locus-tag class description DQU96_00005 PF08299 Bacterial dnaA protein helix-turn-helix DQU96_00005 PF00308 Bacterial dnaA protein DQU96_00005 PF11638 DnaA N-terminal domain DQU96_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain DQU96_00010 PF02767 DNA polymerase III beta subunit, central domain DQU96_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain DQU96_00020 PF02463 RecF/RecN/SMC N terminal domain DQU96_00025 PF01751 Toprim domain DQU96_00025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DQU96_00025 PF00204 DNA gyrase B DQU96_00025 PF00986 DNA gyrase B subunit, carboxyl terminus DQU96_00030 PF00521 DNA gyrase/topoisomerase IV, subunit A DQU96_00030 PF03989 DNA gyrase C-terminal domain, beta-propeller DQU96_00035 PF01256 Carbohydrate kinase DQU96_00040 PF00221 Aromatic amino acid lyase DQU96_00050 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DQU96_00050 PF02403 Seryl-tRNA synthetase N-terminal domain DQU96_00065 PF00561 alpha/beta hydrolase fold DQU96_00075 PF01368 DHH family DQU96_00075 PF02272 DHHA1 domain DQU96_00080 PF01281 Ribosomal protein L9, N-terminal domain DQU96_00080 PF03948 Ribosomal protein L9, C-terminal domain DQU96_00085 PF03796 DnaB-like helicase C terminal domain DQU96_00085 PF00772 DnaB-like helicase N terminal domain DQU96_00095 PF00709 Adenylosuccinate synthetase DQU96_00110 PF00486 Transcriptional regulatory protein, C terminal DQU96_00110 PF00072 Response regulator receiver domain DQU96_00115 PF00512 His Kinase A (phospho-acceptor) domain DQU96_00115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DQU96_00115 PF00672 HAMP domain DQU96_00115 PF13426 PAS domain DQU96_00120 PF07435 YycH protein DQU96_00130 PF00753 Metallo-beta-lactamase superfamily DQU96_00135 PF02872 5'-nucleotidase, C-terminal domain DQU96_00135 PF00149 Calcineurin-like phosphoesterase DQU96_00140 PF02590 Predicted SPOUT methyltransferase DQU96_00165 PF13610 DDE domain DQU96_00185 PF16916 Dimerisation domain of Zinc Transporter DQU96_00185 PF01545 Cation efflux family DQU96_00190 PF01022 Bacterial regulatory protein, arsR family DQU96_00205 PF01381 Helix-turn-helix DQU96_00220 PF08722 TnsA endonuclease N terminal DQU96_00220 PF08721 TnsA endonuclease C terminal DQU96_00225 PF00665 Integrase core domain DQU96_00230 PF11426 Tn7 transposition regulator TnsC DQU96_00230 PF13401 AAA domain DQU96_00240 PF18623 TnsE C-terminal domain DQU96_00245 PF02655 ATP-grasp domain DQU96_00245 PF18419 ATP-grasp-like domain DQU96_00245 PF04262 Glutamate-cysteine ligase DQU96_00250 PF00756 Putative esterase DQU96_00255 PF01638 HxlR-like helix-turn-helix DQU96_00260 PF00107 Zinc-binding dehydrogenase DQU96_00260 PF08240 Alcohol dehydrogenase GroES-like domain DQU96_00265 PF04828 Glutathione-dependent formaldehyde-activating enzyme DQU96_00300 PF00106 short chain dehydrogenase DQU96_00320 PF13610 DDE domain DQU96_00325 PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal DQU96_00325 PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal DQU96_00335 PF03009 Glycerophosphoryl diester phosphodiesterase family DQU96_00340 PF01575 MaoC like domain DQU96_00345 PF00905 Penicillin binding protein transpeptidase domain DQU96_00345 PF05223 NTF2-like N-terminal transpeptidase domain DQU96_00345 PF03717 Penicillin-binding Protein dimerisation domain DQU96_00350 PF05569 BlaR1 peptidase M56 DQU96_00350 PF00905 Penicillin binding protein transpeptidase domain DQU96_00410 PF03829 PTS system glucitol/sorbitol-specific IIA component DQU96_00415 PF07663 Sorbitol phosphotransferase enzyme II C-terminus DQU96_00415 PF03612 Sorbitol phosphotransferase enzyme II N-terminus DQU96_00420 PF03608 PTS system enzyme II sorbitol-specific factor DQU96_00435 PF00106 short chain dehydrogenase DQU96_00470 PF01925 Sulfite exporter TauE/SafE DQU96_00475 PF02583 Metal-sensitive transcriptional repressor DQU96_00480 PF13686 DsrE/DsrF/DrsH-like family DQU96_00485 PF00753 Metallo-beta-lactamase superfamily DQU96_00505 PF01207 Dihydrouridine synthase (Dus) DQU96_00540 PF00388 Phosphatidylinositol-specific phospholipase C, X domain DQU96_00545 PF04507 Csa1 family DQU96_00550 PF04507 Csa1 family DQU96_00555 PF04507 Csa1 family DQU96_00560 PF04507 Csa1 family DQU96_00565 PF04507 Csa1 family DQU96_00570 PF12833 Helix-turn-helix domain DQU96_00575 PF07687 Peptidase dimerisation domain DQU96_00575 PF01546 Peptidase family M20/M25/M40 DQU96_00580 PF07690 Major Facilitator Superfamily DQU96_00585 PF02690 Na+/Pi-cotransporter DQU96_00590 PF06100 MCRA family DQU96_00595 PF00892 EamA-like transporter family DQU96_00610 PF02652 L-lactate permease DQU96_00615 PF03373 Octapeptide repeat DQU96_00615 PF00746 LPXTG cell wall anchor motif DQU96_00615 PF02216 B domain DQU96_00615 PF04650 YSIRK type signal peptide DQU96_00615 PF01476 LysM domain DQU96_00630 PF01032 FecCD transport family DQU96_00635 PF01032 FecCD transport family DQU96_00640 PF01497 Periplasmic binding protein DQU96_00645 PF00291 Pyridoxal-phosphate dependent enzyme DQU96_00650 PF02423 Ornithine cyclodeaminase/mu-crystallin family DQU96_00655 PF06276 Ferric iron reductase FhuF-like transporter DQU96_00655 PF04183 IucA / IucC family DQU96_00660 PF07690 Major Facilitator Superfamily DQU96_00660 PF00083 Sugar (and other) transporter DQU96_00665 PF06276 Ferric iron reductase FhuF-like transporter DQU96_00665 PF04183 IucA / IucC family DQU96_00670 PF06276 Ferric iron reductase FhuF-like transporter DQU96_00670 PF04183 IucA / IucC family DQU96_00675 PF03328 HpcH/HpaI aldolase/citrate lyase family DQU96_00680 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain DQU96_00680 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain DQU96_00685 PF02195 ParB-like nuclease domain DQU96_00710 PF01370 NAD dependent epimerase/dehydratase family DQU96_00715 PF02397 Bacterial sugar transferase DQU96_00720 PF00534 Glycosyl transferases group 1 DQU96_00735 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain DQU96_00735 PF02777 Iron/manganese superoxide dismutases, C-terminal domain DQU96_00745 PF00392 Bacterial regulatory proteins, gntR family DQU96_00745 PF07702 UTRA domain DQU96_00755 PF01048 Phosphorylase superfamily DQU96_00760 PF07690 Major Facilitator Superfamily DQU96_00765 PF01791 DeoC/LacD family aldolase DQU96_00770 PF01676 Metalloenzyme superfamily DQU96_00775 PF00528 Binding-protein-dependent transport system inner membrane component DQU96_00780 PF00528 Binding-protein-dependent transport system inner membrane component DQU96_00785 PF00005 ABC transporter DQU96_00800 PF00149 Calcineurin-like phosphoesterase DQU96_00800 PF02872 5'-nucleotidase, C-terminal domain DQU96_00815 PF00465 Iron-containing alcohol dehydrogenase DQU96_00815 PF00171 Aldehyde dehydrogenase family DQU96_00820 PF02706 Chain length determinant protein DQU96_00825 PF13614 AAA domain DQU96_00835 PF02719 Polysaccharide biosynthesis protein DQU96_00840 PF08485 Polysaccharide biosynthesis protein C-terminal DQU96_00840 PF02719 Polysaccharide biosynthesis protein DQU96_00845 PF01370 NAD dependent epimerase/dehydratase family DQU96_00850 PF02350 UDP-N-acetylglucosamine 2-epimerase DQU96_00855 PF00132 Bacterial transferase hexapeptide (six repeats) DQU96_00880 PF02397 Bacterial sugar transferase DQU96_00890 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain DQU96_00890 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain DQU96_00890 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain DQU96_00895 PF02350 UDP-N-acetylglucosamine 2-epimerase DQU96_00900 PF03992 Antibiotic biosynthesis monooxygenase DQU96_00905 PF04304 Protein of unknown function (DUF454) DQU96_00910 PF00171 Aldehyde dehydrogenase family DQU96_00915 PF16916 Dimerisation domain of Zinc Transporter DQU96_00915 PF01545 Cation efflux family DQU96_00930 PF00005 ABC transporter DQU96_00940 PF00528 Binding-protein-dependent transport system inner membrane component DQU96_00945 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DQU96_00945 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DQU96_00945 PF02770 Acyl-CoA dehydrogenase, middle domain DQU96_00950 PF10057 Uncharacterized conserved protein (DUF2294) DQU96_00955 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DQU96_00955 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DQU96_00965 PF13193 AMP-binding enzyme C-terminal domain DQU96_00965 PF00668 Condensation domain DQU96_00965 PF00550 Phosphopantetheine attachment site DQU96_00965 PF00501 AMP-binding enzyme DQU96_00965 PF00975 Thioesterase domain DQU96_00980 PF00696 Amino acid kinase family DQU96_00985 PF01960 ArgJ family DQU96_00990 PF02774 Semialdehyde dehydrogenase, dimerisation domain DQU96_00990 PF01118 Semialdehyde dehydrogenase, NAD binding domain DQU96_00995 PF00202 Aminotransferase class-III DQU96_01000 PF05525 Branched-chain amino acid transport protein DQU96_01005 PF00857 Isochorismatase family DQU96_01010 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DQU96_01010 PF00205 Thiamine pyrophosphate enzyme, central domain DQU96_01010 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DQU96_01020 PF02378 Phosphotransferase system, EIIC DQU96_01020 PF00367 phosphotransferase system, EIIB DQU96_01020 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 DQU96_01035 PF02378 Phosphotransferase system, EIIC DQU96_01035 PF00367 phosphotransferase system, EIIB DQU96_01040 PF01380 SIS domain DQU96_01040 PF01418 Helix-turn-helix domain, rpiR family DQU96_01050 PF18766 SWI2/SNF2 ATPase DQU96_01050 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) DQU96_01050 PF12008 Type I restriction and modification enzyme - subunit R C terminal DQU96_01065 PF00005 ABC transporter DQU96_01070 PF02687 FtsX-like permease family DQU96_01070 PF12704 MacB-like periplasmic core domain DQU96_01070 PF00005 ABC transporter DQU96_01090 PF00005 ABC transporter DQU96_01100 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DQU96_01100 PF00005 ABC transporter DQU96_01110 PF00528 Binding-protein-dependent transport system inner membrane component DQU96_01110 PF12911 N-terminal TM domain of oligopeptide transport permease C DQU96_01125 PF04507 Csa1 family DQU96_01130 PF02525 Flavodoxin-like fold DQU96_01135 PF08460 Bacterial SH3 domain DQU96_01135 PF01551 Peptidase family M23 DQU96_01140 PF00005 ABC transporter DQU96_01140 PF03459 TOBE domain DQU96_01140 PF17912 MalK OB fold domain DQU96_01150 PF00528 Binding-protein-dependent transport system inner membrane component DQU96_01155 PF00528 Binding-protein-dependent transport system inner membrane component DQU96_01160 PF02894 Oxidoreductase family, C-terminal alpha/beta domain DQU96_01160 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DQU96_01165 PF02894 Oxidoreductase family, C-terminal alpha/beta domain DQU96_01165 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DQU96_01175 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family DQU96_01180 PF07690 Major Facilitator Superfamily DQU96_01200 PF02901 Pyruvate formate lyase-like DQU96_01200 PF01228 Glycine radical DQU96_01205 PF04055 Radical SAM superfamily DQU96_01220 PF04022 Staphylocoagulase repeat DQU96_01220 PF08764 Staphylococcus aureus coagulase DQU96_01230 PF00108 Thiolase, N-terminal domain DQU96_01230 PF02803 Thiolase, C-terminal domain DQU96_01235 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DQU96_01235 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain DQU96_01240 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DQU96_01240 PF02770 Acyl-CoA dehydrogenase, middle domain DQU96_01240 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DQU96_01245 PF13193 AMP-binding enzyme C-terminal domain DQU96_01245 PF00501 AMP-binding enzyme DQU96_01250 PF01144 Coenzyme A transferase DQU96_01260 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DQU96_01265 PF04343 Protein of unknown function, DUF488 DQU96_01280 PF00970 Oxidoreductase FAD-binding domain DQU96_01280 PF00042 Globin DQU96_01280 PF00175 Oxidoreductase NAD-binding domain DQU96_01290 PF00056 lactate/malate dehydrogenase, NAD binding domain DQU96_01290 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain DQU96_01300 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 DQU96_01300 PF00367 phosphotransferase system, EIIB DQU96_01300 PF02378 Phosphotransferase system, EIIC DQU96_01305 PF01156 Inosine-uridine preferring nucleoside hydrolase DQU96_01325 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DQU96_01330 PF03611 PTS system sugar-specific permease component DQU96_01335 PF00107 Zinc-binding dehydrogenase DQU96_01335 PF08240 Alcohol dehydrogenase GroES-like domain DQU96_01345 PF00107 Zinc-binding dehydrogenase DQU96_01345 PF08240 Alcohol dehydrogenase GroES-like domain DQU96_01350 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase DQU96_01355 PF08240 Alcohol dehydrogenase GroES-like domain DQU96_01355 PF00107 Zinc-binding dehydrogenase DQU96_01360 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase DQU96_01365 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase DQU96_01370 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase DQU96_01375 PF08240 Alcohol dehydrogenase GroES-like domain DQU96_01375 PF00107 Zinc-binding dehydrogenase DQU96_01380 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase DQU96_01385 PF00535 Glycosyl transferase family 2 DQU96_01385 PF18674 TarS beta-glycosyltransferase C-terminal domain 1 DQU96_01390 PF04405 Domain of Unknown function (DUF542) DQU96_01390 PF01814 Hemerythrin HHE cation binding domain DQU96_01395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DQU96_01395 PF06580 Histidine kinase DQU96_01395 PF07694 5TMR of 5TMR-LYT DQU96_01400 PF00072 Response regulator receiver domain DQU96_01400 PF04397 LytTr DNA-binding domain DQU96_01405 PF03788 LrgA family DQU96_01410 PF04172 LrgB-like family DQU96_01415 PF00155 Aminotransferase class I and II DQU96_01415 PF00392 Bacterial regulatory proteins, gntR family DQU96_01425 PF02378 Phosphotransferase system, EIIC DQU96_01425 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 DQU96_01425 PF00367 phosphotransferase system, EIIB DQU96_01430 PF00232 Glycosyl hydrolase family 1 DQU96_01440 PF13649 Methyltransferase domain DQU96_01450 PF00294 pfkB family carbohydrate kinase DQU96_01450 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) DQU96_01455 PF05025 RbsD / FucU transport protein family DQU96_01460 PF06800 Sugar transport protein DQU96_01465 PF00356 Bacterial regulatory proteins, lacI family DQU96_01465 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family DQU96_01480 PF07690 Major Facilitator Superfamily DQU96_01485 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family DQU96_01490 PF01551 Peptidase family M23 DQU96_01495 PF00005 ABC transporter DQU96_01515 PF05257 CHAP domain DQU96_01515 PF01476 LysM domain DQU96_01520 PF06013 Proteins of 100 residues with WXG DQU96_01530 PF10661 WXG100 protein secretion system (Wss), protein EssA DQU96_01535 PF08817 WXG100 protein secretion system (Wss), protein YukD DQU96_01540 PF10140 WXG100 protein secretion system (Wss), protein YukC DQU96_01545 PF12538 DNA transporter DQU96_01545 PF01580 FtsK/SpoIIIE family DQU96_01555 PF06013 Proteins of 100 residues with WXG DQU96_01570 PF14449 Pre-toxin TG DQU96_01630 PF05525 Branched-chain amino acid transport protein DQU96_01640 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) DQU96_01650 PF02687 FtsX-like permease family DQU96_01655 PF00005 ABC transporter DQU96_01675 PF04227 Indigoidine synthase A like protein DQU96_01680 PF01773 Na+ dependent nucleoside transporter N-terminus DQU96_01680 PF07662 Na+ dependent nucleoside transporter C-terminus DQU96_01685 PF00474 Sodium:solute symporter family DQU96_01690 PF00701 Dihydrodipicolinate synthetase family DQU96_01695 PF00480 ROK family DQU96_01700 PF01380 SIS domain DQU96_01700 PF01418 Helix-turn-helix domain, rpiR family DQU96_01705 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase DQU96_01715 PF04650 YSIRK type signal peptide DQU96_01720 PF14659 Phage integrase, N-terminal SAM-like domain DQU96_01720 PF00589 Phage integrase family DQU96_01805 PF00436 Single-strand binding protein family DQU96_01975 PF13457 GW (Gly-Tryp) dipeptide domain DQU96_01975 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase DQU96_01995 PF01510 N-acetylmuramoyl-L-alanine amidase DQU96_01995 PF08460 Bacterial SH3 domain DQU96_01995 PF05257 CHAP domain DQU96_02010 PF04650 YSIRK type signal peptide DQU96_02020 PF00724 NADH:flavin oxidoreductase / NADH oxidase family DQU96_02030 PF00296 Luciferase-like monooxygenase DQU96_02035 PF01597 Glycine cleavage H-protein DQU96_02040 PF01661 Macro domain DQU96_02050 PF10437 Bacterial lipoate protein ligase C-terminus DQU96_02050 PF03099 Biotin/lipoate A/B protein ligase family DQU96_02055 PF16363 GDP-mannose 4,6 dehydratase DQU96_02060 PF03611 PTS system sugar-specific permease component DQU96_02070 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DQU96_02075 PF00874 PRD domain DQU96_02075 PF03123 CAT RNA binding domain DQU96_02090 PF01554 MatE DQU96_02100 PF07690 Major Facilitator Superfamily DQU96_02105 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DQU96_02110 PF00296 Luciferase-like monooxygenase DQU96_02115 PF03358 NADPH-dependent FMN reductase DQU96_02120 PF03601 Conserved hypothetical protein 698 DQU96_02130 PF13302 