locus-tag	class	description
DQU96_00015	COG2501	S4 domain
DQU96_00035	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
DQU96_00065	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
DQU96_00075	COG3887	signaling protein consisting of a modified GGDEF domain and a DHH domain
DQU96_00085	COG0305	Participates in initiation and elongation during chromosome replication
DQU96_00120	COG4863	YycH protein
DQU96_00130	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
DQU96_00135	COG0737	Belongs to the 5'-nucleotidase family
DQU96_00165	COG3316	Transposase and inactivated derivatives
DQU96_00190	COG0640	Transcriptional regulator
DQU96_00245	COG2918	glutathione biosynthetic process
DQU96_00245	COG1181	Belongs to the D-alanine--D-alanine ligase family
DQU96_00250	COG0627	Serine hydrolase involved in the detoxification of formaldehyde
DQU96_00255	COG1733	regulation of RNA biosynthetic process
DQU96_00300	COG1028	Short-chain dehydrogenase reductase Sdr
DQU96_00320	COG3316	Transposase and inactivated derivatives
DQU96_00325	COG3425	synthase
DQU96_00335	COG0584	glycerophosphoryl diester phosphodiesterase
DQU96_00340	COG2030	dehydratase
DQU96_00350	COG2602	Beta-lactamase
DQU96_00350	COG4219	Peptidase M56
DQU96_00415	COG3732	PTS system glucitol sorbitol-specific
DQU96_00420	COG3730	PTS system glucitol sorbitol-specific
DQU96_00470	COG0730	response to heat
DQU96_00475	COG1937	Protein conserved in bacteria
DQU96_00480	COG2210	Belongs to the sulfur carrier protein TusA family
DQU96_00485	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
DQU96_00540	COG0823	Involved in the tonB-independent uptake of proteins
DQU96_00575	COG1473	amidohydrolase
DQU96_00585	COG1283	sodium-dependent phosphate transmembrane transporter activity
DQU96_00590	COG4716	Myosin-crossreactive antigen
DQU96_00595	COG0697	spore germination
DQU96_00610	COG1620	l-lactate permease
DQU96_00630	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
DQU96_00635	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
DQU96_00640	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
DQU96_00650	COG2423	ornithine cyclodeaminase activity
DQU96_00655	COG4264	IucA IucC family
DQU96_00660	COG2814	Major facilitator Superfamily
DQU96_00665	COG4264	IucA IucC family
DQU96_00670	COG4264	IucA IucC family
DQU96_00680	COG0019	diaminopimelate decarboxylase activity
DQU96_00685	COG1475	DNA binding
DQU96_00710	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
DQU96_00715	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
DQU96_00720	COG0438	transferase activity, transferring glycosyl groups
DQU96_00755	COG0813	purine-nucleoside phosphorylase activity
DQU96_00760	COG2814	Major facilitator Superfamily
DQU96_00780	COG3639	organic phosphonate transmembrane transporter activity
DQU96_00800	COG0737	Belongs to the 5'-nucleotidase family
DQU96_00815	COG1012	belongs to the aldehyde dehydrogenase family
DQU96_00815	COG1454	alcohol dehydrogenase
DQU96_00840	COG1086	Polysaccharide biosynthesis protein
DQU96_00850	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
DQU96_00880	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
DQU96_00890	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
DQU96_00895	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
DQU96_00905	COG2832	Protein of unknown function (DUF454)
DQU96_00940	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
DQU96_00945	COG1960	acyl-CoA dehydrogenase activity
DQU96_00950	COG5609	conserved protein (DUF2294)
DQU96_01000	COG1114	Component of the transport system for branched-chain amino acids
DQU96_01005	COG1335	isochorismatase
DQU96_01010	COG3961	Belongs to the TPP enzyme family
DQU96_01040	COG1737	Transcriptional regulator
DQU96_01065	COG1136	(ABC) transporter
DQU96_01070	COG0577	efflux transmembrane transporter activity
DQU96_01070	COG1136	(ABC) transporter
DQU96_01110	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
DQU96_01120	COG0405	Gamma-glutamyltransferase
DQU96_01140	COG3842	ATPase activity
DQU96_01150	COG1175	transmembrane transport
DQU96_01155	COG3833	ABC-type maltose transport systems, permease component
DQU96_01160	COG0673	inositol 2-dehydrogenase activity
DQU96_01165	COG0673	inositol 2-dehydrogenase activity
DQU96_01175	COG1755	Isoprenylcysteine carboxyl methyltransferase
DQU96_01230	COG0183	Belongs to the thiolase family
DQU96_01240	COG1960	acyl-CoA dehydrogenase activity
DQU96_01245	COG0318	PFAM AMP-dependent synthetase and ligase
DQU96_01260	COG0747	negative chemotaxis
DQU96_01265	COG3189	MarR family transcriptional regulator
DQU96_01300	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
DQU96_01300	COG1263	PTS System
DQU96_01300	COG2190	(PTS) system
DQU96_01305	COG1957	nucleoside hydrolase
DQU96_01325	COG3414	Phosphotransferase system galactitol-specific IIB component
DQU96_01330	COG3775	system Galactitol-specific IIC component
DQU96_01335	COG1063	alcohol dehydrogenase
DQU96_01345	COG1063	alcohol dehydrogenase
DQU96_01350	COG1211	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
DQU96_01355	COG1063	alcohol dehydrogenase
DQU96_01360	COG1887	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
DQU96_01365	COG1887	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
DQU96_01375	COG1063	alcohol dehydrogenase
DQU96_01380	COG1887	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
DQU96_01415	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
DQU96_01425	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
DQU96_01425	COG2190	(PTS) system
DQU96_01425	COG1263	PTS System
DQU96_01430	COG2723	6-phospho-beta-galactosidase activity
DQU96_01440	COG2226	methyltransferase
DQU96_01515	COG3942	CHAP domain
DQU96_01515	COG1388	LysM domain
DQU96_01630	COG1114	Component of the transport system for branched-chain amino acids
