CRN29_00060 SM00450 Rhodanese Homology Domain CRN29_00070 SM00867 YceI-like domain CRN29_00125 SM00382 ATPases associated with a variety of cellular activities CRN29_00195 SM00062 Bacterial periplasmic substrate-binding proteins CRN29_00200 SM00382 ATPases associated with a variety of cellular activities CRN29_00250 SM00957 SecA DEAD-like domain CRN29_00250 SM00958 SecA preprotein cross-linking domain CRN29_00295 SM00903 Flavin reductase like domain CRN29_00300 SM00829 Enoylreductase CRN29_00335 SM00382 ATPases associated with a variety of cellular activities CRN29_00370 SM00047 Lysozyme subfamily 2 CRN29_00400 SM00487 DEAD-like helicases superfamily CRN29_00515 SM00854 Bacterial capsule synthesis protein PGA_cap CRN29_00535 SM00347 helix_turn_helix multiple antibiotic resistance protein CRN29_00575 SM00098 Alkaline phosphatase homologues CRN29_00580 SM00448 cheY-homologous receiver domain CRN29_00580 SM00862 Transcriptional regulatory protein, C terminal CRN29_00585 SM00387 Histidine kinase-like ATPases CRN29_00590 SM00382 ATPases associated with a variety of cellular activities CRN29_01060 SM01266 CRN29_01060 CRN29_01080 SM00899 CRN29_01080 CRN29_01160 SM00829 Enoylreductase CRN29_01190 SM00342 helix_turn_helix, arabinose operon control protein CRN29_01210 SM00854 Bacterial capsule synthesis protein PGA_cap CRN29_01385 SM00954 Region found in RelA / SpoT proteins CRN29_01395 SM00422 helix_turn_helix, mercury resistance CRN29_01400 SM00345 helix_turn_helix gluconate operon transcriptional repressor CRN29_01400 SM00895 CRN29_01400 CRN29_01495 SM00382 ATPases associated with a variety of cellular activities CRN29_01525 SM00829 Enoylreductase CRN29_01530 SM00116 Domain in cystathionine beta-synthase and other proteins. CRN29_01530 SM00382 ATPases associated with a variety of cellular activities CRN29_01615 SM00871 Bacterial transcription activator, effector binding domain CRN29_01655 SM00855 Phosphoglycerate mutase family CRN29_01670 SM00062 Bacterial periplasmic substrate-binding proteins CRN29_01670 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. CRN29_01680 SM00382 ATPases associated with a variety of cellular activities CRN29_01685 SM01022 CRN29_01685 CRN29_01755 SM00926 Molybdopterin oxidoreductase Fe4S4 domain CRN29_01780 SM00387 Histidine kinase-like ATPases CRN29_01785 SM00421 helix_turn_helix, Lux Regulon CRN29_01785 SM00448 cheY-homologous receiver domain CRN29_01800 SM00347 helix_turn_helix multiple antibiotic resistance protein CRN29_01830 SM00342 helix_turn_helix, arabinose operon control protein CRN29_01885 SM00829 Enoylreductase CRN29_01950 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CRN29_01950 SM00387 Histidine kinase-like ATPases CRN29_01950 SM00388 His Kinase A (phosphoacceptor) domain CRN29_01955 SM00448 cheY-homologous receiver domain CRN29_01955 SM00862 Transcriptional regulatory protein, C terminal CRN29_01965 SM00382 ATPases associated with a variety of cellular activities CRN29_01975 SM00347 helix_turn_helix multiple antibiotic resistance protein CRN29_02065 SM00530 Helix-turn-helix XRE-family like proteins CRN29_02080 SM00382 ATPases associated with a variety of cellular activities CRN29_02230 SM00420 helix_turn_helix, Deoxyribose operon repressor CRN29_02245 SM00926 Molybdopterin oxidoreductase Fe4S4 domain CRN29_02245 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region CRN29_02260 SM00047 Lysozyme subfamily 2 CRN29_02310 SM00342 helix_turn_helix, arabinose operon control protein CRN29_02345 SM00988 UreE urease accessory protein, N-terminal domain CRN29_02410 SM00382 ATPases associated with a variety of cellular activities CRN29_02420 SM00852 Probable molybdopterin binding domain CRN29_02430 SM00852 Probable molybdopterin binding domain CRN29_02455 SM00729 