Acetyltransferase (GNAT) domain DQU96_02135 PF09375 Imelysin DQU96_02140 PF04261 Dyp-type peroxidase family DQU96_02145 PF03239 Iron permease FTR1 family DQU96_02150 PF00902 Sec-independent protein translocase protein (TatC) DQU96_02155 PF02416 mttA/Hcf106 family DQU96_02165 PF01381 Helix-turn-helix DQU96_02190 PF02803 Thiolase, C-terminal domain DQU96_02190 PF00108 Thiolase, N-terminal domain DQU96_02200 PF01717 Cobalamin-independent synthase, Catalytic domain DQU96_02200 PF08267 Cobalamin-independent synthase, N-terminal domain DQU96_02205 PF02574 Homocysteine S-methyltransferase DQU96_02205 PF02219 Methylenetetrahydrofolate reductase DQU96_02210 PF01053 Cys/Met metabolism PLP-dependent enzyme DQU96_02215 PF01053 Cys/Met metabolism PLP-dependent enzyme DQU96_02225 PF02195 ParB-like nuclease domain DQU96_02225 PF17762 HTH domain found in ParB protein DQU96_02230 PF00924 Mechanosensitive ion channel DQU96_02235 PF06107 Bacterial protein of unknown function (DUF951) DQU96_02240 PF06071 Protein of unknown function (DUF933) DQU96_02240 PF01926 50S ribosome-binding GTPase DQU96_02255 PF01250 Ribosomal protein S6 DQU96_02260 PF00436 Single-strand binding protein family DQU96_02265 PF01084 Ribosomal protein S18 DQU96_02340 PF07992 Pyridine nucleotide-disulphide oxidoreductase DQU96_02340 PF13192 Thioredoxin domain DQU96_02345 PF10417 C-terminal domain of 1-Cys peroxiredoxin DQU96_02345 PF00578 AhpC/TSA family DQU96_02350 PF00881 Nitroreductase family DQU96_02355 PF00375 Sodium:dicarboxylate symporter family DQU96_02380 PF11181 Heat induced stress protein YflT DQU96_02390 PF00860 Permease family DQU96_02395 PF00571 CBS domain DQU96_02395 PF00478 IMP dehydrogenase / GMP reductase domain DQU96_02400 PF00117 Glutamine amidotransferase class-I DQU96_02400 PF00958 GMP synthase C terminal domain DQU96_02430 PF06993 Protein of unknown function (DUF1304) DQU96_02440 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain DQU96_02440 PF09199 Staphylococcal superantigen-like OB-fold domain DQU96_02445 PF09199 Staphylococcal superantigen-like OB-fold domain DQU96_02445 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain DQU96_02450 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain DQU96_02450 PF09199 Staphylococcal superantigen-like OB-fold domain DQU96_02460 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain DQU96_02460 PF09199 Staphylococcal superantigen-like OB-fold domain DQU96_02465 PF09199 Staphylococcal superantigen-like OB-fold domain DQU96_02465 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain DQU96_02470 PF09199 Staphylococcal superantigen-like OB-fold domain DQU96_02470 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain DQU96_02475 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain DQU96_02475 PF09199 Staphylococcal superantigen-like OB-fold domain DQU96_02480 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain DQU96_02480 PF09199 Staphylococcal superantigen-like OB-fold domain DQU96_02485 PF09199 Staphylococcal superantigen-like OB-fold domain DQU96_02485 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain DQU96_02495 PF02384 N-6 DNA Methylase DQU96_02495 PF12161 HsdM N-terminal domain DQU96_02505 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain DQU96_02505 PF09199 Staphylococcal superantigen-like OB-fold domain DQU96_02520 PF04507 Csa1 family DQU96_02525 PF04507 Csa1 family DQU96_02530 PF04507 Csa1 family DQU96_02535 PF04507 Csa1 family DQU96_02540 PF04507 Csa1 family DQU96_02545 PF04507 Csa1 family DQU96_02550 PF04507 Csa1 family DQU96_02555 PF04507 Csa1 family DQU96_02560 PF04507 Csa1 family DQU96_02565 PF04507 Csa1 family DQU96_02590 PF02492 CobW/HypB/UreG, nucleotide-binding domain DQU96_02590 PF07683 Cobalamin synthesis protein cobW C-terminal domain DQU96_02595 PF17063 Phenol-soluble modulin alpha 4 peptide DQU96_02615 PF00361 Proton-conducting membrane transporter DQU96_02615 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus DQU96_02620 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) DQU96_02625 PF10057 Uncharacterized conserved protein (DUF2294) DQU96_02640 PF12146 Serine aminopeptidase, S33 DQU96_02645 PF00209 Sodium:neurotransmitter symporter family DQU96_02650 PF00291 Pyridoxal-phosphate dependent enzyme DQU96_02655 PF01053 Cys/Met metabolism PLP-dependent enzyme DQU96_02660 PF09383 NIL domain DQU96_02660 PF00005 ABC transporter DQU96_02665 PF00528 Binding-protein-dependent transport system inner membrane component DQU96_02670 PF03180 NLPA lipoprotein DQU96_02675 PF05257 CHAP domain DQU96_02675 PF01476 LysM domain DQU96_02705 PF03466 LysR substrate binding domain DQU96_02705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DQU96_02710 PF00310 Glutamine amidotransferases class-II DQU96_02710 PF04898 Glutamate synthase central domain DQU96_02710 PF01645 Conserved region in glutamate synthase DQU96_02710 PF01493 GXGXG motif DQU96_02715 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster DQU96_02715 PF07992 Pyridine nucleotide-disulphide oxidoreductase DQU96_02725 PF02378 Phosphotransferase system, EIIC DQU96_02725 PF00367 phosphotransferase system, EIIB DQU96_02730 PF00128 Alpha amylase, catalytic domain DQU96_02730 PF16657 Maltogenic Amylase, C-terminal domain DQU96_02735 PF07702 UTRA domain DQU96_02735 PF00392 Bacterial regulatory proteins, gntR family DQU96_02755 PF12169 DNA polymerase III subunits gamma and tau domain III DQU96_02760 PF02575 YbaB/EbfC DNA-binding family DQU96_02765 PF13662 Toprim domain DQU96_02765 PF02132 RecR protein DQU96_02795 PF01276 Orn/Lys/Arg decarboxylase, major domain DQU96_02795 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain DQU96_02800 PF02223 Thymidylate kinase DQU96_02805 PF06153 Cyclic-di-AMP receptor DQU96_02810 PF09115 DNA polymerase III, delta subunit, C terminal DQU96_02815 PF04468 PSP1 C-terminal conserved region DQU96_02820 PF06156 Initiation control protein YabA DQU96_02825 PF05175 Methyltransferase small domain DQU96_02830 PF01541 GIY-YIG catalytic domain DQU96_02835 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DQU96_02840 PF09334 tRNA synthetases class I (M) DQU96_02840 PF01588 Putative tRNA binding domain DQU96_02840 PF08264 Anticodon-binding domain of tRNA DQU96_02845 PF01026 TatD related DNase DQU96_02850 PF13331 Domain of unknown function (DUF4093) DQU96_02850 PF01751 Toprim domain DQU96_02855 PF00398 Ribosomal RNA adenine dimethylase DQU96_02860 PF06257 Biofilm formation stimulator VEG DQU96_02865 PF00288 GHMP kinases N terminal domain DQU96_02865 PF08544 GHMP kinases C terminal DQU96_02870 PF09182 Bacterial purine repressor, N-terminal DQU96_02870 PF00156 Phosphoribosyl transferase domain DQU96_02875 PF01042 Endoribonuclease L-PSP DQU96_02880 PF04026 SpoVG DQU96_02890 PF00132 Bacterial transferase hexapeptide (six repeats) DQU96_02890 PF00483 Nucleotidyl transferase DQU96_02895 PF14572 Phosphoribosyl synthetase-associated domain DQU96_02895 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase DQU96_02905 PF01386 Ribosomal L25p family DQU96_02905 PF14693 Ribosomal protein TL5, C-terminal domain DQU96_02910 PF01195 Peptidyl-tRNA hydrolase DQU96_02915 PF02559 CarD-like/TRCF domain DQU96_02915 PF00270 DEAD/DEAH box helicase DQU96_02915 PF00271 Helicase conserved C-terminal domain DQU96_02915 PF03461 TRCF domain DQU96_02915 PF17757 UvrB interaction domain DQU96_02920 PF01943 Polysaccharide biosynthesis protein DQU96_02920 PF14667 Polysaccharide biosynthesis C-terminal domain DQU96_02925 PF03819 MazG nucleotide pyrophosphohydrolase domain DQU96_02925 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DQU96_02930 PF01479 S4 domain DQU96_02940 PF00575 S1 RNA binding domain DQU96_02945 PF01171 PP-loop family DQU96_02945 PF11734 TilS substrate C-terminal domain DQU96_02955 PF00004 ATPase family associated with various cellular activities (AAA) DQU96_02955 PF01434 Peptidase family M41 DQU96_02955 PF06480 FtsH Extracellular DQU96_02955 PF17862 AAA+ lid domain DQU96_02960 PF01430 Hsp33 protein DQU96_02965 PF00291 Pyridoxal-phosphate dependent enzyme DQU96_02970 PF00809 Pterin binding enzyme DQU96_02975 PF02152 Dihydroneopterin aldolase DQU96_02980 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) DQU96_02990 PF00152 tRNA synthetases class II (D, K and N) DQU96_02990 PF01336 OB-fold nucleic acid binding domain DQU96_03075 PF00155 Aminotransferase class I and II DQU96_03075 PF00392 Bacterial regulatory proteins, gntR family DQU96_03080 PF01680 SOR/SNZ family DQU96_03085 PF01174 SNO glutamine amidotransferase family DQU96_03090 PF01773 Na+ dependent nucleoside transporter N-terminus DQU96_03090 PF07662 Na+ dependent nucleoside transporter C-terminus DQU96_03095 PF05848 CtsR N-terminal HTH domain DQU96_03095 PF17727 CtsR C-terminal dimerization domain DQU96_03100 PF02151 UvrB/uvrC motif DQU96_03105 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain DQU96_03110 PF17871 AAA lid domain DQU96_03110 PF02861 Clp amino terminal domain, pathogenicity island component DQU96_03110 PF00004 ATPase family associated with various cellular activities (AAA) DQU96_03110 PF10431 C-terminal, D2-small domain, of ClpB protein DQU96_03110 PF07724 AAA domain (Cdc48 subfamily) DQU96_03115 PF18073 Rubredoxin metal binding domain DQU96_03125 PF00749 tRNA synthetases class I (E and Q), catalytic domain DQU96_03135 PF00132 Bacterial transferase hexapeptide (six repeats) DQU96_03140 PF01406 tRNA synthetases class I (C) catalytic domain DQU96_03140 PF09190 DALR domain DQU96_03145 PF00636 Ribonuclease III domain DQU96_03150 PF08032 RNA 2'-O ribose methyltransferase substrate binding DQU96_03150 PF00588 SpoU rRNA Methylase family DQU96_03165 PF00471 Ribosomal protein L33 DQU96_03170 PF00584 SecE/Sec61-gamma subunits of protein translocation complex DQU96_03175 PF00467 KOW motif DQU96_03175 PF02357 Transcription termination factor nusG DQU96_03180 PF03946 Ribosomal protein L11, N-terminal domain DQU96_03180 PF00298 Ribosomal protein L11, RNA binding domain DQU96_03185 PF00687 Ribosomal protein L1p/L10e family DQU96_03195 PF00466 Ribosomal protein L10 DQU96_03200 PF16320 Ribosomal protein L7/L12 dimerisation domain DQU96_03200 PF00542 Ribosomal protein L7/L12 C-terminal domain DQU96_03205 PF05175 Methyltransferase small domain DQU96_03210 PF10385 RNA polymerase beta subunit external 1 domain DQU96_03210 PF00562 RNA polymerase Rpb2, domain 6 DQU96_03210 PF04565 RNA polymerase Rpb2, domain 3 DQU96_03210 PF04561 RNA polymerase Rpb2, domain 2 DQU96_03210 PF04560 RNA polymerase Rpb2, domain 7 DQU96_03210 PF04563 RNA polymerase beta subunit DQU96_03215 PF04997 RNA polymerase Rpb1, domain 1 DQU96_03215 PF04998 RNA polymerase Rpb1, domain 5 DQU96_03215 PF05000 RNA polymerase Rpb1, domain 4 DQU96_03215 PF04983 RNA polymerase Rpb1, domain 3 DQU96_03215 PF00623 RNA polymerase Rpb1, domain 2 DQU96_03220 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family DQU96_03225 PF00164 Ribosomal protein S12/S23 DQU96_03230 PF00177 Ribosomal protein S7p/S5e DQU96_03235 PF00009 Elongation factor Tu GTP binding domain DQU96_03235 PF14492 Elongation Factor G, domain II DQU96_03235 PF03144 Elongation factor Tu domain 2 DQU96_03235 PF03764 Elongation factor G, domain IV DQU96_03235 PF00679 Elongation factor G C-terminus DQU96_03240 PF03143 Elongation factor Tu C-terminal domain DQU96_03240 PF03144 Elongation factor Tu domain 2 DQU96_03240 PF00009 Elongation factor Tu GTP binding domain DQU96_03245 PF01546 Peptidase family M20/M25/M40 DQU96_03245 PF07687 Peptidase dimerisation domain DQU96_03250 PF00155 Aminotransferase class I and II DQU96_03255 PF01965 DJ-1/PfpI family DQU96_03260 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DQU96_03260 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DQU96_03265 PF01370 NAD dependent epimerase/dehydratase family DQU96_03270 PF01063 Amino-transferase class IV DQU96_03280 PF01712 Deoxynucleoside kinase DQU96_03285 PF01712 Deoxynucleoside kinase DQU96_03290 PF14437 MafB19-like deaminase DQU96_03300 PF03358 NADPH-dependent FMN reductase DQU96_03305 PF10425 C-terminus of bacterial fibrinogen-binding adhesin DQU96_03305 PF17210 SdrD B-like domain DQU96_03305 PF00746 LPXTG cell wall anchor motif DQU96_03305 PF17961 Bacterial Ig domain DQU96_03305 PF04650 YSIRK type signal peptide DQU96_03310 PF04650 YSIRK type signal peptide DQU96_03310 PF00746 LPXTG cell wall anchor motif DQU96_03310 PF17961 Bacterial Ig domain DQU96_03310 PF10425 C-terminus of bacterial fibrinogen-binding adhesin DQU96_03310 PF17210 SdrD B-like domain DQU96_03315 PF00534 Glycosyl transferases group 1 DQU96_03325 PF02649 Type I GTP cyclohydrolase folE2 DQU96_03330 PF02585 GlcNAc-PI de-N-acetylase DQU96_03340 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase DQU96_03345 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family DQU96_03350 PF01380 SIS domain DQU96_03360 PF07690 Major Facilitator Superfamily DQU96_03370 PF13193 AMP-binding enzyme C-terminal domain DQU96_03370 PF00501 AMP-binding enzyme DQU96_03375 PF02803 Thiolase, C-terminal domain DQU96_03375 PF00108 Thiolase, N-terminal domain DQU96_03390 PF17412 Family of unknown function DQU96_03395 PF08543 Phosphomethylpyrimidine kinase DQU96_03400 PF03167 Uracil DNA glycosylase superfamily DQU96_03410 PF04241 Protein of unknown function (DUF423) DQU96_03440 PF01515 Phosphate acetyl/butaryl transferase DQU96_03445 PF03099 Biotin/lipoate A/B protein ligase family DQU96_03450 PF08544 GHMP kinases C terminal DQU96_03450 PF00288 GHMP kinases N terminal domain DQU96_03460 PF08544 GHMP kinases C terminal DQU96_03460 PF00288 GHMP kinases N terminal domain DQU96_03465 PF07293 Protein of unknown function (DUF1450) DQU96_03470 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DQU96_03470 PF07992 Pyridine nucleotide-disulphide oxidoreductase DQU96_03505 PF00248 Aldo/keto reductase family DQU96_03515 PF03358 NADPH-dependent FMN reductase DQU96_03525 PF01966 HD domain DQU96_03530 PF08741 YwhD family DQU96_03535 PF08240 Alcohol dehydrogenase GroES-like domain DQU96_03535 PF00107 Zinc-binding dehydrogenase DQU96_03550 PF00750 tRNA synthetases class I (R) DQU96_03550 PF03485 Arginyl tRNA synthetase N terminal domain DQU96_03550 PF05746 DALR anticodon binding domain DQU96_03560 PF01497 Periplasmic binding protein DQU96_03565 PF01032 FecCD transport family DQU96_03570 PF13419 Haloacid dehalogenase-like hydrolase DQU96_03575 PF00561 alpha/beta hydrolase fold DQU96_03615 PF00589 Phage integrase family DQU96_03620 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus DQU96_03620 PF00361 Proton-conducting membrane transporter DQU96_03620 PF13244 Domain of unknown function (DUF4040) DQU96_03625 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter DQU96_03630 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L DQU96_03635 PF00361 Proton-conducting membrane transporter DQU96_03640 PF01899 Na+/H+ ion antiporter subunit DQU96_03645 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) DQU96_03650 PF03334 Na+/H+ antiporter subunit DQU96_03655 PF00999 Sodium/hydrogen exchanger family DQU96_03670 PF01297 Zinc-uptake complex component A periplasmic DQU96_03675 PF00950 ABC 3 transport family DQU96_03680 PF00005 ABC transporter DQU96_03685 PF18357 Diphteria toxin repressor SH3 domain DQU96_03685 PF02742 Iron dependent repressor, metal binding and dimerisation domain DQU96_03685 PF01325 Iron dependent repressor, N-terminal DNA binding domain DQU96_03695 PF03808 Glycosyl transferase WecB/TagA/CpsF family DQU96_03700 PF00005 ABC transporter DQU96_03705 PF01061 ABC-2 type transporter DQU96_03710 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase DQU96_03715 PF00535 Glycosyl transferase family 2 DQU96_03720 PF01467 Cytidylyltransferase-like DQU96_03725 PF07943 Penicillin-binding protein 5, C-terminal domain DQU96_03725 PF00768 D-alanyl-D-alanine carboxypeptidase DQU96_03730 PF00005 ABC transporter DQU96_03730 PF00664 ABC transporter transmembrane region DQU96_03735 PF07662 Na+ dependent nucleoside transporter C-terminus DQU96_03735 PF01773 Na+ dependent nucleoside transporter N-terminus DQU96_03745 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) DQU96_03745 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 DQU96_03750 PF00005 ABC transporter DQU96_03755 PF01032 FecCD transport family DQU96_03760 PF01032 FecCD transport family DQU96_03765 PF02733 Dak1 domain DQU96_03770 PF02734 DAK2 domain DQU96_03775 PF03610 PTS system fructose IIA component DQU96_03815 PF00072 Response regulator receiver domain DQU96_03815 PF00486 Transcriptional regulatory protein, C terminal DQU96_03820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DQU96_03825 PF00005 ABC transporter DQU96_03830 PF02687 FtsX-like permease family DQU96_03835 PF01865 Protein of unknown function DUF47 DQU96_03840 PF01384 Phosphate transporter family DQU96_03845 PF05257 CHAP domain DQU96_03845 PF01476 LysM domain DQU96_03855 PF12833 Helix-turn-helix domain DQU96_03855 PF02311 AraC-like ligand binding domain DQU96_03865 PF01709 Transcriptional regulator DQU96_03885 PF03466 LysR substrate binding domain DQU96_03885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DQU96_03890 PF07690 Major Facilitator Superfamily DQU96_03895 PF04306 Protein of unknown function (DUF456) DQU96_03920 PF13302 Acetyltransferase (GNAT) domain DQU96_03925 PF03641 Possible lysine