc Transporter DQU53_12175 PF00005 ABC transporter DQU53_12180 PF01380 SIS domain DQU53_12185 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DQU53_12185 PF02378 Phosphotransferase system, EIIC DQU53_12190 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DQU53_12190 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DQU53_12190 PF08279 HTH domain DQU53_12190 PF05043 Mga helix-turn-helix domain DQU53_12190 PF00874 PRD domain DQU53_12195 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DQU53_12200 PF01232 Mannitol dehydrogenase Rossmann domain DQU53_12200 PF08125 Mannitol dehydrogenase C-terminal domain DQU53_12205 PF01468 GA module DQU53_12205 PF07564 Domain of Unknown Function (DUF1542) DQU53_12210 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DQU53_12210 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DQU53_12210 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DQU53_12210 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DQU53_12220 PF02457 DisA bacterial checkpoint controller nucleotide-binding DQU53_12225 PF00491 Arginase family DQU53_12280 PF10609 NUBPL iron-transfer P-loop NTPase DQU53_12285 PF07690 Major Facilitator Superfamily DQU53_12290 PF17080 Multidrug Resistance efflux pump DQU53_12295 PF07690 Major Facilitator Superfamily DQU53_12300 PF03006 Haemolysin-III related DQU53_12305 PF01704 UTP--glucose-1-phosphate uridylyltransferase DQU53_12310 PF04307 LexA-binding, inner membrane-associated putative hydrolase DQU53_12325 PF01032 FecCD transport family DQU53_12330 PF01032 FecCD transport family DQU53_12335 PF01497 Periplasmic binding protein DQU53_12345 PF01168 Alanine racemase, N-terminal domain DQU53_12350 PF04183 IucA / IucC family DQU53_12350 PF06276 Ferric iron reductase FhuF-like transporter DQU53_12355 PF05977 Transmembrane secretion effector DQU53_12365 PF03780 Asp23 family, cell envelope-related function DQU53_12380 PF02028 BCCT, betaine/carnitine/choline family transporter DQU53_12385 PF00107 Zinc-binding dehydrogenase DQU53_12385 PF08240 Alcohol dehydrogenase GroES-like domain DQU53_12390 PF00107 Zinc-binding dehydrogenase DQU53_12390 PF16884 N-terminal domain of oxidoreductase DQU53_12400 PF00232 Glycosyl hydrolase family 1 DQU53_12405 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DQU53_12405 PF02378 Phosphotransferase system, EIIC DQU53_12410 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit DQU53_12420 PF00294 pfkB family carbohydrate kinase DQU53_12425 PF02502 Ribose/Galactose Isomerase DQU53_12430 PF02502 Ribose/Galactose Isomerase DQU53_12435 PF08220 DeoR-like helix-turn-helix domain DQU53_12435 PF00455 DeoR C terminal sensor domain DQU53_12440 PF02146 Sir2 family DQU53_12455 PF00248 Aldo/keto reductase family DQU53_12460 PF13411 MerR HTH family regulatory protein DQU53_12470 PF02884 Polysaccharide lyase family 8, C-terminal beta-sandwich domain DQU53_12470 PF02278 Polysaccharide lyase family 8, super-sandwich domain DQU53_12470 PF08124 Polysaccharide lyase family 8, N terminal alpha-helical domain DQU53_12480 PF05116 Sucrose-6F-phosphate phosphohydrolase DQU53_12490 PF03306 Alpha-acetolactate decarboxylase DQU53_12495 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DQU53_12495 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DQU53_12495 PF00205 Thiamine pyrophosphate enzyme, central domain DQU53_12505 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) DQU53_12545 PF00380 Ribosomal protein S9/S16 