Elongator protein 3, MiaB family, Radical SAM CRN29_02470 SM00347 helix_turn_helix multiple antibiotic resistance protein CRN29_02525 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain CRN29_02525 SM00437 Bacterial DNA topoisomerase I DNA-binding domain CRN29_02525 SM00493 CRN29_02525 CRN29_02540 SM01403 CRN29_02540 CRN29_02560 SM01382 CRN29_02560 CRN29_02560 SM01383 CRN29_02560 CRN29_02575 SM00322 K homology RNA-binding domain CRN29_02595 SM01374 CRN29_02595 CRN29_02600 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. CRN29_02655 SM00316 Ribosomal protein S1-like RNA-binding domain CRN29_02675 SM00662 RNA polymerases D CRN29_02685 SM00382 ATPases associated with a variety of cellular activities CRN29_02690 SM00382 ATPases associated with a variety of cellular activities CRN29_02720 SM00420 helix_turn_helix, Deoxyribose operon repressor CRN29_02720 SM01134 CRN29_02720 CRN29_02740 SM01133 CRN29_02740 CRN29_02770 SM00829 Enoylreductase CRN29_02775 SM00829 Enoylreductase CRN29_02995 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CRN29_03035 SM01133 CRN29_03035 CRN29_03040 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain CRN29_03125 SM00357 Cold shock protein domain CRN29_03125 SM00382 ATPases associated with a variety of cellular activities CRN29_03125 SM00959 Rho termination factor, N-terminal domain CRN29_03140 SM00937 CRN29_03140 CRN29_03155 SM00226 Low molecular weight phosphatase family CRN29_03215 SM00382 ATPases associated with a variety of cellular activities CRN29_03280 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CRN29_03285 SM00155 Phospholipase D. Active site motifs. CRN29_03320 SM00487 DEAD-like helicases superfamily CRN29_03320 SM00490 helicase superfamily c-terminal domain CRN29_03345 SM01005 Alanine racemase, C-terminal domain CRN29_03360 SM00331 Sigma factor PP2C-like phosphatases CRN29_03360 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain CRN29_03380 SM00316 Ribosomal protein S1-like RNA-binding domain CRN29_03380 SM00732 Likely ribonuclease with RNase H fold. CRN29_03385 SM00731 SprT homologues. CRN29_03430 SM01329 CRN29_03430 CRN29_03435 SM00917 LeuA allosteric (dimerisation) domain CRN29_03480 SM00534 ATPase domain of DNA mismatch repair MUTS family CRN29_03485 SM00382 ATPases associated with a variety of cellular activities CRN29_03490 SM00881 CoA binding domain CRN29_03515 SM00354 helix_turn _helix lactose operon repressor CRN29_03520 SM00640 Glycosyl hydrolases family 32 CRN29_03530 SM00448 cheY-homologous receiver domain CRN29_03530 SM00850 LytTr DNA-binding domain CRN29_03540 SM00794 Staphylococcal AgrD protein CRN29_03545 SM00793 Accessory gene regulator B CRN29_03570 SM00883 Chaperonin 10 Kd subunit CRN29_03605 SM00345 helix_turn_helix gluconate operon transcriptional repressor CRN29_03610 SM00382 ATPases associated with a variety of cellular activities CRN29_03620 SM00382 ATPases associated with a variety of cellular activities CRN29_03680 SM01131 CRN29_03680 CRN29_03690 SM00710 Parallel beta-helix repeats CRN29_03725 SM00998 Adenylosuccinate lyase C-terminus CRN29_03745 SM00278 Helix-hairpin-helix DNA-binding motif class 1 CRN29_03745 SM00292 breast cancer carboxy-terminal domain CRN29_03745 SM00532 Ligase N family CRN29_03770 SM00845 GatB domain CRN29_03775 SM00046 Diacylglycerol kinase catalytic domain (presumed) CRN29_03795 SM00479 CRN29_03795 CRN29_03840 SM00387 Histidine kinase-like ATPases CRN29_03845 SM00421 helix_turn_helix, Lux Regulon CRN29_03845 SM00448 cheY-homologous receiver domain CRN29_03860 SM00226 Low molecular weight phosphatase family CRN29_03925 SM00478 endonuclease III CRN29_03935 SM00382 ATPases associated with a variety of cellular activities CRN29_04130 SM00062 Bacterial periplasmic substrate-binding