decarboxylase DQU96_03930 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 DQU96_03940 PF02673 Bacitracin resistance protein BacA DQU96_03945 PF00664 ABC transporter transmembrane region DQU96_03945 PF00005 ABC transporter DQU96_03950 PF00005 ABC transporter DQU96_03950 PF00664 ABC transporter transmembrane region DQU96_03955 PF01047 MarR family DQU96_03960 PF02492 CobW/HypB/UreG, nucleotide-binding domain DQU96_03960 PF07683 Cobalamin synthesis protein cobW C-terminal domain DQU96_03965 PF00248 Aldo/keto reductase family DQU96_03975 PF00939 Sodium:sulfate symporter transmembrane region DQU96_04000 PF07690 Major Facilitator Superfamily DQU96_04010 PF04073 Aminoacyl-tRNA editing domain DQU96_04015 PF08220 DeoR-like helix-turn-helix domain DQU96_04015 PF00455 DeoR C terminal sensor domain DQU96_04020 PF00294 pfkB family carbohydrate kinase DQU96_04025 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DQU96_04025 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DQU96_04030 PF01979 Amidohydrolase family DQU96_04035 PF01595 Cyclin M transmembrane N-terminal domain DQU96_04035 PF00571 CBS domain DQU96_04035 PF03471 Transporter associated domain DQU96_04040 PF00248 Aldo/keto reductase family DQU96_04045 PF00535 Glycosyl transferase family 2 DQU96_04050 PF00512 His Kinase A (phospho-acceptor) domain DQU96_04050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DQU96_04055 PF00072 Response regulator receiver domain DQU96_04055 PF00486 Transcriptional regulatory protein, C terminal DQU96_04075 PF04055 Radical SAM superfamily DQU96_04080 PF01242 6-pyruvoyl tetrahydropterin synthase DQU96_04085 PF06508 Queuosine biosynthesis protein QueC DQU96_04090 PF00117 Glutamine amidotransferase class-I DQU96_04090 PF02885 Glycosyl transferase family, helical bundle domain DQU96_04090 PF00591 Glycosyl transferase family, a/b domain DQU96_04095 PF00425 chorismate binding enzyme DQU96_04095 PF04715 Anthranilate synthase component I, N terminal region DQU96_04120 PF00884 Sulfatase DQU96_04125 PF12848 ABC transporter DQU96_04125 PF16326 ABC transporter C-terminal domain DQU96_04125 PF00005 ABC transporter DQU96_04130 PF00271 Helicase conserved C-terminal domain DQU96_04130 PF00570 HRDC domain DQU96_04130 PF16124 RecQ zinc-binding DQU96_04130 PF09382 RQC domain DQU96_04130 PF00270 DEAD/DEAH box helicase DQU96_04135 PF00005 ABC transporter DQU96_04135 PF00571 CBS domain DQU96_04140 PF00528 Binding-protein-dependent transport system inner membrane component DQU96_04145 PF00155 Aminotransferase class I and II DQU96_04150 PF06941 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) DQU96_04160 PF00781 Diacylglycerol kinase catalytic domain DQU96_04170 PF00854 POT family DQU96_04180 PF14489 QueF-like protein DQU96_04195 PF07972 NrdI Flavodoxin like DQU96_04200 PF08343 Ribonucleotide reductase N-terminal DQU96_04200 PF00317 Ribonucleotide reductase, all-alpha domain DQU96_04200 PF02867 Ribonucleotide reductase, barrel domain DQU96_04205 PF00268 Ribonucleotide reductase, small chain DQU96_04215 PF01032 FecCD transport family DQU96_04220 PF01032 FecCD transport family DQU96_04225 PF00005 ABC transporter DQU96_04230 PF01497 Periplasmic binding protein DQU96_04240 PF01565 FAD binding domain DQU96_04240 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain DQU96_04260 PF02595 Glycerate kinase family DQU96_04265 PF01546 Peptidase family M20/M25/M40 DQU96_04265 PF07687 Peptidase dimerisation domain DQU96_04280 PF07694 5TMR of 5TMR-LYT DQU96_04280 PF00990 Diguanylate cyclase, GGDEF domain DQU96_04285 PF00953 Glycosyl transferase family 4 DQU96_04290 PF09186 Domain of unknown function (DUF1949) DQU96_04290 PF01205 Uncharacterized protein family UPF0029 DQU96_04295 PF02645 Uncharacterised protein, DegV family COG1307 DQU96_04300 PF04851 Type III restriction enzyme, res subunit DQU96_04300 PF00271 Helicase conserved C-terminal domain DQU96_04310 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus DQU96_04310 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein DQU96_04315 PF02810 SEC-C motif DQU96_04315 PF07517 SecA DEAD-like domain DQU96_04315 PF01043 SecA preprotein cross-linking domain DQU96_04315 PF07516 SecA Wing and Scaffold domain DQU96_04335 PF05257 CHAP domain DQU96_04335 PF01476 LysM domain DQU96_04350 PF12344 Ultra-violet resistance protein B DQU96_04350 PF04851 Type III restriction enzyme, res subunit DQU96_04350 PF17757 UvrB interaction domain DQU96_04350 PF00271 Helicase conserved C-terminal domain DQU96_04350 PF02151 UvrB/uvrC motif DQU96_04355 PF00005 ABC transporter DQU96_04355 PF17760 UvrA interaction domain DQU96_04355 PF17755 UvrA DNA-binding domain DQU96_04360 PF02603 HPr Serine kinase N terminus DQU96_04360 PF07475 HPr Serine kinase C-terminal domain DQU96_04365 PF01790 Prolipoprotein diacylglyceryl transferase DQU96_04370 PF14602 Hexapeptide repeat of succinyl-transferase DQU96_04380 PF07992 Pyridine nucleotide-disulphide oxidoreductase DQU96_04390 PF03668 P-loop ATPase protein family DQU96_04395 PF01933 Uncharacterised protein family UPF0052 DQU96_04400 PF10298 WhiA N-terminal LAGLIDADG-like domain DQU96_04400 PF14527 WhiA LAGLIDADG-like domain DQU96_04400 PF02650 WhiA C-terminal HTH domain DQU96_04410 PF00574 Clp protease DQU96_04415 PF01370 NAD dependent epimerase/dehydratase family DQU96_04415 PF08338 Domain of unknown function (DUF1731) DQU96_04430 PF04198 Putative sugar-binding domain DQU96_04435 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain DQU96_04435 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain DQU96_04440 PF00162 Phosphoglycerate kinase DQU96_04445 PF00121 Triosephosphate isomerase DQU96_04450 PF06415 BPG-independent PGAM N-terminus (iPGM_N) DQU96_04450 PF01676 Metalloenzyme superfamily DQU96_04455 PF00113 Enolase, C-terminal TIM barrel domain DQU96_04455 PF03952 Enolase, N-terminal domain DQU96_04465 PF03840 Preprotein translocase SecG subunit DQU96_04470 PF12146 Serine aminopeptidase, S33 DQU96_04475 PF00575 S1 RNA binding domain DQU96_04475 PF08206 Ribonuclease B OB domain DQU96_04475 PF00773 RNB domain DQU96_04475 PF17876 Cold shock domain DQU96_04480 PF01668 SmpB protein DQU96_04575 PF03592 Terminase small subunit DQU96_04575 PF10668 Phage terminase small subunit DQU96_04600 PF01497 Periplasmic binding protein DQU96_04605 PF04072 Leucine carboxyl methyltransferase DQU96_04645 PF04650 YSIRK type signal peptide DQU96_04645 PF17961 Bacterial Ig domain DQU96_04645 PF04650 YSIRK type signal peptide DQU96_04645 PF10425 C-terminus of bacterial fibrinogen-binding adhesin DQU96_04645 PF00746 LPXTG cell wall anchor motif DQU96_04645 PF00746 LPXTG cell wall anchor motif DQU96_04645 PF10425 C-terminus of bacterial fibrinogen-binding adhesin DQU96_04645 PF17961 Bacterial Ig domain DQU96_04665 PF00565 Staphylococcal nuclease homologue DQU96_04670 PF00313 'Cold-shock' DNA-binding domain DQU96_04710 PF00300 Histidine phosphatase superfamily (branch 1) DQU96_04715 PF01810 LysE type translocator DQU96_04725 PF02566 OsmC-like protein DQU96_04730 PF01487 Type I 3-dehydroquinase DQU96_04740 PF00085 Thioredoxin DQU96_04745 PF03960 ArsC family DQU96_04750 PF01597 Glycine cleavage H-protein DQU96_04760 PF09234 Domain of unknown function (DUF1963) DQU96_04775 PF01751 Toprim domain DQU96_04785 PF09383 NIL domain DQU96_04785 PF00005 ABC transporter DQU96_04790 PF00528 Binding-protein-dependent transport system inner membrane component DQU96_04795 PF03180 NLPA lipoprotein DQU96_04800 PF05532 CsbD-like DQU96_04810 PF00005 ABC transporter DQU96_04815 PF01458 Uncharacterized protein family (UPF0051) DQU96_04820 PF00266 Aminotransferase class-V DQU96_04825 PF01592 NifU-like N terminal domain DQU96_04830 PF01458 Uncharacterized protein family (UPF0051) DQU96_04850 PF01595 Cyclin M transmembrane N-terminal domain DQU96_04850 PF00571 CBS domain DQU96_04850 PF03471 Transporter associated domain DQU96_04855 PF03060 Nitronate monooxygenase DQU96_04865 PF01904 Protein of unknown function DUF72 DQU96_04870 PF01925 Sulfite exporter TauE/SafE DQU96_04880 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family DQU96_04880 PF04055 Radical SAM superfamily DQU96_04885 PF06265 Protein of unknown function (DUF1027) DQU96_04905 PF01934 Protein of unknown function DUF86 DQU96_04910 PF13344 Haloacid dehalogenase-like hydrolase DQU96_04915 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DQU96_04915 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DQU96_04930 PF00501 AMP-binding enzyme DQU96_04930 PF13193 AMP-binding enzyme C-terminal domain DQU96_04935 PF03062 MBOAT, membrane-bound O-acyltransferase family DQU96_04940 PF00550 Phosphopantetheine attachment site DQU96_04945 PF04914 DltD protein DQU96_04950 PF01106 NifU-like domain DQU96_04955 PF07315 Protein of unknown function (DUF1462) DQU96_04960 PF07992 Pyridine nucleotide-disulphide oxidoreductase DQU96_04965 PF07293 Protein of unknown function (DUF1450) DQU96_04970 PF01521 Iron-sulphur cluster biosynthesis DQU96_04975 PF07992 Pyridine nucleotide-disulphide oxidoreductase DQU96_04980 PF00883 Cytosol aminopeptidase family, catalytic domain DQU96_04980 PF02789 Cytosol aminopeptidase family, N-terminal domain DQU96_04985 PF13726 Na+-H+ antiporter family DQU96_04985 PF03553 Na+/H+ antiporter family DQU96_04990 PF03061 Thioesterase superfamily DQU96_05000 PF03334 Na+/H+ antiporter subunit DQU96_05005 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) DQU96_05010 PF01899 Na+/H+ ion antiporter subunit DQU96_05015 PF00361 Proton-conducting membrane transporter DQU96_05020 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L DQU96_05025 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter DQU96_05030 PF00361 Proton-conducting membrane transporter DQU96_05030 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus DQU96_05030 PF13244 Domain of unknown function (DUF4040) DQU96_05040 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD DQU96_05045 PF00575 S1 RNA binding domain DQU96_05050 PF00724 NADH:flavin oxidoreductase / NADH oxidase family DQU96_05055 PF00202 Aminotransferase class-III DQU96_05060 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase DQU96_05060 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain DQU96_05065 PF03009 Glycerophosphoryl diester phosphodiesterase family DQU96_05070 PF14698 Argininosuccinate lyase C-terminal DQU96_05070 PF00206 Lyase DQU96_05075 PF00764 Arginosuccinate synthase DQU96_05080 PF00342 Phosphoglucose isomerase DQU96_05085 PF09335 SNARE associated Golgi protein DQU96_05090 PF10502 Signal peptidase, peptidase S26 DQU96_05095 PF10502 Signal peptidase, peptidase S26 DQU96_05100 PF12705 PD-(D/E)XK nuclease superfamily DQU96_05100 PF13361 UvrD-like helicase C-terminal domain DQU96_05105 PF13361 UvrD-like helicase C-terminal domain DQU96_05105 PF00580 UvrD/REP helicase N-terminal domain DQU96_05105 PF12705 PD-(D/E)XK nuclease superfamily DQU96_05110 PF01557 Fumarylacetoacetate (FAA) hydrolase family DQU96_05115 PF07457 Protein of unknown function (DUF1516) DQU96_05120 PF07992 Pyridine nucleotide-disulphide oxidoreductase DQU96_05120 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DQU96_05130 PF01883 Iron-sulfur cluster assembly protein DQU96_05135 PF01757 Acyltransferase family DQU96_05140 PF10431 C-terminal, D2-small domain, of ClpB protein DQU96_05140 PF02861 Clp amino terminal domain, pathogenicity island component DQU96_05140 PF17871 AAA lid domain DQU96_05140 PF07724 AAA domain (Cdc48 subfamily) DQU96_05140 PF00004 ATPase family associated with various cellular activities (AAA) DQU96_05165 PF01161 Phosphatidylethanolamine-binding protein DQU96_05170 PF03642 MAP domain DQU96_05180 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III DQU96_05180 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal DQU96_05185 PF00109 Beta-ketoacyl synthase, N-terminal domain DQU96_05185 PF02801 Beta-ketoacyl synthase, C-terminal domain DQU96_05195 PF00528 Binding-protein-dependent transport system inner membrane component DQU96_05205 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DQU96_05205 PF00005 ABC transporter DQU96_05210 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DQU96_05210 PF00005 ABC transporter DQU96_05215 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DQU96_05220 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DQU96_05225 PF00005 ABC transporter DQU96_05225 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DQU96_05230 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DQU96_05230 PF00005 ABC transporter DQU96_05235 PF00528 Binding-protein-dependent transport system inner membrane component DQU96_05240 PF00528 Binding-protein-dependent transport system inner membrane component DQU96_05240 PF12911 N-terminal TM domain of oligopeptide transport permease C DQU96_05245 PF00579 tRNA synthetases class I (W and Y) DQU96_05250 PF03960 ArsC family DQU96_05255 PF05389 Negative regulator of genetic competence (MecA) DQU96_05265 PF01432 Peptidase family M3 DQU96_05265 PF08439 Oligopeptidase F DQU96_05275 PF01152 Bacterial-like globin DQU96_05290 PF04607 Region found in RelA / SpoT proteins DQU96_05295 PF01513 ATP-NAD kinase DQU96_05300 PF00849 RNA pseudouridylate synthase DQU96_05305 PF03448 MgtE intracellular N domain DQU96_05305 PF00571 CBS domain DQU96_05305 PF01769 Divalent cation transporter DQU96_05310 PF00999 Sodium/hydrogen exchanger family DQU96_05310 PF02254 TrkA-N domain DQU96_05310 PF02080 TrkA-C domain DQU96_05330 PF01594 AI-2E family transporter DQU96_05335 PF01235 Sodium:alanine symporter family DQU96_05350 PF07690 Major Facilitator Superfamily DQU96_05355 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase DQU96_05355 PF04101 Glycosyltransferase family 28 C-terminal domain DQU96_05360 PF02875 Mur ligase family, glutamate ligase domain DQU96_05360 PF08245 Mur ligase middle domain DQU96_05360 PF01225 Mur ligase family, catalytic domain DQU96_05370 PF16658 Class II release factor RF3, C-terminal domain DQU96_05370 PF00009 Elongation factor Tu GTP binding domain DQU96_05370 PF03144 Elongation factor Tu domain 2 DQU96_05375 PF03741 Integral membrane protein TerC family DQU96_05385 PF13180 PDZ domain DQU96_05390 PF02386 Cation transport protein DQU96_05395 PF00149 Calcineurin-like phosphoesterase DQU96_05395 PF02872 5'-nucleotidase, C-terminal domain DQU96_05410 PF06338 ComK protein DQU96_05420 PF10437 Bacterial lipoate protein ligase C-terminus DQU96_05420 PF03099 Biotin/lipoate A/B protein ligase family DQU96_05425 PF09953 Uncharacterized protein conserved in bacteria (DUF2187) DQU96_05460 PF02687 FtsX-like permease family DQU96_05460 PF00005 ABC transporter DQU96_05460 PF12704 MacB-like periplasmic core domain DQU96_05470 PF00534 Glycosyl transferases group 1 DQU96_05480 PF01497 Periplasmic binding protein DQU96_05490 PF05154 TM2 domain DQU96_05495 PF00583 Acetyltransferase (GNAT) family DQU96_05500 PF01040 UbiA prenyltransferase family DQU96_05510 PF00425 chorismate binding enzyme DQU96_05515 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DQU96_05515 PF16582 Middle domain of thiamine pyrophosphate DQU96_05515 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DQU96_05520 PF00561 alpha/beta hydrolase fold DQU96_05525 PF00378 Enoyl-CoA hydratase/isomerase DQU96_05530 PF09023 Staphostatin B DQU96_05535 PF05543 Staphopain peptidase C47 DQU96_05535 PF14731 Staphopain proregion DQU96_05545 PF00155 Aminotransferase class I and II DQU96_05550 PF01757 Acyltransferase family DQU96_05565 PF13457 GW (Gly-Tryp) dipeptide domain DQU96_05565 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase DQU96_05570 PF13673 Acetyltransferase (GNAT) domain DQU96_05575 PF10804 Protein of unknown function (DUF2538) DQU96_05580 PF03816 Cell envelope-related transcriptional attenuator domain DQU96_05585 PF00144 Beta-lactamase DQU96_05590 PF03626 Prokaryotic Cytochrome C oxidase subunit IV DQU96_05595 PF00510 Cytochrome c oxidase subunit III DQU96_05600 PF00115 Cytochrome C and Quinol oxidase polypeptide I DQU96_05605 PF00116 Cytochrome C oxidase subunit II, periplasmic domain DQU96_05605 PF02790 Cytochrome C oxidase subunit II, transmembrane domain DQU96_05620 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain DQU96_05620 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain DQU96_05625 PF00731 AIR carboxylase DQU96_05630 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain DQU96_05630 PF02222 ATP-grasp domain DQU96_05630 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DQU96_05635 PF01259 SAICAR synthetase DQU96_05640 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase DQU96_05650 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain DQU96_05650 PF02769 AIR synthase related protein, C-terminal domain DQU96_05650 PF00586 AIR synthase related protein, N-terminal domain DQU96_05655 PF00156 Phosphoribosyl transferase domain DQU96_05655 PF13537 Glutamine amidotransferase domain DQU96_05660 PF00586 AIR synthase related protein, N-terminal domain DQU96_05660 PF02769 AIR synthase related protein, C-terminal domain DQU96_05665 PF00551 Formyl transferase DQU96_05670 PF01808 AICARFT/IMPCHase bienzyme DQU96_05670 PF02142 MGS-like domain DQU96_05675 PF02844 Phosphoribosylglycinamide synthetase, N domain DQU96_05675 PF02843 Phosphoribosylglycinamide synthetase, C domain DQU96_05675 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain DQU96_05680 PF02361 Cobalt transport protein DQU96_05685 PF00005 ABC transporter DQU96_05690 PF09819 ABC-type cobalt transport system, permease component DQU96_05715 PF17785 PUA-like domain DQU96_05715 PF10672 S-adenosylmethionine-dependent methyltransferase DQU96_05725 PF00381 PTS HPr component phosphorylation site DQU96_05730 PF05524 PEP-utilising enzyme, N-terminal DQU96_05730 PF02896 PEP-utilising enzyme, TIM barrel domain DQU96_05730 PF00391 PEP-utilising enzyme, mobile domain DQU96_05740 PF00462 Glutaredoxin DQU96_05745 PF01654 Cytochrome bd terminal oxidase subunit I DQU96_05750 PF02322 Cytochrome bd terminal oxidase subunit II DQU96_05755 PF02254 TrkA-N domain DQU96_05755 PF02080 TrkA-C domain DQU96_05760 PF17770 Ribonuclease J C-terminal domain DQU96_05760 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain DQU96_05760 PF00753 Metallo-beta-lactamase superfamily DQU96_05775 PF01327 Polypeptide deformylase DQU96_05785 PF00676 Dehydrogenase E1 component DQU96_05790 PF02779 Transketolase, pyrimidine binding domain DQU96_05790 PF02780 Transketolase, C-terminal domain DQU96_05795 PF02817 e3 binding domain DQU96_05795 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) DQU96_05795 PF00364 Biotin-requiring enzyme DQU96_05800 PF07992 Pyridine nucleotide-disulphide oxidoreductase DQU96_05800 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DQU96_05805 PF05256 Uncharacterised protein family (UPF0223) DQU96_05815 PF08402 TOBE domain DQU96_05815 PF00005 ABC transporter DQU96_05820 PF00528 Binding-protein-dependent transport system inner membrane component DQU96_05825 PF00528 Binding-protein-dependent transport system inner membrane component DQU96_05830 PF13416 Bacterial extracellular solute-binding protein DQU96_05845 PF01566 Natural resistance-associated macrophage protein DQU96_05850 PF06335 Protein of unknown function (DUF1054) DQU96_05855 PF00459 Inositol monophosphatase family DQU96_05880 PF07408 Protein of unknown function (DUF1507) DQU96_05885 PF01098 Cell cycle protein DQU96_05890 PF02785 Biotin carboxylase C-terminal domain DQU96_05890 PF00289 Biotin carboxylase, N-terminal domain DQU96_05890 PF00364 Biotin-requiring enzyme DQU96_05890 PF02436 Conserved carboxylase domain DQU96_05890 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DQU96_05890 PF00682 HMGL-like DQU96_05895 PF02628 Cytochrome oxidase assembly protein DQU96_05900 PF01040 UbiA prenyltransferase family DQU96_05920 PF06133 Control of competence regulator ComK, YlbF/YmcA DQU96_05925 PF03009 Glycerophosphoryl diester phosphodiesterase family DQU96_05930 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) DQU96_05945 PF01467 Cytidylyltransferase-like DQU96_05950 PF05636 HIGH Nucleotidyl Transferase DQU96_05965 PF01783 Ribosomal L32p protein family DQU96_05970 PF00239 Resolvase, N terminal domain DQU96_05970 PF02796 Helix-turn-helix domain of resolvase DQU96_06040 PF00436 Single-strand binding protein family DQU96_06125 PF17288 Terminase RNAseH like domain DQU96_06125 PF04466 Phage terminase large subunit DQU96_06235 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase DQU96_06235 PF13457 GW (Gly-Tryp) dipeptide domain DQU96_06255 PF05257 CHAP domain DQU96_06255 PF01510 N-acetylmuramoyl-L-alanine amidase DQU96_06255 PF08460 Bacterial SH3 domain DQU96_06270 PF05031 Iron Transport-associated domain DQU96_06270 PF04650 YSIRK type signal peptide DQU96_06270 PF00746 LPXTG cell wall anchor motif DQU96_06275 PF05031 Iron Transport-associated domain DQU96_06275 PF00746 LPXTG cell wall anchor motif DQU96_06280 PF05031 Iron Transport-associated domain DQU96_06290 PF01497 Periplasmic binding protein DQU96_06295 PF01032 FecCD transport family DQU96_06300 PF04203 Sortase domain DQU96_06305 PF03992 Antibiotic biosynthesis monooxygenase DQU96_06315 PF00588 SpoU rRNA Methylase family DQU96_06315 PF08032 RNA 2'-O ribose methyltransferase substrate binding DQU96_06320 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain DQU96_06320 PF01409 tRNA synthetases class II core domain (F) DQU96_06325 PF03483 B3/4 domain DQU96_06325 PF03484 tRNA synthetase B5 domain DQU96_06325 PF03147 Ferredoxin-fold anticodon binding domain DQU96_06325 PF01588 Putative tRNA binding domain DQU96_06325 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain DQU96_06345 PF01351 Ribonuclease HII DQU96_06345 PF11858 Domain of unknown function (DUF3378) DQU96_06350 PF05164 Cell division protein ZapA DQU96_06360 PF14716 Helix-hairpin-helix domain DQU96_06360 PF02811 PHP domain DQU96_06360 PF14791 DNA polymerase beta thumb DQU96_06365 PF00488 MutS domain V DQU96_06365 PF01713 Smr domain DQU96_06370 PF00085 Thioredoxin DQU96_06380 PF08459 UvrC Helix-hairpin-helix N-terminal DQU96_06380 PF02151 UvrB/uvrC motif DQU96_06380 PF01541 GIY-YIG catalytic domain DQU96_06385 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit DQU96_06390 PF02910 Fumarate reductase flavoprotein C-term DQU96_06390 PF00890 FAD binding domain DQU96_06395 PF13183 4Fe-4S dicluster domain DQU96_06395 PF13085 2Fe-2S iron-sulfur cluster binding domain DQU96_06400 PF01177 Asp/Glu/Hydantoin racemase DQU96_06405 PF01725 Ham1 family DQU96_06410 PF12850 Calcineurin-like phosphoesterase superfamily domain DQU96_06430 PF16104 Formyl peptide receptor-like 1 inhibitory protein DQU96_06440 PF12199 Extracellular fibrinogen binding protein C terminal DQU96_06480 PF07968 Leukocidin/Hemolysin toxin family DQU96_06505 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain DQU96_06505 PF09199 Staphylococcal superantigen-like OB-fold domain DQU96_06510 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain DQU96_06510 PF09199 Staphylococcal superantigen-like OB-fold domain DQU96_06515 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain DQU96_06515 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain DQU96_06520 PF00696 Amino acid kinase family DQU96_06525 PF03606 C4-dicarboxylate anaerobic carrier DQU96_06550 PF05480 Staphylococcus haemolytic protein DQU96_06555 PF05480 Staphylococcus haemolytic protein DQU96_06560 PF13419 Haloacid dehalogenase-like hydrolase DQU96_06570 PF10079 Bacillithiol biosynthesis BshC DQU96_06575 PF02381 MraZ protein, putative antitoxin-like DQU96_06580 PF01795 MraW methylase family DQU96_06585 PF04977 Septum formation initiator DQU96_06595 PF00953 Glycosyl transferase family 4 DQU96_06600 PF08245 Mur ligase middle domain DQU96_06600 PF02875 Mur ligase family, glutamate ligase domain DQU96_06605 PF03799 Cell division protein FtsQ DQU96_06605 PF08478 POTRA domain, FtsQ-type DQU96_06610 PF02491 SHS2 domain inserted in FTSA DQU96_06615 PF12327 FtsZ family, C-terminal domain DQU96_06615 PF00091 Tubulin/FtsZ family, GTPase domain DQU96_06625 PF01168 Alanine racemase, N-terminal domain DQU96_06630 PF04472 Cell division protein SepF DQU96_06635 PF02325 YGGT family DQU96_06640 PF17774 Putative RNA-binding domain in YlmH DQU96_06640 PF01479 S4 domain DQU96_06645 PF05103 DivIVA protein DQU96_06650 PF08264 Anticodon-binding domain of tRNA DQU96_06650 PF00133 tRNA synthetases class I (I, L, M and V) DQU96_06650 PF06827 Zinc finger found in FPG and IleRS DQU96_06655 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DQU96_06670 PF01252 Signal peptidase (SPase) II DQU96_06675 PF01479 S4 domain DQU96_06675 PF00849 RNA pseudouridylate synthase DQU96_06680 PF00156 Phosphoribosyl transferase domain DQU96_06685 PF00860 Permease family DQU96_06690 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain DQU96_06690 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain DQU96_06695 PF01979 Amidohydrolase family DQU96_06700 PF00117 Glutamine amidotransferase class-I DQU96_06700 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain DQU96_06705 PF02142 MGS-like domain DQU96_06705 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain DQU96_06705 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DQU96_06710 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family DQU96_06715 PF00156 Phosphoribosyl transferase domain DQU96_06735 PF00625 Guanylate kinase DQU96_06740 PF01192 RNA polymerase Rpb6 DQU96_06745 PF04127 DNA / pantothenate metabolism flavoprotein DQU96_06745 PF02441 Flavoprotein DQU96_06750 PF00271 Helicase conserved C-terminal domain DQU96_06750 PF17764 3′ DNA-binding domain (3′BD) DQU96_06750 PF18074 Primosomal protein N C-terminal domain DQU96_06750 PF18319 PriA DNA helicase Cys-rich region (CRR) domain DQU96_06750 PF04851 Type III restriction enzyme, res subunit DQU96_06760 PF05154 TM2 domain DQU96_06765 PF01327 Polypeptide deformylase DQU96_06770 PF00551 Formyl transferase DQU96_06770 PF02911 Formyl transferase, C-terminal domain DQU96_06775 PF01189 16S rRNA methyltransferase RsmB/F DQU96_06775 PF01029 NusB family DQU96_06780 PF04055 Radical SAM superfamily DQU96_06790 PF00069 Protein kinase domain DQU96_06790 PF03793 PASTA domain DQU96_06795 PF03193 RsgA GTPase DQU96_06795 PF16745 RsgA N-terminal domain DQU96_06800 PF00834 Ribulose-phosphate 3 epimerase family DQU96_06810 PF00830 Ribosomal L28 family DQU96_06815 PF03780 Asp23 family, cell envelope-related function DQU96_06820 PF02734 DAK2 domain DQU96_06820 PF13684 Dihydroxyacetone kinase family DQU96_06825 PF00270 DEAD/DEAH box helicase DQU96_06825 PF00271 Helicase conserved C-terminal domain DQU96_06825 PF17191 RecG wedge domain DQU96_06830 PF03061 Thioesterase superfamily DQU96_06835 PF02504 Fatty acid synthesis protein DQU96_06840 PF00698 Acyl transferase domain DQU96_06855 PF00550 Phosphopantetheine attachment site DQU96_06860 PF00035 Double-stranded RNA binding motif DQU96_06860 PF14622 Ribonuclease-III-like DQU96_06865 PF06470 SMC proteins Flexible Hinge Domain DQU96_06865 PF02463 RecF/RecN/SMC N terminal domain DQU96_06870 PF02881 SRP54-type protein, helical bundle domain DQU96_06870 PF00448 SRP54-type protein, GTPase domain DQU96_06875 PF04297 Putative helix-turn-helix protein, YlxM / p13 like DQU96_06880 PF02881 SRP54-type protein, helical bundle domain DQU96_06880 PF00448 SRP54-type protein, GTPase domain DQU96_06880 PF02978 Signal peptide binding domain DQU96_06885 PF00886 Ribosomal protein S16 DQU96_06890 PF05239 PRC-barrel domain DQU96_06890 PF01782 RimM N-terminal domain DQU96_06895 PF01746 tRNA (Guanine-1)-methyltransferase DQU96_06900 PF01245 Ribosomal protein L19 DQU96_06910 PF01926 50S ribosome-binding GTPase DQU96_06915 PF01351 Ribonuclease HII DQU96_06920 PF08442 ATP-grasp domain DQU96_06920 PF00549 CoA-ligase DQU96_06925 PF02629 CoA binding domain DQU96_06925 PF00549 CoA-ligase DQU96_06930 PF01476 LysM domain DQU96_06930 PF05257 CHAP domain DQU96_06935 PF02388 FemAB family DQU96_06940 PF02481 DNA recombination-mediator protein A DQU96_06945 PF01131 DNA topoisomerase DQU96_06945 PF01751 Toprim domain DQU96_06945 PF01396 Topoisomerase DNA binding C4 zinc finger DQU96_06950 PF01134 Glucose inhibited division protein A DQU96_06955 PF00589 Phage integrase family DQU96_06955 PF02899 Phage integrase, N-terminal SAM-like domain DQU96_06960 PF00227 Proteasome subunit DQU96_06965 PF07724 AAA domain (Cdc48 subfamily) DQU96_06965 PF00004 ATPase family associated with various cellular activities (AAA) DQU96_06965 PF10431 C-terminal, D2-small domain, of ClpB protein DQU96_06970 PF08222 CodY helix-turn-helix domain DQU96_06970 PF06018 CodY GAF-like domain DQU96_06980 PF00318 Ribosomal protein S2 DQU96_06990 PF00889 Elongation factor TS DQU96_06995 PF00696 Amino acid kinase family DQU96_07000 PF01765 Ribosome recycling factor DQU96_07005 PF01255 Putative undecaprenyl diphosphate synthase DQU96_07015 PF13180 PDZ domain DQU96_07015 PF02163 Peptidase family M50 DQU96_07020 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DQU96_07020 PF03129 Anticodon binding domain DQU96_07020 PF04073 Aminoacyl-tRNA editing domain DQU96_07025 PF11490 DNA polymerase III polC-type N-terminus II DQU96_07025 PF14579 Helix-hairpin-helix motif DQU96_07025 PF07733 Bacterial DNA polymerase III alpha NTPase domain DQU96_07025 PF00929 Exonuclease DQU96_07025 PF17657 Bacterial DNA polymerase III alpha subunit finger domain DQU96_07025 PF14480 DNA polymerase III polC-type N-terminus I DQU96_07025 PF02811 PHP domain DQU96_07035 PF02576 RimP N-terminal domain DQU96_07035 PF17384 RimP C-terminal SH3 domain DQU96_07040 PF00575 S1 RNA binding domain DQU96_07040 PF08529 NusA N-terminal domain DQU96_07040 PF13184 NusA-like KH domain DQU96_07045 PF04296 Protein of unknown function (DUF448) DQU96_07050 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family DQU96_07055 PF11987 Translation-initiation factor 2 DQU96_07055 PF00009 Elongation factor Tu GTP binding domain DQU96_07055 PF04760 Translation initiation factor IF-2, N-terminal region DQU96_07060 PF02033 Ribosome-binding factor A DQU96_07065 PF16198 tRNA pseudouridylate synthase B C-terminal domain DQU96_07065 PF01509 TruB family pseudouridylate synthase (N terminal domain) DQU96_07070 PF01687 Riboflavin kinase DQU96_07070 PF06574 FAD synthetase DQU96_07075 PF00312 Ribosomal protein S15 DQU96_07080 PF03725 3' exoribonuclease family, domain 2 DQU96_07080 PF01138 3' exoribonuclease family, domain 1 DQU96_07080 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain DQU96_07080 PF00013 KH domain DQU96_07080 PF00575 S1 RNA binding domain DQU96_07090 PF00753 Metallo-beta-lactamase superfamily DQU96_07090 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain DQU96_07090 PF17770 Ribonuclease J C-terminal domain DQU96_07095 PF17854 FtsK alpha domain DQU96_07095 PF01580 FtsK/SpoIIIE family DQU96_07095 PF09397 Ftsk gamma domain DQU96_07100 PF00392 Bacterial regulatory proteins, gntR family DQU96_07100 PF07702 UTRA domain DQU96_07105 PF05193 Peptidase M16 inactive domain DQU96_07110 PF00675 Insulinase (Peptidase family M16) DQU96_07110 PF05193 Peptidase M16 inactive domain DQU96_07120 PF11868 Protein of unknown function (DUF3388) DQU96_07130 PF01066 CDP-alcohol phosphatidyltransferase DQU96_07135 PF18146 Damage-inducible protein CinA KH domain DQU96_07135 PF00994 Probable molybdopterin binding domain DQU96_07135 PF02464 Competence-damaged protein DQU96_07140 PF00154 recA bacterial DNA recombination protein DQU96_07145 PF12072 Domain of unknown function (DUF3552) DQU96_07145 PF00013 KH domain DQU96_07145 PF01966 HD domain DQU96_07155 PF13277 YmdB-like protein DQU96_07160 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II DQU96_07160 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg DQU96_07160 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase DQU96_07165 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DQU96_07170 PF01910 Thiamine-binding protein DQU96_07175 PF00919 Uncharacterized protein family UPF0004 DQU96_07175 PF01938 TRAM domain DQU96_07175 PF04055 Radical SAM superfamily DQU96_07190 PF01624 MutS domain I DQU96_07190 PF05190 MutS family domain IV DQU96_07190 PF00488 MutS domain V DQU96_07190 PF05188 MutS domain II DQU96_07190 PF05192 MutS domain III DQU96_07195 PF08676 MutL C terminal dimerisation domain DQU96_07195 PF01119 DNA mismatch repair protein, C-terminal domain DQU96_07200 PF04309 Glycerol-3-phosphate responsive antiterminator DQU96_07205 PF00230 Major intrinsic protein DQU96_07210 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DQU96_07210 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DQU96_07215 PF16901 C-terminal domain of alpha-glycerophosphate oxidase DQU96_07215 PF01266 FAD dependent oxidoreductase DQU96_07230 PF17209 Hfq protein DQU96_07235 PF00255 Glutathione peroxidase DQU96_07245 PF06838 Methionine gamma-lyase DQU96_07250 PF13411 MerR HTH family regulatory protein DQU96_07255 PF00120 Glutamine synthetase, catalytic domain DQU96_07255 PF03951 Glutamine synthetase, beta-Grasp domain DQU96_07330 PF13396 Phospholipase_D-nuclease N-terminal DQU96_07330 PF13091 PLD-like domain DQU96_07335 PF00005 ABC transporter DQU96_07350 PF00196 Bacterial regulatory proteins, luxR family DQU96_07350 PF00072 Response regulator receiver domain DQU96_07360 PF00565 Staphylococcal nuclease homologue DQU96_07375 PF00696 Amino acid kinase family DQU96_07375 PF13840 ACT domain DQU96_07380 PF00742 Homoserine dehydrogenase DQU96_07380 PF03447 Homoserine dehydrogenase, NAD binding domain DQU96_07380 PF01842 ACT domain DQU96_07385 PF00291 Pyridoxal-phosphate dependent enzyme DQU96_07390 PF00288 GHMP kinases N terminal domain DQU96_07390 PF08544 GHMP kinases C terminal DQU96_07410 PF00324 Amino acid permease DQU96_07415 PF00199 Catalase DQU96_07415 PF06628 Catalase-related immune-responsive DQU96_07420 PF00471 Ribosomal protein L33 DQU96_07425 PF00253 Ribosomal protein S14p/S29e DQU96_07430 PF00478 IMP dehydrogenase / GMP reductase domain DQU96_07440 PF00188 Cysteine-rich secretory protein family DQU96_07445 PF01726 LexA DNA binding domain DQU96_07445 PF00717 Peptidase S24-like DQU96_07455 PF05979 Bacterial protein of unknown function (DUF896) DQU96_07460 PF02780 Transketolase, C-terminal domain DQU96_07460 PF00456 Transketolase, thiamine diphosphate binding domain DQU96_07460 PF02779 Transketolase, pyrimidine binding domain DQU96_07465 PF03672 Uncharacterised protein family (UPF0154) DQU96_07475 PF07301 Protein of unknown function (DUF1453) DQU96_07480 PF00149 Calcineurin-like phosphoesterase DQU96_07480 PF12320 Type 5 capsule protein repressor C-terminal domain DQU96_07485 PF13476 AAA domain DQU96_07490 