DQU96_01640	COG2503	HAD superfamily, subfamily IIIB (Acid phosphatase)
DQU96_01650	COG0577	efflux transmembrane transporter activity
DQU96_01680	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
DQU96_01685	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
DQU96_01720	COG0582	viral genome integration into host DNA
DQU96_01995	COG1388	LysM domain
DQU96_01995	COG5632	N-Acetylmuramoyl-L-alanine amidase
DQU96_02010	COG3087	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
DQU96_02010	COG1075	acetyltransferases and hydrolases with the alpha beta hydrolase fold
DQU96_02030	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
DQU96_02060	COG3037	sugar-specific permease SgaT UlaA
DQU96_02070	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
DQU96_02100	COG2271	Major facilitator Superfamily
DQU96_02105	COG0346	lactoylglutathione lyase activity
DQU96_02110	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
DQU96_02115	COG0431	NADPH-dependent FMN reductase
DQU96_02130	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
DQU96_02135	COG2822	iron ion transport
DQU96_02140	COG2837	iron assimilation
DQU96_02145	COG0672	)-iron permease
DQU96_02150	COG0805	protein transport
DQU96_02155	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
DQU96_02165	COG1476	TRANSCRIPTIONal
DQU96_02205	COG0646	methionine synthase
DQU96_02205	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
DQU96_02210	COG0626	cystathionine gamma-synthase activity
DQU96_02215	COG0626	cystathionine gamma-synthase activity
DQU96_02225	COG1475	DNA binding
DQU96_02230	COG0668	transmembrane transport
DQU96_02235	COG4481	Protein conserved in bacteria
DQU96_02240	COG0012	GTP binding
DQU96_02355	COG1823	symporter activity
DQU96_02390	COG2233	PERMEase
DQU96_02430	COG3759	membrane
DQU96_02590	COG0523	cobalamin synthesis protein
DQU96_02615	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
DQU96_02625	COG5609	conserved protein (DUF2294)
DQU96_02640	COG1647	Serine aminopeptidase, S33
DQU96_02645	COG0733	neurotransmitter:sodium symporter activity
DQU96_02650	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
DQU96_02655	COG0626	cystathionine gamma-synthase activity
DQU96_02665	COG2011	ABC-type metal ion transport system permease component
DQU96_02670	COG1464	Belongs to the NlpA lipoprotein family
DQU96_02705	COG0583	DNA-binding transcription factor activity
DQU96_02710	COG0069	glutamate synthase activity
DQU96_02710	COG0070	glutamate synthase
DQU96_02710	COG0067	glutamate synthase
DQU96_02715	COG0493	'glutamate synthase
DQU96_02725	COG1263	PTS System
DQU96_02725	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
DQU96_02730	COG0366	Alpha amylase catalytic
DQU96_02735	COG2188	Transcriptional regulator
DQU96_02755	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
DQU96_02760	COG0718	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
DQU96_02795	COG1982	Orn Lys Arg decarboxylase major
DQU96_02805	COG3870	Protein conserved in bacteria
DQU96_02810	COG0470	DNA polymerase III
DQU96_02815	COG1774	PSP1 C-terminal conserved region
DQU96_02825	COG4123	Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)
DQU96_02835	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
DQU96_02845	COG0084	hydrolase, TatD family'
DQU96_02850	COG1658	Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
DQU96_02860	COG4466	Protein conserved in bacteria
DQU96_02870	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
DQU96_02875	COG0251	oxidation-reduction process
DQU96_02920	COG2244	polysaccharide biosynthetic process
DQU96_02925	COG3956	TIGRFAM MazG family protein
DQU96_02930	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
DQU96_02940	COG1098	S1 RNA binding domain
DQU96_02955	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
DQU96_02980	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
DQU96_03075	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
DQU96_03090	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
DQU96_03100	COG3880	PFAM UvrB UvrC protein
DQU96_03115	COG1066	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
DQU96_03120	COG4956	integral membrane protein (PIN domain superfamily)
DQU96_03145	COG1939	Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
DQU96_03170	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
DQU96_03175	COG0250	Participates in transcription elongation, termination and antitermination
DQU96_03205	COG2813	Specifically methylates the guanine in position
DQU96_03215	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
DQU96_03245	COG1473	amidohydrolase
DQU96_03275	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
DQU96_03280	COG1428	Deoxynucleoside kinase
DQU96_03285	COG1428	Deoxynucleoside kinase
DQU96_03295	COG0561	phosphatase activity
DQU96_03330	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
DQU96_03345	COG0269	3-dehydro-L-gulonate-6-phosphate decarboxylase activity
DQU96_03445	COG0095	Lipoate-protein ligase
DQU96_03450	COG0083	homoserine kinase activity
DQU96_03470	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
DQU96_03505	COG0667	Aldo Keto reductase
DQU96_03515	COG0655	NAD(P)H dehydrogenase (quinone) activity
DQU96_03525	COG1078	dGTPase activity
DQU96_03560	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
DQU96_03615	COG4974	Belongs to the 'phage' integrase family
DQU96_03670	COG0803	Belongs to the bacterial solute-binding protein 9 family
DQU96_03675	COG1108	ABC-type Mn2 Zn2 transport systems permease components
DQU96_03680	COG1121	(ABC) transporter
DQU96_03685	COG1321	iron dependent repressor
DQU96_03695	COG1922	lipopolysaccharide N-acetylmannosaminouronosyltransferase activity
DQU96_03705	COG1682	transport, permease protein