DQU53_12550 PF00572 Ribosomal protein L13 DQU53_12555 PF01416 tRNA pseudouridine synthase DQU53_12560 PF02361 Cobalt transport protein DQU53_12565 PF00005 ABC transporter DQU53_12570 PF00005 ABC transporter DQU53_12575 PF01196 Ribosomal protein L17 DQU53_12580 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain DQU53_12580 PF01000 RNA polymerase Rpb3/RpoA insert domain DQU53_12580 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain DQU53_12585 PF00411 Ribosomal protein S11 DQU53_12590 PF00416 Ribosomal protein S13/S18 DQU53_12595 PF00444 Ribosomal protein L36 DQU53_12600 PF01176 Translation initiation factor 1A / IF-1 DQU53_12605 PF05191 Adenylate kinase, active site lid DQU53_12610 PF00344 SecY translocase DQU53_12615 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A DQU53_12620 PF00327 Ribosomal protein L30p/L7e DQU53_12625 PF03719 Ribosomal protein S5, C-terminal domain DQU53_12625 PF00333 Ribosomal protein S5, N-terminal domain DQU53_12630 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast DQU53_12635 PF00347 Ribosomal protein L6 DQU53_12640 PF00410 Ribosomal protein S8 DQU53_12645 PF00253 Ribosomal protein S14p/S29e DQU53_12650 PF00281 Ribosomal protein L5 DQU53_12650 PF00673 ribosomal L5P family C-terminus DQU53_12655 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 DQU53_12655 PF00467 KOW motif DQU53_12660 PF00238 Ribosomal protein L14p/L23e DQU53_12665 PF00366 Ribosomal protein S17 DQU53_12670 PF00831 Ribosomal L29 protein DQU53_12675 PF00252 Ribosomal protein L16p/L10e DQU53_12680 PF00189 Ribosomal protein S3, C-terminal domain DQU53_12680 PF07650 KH domain DQU53_12685 PF00237 Ribosomal protein L22p/L17e DQU53_12690 PF00203 Ribosomal protein S19 DQU53_12695 PF03947 Ribosomal Proteins L2, C-terminal domain DQU53_12695 PF00181 Ribosomal Proteins L2, RNA binding domain DQU53_12700 PF00276 Ribosomal protein L23 DQU53_12705 PF00573 Ribosomal protein L4/L1 family DQU53_12710 PF00297 Ribosomal protein L3 DQU53_12715 PF00338 Ribosomal protein S10p/S20e DQU53_12725 PF00860 Permease family DQU53_12745 PF06800 Sugar transport protein DQU53_12775 PF00873 AcrB/AcrD/AcrF family DQU53_12780 PF02388 FemAB family DQU53_12795 PF01047 MarR family DQU53_12805 PF01047 MarR family DQU53_12825 PF06463 Molybdenum Cofactor Synthesis C DQU53_12825 PF04055 Radical SAM superfamily DQU53_12830 PF12804 MobA-like NTP transferase domain DQU53_12835 PF02597 ThiS family DQU53_12840 PF02391 MoaE protein DQU53_12845 PF03205 Molybdopterin guanine dinucleotide synthesis protein B DQU53_12850 PF00994 Probable molybdopterin binding domain DQU53_12850 PF03454 MoeA C-terminal region (domain IV) DQU53_12850 PF03453 MoeA N-terminal region (domain I and II) DQU53_12855 PF01967 MoaC family DQU53_12860 PF00994 Probable molybdopterin binding domain DQU53_12865 PF00899 ThiF family DQU53_12870 PF03459 TOBE domain DQU53_12870 PF00005 ABC transporter DQU53_12875 PF00528 Binding-protein-dependent transport system inner membrane component DQU53_12885 PF02634 FdhD/NarQ family DQU53_12895 PF02632 BioY family DQU53_12900 PF01156 Inosine-uridine preferring nucleoside hydrolase DQU53_12910 PF02770 Acyl-CoA dehydrogenase, middle domain DQU53_12910 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DQU53_12910 PF08028 Acyl-CoA dehydrogenase, C-terminal domain DQU53_12915 PF03253 Urea transporter DQU53_12920 PF00547 Urease, gamma subunit DQU53_12925 PF00699 Urease beta subunit DQU53_12930 PF00449 Urease