PF01741 Large-conductance mechanosensitive channel, MscL DQU96_07495 PF02028 BCCT, betaine/carnitine/choline family transporter DQU96_07505 PF00330 Aconitase family (aconitate hydratase) DQU96_07505 PF00694 Aconitase C-terminal domain DQU96_07510 PF03061 Thioesterase superfamily DQU96_07530 PF02660 Glycerol-3-phosphate acyltransferase DQU96_07535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DQU96_07535 PF00986 DNA gyrase B subunit, carboxyl terminus DQU96_07535 PF00204 DNA gyrase B DQU96_07535 PF01751 Toprim domain DQU96_07540 PF03989 DNA gyrase C-terminal domain, beta-propeller DQU96_07540 PF00521 DNA gyrase/topoisomerase IV, subunit A DQU96_07550 PF01235 Sodium:alanine symporter family DQU96_07555 PF03123 CAT RNA binding domain DQU96_07555 PF00874 PRD domain DQU96_07565 PF01594 AI-2E family transporter DQU96_07570 PF03706 Lysylphosphatidylglycerol synthase TM region DQU96_07570 PF09924 Uncharacterised conserved protein (DUF2156) DQU96_07575 PF01625 Peptide methionine sulfoxide reductase DQU96_07580 PF03816 Cell envelope-related transcriptional attenuator domain DQU96_07585 PF01361 Tautomerase enzyme DQU96_07590 PF11798 IMS family HHH motif DQU96_07590 PF11799 impB/mucB/samB family C-terminal domain DQU96_07590 PF00817 impB/mucB/samB family DQU96_07595 PF02153 Prephenate dehydrogenase DQU96_07600 PF05343 M42 glutamyl aminopeptidase DQU96_07605 PF04715 Anthranilate synthase component I, N terminal region DQU96_07605 PF00425 chorismate binding enzyme DQU96_07610 PF00117 Glutamine amidotransferase class-I DQU96_07615 PF00591 Glycosyl transferase family, a/b domain DQU96_07620 PF00218 Indole-3-glycerol phosphate synthase DQU96_07625 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase DQU96_07630 PF00291 Pyridoxal-phosphate dependent enzyme DQU96_07635 PF00290 Tryptophan synthase alpha chain DQU96_07640 PF02388 FemAB family DQU96_07645 PF02388 FemAB family DQU96_07665 PF00005 ABC transporter DQU96_07670 PF00005 ABC transporter DQU96_07675 PF00528 Binding-protein-dependent transport system inner membrane component DQU96_07680 PF00528 Binding-protein-dependent transport system inner membrane component DQU96_07695 PF08439 Oligopeptidase F DQU96_07695 PF01432 Peptidase family M3 DQU96_07700 PF01895 PhoU domain DQU96_07705 PF00005 ABC transporter DQU96_07710 PF00528 Binding-protein-dependent transport system inner membrane component DQU96_07715 PF00528 Binding-protein-dependent transport system inner membrane component DQU96_07720 PF12849 PBP superfamily domain DQU96_07730 PF17783 CvfB-like winged helix domain DQU96_07730 PF13509 S1 domain DQU96_07735 PF12848 ABC transporter DQU96_07735 PF00005 ABC transporter DQU96_07745 PF00696 Amino acid kinase family DQU96_07745 PF13840 ACT domain DQU96_07745 PF01842 ACT domain DQU96_07750 PF02774 Semialdehyde dehydrogenase, dimerisation domain DQU96_07750 PF01118 Semialdehyde dehydrogenase, NAD binding domain DQU96_07755 PF00701 Dihydrodipicolinate synthetase family DQU96_07760 PF05173 Dihydrodipicolinate reductase, C-terminus DQU96_07760 PF01113 Dihydrodipicolinate reductase, N-terminus DQU96_07765 PF00132 Bacterial transferase hexapeptide (six repeats) DQU96_07765 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal DQU96_07765 PF14602 Hexapeptide repeat of succinyl-transferase DQU96_07770 PF01546 Peptidase family M20/M25/M40 DQU96_07775 PF00842 Alanine racemase, C-terminal domain DQU96_07775 PF01168 Alanine racemase, N-terminal domain DQU96_07780 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain DQU96_07780 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain DQU96_07790 PF00313 'Cold-shock' DNA-binding domain DQU96_07805 PF00708 Acylphosphatase DQU96_07815 PF05816 Toxic anion resistance protein (TelA) DQU96_07820 PF05525 Branched-chain amino acid transport protein DQU96_07825 PF00092 von Willebrand factor type A domain DQU96_07830 PF07728 AAA domain (dynein-related subfamily) DQU96_07830 PF08406 CbbQ/NirQ/NorQ C-terminal DQU96_07845 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) DQU96_07845 PF00364 Biotin-requiring enzyme DQU96_07845 PF02817 e3 binding domain DQU96_07850 PF02779 Transketolase, pyrimidine binding domain DQU96_07850 PF16870 2-oxoglutarate dehydrogenase C-terminal DQU96_07850 PF00676 Dehydrogenase E1 component DQU96_07855 PF18719 ArlS sensor domain DQU96_07855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DQU96_07855 PF00512 His Kinase A (phospho-acceptor) domain DQU96_07860 PF00072 Response regulator receiver domain DQU96_07860 PF00486 Transcriptional regulatory protein, C terminal DQU96_07875 PF01569 PAP2 superfamily DQU96_07880 PF04101 Glycosyltransferase family 28 C-terminal domain DQU96_07880 PF03033 Glycosyltransferase family 28 N-terminal domain DQU96_07890 PF13180 PDZ domain DQU96_07890 PF01471 Putative peptidoglycan binding domain DQU96_07890 PF03572 Peptidase family S41 DQU96_07895 PF06855 YozE SAM-like fold DQU96_07900 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 DQU96_07905 PF01641 SelR domain DQU96_07910 PF01625 Peptide methionine sulfoxide reductase DQU96_07915 PF02645 Uncharacterised protein, DegV family COG1307 DQU96_07920 PF00186 Dihydrofolate reductase DQU96_07925 PF00303 Thymidylate synthase DQU96_07930 PF06491 Disulphide isomerase DQU96_07940 PF08712 Scaffold protein Nfu/NifU N terminal DQU96_07940 PF13769 Virulence factor DQU96_07945 PF10782 Zinc-finger DQU96_07950 PF02592 Putative vitamin uptake transporter DQU96_07960 PF07564 Domain of Unknown Function (DUF1542) DQU96_07960 PF01468 GA module DQU96_07960 PF04650 YSIRK type signal peptide DQU96_07965 PF07690 Major Facilitator Superfamily DQU96_07970 PF13520 Amino acid permease DQU96_07975 PF00291 Pyridoxal-phosphate dependent enzyme DQU96_07980 PF01262 Alanine dehydrogenase/PNT, C-terminal domain DQU96_07980 PF05222 Alanine dehydrogenase/PNT, N-terminal domain DQU96_07985 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain DQU96_07985 PF01367 5'-3' exonuclease, C-terminal SAM fold DQU96_07990 PF00350 Dynamin family DQU96_08005 PF01170 Putative RNA methylase family UPF0020 DQU96_08005 PF02926 THUMP domain DQU96_08015 PF05103 DivIVA protein DQU96_08020 PF06908 YspA SLOG family DQU96_08040 PF03838 Recombination protein U DQU96_08045 PF00912 Transglycosylase DQU96_08045 PF00905 Penicillin binding protein transpeptidase domain DQU96_08055 PF10576 Iron-sulfur binding domain of endonuclease III DQU96_08055 PF00730 HhH-GPD superfamily base excision DNA repair protein DQU96_08055 PF00633 Helix-hairpin-helix motif DQU96_08060 PF07261 Replication initiation and membrane attachment DQU96_08065 PF01336 OB-fold nucleic acid binding domain DQU96_08065 PF00152 tRNA synthetases class II (D, K and N) DQU96_08070 PF00929 Exonuclease DQU96_08070 PF13307 Helicase C-terminal domain DQU96_08075 PF02237 Biotin protein ligase C terminal domain DQU96_08075 PF08279 HTH domain DQU96_08075 PF03099 Biotin/lipoate A/B protein ligase family DQU96_08080 PF12627 Probable RNA and SrmB- binding site of polymerase A DQU96_08080 PF13735 tRNA nucleotidyltransferase domain 2 putative DQU96_08080 PF01743 Poly A polymerase head domain DQU96_08085 PF13439 Glycosyltransferase Family 4 DQU96_08085 PF00534 Glycosyl transferases group 1 DQU96_08090 PF03819 MazG nucleotide pyrophosphohydrolase domain DQU96_08095 PF04298 Putative neutral zinc metallopeptidase DQU96_08100 PF07187 Protein of unknown function (DUF1405) DQU96_08105 PF08858 IDEAL domain DQU96_08105 PF08864 UPF0302 domain DQU96_08115 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) DQU96_08120 PF01761 3-dehydroquinate synthase DQU96_08125 PF01264 Chorismate synthase DQU96_08135 PF00334 Nucleoside diphosphate kinase DQU96_08140 PF00348 Polyprenyl synthetase DQU96_08145 PF01209 ubiE/COQ5 methyltransferase family DQU96_08160 PF00216 Bacterial DNA-binding protein DQU96_08165 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus DQU96_08165 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus DQU96_08170 PF01926 50S ribosome-binding GTPase DQU96_08170 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal DQU96_08175 PF00575 S1 RNA binding domain DQU96_08195 PF02224 Cytidylate kinase DQU96_08200 PF17763 Glutaminase/Asparaginase C-terminal domain DQU96_08200 PF00710 Asparaginase, N-terminal DQU96_08215 PF01476 LysM domain DQU96_08220 PF00271 Helicase conserved C-terminal domain DQU96_08220 PF00270 DEAD/DEAH box helicase DQU96_08235 PF12822 ECF transporter, substrate-specific component DQU96_08270 PF00512 His Kinase A (phospho-acceptor) domain DQU96_08270 PF18698 Histidine kinase sensor domain DQU96_08270 PF00672 HAMP domain DQU96_08270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DQU96_08275 PF00486 Transcriptional regulatory protein, C terminal DQU96_08275 PF00072 Response regulator receiver domain DQU96_08280 PF01479 S4 domain DQU96_08280 PF00849 RNA pseudouridylate synthase DQU96_08285 PF04079 Segregation and condensation complex subunit ScpB DQU96_08290 PF02616 Segregation and condensation protein ScpA DQU96_08300 PF02899 Phage integrase, N-terminal SAM-like domain DQU96_08300 PF00589 Phage integrase family DQU96_08305 PF01475 Ferric uptake regulator family DQU96_08310 PF00293 NUDIX domain DQU96_08315 PF00248 Aldo/keto reductase family DQU96_08325 PF00106 short chain dehydrogenase DQU96_08330 PF14748 Pyrroline-5-carboxylate reductase dimerisation DQU96_08330 PF03807 NADP oxidoreductase coenzyme F420-dependent DQU96_08335 PF12706 Beta-lactamase superfamily domain DQU96_08340 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain DQU96_08340 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain DQU96_08350 PF00128 Alpha amylase, catalytic domain DQU96_08350 PF16657 Maltogenic Amylase, C-terminal domain DQU96_08355 PF00356 Bacterial regulatory proteins, lacI family DQU96_08375 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain DQU96_08375 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase DQU96_08380 PF01546 Peptidase family M20/M25/M40 DQU96_08380 PF07687 Peptidase dimerisation domain DQU96_08390 PF06081 Aromatic acid exporter family member 1 DQU96_08390 PF11728 Putative aromatic acid exporter C-terminal domain DQU96_08395 PF06491 Disulphide isomerase DQU96_08400 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) DQU96_08400 PF02817 e3 binding domain DQU96_08400 PF00364 Biotin-requiring enzyme DQU96_08405 PF02780 Transketolase, C-terminal domain DQU96_08405 PF02779 Transketolase, pyrimidine binding domain DQU96_08410 PF00676 Dehydrogenase E1 component DQU96_08415 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DQU96_08415 PF07992 Pyridine nucleotide-disulphide oxidoreductase DQU96_08420 PF13476 AAA domain DQU96_08425 PF01316 Arginine repressor, DNA binding domain DQU96_08425 PF02863 Arginine repressor, C-terminal domain DQU96_08430 PF00348 Polyprenyl synthetase DQU96_08435 PF02609 Exonuclease VII small subunit DQU96_08440 PF02601 Exonuclease VII, large subunit DQU96_08440 PF13742 OB-fold nucleic acid binding domain DQU96_08445 PF01029 NusB family DQU96_08450 PF03780 Asp23 family, cell envelope-related function DQU96_08455 PF02785 Biotin carboxylase C-terminal domain DQU96_08455 PF00289 Biotin carboxylase, N-terminal domain DQU96_08455 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DQU96_08460 PF00364 Biotin-requiring enzyme DQU96_08465 PF09285 Elongation factor P, C-terminal DQU96_08465 PF01132 Elongation factor P (EF-P) OB domain DQU96_08465 PF08207 Elongation factor P (EF-P) KOW-like domain DQU96_08470 PF00557 Metallopeptidase family M24 DQU96_08470 PF01321 Creatinase/Prolidase N-terminal domain DQU96_08485 PF03099 Biotin/lipoate A/B protein ligase family DQU96_08490 PF00581 Rhodanese-like domain DQU96_08495 PF00266 Aminotransferase class-V DQU96_08500 PF02347 Glycine cleavage system P-protein DQU96_08505 PF08669 Glycine cleavage T-protein C-terminal barrel domain DQU96_08505 PF01571 Aminomethyltransferase folate-binding domain DQU96_08510 PF01202 Shikimate kinase DQU96_08535 PF07963 Prokaryotic N-terminal methylation motif DQU96_08540 PF00482 Type II secretion system (T2SS), protein F DQU96_08545 PF00437 Type II/IV secretion system protein DQU96_08550 PF00753 Metallo-beta-lactamase superfamily DQU96_08555 PF01910 Thiamine-binding protein DQU96_08560 PF00480 ROK family DQU96_08575 PF01812 5-formyltetrahydrofolate cyclo-ligase family DQU96_08580 PF00471 Ribosomal protein L33 DQU96_08590 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain DQU96_08590 PF02777 Iron/manganese superoxide dismutases, C-terminal domain DQU96_08595 PF01475 Ferric uptake regulator family DQU96_08600 PF00950 ABC 3 transport family DQU96_08605 PF00005 ABC transporter DQU96_08610 PF01261 Xylose isomerase-like TIM barrel DQU96_08615 PF00271 Helicase conserved C-terminal domain DQU96_08615 PF00270 DEAD/DEAH box helicase DQU96_08620 PF01784 NIF3 (NGG1p interacting factor 3) DQU96_08625 PF04816 tRNA (adenine(22)-N(1))-methyltransferase DQU96_08630 PF04539 Sigma-70 region 3 DQU96_08630 PF04545 Sigma-70, region 4 DQU96_08630 PF03979 Sigma-70 factor, region 1.1 DQU96_08630 PF04542 Sigma-70 region 2 DQU96_08630 PF00140 Sigma-70 factor, region 1.2 DQU96_08635 PF08275 DNA primase catalytic core, N-terminal domain DQU96_08635 PF01807 CHC2 zinc finger DQU96_08635 PF00772 DnaB-like helicase N terminal domain DQU96_08640 PF03618 Kinase/pyrophosphorylase DQU96_08645 PF00571 CBS domain DQU96_08645 PF08279 HTH domain DQU96_08650 PF03129 Anticodon binding domain DQU96_08650 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DQU96_08655 PF11967 Recombination protein O N terminal DQU96_08655 PF02565 Recombination protein O C terminal DQU96_08660 PF01926 50S ribosome-binding GTPase DQU96_08660 PF07650 KH domain DQU96_08665 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region DQU96_08675 PF02130 Uncharacterized protein family UPF0054 DQU96_08680 PF02562 PhoH-like protein DQU96_08690 PF12127 SigmaW regulon antibacterial DQU96_08695 PF01957 NfeD-like C-terminal, partner-binding DQU96_08695 PF01972 Serine dehydrogenase proteinase DQU96_08700 PF01165 Ribosomal protein S21 DQU96_08705 PF04055 Radical SAM superfamily DQU96_08705 PF00919 Uncharacterized protein family UPF0004 DQU96_08705 PF01938 TRAM domain DQU96_08710 PF04452 RNA methyltransferase DQU96_08720 PF00226 DnaJ domain DQU96_08720 PF01556 DnaJ C terminal domain DQU96_08720 PF00684 DnaJ central domain DQU96_08725 PF00012 Hsp70 protein DQU96_08730 PF01025 GrpE DQU96_08735 PF01628 HrcA protein C terminal domain DQU96_08740 PF04055 Radical SAM superfamily DQU96_08740 PF06969 HemN C-terminal domain DQU96_08745 PF03144 Elongation factor Tu domain 2 DQU96_08745 PF00009 Elongation factor Tu GTP binding domain DQU96_08745 PF06421 GTP-binding protein LepA C-terminus DQU96_08745 PF00679 Elongation factor G C-terminus DQU96_08750 PF01649 Ribosomal protein S20 DQU96_08755 PF06144 DNA polymerase III, delta subunit DQU96_08760 PF03772 Competence protein DQU96_08760 PF13567 Domain of unknown function (DUF4131) DQU96_08760 PF00753 Metallo-beta-lactamase superfamily DQU96_08765 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region DQU96_08770 PF00575 S1 RNA binding domain DQU96_08770 PF17674 HHH domain DQU96_08770 PF16921 Tex protein YqgF-like domain DQU96_08770 PF09371 Tex-like protein N-terminal domain DQU96_08775 PF13649 Methyltransferase domain DQU96_08785 PF01966 HD domain DQU96_08790 PF01467 Cytidylyltransferase-like DQU96_08795 PF01985 CRS1 / YhbY (CRM) domain DQU96_08800 PF08501 Shikimate dehydrogenase substrate binding domain DQU96_08800 PF18317 Shikimate 5'-dehydrogenase C-terminal domain DQU96_08800 PF01488 Shikimate / quinate 5-dehydrogenase DQU96_08805 PF01926 50S ribosome-binding GTPase DQU96_08815 PF01048 Phosphorylase superfamily DQU96_08825 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain DQU96_08840 PF02661 Fic/DOC family DQU96_08840 PF12728 Helix-turn-helix domain DQU96_08845 PF01566 Natural resistance-associated macrophage protein DQU96_08850 PF03746 LamB/YcsF family DQU96_08855 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DQU96_08855 PF00289 Biotin carboxylase, N-terminal domain DQU96_08855 PF02785 Biotin carboxylase C-terminal domain DQU96_08860 PF00364 Biotin-requiring enzyme DQU96_08865 PF02626 Carboxyltransferase domain, subdomain A and B DQU96_08870 PF02682 Carboxyltransferase domain, subdomain C and D DQU96_08875 PF03449 Transcription elongation factor, N-terminal DQU96_08875 PF01272 Transcription elongation factor, GreA/GreB, C-term DQU96_08880 PF00485 Phosphoribulokinase / Uridine kinase family DQU96_08900 PF06949 Protein of unknown function (DUF1292) DQU96_08905 PF03652 Holliday junction resolvase DQU96_08910 PF06135 IreB regulatory phosphoprotein DQU96_08915 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DQU96_08915 PF01411 tRNA synthetases class II (A) DQU96_08915 PF02272 DHHA1 domain DQU96_08920 PF14490 Helix-hairpin-helix containing domain DQU96_08920 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain DQU96_08920 PF13538 UvrD-like helicase C-terminal domain DQU96_08940 PF00266 Aminotransferase class-V DQU96_08945 PF00296 Luciferase-like monooxygenase DQU96_08955 PF05532 CsbD-like DQU96_08960 PF02082 Transcriptional regulator DQU96_08965 PF16193 AAA C-terminal domain DQU96_08965 PF12002 MgsA AAA+ ATPase C terminal DQU96_08965 PF05496 Holliday junction DNA