locus-tag class description SAGV88_00001 PF08299 Bacterial dnaA protein helix-turn-helix SAGV88_00001 PF11638 DnaA N-terminal domain SAGV88_00001 PF00308 Bacterial dnaA protein SAGV88_00002 PF02768 DNA polymerase III beta subunit, C-terminal domain SAGV88_00002 PF02767 DNA polymerase III beta subunit, central domain SAGV88_00002 PF00712 DNA polymerase III beta subunit, N-terminal domain SAGV88_00004 PF02463 RecF/RecN/SMC N terminal domain SAGV88_00005 PF00204 DNA gyrase B SAGV88_00005 PF00986 DNA gyrase B subunit, carboxyl terminus SAGV88_00005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SAGV88_00005 PF01751 Toprim domain SAGV88_00006 PF03989 DNA gyrase C-terminal domain, beta-propeller SAGV88_00006 PF00521 DNA gyrase/topoisomerase IV, subunit A SAGV88_00007 PF01256 Carbohydrate kinase SAGV88_00008 PF00221 Aromatic amino acid lyase SAGV88_00009 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) SAGV88_00009 PF02403 Seryl-tRNA synthetase N-terminal domain SAGV88_00012 PF00561 alpha/beta hydrolase fold SAGV88_00014 PF02272 DHHA1 domain SAGV88_00014 PF01368 DHH family SAGV88_00015 PF01281 Ribosomal protein L9, N-terminal domain SAGV88_00015 PF03948 Ribosomal protein L9, C-terminal domain SAGV88_00016 PF00772 DnaB-like helicase N terminal domain SAGV88_00016 PF03796 DnaB-like helicase C terminal domain SAGV88_00017 PF00709 Adenylosuccinate synthetase SAGV88_00019 PF00072 Response regulator receiver domain SAGV88_00019 PF00486 Transcriptional regulatory protein, C terminal SAGV88_00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SAGV88_00020 PF00512 His Kinase A (phospho-acceptor) domain SAGV88_00020 PF13426 PAS domain SAGV88_00020 PF00672 HAMP domain SAGV88_00021 PF07435 YycH protein SAGV88_00023 PF00753 Metallo-beta-lactamase superfamily SAGV88_00024 PF02872 5'-nucleotidase, C-terminal domain SAGV88_00024 PF00149 Calcineurin-like phosphoesterase SAGV88_00026 PF02590 Predicted SPOUT methyltransferase SAGV88_00031 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain SAGV88_00031 PF01367 5'-3' exonuclease, C-terminal SAM fold SAGV88_00031 PF00476 DNA polymerase family A SAGV88_00035 PF00239 Resolvase, N terminal domain SAGV88_00035 PF02796 Helix-turn-helix domain of resolvase SAGV88_00040 PF04002 RadC-like JAB domain SAGV88_00058 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) SAGV88_00058 PF18766 SWI2/SNF2 ATPase SAGV88_00058 PF11867 Domain of unknown function (DUF3387) SAGV88_00059 PF13610 DDE domain SAGV88_00060 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain SAGV88_00064 PF00403 Heavy-metal-associated domain SAGV88_00064 PF07992 Pyridine nucleotide-disulphide oxidoreductase SAGV88_00064 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain SAGV88_00065 PF03243 Alkylmercury lyase SAGV88_00065 PF12324 Helix-turn-helix domain of alkylmercury lyase SAGV88_00067 PF13610 DDE domain SAGV88_00069 PF03009 Glycerophosphoryl diester phosphodiesterase family SAGV88_00070 PF01575 MaoC like domain SAGV88_00071 PF05223 NTF2-like N-terminal transpeptidase domain SAGV88_00071 PF03717 Penicillin-binding Protein dimerisation domain SAGV88_00071 PF00905 Penicillin binding protein transpeptidase domain SAGV88_00072 PF05569 BlaR1 peptidase M56 SAGV88_00072 PF00905 Penicillin binding protein transpeptidase domain SAGV88_00073 PF03965 Penicillinase repressor SAGV88_00075 PF00480 ROK family SAGV88_00077 PF16123 Hydroxyacylglutathione hydrolase C-terminus SAGV88_00077 PF00753 Metallo-beta-lactamase superfamily SAGV88_00078 PF13686 DsrE/DsrF/DrsH-like family SAGV88_00079 PF02583 Metal-sensitive transcriptional repressor SAGV88_00080 PF01925 Sulfite exporter TauE/SafE SAGV88_00082 PF00403 Heavy-metal-associated domain SAGV88_00083 PF01022 Bacterial regulatory protein, arsR family SAGV88_00085 PF00589 Phage integrase family SAGV88_00087 PF04002 RadC-like JAB domain SAGV88_00099 PF07728 AAA domain (dynein-related subfamily) SAGV88_00099 PF12102 Domain of unknown function (DUF3578) SAGV88_00107 PF07690 Major Facilitator Superfamily SAGV88_00111 PF00440 Bacterial regulatory proteins, tetR family SAGV88_00112 PF00583 Acetyltransferase (GNAT) family SAGV88_00113 PF01207 Dihydrouridine synthase (Dus) SAGV88_00118 PF00388 Phosphatidylinositol-specific phospholipase C, X domain SAGV88_00119 PF04507 Csa1 family SAGV88_00120 PF12833 Helix-turn-helix domain SAGV88_00121 PF01546 Peptidase family M20/M25/M40 SAGV88_00121 PF07687 Peptidase dimerisation domain SAGV88_00122 PF07690 Major Facilitator Superfamily SAGV88_00124 PF02690 Na+/Pi-cotransporter SAGV88_00126 PF06100 MCRA family SAGV88_00128 PF02652 L-lactate permease SAGV88_00129 PF03373 Octapeptide repeat SAGV88_00129 PF01476 LysM domain SAGV88_00129 PF00746 LPXTG cell wall anchor motif SAGV88_00129 PF02216 B domain SAGV88_00129 PF04650 YSIRK type signal peptide SAGV88_00131 PF01032 FecCD transport family SAGV88_00132 PF01032 FecCD transport family SAGV88_00133 PF01497 Periplasmic binding protein SAGV88_00134 PF00291 Pyridoxal-phosphate dependent enzyme SAGV88_00135 PF02423 Ornithine cyclodeaminase/mu-crystallin family SAGV88_00136 PF06276 Ferric iron reductase FhuF-like transporter SAGV88_00136 PF04183 IucA / IucC family SAGV88_00137 PF00083 Sugar (and other) transporter SAGV88_00137 PF07690 Major Facilitator Superfamily SAGV88_00138 PF04183 IucA / IucC family SAGV88_00138 PF06276 Ferric iron reductase FhuF-like transporter SAGV88_00139 PF04183 IucA / IucC family SAGV88_00139 PF06276 Ferric iron reductase FhuF-like transporter SAGV88_00140 PF03328 HpcH/HpaI aldolase/citrate lyase family SAGV88_00141 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain SAGV88_00141 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain SAGV88_00142 PF02195 ParB-like nuclease domain SAGV88_00148 PF00534 Glycosyl transferases group 1 SAGV88_00152 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain SAGV88_00152 PF02777 Iron/manganese superoxide dismutases, C-terminal domain SAGV88_00154 PF00392 Bacterial regulatory proteins, gntR family SAGV88_00154 PF07702 UTRA domain SAGV88_00155 PF01048 Phosphorylase superfamily SAGV88_00156 PF07690 Major Facilitator Superfamily SAGV88_00157 PF01791 DeoC/LacD family aldolase SAGV88_00158 PF01676 Metalloenzyme superfamily SAGV88_00159 PF00528 Binding-protein-dependent transport system inner membrane component SAGV88_00160 PF00528 Binding-protein-dependent transport system inner membrane component SAGV88_00161 PF00005 ABC transporter SAGV88_00164 PF02872 5'-nucleotidase, C-terminal domain SAGV88_00164 PF00149 Calcineurin-like phosphoesterase SAGV88_00167 PF00171 Aldehyde dehydrogenase family SAGV88_00167 PF00465 Iron-containing alcohol dehydrogenase SAGV88_00168 PF02706 Chain length determinant protein SAGV88_00172 PF02719 Polysaccharide biosynthesis protein SAGV88_00173 PF02719 Polysaccharide biosynthesis protein SAGV88_00173 PF08485 Polysaccharide biosynthesis protein C-terminal SAGV88_00174 PF01370 NAD dependent epimerase/dehydratase family SAGV88_00175 PF02350 UDP-N-acetylglucosamine 2-epimerase SAGV88_00178 PF00132 Bacterial transferase hexapeptide (six repeats) SAGV88_00178 PF14602 Hexapeptide repeat of succinyl-transferase SAGV88_00178 PF12464 Maltose acetyltransferase SAGV88_00181 PF02397 Bacterial sugar transferase SAGV88_00183 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain SAGV88_00183 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain SAGV88_00183 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain SAGV88_00184 PF02350 UDP-N-acetylglucosamine 2-epimerase SAGV88_00185 PF03992 Antibiotic biosynthesis monooxygenase SAGV88_00186 PF04304 Protein of unknown function (DUF454) SAGV88_00187 PF00171 Aldehyde dehydrogenase family SAGV88_00188 PF01545 Cation efflux family SAGV88_00188 PF16916 Dimerisation domain of Zinc Transporter SAGV88_00193 PF00005 ABC transporter SAGV88_00195 PF00528 Binding-protein-dependent transport system inner membrane component SAGV88_00196 PF02771 Acyl-CoA dehydrogenase, N-terminal domain SAGV88_00196 PF02770 Acyl-CoA dehydrogenase, middle domain SAGV88_00196 PF00441 Acyl-CoA dehydrogenase, C-terminal domain SAGV88_00197 PF10057 Uncharacterized conserved protein (DUF2294) SAGV88_00198 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain SAGV88_00198 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain SAGV88_00200 PF00668 Condensation domain SAGV88_00200 PF00975 Thioesterase domain SAGV88_00200 PF00550 Phosphopantetheine attachment site SAGV88_00200 PF13193 AMP-binding enzyme C-terminal domain SAGV88_00200 PF00501 AMP-binding enzyme SAGV88_00203 PF00696 Amino acid kinase family SAGV88_00204 PF01960 ArgJ family SAGV88_00205 PF01118 Semialdehyde dehydrogenase, NAD binding domain SAGV88_00205 PF02774 Semialdehyde dehydrogenase, dimerisation domain SAGV88_00206 PF00202 Aminotransferase class-III SAGV88_00207 PF05525 Branched-chain amino acid transport protein SAGV88_00208 PF00857 Isochorismatase family SAGV88_00209 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain SAGV88_00209 PF00205 Thiamine pyrophosphate enzyme, central domain SAGV88_00209 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain SAGV88_00211 PF02378 Phosphotransferase system, EIIC SAGV88_00211 PF00367 phosphotransferase system, EIIB SAGV88_00211 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 SAGV88_00214 PF02378 Phosphotransferase system, EIIC SAGV88_00214 PF00367 phosphotransferase system, EIIB SAGV88_00215 PF01380 SIS domain SAGV88_00215 PF01418 Helix-turn-helix domain, rpiR family SAGV88_00216 PF18766 SWI2/SNF2 ATPase SAGV88_00216 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) SAGV88_00216 PF12008 Type I restriction and modification enzyme - subunit R C terminal SAGV88_00218 PF00005 ABC transporter SAGV88_00218 PF08352 Oligopeptide/dipeptide transporter, C-terminal region SAGV88_00219 PF00528 Binding-protein-dependent transport system inner membrane component SAGV88_00220 PF12911 N-terminal TM domain of oligopeptide transport permease C SAGV88_00220 PF00528 Binding-protein-dependent transport system inner membrane component SAGV88_00225 PF02525 Flavodoxin-like fold SAGV88_00226 PF01551 Peptidase family M23 SAGV88_00226 PF08460 Bacterial SH3 domain SAGV88_00229 PF00005 ABC transporter SAGV88_00229 PF17912 MalK OB fold domain SAGV88_00229 PF03459 TOBE domain SAGV88_00233 PF00528 Binding-protein-dependent transport system inner membrane component SAGV88_00234 PF02894 Oxidoreductase family, C-terminal alpha/beta domain SAGV88_00234 PF01408 Oxidoreductase family, NAD-binding Rossmann fold SAGV88_00235 PF02894 Oxidoreductase family, C-terminal alpha/beta domain SAGV88_00235 PF01408 Oxidoreductase family, NAD-binding Rossmann fold SAGV88_00237 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family SAGV88_00240 PF12833 Helix-turn-helix domain SAGV88_00240 PF00072 Response regulator receiver domain SAGV88_00241 PF06580 Histidine kinase SAGV88_00244 PF01228 Glycine radical SAGV88_00244 PF02901 Pyruvate formate lyase-like SAGV88_00245 PF04055 Radical SAM superfamily SAGV88_00252 PF02803 Thiolase, C-terminal domain SAGV88_00252 PF00108 Thiolase, N-terminal domain SAGV88_00253 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain SAGV88_00253 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain SAGV88_00254 PF02771 Acyl-CoA dehydrogenase, N-terminal domain SAGV88_00254 PF02770 Acyl-CoA dehydrogenase, middle domain SAGV88_00254 PF00441 Acyl-CoA dehydrogenase, C-terminal domain SAGV88_00255 PF00501 AMP-binding enzyme SAGV88_00255 PF13193 AMP-binding enzyme C-terminal domain SAGV88_00256 PF01144 Coenzyme A transferase SAGV88_00259 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle SAGV88_00260 PF04343 Protein of unknown function, DUF488 SAGV88_00262 PF00970 Oxidoreductase FAD-binding domain SAGV88_00262 PF00175 Oxidoreductase NAD-binding domain SAGV88_00262 PF00042 Globin SAGV88_00264 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain SAGV88_00264 PF00056 lactate/malate dehydrogenase, NAD binding domain SAGV88_00266 PF02378 Phosphotransferase system, EIIC SAGV88_00266 PF00367 phosphotransferase system, EIIB SAGV88_00266 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 SAGV88_00267 PF01156 Inosine-uridine preferring nucleoside hydrolase SAGV88_00271 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SAGV88_00272 PF03611 PTS system sugar-specific permease component SAGV88_00273 PF08240 Alcohol dehydrogenase GroES-like domain SAGV88_00273 PF00107 Zinc-binding dehydrogenase SAGV88_00275 PF00107 Zinc-binding dehydrogenase SAGV88_00275 PF08240 Alcohol dehydrogenase GroES-like domain SAGV88_00276 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase SAGV88_00277 PF00107 Zinc-binding dehydrogenase SAGV88_00277 PF08240 Alcohol dehydrogenase GroES-like domain SAGV88_00278 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase SAGV88_00281 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase SAGV88_00282 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase SAGV88_00283 PF00107 Zinc-binding dehydrogenase SAGV88_00283 PF08240 Alcohol dehydrogenase GroES-like domain SAGV88_00284 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase SAGV88_00285 PF18674 TarS beta-glycosyltransferase C-terminal domain 1 SAGV88_00285 PF00535 Glycosyl transferase family 2 SAGV88_00286 PF01814 Hemerythrin HHE cation binding domain SAGV88_00286 PF04405 Domain of Unknown function (DUF542) SAGV88_00287 PF07694 5TMR of 5TMR-LYT SAGV88_00287 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SAGV88_00287 PF06580 Histidine kinase SAGV88_00288 PF04397 LytTr DNA-binding domain SAGV88_00288 PF00072 Response regulator receiver domain SAGV88_00289 PF03788 LrgA family SAGV88_00290 PF04172 LrgB-like family SAGV88_00291 PF00115 Cytochrome C and Quinol oxidase polypeptide I SAGV88_00292 PF00155 Aminotransferase class I and II SAGV88_00292 PF00392 Bacterial regulatory proteins, gntR family SAGV88_00293 PF00367 phosphotransferase system, EIIB SAGV88_00293 PF02378 Phosphotransferase system, EIIC SAGV88_00293 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 SAGV88_00294 PF00232 Glycosyl hydrolase family 1 SAGV88_00296 PF13649 Methyltransferase domain SAGV88_00297 PF00294 pfkB family carbohydrate kinase SAGV88_00298 PF05025 RbsD / FucU transport protein family SAGV88_00299 PF06800 Sugar transport protein SAGV88_00301 PF00356 Bacterial regulatory proteins, lacI family SAGV88_00304 PF07690 Major Facilitator Superfamily SAGV88_00305 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family SAGV88_00307 PF01551 Peptidase family M23 SAGV88_00308 PF00005 ABC transporter SAGV88_00312 PF01476 LysM domain SAGV88_00312 PF05257 CHAP domain SAGV88_00313 PF06013 Proteins of 100 residues with WXG SAGV88_00315 PF10661 WXG100 protein secretion system (Wss), protein EssA SAGV88_00316 PF08817 WXG100 protein secretion system (Wss), protein YukD SAGV88_00317 PF10140 WXG100 protein secretion system (Wss), protein YukC SAGV88_00318 PF12538 DNA transporter SAGV88_00318 PF01580 FtsK/SpoIIIE family SAGV88_00327 PF04634 Protein of unknown function, DUF600 SAGV88_00328 PF04634 Protein of unknown function, DUF600 SAGV88_00329 PF04634 Protein of unknown function, DUF600 SAGV88_00335 PF04634 Protein of unknown function, DUF600 SAGV88_00337 PF04634 Protein of unknown function, DUF600 SAGV88_00338 PF04634 Protein of unknown function, DUF600 SAGV88_00339 PF04634 Protein of unknown function, DUF600 SAGV88_00344 PF05525 Branched-chain amino acid transport protein SAGV88_00346 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) SAGV88_00347 PF02687 FtsX-like permease family SAGV88_00348 PF00005 ABC transporter SAGV88_00351 PF04227 Indigoidine synthase A like protein SAGV88_00352 PF01773 Na+ dependent nucleoside transporter N-terminus SAGV88_00352 PF07662 Na+ dependent nucleoside transporter C-terminus SAGV88_00353 PF00474 Sodium:solute symporter family SAGV88_00354 PF00701 Dihydrodipicolinate synthetase family SAGV88_00355 PF00480 ROK family SAGV88_00356 PF01418 Helix-turn-helix domain, rpiR family SAGV88_00356 PF01380 SIS domain SAGV88_00357 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase SAGV88_00358 PF07670 Nucleoside recognition SAGV88_00359 PF04650 YSIRK type signal peptide SAGV88_00361 PF00724 NADH:flavin oxidoreductase / NADH oxidase family SAGV88_00363 PF00296 Luciferase-like monooxygenase SAGV88_00364 PF01597 Glycine cleavage H-protein SAGV88_00365 PF01661 Macro domain SAGV88_00367 PF10437 Bacterial lipoate protein ligase C-terminus SAGV88_00367 PF03099 Biotin/lipoate A/B protein ligase family SAGV88_00368 PF16363 GDP-mannose 4,6 dehydratase SAGV88_00369 PF03611 PTS system sugar-specific permease component SAGV88_00371 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 SAGV88_00372 PF03123 CAT RNA binding domain SAGV88_00372 PF00874 PRD domain SAGV88_00374 PF01554 MatE SAGV88_00378 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily SAGV88_00379 PF00296 Luciferase-like monooxygenase SAGV88_00380 PF03358 NADPH-dependent FMN reductase SAGV88_00381 PF03601 Conserved hypothetical protein 698 SAGV88_00383 PF13302 Acetyltransferase (GNAT) domain SAGV88_00384 PF09375 Imelysin SAGV88_00385 PF04261 Dyp-type peroxidase family SAGV88_00386 PF03239 Iron permease FTR1 family SAGV88_00387 PF00902 Sec-independent protein translocase protein (TatC) SAGV88_00388 PF02416 mttA/Hcf106 family SAGV88_00390 PF01381 Helix-turn-helix SAGV88_00392 PF00005 ABC transporter SAGV88_00394 PF09299 Mu transposase, C-terminal SAGV88_00394 PF00665 Integrase core domain SAGV88_00395 PF02796 Helix-turn-helix domain of resolvase SAGV88_00395 PF00239 Resolvase, N terminal domain SAGV88_00396 PF13977 BetI-type transcriptional repressor, C-terminal SAGV88_00396 PF00440 Bacterial regulatory proteins, tetR family SAGV88_00400 PF08241 Methyltransferase domain SAGV88_00401 PF04439 Streptomycin adenylyltransferase SAGV88_00402 PF00583 Acetyltransferase (GNAT) family SAGV88_00403 PF01636 Phosphotransferase enzyme family SAGV88_00404 PF08279 HTH domain SAGV88_00404 PF13280 WYL domain SAGV88_00412 PF00108 Thiolase, N-terminal domain SAGV88_00412 PF02803 Thiolase, C-terminal domain SAGV88_00414 PF08267 Cobalamin-independent synthase, N-terminal domain SAGV88_00414 PF01717 Cobalamin-independent synthase, Catalytic domain SAGV88_00416 PF01053 Cys/Met metabolism PLP-dependent enzyme SAGV88_00417 PF01053 Cys/Met metabolism PLP-dependent enzyme SAGV88_00419 PF17762 HTH domain found in ParB protein SAGV88_00419 PF02195 ParB-like nuclease domain SAGV88_00420 