proteins CRN29_04130 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. CRN29_04135 SM00382 ATPases associated with a variety of cellular activities CRN29_04180 SM00421 helix_turn_helix, Lux Regulon CRN29_04180 SM00448 cheY-homologous receiver domain CRN29_04185 SM00530 Helix-turn-helix XRE-family like proteins CRN29_04210 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CRN29_04240 SM00382 ATPases associated with a variety of cellular activities CRN29_04320 SM00974 CRN29_04320 CRN29_04330 SM00530 Helix-turn-helix XRE-family like proteins CRN29_04585 SM00631 CRN29_04585 CRN29_04605 SM00047 Lysozyme subfamily 2 CRN29_04640 SM00287 Bacterial SH3 domain homologues CRN29_04640 SM00644 CRN29_04640 CRN29_04670 SM01234 CRN29_04670 CRN29_04745 SM00047 Lysozyme subfamily 2 CRN29_04795 SM00729 Elongator protein 3, MiaB family, Radical SAM CRN29_04810 SM00450 Rhodanese Homology Domain CRN29_04830 SM00363 S4 RNA-binding domain CRN29_04860 SM00849 Metallo-beta-lactamase superfamily CRN29_04890 SM00843 CRN29_04890 CRN29_04910 SM00830 Chorismate mutase type II CRN29_04915 SM00354 helix_turn _helix lactose operon repressor CRN29_04945 SM00363 S4 RNA-binding domain CRN29_04950 SM00347 helix_turn_helix multiple antibiotic resistance protein CRN29_04965 SM00563 Phosphate acyltransferases CRN29_05000 SM00363 S4 RNA-binding domain CRN29_05000 SM01390 CRN29_05000 CRN29_05010 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CRN29_05025 SM00981 CRN29_05025 CRN29_05055 SM01002 Alanine dehydrogenase/PNT, C-terminal domain CRN29_05055 SM01003 Alanine dehydrogenase/PNT, N-terminal domain CRN29_05065 SM00849 Metallo-beta-lactamase superfamily CRN29_05085 SM00481 DNA polymerase alpha chain like domain CRN29_05090 SM00919 Malic enzyme, NAD binding domain CRN29_05090 SM01274 CRN29_05090 CRN29_05125 SM01329 CRN29_05125 CRN29_05130 SM00448 cheY-homologous receiver domain CRN29_05130 SM00862 Transcriptional regulatory protein, C terminal CRN29_05135 SM00387 Histidine kinase-like ATPases CRN29_05135 SM00388 His Kinase A (phosphoacceptor) domain CRN29_05140 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs CRN29_05140 SM00475 5'-3' exonuclease CRN29_05140 SM00482 DNA polymerase A domain CRN29_05145 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain CRN29_05145 SM01232 CRN29_05145 CRN29_05155 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CRN29_05175 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain CRN29_05215 SM00382 ATPases associated with a variety of cellular activities CRN29_05215 SM00994 ClpX C4-type zinc finger CRN29_05215 SM01086 C-terminal, D2-small domain, of ClpB protein CRN29_05245 SM01004 Delta-aminolevulinic acid dehydratase CRN29_05340 SM00278 Helix-hairpin-helix DNA-binding motif class 1 CRN29_05345 SM00382 ATPases associated with a variety of cellular activities CRN29_05360 SM01323 CRN29_05360 CRN29_05380 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CRN29_05380 SM00954 Region found in RelA / SpoT proteins CRN29_05390 SM00287 Bacterial SH3 domain homologues CRN29_05390 SM00646 CRN29_05390 CRN29_05415 SM00382 ATPases associated with a variety of cellular activities CRN29_05445 SM00028 Tetratricopeptide repeats CRN29_05450 SM00382 ATPases associated with a variety of cellular activities CRN29_05455 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain CRN29_05465 SM00732 Likely ribonuclease with RNase H fold. CRN29_05500 SM00796 Allophanate hydrolase subunit 1 CRN29_05505 SM00797 Allophanate hydrolase subunit 2 CRN29_05515 SM00878 Biotin carboxylase C-terminal domain CRN29_05550 SM01103 CRN29_05550 CRN29_05560 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CRN29_05575 SM00278 Helix-hairpin-helix DNA-binding motif class 1 CRN29_05600 SM00838 Elongation factor G C-terminus