DQU96_03710	COG1887	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
DQU96_03720	COG0615	ADP-L-glycero-beta-D-manno-heptose biosynthetic process
DQU96_03725	COG1686	Belongs to the peptidase S11 family
DQU96_03730	COG1132	(ABC) transporter
DQU96_03735	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
DQU96_03745	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
DQU96_03750	COG1120	ATPase activity
DQU96_03755	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
DQU96_03760	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
DQU96_03765	COG2376	Dihydroxyacetone kinase
DQU96_03775	COG3412	dihydroxyacetone kinase, phosphotransfer subunit
DQU96_03785	COG3949	Membrane
DQU96_03825	COG1136	(ABC) transporter
DQU96_03830	COG0577	efflux transmembrane transporter activity
DQU96_03835	COG1392	Phosphate transport regulator
DQU96_03840	COG0306	phosphate transporter
DQU96_03845	COG1388	LysM domain
DQU96_03845	COG3942	CHAP domain
DQU96_03855	COG4977	sequence-specific DNA binding
DQU96_03855	COG1917	Cupin 2, conserved barrel domain protein
DQU96_03885	COG0583	DNA-binding transcription factor activity
DQU96_03890	COG2814	Major facilitator Superfamily
DQU96_03895	COG2839	Protein conserved in bacteria
DQU96_03925	COG1611	Belongs to the LOG family
DQU96_03945	COG4988	ABC transporter
DQU96_03950	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
DQU96_03955	COG1846	Transcriptional regulator
DQU96_03960	COG0523	cobalamin synthesis protein
DQU96_03965	COG4989	oxidoreductase activity
DQU96_03975	COG0471	metal ion transport
DQU96_04010	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
DQU96_04015	COG1349	DNA-binding transcription factor activity
DQU96_04020	COG1105	Belongs to the carbohydrate kinase PfkB family
DQU96_04025	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
DQU96_04025	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
DQU96_04025	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
DQU96_04030	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
DQU96_04035	COG1253	flavin adenine dinucleotide binding
DQU96_04040	COG0656	L-ascorbic acid biosynthetic process
DQU96_04045	COG0463	Glycosyl transferase, family 2
DQU96_04080	COG0720	synthase
DQU96_04090	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
DQU96_04090	COG0512	Glutamine amidotransferase of anthranilate synthase
DQU96_04095	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
DQU96_04125	COG0488	(ABC) transporter
DQU96_04130	COG0514	ATP-dependent DNA helicase (RecQ)
DQU96_04135	COG1125	glycine betaine transport
DQU96_04135	COG0517	IMP dehydrogenase activity
DQU96_04140	COG1174	glycine betaine transport
DQU96_04170	COG3104	oligopeptide transport
DQU96_04200	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
DQU96_04205	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
DQU96_04215	COG4606	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
DQU96_04220	COG4605	iron ion homeostasis
DQU96_04225	COG4604	ABC transporter, ATP-binding protein
DQU96_04230	COG4607	ABC-type enterochelin transport system periplasmic component
DQU96_04285	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
DQU96_04290	COG1739	Uncharacterized protein family UPF0029
DQU96_04300	COG4098	Superfamily II DNA RNA helicase required for DNA uptake (late competence protein)
DQU96_04305	COG1040	competence protein
DQU96_04335	COG1388	LysM domain
DQU96_04335	COG3942	CHAP domain
DQU96_04395	COG0391	Required for morphogenesis under gluconeogenic growth conditions
DQU96_04465	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
DQU96_04470	COG1647	Serine aminopeptidase, S33
DQU96_04475	COG0557	exoribonuclease II activity
DQU96_04575	COG3728	DNA packaging
DQU96_04575	COG5484	DNA packaging
DQU96_04600	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
DQU96_04605	COG3315	Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity
DQU96_04670	COG1278	Cold shock
DQU96_04710	COG0406	alpha-ribazole phosphatase activity
DQU96_04715	COG1279	arginine transmembrane transporter activity
DQU96_04740	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
DQU96_04745	COG1393	Belongs to the ArsC family
DQU96_04760	COG3878	Protein conserved in bacteria
DQU96_04775	COG1658	Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
DQU96_04790	COG2011	ABC-type metal ion transport system permease component
DQU96_04795	COG1464	Belongs to the NlpA lipoprotein family
DQU96_04810	COG0396	ATPase activity
DQU96_04815	COG0719	Fe-S assembly protein
DQU96_04825	COG0822	iron-sulfur transferase activity
DQU96_04850	COG1253	flavin adenine dinucleotide binding
DQU96_04865	COG1801	Protein of unknown function DUF72
DQU96_04870	COG0730	response to heat
DQU96_04885	COG4470	Protein conserved in bacteria
DQU96_04905	COG2445	Protein of unknown function DUF86
DQU96_04935	COG1696	Membrane protein involved in D-alanine export
DQU96_04945	COG3966	Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
DQU96_04950	COG0694	Involved in iron-sulfur cluster biogenesis. Binds a 4Fe- 4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe S proteins. Could also act as a scaffold chaperone for damaged Fe S proteins
DQU96_04955	COG4837	Protein of unknown function (DUF1462)
DQU96_04960	COG1252	NADH dehydrogenase
DQU96_04970	COG0316	Belongs to the HesB IscA family
DQU96_04980	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
DQU96_04985	COG2056	Na+-H+ antiporter family
DQU96_04990	COG2050	protein possibly involved in aromatic compounds catabolism
DQU96_05045	COG1098	S1 RNA binding domain
DQU96_05050	COG1902	pentaerythritol trinitrate reductase activity
DQU96_05065	COG0584	glycerophosphoryl diester phosphodiesterase
DQU96_05085	COG0398	Pfam SNARE associated Golgi protein
DQU96_05125	COG0561	phosphatase activity
DQU96_05165	COG1881	PFAM PEBP family protein