PF00924 Mechanosensitive ion channel SAGV88_00421 PF06107 Bacterial protein of unknown function (DUF951) SAGV88_00422 PF06071 Protein of unknown function (DUF933) SAGV88_00422 PF01926 50S ribosome-binding GTPase SAGV88_00424 PF01250 Ribosomal protein S6 SAGV88_00425 PF00436 Single-strand binding protein family SAGV88_00426 PF01084 Ribosomal protein S18 SAGV88_00429 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain SAGV88_00441 PF10417 C-terminal domain of 1-Cys peroxiredoxin SAGV88_00441 PF00578 AhpC/TSA family SAGV88_00442 PF00881 Nitroreductase family SAGV88_00443 PF00375 Sodium:dicarboxylate symporter family SAGV88_00446 PF11181 Heat induced stress protein YflT SAGV88_00449 PF00860 Permease family SAGV88_00450 PF00478 IMP dehydrogenase / GMP reductase domain SAGV88_00450 PF00571 CBS domain SAGV88_00451 PF00958 GMP synthase C terminal domain SAGV88_00451 PF00117 Glutamine amidotransferase class-I SAGV88_00452 PF00589 Phage integrase family SAGV88_00452 PF14659 Phage integrase, N-terminal SAM-like domain SAGV88_00457 PF00009 Elongation factor Tu GTP binding domain SAGV88_00457 PF03764 Elongation factor G, domain IV SAGV88_00457 PF14492 Elongation Factor G, domain II SAGV88_00457 PF00679 Elongation factor G C-terminus SAGV88_00459 PF00877 NlpC/P60 family SAGV88_00463 PF01695 IstB-like ATP binding protein SAGV88_00469 PF18106 Rolling Circle replication initiation protein N-terminal domain SAGV88_00469 PF02486 Replication initiation factor SAGV88_00474 PF00580 UvrD/REP helicase N-terminal domain SAGV88_00474 PF13361 UvrD-like helicase C-terminal domain SAGV88_00475 PF02463 RecF/RecN/SMC N terminal domain SAGV88_00476 PF00872 Transposase, Mutator family SAGV88_00481 PF06993 Protein of unknown function (DUF1304) SAGV88_00484 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain SAGV88_00484 PF09199 Staphylococcal superantigen-like OB-fold domain SAGV88_00485 PF09199 Staphylococcal superantigen-like OB-fold domain SAGV88_00485 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain SAGV88_00486 PF09199 Staphylococcal superantigen-like OB-fold domain SAGV88_00486 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain SAGV88_00488 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain SAGV88_00488 PF09199 Staphylococcal superantigen-like OB-fold domain SAGV88_00489 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain SAGV88_00489 PF09199 Staphylococcal superantigen-like OB-fold domain SAGV88_00490 PF09199 Staphylococcal superantigen-like OB-fold domain SAGV88_00490 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain SAGV88_00490 PF09199 Staphylococcal superantigen-like OB-fold domain SAGV88_00490 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain SAGV88_00491 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain SAGV88_00491 PF09199 Staphylococcal superantigen-like OB-fold domain SAGV88_00492 PF09199 Staphylococcal superantigen-like OB-fold domain SAGV88_00492 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain SAGV88_00493 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain SAGV88_00493 PF09199 Staphylococcal superantigen-like OB-fold domain SAGV88_00494 PF09199 Staphylococcal superantigen-like OB-fold domain SAGV88_00494 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain SAGV88_00496 PF02384 N-6 DNA Methylase SAGV88_00496 PF12161 HsdM N-terminal domain SAGV88_00498 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain SAGV88_00498 PF09199 Staphylococcal superantigen-like OB-fold domain SAGV88_00501 PF04507 Csa1 family SAGV88_00502 PF04507 Csa1 family SAGV88_00503 PF04507 Csa1 family SAGV88_00504 PF04507 Csa1 family SAGV88_00505 PF04507 Csa1 family SAGV88_00506 PF04507 Csa1 family SAGV88_00507 PF04507 Csa1 family SAGV88_00508 PF04507 Csa1 family SAGV88_00509 PF04507 Csa1 family SAGV88_00511 PF04507 Csa1 family SAGV88_00516 PF02492 CobW/HypB/UreG, nucleotide-binding domain SAGV88_00516 PF07683 Cobalamin synthesis protein cobW C-terminal domain SAGV88_00524 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus SAGV88_00524 PF00361 Proton-conducting membrane transporter SAGV88_00525 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) SAGV88_00526 PF10057 Uncharacterized conserved protein (DUF2294) SAGV88_00529 PF12146 Serine aminopeptidase, S33 SAGV88_00531 PF00209 Sodium:neurotransmitter symporter family SAGV88_00532 PF00291 Pyridoxal-phosphate dependent enzyme SAGV88_00533 PF01053 Cys/Met metabolism PLP-dependent enzyme SAGV88_00534 PF00005 ABC transporter SAGV88_00534 PF09383 NIL domain SAGV88_00535 PF00528 Binding-protein-dependent transport system inner membrane component SAGV88_00536 PF03180 NLPA lipoprotein SAGV88_00537 PF01476 LysM domain SAGV88_00537 PF05257 CHAP domain SAGV88_00544 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SAGV88_00544 PF03466 LysR substrate binding domain SAGV88_00545 PF01493 GXGXG motif SAGV88_00545 PF00310 Glutamine amidotransferases class-II SAGV88_00545 PF04898 Glutamate synthase central domain SAGV88_00545 PF01645 Conserved region in glutamate synthase SAGV88_00546 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster SAGV88_00546 PF07992 Pyridine nucleotide-disulphide oxidoreductase SAGV88_00548 PF00367 phosphotransferase system, EIIB SAGV88_00548 PF02378 Phosphotransferase system, EIIC SAGV88_00549 PF16657 Maltogenic Amylase, C-terminal domain SAGV88_00549 PF00128 Alpha amylase, catalytic domain SAGV88_00550 PF07702 UTRA domain SAGV88_00550 PF00392 Bacterial regulatory proteins, gntR family SAGV88_00552 PF12169 DNA polymerase III subunits gamma and tau domain III SAGV88_00553 PF02575 YbaB/EbfC DNA-binding family SAGV88_00554 PF02132 RecR protein SAGV88_00554 PF13662 Toprim domain SAGV88_00565 PF01276 Orn/Lys/Arg decarboxylase, major domain SAGV88_00565 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain SAGV88_00566 PF02223 Thymidylate kinase SAGV88_00567 PF06153 Cyclic-di-AMP receptor SAGV88_00568 PF09115 DNA polymerase III, delta subunit, C terminal SAGV88_00569 PF04468 PSP1 C-terminal conserved region SAGV88_00570 PF06156 Initiation control protein YabA SAGV88_00571 PF05175 Methyltransferase small domain SAGV88_00572 PF01541 GIY-YIG catalytic domain SAGV88_00573 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases SAGV88_00575 PF08264 Anticodon-binding domain of tRNA SAGV88_00575 PF09334 tRNA synthetases class I (M) SAGV88_00575 PF01588 Putative tRNA binding domain SAGV88_00576 PF01026 TatD related DNase SAGV88_00577 PF13331 Domain of unknown function (DUF4093) SAGV88_00577 PF01751 Toprim domain SAGV88_00578 PF00398 Ribosomal RNA adenine dimethylase SAGV88_00579 PF06257 Biofilm formation stimulator VEG SAGV88_00580 PF08544 GHMP kinases C terminal SAGV88_00580 PF00288 GHMP kinases N terminal domain SAGV88_00581 PF09182 Bacterial purine repressor, N-terminal SAGV88_00581 PF00156 Phosphoribosyl transferase domain SAGV88_00582 PF01042 Endoribonuclease L-PSP SAGV88_00583 PF04026 SpoVG SAGV88_00586 PF00483 Nucleotidyl transferase SAGV88_00586 PF00132 Bacterial transferase hexapeptide (six repeats) SAGV88_00587 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase SAGV88_00587 PF14572 Phosphoribosyl synthetase-associated domain SAGV88_00588 PF01386 Ribosomal L25p family SAGV88_00588 PF14693 Ribosomal protein TL5, C-terminal domain SAGV88_00589 PF01195 Peptidyl-tRNA hydrolase SAGV88_00590 PF17757 UvrB interaction domain SAGV88_00590 PF02559 CarD-like/TRCF domain SAGV88_00590 PF03461 TRCF domain SAGV88_00590 PF00270 DEAD/DEAH box helicase SAGV88_00590 PF00271 Helicase conserved C-terminal domain SAGV88_00591 PF14667 Polysaccharide biosynthesis C-terminal domain SAGV88_00591 PF01943 Polysaccharide biosynthesis protein SAGV88_00592 PF03819 MazG nucleotide pyrophosphohydrolase domain SAGV88_00592 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases SAGV88_00593 PF01479 S4 domain SAGV88_00595 PF00575 S1 RNA binding domain SAGV88_00596 PF01171 PP-loop family SAGV88_00596 PF11734 TilS substrate C-terminal domain SAGV88_00597 PF00156 Phosphoribosyl transferase domain SAGV88_00599 PF00004 ATPase family associated with various cellular activities (AAA) SAGV88_00599 PF17862 AAA+ lid domain SAGV88_00599 PF06480 FtsH Extracellular SAGV88_00599 PF01434 Peptidase family M41 SAGV88_00600 PF01430 Hsp33 protein SAGV88_00601 PF00291 Pyridoxal-phosphate dependent enzyme SAGV88_00602 PF00809 Pterin binding enzyme SAGV88_00603 PF02152 Dihydroneopterin aldolase SAGV88_00604 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) SAGV88_00606 PF01336 OB-fold nucleic acid binding domain SAGV88_00606 PF00152 tRNA synthetases class II (D, K and N) SAGV88_00618 PF00155 Aminotransferase class I and II SAGV88_00618 PF00392 Bacterial regulatory proteins, gntR family SAGV88_00619 PF01680 SOR/SNZ family SAGV88_00620 PF01174 SNO glutamine amidotransferase family SAGV88_00621 PF07662 Na+ dependent nucleoside transporter C-terminus SAGV88_00621 PF01773 Na+ dependent nucleoside transporter N-terminus SAGV88_00622 PF05848 CtsR N-terminal HTH domain SAGV88_00622 PF17727 CtsR C-terminal dimerization domain SAGV88_00623 PF02151 UvrB/uvrC motif SAGV88_00624 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain SAGV88_00625 PF07724 AAA domain (Cdc48 subfamily) SAGV88_00625 PF02861 Clp amino terminal domain, pathogenicity island component SAGV88_00625 PF17871 AAA lid domain SAGV88_00625 PF00004 ATPase family associated with various cellular activities (AAA) SAGV88_00625 PF10431 C-terminal, D2-small domain, of ClpB protein SAGV88_00626 PF18073 Rubredoxin metal binding domain SAGV88_00628 PF00749 tRNA synthetases class I (E and Q), catalytic domain SAGV88_00629 PF00132 Bacterial transferase hexapeptide (six repeats) SAGV88_00630 PF01406 tRNA synthetases class I (C) catalytic domain SAGV88_00630 PF09190 DALR domain SAGV88_00631 PF00636 Ribonuclease III domain SAGV88_00632 PF08032 RNA 2'-O ribose methyltransferase substrate binding SAGV88_00632 PF00588 SpoU rRNA Methylase family SAGV88_00635 PF00584 SecE/Sec61-gamma subunits of protein translocation complex SAGV88_00636 PF02357 Transcription termination factor nusG SAGV88_00636 PF00467 KOW motif SAGV88_00637 PF00298 Ribosomal protein L11, RNA binding domain SAGV88_00637 PF03946 Ribosomal protein L11, N-terminal domain SAGV88_00638 PF00687 Ribosomal protein L1p/L10e family SAGV88_00639 PF00466 Ribosomal protein L10 SAGV88_00640 PF00542 Ribosomal protein L7/L12 C-terminal domain SAGV88_00640 PF16320 Ribosomal protein L7/L12 dimerisation domain SAGV88_00641 PF05175 Methyltransferase small domain SAGV88_00642 PF04563 RNA polymerase beta subunit SAGV88_00642 PF04561 RNA polymerase Rpb2, domain 2 SAGV88_00642 PF10385 RNA polymerase beta subunit external 1 domain SAGV88_00642 PF00562 RNA polymerase Rpb2, domain 6 SAGV88_00642 PF04560 RNA polymerase Rpb2, domain 7 SAGV88_00642 PF04565 RNA polymerase Rpb2, domain 3 SAGV88_00643 PF04997 RNA polymerase Rpb1, domain 1 SAGV88_00643 PF00623 RNA polymerase Rpb1, domain 2 SAGV88_00643 PF04998 RNA polymerase Rpb1, domain 5 SAGV88_00643 PF05000 RNA polymerase Rpb1, domain 4 SAGV88_00643 PF04983 RNA polymerase Rpb1, domain 3 SAGV88_00644 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family SAGV88_00645 PF00164 Ribosomal protein S12/S23 SAGV88_00646 PF00177 Ribosomal protein S7p/S5e SAGV88_00647 PF03144 Elongation factor Tu domain 2 SAGV88_00647 PF03764 Elongation factor G, domain IV SAGV88_00647 PF14492 Elongation Factor G, domain II SAGV88_00647 PF00009 Elongation factor Tu GTP binding domain SAGV88_00647 PF00679 Elongation factor G C-terminus SAGV88_00648 PF03143 Elongation factor Tu C-terminal domain SAGV88_00648 PF03144 Elongation factor Tu domain 2 SAGV88_00648 PF00009 Elongation factor Tu GTP binding domain SAGV88_00649 PF07687 Peptidase dimerisation domain SAGV88_00649 PF01546 Peptidase family M20/M25/M40 SAGV88_00650 PF00155 Aminotransferase class I and II SAGV88_00651 PF01965 DJ-1/PfpI family SAGV88_00652 PF02782 FGGY family of carbohydrate kinases, C-terminal domain SAGV88_00652 PF00370 FGGY family of carbohydrate kinases, N-terminal domain SAGV88_00653 PF01370 NAD dependent epimerase/dehydratase family SAGV88_00654 PF01063 Amino-transferase class IV SAGV88_00657 PF01712 Deoxynucleoside kinase SAGV88_00658 PF01712 Deoxynucleoside kinase SAGV88_00659 PF14437 MafB19-like deaminase SAGV88_00661 PF03358 NADPH-dependent FMN reductase SAGV88_00662 PF17961 Bacterial Ig domain SAGV88_00662 PF17210 SdrD B-like domain SAGV88_00662 PF10425 C-terminus of bacterial fibrinogen-binding adhesin SAGV88_00662 PF04650 YSIRK type signal peptide SAGV88_00662 PF00746 LPXTG cell wall anchor motif SAGV88_00663 PF04650 YSIRK type signal peptide SAGV88_00663 PF10425 C-terminus of bacterial fibrinogen-binding adhesin SAGV88_00663 PF17961 Bacterial Ig domain SAGV88_00663 PF00746 LPXTG cell wall anchor motif SAGV88_00663 PF17210 SdrD B-like domain SAGV88_00664 PF00746 LPXTG cell wall anchor motif SAGV88_00664 PF04650 YSIRK type signal peptide SAGV88_00664 PF10425 C-terminus of bacterial fibrinogen-binding adhesin SAGV88_00664 PF17210 SdrD B-like domain SAGV88_00664 PF17961 Bacterial Ig domain SAGV88_00665 PF00534 Glycosyl transferases group 1 SAGV88_00667 PF02649 Type I GTP cyclohydrolase folE2 SAGV88_00668 PF02585 GlcNAc-PI de-N-acetylase SAGV88_00670 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase SAGV88_00671 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family SAGV88_00672 PF01380 SIS domain SAGV88_00676 PF07690 Major Facilitator Superfamily SAGV88_00677 PF00501 AMP-binding enzyme SAGV88_00677 PF13193 AMP-binding enzyme C-terminal domain SAGV88_00678 PF02803 Thiolase, C-terminal domain SAGV88_00678 PF00108 Thiolase, N-terminal domain SAGV88_00681 PF17412 Family of unknown function SAGV88_00682 PF08543 Phosphomethylpyrimidine kinase SAGV88_00683 PF03167 Uracil DNA glycosylase superfamily SAGV88_00685 PF04241 Protein of unknown function (DUF423) SAGV88_00690 PF06778 Chlorite dismutase SAGV88_00691 PF01515 Phosphate acetyl/butaryl transferase SAGV88_00692 PF03099 Biotin/lipoate A/B protein ligase family SAGV88_00693 PF08544 GHMP kinases C terminal SAGV88_00693 PF00288 GHMP kinases N terminal domain SAGV88_00695 PF00288 GHMP kinases N terminal domain SAGV88_00695 PF08544 GHMP kinases C terminal SAGV88_00696 PF07293 Protein of unknown function (DUF1450) SAGV88_00697 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain SAGV88_00697 PF07992 Pyridine nucleotide-disulphide oxidoreductase SAGV88_00708 PF00248 Aldo/keto reductase family SAGV88_00709 PF03358 NADPH-dependent FMN reductase SAGV88_00711 PF01966 HD domain SAGV88_00712 PF08741 YwhD family SAGV88_00713 PF08240 Alcohol dehydrogenase GroES-like domain SAGV88_00713 PF00107 Zinc-binding dehydrogenase SAGV88_00716 PF03485 Arginyl tRNA synthetase N terminal domain SAGV88_00716 PF05746 DALR anticodon binding domain SAGV88_00716 PF00750 tRNA synthetases class I (R) SAGV88_00719 PF01497 Periplasmic binding protein SAGV88_00720 PF01032 FecCD transport family SAGV88_00721 PF13419 Haloacid dehalogenase-like hydrolase SAGV88_00725 PF12697 Alpha/beta hydrolase family SAGV88_00731 PF00589 Phage integrase family SAGV88_00732 PF13244 Domain of unknown function (DUF4040) SAGV88_00732 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus SAGV88_00732 PF00361 Proton-conducting membrane transporter SAGV88_00733 PF00361 Proton-conducting membrane transporter SAGV88_00733 PF13244 Domain of unknown function (DUF4040) SAGV88_00733 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus SAGV88_00734 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter SAGV88_00735 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L SAGV88_00736 PF00361 Proton-conducting membrane transporter SAGV88_00737 PF01899 Na+/H+ ion antiporter subunit SAGV88_00738 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) SAGV88_00739 PF03334 Na+/H+ antiporter subunit SAGV88_00740 PF00999 Sodium/hydrogen exchanger family SAGV88_00742 PF01297 Zinc-uptake complex component A periplasmic SAGV88_00743 PF00950 ABC 3 transport family SAGV88_00744 PF00005 ABC transporter SAGV88_00745 PF01325 Iron dependent repressor, N-terminal DNA binding domain SAGV88_00745 PF18357 Diphteria toxin repressor SH3 domain SAGV88_00745 PF02742 Iron dependent repressor, metal binding and dimerisation domain SAGV88_00747 PF03808 Glycosyl transferase WecB/TagA/CpsF family SAGV88_00748 PF00005 ABC transporter SAGV88_00749 PF01061 ABC-2 type transporter SAGV88_00750 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase SAGV88_00751 PF00535 Glycosyl transferase family 2 SAGV88_00752 PF01467 Cytidylyltransferase-like SAGV88_00753 PF00768 D-alanyl-D-alanine carboxypeptidase SAGV88_00753 PF07943 Penicillin-binding protein 5, C-terminal domain SAGV88_00754 PF00664 ABC transporter transmembrane region SAGV88_00754 PF00005 ABC transporter SAGV88_00756 PF01773 Na+ dependent nucleoside transporter N-terminus SAGV88_00756 PF07662 Na+ dependent nucleoside transporter C-terminus SAGV88_00757 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 SAGV88_00757 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) SAGV88_00758 PF00005 ABC transporter SAGV88_00759 PF01032 FecCD transport family SAGV88_00760 PF01032 FecCD transport family SAGV88_00761 PF02733 Dak1 domain SAGV88_00762 PF02734 DAK2 domain SAGV88_00763 PF03610 PTS system fructose IIA component SAGV88_00770 PF01370 NAD dependent epimerase/dehydratase family SAGV88_00771 PF00486 Transcriptional regulatory protein, C terminal SAGV88_00771 PF00072 Response regulator receiver domain SAGV88_00772 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SAGV88_00773 PF00005 ABC transporter SAGV88_00774 PF02687 FtsX-like permease family SAGV88_00775 PF01865 Protein of unknown function DUF47 SAGV88_00776 PF01384 Phosphate transporter family SAGV88_00777 PF05257 CHAP domain SAGV88_00777 PF01476 LysM domain SAGV88_00779 PF02311 AraC-like ligand binding domain SAGV88_00779 PF12833 Helix-turn-helix domain SAGV88_00781 PF01709 Transcriptional regulator SAGV88_00785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SAGV88_00785 PF03466 LysR substrate binding domain SAGV88_00786 PF07690 Major Facilitator Superfamily SAGV88_00787 PF04306 Protein of unknown function (DUF456) SAGV88_00793 PF13302 Acetyltransferase (GNAT) domain SAGV88_00794 PF03641 Possible lysine decarboxylase SAGV88_00795 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 SAGV88_00797 PF02673 Bacitracin resistance protein BacA SAGV88_00798 PF00005 ABC transporter SAGV88_00798 