CRN29_05605 SM00729 Elongator protein 3, MiaB family, Radical SAM CRN29_05625 SM00271 DnaJ molecular chaperone homology domain CRN29_05640 SM00729 Elongator protein 3, MiaB family, Radical SAM CRN29_05710 SM00400 zinc finger CRN29_05710 SM00493 CRN29_05710 CRN29_05730 SM00487 DEAD-like helicases superfamily CRN29_05730 SM00490 helicase superfamily c-terminal domain CRN29_05735 SM00518 AP endonuclease family 2 CRN29_05740 SM00382 ATPases associated with a variety of cellular activities CRN29_05795 SM00849 Metallo-beta-lactamase superfamily CRN29_05855 SM00450 Rhodanese Homology Domain CRN29_05880 SM00841 Elongation factor P, C-terminal CRN29_05880 SM01185 CRN29_05880 CRN29_05890 SM00878 Biotin carboxylase C-terminal domain CRN29_05940 SM00861 Transketolase, pyrimidine binding domain CRN29_05965 SM01350 CRN29_05965 CRN29_05970 SM00642 Alpha-amylase domain CRN29_05975 SM00342 helix_turn_helix, arabinose operon control protein CRN29_05975 SM00871 Bacterial transcription activator, effector binding domain CRN29_06040 SM00363 S4 RNA-binding domain CRN29_06045 SM00448 cheY-homologous receiver domain CRN29_06045 SM00862 Transcriptional regulatory protein, C terminal CRN29_06050 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CRN29_06050 SM00387 Histidine kinase-like ATPases CRN29_06050 SM00388 His Kinase A (phosphoacceptor) domain CRN29_06070 SM00487 DEAD-like helicases superfamily CRN29_06070 SM00490 helicase superfamily c-terminal domain CRN29_06075 SM00257 Lysin motif CRN29_06085 SM00870 CRN29_06085 CRN29_06095 SM00316 Ribosomal protein S1-like RNA-binding domain CRN29_06110 SM00411 bacterial (prokaryotic) histone like domain CRN29_06130 SM00562 CRN29_06130 CRN29_06150 SM00028 Tetratricopeptide repeats CRN29_06155 SM00914 CRN29_06155 CRN29_06190 SM00479 CRN29_06190 CRN29_06190 SM00491 CRN29_06190 CRN29_06205 SM00478 endonuclease III CRN29_06205 SM00525 CRN29_06205 CRN29_06245 SM00981 CRN29_06245 CRN29_06260 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs CRN29_06260 SM00475 5'-3' exonuclease CRN29_06285 SM00932 Scaffold protein Nfu/NifU N terminal CRN29_06290 SM00567 E-Z type HEAT repeats CRN29_06290 SM00932 Scaffold protein Nfu/NifU N terminal CRN29_06335 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CRN29_06335 SM00245 tail specific protease CRN29_06350 SM00014 Acid phosphatase homologues CRN29_06355 SM00382 ATPases associated with a variety of cellular activities CRN29_06385 SM00420 helix_turn_helix, Deoxyribose operon repressor CRN29_06385 SM01134 CRN29_06385 CRN29_06390 SM00448 cheY-homologous receiver domain CRN29_06390 SM00862 Transcriptional regulatory protein, C terminal CRN29_06395 SM00387 Histidine kinase-like ATPases CRN29_06395 SM00388 His Kinase A (phosphoacceptor) domain CRN29_06405 SM00861 Transketolase, pyrimidine binding domain CRN29_06420 SM00382 ATPases associated with a variety of cellular activities CRN29_06445 SM00382 ATPases associated with a variety of cellular activities CRN29_06450 SM00327 von Willebrand factor (vWF) type A domain CRN29_06480 SM00357 Cold shock protein domain CRN29_06495 SM01005 Alanine racemase, C-terminal domain CRN29_06515 SM01130 CRN29_06515 CRN29_06520 SM00859 Semialdehyde dehydrogenase, NAD binding domain CRN29_06530 SM00382 ATPases associated with a variety of cellular activities CRN29_06555 SM00382 ATPases associated with a variety of cellular activities CRN29_06585 SM00382 ATPases associated with a variety of cellular activities CRN29_06590 SM00382 ATPases associated with a variety of cellular activities CRN29_06690 SM01061 CAT RNA binding domain CRN29_06700 SM00434 DNA Topoisomerase IV CRN29_06705 SM00387 Histidine kinase-like ATPases CRN29_06705 SM00433 TopoisomeraseII CRN29_06710 SM01207 CRN29_06710 CRN29_06760 SM00861 Transketolase, pyrimidine