alpha-subunit, N-terminal domain DQU53_12930 PF01979 Amidohydrolase family DQU53_12935 PF02814 UreE urease accessory protein, N-terminal domain DQU53_12935 PF05194 UreE urease accessory protein, C-terminal domain DQU53_12940 PF01730 UreF DQU53_12945 PF02492 CobW/HypB/UreG, nucleotide-binding domain DQU53_12950 PF01774 UreD urease accessory protein DQU53_12995 PF05257 CHAP domain DQU53_13005 PF03553 Na+/H+ antiporter family DQU53_13010 PF02317 NAD/NADP octopine/nopaline dehydrogenase, alpha-helical domain DQU53_13010 PF02558 Ketopantoate reductase PanE/ApbA DQU53_13020 PF05257 CHAP domain DQU53_13030 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DQU53_13030 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DQU53_13035 PF01494 FAD binding domain DQU53_13040 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase DQU53_13040 PF13457 GW (Gly-Tryp) dipeptide domain DQU53_13055 PF04879 Molybdopterin oxidoreductase Fe4S4 domain DQU53_13055 PF12838 4Fe-4S dicluster domain DQU53_13055 PF01568 Molydopterin dinucleotide binding domain DQU53_13055 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region DQU53_13055 PF00384 Molybdopterin oxidoreductase DQU53_13060 PF03816 Cell envelope-related transcriptional attenuator domain DQU53_13075 PF02517 CPBP intramembrane metalloprotease DQU53_13090 PF00324 Amino acid permease DQU53_13110 PF13419 Haloacid dehalogenase-like hydrolase DQU53_13115 PF01758 Sodium Bile acid symporter family DQU53_13125 PF00367 phosphotransferase system, EIIB DQU53_13125 PF02378 Phosphotransferase system, EIIC DQU53_13130 PF01418 Helix-turn-helix domain, rpiR family DQU53_13130 PF01380 SIS domain DQU53_13155 PF07687 Peptidase dimerisation domain DQU53_13155 PF01546 Peptidase family M20/M25/M40 DQU53_13160 PF01979 Amidohydrolase family DQU53_13165 PF17391 Urocanase N-terminal domain DQU53_13165 PF01175 Urocanase Rossmann-like domain DQU53_13165 PF17392 Urocanase C-terminal domain DQU53_13170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DQU53_13170 PF03466 LysR substrate binding domain DQU53_13175 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DQU53_13180 PF00491 Arginase family DQU53_13190 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) DQU53_13195 PF03475 3-alpha domain DQU53_13195 PF03473 MOSC domain DQU53_13205 PF02694 Uncharacterised BCR, YnfA/UPF0060 family DQU53_13220 PF13732 Domain of unknown function (DUF4162) DQU53_13220 PF00005 ABC transporter DQU53_13225 PF05656 Protein of unknown function (DUF805) DQU53_13235 PF02245 Methylpurine-DNA glycosylase (MPG) DQU53_13245 PF03616 Sodium/glutamate symporter DQU53_13250 PF01070 FMN-dependent dehydrogenase DQU53_13255 PF01544 CorA-like Mg2+ transporter protein DQU53_13270 PF07859 alpha/beta hydrolase fold DQU53_13270 PF00934 PE family DQU53_13280 PF07690 Major Facilitator Superfamily DQU53_13295 PF07690 Major Facilitator Superfamily DQU53_13315 PF12802 MarR family DQU53_13325 PF00005 ABC transporter DQU53_13330 PF02687 FtsX-like permease family DQU53_13335 PF00072 Response regulator receiver domain DQU53_13335 PF00486 Transcriptional regulatory protein, C terminal DQU53_13340 PF00512 His Kinase A (phospho-acceptor) domain DQU53_13340 PF00672 HAMP domain DQU53_13340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DQU53_13345 PF04397 LytTr DNA-binding domain DQU53_13355 PF06039 Malate:quinone oxidoreductase (Mqo) DQU53_13360 PF02652 L-lactate permease DQU53_13365 