PF00664 ABC transporter transmembrane region SAGV88_00799 PF00664 ABC transporter transmembrane region SAGV88_00799 PF00005 ABC transporter SAGV88_00800 PF01047 MarR family SAGV88_00803 PF00248 Aldo/keto reductase family SAGV88_00805 PF00939 Sodium:sulfate symporter transmembrane region SAGV88_00806 PF03441 FAD binding domain of DNA photolyase SAGV88_00806 PF00875 DNA photolyase SAGV88_00812 PF07690 Major Facilitator Superfamily SAGV88_00814 PF04073 Aminoacyl-tRNA editing domain SAGV88_00815 PF00455 DeoR C terminal sensor domain SAGV88_00815 PF08220 DeoR-like helix-turn-helix domain SAGV88_00816 PF00294 pfkB family carbohydrate kinase SAGV88_00817 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 SAGV88_00817 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SAGV88_00818 PF01979 Amidohydrolase family SAGV88_00819 PF00571 CBS domain SAGV88_00819 PF01595 Cyclin M transmembrane N-terminal domain SAGV88_00819 PF03471 Transporter associated domain SAGV88_00820 PF00248 Aldo/keto reductase family SAGV88_00821 PF00535 Glycosyl transferase family 2 SAGV88_00822 PF00512 His Kinase A (phospho-acceptor) domain SAGV88_00822 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SAGV88_00823 PF00072 Response regulator receiver domain SAGV88_00823 PF00486 Transcriptional regulatory protein, C terminal SAGV88_00827 PF04055 Radical SAM superfamily SAGV88_00828 PF01242 6-pyruvoyl tetrahydropterin synthase SAGV88_00829 PF06508 Queuosine biosynthesis protein QueC SAGV88_00831 PF00591 Glycosyl transferase family, a/b domain SAGV88_00831 PF00117 Glutamine amidotransferase class-I SAGV88_00831 PF02885 Glycosyl transferase family, helical bundle domain SAGV88_00832 PF00425 chorismate binding enzyme SAGV88_00832 PF04715 Anthranilate synthase component I, N terminal region SAGV88_00838 PF00884 Sulfatase SAGV88_00839 PF00005 ABC transporter SAGV88_00839 PF12848 ABC transporter SAGV88_00839 PF16326 ABC transporter C-terminal domain SAGV88_00840 PF09382 RQC domain SAGV88_00840 PF00270 DEAD/DEAH box helicase SAGV88_00840 PF00570 HRDC domain SAGV88_00840 PF00271 Helicase conserved C-terminal domain SAGV88_00840 PF16124 RecQ zinc-binding SAGV88_00841 PF00005 ABC transporter SAGV88_00841 PF00571 CBS domain SAGV88_00842 PF00528 Binding-protein-dependent transport system inner membrane component SAGV88_00843 PF00155 Aminotransferase class I and II SAGV88_00845 PF06941 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) SAGV88_00847 PF00781 Diacylglycerol kinase catalytic domain SAGV88_00848 PF00854 POT family SAGV88_00849 PF14489 QueF-like protein SAGV88_00853 PF00268 Ribonucleotide reductase, small chain SAGV88_00855 PF01032 FecCD transport family SAGV88_00856 PF01032 FecCD transport family SAGV88_00857 PF00005 ABC transporter SAGV88_00858 PF01497 Periplasmic binding protein SAGV88_00860 PF01565 FAD binding domain SAGV88_00860 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain SAGV88_00864 PF02595 Glycerate kinase family SAGV88_00865 PF01546 Peptidase family M20/M25/M40 SAGV88_00865 PF07687 Peptidase dimerisation domain SAGV88_00868 PF00990 Diguanylate cyclase, GGDEF domain SAGV88_00868 PF07694 5TMR of 5TMR-LYT SAGV88_00869 PF00953 Glycosyl transferase family 4 SAGV88_00870 PF09186 Domain of unknown function (DUF1949) SAGV88_00870 PF01205 Uncharacterized protein family UPF0029 SAGV88_00871 PF02645 Uncharacterised protein, DegV family COG1307 SAGV88_00873 PF04851 Type III restriction enzyme, res subunit SAGV88_00873 PF00271 Helicase conserved C-terminal domain SAGV88_00876 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus SAGV88_00876 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein SAGV88_00877 PF01043 SecA preprotein cross-linking domain SAGV88_00877 PF07516 SecA Wing and Scaffold domain SAGV88_00877 PF02810 SEC-C motif SAGV88_00877 PF07517 SecA DEAD-like domain SAGV88_00878 PF00472 RF-1 domain SAGV88_00878 PF03462 PCRF domain SAGV88_00879 PF00472 RF-1 domain SAGV88_00879 PF03462 PCRF domain SAGV88_00880 PF01476 LysM domain SAGV88_00880 PF05257 CHAP domain SAGV88_00883 PF02151 UvrB/uvrC motif SAGV88_00883 PF17757 UvrB interaction domain SAGV88_00883 PF04851 Type III restriction enzyme, res subunit SAGV88_00883 PF00271 Helicase conserved C-terminal domain SAGV88_00883 PF12344 Ultra-violet resistance protein B SAGV88_00884 PF17760 UvrA interaction domain SAGV88_00884 PF17755 UvrA DNA-binding domain SAGV88_00884 PF00005 ABC transporter SAGV88_00886 PF02603 HPr Serine kinase N terminus SAGV88_00886 PF07475 HPr Serine kinase C-terminal domain SAGV88_00887 PF01790 Prolipoprotein diacylglyceryl transferase SAGV88_00888 PF14602 Hexapeptide repeat of succinyl-transferase SAGV88_00890 PF07992 Pyridine nucleotide-disulphide oxidoreductase SAGV88_00892 PF03668 P-loop ATPase protein family SAGV88_00893 PF01933 Uncharacterised protein family UPF0052 SAGV88_00895 PF02650 WhiA C-terminal HTH domain SAGV88_00895 PF14527 WhiA LAGLIDADG-like domain SAGV88_00895 PF10298 WhiA N-terminal LAGLIDADG-like domain SAGV88_00896 PF00574 Clp protease SAGV88_00897 PF01370 NAD dependent epimerase/dehydratase family SAGV88_00897 PF08338 Domain of unknown function (DUF1731) SAGV88_00900 PF04198 Putative sugar-binding domain SAGV88_00901 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain SAGV88_00901 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain SAGV88_00902 PF00162 Phosphoglycerate kinase SAGV88_00903 PF00121 Triosephosphate isomerase SAGV88_00904 PF06415 BPG-independent PGAM N-terminus (iPGM_N) SAGV88_00904 PF01676 Metalloenzyme superfamily SAGV88_00905 PF00113 Enolase, C-terminal TIM barrel domain SAGV88_00905 PF03952 Enolase, N-terminal domain SAGV88_00907 PF03840 Preprotein translocase SecG subunit SAGV88_00908 PF12146 Serine aminopeptidase, S33 SAGV88_00909 PF00575 S1 RNA binding domain SAGV88_00909 PF00773 RNB domain SAGV88_00909 PF08206 Ribonuclease B OB domain SAGV88_00909 PF17876 Cold shock domain SAGV88_00910 PF01668 SmpB protein SAGV88_00918 PF04650 YSIRK type signal peptide SAGV88_00918 PF10425 C-terminus of bacterial fibrinogen-binding adhesin SAGV88_00918 PF00746 LPXTG cell wall anchor motif SAGV88_00918 PF17961 Bacterial Ig domain SAGV88_00923 PF00565 Staphylococcal nuclease homologue SAGV88_00925 PF00313 'Cold-shock' DNA-binding domain SAGV88_00933 PF00300 Histidine phosphatase superfamily (branch 1) SAGV88_00934 PF01810 LysE type translocator SAGV88_00937 PF02566 OsmC-like protein SAGV88_00938 PF01487 Type I 3-dehydroquinase SAGV88_00940 PF00085 Thioredoxin SAGV88_00941 PF03960 ArsC family SAGV88_00942 PF01597 Glycine cleavage H-protein SAGV88_00944 PF09234 Domain of unknown function (DUF1963) SAGV88_00946 PF01751 Toprim domain SAGV88_00948 PF00005 ABC transporter SAGV88_00948 PF09383 NIL domain SAGV88_00949 PF00528 Binding-protein-dependent transport system inner membrane component SAGV88_00950 PF03180 NLPA lipoprotein SAGV88_00951 PF14659 Phage integrase, N-terminal SAM-like domain SAGV88_00951 PF00589 Phage integrase family SAGV88_00970 PF10668 Phage terminase small subunit SAGV88_00970 PF03592 Terminase small subunit SAGV88_00974 PF05532 CsbD-like SAGV88_00976 PF00005 ABC transporter SAGV88_00977 PF01458 Uncharacterized protein family (UPF0051) SAGV88_00978 PF00266 Aminotransferase class-V SAGV88_00979 PF01592 NifU-like N terminal domain SAGV88_00980 PF01458 Uncharacterized protein family (UPF0051) SAGV88_00984 PF00571 CBS domain SAGV88_00984 PF01595 Cyclin M transmembrane N-terminal domain SAGV88_00984 PF03471 Transporter associated domain SAGV88_00985 PF03060 Nitronate monooxygenase SAGV88_00986 PF01904 Protein of unknown function DUF72 SAGV88_00987 PF01925 Sulfite exporter TauE/SafE SAGV88_00989 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family SAGV88_00989 PF04055 Radical SAM superfamily SAGV88_00990 PF06265 Protein of unknown function (DUF1027) SAGV88_00992 PF01934 Protein of unknown function DUF86 SAGV88_00993 PF13344 Haloacid dehalogenase-like hydrolase SAGV88_00994 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain SAGV88_00994 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain SAGV88_00997 PF13193 AMP-binding enzyme C-terminal domain SAGV88_00997 PF00501 AMP-binding enzyme SAGV88_00998 PF03062 MBOAT, membrane-bound O-acyltransferase family SAGV88_00999 PF00550 Phosphopantetheine attachment site SAGV88_01000 PF04914 DltD protein SAGV88_01001 PF01106 NifU-like domain SAGV88_01002 PF07315 Protein of unknown function (DUF1462) SAGV88_01003 PF07992 Pyridine nucleotide-disulphide oxidoreductase SAGV88_01004 PF07293 Protein of unknown function (DUF1450) SAGV88_01005 PF01521 Iron-sulphur cluster biosynthesis SAGV88_01006 PF07992 Pyridine nucleotide-disulphide oxidoreductase SAGV88_01007 PF00883 Cytosol aminopeptidase family, catalytic domain SAGV88_01007 PF02789 Cytosol aminopeptidase family, N-terminal domain SAGV88_01009 PF03553 Na+/H+ antiporter family SAGV88_01009 PF13726 Na+-H+ antiporter family SAGV88_01010 PF03061 Thioesterase superfamily SAGV88_01012 PF03334 Na+/H+ antiporter subunit SAGV88_01013 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) SAGV88_01014 PF01899 Na+/H+ ion antiporter subunit SAGV88_01015 PF00361 Proton-conducting membrane transporter SAGV88_01016 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L SAGV88_01017 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter SAGV88_01018 PF13244 Domain of unknown function (DUF4040) SAGV88_01018 PF00361 Proton-conducting membrane transporter SAGV88_01018 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus SAGV88_01020 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD SAGV88_01021 PF00575 S1 RNA binding domain SAGV88_01022 PF00724 NADH:flavin oxidoreductase / NADH oxidase family SAGV88_01023 PF00202 Aminotransferase class-III SAGV88_01024 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain SAGV88_01024 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase SAGV88_01025 PF03009 Glycerophosphoryl diester phosphodiesterase family SAGV88_01026 PF00206 Lyase SAGV88_01026 PF14698 Argininosuccinate lyase C-terminal SAGV88_01027 PF00764 Arginosuccinate synthase SAGV88_01028 PF00342 Phosphoglucose isomerase SAGV88_01030 PF09335 SNARE associated Golgi protein SAGV88_01031 PF10502 Signal peptidase, peptidase S26 SAGV88_01032 PF10502 Signal peptidase, peptidase S26 SAGV88_01033 PF12705 PD-(D/E)XK nuclease superfamily SAGV88_01033 PF13361 UvrD-like helicase C-terminal domain SAGV88_01034 PF13361 UvrD-like helicase C-terminal domain SAGV88_01034 PF00580 UvrD/REP helicase N-terminal domain SAGV88_01034 PF12705 PD-(D/E)XK nuclease superfamily SAGV88_01035 PF01557 Fumarylacetoacetate (FAA) hydrolase family SAGV88_01036 PF07457 Protein of unknown function (DUF1516) SAGV88_01037 PF07992 Pyridine nucleotide-disulphide oxidoreductase SAGV88_01037 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain SAGV88_01039 PF01883 Iron-sulfur cluster assembly protein SAGV88_01040 PF01757 Acyltransferase family SAGV88_01041 PF00004 ATPase family associated with various cellular activities (AAA) SAGV88_01041 PF10431 C-terminal, D2-small domain, of ClpB protein SAGV88_01041 PF07724 AAA domain (Cdc48 subfamily) SAGV88_01041 PF17871 AAA lid domain SAGV88_01041 PF02861 Clp amino terminal domain, pathogenicity island component SAGV88_01047 PF01161 Phosphatidylethanolamine-binding protein SAGV88_01048 PF03642 MAP domain SAGV88_01050 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III SAGV88_01050 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal SAGV88_01051 PF00109 Beta-ketoacyl synthase, N-terminal domain SAGV88_01051 PF02801 Beta-ketoacyl synthase, C-terminal domain SAGV88_01053 PF00528 Binding-protein-dependent transport system inner membrane component SAGV88_01054 PF00528 Binding-protein-dependent transport system inner membrane component SAGV88_01054 PF12911 N-terminal TM domain of oligopeptide transport permease C SAGV88_01055 PF08352 Oligopeptide/dipeptide transporter, C-terminal region SAGV88_01055 PF00005 ABC transporter SAGV88_01056 PF08352 Oligopeptide/dipeptide transporter, C-terminal region SAGV88_01056 PF00005 ABC transporter SAGV88_01057 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle SAGV88_01058 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle SAGV88_01059 PF08352 Oligopeptide/dipeptide transporter, C-terminal region SAGV88_01059 PF00005 ABC transporter SAGV88_01060 PF00005 ABC transporter SAGV88_01060 PF08352 Oligopeptide/dipeptide transporter, C-terminal region SAGV88_01061 PF00528 Binding-protein-dependent transport system inner membrane component SAGV88_01062 PF00528 Binding-protein-dependent transport system inner membrane component SAGV88_01062 PF12911 N-terminal TM domain of oligopeptide transport permease C SAGV88_01063 PF00579 tRNA synthetases class I (W and Y) SAGV88_01064 PF03960 ArsC family SAGV88_01065 PF05389 Negative regulator of genetic competence (MecA) SAGV88_01068 PF01432 Peptidase family M3 SAGV88_01068 PF08439 Oligopeptidase F SAGV88_01070 PF01152 Bacterial-like globin SAGV88_01073 PF04607 Region found in RelA / SpoT proteins SAGV88_01074 PF01513 ATP-NAD kinase SAGV88_01075 PF00849 RNA pseudouridylate synthase SAGV88_01076 PF03448 MgtE intracellular N domain SAGV88_01076 PF00571 CBS domain SAGV88_01076 PF01769 Divalent cation transporter SAGV88_01077 PF02254 TrkA-N domain SAGV88_01077 PF02080 TrkA-C domain SAGV88_01077 PF00999 Sodium/hydrogen exchanger family SAGV88_01079 PF01594 AI-2E family transporter SAGV88_01080 PF01235 Sodium:alanine symporter family SAGV88_01083 PF07690 Major Facilitator Superfamily SAGV88_01084 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase SAGV88_01084 PF04101 Glycosyltransferase family 28 C-terminal domain SAGV88_01085 PF01225 Mur ligase family, catalytic domain SAGV88_01085 PF02875 Mur ligase family, glutamate ligase domain SAGV88_01085 PF08245 Mur ligase middle domain SAGV88_01087 PF16658 Class II release factor RF3, C-terminal domain SAGV88_01087 PF00009 Elongation factor Tu GTP binding domain SAGV88_01087 PF03144 Elongation factor Tu domain 2 SAGV88_01088 PF03741 Integral membrane protein TerC family SAGV88_01089 PF13180 PDZ domain SAGV88_01090 PF13180 PDZ domain SAGV88_01091 PF02386 Cation transport protein SAGV88_01092 PF00149 Calcineurin-like phosphoesterase SAGV88_01092 PF02872 5'-nucleotidase, C-terminal domain SAGV88_01093 PF06338 ComK protein SAGV88_01095 PF03099 Biotin/lipoate A/B protein ligase family SAGV88_01095 PF10437 Bacterial lipoate protein ligase C-terminus SAGV88_01096 PF09953 Uncharacterized protein conserved in bacteria (DUF2187) SAGV88_01101 PF02687 FtsX-like permease family SAGV88_01101 PF12704 MacB-like periplasmic core domain SAGV88_01101 PF00005 ABC transporter SAGV88_01105 PF00534 Glycosyl transferases group 1 SAGV88_01107 PF01497 Periplasmic binding protein SAGV88_01109 PF05154 TM2 domain SAGV88_01110 PF00583 Acetyltransferase (GNAT) family SAGV88_01111 PF01040 UbiA prenyltransferase family SAGV88_01112 PF00425 chorismate binding enzyme SAGV88_01113 PF16582 Middle domain of thiamine pyrophosphate SAGV88_01113 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain SAGV88_01113 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain SAGV88_01114 PF00561 alpha/beta hydrolase fold SAGV88_01115 PF00378 Enoyl-CoA hydratase/isomerase SAGV88_01118 PF09023 Staphostatin B SAGV88_01119 PF14731 Staphopain proregion SAGV88_01119 PF05543 Staphopain peptidase C47 SAGV88_01121 PF00155 Aminotransferase class I and II SAGV88_01122 PF01757 Acyltransferase family SAGV88_01125 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase SAGV88_01125 PF13457 GW (Gly-Tryp) dipeptide domain SAGV88_01125 PF01510 N-acetylmuramoyl-L-alanine amidase SAGV88_01127 PF13673 Acetyltransferase (GNAT) domain SAGV88_01128 PF10804 Protein of unknown function (DUF2538) SAGV88_01129 PF03816 Cell envelope-related transcriptional attenuator domain SAGV88_01130 PF00144 Beta-lactamase SAGV88_01131 PF03626 Prokaryotic Cytochrome C oxidase subunit IV SAGV88_01132 PF00510 Cytochrome c oxidase subunit III SAGV88_01133 PF00115 Cytochrome C and Quinol oxidase polypeptide I SAGV88_01134 PF00116 Cytochrome C oxidase subunit II, periplasmic domain SAGV88_01134 PF02790 Cytochrome C oxidase subunit II, transmembrane domain SAGV88_01136 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain SAGV88_01136 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain SAGV88_01137 PF00731 AIR carboxylase SAGV88_01138 PF02222 ATP-grasp domain SAGV88_01138 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain SAGV88_01138 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain SAGV88_01139 PF01259 SAICAR synthetase SAGV88_01140 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase SAGV88_01142 PF02769 AIR synthase related protein, C-terminal domain SAGV88_01142 PF00586 AIR synthase related protein, N-terminal domain SAGV88_01142 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain SAGV88_01143 PF13537 Glutamine amidotransferase domain SAGV88_01143 PF00156 Phosphoribosyl transferase domain SAGV88_01144 PF02769 AIR synthase related protein, C-terminal domain SAGV88_01144 PF00586 AIR synthase related protein, N-terminal domain SAGV88_01145 PF00551 Formyl transferase SAGV88_01146 PF02142 MGS-like domain SAGV88_01146 PF01808 AICARFT/IMPCHase bienzyme SAGV88_01147 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain SAGV88_01147 PF02844 Phosphoribosylglycinamide synthetase, N domain SAGV88_01147 PF02843 Phosphoribosylglycinamide synthetase, C domain SAGV88_01148 PF02361 Cobalt transport protein SAGV88_01149 PF00005 ABC transporter SAGV88_01150 PF09819 ABC-type cobalt transport system, permease component SAGV88_01153 PF10672 S-adenosylmethionine-dependent methyltransferase SAGV88_01153 PF17785 PUA-like domain SAGV88_01156 PF00381 PTS HPr component phosphorylation site SAGV88_01157 PF05524 PEP-utilising enzyme, N-terminal SAGV88_01157 PF00391 PEP-utilising enzyme, mobile domain SAGV88_01157 PF02896 PEP-utilising enzyme, TIM barrel domain SAGV88_01160 PF01654 Cytochrome bd terminal oxidase subunit I SAGV88_01161 PF02322 Cytochrome bd terminal oxidase subunit II SAGV88_01162 PF02254 TrkA-N domain SAGV88_01162 PF02080 TrkA-C domain SAGV88_01164 PF00753 Metallo-beta-lactamase superfamily SAGV88_01164 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain SAGV88_01164 PF17770 Ribonuclease J C-terminal domain SAGV88_01165 PF07288 Protein of unknown function (DUF1447) SAGV88_01166 PF01327 Polypeptide deformylase SAGV88_01168 PF00676 Dehydrogenase E1 component