binding domain CRN29_06785 SM01240 CRN29_06785 CRN29_06800 SM01060 CRN29_06800 CRN29_06850 SM00318 Staphylococcal nuclease homologues CRN29_06865 SM00421 helix_turn_helix, Lux Regulon CRN29_06865 SM00448 cheY-homologous receiver domain CRN29_06870 SM00387 Histidine kinase-like ATPases CRN29_06880 SM00382 ATPases associated with a variety of cellular activities CRN29_06885 SM00155 Phospholipase D. Active site motifs. CRN29_06925 SM01230 CRN29_06925 CRN29_06930 SM00422 helix_turn_helix, mercury resistance CRN29_06985 SM00853 MutL C terminal dimerisation domain CRN29_06985 SM01340 CRN29_06985 CRN29_06990 SM00533 DNA-binding domain of DNA mismatch repair MUTS family CRN29_06990 SM00534 ATPase domain of DNA mismatch repair MUTS family CRN29_07005 SM00729 Elongator protein 3, MiaB family, Radical SAM CRN29_07040 SM00322 K homology RNA-binding domain CRN29_07040 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CRN29_07045 SM00382 ATPases associated with a variety of cellular activities CRN29_07050 SM00852 Probable molybdopterin binding domain CRN29_07060 SM00530 Helix-turn-helix XRE-family like proteins CRN29_07085 SM00866 CRN29_07085 CRN29_07090 SM00382 ATPases associated with a variety of cellular activities CRN29_07090 SM00843 CRN29_07090 CRN29_07095 SM00849 Metallo-beta-lactamase superfamily CRN29_07100 SM00316 Ribosomal protein S1-like RNA-binding domain CRN29_07100 SM00322 K homology RNA-binding domain CRN29_07105 SM01387 CRN29_07105 CRN29_07110 SM00904 Riboflavin kinase CRN29_07140 SM00316 Ribosomal protein S1-like RNA-binding domain CRN29_07140 SM00322 K homology RNA-binding domain CRN29_07150 SM00479 CRN29_07150 CRN29_07150 SM00481 DNA polymerase alpha chain like domain CRN29_07160 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CRN29_07200 SM00382 ATPases associated with a variety of cellular activities CRN29_07200 SM01086 C-terminal, D2-small domain, of ClpB protein CRN29_07220 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain CRN29_07220 SM00437 Bacterial DNA topoisomerase I DNA-binding domain CRN29_07220 SM00493 CRN29_07220 CRN29_07230 SM00881 CoA binding domain CRN29_07290 SM00382 ATPases associated with a variety of cellular activities CRN29_07290 SM00962 SRP54-type protein, GTPase domain CRN29_07290 SM00963 SRP54-type protein, helical bundle domain CRN29_07300 SM00382 ATPases associated with a variety of cellular activities CRN29_07300 SM00962 SRP54-type protein, GTPase domain CRN29_07300 SM00963 SRP54-type protein, helical bundle domain CRN29_07305 SM00968 SMC proteins Flexible Hinge Domain CRN29_07310 SM00358 Double-stranded RNA binding motif CRN29_07310 SM00535 Ribonuclease III family CRN29_07320 SM00822 CRN29_07320 CRN29_07325 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. CRN29_07340 SM00487 DEAD-like helicases superfamily CRN29_07340 SM00490 helicase superfamily c-terminal domain CRN29_07345 SM00318 Staphylococcal nuclease homologues CRN29_07345 SM00894 Excalibur calcium-binding domain CRN29_07350 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CRN29_07355 SM01120 CRN29_07355 CRN29_07355 SM01121 CRN29_07355 CRN29_07370 SM00983 Thiamin pyrophosphokinase, vitamin B1 binding domain CRN29_07390 SM00220 Serine/Threonine protein kinases, catalytic domain CRN29_07390 SM00740 CRN29_07390 CRN29_07395 SM00331 Sigma factor PP2C-like phosphatases CRN29_07395 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain CRN29_07425 SM00487 DEAD-like helicases superfamily CRN29_07425 SM00490 helicase superfamily c-terminal domain CRN29_07435 SM01409 CRN29_07435 CRN29_07440 SM00072 Guanylate kinase homologues. CRN29_07465 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family CRN29_07470 SM00851 MGS-like domain CRN29_07470 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CRN29_07470 