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase DQU53_13375 PF13673 Acetyltransferase (GNAT) domain DQU53_13380 PF08240 Alcohol dehydrogenase GroES-like domain DQU53_13380 PF00107 Zinc-binding dehydrogenase DQU53_13390 PF07992 Pyridine nucleotide-disulphide oxidoreductase DQU53_13425 PF00367 phosphotransferase system, EIIB DQU53_13425 PF02378 Phosphotransferase system, EIIC DQU53_13440 PF16242 Pyridoxamine 5'-phosphate oxidase like DQU53_13450 PF00375 Sodium:dicarboxylate symporter family DQU53_13460 PF01047 MarR family DQU53_13465 PF00011 Hsp20/alpha crystallin family DQU53_13470 PF07690 Major Facilitator Superfamily DQU53_13480 PF13411 MerR HTH family regulatory protein DQU53_13480 PF07739 TipAS antibiotic-recognition domain DQU53_13485 PF00072 Response regulator receiver domain DQU53_13485 PF00196 Bacterial regulatory proteins, luxR family DQU53_13490 PF07730 Histidine kinase DQU53_13490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DQU53_13500 PF02665 Nitrate reductase gamma subunit DQU53_13510 PF13247 4Fe-4S dicluster domain DQU53_13510 PF14711 Respiratory nitrate reductase beta C-terminal DQU53_13515 PF01568 Molydopterin dinucleotide binding domain DQU53_13515 PF00384 Molybdopterin oxidoreductase DQU53_13515 PF14710 Respiratory nitrate reductase alpha N-terminal DQU53_13520 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DQU53_13525 PF00355 Rieske [2Fe-2S] domain DQU53_13530 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain DQU53_13530 PF01077 Nitrite and sulphite reductase 4Fe-4S domain DQU53_13530 PF04324 BFD-like [2Fe-2S] binding domain DQU53_13530 PF18267 Rubredoxin NAD+ reductase C-terminal domain DQU53_13530 PF07992 Pyridine nucleotide-disulphide oxidoreductase DQU53_13540 PF00583 Acetyltransferase (GNAT) family DQU53_13545 PF01226 Formate/nitrite transporter DQU53_13560 PF01297 Zinc-uptake complex component A periplasmic DQU53_13560 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment DQU53_13570 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system DQU53_13595 PF02388 FemAB family DQU53_13600 PF00005 ABC transporter DQU53_13605 PF00528 Binding-protein-dependent transport system inner membrane component DQU53_13610 PF00497 Bacterial extracellular solute-binding proteins, family 3 DQU53_13615 PF07690 Major Facilitator Superfamily DQU53_13630 PF00300 Histidine phosphatase superfamily (branch 1) DQU53_13635 PF16916 Dimerisation domain of Zinc Transporter DQU53_13635 PF01545 Cation efflux family DQU53_13645 PF02216 B domain DQU53_13645 PF11621 C3 binding domain 4 of IgG-bind protein SBI DQU53_13660 PF07968 Leukocidin/Hemolysin toxin family DQU53_13665 PF07968 Leukocidin/Hemolysin toxin family DQU53_13670 PF07968 Leukocidin/Hemolysin toxin family DQU53_13680 PF03744 6-carboxyhexanoate--CoA ligase DQU53_13685 PF00155 Aminotransferase class I and II DQU53_13690 PF04055 Radical SAM superfamily DQU53_13690 PF06968 Biotin and Thiamin Synthesis associated domain DQU53_13695 PF00202 Aminotransferase class-III DQU53_13715 PF00664 ABC transporter transmembrane region DQU53_13715 PF00005 ABC transporter DQU53_13720 PF00664 ABC transporter transmembrane region DQU53_13720 PF00005 ABC transporter DQU53_13720 PF08021 Siderophore-interacting FAD-binding domain DQU53_13720 PF04954 Siderophore-interacting protein DQU53_13740 PF02595 Glycerate kinase family DQU53_13750 PF07690 Major Facilitator Superfamily DQU53_13770 PF00324 Amino acid permease DQU53_13775 PF00999 Sodium/hydrogen