helicase RuvB P-loop domain DQU96_08970 PF00899 ThiF family DQU96_08985 PF01336 OB-fold nucleic acid binding domain DQU96_08985 PF02938 GAD domain DQU96_08985 PF00152 tRNA synthetases class II (D, K and N) DQU96_08990 PF13393 Histidyl-tRNA synthetase DQU96_08990 PF03129 Anticodon binding domain DQU96_08995 PF08239 Bacterial SH3 domain DQU96_08995 PF01520 N-acetylmuramoyl-L-alanine amidase DQU96_09000 PF02580 D-Tyr-tRNA(Tyr) deacylase DQU96_09005 PF04607 Region found in RelA / SpoT proteins DQU96_09005 PF13291 ACT domain DQU96_09005 PF02824 TGS domain DQU96_09010 PF00156 Phosphoribosyl transferase domain DQU96_09015 PF10141 Single-strand DNA-specific exonuclease, C terminal domain DQU96_09015 PF02272 DHHA1 domain DQU96_09015 PF17768 RecJ OB domain DQU96_09015 PF01368 DHH family DQU96_09020 PF02355 Protein export membrane protein DQU96_09020 PF07549 SecD/SecF GG Motif DQU96_09025 PF02699 Preprotein translocase subunit DQU96_09030 PF01702 Queuine tRNA-ribosyltransferase DQU96_09035 PF02547 Queuosine biosynthesis protein DQU96_09040 PF05496 Holliday junction DNA helicase RuvB P-loop domain DQU96_09040 PF17864 RuvB AAA lid domain DQU96_09040 PF05491 RuvB C-terminal winged helix domain DQU96_09045 PF01330 RuvA N terminal domain DQU96_09045 PF07499 RuvA, C-terminal domain DQU96_09055 PF01018 GTP1/OBG DQU96_09055 PF09269 Domain of unknown function (DUF1967) DQU96_09055 PF01926 50S ribosome-binding GTPase DQU96_09060 PF01016 Ribosomal L27 protein DQU96_09065 PF04327 Cysteine protease Prp DQU96_09070 PF00829 Ribosomal prokaryotic L21 protein DQU96_09125 PF00398 Ribosomal RNA adenine dimethylase DQU96_09140 PF00589 Phage integrase family DQU96_09145 PF02899 Phage integrase, N-terminal SAM-like domain DQU96_09145 PF00589 Phage integrase family DQU96_09150 PF04002 RadC-like JAB domain DQU96_09155 PF06750 Bacterial Peptidase A24 N-terminal domain DQU96_09155 PF01478 Type IV leader peptidase family DQU96_09165 PF08245 Mur ligase middle domain DQU96_09165 PF02875 Mur ligase family, glutamate ligase domain DQU96_09170 PF00133 tRNA synthetases class I (I, L, M and V) DQU96_09170 PF08264 Anticodon-binding domain of tRNA DQU96_09170 PF10458 Valyl tRNA synthetase tRNA binding arm DQU96_09175 PF03352 Methyladenine glycosylase DQU96_09190 PF00202 Aminotransferase class-III DQU96_09195 PF00490 Delta-aminolevulinic acid dehydratase DQU96_09205 PF03900 Porphobilinogen deaminase, C-terminal domain DQU96_09205 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain DQU96_09210 PF01578 Cytochrome C assembly protein DQU96_09215 PF01488 Shikimate / quinate 5-dehydrogenase DQU96_09215 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain DQU96_09215 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain DQU96_09220 PF01926 50S ribosome-binding GTPase DQU96_09225 PF06689 ClpX C4-type zinc finger DQU96_09225 PF07724 AAA domain (Cdc48 subfamily) DQU96_09225 PF10431 C-terminal, D2-small domain, of ClpB protein DQU96_09230 PF05697 Bacterial trigger factor protein (TF) DQU96_09230 PF05698 Bacterial trigger factor protein (TF) C-terminus DQU96_09230 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DQU96_09255 PF00453 Ribosomal protein L20 DQU96_09260 PF01632 Ribosomal protein L35 DQU96_09265 PF05198 Translation initiation factor IF-3, N-terminal domain DQU96_09265 PF00707 Translation initiation factor IF-3, C-terminal domain DQU96_09270 PF00324 Amino acid permease DQU96_09275 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DQU96_09275 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DQU96_09275 PF03129 Anticodon binding domain DQU96_09275 PF02824 TGS domain DQU96_09285 PF07319 Primosomal protein DnaI N-terminus DQU96_09285 PF01695 IstB-like ATP binding protein DQU96_09295 PF03477 ATP cone domain DQU96_09300 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain DQU96_09300 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain DQU96_09305 PF01121 Dephospho-CoA kinase DQU96_09310 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain DQU96_09310 PF06827 Zinc finger found in FPG and IleRS DQU96_09310 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain DQU96_09315 PF01367 5'-3' exonuclease, C-terminal SAM fold DQU96_09315 PF00476 DNA polymerase family A DQU96_09315 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain DQU96_09325 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DQU96_09325 PF00989 PAS fold DQU96_09325 PF16736 Single Cache-like DQU96_09325 PF00512 His Kinase A (phospho-acceptor) domain DQU96_09330 PF00072 Response regulator receiver domain DQU96_09330 PF00486 Transcriptional regulatory protein, C terminal DQU96_09340 PF00180 Isocitrate/isopropylmalate dehydrogenase DQU96_09345 PF00285 Citrate synthase, C-terminal domain DQU96_09350 PF00324 Amino acid permease DQU96_09355 PF00224 Pyruvate kinase, barrel domain DQU96_09355 PF00391 PEP-utilising enzyme, mobile domain DQU96_09355 PF02887 Pyruvate kinase, alpha/beta domain DQU96_09360 PF00365 Phosphofructokinase DQU96_09365 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit DQU96_09370 PF17848 Acetyl-coA carboxylase zinc finger domain DQU96_09370 PF01039 Carboxyl transferase domain DQU96_09375 PF00390 Malic enzyme, N-terminal domain DQU96_09375 PF03949 Malic enzyme, NAD binding domain DQU96_09380 PF14579 Helix-hairpin-helix motif DQU96_09380 PF17657 Bacterial DNA polymerase III alpha subunit finger domain DQU96_09380 PF07733 Bacterial DNA polymerase III alpha NTPase domain DQU96_09380 PF02811 PHP domain DQU96_09380 PF01336 OB-fold nucleic acid binding domain DQU96_09385 PF02272 DHHA1 domain DQU96_09385 PF01368 DHH family DQU96_09390 PF00571 CBS domain DQU96_09390 PF03061 Thioesterase superfamily DQU96_09390 PF00392 Bacterial regulatory proteins, gntR family DQU96_09390 PF07085 DRTGG domain DQU96_09405 PF01321 Creatinase/Prolidase N-terminal domain DQU96_09405 PF00557 Metallopeptidase family M24 DQU96_09415 PF01262 Alanine dehydrogenase/PNT, C-terminal domain DQU96_09415 PF05222 Alanine dehydrogenase/PNT, N-terminal domain DQU96_09420 PF00582 Universal stress protein family DQU96_09425 PF00871 Acetokinase family DQU96_09430 PF02384 N-6 DNA Methylase DQU96_09435 PF08534 Redoxin DQU96_09440 PF01925 Sulfite exporter TauE/SafE DQU96_09445 PF02926 THUMP domain DQU96_09445 PF02568 Thiamine biosynthesis protein (ThiI) DQU96_09450 PF00266 Aminotransferase class-V DQU96_09460 PF06160 Septation ring formation regulator, EzrA DQU96_09465 PF13185 GAF domain DQU96_09475 PF00163 Ribosomal protein S4/S9 N-terminal domain DQU96_09475 PF01479 S4 domain DQU96_09485 PF03009 Glycerophosphoryl diester phosphodiesterase family DQU96_09490 PF02566 OsmC-like protein DQU96_09495 PF00266 Aminotransferase class-V DQU96_09500 PF01842 ACT domain DQU96_09500 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DQU96_09500 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DQU96_09515 PF00367 phosphotransferase system, EIIB DQU96_09515 PF02378 Phosphotransferase system, EIIC DQU96_09520 PF01553 Acyltransferase DQU96_09525 PF13180 PDZ domain DQU96_09530 PF00579 tRNA synthetases class I (W and Y) DQU96_09530 PF01479 S4 domain DQU96_09535 PF00912 Transglycosylase DQU96_09535 PF00905 Penicillin binding protein transpeptidase domain DQU96_09545 PF04650 YSIRK type signal peptide DQU96_09545 PF05031 Iron Transport-associated domain DQU96_09555 PF01268 Formate--tetrahydrofolate ligase DQU96_09560 PF00501 AMP-binding enzyme DQU96_09560 PF13193 AMP-binding enzyme C-terminal domain DQU96_09565 PF00583 Acetyltransferase (GNAT) family DQU96_09570 PF00850 Histone deacetylase domain DQU96_09575 PF00356 Bacterial regulatory proteins, lacI family DQU96_09585 PF01817 Chorismate mutase type II DQU96_09585 PF00793 DAHP synthetase I family DQU96_09600 PF06103 Bacterial protein of unknown function (DUF948) DQU96_09605 PF01225 Mur ligase family, catalytic domain DQU96_09605 PF02875 Mur ligase family, glutamate ligase domain DQU96_09605 PF08245 Mur ligase middle domain DQU96_09610 PF09397 Ftsk gamma domain DQU96_09610 PF01580 FtsK/SpoIIIE family DQU96_09610 PF17854 FtsK alpha domain DQU96_09615 PF01588 Putative tRNA binding domain DQU96_09615 PF14794 Domain of unknown function (DUF4479) DQU96_09620 PF07285 Protein of unknown function (DUF1444) DQU96_09625 PF00085 Thioredoxin DQU96_09630 PF05343 M42 glutamyl aminopeptidase DQU96_09640 PF00753 Metallo-beta-lactamase superfamily DQU96_09645 PF02390 Putative methyltransferase DQU96_09650 PF01636 Phosphotransferase enzyme family DQU96_09655 PF01063 Amino-transferase class IV DQU96_09660 PF01546 Peptidase family M20/M25/M40 DQU96_09670 PF01479 S4 domain DQU96_09670 PF00849 RNA pseudouridylate synthase DQU96_09675 PF14667 Polysaccharide biosynthesis C-terminal domain DQU96_09675 PF01943 Polysaccharide biosynthesis protein DQU96_09685 PF04650 YSIRK type signal peptide DQU96_09685 PF01468 GA module DQU96_09685 PF07564 Domain of Unknown Function (DUF1542) DQU96_09695 PF08264 Anticodon-binding domain of tRNA DQU96_09695 PF00133 tRNA synthetases class I (I, L, M and V) DQU96_09695 PF13603 Leucyl-tRNA synthetase, Domain 2 DQU96_09695 PF09334 tRNA synthetases class I (M) DQU96_09700 PF07690 Major Facilitator Superfamily DQU96_09705 PF04055 Radical SAM superfamily DQU96_09705 PF16199 Radical_SAM C-terminal domain DQU96_09710 PF06962 Putative rRNA methylase DQU96_09715 PF01047 MarR family DQU96_09720 PF12146 Serine aminopeptidase, S33 DQU96_09730 PF01619 Proline dehydrogenase DQU96_09735 PF00885 6,7-dimethyl-8-ribityllumazine synthase DQU96_09740 PF00925 GTP cyclohydrolase II DQU96_09740 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase DQU96_09745 PF00677 Lumazine binding domain DQU96_09750 PF01872 RibD C-terminal domain DQU96_09750 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region DQU96_09760 PF01022 Bacterial regulatory protein, arsR family DQU96_09765 PF02040 Arsenical pump membrane protein DQU96_09770 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase DQU96_09770 PF13457 GW (Gly-Tryp) dipeptide domain DQU96_09780 PF04542 Sigma-70 region 2 DQU96_09800 PF00923 Transaldolase/Fructose-6-phosphate aldolase DQU96_09810 PF02537 CrcB-like protein, Camphor Resistance (CrcB) DQU96_09815 PF02537 CrcB-like protein, Camphor Resistance (CrcB) DQU96_09825 PF00248 Aldo/keto reductase family DQU96_09835 PF02773 S-adenosylmethionine synthetase, C-terminal domain DQU96_09835 PF00438 S-adenosylmethionine synthetase, N-terminal domain DQU96_09835 PF02772 S-adenosylmethionine synthetase, central domain DQU96_09840 PF01293 Phosphoenolpyruvate carboxykinase DQU96_09845 PF00326 Prolyl oligopeptidase family DQU96_09850 PF00293 NUDIX domain DQU96_09850 PF09297 NADH pyrophosphatase zinc ribbon domain DQU96_09855 PF01809 Putative membrane protein insertion efficiency factor DQU96_09865 PF00501 AMP-binding enzyme DQU96_09865 PF13193 AMP-binding enzyme C-terminal domain DQU96_09930 PF02384 N-6 DNA Methylase DQU96_09930 PF12161 HsdM N-terminal domain DQU96_09955 PF00089 Trypsin DQU96_09960 PF00089 Trypsin DQU96_09965 PF00089 Trypsin DQU96_09995 PF07968 Leukocidin/Hemolysin toxin family DQU96_10000 PF07968 Leukocidin/Hemolysin toxin family DQU96_10030 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain DQU96_10035 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain DQU96_10040 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain DQU96_10045 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain DQU96_10050 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain DQU96_10055 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain DQU96_10060 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain DQU96_10125 PF01208 Uroporphyrinogen decarboxylase (URO-D) DQU96_10145 PF00005 ABC transporter DQU96_10150 PF01230 HIT domain DQU96_10165 PF00639 PPIC-type PPIASE domain DQU96_10170 PF01966 HD domain DQU96_10180 PF00149 Calcineurin-like phosphoesterase DQU96_10195 PF06133 Control of competence regulator ComK, YlbF/YmcA DQU96_10200 PF04286 Protein of unknown function (DUF445) DQU96_10210 PF00072 Response regulator receiver domain DQU96_10210 PF00196 Bacterial regulatory proteins, luxR family DQU96_10215 PF07730 Histidine kinase DQU96_10215 PF13185 GAF domain DQU96_10220 PF00849 RNA pseudouridylate synthase DQU96_10220 PF01479 S4 domain DQU96_10225 PF00206 Lyase DQU96_10225 PF10415 Fumarase C C-terminus DQU96_10245 PF00588 SpoU rRNA Methylase family DQU96_10250 PF08331 Domain of unknown function (DUF1730) DQU96_10255 PF00005 ABC transporter DQU96_10260 PF00528 Binding-protein-dependent transport system inner membrane component DQU96_10425 PF01475 Ferric uptake regulator family DQU96_10430 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DQU96_10430 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DQU96_10435 PF00578 AhpC/TSA family DQU96_10440 PF00202 Aminotransferase class-III DQU96_10445 PF06081 Aromatic acid exporter family member 1 DQU96_10455 PF00005 ABC transporter DQU96_10455 PF00664 ABC transporter transmembrane region DQU96_10460 PF04167 Protein of unknown function (DUF402) DQU96_10465 PF14815 NUDIX domain DQU96_10465 PF00730 HhH-GPD superfamily base excision DNA repair protein DQU96_10465 PF00633 Helix-hairpin-helix motif DQU96_10470 PF04307 LexA-binding, inner membrane-associated putative hydrolase DQU96_10485 PF01476 LysM domain DQU96_10485 PF00005 ABC transporter DQU96_10495 PF02631 RecX family DQU96_10500 PF00912 Transglycosylase DQU96_10505 PF01965 DJ-1/PfpI family DQU96_10515 PF04055 Radical SAM superfamily DQU96_10515 PF08756 YfkB-like domain DQU96_10520 PF03061 Thioesterase superfamily DQU96_10525 PF02073 Thermophilic metalloprotease (M29) DQU96_10530 PF06569 Protein of unknown function (DUF1128) DQU96_10535 PF01451 Low molecular weight phosphotyrosine protein phosphatase DQU96_10545 PF03631 Virulence factor BrkB DQU96_10550 PF00072 Response regulator receiver domain DQU96_10550 PF00196 Bacterial regulatory proteins, luxR family DQU96_10555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DQU96_10555 PF07730 Histidine kinase DQU96_10570 PF00557 Metallopeptidase family M24 DQU96_10575 PF06081 Aromatic acid exporter family member 1 DQU96_10595 PF07685 CobB/CobQ-like glutamine amidotransferase domain DQU96_10600 PF08353 Domain of unknown function (DUF1727) DQU96_10600 PF08245 Mur ligase middle domain DQU96_10605 PF00210 Ferritin-like domain DQU96_10620 PF00817 impB/mucB/samB family DQU96_10620 PF11799 impB/mucB/samB family C-terminal domain DQU96_10630 PF05958 tRNA (Uracil-5-)-methyltransferase DQU96_10635 PF00781 Diacylglycerol kinase catalytic domain DQU96_10645 PF02934 GatB/GatE catalytic domain DQU96_10645 PF02637 GatB domain DQU96_10650 PF01425 Amidase DQU96_10655 PF02686 Glu-tRNAGln amidotransferase C subunit DQU96_10660 PF00474 Sodium:solute symporter family DQU96_10665 PF07537 CamS sex pheromone cAM373 precursor DQU96_10670 PF03120 NAD-dependent DNA ligase OB-fold domain DQU96_10670 PF01653 NAD-dependent DNA ligase adenylation domain DQU96_10670 PF00533 BRCA1 C Terminus (BRCT) domain DQU96_10670 PF03119 NAD-dependent DNA ligase C4 zinc finger domain DQU96_10670 PF12826 Helix-hairpin-helix motif DQU96_10675 PF00580 UvrD/REP helicase N-terminal domain DQU96_10675 PF13361 UvrD-like helicase C-terminal domain DQU96_10680 PF01884 PcrB family DQU96_10685 PF01371 Trp repressor protein DQU96_10690 PF10397 Adenylosuccinate lyase C-terminus DQU96_10690 PF00206 Lyase DQU96_10700 PF05543 Staphopain peptidase C47 DQU96_10700 PF14731 Staphopain proregion DQU96_10710 PF14044 NETI protein DQU96_10715 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) DQU96_10720 PF02540 NAD synthase DQU96_10725 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain DQU96_10725 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain DQU96_10725 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family DQU96_10730 PF02898 Nitric oxide synthase, oxygenase domain DQU96_10735 PF01842 ACT domain DQU96_10735 PF00800 Prephenate dehydratase DQU96_10755 PF00857 Isochorismatase family DQU96_10760 PF02833 DHHA2 domain DQU96_10760 PF01368 DHH family DQU96_10770 PF00171 Aldehyde dehydrogenase family DQU96_10775 PF10282 Lactonase, 7-bladed beta-propeller DQU96_10825 PF00005 ABC transporter DQU96_10835 PF00005 ABC transporter DQU96_10840 PF00392 Bacterial regulatory proteins, gntR family DQU96_10860 PF03642 MAP domain DQU96_10865 PF03642 MAP domain DQU96_10870 PF03372 Endonuclease/Exonuclease/phosphatase family DQU96_10890 PF11546 Staphylococcal complement inhibitor SCIN DQU96_10895 PF11434 Chemotaxis-inhibiting protein CHIPS DQU96_10915 PF02821 Staphylokinase/Streptokinase family DQU96_10920 PF08460 Bacterial SH3 domain DQU96_10920 PF01510 N-acetylmuramoyl-L-alanine amidase DQU96_10920 PF05257 CHAP domain DQU96_10940 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain DQU96_10970 PF04225 Opacity-associated protein A LysM-like domain DQU96_10970 PF01551 Peptidase family M23 DQU96_11020 PF00574 Clp protease DQU96_11110 PF00436 Single-strand binding protein family DQU96_11190 PF00717 Peptidase S24-like DQU96_11190 PF01726 LexA DNA binding domain DQU96_11210 PF00535 Glycosyl transferase family 2 DQU96_11230 PF07968 Leukocidin/Hemolysin toxin family DQU96_11235 PF07968 Leukocidin/Hemolysin toxin family DQU96_11240 PF07687 Peptidase dimerisation domain DQU96_11240 PF01546 Peptidase family M20/M25/M40 DQU96_11245 PF02386 