SM01209 CRN29_07470 CRN29_07475 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain CRN29_07500 SM00363 S4 RNA-binding domain CRN29_07525 SM00363 S4 RNA-binding domain CRN29_07550 SM00864 Tubulin/FtsZ family, GTPase domain CRN29_07550 SM00865 Tubulin/FtsZ family, C-terminal domain CRN29_07555 SM00842 Cell division protein FtsA CRN29_07575 SM00740 CRN29_07575 CRN29_07675 SM00465 GIY-YIG type nucleases (URI domain) CRN29_07685 SM00463 Small MutS-related domain CRN29_07685 SM00533 DNA-binding domain of DNA mismatch repair MUTS family CRN29_07685 SM00534 ATPase domain of DNA mismatch repair MUTS family CRN29_07690 SM00278 Helix-hairpin-helix DNA-binding motif class 1 CRN29_07690 SM00481 DNA polymerase alpha chain like domain CRN29_07690 SM00483 DNA polymerase X family CRN29_07710 SM00873 B3/4 domain CRN29_07710 SM00874 tRNA synthetase B5 domain CRN29_07710 SM00896 Ferredoxin-fold anticodon binding domain CRN29_07720 SM00967 RNA 2'-O ribose methyltransferase substrate binding CRN29_07735 SM00382 ATPases associated with a variety of cellular activities CRN29_07750 SM00725 NEAr Transporter domain CRN29_07755 SM00725 NEAr Transporter domain CRN29_07765 SM00725 NEAr Transporter domain CRN29_07770 SM00725 NEAr Transporter domain CRN29_07845 SM00878 Biotin carboxylase C-terminal domain CRN29_07870 SM00838 Elongation factor G C-terminus CRN29_07920 SM00382 ATPases associated with a variety of cellular activities CRN29_07925 SM00530 Helix-turn-helix XRE-family like proteins CRN29_07945 SM00861 Transketolase, pyrimidine binding domain CRN29_07970 SM00849 Metallo-beta-lactamase superfamily CRN29_08035 SM00382 ATPases associated with a variety of cellular activities CRN29_08045 SM01209 CRN29_08045 CRN29_08045 SM01210 CRN29_08045 CRN29_08050 SM00798 AICARFT/IMPCHase bienzyme CRN29_08050 SM00851 MGS-like domain CRN29_08075 SM01211 CRN29_08075 CRN29_08095 SM01001 AIR carboxylase CRN29_08165 SM00047 Lysozyme subfamily 2 CRN29_08165 SM00644 CRN29_08165 CRN29_08170 SM00347 helix_turn_helix multiple antibiotic resistance protein CRN29_08215 SM00862 Transcriptional regulatory protein, C terminal CRN29_08220 SM01260 CRN29_08220 CRN29_08285 SM00914 CRN29_08285 CRN29_08315 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CRN29_08375 SM00116 Domain in cystathionine beta-synthase and other proteins. CRN29_08375 SM00924 MgtE intracellular N domain CRN29_08390 SM00954 Region found in RelA / SpoT proteins CRN29_08400 SM01118 CRN29_08400 CRN29_08450 SM00382 ATPases associated with a variety of cellular activities CRN29_08455 SM00382 ATPases associated with a variety of cellular activities CRN29_08465 SM00825 Beta-ketoacyl synthase CRN29_08485 SM00382 ATPases associated with a variety of cellular activities CRN29_08485 SM01086 C-terminal, D2-small domain, of ClpB protein CRN29_08565 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CRN29_08580 SM00316 Ribosomal protein S1-like RNA-binding domain CRN29_08590 SM01298 CRN29_08590 CRN29_08730 SM00729 Elongator protein 3, MiaB family, Radical SAM CRN29_08780 SM00382 ATPases associated with a variety of cellular activities CRN29_08810 SM00382 ATPases associated with a variety of cellular activities CRN29_08810 SM00930 CRN29_08810 CRN29_08820 SM00493 CRN29_08820 CRN29_08865 SM00855 Phosphoglycerate mutase family CRN29_08925 SM00357 Cold shock protein domain CRN29_08955 SM00316 Ribosomal protein S1-like RNA-binding domain CRN29_08955 SM00357 Cold shock protein domain CRN29_08955 SM00955 CRN29_08955 CRN29_08975 SM01192 CRN29_08975 CRN29_08975 SM01193 CRN29_08975 CRN29_08995 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CRN29_09055 SM00028 Tetratricopeptide repeats CRN29_09080 SM00487 DEAD-like helicases superfamily CRN29_09080 SM00490 helicase superfamily