SAGV88_01169 PF02779 Transketolase, pyrimidine binding domain SAGV88_01169 PF02780 Transketolase, C-terminal domain SAGV88_01170 PF00364 Biotin-requiring enzyme SAGV88_01170 PF02817 e3 binding domain SAGV88_01170 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) SAGV88_01171 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain SAGV88_01171 PF07992 Pyridine nucleotide-disulphide oxidoreductase SAGV88_01172 PF05256 Uncharacterised protein family (UPF0223) SAGV88_01175 PF00005 ABC transporter SAGV88_01175 PF08402 TOBE domain SAGV88_01176 PF00528 Binding-protein-dependent transport system inner membrane component SAGV88_01177 PF00528 Binding-protein-dependent transport system inner membrane component SAGV88_01178 PF13416 Bacterial extracellular solute-binding protein SAGV88_01181 PF01566 Natural resistance-associated macrophage protein SAGV88_01183 PF06335 Protein of unknown function (DUF1054) SAGV88_01184 PF00459 Inositol monophosphatase family SAGV88_01186 PF14492 Elongation Factor G, domain II SAGV88_01186 PF03144 Elongation factor Tu domain 2 SAGV88_01186 PF00009 Elongation factor Tu GTP binding domain SAGV88_01186 PF00679 Elongation factor G C-terminus SAGV88_01189 PF07408 Protein of unknown function (DUF1507) SAGV88_01190 PF01098 Cell cycle protein SAGV88_01191 PF02436 Conserved carboxylase domain SAGV88_01191 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain SAGV88_01191 PF00364 Biotin-requiring enzyme SAGV88_01191 PF00682 HMGL-like SAGV88_01191 PF00289 Biotin carboxylase, N-terminal domain SAGV88_01191 PF02785 Biotin carboxylase C-terminal domain SAGV88_01192 PF02628 Cytochrome oxidase assembly protein SAGV88_01193 PF01040 UbiA prenyltransferase family SAGV88_01196 PF06133 Control of competence regulator ComK, YlbF/YmcA SAGV88_01197 PF03009 Glycerophosphoryl diester phosphodiesterase family SAGV88_01198 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) SAGV88_01201 PF01467 Cytidylyltransferase-like SAGV88_01202 PF05636 HIGH Nucleotidyl Transferase SAGV88_01204 PF01783 Ribosomal L32p protein family SAGV88_01205 PF00239 Resolvase, N terminal domain SAGV88_01205 PF02796 Helix-turn-helix domain of resolvase SAGV88_01220 PF00436 Single-strand binding protein family SAGV88_01226 PF01695 IstB-like ATP binding protein SAGV88_01247 PF04466 Phage terminase large subunit SAGV88_01247 PF17288 Terminase RNAseH like domain SAGV88_01268 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase SAGV88_01268 PF13457 GW (Gly-Tryp) dipeptide domain SAGV88_01272 PF01510 N-acetylmuramoyl-L-alanine amidase SAGV88_01272 PF05257 CHAP domain SAGV88_01272 PF08460 Bacterial SH3 domain SAGV88_01273 PF00746 LPXTG cell wall anchor motif SAGV88_01273 PF05031 Iron Transport-associated domain SAGV88_01273 PF04650 YSIRK type signal peptide SAGV88_01274 PF05031 Iron Transport-associated domain SAGV88_01274 PF00746 LPXTG cell wall anchor motif SAGV88_01276 PF05031 Iron Transport-associated domain SAGV88_01279 PF01032 FecCD transport family SAGV88_01280 PF04203 Sortase domain SAGV88_01281 PF03992 Antibiotic biosynthesis monooxygenase SAGV88_01283 PF00588 SpoU rRNA Methylase family SAGV88_01283 PF08032 RNA 2'-O ribose methyltransferase substrate binding SAGV88_01284 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain SAGV88_01284 PF01409 tRNA synthetases class II core domain (F) SAGV88_01285 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain SAGV88_01285 PF01588 Putative tRNA binding domain SAGV88_01285 PF03147 Ferredoxin-fold anticodon binding domain SAGV88_01285 PF03484 tRNA synthetase B5 domain SAGV88_01285 PF03483 B3/4 domain SAGV88_01286 PF01351 Ribonuclease HII SAGV88_01286 PF11858 Domain of unknown function (DUF3378) SAGV88_01287 PF05164 Cell division protein ZapA SAGV88_01289 PF02811 PHP domain SAGV88_01289 PF14716 Helix-hairpin-helix domain SAGV88_01289 PF14791 DNA polymerase beta thumb SAGV88_01292 PF00085 Thioredoxin SAGV88_01294 PF08459 UvrC Helix-hairpin-helix N-terminal SAGV88_01294 PF02151 UvrB/uvrC motif SAGV88_01294 PF01541 GIY-YIG catalytic domain SAGV88_01295 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit SAGV88_01296 PF00890 FAD binding domain SAGV88_01296 PF02910 Fumarate reductase flavoprotein C-term SAGV88_01297 PF13085 2Fe-2S iron-sulfur cluster binding domain SAGV88_01297 PF13183 4Fe-4S dicluster domain SAGV88_01298 PF01177 Asp/Glu/Hydantoin racemase SAGV88_01299 PF01725 Ham1 family SAGV88_01300 PF12850 Calcineurin-like phosphoesterase superfamily domain SAGV88_01303 PF16104 Formyl peptide receptor-like 1 inhibitory protein SAGV88_01306 PF12199 Extracellular fibrinogen binding protein C terminal SAGV88_01312 PF07968 Leukocidin/Hemolysin toxin family SAGV88_01315 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain SAGV88_01316 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain SAGV88_01317 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain SAGV88_01318 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain SAGV88_01318 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain SAGV88_01319 PF00696 Amino acid kinase family SAGV88_01320 PF03606 C4-dicarboxylate anaerobic carrier SAGV88_01325 PF05480 Staphylococcus haemolytic protein SAGV88_01326 PF05480 Staphylococcus haemolytic protein SAGV88_01327 PF13419 Haloacid dehalogenase-like hydrolase SAGV88_01329 PF10079 Bacillithiol biosynthesis BshC SAGV88_01330 PF02381 MraZ protein, putative antitoxin-like SAGV88_01331 PF01795 MraW methylase family SAGV88_01332 PF04977 Septum formation initiator SAGV88_01333 PF03793 PASTA domain SAGV88_01333 PF00905 Penicillin binding protein transpeptidase domain SAGV88_01333 PF03717 Penicillin-binding Protein dimerisation domain SAGV88_01334 PF00953 Glycosyl transferase family 4 SAGV88_01335 PF08245 Mur ligase middle domain SAGV88_01335 PF02875 Mur ligase family, glutamate ligase domain SAGV88_01336 PF03799 Cell division protein FtsQ SAGV88_01336 PF08478 POTRA domain, FtsQ-type SAGV88_01337 PF02491 SHS2 domain inserted in FTSA SAGV88_01338 PF12327 FtsZ family, C-terminal domain SAGV88_01338 PF00091 Tubulin/FtsZ family, GTPase domain SAGV88_01339 PF02578 Multi-copper polyphenol oxidoreductase laccase SAGV88_01340 PF01168 Alanine racemase, N-terminal domain SAGV88_01341 PF04472 Cell division protein SepF SAGV88_01342 PF02325 YGGT family SAGV88_01343 PF17774 Putative RNA-binding domain in YlmH SAGV88_01343 PF01479 S4 domain SAGV88_01344 PF05103 DivIVA protein SAGV88_01345 PF08264 Anticodon-binding domain of tRNA SAGV88_01345 PF00133 tRNA synthetases class I (I, L, M and V) SAGV88_01345 PF06827 Zinc finger found in FPG and IleRS SAGV88_01346 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily SAGV88_01349 PF01252 Signal peptidase (SPase) II SAGV88_01350 PF01479 S4 domain SAGV88_01350 PF00849 RNA pseudouridylate synthase SAGV88_01351 PF00156 Phosphoribosyl transferase domain SAGV88_01352 PF00860 Permease family SAGV88_01353 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain SAGV88_01353 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain SAGV88_01354 PF01979 Amidohydrolase family SAGV88_01355 PF00117 Glutamine amidotransferase class-I SAGV88_01355 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain SAGV88_01356 PF02142 MGS-like domain SAGV88_01356 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain SAGV88_01356 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain SAGV88_01357 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family SAGV88_01358 PF00156 Phosphoribosyl transferase domain SAGV88_01362 PF05670 NFACT protein RNA binding domain SAGV88_01363 PF00625 Guanylate kinase SAGV88_01364 PF01192 RNA polymerase Rpb6 SAGV88_01365 PF02441 Flavoprotein SAGV88_01365 PF04127 DNA / pantothenate metabolism flavoprotein SAGV88_01366 PF04851 Type III restriction enzyme, res subunit SAGV88_01366 PF18319 PriA DNA helicase Cys-rich region (CRR) domain SAGV88_01366 PF18074 Primosomal protein N C-terminal domain SAGV88_01366 PF00271 Helicase conserved C-terminal domain SAGV88_01366 PF17764 3′ DNA-binding domain (3′BD) SAGV88_01369 PF05154 TM2 domain SAGV88_01370 PF01327 Polypeptide deformylase SAGV88_01371 PF00551 Formyl transferase SAGV88_01371 PF02911 Formyl transferase, C-terminal domain SAGV88_01372 PF01189 16S rRNA methyltransferase RsmB/F SAGV88_01372 PF01029 NusB family SAGV88_01373 PF04055 Radical SAM superfamily SAGV88_01375 PF00069 Protein kinase domain SAGV88_01375 PF03793 PASTA domain SAGV88_01376 PF03193 RsgA GTPase SAGV88_01376 PF16745 RsgA N-terminal domain SAGV88_01377 PF00834 Ribulose-phosphate 3 epimerase family SAGV88_01379 PF00830 Ribosomal L28 family SAGV88_01381 PF03780 Asp23 family, cell envelope-related function SAGV88_01382 PF13684 Dihydroxyacetone kinase family SAGV88_01382 PF02734 DAK2 domain SAGV88_01383 PF00271 Helicase conserved C-terminal domain SAGV88_01383 PF00270 DEAD/DEAH box helicase SAGV88_01383 PF17191 RecG wedge domain SAGV88_01384 PF03061 Thioesterase superfamily SAGV88_01385 PF02504 Fatty acid synthesis protein SAGV88_01386 PF00698 Acyl transferase domain SAGV88_01388 PF00550 Phosphopantetheine attachment site SAGV88_01389 PF00035 Double-stranded RNA binding motif SAGV88_01389 PF14622 Ribonuclease-III-like SAGV88_01390 PF02463 RecF/RecN/SMC N terminal domain SAGV88_01390 PF06470 SMC proteins Flexible Hinge Domain SAGV88_01391 PF00448 SRP54-type protein, GTPase domain SAGV88_01391 PF02881 SRP54-type protein, helical bundle domain SAGV88_01392 PF04297 Putative helix-turn-helix protein, YlxM / p13 like SAGV88_01393 PF02978 Signal peptide binding domain SAGV88_01393 PF00448 SRP54-type protein, GTPase domain SAGV88_01393 PF02881 SRP54-type protein, helical bundle domain SAGV88_01395 PF00886 Ribosomal protein S16 SAGV88_01396 PF05239 PRC-barrel domain SAGV88_01396 PF01782 RimM N-terminal domain SAGV88_01397 PF01746 tRNA (Guanine-1)-methyltransferase SAGV88_01398 PF01245 Ribosomal protein L19 SAGV88_01400 PF01926 50S ribosome-binding GTPase SAGV88_01401 PF01351 Ribonuclease HII SAGV88_01402 PF08442 ATP-grasp domain SAGV88_01402 PF00549 CoA-ligase SAGV88_01403 PF00549 CoA-ligase SAGV88_01403 PF02629 CoA binding domain SAGV88_01404 PF01476 LysM domain SAGV88_01404 PF05257 CHAP domain SAGV88_01405 PF02388 FemAB family SAGV88_01406 PF02388 FemAB family SAGV88_01407 PF02481 DNA recombination-mediator protein A SAGV88_01408 PF01751 Toprim domain SAGV88_01408 PF01131 DNA topoisomerase SAGV88_01408 PF01396 Topoisomerase DNA binding C4 zinc finger SAGV88_01409 PF01134 Glucose inhibited division protein A SAGV88_01410 PF02899 Phage integrase, N-terminal SAM-like domain SAGV88_01410 PF00589 Phage integrase family SAGV88_01411 PF00227 Proteasome subunit SAGV88_01412 PF10431 C-terminal, D2-small domain, of ClpB protein SAGV88_01412 PF07724 AAA domain (Cdc48 subfamily) SAGV88_01412 PF00004 ATPase family associated with various cellular activities (AAA) SAGV88_01413 PF06018 CodY GAF-like domain SAGV88_01413 PF08222 CodY helix-turn-helix domain SAGV88_01415 PF00318 Ribosomal protein S2 SAGV88_01416 PF00889 Elongation factor TS SAGV88_01417 PF00696 Amino acid kinase family SAGV88_01418 PF01765 Ribosome recycling factor SAGV88_01419 PF01255 Putative undecaprenyl diphosphate synthase SAGV88_01420 PF01255 Putative undecaprenyl diphosphate synthase SAGV88_01422 PF13180 PDZ domain SAGV88_01422 PF02163 Peptidase family M50 SAGV88_01423 PF03129 Anticodon binding domain SAGV88_01423 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) SAGV88_01423 PF04073 Aminoacyl-tRNA editing domain SAGV88_01424 PF00929 Exonuclease SAGV88_01424 PF14579 Helix-hairpin-helix motif SAGV88_01424 PF17657 Bacterial DNA polymerase III alpha subunit finger domain SAGV88_01424 PF07733 Bacterial DNA polymerase III alpha NTPase domain SAGV88_01424 PF11490 DNA polymerase III polC-type N-terminus II SAGV88_01424 PF14480 DNA polymerase III polC-type N-terminus I SAGV88_01424 PF02811 PHP domain SAGV88_01425 PF02576 RimP N-terminal domain SAGV88_01425 PF17384 RimP C-terminal SH3 domain SAGV88_01426 PF13184 NusA-like KH domain SAGV88_01426 PF08529 NusA N-terminal domain SAGV88_01426 PF00575 S1 RNA binding domain SAGV88_01427 PF04296 Protein of unknown function (DUF448) SAGV88_01428 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family SAGV88_01429 PF04760 Translation initiation factor IF-2, N-terminal region SAGV88_01429 PF11987 Translation-initiation factor 2 SAGV88_01429 PF00009 Elongation factor Tu GTP binding domain SAGV88_01430 PF02033 Ribosome-binding factor A SAGV88_01431 PF16198 tRNA pseudouridylate synthase B C-terminal domain SAGV88_01431 PF01509 TruB family pseudouridylate synthase (N terminal domain) SAGV88_01432 PF06574 FAD synthetase SAGV88_01432 PF01687 Riboflavin kinase SAGV88_01433 PF00312 Ribosomal protein S15 SAGV88_01434 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain SAGV88_01434 PF03725 3' exoribonuclease family, domain 2 SAGV88_01434 PF00013 KH domain SAGV88_01434 PF01138 3' exoribonuclease family, domain 1 SAGV88_01434 PF00575 S1 RNA binding domain SAGV88_01435 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain SAGV88_01435 PF00753 Metallo-beta-lactamase superfamily SAGV88_01435 PF17770 Ribonuclease J C-terminal domain SAGV88_01436 PF01580 FtsK/SpoIIIE family SAGV88_01436 PF17854 FtsK alpha domain SAGV88_01436 PF09397 Ftsk gamma domain SAGV88_01437 PF07702 UTRA domain SAGV88_01437 PF00392 Bacterial regulatory proteins, gntR family SAGV88_01438 PF05193 Peptidase M16 inactive domain SAGV88_01439 PF05193 Peptidase M16 inactive domain SAGV88_01439 PF00675 Insulinase (Peptidase family M16) SAGV88_01441 PF11868 Protein of unknown function (DUF3388) SAGV88_01443 PF01066 CDP-alcohol phosphatidyltransferase SAGV88_01444 PF02464 Competence-damaged protein SAGV88_01444 PF00994 Probable molybdopterin binding domain SAGV88_01444 PF18146 Damage-inducible protein CinA KH domain SAGV88_01445 PF00154 recA bacterial DNA recombination protein SAGV88_01446 PF12072 Domain of unknown function (DUF3552) SAGV88_01446 PF01966 HD domain SAGV88_01446 PF00013 KH domain SAGV88_01448 PF13277 YmdB-like protein SAGV88_01449 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II SAGV88_01449 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase SAGV88_01449 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg SAGV88_01450 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain SAGV88_01451 PF01910 Thiamine-binding protein SAGV88_01452 PF04055 Radical SAM superfamily SAGV88_01452 PF01938 TRAM domain SAGV88_01452 PF00919 Uncharacterized protein family UPF0004 SAGV88_01455 PF01624 MutS domain I SAGV88_01455 PF05188 MutS domain II SAGV88_01455 PF00488 MutS domain V SAGV88_01455 PF05192 MutS domain III SAGV88_01455 PF05190 MutS family domain IV SAGV88_01456 PF01119 DNA mismatch repair protein, C-terminal domain SAGV88_01456 PF08676 MutL C terminal dimerisation domain SAGV88_01457 PF04309 Glycerol-3-phosphate responsive antiterminator SAGV88_01458 PF00230 Major intrinsic protein SAGV88_01459 PF02782 FGGY family of carbohydrate kinases, C-terminal domain SAGV88_01459 PF00370 FGGY family of carbohydrate kinases, N-terminal domain SAGV88_01460 PF01266 FAD dependent oxidoreductase SAGV88_01460 PF16901 C-terminal domain of alpha-glycerophosphate oxidase SAGV88_01463 PF17209 Hfq protein SAGV88_01464 PF00255 Glutathione peroxidase SAGV88_01465 PF16360 GTP-binding GTPase Middle Region SAGV88_01465 PF01926 50S ribosome-binding GTPase SAGV88_01465 PF13167 GTP-binding GTPase N-terminal SAGV88_01466 PF06838 Methionine gamma-lyase SAGV88_01467 PF13411 MerR HTH family regulatory protein SAGV88_01468 PF00120 Glutamine synthetase, catalytic domain SAGV88_01468 PF03951 Glutamine synthetase, beta-Grasp domain SAGV88_01478 PF00872 Transposase, Mutator family SAGV88_01479 PF00872 Transposase, Mutator family SAGV88_01491 PF13091 PLD-like domain SAGV88_01491 PF13396 Phospholipase_D-nuclease N-terminal SAGV88_01494 PF00872 Transposase, Mutator family SAGV88_01497 PF00072 Response regulator receiver domain SAGV88_01497 PF00196 Bacterial regulatory proteins, luxR family SAGV88_01499 PF00565 Staphylococcal nuclease homologue SAGV88_01502 PF13840 ACT domain SAGV88_01502 PF00696 Amino acid kinase family SAGV88_01503 PF01842 ACT domain SAGV88_01503 PF03447 Homoserine dehydrogenase, NAD binding domain SAGV88_01503 PF00742 Homoserine dehydrogenase SAGV88_01504 PF00291 Pyridoxal-phosphate dependent enzyme SAGV88_01505 PF08544 GHMP kinases C terminal SAGV88_01505 PF00288 GHMP kinases N terminal domain SAGV88_01508 PF00324 Amino acid permease SAGV88_01509 PF06628 Catalase-related immune-responsive SAGV88_01509 PF00199 Catalase SAGV88_01510 PF00471 Ribosomal protein L33 SAGV88_01513 PF00253 Ribosomal protein S14p/S29e SAGV88_01514 PF00478 IMP dehydrogenase / GMP reductase domain SAGV88_01516 PF00188 Cysteine-rich secretory protein family SAGV88_01518 PF01726 LexA DNA binding domain SAGV88_01518 PF00717 Peptidase S24-like SAGV88_01520 PF05979 Bacterial protein of unknown function (DUF896) SAGV88_01521 PF00456 Transketolase, thiamine diphosphate binding domain SAGV88_01521 PF02779 Transketolase, pyrimidine binding domain SAGV88_01521 PF02780 Transketolase, C-terminal domain SAGV88_01522 PF03672 Uncharacterised protein family (UPF0154) SAGV88_01524 PF07301 Protein of unknown function (DUF1453) SAGV88_01525 PF00149 Calcineurin-like phosphoesterase SAGV88_01525 PF12320 Type 5 capsule protein repressor C-terminal domain SAGV88_01526 PF13476 AAA domain SAGV88_01527 PF01741 Large-conductance mechanosensitive channel, MscL SAGV88_01528 PF02028 BCCT, betaine/carnitine/choline family transporter SAGV88_01530 PF00694 Aconitase C-terminal domain SAGV88_01530 PF00330 Aconitase family (aconitate hydratase) SAGV88_01531 PF03061 Thioesterase superfamily SAGV88_01533 PF02660 Glycerol-3-phosphate acyltransferase SAGV88_01534 PF00986 DNA gyrase B subunit, carboxyl terminus SAGV88_01534 PF00204 DNA gyrase B SAGV88_01534 PF01751 Toprim domain SAGV88_01534 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SAGV88_01535 PF00521 DNA gyrase/topoisomerase IV, subunit A SAGV88_01535 PF03989 DNA gyrase C-terminal domain, beta-propeller SAGV88_01537 PF01235 Sodium:alanine symporter family SAGV88_01538 PF00874 PRD domain SAGV88_01538 PF03123 CAT RNA binding domain SAGV88_01540 PF01594 AI-2E family transporter SAGV88_01541 PF09924 Uncharacterised conserved protein (DUF2156) SAGV88_01541 PF03706 Lysylphosphatidylglycerol synthase TM region SAGV88_01542 PF01625 Peptide methionine sulfoxide reductase SAGV88_01543 PF03816 Cell envelope-related