Cation transport protein DQU96_11295 PF10668 Phage terminase small subunit DQU96_11295 PF03592 Terminase small subunit DQU96_11380 PF00589 Phage integrase family DQU96_11380 PF14659 Phage integrase, N-terminal SAM-like domain DQU96_11385 PF00118 TCP-1/cpn60 chaperonin family DQU96_11390 PF00166 Chaperonin 10 Kd subunit DQU96_11395 PF02517 CPBP intramembrane metalloprotease DQU96_11410 PF00795 Carbon-nitrogen hydrolase DQU96_11415 PF05372 Delta lysin family DQU96_11420 PF04647 Accessory gene regulator B DQU96_11435 PF04397 LytTr DNA-binding domain DQU96_11435 PF00072 Response regulator receiver domain DQU96_11445 PF00294 pfkB family carbohydrate kinase DQU96_11450 PF00251 Glycosyl hydrolases family 32 N-terminal domain DQU96_11450 PF08244 Glycosyl hydrolases family 32 C terminal DQU96_11455 PF13407 Periplasmic binding protein domain DQU96_11455 PF00356 Bacterial regulatory proteins, lacI family DQU96_11460 PF00909 Ammonium Transporter Family DQU96_11465 PF01206 Sulfurtransferase TusA DQU96_11470 PF04143 Sulphur transport DQU96_11475 PF06971 Putative DNA-binding protein N-terminus DQU96_11475 PF02629 CoA binding domain DQU96_11480 PF00005 ABC transporter DQU96_11480 PF16326 ABC transporter C-terminal domain DQU96_11480 PF12848 ABC transporter DQU96_11490 PF05192 MutS domain III DQU96_11490 PF05190 MutS family domain IV DQU96_11490 PF00488 MutS domain V DQU96_11490 PF05188 MutS domain II DQU96_11490 PF01624 MutS domain I DQU96_11495 PF00814 Glycoprotease family DQU96_11500 PF00583 Acetyltransferase (GNAT) family DQU96_11505 PF00814 Glycoprotease family DQU96_11510 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE DQU96_11520 PF00920 Dehydratase family DQU96_11525 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DQU96_11525 PF00205 Thiamine pyrophosphate enzyme, central domain DQU96_11525 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DQU96_11535 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain DQU96_11535 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain DQU96_11540 PF08502 LeuA allosteric (dimerisation) domain DQU96_11540 PF00682 HMGL-like DQU96_11545 PF00180 Isocitrate/isopropylmalate dehydrogenase DQU96_11550 PF00330 Aconitase family (aconitate hydratase) DQU96_11555 PF00694 Aconitase C-terminal domain DQU96_11560 PF00291 Pyridoxal-phosphate dependent enzyme DQU96_11560 PF00585 C-terminal regulatory domain of Threonine dehydratase DQU96_11595 PF10263 SprT-like family DQU96_11595 PF17283 SprT-like zinc ribbon domain DQU96_11600 PF17674 HHH domain DQU96_11600 PF09371 Tex-like protein N-terminal domain DQU96_11600 PF00575 S1 RNA binding domain DQU96_11600 PF16921 Tex protein YqgF-like domain DQU96_11605 PF04542 Sigma-70 region 2 DQU96_11605 PF04539 Sigma-70 region 3 DQU96_11605 PF04545 Sigma-70, region 4 DQU96_11610 PF13581 Histidine kinase-like ATPase domain DQU96_11615 PF01740 STAS domain DQU96_11620 PF07228 Stage II sporulation protein E (SpoIIE) DQU96_11620 PF08673 Phosphoserine phosphatase RsbU, N-terminal domain DQU96_11630 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system DQU96_11640 PF01168 Alanine racemase, N-terminal domain DQU96_11640 PF00842 Alanine racemase, C-terminal domain DQU96_11645 PF01648 4'-phosphopantetheinyl transferase superfamily DQU96_11655 PF03703 Bacterial PH domain DQU96_11665 PF02669 K+-transporting ATPase, c chain DQU96_11675 PF03814 Potassium-transporting ATPase A subunit DQU96_11685 PF13493 Domain of unknown function (DUF4118) DQU96_11685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DQU96_11685 PF00512 His Kinase A (phospho-acceptor) domain DQU96_11685 PF02702 Osmosensitive K+ channel His kinase sensor domain DQU96_11690 PF00072 Response regulator receiver domain DQU96_11690 PF00486 Transcriptional regulatory protein, C terminal DQU96_11705 PF00270 DEAD/DEAH box helicase DQU96_11705 PF00271 Helicase conserved C-terminal domain DQU96_11710 PF08245 Mur ligase middle domain DQU96_11710 PF01225 Mur ligase family, catalytic domain DQU96_11710 PF02875 Mur ligase family, glutamate ligase domain DQU96_11715 PF01820 D-ala D-ala ligase N-terminus DQU96_11715 PF07478 D-ala D-ala ligase C-terminus DQU96_11720 PF01098 Cell cycle protein DQU96_11735 PF02583 Metal-sensitive transcriptional repressor DQU96_11740 PF13396 Phospholipase_D-nuclease N-terminal DQU96_11740 PF13091 PLD-like domain DQU96_11745 PF01966 HD domain DQU96_11765 PF02096 60Kd inner membrane protein DQU96_11770 PF02581 Thiamine monophosphate synthase DQU96_11775 PF02110 Hydroxyethylthiazole kinase family DQU96_11780 PF08543 Phosphomethylpyrimidine kinase DQU96_11785 PF03070 TENA/THI-4/PQQC family DQU96_11790 PF06737 Transglycosylase-like domain DQU96_11795 PF00436 Single-strand binding protein family DQU96_11805 PF07977 FabA-like domain DQU96_11810 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) DQU96_11825 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain DQU96_11825 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain DQU96_11830 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DQU96_11830 PF02874 ATP synthase alpha/beta family, beta-barrel domain DQU96_11835 PF00231 ATP synthase DQU96_11840 PF02874 ATP synthase alpha/beta family, beta-barrel domain DQU96_11840 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DQU96_11840 PF00306 ATP synthase alpha/beta chain, C terminal domain DQU96_11845 PF00213 ATP synthase delta (OSCP) subunit DQU96_11850 PF00430 ATP synthase B/B' CF(0) DQU96_11855 PF00137 ATP synthase subunit C DQU96_11860 PF00119 ATP synthase A chain DQU96_11870 PF02350 UDP-N-acetylglucosamine 2-epimerase DQU96_11880 PF00464 Serine hydroxymethyltransferase DQU96_11885 PF04260 Protein of unknown function (DUF436) DQU96_11890 PF01451 Low molecular weight phosphotyrosine protein phosphatase DQU96_11895 PF03481 Putative GTP-binding controlling metal-binding DQU96_11895 PF01300 Telomere recombination DQU96_11900 PF05175 Methyltransferase small domain DQU96_11900 PF17827 PrmC N-terminal domain DQU96_11905 PF00472 RF-1 domain DQU96_11905 PF03462 PCRF domain DQU96_11910 PF00265 Thymidine kinase DQU96_11920 PF01197 Ribosomal protein L31 DQU96_11925 PF07497 Rho termination factor, RNA-binding domain DQU96_11925 PF07498 Rho termination factor, N-terminal domain DQU96_11925 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DQU96_11930 PF00171 Aldehyde dehydrogenase family DQU96_11940 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) DQU96_11945 PF01116 Fructose-bisphosphate aldolase class-II DQU96_11955 PF06418 CTP synthase N-terminus DQU96_11955 PF00117 Glutamine amidotransferase class-I DQU96_11960 PF05066 HB1, ASXL, restriction endonuclease HTH domain DQU96_11970 PF03630 Fumble DQU96_11990 PF02664 S-Ribosylhomocysteinase (LuxS) DQU96_12000 PF00591 Glycosyl transferase family, a/b domain DQU96_12000 PF02885 Glycosyl transferase family, helical bundle domain DQU96_12000 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain DQU96_12010 PF01791 DeoC/LacD family aldolase DQU96_12015 PF01048 Phosphorylase superfamily DQU96_12020 PF00210 Ferritin-like domain DQU96_12040 PF01238 Phosphomannose isomerase type I DQU96_12045 PF13460 NAD(P)H-binding DQU96_12050 PF01022 Bacterial regulatory protein, arsR family DQU96_12055 PF16916 Dimerisation domain of Zinc Transporter DQU96_12055 PF01545 Cation efflux family DQU96_12090 PF00005 ABC transporter DQU96_12095 PF01380 SIS domain DQU96_12100 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DQU96_12100 PF02378 Phosphotransferase system, EIIC DQU96_12105 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DQU96_12105 PF05043 Mga helix-turn-helix domain DQU96_12105 PF08279 HTH domain DQU96_12105 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DQU96_12105 PF00874 PRD domain DQU96_12110 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DQU96_12115 PF08125 Mannitol dehydrogenase C-terminal domain DQU96_12115 PF01232 Mannitol dehydrogenase Rossmann domain DQU96_12120 PF01468 GA module DQU96_12120 PF07564 Domain of Unknown Function (DUF1542) DQU96_12125 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DQU96_12125 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DQU96_12125 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DQU96_12125 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DQU96_12135 PF02457 DisA bacterial checkpoint controller nucleotide-binding DQU96_12140 PF00491 Arginase family DQU96_12205 PF10609 NUBPL iron-transfer P-loop NTPase DQU96_12210 PF07690 Major Facilitator Superfamily DQU96_12215 PF17080 Multidrug Resistance efflux pump DQU96_12220 PF07690 Major Facilitator Superfamily DQU96_12225 PF03006 Haemolysin-III related DQU96_12230 PF01704 UTP--glucose-1-phosphate uridylyltransferase DQU96_12235 PF04307 LexA-binding, inner membrane-associated putative hydrolase DQU96_12250 PF01032 FecCD transport family DQU96_12255 PF01032 FecCD transport family DQU96_12260 PF01497 Periplasmic binding protein DQU96_12270 PF01168 Alanine racemase, N-terminal domain DQU96_12275 PF06276 Ferric iron reductase FhuF-like transporter DQU96_12275 PF04183 IucA / IucC family DQU96_12280 PF05977 Transmembrane secretion effector DQU96_12290 PF03780 Asp23 family, cell envelope-related function DQU96_12305 PF02028 BCCT, betaine/carnitine/choline family transporter DQU96_12310 PF00107 Zinc-binding dehydrogenase DQU96_12310 PF08240 Alcohol dehydrogenase GroES-like domain DQU96_12315 PF00107 Zinc-binding dehydrogenase DQU96_12315 PF16884 N-terminal domain of oxidoreductase DQU96_12325 PF00232 Glycosyl hydrolase family 1 DQU96_12330 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DQU96_12330 PF02378 Phosphotransferase system, EIIC DQU96_12335 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit DQU96_12340 PF01791 DeoC/LacD family aldolase DQU96_12345 PF00294 pfkB family carbohydrate kinase DQU96_12350 PF02502 Ribose/Galactose Isomerase DQU96_12355 PF02502 Ribose/Galactose Isomerase DQU96_12360 PF00455 DeoR C terminal sensor domain DQU96_12360 PF08220 DeoR-like helix-turn-helix domain DQU96_12365 PF02146 Sir2 family DQU96_12380 PF00248 Aldo/keto reductase family DQU96_12385 PF13411 MerR HTH family regulatory protein DQU96_12395 PF02278 Polysaccharide lyase family 8, super-sandwich domain DQU96_12395 PF08124 Polysaccharide lyase family 8, N terminal alpha-helical domain DQU96_12395 PF02884 Polysaccharide lyase family 8, C-terminal beta-sandwich domain DQU96_12405 PF05116 Sucrose-6F-phosphate phosphohydrolase DQU96_12415 PF03306 Alpha-acetolactate decarboxylase DQU96_12420 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DQU96_12420 PF00205 Thiamine pyrophosphate enzyme, central domain DQU96_12420 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DQU96_12430 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) DQU96_12470 PF00380 Ribosomal protein S9/S16 DQU96_12475 PF00572 Ribosomal protein L13 DQU96_12480 PF01416 tRNA pseudouridine synthase DQU96_12485 PF02361 Cobalt transport protein DQU96_12490 PF00005 ABC transporter DQU96_12495 PF00005 ABC transporter DQU96_12500 PF01196 Ribosomal protein L17 DQU96_12505 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain DQU96_12505 PF01000 RNA polymerase Rpb3/RpoA insert domain DQU96_12505 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain DQU96_12510 PF00411 Ribosomal protein S11 DQU96_12515 PF00416 Ribosomal protein S13/S18 DQU96_12520 PF00444 Ribosomal protein L36 DQU96_12525 PF01176 Translation initiation factor 1A / IF-1 DQU96_12530 PF05191 Adenylate kinase, active site lid DQU96_12535 PF00344 SecY translocase DQU96_12540 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A DQU96_12545 PF00327 Ribosomal protein L30p/L7e DQU96_12550 PF00333 Ribosomal protein S5, N-terminal domain DQU96_12550 PF03719 Ribosomal protein S5, C-terminal domain DQU96_12555 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast DQU96_12560 PF00347 Ribosomal protein L6 DQU96_12565 PF00410 Ribosomal protein S8 DQU96_12570 PF00253 Ribosomal protein S14p/S29e DQU96_12575 PF00673 ribosomal L5P family C-terminus DQU96_12575 PF00281 Ribosomal protein L5 DQU96_12580 PF00467 KOW motif DQU96_12580 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 DQU96_12585 PF00238 Ribosomal protein L14p/L23e DQU96_12590 PF00366 Ribosomal protein S17 DQU96_12595 PF00831 Ribosomal L29 protein DQU96_12600 PF00252 Ribosomal protein L16p/L10e DQU96_12605 PF00189 Ribosomal protein S3, C-terminal domain DQU96_12605 PF07650 KH domain DQU96_12610 PF00237 Ribosomal protein L22p/L17e DQU96_12615 PF00203 Ribosomal protein S19 DQU96_12620 PF00181 Ribosomal Proteins L2, RNA binding domain DQU96_12620 PF03947 Ribosomal Proteins L2, C-terminal domain DQU96_12625 PF00276 Ribosomal protein L23 DQU96_12630 PF00573 Ribosomal protein L4/L1 family DQU96_12635 PF00297 Ribosomal protein L3 DQU96_12640 PF00338 Ribosomal protein S10p/S20e DQU96_12650 PF00860 Permease family DQU96_12655 PF01751 Toprim domain DQU96_12655 PF01131 DNA topoisomerase DQU96_12670 PF06800 Sugar transport protein DQU96_12700 PF00873 AcrB/AcrD/AcrF family DQU96_12705 PF02388 FemAB family DQU96_12720 PF01047 MarR family DQU96_12730 PF01047 MarR family DQU96_12750 PF06463 Molybdenum Cofactor Synthesis C DQU96_12750 PF04055 Radical SAM superfamily DQU96_12755 PF12804 MobA-like NTP transferase domain DQU96_12760 PF02597 ThiS family DQU96_12765 PF02391 MoaE protein DQU96_12770 PF03205 Molybdopterin guanine dinucleotide synthesis protein B DQU96_12775 PF03453 MoeA N-terminal region (domain I and II) DQU96_12775 PF03454 MoeA C-terminal region (domain IV) DQU96_12775 PF00994 Probable molybdopterin binding domain DQU96_12780 PF01967 MoaC family DQU96_12785 PF00994 Probable molybdopterin binding domain DQU96_12790 PF00899 ThiF family DQU96_12795 PF00005 ABC transporter DQU96_12795 PF03459 TOBE domain DQU96_12800 PF00528 Binding-protein-dependent transport system inner membrane component DQU96_12810 PF02634 FdhD/NarQ family DQU96_12820 PF02632 BioY family DQU96_12825 PF01156 Inosine-uridine preferring nucleoside hydrolase DQU96_12835 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DQU96_12835 PF08028 Acyl-CoA dehydrogenase, C-terminal domain DQU96_12835 PF02770 Acyl-CoA dehydrogenase, middle domain DQU96_12840 PF03253 Urea transporter DQU96_12845 PF00547 Urease, gamma subunit DQU96_12850 PF00699 Urease beta subunit DQU96_12855 PF00449 Urease alpha-subunit, N-terminal domain DQU96_12855 PF01979 Amidohydrolase family DQU96_12860 PF05194 UreE urease accessory protein, C-terminal domain DQU96_12860 PF02814 UreE urease accessory protein, N-terminal domain DQU96_12865 PF01730 UreF DQU96_12870 PF02492 CobW/HypB/UreG, nucleotide-binding domain DQU96_12875 PF01774 UreD urease accessory protein DQU96_12905 PF05257 CHAP domain DQU96_12915 PF03553 Na+/H+ antiporter family DQU96_12920 PF02558 Ketopantoate reductase PanE/ApbA DQU96_12920 PF02317 NAD/NADP octopine/nopaline dehydrogenase, alpha-helical domain DQU96_12930 PF05257 CHAP domain DQU96_12940 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DQU96_12940 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DQU96_12945 PF01494 FAD binding domain DQU96_12950 PF13457 GW (Gly-Tryp) dipeptide domain DQU96_12950 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase DQU96_12965 PF01568 Molydopterin dinucleotide binding domain DQU96_12965 PF12838 4Fe-4S dicluster domain DQU96_12965 PF04879 Molybdopterin oxidoreductase Fe4S4 domain DQU96_12965 PF00384 Molybdopterin oxidoreductase DQU96_12965 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region DQU96_12970 PF03816 Cell envelope-related transcriptional attenuator domain DQU96_12985 PF02517 CPBP intramembrane metalloprotease DQU96_13000 PF00324 Amino acid permease DQU96_13020 PF13419 Haloacid dehalogenase-like hydrolase DQU96_13025 PF01758 Sodium Bile acid symporter family DQU96_13035 PF00367 phosphotransferase system, EIIB DQU96_13035 PF02378 Phosphotransferase system, EIIC DQU96_13040 PF01380 SIS domain DQU96_13040 PF01418 Helix-turn-helix domain, rpiR family DQU96_13065 PF07687 Peptidase dimerisation domain DQU96_13065 PF01546 Peptidase family M20/M25/M40 DQU96_13070 PF01979 Amidohydrolase family DQU96_13075 PF17391 Urocanase N-terminal domain DQU96_13075 PF17392 Urocanase C-terminal domain DQU96_13075 PF01175 Urocanase Rossmann-like domain DQU96_13080 PF03466 LysR substrate binding domain DQU96_13080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DQU96_13085 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DQU96_13090 PF00491 Arginase family DQU96_13100 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) DQU96_13105 PF03475 3-alpha domain DQU96_13105 PF03473 MOSC domain DQU96_13115 PF02694 Uncharacterised BCR, YnfA/UPF0060 family DQU96_13135 PF05656 Protein of unknown function (DUF805) DQU96_13145 PF02245 Methylpurine-DNA glycosylase (MPG) DQU96_13155 PF03616 Sodium/glutamate symporter DQU96_13160 PF01070 FMN-dependent dehydrogenase DQU96_13165 PF01544 CorA-like Mg2+ transporter protein DQU96_13180 PF00934 PE family DQU96_13180 PF07859 alpha/beta hydrolase fold DQU96_13190 PF07690 Major Facilitator Superfamily DQU96_13205 PF07690 Major Facilitator Superfamily DQU96_13225 PF12802 MarR family DQU96_13235 PF00005 ABC transporter DQU96_13240 PF02687 FtsX-like permease family DQU96_13245 PF00072 Response regulator receiver domain DQU96_13245 PF00486 Transcriptional regulatory