c-terminal domain CRN29_09095 SM00257 Lysin motif CRN29_09105 SM00957 SecA DEAD-like domain CRN29_09105 SM00958 SecA preprotein cross-linking domain CRN29_09110 SM00644 CRN29_09110 CRN29_09125 SM00487 DEAD-like helicases superfamily CRN29_09125 SM00490 helicase superfamily c-terminal domain CRN29_09145 SM00267 diguanylate cyclase CRN29_09225 SM00046 Diacylglycerol kinase catalytic domain (presumed) CRN29_09245 SM00382 ATPases associated with a variety of cellular activities CRN29_09250 SM00341 Helicase and RNase D C-terminal CRN29_09250 SM00487 DEAD-like helicases superfamily CRN29_09250 SM00490 helicase superfamily c-terminal domain CRN29_09250 SM00956 CRN29_09250 CRN29_09255 SM00382 ATPases associated with a variety of cellular activities CRN29_09270 SM00797 Allophanate hydrolase subunit 2 CRN29_09275 SM00796 Allophanate hydrolase subunit 1 CRN29_09330 SM00448 cheY-homologous receiver domain CRN29_09330 SM00862 Transcriptional regulatory protein, C terminal CRN29_09335 SM00387 Histidine kinase-like ATPases CRN29_09335 SM00388 His Kinase A (phosphoacceptor) domain CRN29_09350 SM01091 Transporter associated domain CRN29_09370 SM00420 helix_turn_helix, Deoxyribose operon repressor CRN29_09370 SM01134 CRN29_09370 CRN29_09420 SM00833 Cobalamin synthesis protein cobW C-terminal domain CRN29_09425 SM00347 helix_turn_helix multiple antibiotic resistance protein CRN29_09430 SM00382 ATPases associated with a variety of cellular activities CRN29_09435 SM00382 ATPases associated with a variety of cellular activities CRN29_09520 SM00342 helix_turn_helix, arabinose operon control protein CRN29_09530 SM00257 Lysin motif CRN29_09550 SM00382 ATPases associated with a variety of cellular activities CRN29_09555 SM00387 Histidine kinase-like ATPases CRN29_09560 SM00448 cheY-homologous receiver domain CRN29_09560 SM00862 Transcriptional regulatory protein, C terminal CRN29_09595 SM01120 CRN29_09595 CRN29_09615 SM00382 ATPases associated with a variety of cellular activities CRN29_09630 SM00382 ATPases associated with a variety of cellular activities CRN29_09655 SM00382 ATPases associated with a variety of cellular activities CRN29_09680 SM00529 Helix-turn-helix diphteria tox regulatory element CRN29_09680 SM00899 CRN29_09680 CRN29_09685 SM00382 ATPases associated with a variety of cellular activities CRN29_09765 SM00347 helix_turn_helix multiple antibiotic resistance protein CRN29_09810 SM00422 helix_turn_helix, mercury resistance CRN29_09815 SM00478 endonuclease III CRN29_09820 SM00836 DALR anticodon binding domain CRN29_09820 SM01016 Arginyl tRNA synthetase N terminal dom CRN29_09850 SM01001 AIR carboxylase CRN29_09870 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CRN29_09960 SM00986 Uracil DNA glycosylase superfamily CRN29_09960 SM00987 UreE urease accessory protein, C-terminal domain CRN29_10020 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family CRN29_10155 SM00838 Elongation factor G C-terminus CRN29_10155 SM00889 Elongation factor G, domain IV CRN29_10175 SM00663 RNA polymerase I subunit A N-terminus CRN29_10210 SM00649 Ribosomal protein L11/L12 CRN29_10215 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. CRN29_10215 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. CRN29_10240 SM00967 RNA 2'-O ribose methyltransferase substrate binding CRN29_10245 SM00535 Ribonuclease III family CRN29_10250 SM00840 CRN29_10250 CRN29_10265 SM00670 Large family of predicted nucleotide-binding domains CRN29_10270 SM00382 ATPases associated with a variety of cellular activities CRN29_10275 SM00382 ATPases associated with a variety of cellular activities CRN29_10275 SM01086 C-terminal, D2-small domain, of ClpB protein CRN29_10310 SM00345 helix_turn_helix gluconate operon transcriptional repressor