transcriptional attenuator domain SAGV88_01544 PF01361 Tautomerase enzyme SAGV88_01545 PF11798 IMS family HHH motif SAGV88_01545 PF11799 impB/mucB/samB family C-terminal domain SAGV88_01545 PF00817 impB/mucB/samB family SAGV88_01546 PF02153 Prephenate dehydrogenase SAGV88_01547 PF05343 M42 glutamyl aminopeptidase SAGV88_01548 PF04715 Anthranilate synthase component I, N terminal region SAGV88_01548 PF00425 chorismate binding enzyme SAGV88_01549 PF00117 Glutamine amidotransferase class-I SAGV88_01550 PF00591 Glycosyl transferase family, a/b domain SAGV88_01551 PF00218 Indole-3-glycerol phosphate synthase SAGV88_01552 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase SAGV88_01553 PF00291 Pyridoxal-phosphate dependent enzyme SAGV88_01554 PF00290 Tryptophan synthase alpha chain SAGV88_01555 PF02388 FemAB family SAGV88_01556 PF02388 FemAB family SAGV88_01561 PF00005 ABC transporter SAGV88_01562 PF00005 ABC transporter SAGV88_01563 PF00528 Binding-protein-dependent transport system inner membrane component SAGV88_01564 PF00528 Binding-protein-dependent transport system inner membrane component SAGV88_01566 PF08439 Oligopeptidase F SAGV88_01566 PF01432 Peptidase family M3 SAGV88_01567 PF01895 PhoU domain SAGV88_01568 PF00005 ABC transporter SAGV88_01569 PF00528 Binding-protein-dependent transport system inner membrane component SAGV88_01570 PF00528 Binding-protein-dependent transport system inner membrane component SAGV88_01571 PF12849 PBP superfamily domain SAGV88_01575 PF13509 S1 domain SAGV88_01575 PF17783 CvfB-like winged helix domain SAGV88_01576 PF12848 ABC transporter SAGV88_01576 PF00005 ABC transporter SAGV88_01579 PF13840 ACT domain SAGV88_01579 PF01842 ACT domain SAGV88_01579 PF00696 Amino acid kinase family SAGV88_01580 PF02774 Semialdehyde dehydrogenase, dimerisation domain SAGV88_01580 PF01118 Semialdehyde dehydrogenase, NAD binding domain SAGV88_01581 PF00701 Dihydrodipicolinate synthetase family SAGV88_01582 PF05173 Dihydrodipicolinate reductase, C-terminus SAGV88_01582 PF01113 Dihydrodipicolinate reductase, N-terminus SAGV88_01583 PF14602 Hexapeptide repeat of succinyl-transferase SAGV88_01583 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal SAGV88_01583 PF00132 Bacterial transferase hexapeptide (six repeats) SAGV88_01584 PF07687 Peptidase dimerisation domain SAGV88_01584 PF01546 Peptidase family M20/M25/M40 SAGV88_01585 PF00842 Alanine racemase, C-terminal domain SAGV88_01585 PF01168 Alanine racemase, N-terminal domain SAGV88_01586 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain SAGV88_01586 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain SAGV88_01588 PF00313 'Cold-shock' DNA-binding domain SAGV88_01590 PF00708 Acylphosphatase SAGV88_01592 PF05816 Toxic anion resistance protein (TelA) SAGV88_01598 PF05525 Branched-chain amino acid transport protein SAGV88_01599 PF00092 von Willebrand factor type A domain SAGV88_01600 PF07728 AAA domain (dynein-related subfamily) SAGV88_01600 PF08406 CbbQ/NirQ/NorQ C-terminal SAGV88_01603 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) SAGV88_01603 PF00364 Biotin-requiring enzyme SAGV88_01603 PF02817 e3 binding domain SAGV88_01604 PF00676 Dehydrogenase E1 component SAGV88_01604 PF16870 2-oxoglutarate dehydrogenase C-terminal SAGV88_01604 PF02779 Transketolase, pyrimidine binding domain SAGV88_01605 PF00512 His Kinase A (phospho-acceptor) domain SAGV88_01605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SAGV88_01605 PF18719 ArlS sensor domain SAGV88_01606 PF00072 Response regulator receiver domain SAGV88_01606 PF00486 Transcriptional regulatory protein, C terminal SAGV88_01608 PF01797 Transposase IS200 like SAGV88_01609 PF01569 PAP2 superfamily SAGV88_01610 PF03033 Glycosyltransferase family 28 N-terminal domain SAGV88_01610 PF04101 Glycosyltransferase family 28 C-terminal domain SAGV88_01612 PF01471 Putative peptidoglycan binding domain SAGV88_01612 PF03572 Peptidase family S41 SAGV88_01612 PF13180 PDZ domain SAGV88_01613 PF06855 YozE SAM-like fold SAGV88_01614 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 SAGV88_01615 PF01641 SelR domain SAGV88_01616 PF01625 Peptide methionine sulfoxide reductase SAGV88_01617 PF02645 Uncharacterised protein, DegV family COG1307 SAGV88_01618 PF00186 Dihydrofolate reductase SAGV88_01619 PF00303 Thymidylate synthase SAGV88_01620 PF06491 Disulphide isomerase SAGV88_01621 PF13769 Virulence factor SAGV88_01621 PF08712 Scaffold protein Nfu/NifU N terminal SAGV88_01622 PF13769 Virulence factor SAGV88_01622 PF08712 Scaffold protein Nfu/NifU N terminal SAGV88_01623 PF10782 Zinc-finger SAGV88_01625 PF02592 Putative vitamin uptake transporter SAGV88_01630 PF07690 Major Facilitator Superfamily SAGV88_01631 PF13520 Amino acid permease SAGV88_01632 PF00291 Pyridoxal-phosphate dependent enzyme SAGV88_01633 PF05222 Alanine dehydrogenase/PNT, N-terminal domain SAGV88_01633 PF01262 Alanine dehydrogenase/PNT, C-terminal domain SAGV88_01634 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain SAGV88_01634 PF01367 5'-3' exonuclease, C-terminal SAM fold SAGV88_01635 PF00350 Dynamin family SAGV88_01638 PF01170 Putative RNA methylase family UPF0020 SAGV88_01638 PF02926 THUMP domain SAGV88_01640 PF05103 DivIVA protein SAGV88_01641 PF06908 YspA SLOG family SAGV88_01643 PF03838 Recombination protein U SAGV88_01644 PF00905 Penicillin binding protein transpeptidase domain SAGV88_01644 PF00912 Transglycosylase SAGV88_01646 PF00633 Helix-hairpin-helix motif SAGV88_01646 PF10576 Iron-sulfur binding domain of endonuclease III SAGV88_01646 PF00730 HhH-GPD superfamily base excision DNA repair protein SAGV88_01647 PF07261 Replication initiation and membrane attachment SAGV88_01648 PF01336 OB-fold nucleic acid binding domain SAGV88_01648 PF00152 tRNA synthetases class II (D, K and N) SAGV88_01649 PF13307 Helicase C-terminal domain SAGV88_01649 PF00929 Exonuclease SAGV88_01650 PF03099 Biotin/lipoate A/B protein ligase family SAGV88_01650 PF02237 Biotin protein ligase C terminal domain SAGV88_01650 PF08279 HTH domain SAGV88_01651 PF01743 Poly A polymerase head domain SAGV88_01651 PF13735 tRNA nucleotidyltransferase domain 2 putative SAGV88_01651 PF12627 Probable RNA and SrmB- binding site of polymerase A SAGV88_01652 PF13439 Glycosyltransferase Family 4 SAGV88_01652 PF00534 Glycosyl transferases group 1 SAGV88_01653 PF03819 MazG nucleotide pyrophosphohydrolase domain SAGV88_01654 PF04298 Putative neutral zinc metallopeptidase SAGV88_01655 PF07187 Protein of unknown function (DUF1405) SAGV88_01656 PF08864 UPF0302 domain SAGV88_01656 PF08858 IDEAL domain SAGV88_01658 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) SAGV88_01659 PF01761 3-dehydroquinate synthase SAGV88_01660 PF01264 Chorismate synthase SAGV88_01661 PF00334 Nucleoside diphosphate kinase SAGV88_01662 PF00348 Polyprenyl synthetase SAGV88_01663 PF01209 ubiE/COQ5 methyltransferase family SAGV88_01666 PF00216 Bacterial DNA-binding protein SAGV88_01668 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus SAGV88_01668 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus SAGV88_01669 PF01926 50S ribosome-binding GTPase SAGV88_01669 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal SAGV88_01670 PF00575 S1 RNA binding domain SAGV88_01672 PF02224 Cytidylate kinase SAGV88_01673 PF00710 Asparaginase, N-terminal SAGV88_01673 PF17763 Glutaminase/Asparaginase C-terminal domain SAGV88_01676 PF01476 LysM domain SAGV88_01677 PF00270 DEAD/DEAH box helicase SAGV88_01677 PF00271 Helicase conserved C-terminal domain SAGV88_01680 PF12822 ECF transporter, substrate-specific component SAGV88_01688 PF05257 CHAP domain SAGV88_01688 PF01520 N-acetylmuramoyl-L-alanine amidase SAGV88_01688 PF08460 Bacterial SH3 domain SAGV88_01698 PF01464 Transglycosylase SLT domain SAGV88_01724 PF00692 dUTPase SAGV88_01744 PF03374 Phage antirepressor protein KilAC domain SAGV88_01744 PF09669 Phage regulatory protein Rha (Phage_pRha) SAGV88_01751 PF14659 Phage integrase, N-terminal SAM-like domain SAGV88_01751 PF00589 Phage integrase family SAGV88_01754 PF18698 Histidine kinase sensor domain SAGV88_01754 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SAGV88_01754 PF00672 HAMP domain SAGV88_01754 PF00512 His Kinase A (phospho-acceptor) domain SAGV88_01755 PF00486 Transcriptional regulatory protein, C terminal SAGV88_01755 PF00072 Response regulator receiver domain SAGV88_01756 PF00849 RNA pseudouridylate synthase SAGV88_01756 PF01479 S4 domain SAGV88_01757 PF04079 Segregation and condensation complex subunit ScpB SAGV88_01758 PF02616 Segregation and condensation protein ScpA SAGV88_01760 PF02899 Phage integrase, N-terminal SAM-like domain SAGV88_01760 PF00589 Phage integrase family SAGV88_01761 PF01475 Ferric uptake regulator family SAGV88_01762 PF00293 NUDIX domain SAGV88_01763 PF00248 Aldo/keto reductase family SAGV88_01765 PF00106 short chain dehydrogenase SAGV88_01766 PF14748 Pyrroline-5-carboxylate reductase dimerisation SAGV88_01766 PF03807 NADP oxidoreductase coenzyme F420-dependent SAGV88_01767 PF12706 Beta-lactamase superfamily domain SAGV88_01769 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain SAGV88_01769 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain SAGV88_01772 PF16657 Maltogenic Amylase, C-terminal domain SAGV88_01772 PF00128 Alpha amylase, catalytic domain SAGV88_01773 PF00356 Bacterial regulatory proteins, lacI family SAGV88_01775 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain SAGV88_01775 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase SAGV88_01776 PF07687 Peptidase dimerisation domain SAGV88_01776 PF01546 Peptidase family M20/M25/M40 SAGV88_01778 PF11728 Putative aromatic acid exporter C-terminal domain SAGV88_01778 PF06081 Aromatic acid exporter family member 1 SAGV88_01779 PF06491 Disulphide isomerase SAGV88_01780 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) SAGV88_01780 PF00364 Biotin-requiring enzyme SAGV88_01780 PF02817 e3 binding domain SAGV88_01781 PF02780 Transketolase, C-terminal domain SAGV88_01781 PF02779 Transketolase, pyrimidine binding domain SAGV88_01782 PF00676 Dehydrogenase E1 component SAGV88_01783 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain SAGV88_01783 PF07992 Pyridine nucleotide-disulphide oxidoreductase SAGV88_01784 PF13476 AAA domain SAGV88_01785 PF01316 Arginine repressor, DNA binding domain SAGV88_01785 PF02863 Arginine repressor, C-terminal domain SAGV88_01786 PF00348 Polyprenyl synthetase SAGV88_01787 PF02609 Exonuclease VII small subunit SAGV88_01788 PF02601 Exonuclease VII, large subunit SAGV88_01788 PF13742 OB-fold nucleic acid binding domain SAGV88_01789 PF01029 NusB family SAGV88_01790 PF03780 Asp23 family, cell envelope-related function SAGV88_01791 PF00289 Biotin carboxylase, N-terminal domain SAGV88_01791 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain SAGV88_01791 PF02785 Biotin carboxylase C-terminal domain SAGV88_01792 PF00364 Biotin-requiring enzyme SAGV88_01793 PF01132 Elongation factor P (EF-P) OB domain SAGV88_01793 PF08207 Elongation factor P (EF-P) KOW-like domain SAGV88_01793 PF09285 Elongation factor P, C-terminal SAGV88_01794 PF01321 Creatinase/Prolidase N-terminal domain SAGV88_01794 PF00557 Metallopeptidase family M24 SAGV88_01797 PF03099 Biotin/lipoate A/B protein ligase family SAGV88_01798 PF00581 Rhodanese-like domain SAGV88_01800 PF00266 Aminotransferase class-V SAGV88_01801 PF02347 Glycine cleavage system P-protein SAGV88_01802 PF08669 Glycine cleavage T-protein C-terminal barrel domain SAGV88_01802 PF01571 Aminomethyltransferase folate-binding domain SAGV88_01803 PF01202 Shikimate kinase SAGV88_01807 PF07963 Prokaryotic N-terminal methylation motif SAGV88_01808 PF00482 Type II secretion system (T2SS), protein F SAGV88_01809 PF00437 Type II/IV secretion system protein SAGV88_01810 PF00753 Metallo-beta-lactamase superfamily SAGV88_01811 PF01910 Thiamine-binding protein SAGV88_01812 PF00480 ROK family SAGV88_01814 PF01812 5-formyltetrahydrofolate cyclo-ligase family SAGV88_01815 PF00471 Ribosomal protein L33 SAGV88_01816 PF00905 Penicillin binding protein transpeptidase domain SAGV88_01816 PF03717 Penicillin-binding Protein dimerisation domain SAGV88_01817 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain SAGV88_01817 PF02777 Iron/manganese superoxide dismutases, C-terminal domain SAGV88_01818 PF01475 Ferric uptake regulator family SAGV88_01819 PF00950 ABC 3 transport family SAGV88_01820 PF00005 ABC transporter SAGV88_01821 PF01261 Xylose isomerase-like TIM barrel SAGV88_01822 PF00270 DEAD/DEAH box helicase SAGV88_01822 PF00271 Helicase conserved C-terminal domain SAGV88_01823 PF01784 NIF3 (NGG1p interacting factor 3) SAGV88_01824 PF04816 tRNA (adenine(22)-N(1))-methyltransferase SAGV88_01825 PF03979 Sigma-70 factor, region 1.1 SAGV88_01825 PF04539 Sigma-70 region 3 SAGV88_01825 PF04545 Sigma-70, region 4 SAGV88_01825 PF00140 Sigma-70 factor, region 1.2 SAGV88_01825 PF04542 Sigma-70 region 2 SAGV88_01826 PF01807 CHC2 zinc finger SAGV88_01826 PF08275 DNA primase catalytic core, N-terminal domain SAGV88_01826 PF00772 DnaB-like helicase N terminal domain SAGV88_01827 PF03618 Kinase/pyrophosphorylase SAGV88_01828 PF00571 CBS domain SAGV88_01828 PF08279 HTH domain SAGV88_01829 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) SAGV88_01829 PF03129 Anticodon binding domain SAGV88_01830 PF02565 Recombination protein O C terminal SAGV88_01830 PF11967 Recombination protein O N terminal SAGV88_01831 PF07650 KH domain SAGV88_01831 PF01926 50S ribosome-binding GTPase SAGV88_01832 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region SAGV88_01834 PF02130 Uncharacterized protein family UPF0054 SAGV88_01835 PF02562 PhoH-like protein SAGV88_01838 PF12127 SigmaW regulon antibacterial SAGV88_01839 PF01957 NfeD-like C-terminal, partner-binding SAGV88_01839 PF01972 Serine dehydrogenase proteinase SAGV88_01840 PF01165 Ribosomal protein S21 SAGV88_01841 PF01938 TRAM domain SAGV88_01841 PF04055 Radical SAM superfamily SAGV88_01841 PF00919 Uncharacterized protein family UPF0004 SAGV88_01842 PF04452 RNA methyltransferase SAGV88_01844 PF00226 DnaJ domain SAGV88_01844 PF00684 DnaJ central domain SAGV88_01844 PF01556 DnaJ C terminal domain SAGV88_01845 PF00012 Hsp70 protein SAGV88_01846 PF01025 GrpE SAGV88_01847 PF01628 HrcA protein C terminal domain SAGV88_01848 PF04055 Radical SAM superfamily SAGV88_01848 PF06969 HemN C-terminal domain SAGV88_01849 PF00679 Elongation factor G C-terminus SAGV88_01849 PF00009 Elongation factor Tu GTP binding domain SAGV88_01849 PF03144 Elongation factor Tu domain 2 SAGV88_01849 PF06421 GTP-binding protein LepA C-terminus SAGV88_01850 PF01649 Ribosomal protein S20 SAGV88_01851 PF06144 DNA polymerase III, delta subunit SAGV88_01852 PF13567 Domain of unknown function (DUF4131) SAGV88_01852 PF03772 Competence protein SAGV88_01852 PF00753 Metallo-beta-lactamase superfamily SAGV88_01853 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region SAGV88_01856 PF13649 Methyltransferase domain SAGV88_01858 PF01966 HD domain SAGV88_01859 PF01467 Cytidylyltransferase-like SAGV88_01860 PF01985 CRS1 / YhbY (CRM) domain SAGV88_01861 PF08501 Shikimate dehydrogenase substrate binding domain SAGV88_01861 PF18317 Shikimate 5'-dehydrogenase C-terminal domain SAGV88_01861 PF01488 Shikimate / quinate 5-dehydrogenase SAGV88_01862 PF01926 50S ribosome-binding GTPase SAGV88_01864 PF01048 Phosphorylase superfamily SAGV88_01867 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain SAGV88_01868 PF02661 Fic/DOC family SAGV88_01868 PF12728 Helix-turn-helix domain SAGV88_01869 PF01566 Natural resistance-associated macrophage protein SAGV88_01870 PF03746 LamB/YcsF family SAGV88_01871 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain SAGV88_01871 PF00289 Biotin carboxylase, N-terminal domain SAGV88_01871 PF02785 Biotin carboxylase C-terminal domain SAGV88_01872 PF00364 Biotin-requiring enzyme SAGV88_01873 PF02626 Carboxyltransferase domain, subdomain A and B SAGV88_01874 PF02682 Carboxyltransferase domain, subdomain C and D SAGV88_01875 PF01272 Transcription elongation factor, GreA/GreB, C-term SAGV88_01875 PF03449 Transcription elongation factor, N-terminal SAGV88_01876 PF00485 Phosphoribulokinase / Uridine kinase family SAGV88_01877 PF16325 Peptidase family U32 C-terminal domain SAGV88_01877 PF01136 Peptidase family U32 SAGV88_01878 PF01136 Peptidase family U32 SAGV88_01880 PF06949 Protein of unknown function (DUF1292) SAGV88_01881 PF03652 Holliday junction resolvase SAGV88_01882 PF06135 IreB regulatory phosphoprotein SAGV88_01883 PF02272 DHHA1 domain SAGV88_01883 PF01411 tRNA synthetases class II (A) SAGV88_01883 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain SAGV88_01884 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain SAGV88_01884 PF14490 Helix-hairpin-helix containing domain SAGV88_01884 PF13538 UvrD-like helicase C-terminal domain SAGV88_01888 PF00266 Aminotransferase class-V SAGV88_01889 PF00296 Luciferase-like monooxygenase SAGV88_01892 PF05532 CsbD-like SAGV88_01893 PF02082 Transcriptional regulator SAGV88_01894 PF12002 MgsA AAA+ ATPase C terminal SAGV88_01894 PF16193 AAA C-terminal domain SAGV88_01894 PF05496 Holliday junction DNA helicase RuvB P-loop domain SAGV88_01895 PF00899 ThiF family SAGV88_01896 PF02938 GAD domain SAGV88_01896 PF01336 OB-fold nucleic acid binding domain SAGV88_01896 PF00152 tRNA synthetases class II (D, K and N) SAGV88_01897 PF03129 Anticodon binding domain SAGV88_01897 PF13393 Histidyl-tRNA synthetase SAGV88_01898 PF08239 Bacterial SH3 domain SAGV88_01898 PF01520 N-acetylmuramoyl-L-alanine amidase SAGV88_01899 PF02580 D-Tyr-tRNA(Tyr) deacylase SAGV88_01900 PF02824 TGS domain SAGV88_01900 PF04607 Region found in RelA / SpoT proteins SAGV88_01900 PF13291 ACT domain SAGV88_01901 PF01797 Transposase IS200 like SAGV88_01903 PF00156 Phosphoribosyl transferase domain SAGV88_01904 PF17768 RecJ OB domain SAGV88_01904 PF01368 DHH family SAGV88_01904 PF10141 Single-strand DNA-specific exonuclease, C terminal domain SAGV88_01904 PF02272 DHHA1 domain SAGV88_01905 PF07549 SecD/SecF GG Motif SAGV88_01905 PF02355 Protein export membrane protein SAGV88_01907 PF02699 Preprotein translocase subunit SAGV88_01908 PF01702 Queuine tRNA-ribosyltransferase SAGV88_01909 PF02547 Queuosine biosynthesis protein SAGV88_01910 PF17864 RuvB AAA lid domain SAGV88_01910 PF05496 Holliday junction DNA helicase RuvB P-loop domain SAGV88_01910 PF05491 RuvB C-terminal winged helix domain SAGV88_01911 PF07499 