protein, C terminal DQU96_13250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DQU96_13250 PF00672 HAMP domain DQU96_13250 PF00512 His Kinase A (phospho-acceptor) domain DQU96_13255 PF04397 LytTr DNA-binding domain DQU96_13265 PF06039 Malate:quinone oxidoreductase (Mqo) DQU96_13270 PF02652 L-lactate permease DQU96_13275 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase DQU96_13285 PF13673 Acetyltransferase (GNAT) domain DQU96_13290 PF08240 Alcohol dehydrogenase GroES-like domain DQU96_13290 PF00107 Zinc-binding dehydrogenase DQU96_13300 PF07992 Pyridine nucleotide-disulphide oxidoreductase DQU96_13335 PF02378 Phosphotransferase system, EIIC DQU96_13335 PF00367 phosphotransferase system, EIIB DQU96_13350 PF16242 Pyridoxamine 5'-phosphate oxidase like DQU96_13360 PF00375 Sodium:dicarboxylate symporter family DQU96_13370 PF01047 MarR family DQU96_13375 PF00011 Hsp20/alpha crystallin family DQU96_13380 PF07690 Major Facilitator Superfamily DQU96_13390 PF07739 TipAS antibiotic-recognition domain DQU96_13390 PF13411 MerR HTH family regulatory protein DQU96_13395 PF00196 Bacterial regulatory proteins, luxR family DQU96_13395 PF00072 Response regulator receiver domain DQU96_13400 PF07730 Histidine kinase DQU96_13400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DQU96_13410 PF02665 Nitrate reductase gamma subunit DQU96_13420 PF14711 Respiratory nitrate reductase beta C-terminal DQU96_13420 PF13247 4Fe-4S dicluster domain DQU96_13425 PF14710 Respiratory nitrate reductase alpha N-terminal DQU96_13425 PF01568 Molydopterin dinucleotide binding domain DQU96_13425 PF00384 Molybdopterin oxidoreductase DQU96_13430 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DQU96_13435 PF00355 Rieske [2Fe-2S] domain DQU96_13440 PF04324 BFD-like [2Fe-2S] binding domain DQU96_13440 PF07992 Pyridine nucleotide-disulphide oxidoreductase DQU96_13440 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain DQU96_13440 PF01077 Nitrite and sulphite reductase 4Fe-4S domain DQU96_13440 PF18267 Rubredoxin NAD+ reductase C-terminal domain DQU96_13450 PF00583 Acetyltransferase (GNAT) family DQU96_13455 PF01226 Formate/nitrite transporter DQU96_13470 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment DQU96_13470 PF01297 Zinc-uptake complex component A periplasmic DQU96_13480 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system DQU96_13505 PF02388 FemAB family DQU96_13510 PF00005 ABC transporter DQU96_13515 PF00528 Binding-protein-dependent transport system inner membrane component DQU96_13520 PF00497 Bacterial extracellular solute-binding proteins, family 3 DQU96_13525 PF07690 Major Facilitator Superfamily DQU96_13540 PF00300 Histidine phosphatase superfamily (branch 1) DQU96_13545 PF16916 Dimerisation domain of Zinc Transporter DQU96_13545 PF01545 Cation efflux family DQU96_13555 PF11621 C3 binding domain 4 of IgG-bind protein SBI DQU96_13555 PF02216 B domain DQU96_13570 PF07968 Leukocidin/Hemolysin toxin family DQU96_13575 PF07968 Leukocidin/Hemolysin toxin family DQU96_13580 PF07968 Leukocidin/Hemolysin toxin family DQU96_13590 PF03744 6-carboxyhexanoate--CoA ligase DQU96_13595 PF00155 Aminotransferase class I and II DQU96_13600 PF04055 Radical SAM superfamily DQU96_13600 PF06968 Biotin and Thiamin Synthesis associated domain DQU96_13605 PF00202 Aminotransferase class-III DQU96_13625 PF00005 ABC transporter DQU96_13625 PF00664 ABC transporter transmembrane region DQU96_13630 PF00664 ABC transporter transmembrane region DQU96_13630 PF00005 ABC transporter DQU96_13630 PF08021 Siderophore-interacting FAD-binding domain DQU96_13630 PF04954 Siderophore-interacting protein DQU96_13650 PF02595 Glycerate kinase family DQU96_13660 PF07690 Major Facilitator Superfamily DQU96_13680 PF00324 Amino acid permease DQU96_13685 PF00999 Sodium/hydrogen exchanger family DQU96_13695 PF13520 Amino acid permease DQU96_13705 PF00144 Beta-lactamase DQU96_13720 PF08546 Ketopantoate reductase PanE/ApbA C terminal DQU96_13720 PF02558 Ketopantoate reductase PanE/ApbA DQU96_13725 PF07690 Major Facilitator Superfamily DQU96_13730 PF00528 Binding-protein-dependent transport system inner membrane component DQU96_13735 PF04069 Substrate binding domain of ABC-type glycine betaine transport system DQU96_13740 PF00528 Binding-protein-dependent transport system inner membrane component DQU96_13745 PF00571 CBS domain DQU96_13745 PF00005 ABC transporter DQU96_13760 PF08818 Domain of unknown function (DU1801) DQU96_13770 PF13520 Amino acid permease DQU96_13775 PF00135 Carboxylesterase family DQU96_13780 PF07690 Major Facilitator Superfamily DQU96_13785 PF03649 Uncharacterised protein family (UPF0014) DQU96_13790 PF00005 ABC transporter DQU96_13795 PF05343 M42 glutamyl aminopeptidase DQU96_13800 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system DQU96_13815 PF06998 Protein of unknown function (DUF1307) DQU96_13820 PF01645 Conserved region in glutamate synthase DQU96_13830 PF07690 Major Facilitator Superfamily DQU96_13835 PF00005 ABC transporter DQU96_13840 PF00005 ABC transporter DQU96_13845 PF12911 N-terminal TM domain of oligopeptide transport permease C DQU96_13845 PF00528 Binding-protein-dependent transport system inner membrane component DQU96_13850 PF00528 Binding-protein-dependent transport system inner membrane component DQU96_13855 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DQU96_13860 PF10100 Staphylopine dehydrogenase DQU96_13875 PF12706 Beta-lactamase superfamily domain DQU96_13885 PF03806 AbgT putative transporter family DQU96_13890 PF02627 Carboxymuconolactone decarboxylase family DQU96_13915 PF00106 short chain dehydrogenase DQU96_13940 PF04507 Csa1 family DQU96_13965 PF04507 Csa1 family DQU96_13970 PF04507 Csa1 family DQU96_13975 PF04507 Csa1 family DQU96_13985 PF00293 NUDIX domain DQU96_13990 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DQU96_13990 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DQU96_13990 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DQU96_13990 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DQU96_14025 PF13463 Winged helix DNA-binding domain DQU96_14035 PF13610 DDE domain DQU96_14040 PF00483 Nucleotidyl transferase DQU96_14045 PF17961 Bacterial Ig domain DQU96_14045 PF00746 LPXTG cell wall anchor motif DQU96_14045 PF02986 Fibronectin binding repeat DQU96_14045 PF04650 YSIRK type signal peptide DQU96_14045 PF10425 C-terminus of bacterial fibrinogen-binding adhesin DQU96_14050 PF04650 YSIRK type signal peptide DQU96_14050 PF10425 C-terminus of bacterial fibrinogen-binding adhesin DQU96_14050 PF17961 Bacterial Ig domain DQU96_14050 PF02986 Fibronectin binding repeat DQU96_14050 PF00746 LPXTG cell wall anchor motif DQU96_14065 PF02447 GntP family permease DQU96_14070 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DQU96_14070 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DQU96_14075 PF07729 FCD domain DQU96_14075 PF00392 Bacterial regulatory proteins, gntR family DQU96_14080 PF13411 MerR HTH family regulatory protein DQU96_14085 PF04607 Region found in RelA / SpoT proteins DQU96_14090 PF09954 Uncharacterized protein conserved in bacteria (DUF2188) DQU96_14100 PF07690 Major Facilitator Superfamily DQU96_14105 PF09335 SNARE associated Golgi protein DQU96_14125 PF00005 ABC transporter DQU96_14135 PF06874 Firmicute fructose-1,6-bisphosphatase DQU96_14145 PF01738 Dienelactone hydrolase family DQU96_14150 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DQU96_14155 PF01047 MarR family DQU96_14165 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DQU96_14170 PF00881 Nitroreductase family DQU96_14175 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DQU96_14175 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DQU96_14185 PF00005 ABC transporter DQU96_14195 PF04203 Sortase domain DQU96_14215 PF03313 Serine dehydratase alpha chain DQU96_14220 PF01842 ACT domain DQU96_14220 PF03315 Serine dehydratase beta chain DQU96_14235 PF00892 EamA-like transporter family DQU96_14240 PF00934 PE family DQU96_14240 PF07859 alpha/beta hydrolase fold DQU96_14255 PF00367 phosphotransferase system, EIIB DQU96_14255 PF02378 Phosphotransferase system, EIIC DQU96_14255 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 DQU96_14260 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DQU96_14260 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DQU96_14260 PF00205 Thiamine pyrophosphate enzyme, central domain DQU96_14265 PF04172 LrgB-like family DQU96_14270 PF03788 LrgA family DQU96_14275 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DQU96_14275 PF03466 LysR substrate binding domain DQU96_14285 PF05257 CHAP domain DQU96_14290 PF00368 Hydroxymethylglutaryl-coenzyme A reductase DQU96_14295 PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal DQU96_14295 PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal DQU96_14300 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain DQU96_14300 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain DQU96_14305 PF10431 C-terminal, D2-small domain, of ClpB protein DQU96_14305 PF17871 AAA lid domain DQU96_14305 PF07724 AAA domain (Cdc48 subfamily) DQU96_14305 PF00004 ATPase family associated with various cellular activities (AAA) DQU96_14315 PF07670 Nucleoside recognition DQU96_14315 PF02421 Ferrous iron transport protein B DQU96_14315 PF17910 FeoB cytosolic helical domain DQU96_14315 PF07664 Ferrous iron transport protein B C terminus DQU96_14325 PF03176 MMPL family DQU96_14340 PF00171 Aldehyde dehydrogenase family DQU96_14345 PF12464 Maltose acetyltransferase DQU96_14345 PF14602 Hexapeptide repeat of succinyl-transferase DQU96_14345 PF00132 Bacterial transferase hexapeptide (six repeats) DQU96_14360 PF00403 Heavy-metal-associated domain DQU96_14365 PF00403 Heavy-metal-associated domain DQU96_14370 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DQU96_14370 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DQU96_14375 PF00155 Aminotransferase class I and II DQU96_14380 PF01593 Flavin containing amine oxidoreductase DQU96_14390 PF00535 Glycosyl transferase family 2 DQU96_14395 PF01593 Flavin containing amine oxidoreductase DQU96_14410 PF01757 Acyltransferase family DQU96_14420 PF01464 Transglycosylase SLT domain DQU96_14445 PF05979 Bacterial protein of unknown function (DUF896) DQU96_14460 PF13610 DDE domain DQU96_14500 PF01636 Phosphotransferase enzyme family DQU96_14505 PF00583 Acetyltransferase (GNAT) family DQU96_14515 PF13610 DDE domain DQU96_14520 PF00392 Bacterial regulatory proteins, gntR family DQU96_14520 PF00155 Aminotransferase class I and II DQU96_14530 PF01810 LysE type translocator DQU96_14535 PF13610 DDE domain DQU96_14540 PF00005 ABC transporter DQU96_14545 PF01636 Phosphotransferase enzyme family DQU96_14550 PF00239 Resolvase, N terminal domain DQU96_14550 PF02796 Helix-turn-helix domain of resolvase DQU96_14555 PF01022 Bacterial regulatory protein, arsR family DQU96_14560 PF00403 Heavy-metal-associated domain DQU96_14580 PF13610 DDE domain DQU96_14615 PF02492 CobW/HypB/UreG, nucleotide-binding domain DQU96_14615 PF07683 Cobalamin synthesis protein cobW C-terminal domain DQU96_14620 PF00561 alpha/beta hydrolase fold DQU96_14630 PF00106 short chain dehydrogenase DQU96_14635 PF00440 Bacterial regulatory proteins, tetR family DQU96_14650 PF13610 DDE domain DQU96_14695 PF13610 DDE domain DQU96_14710 PF01180 Dihydroorotate dehydrogenase DQU96_14720 PF02677 Epoxyqueuosine reductase QueH DQU96_14745 PF00089 Trypsin DQU96_14750 PF02261 Aspartate decarboxylase DQU96_14755 PF02569 Pantoate-beta-alanine ligase DQU96_14760 PF02548 Ketopantoate hydroxymethyltransferase DQU96_14765 PF02558 Ketopantoate reductase PanE/ApbA DQU96_14765 PF08546 Ketopantoate reductase PanE/ApbA C terminal DQU96_14770 PF03306 Alpha-acetolactate decarboxylase DQU96_14775 PF00056 lactate/malate dehydrogenase, NAD binding domain DQU96_14775 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain DQU96_14785 PF13520 Amino acid permease DQU96_14790 PF00202 Aminotransferase class-III DQU96_14800 PF00274 Fructose-bisphosphate aldolase class-I DQU96_14805 PF06039 Malate:quinone oxidoreductase (Mqo) DQU96_14815 PF00501 AMP-binding enzyme DQU96_14815 PF13193 AMP-binding enzyme C-terminal domain DQU96_14830 PF05199 GMC oxidoreductase DQU96_14830 PF00732 GMC oxidoreductase DQU96_14850 PF02028 BCCT, betaine/carnitine/choline family transporter DQU96_14870 PF13597 Anaerobic ribonucleoside-triphosphate reductase DQU96_14870 PF03477 ATP cone domain DQU96_14875 PF03600 Citrate transporter DQU96_14885 PF14824 Sirohaem biosynthesis protein central DQU96_14890 PF00667 FAD binding domain DQU96_14890 PF00258 Flavodoxin DQU96_14890 PF00175 Oxidoreductase NAD-binding domain DQU96_14900 PF00255 Glutathione peroxidase DQU96_14925 PF00005 ABC transporter DQU96_14930 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DQU96_14935 PF00486 Transcriptional regulatory protein, C terminal DQU96_14935 PF00072 Response regulator receiver domain DQU96_14945 PF00245 Alkaline phosphatase DQU96_14955 PF01047 MarR family DQU96_14965 PF00746 LPXTG cell wall anchor motif DQU96_14965 PF17961 Bacterial Ig domain DQU96_14965 PF04650 YSIRK type signal peptide DQU96_14965 PF10425 C-terminus of bacterial fibrinogen-binding adhesin DQU96_14970 PF13545 Crp-like helix-turn-helix domain DQU96_14970 PF00027 Cyclic nucleotide-binding domain DQU96_14975 PF00696 Amino acid kinase family DQU96_14980 PF13520 Amino acid permease DQU96_14985 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain DQU96_14985 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain DQU96_15000 PF01316 Arginine repressor, DNA binding domain DQU96_15000 PF02863 Arginine repressor, C-terminal domain DQU96_15005 PF02868 Thermolysin metallopeptidase, alpha-helical domain DQU96_15005 PF01447 Thermolysin metallopeptidase, catalytic domain DQU96_15005 PF03413 Peptidase propeptide and YPEB domain DQU96_15005 PF07504 Fungalysin/Thermolysin Propeptide Motif DQU96_15020 PF08279 HTH domain DQU96_15020 PF00874 PRD domain DQU96_15020 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DQU96_15020 PF05043 Mga helix-turn-helix domain DQU96_15025 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DQU96_15025 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DQU96_15025 PF02378 Phosphotransferase system, EIIC DQU96_15030 PF01238 Phosphomannose isomerase type I DQU96_15035 PF01061 ABC-2 type transporter DQU96_15040 PF05257 CHAP domain DQU96_15040 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase DQU96_15045 PF00857 Isochorismatase family DQU96_15045 PF00550 Phosphopantetheine attachment site DQU96_15050 PF01468 GA module DQU96_15060 PF00534 Glycosyl transferases group 1 DQU96_15065 PF07516 SecA Wing and Scaffold domain DQU96_15065 PF01043 SecA preprotein cross-linking domain DQU96_15065 PF07517 SecA DEAD-like domain DQU96_15070 PF15432 Accessory Sec secretory system ASP3 DQU96_15075 PF16929 Accessory Sec system GspB-transporter DQU96_15080 PF16993 Accessory Sec system protein Asp1 DQU96_15085 PF00344 SecY translocase DQU96_15090 PF00746 LPXTG cell wall anchor motif DQU96_15095 PF01613 Flavin reductase like domain DQU96_15115 PF01613 Flavin reductase like domain DQU96_15120 PF01641 SelR domain DQU96_15120 PF01625 Peptide methionine sulfoxide reductase DQU96_15135 PF13614 AAA domain DQU96_15140 PF02706 Chain length determinant protein DQU96_15145 PF18665 Tetracyclin repressor-like, C-terminal domain DQU96_15145 PF00440 Bacterial regulatory proteins, tetR family DQU96_15150 PF00535 Glycosyl transferase family 2 DQU96_15160 PF01522 Polysaccharide deacetylase DQU96_15165 PF01757 Acyltransferase family DQU96_15175 PF04650 YSIRK type signal peptide DQU96_15185 PF01502 Phosphoribosyl-AMP cyclohydrolase DQU96_15185 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase DQU96_15190 PF00977 Histidine biosynthesis protein DQU96_15195 PF00977 Histidine biosynthesis protein DQU96_15200 PF00117 Glutamine amidotransferase class-I DQU96_15205 PF00475 Imidazoleglycerol-phosphate dehydratase DQU96_15210 PF00155 Aminotransferase class I and II DQU96_15215 PF00815 Histidinol dehydrogenase DQU96_15220 PF01634 ATP phosphoribosyltransferase DQU96_15225 PF13393 Histidyl-tRNA synthetase DQU96_15245 PF12558 ATP-binding cassette cobalt transporter DQU96_15245 PF00005 ABC transporter DQU96_15250 PF07155 ECF-type riboflavin transporter, S component DQU96_15260 PF04264 YceI-like domain DQU96_15265 PF08450 SMP-30/Gluconolactonase/LRE-like region DQU96_15275 PF01470 Pyroglutamyl peptidase DQU96_15295 PF00939 Sodium:sulfate symporter transmembrane region DQU96_15300 PF00892 EamA-like transporter family DQU96_15310 PF03824 High-affinity nickel-transport protein DQU96_15315 PF00797 N-acetyltransferase DQU96_15325 PF00005 ABC transporter DQU96_15330 PF02687 FtsX-like permease family DQU96_15340 PF00313 'Cold-shock' DNA-binding domain DQU96_15360 PF02195 ParB-like nuclease domain DQU96_15360 PF17762 HTH domain found in ParB protein DQU96_15365 PF02527 rRNA small subunit methyltransferase G DQU96_15370 PF13932 GidA associated domain DQU96_15370 PF01134 Glucose inhibited division protein A DQU96_15375 PF10396 GTP-binding protein TrmE N-terminus DQU96_15375 PF12631 MnmE helical domain DQU96_15375 PF01926 50S ribosome-binding GTPase DQU96_15380 PF00825 Ribonuclease P DQU96_15385 PF00468 Ribosomal protein L34