locus-tag	class	description
StAP1_014	COG1388	LysM domain
StAP1_014	COG5632	N-Acetylmuramoyl-L-alanine amidase
StAP1_017	COG1388	LysM domain
StAP1_105	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
StAP1_162	COG0468	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
StAP1_166	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
StAP1_166	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
StAP1_171	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
StAP1_172	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
StAP1_173	COG1780	Probably involved in ribonucleotide reductase function
StAP1_179	COG0419	ATPase involved in DNA repair
StAP1_181	COG0420	3'-5' exonuclease activity
StAP1_183	COG1066	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
StAP1_185	COG1201	RNA secondary structure unwinding
StAP1_197	COG0584	glycerophosphoryl diester phosphodiesterase
StAP1_199	COG1705	Flagellar rod assembly protein muramidase FlgJ
StAP1_199	COG3942	CHAP domain