exchanger family DQU53_13785 PF13520 Amino acid permease DQU53_13795 PF00144 Beta-lactamase DQU53_13810 PF02558 Ketopantoate reductase PanE/ApbA DQU53_13810 PF08546 Ketopantoate reductase PanE/ApbA C terminal DQU53_13815 PF07690 Major Facilitator Superfamily DQU53_13820 PF00528 Binding-protein-dependent transport system inner membrane component DQU53_13825 PF04069 Substrate binding domain of ABC-type glycine betaine transport system DQU53_13830 PF00528 Binding-protein-dependent transport system inner membrane component DQU53_13835 PF00005 ABC transporter DQU53_13835 PF00571 CBS domain DQU53_13850 PF08818 Domain of unknown function (DU1801) DQU53_13860 PF13520 Amino acid permease DQU53_13865 PF00135 Carboxylesterase family DQU53_13870 PF07690 Major Facilitator Superfamily DQU53_13875 PF03649 Uncharacterised protein family (UPF0014) DQU53_13880 PF00005 ABC transporter DQU53_13885 PF05343 M42 glutamyl aminopeptidase DQU53_13890 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system DQU53_13905 PF06998 Protein of unknown function (DUF1307) DQU53_13910 PF01645 Conserved region in glutamate synthase DQU53_13920 PF07690 Major Facilitator Superfamily DQU53_13925 PF00005 ABC transporter DQU53_13930 PF00005 ABC transporter DQU53_13935 PF12911 N-terminal TM domain of oligopeptide transport permease C DQU53_13935 PF00528 Binding-protein-dependent transport system inner membrane component DQU53_13940 PF00528 Binding-protein-dependent transport system inner membrane component DQU53_13945 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DQU53_13950 PF10100 Staphylopine dehydrogenase DQU53_13965 PF12706 Beta-lactamase superfamily domain DQU53_13975 PF03806 AbgT putative transporter family DQU53_13980 PF02627 Carboxymuconolactone decarboxylase family DQU53_14005 PF00106 short chain dehydrogenase DQU53_14030 PF04507 Csa1 family DQU53_14055 PF04507 Csa1 family DQU53_14060 PF04507 Csa1 family DQU53_14065 PF04507 Csa1 family DQU53_14075 PF00293 NUDIX domain DQU53_14080 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DQU53_14080 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DQU53_14080 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DQU53_14080 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DQU53_14110 PF00746 LPXTG cell wall anchor motif DQU53_14110 PF07501 G5 domain DQU53_14110 PF04650 YSIRK type signal peptide DQU53_14110 PF17041 E domain DQU53_14115 PF13463 Winged helix DNA-binding domain DQU53_14125 PF00483 Nucleotidyl transferase DQU53_14130 PF02986 Fibronectin binding repeat DQU53_14130 PF00746 LPXTG cell wall anchor motif DQU53_14130 PF17961 Bacterial Ig domain DQU53_14130 PF10425 C-terminus of bacterial fibrinogen-binding adhesin DQU53_14130 PF04650 YSIRK type signal peptide DQU53_14135 PF10425 C-terminus of bacterial fibrinogen-binding adhesin DQU53_14135 PF02986 Fibronectin binding repeat DQU53_14135 PF17961 Bacterial Ig domain DQU53_14135 PF04650 YSIRK type signal peptide DQU53_14135 PF00746 LPXTG cell wall anchor motif DQU53_14150 PF02447 GntP family permease DQU53_14155 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DQU53_14155 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DQU53_14160 PF00392 Bacterial regulatory proteins, gntR family DQU53_14160 PF07729 FCD domain DQU53_14165 PF13411 MerR HTH family regulatory protein DQU53_14170 PF04607 Region found in RelA / SpoT proteins DQU53_14175 PF09954 Uncharacterized protein conserved in bacteria (DUF2188) DQU53_14185 PF07690 Major Facilitator Superfamily DQU53_14190 PF09335 SNARE associated Golgi protein DQU53_14210 PF00005 ABC transporter DQU53_14220 PF06874 Firmicute fructose-1,6-bisphosphatase DQU53_14230 PF01738 Dienelactone hydrolase family DQU53_14235 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DQU53_14240 PF01047 MarR family DQU53_14250 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DQU53_14255 PF00881 Nitroreductase family DQU53_14260 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DQU53_14260 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DQU53_14270 PF00005 ABC transporter DQU53_14280 PF04203 Sortase domain DQU53_14300 PF03313 Serine dehydratase alpha chain DQU53_14305 PF01842 ACT domain DQU53_14305 PF03315 Serine dehydratase beta chain DQU53_14320 PF00892 EamA-like transporter family DQU53_14325 PF00934 PE family DQU53_14325 PF07859 alpha/beta hydrolase fold DQU53_14340 PF02378 Phosphotransferase system, EIIC DQU53_14340 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 DQU53_14340 PF00367 phosphotransferase system, EIIB DQU53_14345 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DQU53_14345 PF00205 Thiamine pyrophosphate enzyme, central domain DQU53_14345 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DQU53_14350 PF04172 LrgB-like family DQU53_14355 PF03788 LrgA family DQU53_14360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DQU53_14360 PF03466 LysR substrate binding domain DQU53_14370 PF05257 CHAP domain DQU53_14375 PF00368 Hydroxymethylglutaryl-coenzyme A reductase DQU53_14380 PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal DQU53_14380 PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal DQU53_14385 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain DQU53_14385 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain DQU53_14390 PF17871 AAA lid domain DQU53_14390 PF10431 C-terminal, D2-small domain, of ClpB protein DQU53_14390 PF00004 ATPase family associated with various cellular activities (AAA) DQU53_14390 PF07724 AAA domain (Cdc48 subfamily) DQU53_14400 PF02421 Ferrous iron transport protein B DQU53_14400 PF07664 Ferrous iron transport protein B C terminus DQU53_14400 PF17910 FeoB cytosolic helical domain DQU53_14400 PF07670 Nucleoside recognition DQU53_14410 PF03176 MMPL family DQU53_14425 PF00171 Aldehyde dehydrogenase family DQU53_14430 PF00132 Bacterial transferase hexapeptide (six repeats) DQU53_14430 PF14602 Hexapeptide repeat of succinyl-transferase DQU53_14430 PF12464 Maltose acetyltransferase DQU53_14440 PF00403 Heavy-metal-associated domain DQU53_14445 PF00403 Heavy-metal-associated domain DQU53_14450 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DQU53_14450 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DQU53_14455 PF00155 Aminotransferase class I and II DQU53_14460 PF01593 Flavin containing amine oxidoreductase DQU53_14470 PF00535 Glycosyl transferase family 2 DQU53_14475 PF01593 Flavin containing amine oxidoreductase DQU53_14490 PF01757 Acyltransferase family DQU53_14500 PF01464 Transglycosylase SLT domain DQU53_14525 PF05979 Bacterial protein of unknown function (DUF896) DQU53_14545 PF00440 Bacterial regulatory proteins, tetR family DQU53_14550 PF00106 short chain dehydrogenase DQU53_14560 PF00561 alpha/beta hydrolase fold DQU53_14565 PF07683 Cobalamin synthesis protein cobW C-terminal domain DQU53_14565 PF02492 CobW/HypB/UreG, nucleotide-binding domain DQU53_14605 