RuvA, C-terminal domain SAGV88_01911 PF01330 RuvA N terminal domain SAGV88_01913 PF01018 GTP1/OBG SAGV88_01913 PF01926 50S ribosome-binding GTPase SAGV88_01913 PF09269 Domain of unknown function (DUF1967) SAGV88_01915 PF01016 Ribosomal L27 protein SAGV88_01916 PF04327 Cysteine protease Prp SAGV88_01917 PF00829 Ribosomal prokaryotic L21 protein SAGV88_01925 PF00398 Ribosomal RNA adenine dimethylase SAGV88_01927 PF13427 Domain of unknown function (DUF4111) SAGV88_01927 PF01909 Nucleotidyltransferase domain SAGV88_01929 PF00589 Phage integrase family SAGV88_01930 PF02899 Phage integrase, N-terminal SAM-like domain SAGV88_01930 PF00589 Phage integrase family SAGV88_01931 PF04002 RadC-like JAB domain SAGV88_01932 PF06750 Bacterial Peptidase A24 N-terminal domain SAGV88_01932 PF01478 Type IV leader peptidase family SAGV88_01934 PF02875 Mur ligase family, glutamate ligase domain SAGV88_01934 PF08245 Mur ligase middle domain SAGV88_01935 PF10458 Valyl tRNA synthetase tRNA binding arm SAGV88_01935 PF08264 Anticodon-binding domain of tRNA SAGV88_01935 PF00133 tRNA synthetases class I (I, L, M and V) SAGV88_01937 PF03352 Methyladenine glycosylase SAGV88_01940 PF00202 Aminotransferase class-III SAGV88_01941 PF00490 Delta-aminolevulinic acid dehydratase SAGV88_01943 PF03900 Porphobilinogen deaminase, C-terminal domain SAGV88_01943 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain SAGV88_01944 PF01578 Cytochrome C assembly protein SAGV88_01945 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain SAGV88_01945 PF01488 Shikimate / quinate 5-dehydrogenase SAGV88_01945 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain SAGV88_01946 PF01926 50S ribosome-binding GTPase SAGV88_01947 PF06689 ClpX C4-type zinc finger SAGV88_01947 PF10431 C-terminal, D2-small domain, of ClpB protein SAGV88_01947 PF07724 AAA domain (Cdc48 subfamily) SAGV88_01948 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase SAGV88_01948 PF05698 Bacterial trigger factor protein (TF) C-terminus SAGV88_01948 PF05697 Bacterial trigger factor protein (TF) SAGV88_01951 PF00453 Ribosomal protein L20 SAGV88_01952 PF01632 Ribosomal protein L35 SAGV88_01953 PF00707 Translation initiation factor IF-3, C-terminal domain SAGV88_01953 PF05198 Translation initiation factor IF-3, N-terminal domain SAGV88_01954 PF00324 Amino acid permease SAGV88_01955 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain SAGV88_01955 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) SAGV88_01955 PF02824 TGS domain SAGV88_01955 PF03129 Anticodon binding domain SAGV88_01956 PF01695 IstB-like ATP binding protein SAGV88_01956 PF07319 Primosomal protein DnaI N-terminus SAGV88_01958 PF03477 ATP cone domain SAGV88_01959 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain SAGV88_01959 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain SAGV88_01960 PF01121 Dephospho-CoA kinase SAGV88_01961 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain SAGV88_01961 PF06827 Zinc finger found in FPG and IleRS SAGV88_01961 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain SAGV88_01962 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain SAGV88_01962 PF00476 DNA polymerase family A SAGV88_01962 PF01367 5'-3' exonuclease, C-terminal SAM fold SAGV88_01964 PF16736 Single Cache-like SAGV88_01964 PF00512 His Kinase A (phospho-acceptor) domain SAGV88_01964 PF00989 PAS fold SAGV88_01964 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SAGV88_01965 PF00486 Transcriptional regulatory protein, C terminal SAGV88_01965 PF00072 Response regulator receiver domain SAGV88_01967 PF00180 Isocitrate/isopropylmalate dehydrogenase SAGV88_01968 PF00285 Citrate synthase, C-terminal domain SAGV88_01969 PF00324 Amino acid permease SAGV88_01973 PF02887 Pyruvate kinase, alpha/beta domain SAGV88_01973 PF00224 Pyruvate kinase, barrel domain SAGV88_01973 PF00391 PEP-utilising enzyme, mobile domain SAGV88_01974 PF00365 Phosphofructokinase SAGV88_01975 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit SAGV88_01976 PF17848 Acetyl-coA carboxylase zinc finger domain SAGV88_01976 PF01039 Carboxyl transferase domain SAGV88_01977 PF03949 Malic enzyme, NAD binding domain SAGV88_01977 PF00390 Malic enzyme, N-terminal domain SAGV88_01978 PF02811 PHP domain SAGV88_01978 PF07733 Bacterial DNA polymerase III alpha NTPase domain SAGV88_01978 PF01336 OB-fold nucleic acid binding domain SAGV88_01978 PF17657 Bacterial DNA polymerase III alpha subunit finger domain SAGV88_01978 PF14579 Helix-hairpin-helix motif SAGV88_01979 PF02272 DHHA1 domain SAGV88_01979 PF01368 DHH family SAGV88_01980 PF00392 Bacterial regulatory proteins, gntR family SAGV88_01980 PF00571 CBS domain SAGV88_01980 PF03061 Thioesterase superfamily SAGV88_01980 PF07085 DRTGG domain SAGV88_01984 PF00557 Metallopeptidase family M24 SAGV88_01984 PF01321 Creatinase/Prolidase N-terminal domain SAGV88_01986 PF05222 Alanine dehydrogenase/PNT, N-terminal domain SAGV88_01986 PF01262 Alanine dehydrogenase/PNT, C-terminal domain SAGV88_01987 PF00582 Universal stress protein family SAGV88_01988 PF00871 Acetokinase family SAGV88_01989 PF02384 N-6 DNA Methylase SAGV88_01990 PF08534 Redoxin SAGV88_01991 PF01925 Sulfite exporter TauE/SafE SAGV88_01992 PF02568 Thiamine biosynthesis protein (ThiI) SAGV88_01992 PF02926 THUMP domain SAGV88_01993 PF00266 Aminotransferase class-V SAGV88_01995 PF06160 Septation ring formation regulator, EzrA SAGV88_01996 PF13185 GAF domain SAGV88_01997 PF01479 S4 domain SAGV88_01997 PF00163 Ribosomal protein S4/S9 N-terminal domain SAGV88_01998 PF03009 Glycerophosphoryl diester phosphodiesterase family SAGV88_01999 PF02566 OsmC-like protein SAGV88_02000 PF00266 Aminotransferase class-V SAGV88_02001 PF01842 ACT domain SAGV88_02001 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain SAGV88_02001 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain SAGV88_02004 PF02378 Phosphotransferase system, EIIC SAGV88_02004 PF00367 phosphotransferase system, EIIB SAGV88_02005 PF01553 Acyltransferase SAGV88_02006 PF13180 PDZ domain SAGV88_02007 PF00579 tRNA synthetases class I (W and Y) SAGV88_02007 PF01479 S4 domain SAGV88_02008 PF00912 Transglycosylase SAGV88_02008 PF00905 Penicillin binding protein transpeptidase domain SAGV88_02009 PF05031 Iron Transport-associated domain SAGV88_02009 PF04650 YSIRK type signal peptide SAGV88_02011 PF01268 Formate--tetrahydrofolate ligase SAGV88_02012 PF00501 AMP-binding enzyme SAGV88_02012 PF13193 AMP-binding enzyme C-terminal domain SAGV88_02013 PF00583 Acetyltransferase (GNAT) family SAGV88_02014 PF00850 Histone deacetylase domain SAGV88_02017 PF01817 Chorismate mutase type II SAGV88_02017 PF00793 DAHP synthetase I family SAGV88_02020 PF06103 Bacterial protein of unknown function (DUF948) SAGV88_02021 PF01225 Mur ligase family, catalytic domain SAGV88_02021 PF02875 Mur ligase family, glutamate ligase domain SAGV88_02021 PF08245 Mur ligase middle domain SAGV88_02022 PF17854 FtsK alpha domain SAGV88_02022 PF09397 Ftsk gamma domain SAGV88_02022 PF01580 FtsK/SpoIIIE family SAGV88_02023 PF01588 Putative tRNA binding domain SAGV88_02023 PF14794 Domain of unknown function (DUF4479) SAGV88_02024 PF07285 Protein of unknown function (DUF1444) SAGV88_02025 PF00085 Thioredoxin SAGV88_02026 PF05343 M42 glutamyl aminopeptidase SAGV88_02028 PF00753 Metallo-beta-lactamase superfamily SAGV88_02030 PF02390 Putative methyltransferase SAGV88_02031 PF01636 Phosphotransferase enzyme family SAGV88_02032 PF01063 Amino-transferase class IV SAGV88_02033 PF01546 Peptidase family M20/M25/M40 SAGV88_02035 PF01479 S4 domain SAGV88_02035 PF00849 RNA pseudouridylate synthase SAGV88_02036 PF01943 Polysaccharide biosynthesis protein SAGV88_02036 PF14667 Polysaccharide biosynthesis C-terminal domain SAGV88_02038 PF04650 YSIRK type signal peptide SAGV88_02038 PF01468 GA module SAGV88_02038 PF07564 Domain of Unknown Function (DUF1542) SAGV88_02040 PF00133 tRNA synthetases class I (I, L, M and V) SAGV88_02040 PF08264 Anticodon-binding domain of tRNA SAGV88_02040 PF09334 tRNA synthetases class I (M) SAGV88_02040 PF13603 Leucyl-tRNA synthetase, Domain 2 SAGV88_02041 PF07690 Major Facilitator Superfamily SAGV88_02043 PF04055 Radical SAM superfamily SAGV88_02043 PF16199 Radical_SAM C-terminal domain SAGV88_02044 PF06962 Putative rRNA methylase SAGV88_02045 PF01047 MarR family SAGV88_02051 PF12146 Serine aminopeptidase, S33 SAGV88_02052 PF01619 Proline dehydrogenase SAGV88_02053 PF00885 6,7-dimethyl-8-ribityllumazine synthase SAGV88_02054 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase SAGV88_02054 PF00925 GTP cyclohydrolase II SAGV88_02055 PF00677 Lumazine binding domain SAGV88_02056 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region SAGV88_02056 PF01872 RibD C-terminal domain SAGV88_02058 PF02040 Arsenical pump membrane protein SAGV88_02059 PF01451 Low molecular weight phosphotyrosine protein phosphatase SAGV88_02060 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase SAGV88_02060 PF13457 GW (Gly-Tryp) dipeptide domain SAGV88_02062 PF04542 Sigma-70 region 2 SAGV88_02062 PF00196 Bacterial regulatory proteins, luxR family SAGV88_02066 PF00923 Transaldolase/Fructose-6-phosphate aldolase SAGV88_02068 PF02537 CrcB-like protein, Camphor Resistance (CrcB) SAGV88_02069 PF02537 CrcB-like protein, Camphor Resistance (CrcB) SAGV88_02070 PF01797 Transposase IS200 like SAGV88_02071 PF01797 Transposase IS200 like SAGV88_02076 PF00248 Aldo/keto reductase family SAGV88_02078 PF02772 S-adenosylmethionine synthetase, central domain SAGV88_02078 PF02773 S-adenosylmethionine synthetase, C-terminal domain SAGV88_02078 PF00438 S-adenosylmethionine synthetase, N-terminal domain SAGV88_02079 PF01293 Phosphoenolpyruvate carboxykinase SAGV88_02080 PF01797 Transposase IS200 like SAGV88_02081 PF01797 Transposase IS200 like SAGV88_02082 PF00326 Prolyl oligopeptidase family SAGV88_02084 PF01809 Putative membrane protein insertion efficiency factor SAGV88_02086 PF00501 AMP-binding enzyme SAGV88_02086 PF13193 AMP-binding enzyme C-terminal domain SAGV88_02104 PF02384 N-6 DNA Methylase SAGV88_02104 PF12161 HsdM N-terminal domain SAGV88_02106 PF00089 Trypsin SAGV88_02108 PF00089 Trypsin SAGV88_02109 PF00089 Trypsin SAGV88_02110 PF00089 Trypsin SAGV88_02116 PF00005 ABC transporter SAGV88_02117 PF00082 Subtilase family SAGV88_02118 PF02441 Flavoprotein SAGV88_02119 PF05147 Lanthionine synthetase C-like protein SAGV88_02120 PF14028 Lantibiotic biosynthesis dehydratase C-term SAGV88_02120 PF04738 Lantibiotic dehydratase, N terminus SAGV88_02120 PF04738 Lantibiotic dehydratase, N terminus SAGV88_02120 PF14028 Lantibiotic biosynthesis dehydratase C-term SAGV88_02121 PF02052 Gallidermin SAGV88_02122 PF07968 Leukocidin/Hemolysin toxin family SAGV88_02123 PF07968 Leukocidin/Hemolysin toxin family SAGV88_02130 PF01593 Flavin containing amine oxidoreductase SAGV88_02131 PF00762 Ferrochelatase SAGV88_02132 PF01208 Uroporphyrinogen decarboxylase (URO-D) SAGV88_02135 PF00005 ABC transporter SAGV88_02136 PF01230 HIT domain SAGV88_02140 PF00639 PPIC-type PPIASE domain SAGV88_02141 PF01966 HD domain SAGV88_02143 PF00149 Calcineurin-like phosphoesterase SAGV88_02144 PF06133 Control of competence regulator ComK, YlbF/YmcA SAGV88_02145 PF04286 Protein of unknown function (DUF445) SAGV88_02147 PF00196 Bacterial regulatory proteins, luxR family SAGV88_02147 PF00072 Response regulator receiver domain SAGV88_02148 PF07730 Histidine kinase SAGV88_02148 PF13185 GAF domain SAGV88_02149 PF01479 S4 domain SAGV88_02149 PF00849 RNA pseudouridylate synthase SAGV88_02150 PF10415 Fumarase C C-terminus SAGV88_02150 PF00206 Lyase SAGV88_02154 PF00588 SpoU rRNA Methylase family SAGV88_02155 PF08331 Domain of unknown function (DUF1730) SAGV88_02156 PF00005 ABC transporter SAGV88_02157 PF00528 Binding-protein-dependent transport system inner membrane component SAGV88_02170 PF01475 Ferric uptake regulator family SAGV88_02171 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain SAGV88_02171 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain SAGV88_02172 PF00578 AhpC/TSA family SAGV88_02173 PF00202 Aminotransferase class-III SAGV88_02174 PF06081 Aromatic acid exporter family member 1 SAGV88_02175 PF00005 ABC transporter SAGV88_02175 PF00664 ABC transporter transmembrane region SAGV88_02176 PF04167 Protein of unknown function (DUF402) SAGV88_02177 PF14815 NUDIX domain SAGV88_02177 PF00633 Helix-hairpin-helix motif SAGV88_02177 PF00730 HhH-GPD superfamily base excision DNA repair protein SAGV88_02178 PF04307 LexA-binding, inner membrane-associated putative hydrolase SAGV88_02180 PF00005 ABC transporter SAGV88_02180 PF01476 LysM domain SAGV88_02182 PF02631 RecX family SAGV88_02183 PF00912 Transglycosylase SAGV88_02185 PF01965 DJ-1/PfpI family SAGV88_02187 PF04055 Radical SAM superfamily SAGV88_02187 PF08756 YfkB-like domain SAGV88_02188 PF03061 Thioesterase superfamily SAGV88_02189 PF02073 Thermophilic metalloprotease (M29) SAGV88_02190 PF06569 Protein of unknown function (DUF1128) SAGV88_02191 PF01451 Low molecular weight phosphotyrosine protein phosphatase SAGV88_02194 PF03631 Virulence factor BrkB SAGV88_02195 PF00196 Bacterial regulatory proteins, luxR family SAGV88_02195 PF00072 Response regulator receiver domain SAGV88_02196 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SAGV88_02196 PF07730 Histidine kinase SAGV88_02199 PF00557 Metallopeptidase family M24 SAGV88_02200 PF06081 Aromatic acid exporter family member 1 SAGV88_02203 PF07685 CobB/CobQ-like glutamine amidotransferase domain SAGV88_02204 PF08245 Mur ligase middle domain SAGV88_02204 PF08353 Domain of unknown function (DUF1727) SAGV88_02205 PF00210 Ferritin-like domain SAGV88_02207 PF11799 impB/mucB/samB family C-terminal domain SAGV88_02207 PF00817 impB/mucB/samB family SAGV88_02209 PF05958 tRNA (Uracil-5-)-methyltransferase SAGV88_02210 PF00781 Diacylglycerol kinase catalytic domain SAGV88_02211 PF02637 GatB domain SAGV88_02211 PF02934 GatB/GatE catalytic domain SAGV88_02212 PF01425 Amidase SAGV88_02213 PF02686 Glu-tRNAGln amidotransferase C subunit SAGV88_02214 PF00474 Sodium:solute symporter family SAGV88_02215 PF07537 CamS sex pheromone cAM373 precursor SAGV88_02216 PF03119 NAD-dependent DNA ligase C4 zinc finger domain SAGV88_02216 PF01653 NAD-dependent DNA ligase adenylation domain SAGV88_02216 PF00533 BRCA1 C Terminus (BRCT) domain SAGV88_02216 PF12826 Helix-hairpin-helix motif SAGV88_02216 PF03120 NAD-dependent DNA ligase OB-fold domain SAGV88_02217 PF13361 UvrD-like helicase C-terminal domain SAGV88_02217 PF00580 UvrD/REP helicase N-terminal domain SAGV88_02218 PF01884 PcrB family SAGV88_02219 PF01371 Trp repressor protein SAGV88_02220 PF10397 Adenylosuccinate lyase C-terminus SAGV88_02220 PF00206 Lyase SAGV88_02221 PF14731 Staphopain proregion SAGV88_02221 PF05543 Staphopain peptidase C47 SAGV88_02223 PF14044 NETI protein SAGV88_02224 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) SAGV88_02225 PF02540 NAD synthase SAGV88_02226 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family SAGV88_02226 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain SAGV88_02226 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain SAGV88_02227 PF02898 Nitric oxide synthase, oxygenase domain SAGV88_02228 PF00800 Prephenate dehydratase SAGV88_02228 PF01842 ACT domain SAGV88_02229 PF00939 Sodium:sulfate symporter transmembrane region SAGV88_02231 PF00857 Isochorismatase family SAGV88_02232 PF01368 DHH family SAGV88_02232 PF02833 DHHA2 domain SAGV88_02234 PF00171 Aldehyde dehydrogenase family SAGV88_02235 PF10282 Lactonase, 7-bladed beta-propeller SAGV88_02245 PF00005 ABC transporter SAGV88_02247 PF00005 ABC transporter SAGV88_02248 PF00392 Bacterial regulatory proteins, gntR family SAGV88_02253 PF03642 MAP domain SAGV88_02254 PF03642 MAP domain SAGV88_02256 PF03372 Endonuclease/Exonuclease/phosphatase family SAGV88_02259 PF11546 Staphylococcal complement inhibitor SCIN SAGV88_02261 PF11434 Chemotaxis-inhibiting protein CHIPS SAGV88_02262 PF08460 Bacterial SH3 domain SAGV88_02262 PF05257 CHAP domain SAGV88_02262 PF01520 N-acetylmuramoyl-L-alanine amidase SAGV88_02263 PF02821 Staphylokinase/Streptokinase family SAGV88_02264 PF08460 Bacterial SH3 domain SAGV88_02264 PF05257 CHAP domain SAGV88_02264 PF01510 N-acetylmuramoyl-L-alanine amidase SAGV88_02271 PF01551 Peptidase family M23 SAGV88_02271 PF04225 Opacity-associated protein A LysM-like domain SAGV88_02306 PF01695 IstB-like ATP binding protein SAGV88_02313 PF00436 Single-strand binding protein family SAGV88_02329 PF03372 Endonuclease/Exonuclease/phosphatase family SAGV88_02330 PF07968 Leukocidin/Hemolysin toxin family SAGV88_02331 PF07968 Leukocidin/Hemolysin toxin family SAGV88_02332 PF01546 Peptidase family M20/M25/M40 SAGV88_02332 PF07687 Peptidase dimerisation domain SAGV88_02333 PF04072 Leucine carboxyl methyltransferase SAGV88_02334 PF01497 Periplasmic binding protein SAGV88_02335 PF02386 Cation transport protein SAGV88_02339 PF10668 Phage terminase small subunit SAGV88_02339 PF03592 Terminase small subunit SAGV88_02340 PF00118 TCP-1/cpn60 chaperonin family SAGV88_02341 PF00166 Chaperonin 10 Kd subunit SAGV88_02342 PF02517 CPBP intramembrane metalloprotease SAGV88_02346 PF00795 Carbon-nitrogen hydrolase SAGV88_02347 PF05372 Delta lysin family SAGV88_02348 PF04647 Accessory gene regulator B SAGV88_02354 PF00294 pfkB family carbohydrate kinase SAGV88_02355 PF08244 Glycosyl hydrolases family 32 C terminal SAGV88_02355 PF00251 Glycosyl hydrolases family 32 N-terminal domain SAGV88_02356 PF00356 Bacterial regulatory proteins, lacI family SAGV88_02356 PF13407 Periplasmic binding protein domain SAGV88_02357 PF00909 Ammonium Transporter Family SAGV88_02358 PF01206 Sulfurtransferase TusA SAGV88_02359 PF04143 Sulphur transport SAGV88_02360 PF06971 Putative DNA-binding protein N-terminus SAGV88_02360 PF02629 CoA binding domain SAGV88_02361 PF12848 ABC transporter SAGV88_02361 PF16326 ABC transporter C-terminal domain SAGV88_02361 PF00005 ABC transporter SAGV88_02363 PF01624 MutS domain I SAGV88_02363 PF05188 MutS domain II SAGV88_02363 PF00488 MutS domain V SAGV88_02363 PF05192 MutS domain III SAGV88_02363 PF05190 MutS family domain IV SAGV88_02364 PF00814 Glycoprotease family SAGV88_02365 PF00583 Acetyltransferase (GNAT) family SAGV88_02366 PF00814 Glycoprotease family SAGV88_02367 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE SAGV88_02369 PF00920 Dehydratase family SAGV88_02370 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain SAGV88_02370 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain SAGV88_02370 PF00205 Thiamine pyrophosphate enzyme, central domain SAGV88_02372 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain SAGV88_02372 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain SAGV88_02375 PF00180 Isocitrate/isopropylmalate dehydrogenase SAGV88_02376 PF00330 Aconitase family (aconitate hydratase) SAGV88_02377 PF00694 Aconitase C-terminal domain SAGV88_02378 PF00291 Pyridoxal-phosphate dependent enzyme SAGV88_02378 PF00585 C-terminal regulatory domain of Threonine dehydratase SAGV88_02388 PF00872 Transposase, Mutator family SAGV88_02390 PF01636 Phosphotransferase enzyme family SAGV88_02391 PF00583 Acetyltransferase (GNAT) family SAGV88_02393 PF17283 SprT-like zinc ribbon domain SAGV88_02393 PF10263 SprT-like family SAGV88_02394 PF09371 Tex-like protein N-terminal domain SAGV88_02394 PF00575 S1 RNA binding domain SAGV88_02394 PF16921 Tex protein YqgF-like domain SAGV88_02394 PF17674 HHH domain SAGV88_02395 PF04542 Sigma-70 region 2 SAGV88_02395 PF04539 Sigma-70 region 3 SAGV88_02395 PF04545 Sigma-70, region 4 SAGV88_02396 PF13581 Histidine kinase-like ATPase domain SAGV88_02397 PF01740 STAS domain SAGV88_02398 PF07228 Stage II sporulation protein E (SpoIIE) SAGV88_02398 PF08673 Phosphoserine phosphatase RsbU, N-terminal domain SAGV88_02399 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system SAGV88_02401 PF01168 Alanine racemase, N-terminal domain SAGV88_02401 PF00842 Alanine racemase, C-terminal domain SAGV88_02402 PF01648 4'-phosphopantetheinyl transferase superfamily SAGV88_02404 PF03703 Bacterial PH domain SAGV88_02407 PF02669 K+-transporting ATPase, c chain SAGV88_02409 PF03814 Potassium-transporting ATPase A subunit SAGV88_02411 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SAGV88_02411 PF13493 Domain of unknown function (DUF4118) SAGV88_02411 PF00512 His Kinase A (phospho-acceptor) domain SAGV88_02411 PF02702 Osmosensitive K+ channel His kinase sensor domain SAGV88_02412 PF00072 Response regulator receiver domain SAGV88_02412 PF00486 Transcriptional regulatory protein, C terminal SAGV88_02413 PF00271 Helicase conserved C-terminal domain SAGV88_02413 PF00270 DEAD/DEAH box helicase SAGV88_02414 PF08245 Mur ligase middle domain SAGV88_02414 PF02875 Mur ligase family, glutamate ligase domain SAGV88_02414 PF01225 Mur ligase family, catalytic domain SAGV88_02415 PF01820 D-ala D-ala ligase N-terminus SAGV88_02415 PF07478 D-ala D-ala ligase C-terminus SAGV88_02416 PF01098 Cell cycle protein SAGV88_02419 PF02583 Metal-sensitive transcriptional repressor SAGV88_02420 PF13091 PLD-like domain SAGV88_02420 PF13396 Phospholipase_D-nuclease N-terminal SAGV88_02421 PF01966 HD domain SAGV88_02424 PF02096 60Kd inner membrane protein SAGV88_02425 PF02581 Thiamine monophosphate synthase SAGV88_02426 PF02110 Hydroxyethylthiazole kinase family SAGV88_02427 PF08543 Phosphomethylpyrimidine kinase SAGV88_02428 PF03070 TENA/THI-4/PQQC family SAGV88_02429 PF06737 Transglycosylase-like domain SAGV88_02430 PF00436 Single-strand binding protein family SAGV88_02432 PF07977 FabA-like domain SAGV88_02433 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) SAGV88_02437 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain SAGV88_02437 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain SAGV88_02438 PF02874 ATP synthase alpha/beta family, beta-barrel domain SAGV88_02438 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain SAGV88_02439 PF00231 ATP synthase SAGV88_02440 PF02874 ATP synthase alpha/beta family, beta-barrel domain SAGV88_02440 PF00306 ATP synthase alpha/beta chain, C terminal domain SAGV88_02440 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain SAGV88_02441 PF00213 ATP synthase delta (OSCP) subunit SAGV88_02442 PF00430 ATP synthase B/B' CF(0) SAGV88_02443 PF00137 ATP synthase subunit C SAGV88_02444 PF00119 ATP synthase A chain SAGV88_02446 PF02350 UDP-N-acetylglucosamine 2-epimerase SAGV88_02448 PF00464 Serine hydroxymethyltransferase SAGV88_02449 PF04260 Protein of unknown function (DUF436) SAGV88_02450 PF01451 Low molecular weight phosphotyrosine protein phosphatase SAGV88_02451 PF01300 Telomere recombination SAGV88_02451 PF03481 Putative GTP-binding controlling metal-binding SAGV88_02452 PF17827 PrmC N-terminal domain SAGV88_02452 PF05175 Methyltransferase small domain SAGV88_02453 PF00472 RF-1 domain SAGV88_02453 PF03462 PCRF domain SAGV88_02454 PF00265 Thymidine kinase SAGV88_02455 PF01197 Ribosomal protein L31 SAGV88_02456 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain SAGV88_02456 PF07498 Rho termination factor, N-terminal domain SAGV88_02456 PF07497 Rho termination factor, RNA-binding domain SAGV88_02457 PF00171 Aldehyde dehydrogenase family SAGV88_02459 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) SAGV88_02460 PF01116 Fructose-bisphosphate aldolase class-II SAGV88_02462 PF00117 Glutamine amidotransferase class-I SAGV88_02462 PF06418 CTP synthase N-terminus SAGV88_02464 PF05066 HB1, ASXL, restriction endonuclease HTH domain SAGV88_02466 PF03630 Fumble SAGV88_02470 PF02664 S-Ribosylhomocysteinase (LuxS) SAGV88_02472 PF02885 Glycosyl transferase family, helical bundle domain SAGV88_02472 PF00591 Glycosyl transferase family, a/b domain SAGV88_02472 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain SAGV88_02473 PF01791 DeoC/LacD family aldolase SAGV88_02474 PF01048 Phosphorylase superfamily SAGV88_02475 PF00210 Ferritin-like domain SAGV88_02480 PF01238 Phosphomannose isomerase type I SAGV88_02481 PF13460 NAD(P)H-binding SAGV88_02482 PF01022 Bacterial regulatory protein, arsR family SAGV88_02483 PF16916 Dimerisation domain of Zinc Transporter SAGV88_02483 PF01545 Cation efflux family SAGV88_02487 PF00239 Resolvase, N terminal domain SAGV88_02487 PF02796 Helix-turn-helix domain of resolvase SAGV88_02491 PF00005 ABC transporter SAGV88_02492 PF01380 SIS domain SAGV88_02493 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SAGV88_02493 PF02378 Phosphotransferase system, EIIC SAGV88_02494 PF00874 PRD domain SAGV88_02494 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 SAGV88_02494 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SAGV88_02494 PF08279 HTH domain SAGV88_02494 PF05043 Mga helix-turn-helix domain SAGV88_02495 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 SAGV88_02496 PF08125 Mannitol dehydrogenase C-terminal domain SAGV88_02496 PF01232 Mannitol dehydrogenase Rossmann domain SAGV88_02497 PF07564 Domain of Unknown Function (DUF1542) SAGV88_02497 PF01468 GA module SAGV88_02498 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I SAGV88_02498 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II SAGV88_02498 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III SAGV88_02498 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain SAGV88_02502 PF00491 Arginase family SAGV88_02514 PF10609 NUBPL iron-transfer P-loop NTPase SAGV88_02515 PF07690 Major Facilitator Superfamily SAGV88_02516 PF17080 Multidrug Resistance efflux pump SAGV88_02517 PF07690 Major Facilitator Superfamily SAGV88_02518 PF03006 Haemolysin-III related SAGV88_02519 PF01704 UTP--glucose-1-phosphate uridylyltransferase SAGV88_02520 PF04307 LexA-binding, inner membrane-associated putative hydrolase SAGV88_02522 PF07670 Nucleoside recognition SAGV88_02523 PF01032 FecCD transport family SAGV88_02524 PF01032 FecCD transport family SAGV88_02525 PF01497 Periplasmic binding protein SAGV88_02526 PF01168 Alanine racemase, N-terminal domain SAGV88_02527 PF04183 IucA / IucC family SAGV88_02527 PF06276 Ferric iron reductase FhuF-like transporter SAGV88_02528 PF05977 Transmembrane secretion effector SAGV88_02534 PF03780 Asp23 family, cell envelope-related function SAGV88_02537 PF02028 BCCT, betaine/carnitine/choline family transporter SAGV88_02539 PF08240 Alcohol dehydrogenase GroES-like domain SAGV88_02539 PF00107 Zinc-binding dehydrogenase SAGV88_02540 PF16884 N-terminal domain of oxidoreductase SAGV88_02540 PF00107 Zinc-binding dehydrogenase SAGV88_02542 PF00232 Glycosyl hydrolase family 1 SAGV88_02543 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SAGV88_02543 PF02378 Phosphotransferase system, EIIC SAGV88_02544 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit SAGV88_02545 PF01791 DeoC/LacD family aldolase SAGV88_02546 PF00294 pfkB family carbohydrate kinase SAGV88_02547 PF02502 Ribose/Galactose Isomerase SAGV88_02548 PF02502 Ribose/Galactose Isomerase SAGV88_02549 PF08220 DeoR-like helix-turn-helix domain SAGV88_02549 PF00455 DeoR C terminal sensor domain SAGV88_02550 PF02146 Sir2 family SAGV88_02553 PF00248 Aldo/keto reductase family SAGV88_02554 PF13411 MerR HTH family regulatory protein SAGV88_02555 PF02884 Polysaccharide lyase family 8, C-terminal beta-sandwich domain SAGV88_02555 PF08124 Polysaccharide lyase family 8, N terminal alpha-helical domain SAGV88_02555 PF02278 Polysaccharide lyase family 8, super-sandwich domain SAGV88_02557 PF05116 Sucrose-6F-phosphate phosphohydrolase SAGV88_02559 PF03306 Alpha-acetolactate decarboxylase SAGV88_02560 PF00205 Thiamine pyrophosphate enzyme, central domain SAGV88_02560 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain SAGV88_02560 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain SAGV88_02565 PF10431 C-terminal, D2-small domain, of ClpB protein SAGV88_02565 PF02861 Clp amino terminal domain, pathogenicity island component SAGV88_02565 PF17871 AAA lid domain SAGV88_02565 PF07724 AAA domain (Cdc48 subfamily) SAGV88_02565 PF00004 ATPase family associated with various cellular activities (AAA) SAGV88_02566 PF00872 Transposase, Mutator family SAGV88_02571 PF00380 Ribosomal protein S9/S16 SAGV88_02572 PF00572 Ribosomal protein L13 SAGV88_02573 PF01416 tRNA pseudouridine synthase SAGV88_02574 PF02361 Cobalt transport protein SAGV88_02575 PF00005 ABC transporter SAGV88_02576 PF00005 ABC transporter SAGV88_02577 PF01196 Ribosomal protein L17 SAGV88_02578 PF01000 RNA polymerase Rpb3/RpoA insert domain SAGV88_02578 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain SAGV88_02578 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain SAGV88_02579 PF00411 Ribosomal protein S11 SAGV88_02580 PF00416 Ribosomal protein S13/S18 SAGV88_02581 PF00444 Ribosomal protein L36 SAGV88_02582 PF01176 Translation initiation factor 1A / IF-1 SAGV88_02583 PF05191 Adenylate kinase, active site lid SAGV88_02584 PF00344 SecY translocase SAGV88_02585 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A SAGV88_02586 PF00327 Ribosomal protein L30p/L7e SAGV88_02587 PF00333 Ribosomal protein S5, N-terminal domain SAGV88_02587 PF03719 Ribosomal protein S5, C-terminal domain SAGV88_02588 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast SAGV88_02589 PF00347 Ribosomal protein L6 SAGV88_02590 PF00410 Ribosomal protein S8 SAGV88_02591 PF00253 Ribosomal protein S14p/S29e SAGV88_02592 PF00281 Ribosomal protein L5 SAGV88_02592 PF00673 ribosomal L5P family C-terminus SAGV88_02593 PF00467 KOW motif SAGV88_02593 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 SAGV88_02594 PF00238 Ribosomal protein L14p/L23e SAGV88_02595 PF00366 Ribosomal protein S17 SAGV88_02596 PF00831 Ribosomal L29 protein SAGV88_02597 PF00252 Ribosomal protein L16p/L10e SAGV88_02598 PF00189 Ribosomal protein S3, C-terminal domain SAGV88_02598 PF07650 KH domain SAGV88_02599 PF00237 Ribosomal protein L22p/L17e SAGV88_02600 PF00203 Ribosomal protein S19 SAGV88_02601 PF00181 Ribosomal Proteins L2, RNA binding domain SAGV88_02601 PF03947 Ribosomal Proteins L2, C-terminal domain SAGV88_02602 PF00276 Ribosomal protein L23 SAGV88_02603 PF00573 Ribosomal protein L4/L1 family SAGV88_02604 PF00297 Ribosomal protein L3 SAGV88_02605 PF00338 Ribosomal protein S10p/S20e SAGV88_02607 PF00860 Permease family SAGV88_02608 PF01751 Toprim domain SAGV88_02608 PF01131 DNA topoisomerase SAGV88_02611 PF06800 Sugar transport protein SAGV88_02616 PF00873 AcrB/AcrD/AcrF family SAGV88_02617 PF02388 FemAB family SAGV88_02619 PF01047 MarR family SAGV88_02621 PF01047 MarR family SAGV88_02624 PF06463 Molybdenum Cofactor Synthesis C SAGV88_02624 PF04055 Radical SAM superfamily SAGV88_02625 PF12804 MobA-like NTP transferase domain SAGV88_02626 PF02597 ThiS family SAGV88_02627 PF02391 MoaE protein SAGV88_02628 PF03205 Molybdopterin guanine dinucleotide synthesis protein B SAGV88_02629 PF03454 MoeA C-terminal region (domain IV) SAGV88_02629 PF03453 MoeA N-terminal region (domain I and II) SAGV88_02629 PF00994 Probable molybdopterin binding domain SAGV88_02630 PF01967 MoaC family SAGV88_02631 PF00994 Probable molybdopterin binding domain SAGV88_02632 PF00899 ThiF family SAGV88_02634 PF03459 TOBE domain SAGV88_02634 PF00005 ABC transporter SAGV88_02635 PF00528 Binding-protein-dependent transport system inner membrane component SAGV88_02637 PF02634 FdhD/NarQ family SAGV88_02639 PF02632 BioY family SAGV88_02640 PF01156 Inosine-uridine preferring nucleoside hydrolase SAGV88_02643 PF08028 Acyl-CoA dehydrogenase, C-terminal domain SAGV88_02643 PF02770 Acyl-CoA dehydrogenase, middle domain SAGV88_02643 PF02771 Acyl-CoA dehydrogenase, N-terminal domain SAGV88_02644 PF03253 Urea transporter SAGV88_02645 PF00547 Urease, gamma subunit SAGV88_02646 PF00699 Urease beta subunit SAGV88_02647 PF00449 Urease alpha-subunit, N-terminal domain SAGV88_02647 PF01979 Amidohydrolase family SAGV88_02648 PF02814 UreE urease accessory protein, N-terminal domain SAGV88_02648 PF05194 UreE urease accessory protein, C-terminal domain SAGV88_02649 PF01730 UreF SAGV88_02650 PF02492 CobW/HypB/UreG, nucleotide-binding domain SAGV88_02651 PF01774 UreD urease accessory protein SAGV88_02656 PF05257 CHAP domain SAGV88_02657 PF03553 Na+/H+ antiporter family SAGV88_02658 PF02317 NAD/NADP octopine/nopaline dehydrogenase, alpha-helical domain SAGV88_02658 PF02558 Ketopantoate reductase PanE/ApbA SAGV88_02661 PF05257 CHAP domain SAGV88_02662 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain SAGV88_02662 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain SAGV88_02663 PF01494 FAD binding domain SAGV88_02664 PF13457 GW (Gly-Tryp) dipeptide domain SAGV88_02664 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase SAGV88_02667 PF01568 Molydopterin dinucleotide binding domain SAGV88_02667 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region SAGV88_02667 PF04879 Molybdopterin oxidoreductase Fe4S4 domain SAGV88_02667 PF00384 Molybdopterin oxidoreductase SAGV88_02667 PF12838 4Fe-4S dicluster domain SAGV88_02669 PF03816 Cell envelope-related transcriptional attenuator domain SAGV88_02674 PF02517 CPBP intramembrane metalloprotease SAGV88_02678 PF00324 Amino acid permease SAGV88_02682 PF13419 Haloacid dehalogenase-like hydrolase SAGV88_02683 PF01758 Sodium Bile acid symporter family SAGV88_02685 PF00367 phosphotransferase system, EIIB SAGV88_02685 PF02378 Phosphotransferase system, EIIC SAGV88_02686 PF01418 Helix-turn-helix domain, rpiR family SAGV88_02686 PF01380 SIS domain SAGV88_02694 PF01546 Peptidase family M20/M25/M40 SAGV88_02694 PF07687 Peptidase dimerisation domain SAGV88_02695 PF01979 Amidohydrolase family SAGV88_02696 PF17392 Urocanase C-terminal domain SAGV88_02696 PF17391 Urocanase N-terminal domain SAGV88_02696 PF01175 Urocanase Rossmann-like domain SAGV88_02697 PF03466 LysR substrate binding domain SAGV88_02697 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SAGV88_02699 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily SAGV88_02700 PF00491 Arginase family SAGV88_02702 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) SAGV88_02703 PF03473 MOSC domain SAGV88_02703 PF03475 3-alpha domain SAGV88_02706 PF02694 Uncharacterised BCR, YnfA/UPF0060 family SAGV88_02709 PF13732 Domain of unknown function (DUF4162) SAGV88_02709 PF00005 ABC transporter SAGV88_02710 PF05656 Protein of unknown function (DUF805) SAGV88_02711 PF02245 Methylpurine-DNA glycosylase (MPG) SAGV88_02713 PF03616 Sodium/glutamate symporter SAGV88_02714 PF01070 FMN-dependent dehydrogenase SAGV88_02715 PF01544 CorA-like Mg2+ transporter protein SAGV88_02718 PF07859 alpha/beta hydrolase fold SAGV88_02718 PF00934 PE family SAGV88_02720 PF07690 Major Facilitator Superfamily SAGV88_02723 PF07690 Major Facilitator Superfamily SAGV88_02725 PF12802 MarR family SAGV88_02729 PF00005 ABC transporter SAGV88_02731 PF00072 Response regulator receiver domain SAGV88_02731 PF00486 Transcriptional regulatory protein, C terminal SAGV88_02732 PF00512 His Kinase A (phospho-acceptor) domain SAGV88_02732 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SAGV88_02732 PF00672 HAMP domain SAGV88_02733 PF04397 LytTr DNA-binding domain SAGV88_02735 PF06039 Malate:quinone oxidoreductase (Mqo) SAGV88_02736 PF02652 L-lactate permease SAGV88_02737 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase SAGV88_02739 PF13673 Acetyltransferase (GNAT) domain SAGV88_02740 PF08240 Alcohol dehydrogenase GroES-like domain SAGV88_02740 PF00107 Zinc-binding dehydrogenase SAGV88_02741 PF00583 Acetyltransferase (GNAT) family SAGV88_02742 PF07992 Pyridine nucleotide-disulphide oxidoreductase SAGV88_02749 PF00367 phosphotransferase system, EIIB SAGV88_02749 PF02378 Phosphotransferase system, EIIC SAGV88_02753 PF16242 Pyridoxamine 5'-phosphate oxidase like SAGV88_02756 PF00375 Sodium:dicarboxylate symporter family SAGV88_02760 PF00011 Hsp20/alpha crystallin family SAGV88_02761 PF07690 Major Facilitator Superfamily SAGV88_02764 PF13411 MerR HTH family regulatory protein SAGV88_02764 PF07739 TipAS antibiotic-recognition domain SAGV88_02765 PF00196 Bacterial regulatory proteins, luxR family SAGV88_02765 PF00072 Response regulator receiver domain SAGV88_02766 PF07730 Histidine kinase SAGV88_02766 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SAGV88_02768 PF02665 Nitrate reductase gamma subunit SAGV88_02770 PF14711 Respiratory nitrate reductase beta C-terminal SAGV88_02770 PF13247 4Fe-4S dicluster domain SAGV88_02771 PF14710 Respiratory nitrate reductase alpha N-terminal SAGV88_02771 PF01568 Molydopterin dinucleotide binding domain SAGV88_02771 PF00384 Molybdopterin oxidoreductase SAGV88_02772 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases SAGV88_02773 PF00355 Rieske [2Fe-2S] domain SAGV88_02774 PF18267 Rubredoxin NAD+ reductase C-terminal domain SAGV88_02774 PF07992 Pyridine nucleotide-disulphide oxidoreductase SAGV88_02774 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain SAGV88_02774 PF01077 Nitrite and sulphite reductase 4Fe-4S domain SAGV88_02774 PF04324 