DQU96_05195	COG0601	transmembrane transport
DQU96_05205	COG0444	Belongs to the ABC transporter superfamily
DQU96_05210	COG4608	Belongs to the ABC transporter superfamily
DQU96_05215	COG4166	transmembrane transport
DQU96_05220	COG0747	negative chemotaxis
DQU96_05225	COG0444	Belongs to the ABC transporter superfamily
DQU96_05230	COG4608	Belongs to the ABC transporter superfamily
DQU96_05235	COG0601	transmembrane transport
DQU96_05240	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
DQU96_05265	COG1164	Oligoendopeptidase f
DQU96_05275	COG2346	COG2346, Truncated hemoglobins
DQU96_05290	COG2357	RelA SpoT domain protein
DQU96_05300	COG0564	pseudouridine synthase activity
DQU96_05305	COG2239	Acts as a magnesium transporter
DQU96_05310	COG0475	glutathione-regulated potassium exporter activity
DQU96_05310	COG0569	domain protein
DQU96_05330	COG0628	permease
DQU96_05335	COG1115	amino acid carrier protein
DQU96_05375	COG0861	Integral membrane protein TerC family
DQU96_05390	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
DQU96_05395	COG0737	Belongs to the 5'-nucleotidase family
DQU96_05410	COG4903	ComK protein
DQU96_05425	COG4873	Protein conserved in bacteria
DQU96_05480	COG4594	ABC-type Fe3 -citrate transport system, periplasmic component
DQU96_05490	COG2314	TM2 domain
DQU96_05495	COG0456	acetyltransferase
DQU96_05500	COG1575	Belongs to the MenA family. Type 1 subfamily
DQU96_05510	COG1169	isochorismate synthase
DQU96_05520	COG2267	carboxylic ester hydrolase activity
DQU96_05545	COG0436	Aminotransferase
DQU96_05550	COG3594	Acyltransferase
DQU96_05570	COG2153	protein acetylation
DQU96_05580	COG1316	TRANSCRIPTIONal
DQU96_05625	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
DQU96_05640	COG1828	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
DQU96_05680	COG0619	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
DQU96_05685	COG4172	Belongs to the ABC transporter superfamily
DQU96_05690	COG4721	ABC-type cobalt transport system, permease component
DQU96_05715	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
DQU96_05740	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
DQU96_05745	COG1271	oxidase subunit
DQU96_05750	COG1294	oxidase, subunit
DQU96_05755	COG0569	domain protein
DQU96_05820	COG1176	ABC-type spermidine putrescine transport system, permease component I
DQU96_05825	COG1177	transmembrane transport
DQU96_05830	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
DQU96_05855	COG0483	inositol monophosphate 1-phosphatase activity
DQU96_05875	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
DQU96_05885	COG0772	Belongs to the SEDS family
DQU96_05890	COG1038	Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second
DQU96_05920	COG3679	Belongs to the UPF0342 family
DQU96_05940	COG0742	ribosomal rna small subunit methyltransferase
DQU96_06125	COG1783	phage Terminase large subunit
DQU96_06255	COG1388	LysM domain
DQU96_06255	COG5632	N-Acetylmuramoyl-L-alanine amidase
DQU96_06300	COG4509	Sortase family
DQU96_06315	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
DQU96_06360	COG1796	DNA polymerase
DQU96_06360	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
DQU96_06385	COG2009	succinate dehydrogenase
DQU96_06390	COG1053	succinate dehydrogenase
DQU96_06395	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
DQU96_06525	COG1288	antiporter activity
DQU96_06560	COG1011	Hydrolase
DQU96_06585	COG4839	cell division protein FtsL
DQU96_06605	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
DQU96_06610	COG0849	cell division
DQU96_06615	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
DQU96_06625	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
DQU96_06635	COG0762	integral membrane protein
DQU96_06640	COG2302	S4 RNA-binding domain
DQU96_06645	COG3599	regulation of cell shape
DQU96_06655	COG2514	catechol 2,3-dioxygenase activity
DQU96_06675	COG0564	pseudouridine synthase activity
DQU96_06685	COG2233	PERMEase
DQU96_06745	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
DQU96_06750	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
DQU96_06760	COG2314	TM2 domain
DQU96_06775	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
DQU96_06775	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
DQU96_06785	COG0631	protein serine/threonine phosphatase activity
DQU96_06800	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
DQU96_06815	COG1302	Protein conserved in bacteria
DQU96_06865	COG1196	nuclear chromosome segregation
DQU96_06870	COG0552	protein localization to endoplasmic reticulum
DQU96_06880	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
DQU96_06935	COG2348	transferase activity, transferring amino-acyl groups
DQU96_06940	COG0758	DNA mediated transformation
DQU96_07040	COG0195	Participates in both transcription termination and antitermination
DQU96_07045	COG2740	Nucleic-acid-binding protein implicated in transcription termination
DQU96_07070	COG0196	riboflavin kinase activity
DQU96_07100	COG2188	Transcriptional regulator
DQU96_07105	COG0612	Peptidase, M16
DQU96_07110	COG0612	Peptidase, M16
DQU96_07115	COG0300	oxidoreductase activity
DQU96_07135	COG1058	Belongs to the CinA family
DQU96_07135	COG1546	Belongs to the CinA family
DQU96_07155	COG1692	metallophosphoesterase
DQU96_07160	COG1014	Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
DQU96_07160	COG0674	pyruvate-flavodoxin oxidoreductase activity
DQU96_07165	COG1013	pyruvate-flavodoxin oxidoreductase activity
DQU96_07200	COG1954	Regulates expression of the glpD operon. In the presence of glycerol 3-phosphate (G3P) causes antitermination of transcription of glpD at the inverted repeat of the leader region to enhance its transcription. Binds and stabilizes glpD leader mRNA