PF01180 Dihydroorotate dehydrogenase DQU53_14615 PF02677 Epoxyqueuosine reductase QueH DQU53_14640 PF00089 Trypsin DQU53_14645 PF02261 Aspartate decarboxylase DQU53_14650 PF02569 Pantoate-beta-alanine ligase DQU53_14655 PF02548 Ketopantoate hydroxymethyltransferase DQU53_14660 PF02558 Ketopantoate reductase PanE/ApbA DQU53_14660 PF08546 Ketopantoate reductase PanE/ApbA C terminal DQU53_14665 PF03306 Alpha-acetolactate decarboxylase DQU53_14670 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain DQU53_14670 PF00056 lactate/malate dehydrogenase, NAD binding domain DQU53_14680 PF13520 Amino acid permease DQU53_14685 PF00202 Aminotransferase class-III DQU53_14695 PF00274 Fructose-bisphosphate aldolase class-I DQU53_14700 PF06039 Malate:quinone oxidoreductase (Mqo) DQU53_14710 PF13193 AMP-binding enzyme C-terminal domain DQU53_14710 PF00501 AMP-binding enzyme DQU53_14725 PF05199 GMC oxidoreductase DQU53_14725 PF00732 GMC oxidoreductase DQU53_14745 PF02028 BCCT, betaine/carnitine/choline family transporter DQU53_14765 PF03477 ATP cone domain DQU53_14765 PF13597 Anaerobic ribonucleoside-triphosphate reductase DQU53_14770 PF03600 Citrate transporter DQU53_14780 PF14824 Sirohaem biosynthesis protein central DQU53_14785 PF00258 Flavodoxin DQU53_14785 PF00667 FAD binding domain DQU53_14785 PF00175 Oxidoreductase NAD-binding domain DQU53_14795 PF00255 Glutathione peroxidase DQU53_14820 PF00005 ABC transporter DQU53_14825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DQU53_14830 PF00486 Transcriptional regulatory protein, C terminal DQU53_14830 PF00072 Response regulator receiver domain DQU53_14840 PF00245 Alkaline phosphatase DQU53_14850 PF01047 MarR family DQU53_14860 PF00746 LPXTG cell wall anchor motif DQU53_14860 PF10425 C-terminus of bacterial fibrinogen-binding adhesin DQU53_14860 PF17961 Bacterial Ig domain DQU53_14860 PF04650 YSIRK type signal peptide DQU53_14865 PF00027 Cyclic nucleotide-binding domain DQU53_14865 PF13545 Crp-like helix-turn-helix domain DQU53_14870 PF00696 Amino acid kinase family DQU53_14875 PF13520 Amino acid permease DQU53_14880 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain DQU53_14880 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain DQU53_14895 PF02863 Arginine repressor, C-terminal domain DQU53_14895 PF01316 Arginine repressor, DNA binding domain DQU53_14900 PF01447 Thermolysin metallopeptidase, catalytic domain DQU53_14900 PF03413 Peptidase propeptide and YPEB domain DQU53_14900 PF02868 Thermolysin metallopeptidase, alpha-helical domain DQU53_14900 PF07504 Fungalysin/Thermolysin Propeptide Motif DQU53_14915 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DQU53_14915 PF00874 PRD domain DQU53_14915 PF05043 Mga helix-turn-helix domain DQU53_14915 PF08279 HTH domain DQU53_14920 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DQU53_14920 PF02378 Phosphotransferase system, EIIC DQU53_14920 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DQU53_14925 PF01238 Phosphomannose isomerase type I DQU53_14930 PF01061 ABC-2 type transporter DQU53_14935 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase DQU53_14935 PF05257 CHAP domain DQU53_14940 PF00857 Isochorismatase family DQU53_14940 PF00550 Phosphopantetheine attachment site DQU53_14945 PF01468 GA module DQU53_14955 PF00534 Glycosyl transferases group 1 DQU53_14960 PF01043 SecA preprotein cross-linking domain DQU53_14960 PF07517 SecA DEAD-like domain DQU53_14960 PF07516 