CRN29_10405 SM00905 Dihydroneopterin aldolase CRN29_10425 SM00382 ATPases associated with a variety of cellular activities CRN29_10435 SM00977 TilS substrate C-terminal domain CRN29_10440 SM00316 Ribosomal protein S1-like RNA-binding domain CRN29_10450 SM00363 S4 RNA-binding domain CRN29_10465 SM00487 DEAD-like helicases superfamily CRN29_10465 SM00490 helicase superfamily c-terminal domain CRN29_10465 SM00982 CRN29_10465 CRN29_10465 SM01058 CarD-like/TRCF domain CRN29_10480 SM01400 CRN29_10480 CRN29_10515 SM00650 Ribosomal RNA adenine dimethylases CRN29_10520 SM00493 CRN29_10520 CRN29_10540 SM00465 GIY-YIG type nucleases (URI domain) CRN29_10600 SM00278 Helix-hairpin-helix DNA-binding motif class 1 CRN29_10600 SM00493 CRN29_10600 CRN29_10610 SM00382 ATPases associated with a variety of cellular activities CRN29_10675 SM00257 Lysin motif CRN29_10725 SM00014 Acid phosphatase homologues CRN29_10775 SM00833 Cobalamin synthesis protein cobW C-terminal domain CRN29_10830 SM00116 Domain in cystathionine beta-synthase and other proteins. CRN29_10830 SM01240 CRN29_10830 CRN29_10895 SM00855 Phosphoglycerate mutase family CRN29_11025 SM00470 ParB-like nuclease domain CRN29_11060 SM00882 Coenzyme A transferase CRN29_11065 SM00882 Coenzyme A transferase CRN29_11090 SM00530 Helix-turn-helix XRE-family like proteins CRN29_11100 SM00382 ATPases associated with a variety of cellular activities CRN29_11145 SM00382 ATPases associated with a variety of cellular activities CRN29_11190 SM00382 ATPases associated with a variety of cellular activities CRN29_11240 SM00470 ParB-like nuclease domain CRN29_11250 SM01228 CRN29_11250 CRN29_11270 SM00382 ATPases associated with a variety of cellular activities CRN29_11270 SM00760 Bacterial dnaA protein helix-turn-helix domain CRN29_11275 SM00480 DNA polymerase III beta subunit CRN29_11290 SM00387 Histidine kinase-like ATPases CRN29_11290 SM00433 TopoisomeraseII CRN29_11295 SM00434 DNA Topoisomerase IV CRN29_11345 SM00267 diguanylate cyclase CRN29_11360 SM00788 Adenylosuccinate synthetase CRN29_11375 SM00448 cheY-homologous receiver domain CRN29_11375 SM00862 Transcriptional regulatory protein, C terminal CRN29_11380 SM00091 PAS domain CRN29_11380 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CRN29_11380 SM00387 Histidine kinase-like ATPases CRN29_11380 SM00388 His Kinase A (phosphoacceptor) domain CRN29_11395 SM00849 Metallo-beta-lactamase superfamily CRN29_11450 SM00642 Alpha-amylase domain CRN29_11455 SM00345 helix_turn_helix gluconate operon transcriptional repressor CRN29_11455 SM00866 CRN29_11455 CRN29_11520 SM00857 Resolvase, N terminal domain CRN29_11550 SM00226 Low molecular weight phosphatase family CRN29_11560 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CRN29_11590 SM00382 ATPases associated with a variety of cellular activities CRN29_11620 SM00245 tail specific protease CRN29_11625 SM00448 cheY-homologous receiver domain CRN29_11625 SM00862 Transcriptional regulatory protein, C terminal CRN29_11630 SM00387 Histidine kinase-like ATPases CRN29_11630 SM00388 His Kinase A (phosphoacceptor) domain CRN29_11715 SM00849 Metallo-beta-lactamase superfamily CRN29_11725 SM00422 helix_turn_helix, mercury resistance CRN29_11740 SM00729 Elongator protein 3, MiaB family, Radical SAM CRN29_11740 SM00876 Biotin and Thiamin Synthesis associated domain CRN29_11810 SM00347 helix_turn_helix multiple antibiotic resistance protein CRN29_11895 SM00857 Resolvase, N terminal domain CRN29_11900 SM00857 Resolvase, N terminal domain CRN29_12035 SM00957 SecA DEAD-like domain CRN29_12035 SM00958 SecA preprotein cross-linking domain CRN29_12055 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CRN29_12060 SM00857 Resolvase, N terminal domain CRN29_12065 SM00857 Resolvase, N terminal domain