DQU96_07205	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
DQU96_07230	COG1923	regulation of RNA biosynthetic process
DQU96_07245	COG4100	CystaTHIonine beta-lyase family protein involved in aluminum resistance
DQU96_07250	COG0789	Transcriptional regulator
DQU96_07335	COG1131	(ABC) transporter
DQU96_07350	COG2197	response regulator
DQU96_07360	COG1525	nuclease
DQU96_07375	COG0527	aspartate kinase activity
DQU96_07380	COG0460	homoserine dehydrogenase
DQU96_07385	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
DQU96_07410	COG0833	amino acid
DQU96_07440	COG2340	Cysteine-rich secretory protein family
DQU96_07475	COG4846	Membrane protein involved in cytochrome C biogenesis
DQU96_07495	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
DQU96_07510	COG0824	Thioesterase
DQU96_07550	COG1115	amino acid carrier protein
DQU96_07565	COG0628	permease
DQU96_07575	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
DQU96_07580	COG1316	TRANSCRIPTIONal
DQU96_07590	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
DQU96_07600	COG1363	Peptidase, m42
DQU96_07605	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
DQU96_07610	COG0512	Glutamine amidotransferase of anthranilate synthase
DQU96_07645	COG2348	transferase activity, transferring amino-acyl groups
DQU96_07655	COG0561	phosphatase activity
DQU96_07700	COG0704	Plays a role in the regulation of phosphate uptake
DQU96_07710	COG0581	inorganic phosphate transmembrane transporter activity
DQU96_07715	COG0573	inorganic phosphate transmembrane transporter activity
DQU96_07735	COG0488	(ABC) transporter
DQU96_07745	COG0527	aspartate kinase activity
DQU96_07750	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
DQU96_07825	COG4548	von Willebrand factor, type A
DQU96_07875	COG0671	phosphoesterase, PA-phosphatase related
DQU96_07950	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
DQU96_07970	COG0531	amino acid
DQU96_07985	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
DQU96_07990	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
DQU96_08005	COG0116	Belongs to the methyltransferase superfamily
DQU96_08045	COG4499	WXG100 protein secretion system (Wss), protein YukC
DQU96_08045	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
DQU96_08055	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
DQU96_08060	COG3935	DnaD domain protein
DQU96_08085	COG0438	transferase activity, transferring glycosyl groups
DQU96_08090	COG1694	Mazg nucleotide pyrophosphohydrolase
DQU96_08095	COG2738	Putative neutral zinc metallopeptidase
DQU96_08100	COG4347	Protein of unknown function (DUF1405)
DQU96_08140	COG0142	geranyltranstransferase activity
DQU96_08205	COG0492	ferredoxin-NADP+ reductase activity
DQU96_08220	COG0514	ATP-dependent DNA helicase (RecQ)
DQU96_08230	COG1141	Ferredoxin
DQU96_08275	COG0745	RESPONSE REGULATOR receiver
DQU96_08280	COG1187	pseudouridine synthase activity
DQU96_08305	COG0735	belongs to the Fur family
DQU96_08310	COG0494	nUDIX hydrolase
DQU96_08315	COG0667	Aldo Keto reductase
DQU96_08325	COG4221	oxidoreductase activity
DQU96_08340	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
DQU96_08350	COG0366	Alpha amylase catalytic
DQU96_08355	COG1609	Transcriptional regulator
DQU96_08380	COG2195	Cleaves the N-terminal amino acid of tripeptides
DQU96_08390	COG4129	membrane
DQU96_08400	COG0508	dehydrogenase complex catalyzes the overall conversion of
DQU96_08405	COG0022	dehydrogenase e1 component
DQU96_08410	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
DQU96_08415	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
DQU96_08420	COG0497	DNA recombination
DQU96_08450	COG1302	Protein conserved in bacteria
DQU96_08455	COG0439	Biotin carboxylase
DQU96_08460	COG0511	ligase activity, forming carbon-carbon bonds
DQU96_08470	COG0006	proline dipeptidase activity
DQU96_08485	COG0095	Lipoate-protein ligase
DQU96_08490	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
DQU96_08535	COG4537	Required for transformation and DNA binding
DQU96_08540	COG1459	type II secretion system
DQU96_08545	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
DQU96_08550	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
DQU96_08555	COG0011	TIGRFAM Protein of
DQU96_08560	COG1940	carbohydrate kinase activity
DQU96_08575	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
DQU96_08595	COG0735	belongs to the Fur family
DQU96_08600	COG1108	ABC-type Mn2 Zn2 transport systems permease components
DQU96_08605	COG1121	(ABC) transporter
DQU96_08615	COG0513	Belongs to the DEAD box helicase family
DQU96_08625	COG2384	SAM-dependent methyltransferase
DQU96_08630	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
DQU96_08645	COG0517	IMP dehydrogenase activity
DQU96_08665	COG0295	cytidine deaminase activity
DQU96_08680	COG1702	phosphate starvation-inducible protein PhoH
DQU96_08695	COG1030	water channel activity
DQU96_08705	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
DQU96_08710	COG1385	rRNA (uridine-N3-)-methyltransferase activity
DQU96_08740	COG0635	Involved in the biosynthesis of porphyrin-containing compound
DQU96_08755	COG1466	dna polymerase III delta subunit
DQU96_08760	COG0658	competence protein
DQU96_08760	COG2333	competence protein COMEC
DQU96_08765	COG2131	deaminase
DQU96_08770	COG2183	response to ionizing radiation
DQU96_08775	COG2226	methyltransferase
DQU96_08780	COG0799	negative regulation of ribosome biogenesis
DQU96_08785	COG1713	HD superfamily hydrolase involved in NAD metabolism
DQU96_08795	COG1534	Rna-binding protein
DQU96_08805	COG1161	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
DQU96_08810	COG2179	HAD superfamily (subfamily IIIA) phosphatase, TIGR01668
DQU96_08840	COG3177	Filamentation induced by cAMP protein fic