SecA Wing and Scaffold domain DQU53_14965 PF15432 Accessory Sec secretory system ASP3 DQU53_14970 PF16929 Accessory Sec system GspB-transporter DQU53_14975 PF16993 Accessory Sec system protein Asp1 DQU53_14980 PF00344 SecY translocase DQU53_14985 PF00746 LPXTG cell wall anchor motif DQU53_14990 PF01613 Flavin reductase like domain DQU53_15010 PF01613 Flavin reductase like domain DQU53_15015 PF01625 Peptide methionine sulfoxide reductase DQU53_15015 PF01641 SelR domain DQU53_15030 PF13614 AAA domain DQU53_15035 PF02706 Chain length determinant protein DQU53_15040 PF00440 Bacterial regulatory proteins, tetR family DQU53_15040 PF18665 Tetracyclin repressor-like, C-terminal domain DQU53_15045 PF00535 Glycosyl transferase family 2 DQU53_15055 PF01522 Polysaccharide deacetylase DQU53_15060 PF01757 Acyltransferase family DQU53_15070 PF04650 YSIRK type signal peptide DQU53_15080 PF01502 Phosphoribosyl-AMP cyclohydrolase DQU53_15080 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase DQU53_15085 PF00977 Histidine biosynthesis protein DQU53_15090 PF00977 Histidine biosynthesis protein DQU53_15095 PF00117 Glutamine amidotransferase class-I DQU53_15100 PF00475 Imidazoleglycerol-phosphate dehydratase DQU53_15105 PF00155 Aminotransferase class I and II DQU53_15110 PF00815 Histidinol dehydrogenase DQU53_15115 PF01634 ATP phosphoribosyltransferase DQU53_15120 PF13393 Histidyl-tRNA synthetase DQU53_15140 PF12558 ATP-binding cassette cobalt transporter DQU53_15140 PF00005 ABC transporter DQU53_15145 PF07155 ECF-type riboflavin transporter, S component DQU53_15155 PF04264 YceI-like domain DQU53_15160 PF08450 SMP-30/Gluconolactonase/LRE-like region DQU53_15170 PF01470 Pyroglutamyl peptidase DQU53_15190 PF00939 Sodium:sulfate symporter transmembrane region DQU53_15195 PF00892 EamA-like transporter family DQU53_15205 PF03824 High-affinity nickel-transport protein DQU53_15210 PF00797 N-acetyltransferase DQU53_15220 PF00005 ABC transporter DQU53_15225 PF02687 FtsX-like permease family DQU53_15235 PF00313 'Cold-shock' DNA-binding domain DQU53_15255 PF02195 ParB-like nuclease domain DQU53_15255 PF17762 HTH domain found in ParB protein DQU53_15260 PF02527 rRNA small subunit methyltransferase G DQU53_15265 PF13932 GidA associated domain DQU53_15265 PF01134 Glucose inhibited division protein A DQU53_15270 PF10396 GTP-binding protein TrmE N-terminus DQU53_15270 PF01926 50S ribosome-binding GTPase DQU53_15270 PF12631 MnmE helical domain DQU53_15275 PF00825 Ribonuclease P DQU53_15280 PF00468 Ribosomal protein L34 DQU53_15305 PF13610 DDE domain DQU53_15310 PF07827 KNTase C-terminal domain DQU53_15315 PF01446 Replication protein DQU53_15320 PF13610 DDE domain DQU53_15360 PF05257 CHAP domain DQU53_15360 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase DQU53_15370 PF01751 Toprim domain DQU53_15370 PF01131 DNA topoisomerase DQU53_15390 PF00436 Single-strand binding protein family DQU53_15395 PF13610 DDE domain DQU53_15400 PF00893 Small Multidrug Resistance protein DQU53_15405 PF13610 DDE domain DQU53_15415 PF00133 tRNA synthetases class I (I, L, M and V) DQU53_15415 PF08264 Anticodon-binding domain of tRNA DQU53_15425 PF13610 DDE domain DQU53_15435 PF00583 Acetyltransferase (GNAT) family DQU53_15440 PF01636 Phosphotransferase enzyme family DQU53_15450 PF13610 DDE domain DQU53_15460 PF13610 DDE domain DQU53_15480 PF00239 Resolvase, N terminal domain DQU53_15480 PF02796 Helix-turn-helix domain of resolvase