BFD-like [2Fe-2S] binding domain SAGV88_02776 PF00583 Acetyltransferase (GNAT) family SAGV88_02777 PF01226 Formate/nitrite transporter SAGV88_02780 PF01297 Zinc-uptake complex component A periplasmic SAGV88_02780 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment SAGV88_02781 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system SAGV88_02785 PF02388 FemAB family SAGV88_02786 PF00005 ABC transporter SAGV88_02787 PF00528 Binding-protein-dependent transport system inner membrane component SAGV88_02788 PF00497 Bacterial extracellular solute-binding proteins, family 3 SAGV88_02789 PF07690 Major Facilitator Superfamily SAGV88_02791 PF00300 Histidine phosphatase superfamily (branch 1) SAGV88_02792 PF00872 Transposase, Mutator family SAGV88_02793 PF01545 Cation efflux family SAGV88_02793 PF16916 Dimerisation domain of Zinc Transporter SAGV88_02795 PF02216 B domain SAGV88_02795 PF11621 C3 binding domain 4 of IgG-bind protein SBI SAGV88_02796 PF07968 Leukocidin/Hemolysin toxin family SAGV88_02798 PF07968 Leukocidin/Hemolysin toxin family SAGV88_02799 PF07968 Leukocidin/Hemolysin toxin family SAGV88_02801 PF03744 6-carboxyhexanoate--CoA ligase SAGV88_02802 PF00155 Aminotransferase class I and II SAGV88_02803 PF06968 Biotin and Thiamin Synthesis associated domain SAGV88_02803 PF04055 Radical SAM superfamily SAGV88_02804 PF00202 Aminotransferase class-III SAGV88_02806 PF00664 ABC transporter transmembrane region SAGV88_02806 PF00005 ABC transporter SAGV88_02807 PF04954 Siderophore-interacting protein SAGV88_02807 PF00664 ABC transporter transmembrane region SAGV88_02807 PF00005 ABC transporter SAGV88_02807 PF08021 Siderophore-interacting FAD-binding domain SAGV88_02812 PF02595 Glycerate kinase family SAGV88_02814 PF07690 Major Facilitator Superfamily SAGV88_02818 PF00324 Amino acid permease SAGV88_02819 PF00999 Sodium/hydrogen exchanger family SAGV88_02820 PF13520 Amino acid permease SAGV88_02822 PF00144 Beta-lactamase SAGV88_02824 PF08546 Ketopantoate reductase PanE/ApbA C terminal SAGV88_02824 PF02558 Ketopantoate reductase PanE/ApbA SAGV88_02825 PF07690 Major Facilitator Superfamily SAGV88_02826 PF00528 Binding-protein-dependent transport system inner membrane component SAGV88_02827 PF04069 Substrate binding domain of ABC-type glycine betaine transport system SAGV88_02828 PF00528 Binding-protein-dependent transport system inner membrane component SAGV88_02829 PF00571 CBS domain SAGV88_02829 PF00005 ABC transporter SAGV88_02831 PF08818 Domain of unknown function (DU1801) SAGV88_02832 PF13520 Amino acid permease SAGV88_02833 PF00135 Carboxylesterase family SAGV88_02834 PF07690 Major Facilitator Superfamily SAGV88_02836 PF03649 Uncharacterised protein family (UPF0014) SAGV88_02837 PF00005 ABC transporter SAGV88_02838 PF05343 M42 glutamyl aminopeptidase SAGV88_02839 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system SAGV88_02841 PF06998 Protein of unknown function (DUF1307) SAGV88_02842 PF01645 Conserved region in glutamate synthase SAGV88_02845 PF07690 Major Facilitator Superfamily SAGV88_02846 PF00005 ABC transporter SAGV88_02847 PF00005 ABC transporter SAGV88_02848 PF00528 Binding-protein-dependent transport system inner membrane component SAGV88_02848 PF12911 N-terminal TM domain of oligopeptide transport permease C SAGV88_02849 PF00528 Binding-protein-dependent transport system inner membrane component SAGV88_02850 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle SAGV88_02851 PF10100 Staphylopine dehydrogenase SAGV88_02858 PF03806 AbgT putative transporter family SAGV88_02859 PF02627 Carboxymuconolactone decarboxylase family SAGV88_02863 PF00106 short chain dehydrogenase SAGV88_02867 PF04507 Csa1 family SAGV88_02868 PF04507 Csa1 family SAGV88_02870 PF00293 NUDIX domain SAGV88_02871 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain SAGV88_02871 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III SAGV88_02871 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I SAGV88_02871 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II SAGV88_02875 PF00746 LPXTG cell wall anchor motif SAGV88_02875 PF07501 G5 domain SAGV88_02875 PF17041 E domain SAGV88_02875 PF04650 YSIRK type signal peptide SAGV88_02877 PF13463 Winged helix DNA-binding domain SAGV88_02879 PF00483 Nucleotidyl transferase SAGV88_02880 PF10425 C-terminus of bacterial fibrinogen-binding adhesin SAGV88_02880 PF02986 Fibronectin binding repeat SAGV88_02880 PF17961 Bacterial Ig domain SAGV88_02880 PF00746 LPXTG cell wall anchor motif SAGV88_02880 PF04650 YSIRK type signal peptide SAGV88_02882 PF04650 YSIRK type signal peptide SAGV88_02882 PF10425 C-terminus of bacterial fibrinogen-binding adhesin SAGV88_02882 PF00746 LPXTG cell wall anchor motif SAGV88_02882 PF02986 Fibronectin binding repeat SAGV88_02882 PF17961 Bacterial Ig domain SAGV88_02885 PF02447 GntP family permease SAGV88_02886 PF00370 FGGY family of carbohydrate kinases, N-terminal domain SAGV88_02886 PF02782 FGGY family of carbohydrate kinases, C-terminal domain SAGV88_02887 PF00392 Bacterial regulatory proteins, gntR family SAGV88_02887 PF07729 FCD domain SAGV88_02888 PF13411 MerR HTH family regulatory protein SAGV88_02889 PF04607 Region found in RelA / SpoT proteins SAGV88_02890 PF09954 Uncharacterized protein conserved in bacteria (DUF2188) SAGV88_02892 PF07690 Major Facilitator Superfamily SAGV88_02895 PF09335 SNARE associated Golgi protein SAGV88_02896 PF07690 Major Facilitator Superfamily SAGV88_02897 PF01047 MarR family SAGV88_02898 PF00005 ABC transporter SAGV88_02900 PF06874 Firmicute fructose-1,6-bisphosphatase SAGV88_02902 PF01738 Dienelactone hydrolase family SAGV88_02903 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily SAGV88_02904 PF01047 MarR family SAGV88_02906 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily SAGV88_02907 PF00881 Nitroreductase family SAGV88_02908 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain SAGV88_02908 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain SAGV88_02910 PF00005 ABC transporter SAGV88_02912 PF04203 Sortase domain SAGV88_02915 PF03313 Serine dehydratase alpha chain SAGV88_02916 PF01842 ACT domain SAGV88_02916 PF03315 Serine dehydratase beta chain SAGV88_02919 PF00892 EamA-like transporter family SAGV88_02920 PF07859 alpha/beta hydrolase fold SAGV88_02920 PF00934 PE family SAGV88_02924 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 SAGV88_02924 PF00367 phosphotransferase system, EIIB SAGV88_02924 PF02378 Phosphotransferase system, EIIC SAGV88_02925 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain SAGV88_02925 PF00205 Thiamine pyrophosphate enzyme, central domain SAGV88_02925 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain SAGV88_02926 PF04172 LrgB-like family SAGV88_02927 PF03788 LrgA family SAGV88_02928 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SAGV88_02928 PF03466 LysR substrate binding domain SAGV88_02930 PF05257 CHAP domain SAGV88_02932 PF00368 Hydroxymethylglutaryl-coenzyme A reductase SAGV88_02934 PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal SAGV88_02934 PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal SAGV88_02935 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain SAGV88_02935 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain SAGV88_02936 PF00004 ATPase family associated with various cellular activities (AAA) SAGV88_02936 PF07724 AAA domain (Cdc48 subfamily) SAGV88_02936 PF10431 C-terminal, D2-small domain, of ClpB protein SAGV88_02936 PF17871 AAA lid domain SAGV88_02938 PF07664 Ferrous iron transport protein B C terminus SAGV88_02938 PF17910 FeoB cytosolic helical domain SAGV88_02938 PF02421 Ferrous iron transport protein B SAGV88_02938 PF07670 Nucleoside recognition SAGV88_02941 PF03176 MMPL family SAGV88_02944 PF00171 Aldehyde dehydrogenase family SAGV88_02945 PF14602 Hexapeptide repeat of succinyl-transferase SAGV88_02945 PF00132 Bacterial transferase hexapeptide (six repeats) SAGV88_02945 PF12464 Maltose acetyltransferase SAGV88_02947 PF00403 Heavy-metal-associated domain SAGV88_02949 PF00403 Heavy-metal-associated domain SAGV88_02950 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain SAGV88_02950 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain SAGV88_02951 PF00155 Aminotransferase class I and II SAGV88_02952 PF01593 Flavin containing amine oxidoreductase SAGV88_02954 PF00535 Glycosyl transferase family 2 SAGV88_02955 PF01593 Flavin containing amine oxidoreductase SAGV88_02958 PF01757 Acyltransferase family SAGV88_02960 PF01464 Transglycosylase SLT domain SAGV88_02965 PF05979 Bacterial protein of unknown function (DUF896) SAGV88_02969 PF00440 Bacterial regulatory proteins, tetR family SAGV88_02970 PF00106 short chain dehydrogenase SAGV88_02972 PF00561 alpha/beta hydrolase fold SAGV88_02973 PF02492 CobW/HypB/UreG, nucleotide-binding domain SAGV88_02973 PF07683 Cobalamin synthesis protein cobW C-terminal domain SAGV88_02976 PF00665 Integrase core domain SAGV88_02976 PF13936 Helix-turn-helix domain SAGV88_02977 PF13401 AAA domain SAGV88_02979 PF00239 Resolvase, N terminal domain SAGV88_02979 PF02796 Helix-turn-helix domain of resolvase SAGV88_02980 PF03965 Penicillinase repressor SAGV88_02981 PF00905 Penicillin binding protein transpeptidase domain SAGV88_02981 PF05569 BlaR1 peptidase M56 SAGV88_02982 PF08139 Prokaryotic membrane lipoprotein lipid attachment site SAGV88_02992 PF12642 Conjugative transposon protein TcpC SAGV88_02993 PF02486 Replication initiation factor SAGV88_02993 PF18106 Rolling Circle replication initiation protein N-terminal domain SAGV88_03000 PF03881 Fructosamine kinase SAGV88_03001 PF01180 Dihydroorotate dehydrogenase SAGV88_03003 PF02677 Epoxyqueuosine reductase QueH SAGV88_03007 PF02261 Aspartate decarboxylase SAGV88_03008 PF02569 Pantoate-beta-alanine ligase SAGV88_03009 PF02548 Ketopantoate hydroxymethyltransferase SAGV88_03011 PF03306 Alpha-acetolactate decarboxylase SAGV88_03012 PF00056 lactate/malate dehydrogenase, NAD binding domain SAGV88_03012 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain SAGV88_03013 PF13520 Amino acid permease SAGV88_03014 PF00202 Aminotransferase class-III SAGV88_03018 PF00274 Fructose-bisphosphate aldolase class-I SAGV88_03019 PF06039 Malate:quinone oxidoreductase (Mqo) SAGV88_03020 PF00501 AMP-binding enzyme SAGV88_03020 PF13193 AMP-binding enzyme C-terminal domain SAGV88_03023 PF00732 GMC oxidoreductase SAGV88_03023 PF05199 GMC oxidoreductase SAGV88_03024 PF00171 Aldehyde dehydrogenase family SAGV88_03026 PF02028 BCCT, betaine/carnitine/choline family transporter SAGV88_03028 PF03477 ATP cone domain SAGV88_03028 PF13597 Anaerobic ribonucleoside-triphosphate reductase SAGV88_03029 PF03600 Citrate transporter SAGV88_03031 PF14824 Sirohaem biosynthesis protein central SAGV88_03032 PF00175 Oxidoreductase NAD-binding domain SAGV88_03032 PF00258 Flavodoxin SAGV88_03032 PF00667 FAD binding domain SAGV88_03033 PF00255 Glutathione peroxidase SAGV88_03037 PF00005 ABC transporter SAGV88_03038 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SAGV88_03039 PF00486 Transcriptional regulatory protein, C terminal SAGV88_03039 PF00072 Response regulator receiver domain SAGV88_03041 PF00245 Alkaline phosphatase SAGV88_03043 PF01047 MarR family SAGV88_03045 PF17961 Bacterial Ig domain SAGV88_03045 PF10425 C-terminus of bacterial fibrinogen-binding adhesin SAGV88_03045 PF04650 YSIRK type signal peptide SAGV88_03045 PF00746 LPXTG cell wall anchor motif SAGV88_03046 PF00027 Cyclic nucleotide-binding domain SAGV88_03046 PF13545 Crp-like helix-turn-helix domain SAGV88_03047 PF00696 Amino acid kinase family SAGV88_03048 PF13520 Amino acid permease SAGV88_03049 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain SAGV88_03049 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain SAGV88_03051 PF01316 Arginine repressor, DNA binding domain SAGV88_03051 PF02863 Arginine repressor, C-terminal domain SAGV88_03052 PF02868 Thermolysin metallopeptidase, alpha-helical domain SAGV88_03052 PF01447 Thermolysin metallopeptidase, catalytic domain SAGV88_03052 PF03413 Peptidase propeptide and YPEB domain SAGV88_03052 PF07504 Fungalysin/Thermolysin Propeptide Motif SAGV88_03058 PF00874 PRD domain SAGV88_03058 PF08279 HTH domain SAGV88_03058 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 SAGV88_03058 PF05043 Mga helix-turn-helix domain SAGV88_03059 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SAGV88_03059 PF02378 Phosphotransferase system, EIIC SAGV88_03059 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 SAGV88_03060 PF01238 Phosphomannose isomerase type I SAGV88_03061 PF01061 ABC-2 type transporter SAGV88_03062 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase SAGV88_03062 PF05257 CHAP domain SAGV88_03063 PF00550 Phosphopantetheine attachment site SAGV88_03063 PF00857 Isochorismatase family SAGV88_03064 PF01468 GA module SAGV88_03066 PF00534 Glycosyl transferases group 1 SAGV88_03067 PF07517 SecA DEAD-like domain SAGV88_03067 PF07516 SecA Wing and Scaffold domain SAGV88_03067 PF01043 SecA preprotein cross-linking domain SAGV88_03068 PF15432 Accessory Sec secretory system ASP3 SAGV88_03070 PF16993 Accessory Sec system protein Asp1 SAGV88_03071 PF00344 SecY translocase SAGV88_03073 PF00746 LPXTG cell wall anchor motif SAGV88_03073 PF00746 LPXTG cell wall anchor motif SAGV88_03074 PF01613 Flavin reductase like domain SAGV88_03079 PF01613 Flavin reductase like domain SAGV88_03080 PF01625 Peptide methionine sulfoxide reductase SAGV88_03080 PF01641 SelR domain SAGV88_03083 PF13614 AAA domain SAGV88_03084 PF02706 Chain length determinant protein SAGV88_03085 PF18665 Tetracyclin repressor-like, C-terminal domain SAGV88_03085 PF00440 Bacterial regulatory proteins, tetR family SAGV88_03087 PF01522 Polysaccharide deacetylase SAGV88_03088 PF01757 Acyltransferase family SAGV88_03089 PF01757 Acyltransferase family SAGV88_03092 PF04650 YSIRK type signal peptide SAGV88_03095 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase SAGV88_03095 PF01502 Phosphoribosyl-AMP cyclohydrolase SAGV88_03096 PF00977 Histidine biosynthesis protein SAGV88_03097 PF00977 Histidine biosynthesis protein SAGV88_03098 PF00117 Glutamine amidotransferase class-I SAGV88_03100 PF00155 Aminotransferase class I and II SAGV88_03101 PF00815 Histidinol dehydrogenase SAGV88_03102 PF01634 ATP phosphoribosyltransferase SAGV88_03103 PF13393 Histidyl-tRNA synthetase SAGV88_03107 PF00005 ABC transporter SAGV88_03107 PF12558 ATP-binding cassette cobalt transporter SAGV88_03108 PF07155 ECF-type riboflavin transporter, S component SAGV88_03110 PF04264 YceI-like domain SAGV88_03111 PF08450 SMP-30/Gluconolactonase/LRE-like region SAGV88_03112 PF00581 Rhodanese-like domain SAGV88_03112 PF12368 Rhodanase C-terminal SAGV88_03112 PF17773 UPF0176 acylphosphatase like domain SAGV88_03113 PF01470 Pyroglutamyl peptidase SAGV88_03115 PF05737 Collagen binding domain SAGV88_03115 PF05738 Cna protein B-type domain SAGV88_03115 PF05737 Collagen binding domain SAGV88_03115 PF17802 Prealbumin-like fold domain SAGV88_03115 PF17802 Prealbumin-like fold domain SAGV88_03115 PF05738 Cna protein B-type domain SAGV88_03116 PF00939 Sodium:sulfate symporter transmembrane region SAGV88_03117 PF00892 EamA-like transporter family SAGV88_03120 PF03824 High-affinity nickel-transport protein SAGV88_03121 PF00797 N-acetyltransferase SAGV88_03124 PF00005 ABC transporter SAGV88_03125 PF02687 FtsX-like permease family SAGV88_03132 PF05922 Peptidase inhibitor I9 SAGV88_03132 PF00082 Subtilase family SAGV88_03133 PF00313 'Cold-shock' DNA-binding domain SAGV88_03138 PF17762 HTH domain found in ParB protein SAGV88_03138 PF02195 ParB-like nuclease domain SAGV88_03139 PF02527 rRNA small subunit methyltransferase G SAGV88_03140 PF13932 GidA associated domain SAGV88_03140 PF01134 Glucose inhibited division protein A SAGV88_03141 PF01926 50S ribosome-binding GTPase SAGV88_03141 PF10396 GTP-binding protein TrmE N-terminus SAGV88_03141 PF12631 MnmE helical domain SAGV88_03142 PF00825 Ribonuclease P SAGV88_03143 PF00468 Ribosomal protein L34 SAGV88_03144 PF00302 Chloramphenicol acetyltransferase SAGV88_03146 PF01446 Replication protein SAGV88_03206 PF01047 MarR family SAGV88_03208 PF01497 Periplasmic binding protein SAGV88_03209 PF16929 Accessory Sec system GspB-transporter SAGV88_03210 PF04397 LytTr DNA-binding domain SAGV88_03210 PF00072 Response regulator receiver domain SAGV88_03254 PF01370 NAD dependent epimerase/dehydratase family SAGV88_03255 PF02397 Bacterial sugar transferase SAGV88_03322 PF02219 Methylenetetrahydrofolate reductase SAGV88_03322 PF02574 Homocysteine S-methyltransferase SAGV88_03341 PF00872 Transposase, Mutator family SAGV88_03354 PF00872 Transposase, Mutator family SAGV88_03393 PF00872 Transposase, Mutator family SAGV88_03402 PF00872 Transposase, Mutator family SAGV88_03422 PF00872 Transposase, Mutator family SAGV88_03426 PF00872 Transposase, Mutator family SAGV88_03427 PF00872 Transposase, Mutator family SAGV88_03437 PF07972 NrdI Flavodoxin like SAGV88_03438 PF02867 Ribonucleotide reductase, barrel domain SAGV88_03438 PF08343 Ribonucleotide reductase N-terminal SAGV88_03438 PF00317 Ribonucleotide reductase, all-alpha domain SAGV88_03453 PF00872 Transposase, Mutator family SAGV88_03583 PF00005 ABC transporter SAGV88_03613 PF00872 Transposase, Mutator family SAGV88_03625 PF00574 Clp protease SAGV88_03680 PF01797 Transposase IS200 like SAGV88_03691 PF00398 Ribosomal RNA adenine dimethylase SAGV88_03692 PF13427 Domain of unknown function (DUF4111) SAGV88_03692 PF01909 Nucleotidyltransferase domain SAGV88_03694 PF02899 Phage integrase, N-terminal SAM-like domain SAGV88_03694 PF00589 Phage integrase family SAGV88_03714 PF01022 Bacterial regulatory protein, arsR family SAGV88_03728 PF00872 Transposase, Mutator family SAGV88_03766 PF00872 Transposase, Mutator family SAGV88_03812 PF00872 Transposase, Mutator family SAGV88_03813 PF00872 Transposase, Mutator family SAGV88_03815 PF00872 Transposase, Mutator family SAGV88_03839 PF02457 DisA bacterial checkpoint controller nucleotide-binding SAGV88_03889 PF02687 FtsX-like permease family SAGV88_03900 PF00872 Transposase, Mutator family SAGV88_03902 PF00872 Transposase, Mutator family SAGV88_03952 PF13401 AAA domain SAGV88_03953 PF09299 Mu transposase, C-terminal SAGV88_03953 PF00665 Integrase core domain SAGV88_03992 PF00535 Glycosyl transferase family 2 SAGV88_03995 PF00475 Imidazoleglycerol-phosphate dehydratase SAGV88_04020 PF13411 MerR HTH family regulatory protein