DQU96_08845	COG1914	H( )-stimulated, divalent metal cation uptake system
DQU96_08855	COG0439	Biotin carboxylase
DQU96_08860	COG0511	ligase activity, forming carbon-carbon bonds
DQU96_08865	COG1984	allophanate hydrolase subunit 2
DQU96_08870	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
DQU96_08920	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
DQU96_08940	COG1104	cysteine desulfurase activity
DQU96_08945	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
DQU96_08960	COG1959	2 iron, 2 sulfur cluster binding
DQU96_08965	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
DQU96_08970	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
DQU96_09015	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
DQU96_09015	COG4199	Single-strand DNA-specific exonuclease, C terminal domain
DQU96_09020	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
DQU96_09020	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
DQU96_09025	COG1862	Preprotein translocase
DQU96_09065	COG2868	ribosomal protein
DQU96_09110	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
DQU96_09155	COG1989	Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue
DQU96_09165	COG0285	dihydrofolate synthase activity
DQU96_09175	COG2818	Glycosylase
DQU96_09195	COG0113	porphobilinogen synthase activity
DQU96_09210	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
DQU96_09245	COG4112	unkown
DQU96_09270	COG0833	amino acid
DQU96_09285	COG1484	DNA-dependent DNA replication
DQU96_09310	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
DQU96_09315	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
DQU96_09315	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
DQU96_09325	COG5002	protein histidine kinase activity
DQU96_09330	COG0745	RESPONSE REGULATOR receiver
DQU96_09345	COG0372	Belongs to the citrate synthase family
DQU96_09350	COG1113	amino acid transport
DQU96_09375	COG0281	malic enzyme
DQU96_09385	COG0618	3'(2'),5'-bisphosphate nucleotidase activity
DQU96_09390	COG4109	DRTGG domain
DQU96_09430	COG0827	DNA restriction-modification system
DQU96_09440	COG0730	response to heat
DQU96_09450	COG1104	cysteine desulfurase activity
DQU96_09465	COG1956	GAF domain-containing protein
DQU96_09485	COG0584	glycerophosphoryl diester phosphodiesterase
DQU96_09490	COG1764	response to oxidative stress
DQU96_09495	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
DQU96_09500	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
DQU96_09515	COG1263	PTS System
DQU96_09515	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
DQU96_09520	COG0204	Acyl-transferase
DQU96_09525	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
DQU96_09560	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
DQU96_09565	COG0454	-acetyltransferase
DQU96_09585	COG2876	3-deoxy-7-phosphoheptulonate synthase activity
DQU96_09585	COG1605	Chorismate mutase
DQU96_09610	COG1674	ftsk spoiiie
DQU96_09615	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
DQU96_09625	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
DQU96_09630	COG1363	Peptidase, m42
DQU96_09640	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
DQU96_09650	COG0510	thiamine kinase activity
DQU96_09670	COG1187	pseudouridine synthase activity
DQU96_09675	COG2244	polysaccharide biosynthetic process
DQU96_09680	COG2081	HI0933 family
DQU96_09700	COG2814	Major facilitator Superfamily
DQU96_09705	COG1242	4 iron, 4 sulfur cluster binding
DQU96_09710	COG2519	Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA
DQU96_09715	COG1846	Transcriptional regulator
DQU96_09720	COG2267	carboxylic ester hydrolase activity
DQU96_09750	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
DQU96_09750	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
DQU96_09770	COG5632	N-Acetylmuramoyl-L-alanine amidase
DQU96_09770	COG4193	domain, Protein
DQU96_09770	COG3266	domain, Protein
DQU96_09800	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
DQU96_09810	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
DQU96_09825	COG0656	L-ascorbic acid biosynthetic process
DQU96_09845	COG1506	peptidase
DQU96_09850	COG2816	NAD+ diphosphatase activity
DQU96_10145	COG1131	(ABC) transporter
DQU96_10150	COG0537	adenosine 5'-monophosphoramidase activity
DQU96_10180	COG0420	3'-5' exonuclease activity
DQU96_10210	COG2197	response regulator
DQU96_10215	COG4585	Histidine kinase
DQU96_10215	COG2203	Gaf domain
DQU96_10220	COG0564	pseudouridine synthase activity
DQU96_10250	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
DQU96_10255	COG1126	abc transporter atp-binding protein
DQU96_10260	COG0765	amino acid transport
DQU96_10430	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
DQU96_10435	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
DQU96_10445	COG4129	membrane
DQU96_10470	COG1988	membrane-bound metal-dependent
DQU96_10485	COG1388	LysM domain
DQU96_10485	COG1134	teichoic acid transport
DQU96_10515	COG0535	radical SAM domain protein
DQU96_10520	COG1607	acyl-coa hydrolase
DQU96_10525	COG2309	aminopeptidase activity
DQU96_10545	COG1295	ribonuclease BN
DQU96_10665	COG4851	CamS sex pheromone cAM373 precursor
DQU96_10685	COG4496	protein, YerC YecD
DQU96_10725	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
DQU96_10735	COG0077	Prephenate dehydratase
DQU96_10755	COG1335	isochorismatase
DQU96_10770	COG1012	belongs to the aldehyde dehydrogenase family
DQU96_10825	COG1131	(ABC) transporter
DQU96_10840	COG1725	Transcriptional regulator
DQU96_10870	COG3568	Endonuclease Exonuclease Phosphatase
DQU96_10920	COG5632	N-Acetylmuramoyl-L-alanine amidase
DQU96_10920	COG1388	LysM domain
DQU96_10970	COG0739	heme binding
DQU96_11020	COG0740	serine-type endopeptidase activity
DQU96_11190	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
DQU96_11245	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
DQU96_11295	COG5484	DNA packaging
DQU96_11295	COG3728	DNA packaging
DQU96_11380	COG0582	viral genome integration into host DNA
DQU96_11445	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
DQU96_11450	COG1621	beta-fructofuranosidase activity
DQU96_11455	COG1609	Transcriptional regulator
DQU96_11460	COG0004	ammonium transporteR
DQU96_11465	COG0425	Belongs to the sulfur carrier protein TusA family
DQU96_11470	COG2391	methyltransferase activity
DQU96_11480	COG0488	(ABC) transporter
DQU96_11490	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
DQU96_11500	COG0456	acetyltransferase
DQU96_11505	COG1214	PFAM Peptidase M22, glycoprotease
DQU96_11510	COG0802	atpase or kinase
DQU96_11525	COG0028	Belongs to the TPP enzyme family
DQU96_11600	COG2183	response to ionizing radiation
DQU96_11605	COG1191	sigma factor activity
DQU96_11615	COG1366	Belongs to the anti-sigma-factor antagonist family
DQU96_11620	COG2208	phosphoserine phosphatase activity
DQU96_11655	COG3428	Bacterial PH domain
DQU96_11685	COG2205	protein histidine kinase activity
DQU96_11690	COG0745	RESPONSE REGULATOR receiver
DQU96_11710	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
DQU96_11720	COG0772	Belongs to the SEDS family
DQU96_11735	COG1937	Protein conserved in bacteria
DQU96_11745	COG1418	mRNA catabolic process
DQU96_11795	COG0629	single-stranded DNA binding
DQU96_11870	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
DQU96_11895	COG0009	L-threonylcarbamoyladenylate synthase
DQU96_11900	COG2890	protein-(glutamine-N5) methyltransferase activity
DQU96_11925	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
DQU96_11965	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
DQU96_12015	COG0813	purine-nucleoside phosphorylase activity
DQU96_12020	COG0783	Belongs to the Dps family
DQU96_12040	COG1482	cell wall glycoprotein biosynthetic process
DQU96_12045	COG0702	epimerase
DQU96_12050	COG0640	Transcriptional regulator
DQU96_12085	COG0561	phosphatase activity
DQU96_12090	COG1119	ATPase activity
DQU96_12105	COG3711	transcriptional antiterminator
DQU96_12135	COG1624	Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
DQU96_12205	COG0489	protein tyrosine kinase activity
DQU96_12210	COG2814	Major facilitator Superfamily
DQU96_12225	COG1272	protein, Hemolysin III
DQU96_12235	COG1988	membrane-bound metal-dependent
DQU96_12250	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
DQU96_12255	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
DQU96_12260	COG4594	ABC-type Fe3 -citrate transport system, periplasmic component
DQU96_12270	COG3457	Alanine racemase
DQU96_12275	COG4264	IucA IucC family
DQU96_12280	COG2814	Major facilitator Superfamily
DQU96_12305	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
DQU96_12315	COG2130	NADP-dependent
DQU96_12380	COG0656	L-ascorbic acid biosynthetic process
DQU96_12385	COG0789	Transcriptional regulator
DQU96_12395	COG5492	domain, Protein
DQU96_12415	COG3527	Alpha-acetolactate decarboxylase
DQU96_12420	COG0028	Belongs to the TPP enzyme family
DQU96_12535	COG0201	protein transport
DQU96_12650	COG2252	PERMEase
DQU96_12700	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
DQU96_12770	COG1763	Mo-molybdopterin cofactor biosynthetic process
DQU96_12790	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
DQU96_12795	COG4148	Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system
DQU96_12800	COG4149	molybdate abc transporter
DQU96_12805	COG0725	ABC transporter, periplasmic molybdate-binding protein
DQU96_12820	COG1268	BioY protein
DQU96_12835	COG1960	acyl-CoA dehydrogenase activity
DQU96_12840	COG4413	Urea transporter
DQU96_12905	COG3942	CHAP domain
DQU96_12915	COG1757	Na H antiporter
DQU96_13000	COG1113	amino acid transport
DQU96_13020	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
DQU96_13025	COG0385	Bile acid
DQU96_13035	COG1263	PTS System
DQU96_13035	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
DQU96_13040	COG1737	Transcriptional regulator
DQU96_13060	COG1028	Short-chain dehydrogenase reductase Sdr
DQU96_13065	COG1473	amidohydrolase
DQU96_13080	COG0583	DNA-binding transcription factor activity
DQU96_13105	COG2258	MOSC domain
DQU96_13125	COG1668	transmembrane transport
DQU96_13135	COG3152	Membrane
DQU96_13155	COG0786	glutamate:sodium symporter activity
DQU96_13165	COG0598	Magnesium transport protein CorA
DQU96_13180	COG0657	acetylesterase activity
DQU96_13190	COG2814	Major facilitator Superfamily
DQU96_13195	COG1566	PFAM secretion protein HlyD family protein
DQU96_13205	COG2814	Major facilitator Superfamily
DQU96_13270	COG1620	l-lactate permease
DQU96_13290	COG0604	alcohol dehydrogenase
DQU96_13320	COG1511	domain protein
DQU96_13335	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
DQU96_13335	COG1263	PTS System
DQU96_13350	COG3871	stress protein (general stress protein 26)
DQU96_13390	COG0789	Transcriptional regulator
DQU96_13410	COG2181	nitrate reductase activity
DQU96_13420	COG1140	nitrate reductase beta subunit
DQU96_13425	COG5013	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
DQU96_13435	COG2146	nitrite reductase [NAD(P)H] activity
DQU96_13440	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
DQU96_13450	COG0454	-acetyltransferase
DQU96_13455	COG2116	formate transmembrane transporter activity
DQU96_13470	COG3443	Belongs to the bacterial solute-binding protein 9 family
DQU96_13470	COG0803	Belongs to the bacterial solute-binding protein 9 family
DQU96_13510	COG1126	abc transporter atp-binding protein
DQU96_13515	COG0765	amino acid transport
DQU96_13520	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
DQU96_13525	COG2814	Major facilitator Superfamily
DQU96_13545	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
DQU96_13595	COG0156	8-amino-7-oxononanoate synthase activity
DQU96_13605	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
DQU96_13610	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
DQU96_13625	COG1132	(ABC) transporter
DQU96_13650	COG1929	Belongs to the glycerate kinase type-1 family
DQU96_13660	COG2814	Major facilitator Superfamily
DQU96_13680	COG1113	amino acid transport
DQU96_13695	COG0531	amino acid
DQU96_13720	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
DQU96_13730	COG1174	glycine betaine transport
DQU96_13740	COG1174	glycine betaine transport
DQU96_13760	COG4430	Bacteriocin-protection, YdeI or OmpD-Associated
DQU96_13770	COG0531	amino acid
DQU96_13775	COG2272	Belongs to the type-B carboxylesterase lipase family
DQU96_13780	COG2814	Major facilitator Superfamily
DQU96_13785	COG0390	transport system, permease component
DQU96_13790	COG4619	ABC transporter
DQU96_13795	COG1363	Peptidase, m42
DQU96_13815	COG4808	Protein conserved in bacteria
DQU96_13820	COG0069	glutamate synthase activity
DQU96_13875	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
DQU96_13880	COG1028	Short-chain dehydrogenase reductase Sdr
DQU96_13885	COG2978	secondary active p-aminobenzoyl-glutamate transmembrane transporter activity
DQU96_13890	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
DQU96_13985	COG0494	nUDIX hydrolase
DQU96_14030	COG1846	Transcriptional regulator
DQU96_14035	COG3316	Transposase and inactivated derivatives
DQU96_14070	COG1070	Carbohydrate kinase
DQU96_14075	COG1802	Transcriptional regulator
DQU96_14080	COG0789	Transcriptional regulator
DQU96_14085	COG2357	RelA SpoT domain protein
DQU96_14090	COG4876	unkown
DQU96_14100	COG2271	Major facilitator Superfamily
DQU96_14105	COG0586	Pfam SNARE associated Golgi protein
DQU96_14125	COG1131	(ABC) transporter
DQU96_14145	COG0400	carboxylic ester hydrolase activity
DQU96_14150	COG0346	lactoylglutathione lyase activity
DQU96_14155	COG1846	Transcriptional regulator
DQU96_14165	COG2514	catechol 2,3-dioxygenase activity
DQU96_14180	COG0561	phosphatase activity
DQU96_14185	COG1131	(ABC) transporter
DQU96_14195	COG3764	Sortase (surface protein transpeptidase)
DQU96_14215	COG1760	l-serine dehydratase
DQU96_14220	COG1760	l-serine dehydratase
DQU96_14235	COG0697	spore germination
DQU96_14240	COG0657	acetylesterase activity
DQU96_14260	COG0028	Belongs to the TPP enzyme family
DQU96_14265	COG1346	cytolysis
DQU96_14275	COG0583	DNA-binding transcription factor activity
DQU96_14285	COG3942	CHAP domain
DQU96_14295	COG3425	synthase
DQU96_14300	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
DQU96_14325	COG2409	Drug exporters of the RND superfamily
DQU96_14375	COG0436	Aminotransferase
DQU96_14410	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
DQU96_14410	COG2755	lipolytic protein G-D-S-L family
DQU96_14460	COG3316	Transposase and inactivated derivatives
DQU96_14505	COG0456	acetyltransferase
DQU96_14515	COG3316	Transposase and inactivated derivatives
DQU96_14520	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
DQU96_14530	COG1279	arginine transmembrane transporter activity
DQU96_14535	COG3316	Transposase and inactivated derivatives
DQU96_14545	COG3173	Aminoglycoside phosphotransferase
DQU96_14580	COG3316	Transposase and inactivated derivatives
DQU96_14650	COG3316	Transposase and inactivated derivatives
DQU96_14695	COG3316	Transposase and inactivated derivatives
DQU96_14710	COG0167	dihydroorotate dehydrogenase activity
DQU96_14765	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
DQU96_14770	COG3527	Alpha-acetolactate decarboxylase
DQU96_14785	COG0531	amino acid
DQU96_14815	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
DQU96_14845	COG1510	regulation of RNA biosynthetic process
DQU96_14850	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
DQU96_14875	COG2851	Citrate transporter
DQU96_14890	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
DQU96_14900	COG0386	Belongs to the glutathione peroxidase family
DQU96_14925	COG1136	(ABC) transporter
DQU96_14930	COG2205	protein histidine kinase activity
DQU96_14935	COG0745	RESPONSE REGULATOR receiver
DQU96_14945	COG1785	Belongs to the alkaline phosphatase family
DQU96_14955	COG1846	Transcriptional regulator
DQU96_14965	COG2931	calcium- and calmodulin-responsive adenylate cyclase activity
DQU96_14965	COG4932	domain protein
DQU96_15020	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
DQU96_15020	COG3711	transcriptional antiterminator
DQU96_15025	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
DQU96_15025	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
DQU96_15025	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
DQU96_15030	COG1482	cell wall glycoprotein biosynthetic process
DQU96_15040	COG1705	Flagellar rod assembly protein muramidase FlgJ
DQU96_15040	COG3942	CHAP domain
DQU96_15045	COG1535	isochorismatase
DQU96_15045	COG3433	isochorismatase activity
DQU96_15060	COG0438	transferase activity, transferring glycosyl groups
DQU96_15075	COG1073	alpha beta
DQU96_15095	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
DQU96_15115	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
DQU96_15145	COG1309	transcriptional regulator
DQU96_15150	COG1215	transferase activity, transferring glycosyl groups
DQU96_15165	COG3936	Protein involved in polysaccharide intercellular adhesin (PIA) synthesis biofilm formation
DQU96_15210	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
DQU96_15295	COG0471	metal ion transport
DQU96_15300	COG2962	Rard protein
DQU96_15310	COG3376	Belongs to the NiCoT transporter (TC 2.A.52) family
DQU96_15325	COG1136	(ABC) transporter
DQU96_15330	COG0577	efflux transmembrane transporter activity
DQU96_15340	COG1278	Cold shock
DQU96_15360	COG1475	DNA binding