CEP89_00010 SM00028 Tetratricopeptide repeats CEP89_00040 SM00382 ATPases associated with a variety of cellular activities CEP89_00055 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CEP89_00055 SM00954 Region found in RelA / SpoT proteins CEP89_00065 SM00981 CEP89_00065 CEP89_00085 SM00382 ATPases associated with a variety of cellular activities CEP89_00165 SM01091 Transporter associated domain CEP89_00195 SM00411 bacterial (prokaryotic) histone like domain CEP89_00235 SM00729 Elongator protein 3, MiaB family, Radical SAM CEP89_00260 SM00358 Double-stranded RNA binding motif CEP89_00260 SM00535 Ribonuclease III family CEP89_00270 SM00382 ATPases associated with a variety of cellular activities CEP89_00325 SM00382 ATPases associated with a variety of cellular activities CEP89_00325 SM00994 ClpX C4-type zinc finger CEP89_00325 SM01086 C-terminal, D2-small domain, of ClpB protein CEP89_00330 SM00382 ATPases associated with a variety of cellular activities CEP89_00330 SM00464 Found in ATP-dependent protease La (LON) CEP89_00335 SM00904 Riboflavin kinase CEP89_00375 SM00838 Elongation factor G C-terminus CEP89_00380 SM00479 CEP89_00380 CEP89_00390 SM01230 CEP89_00390 CEP89_00425 SM00363 S4 RNA-binding domain CEP89_00440 SM00382 ATPases associated with a variety of cellular activities CEP89_00450 SM00382 ATPases associated with a variety of cellular activities CEP89_00460 SM00448 cheY-homologous receiver domain CEP89_00460 SM00862 Transcriptional regulatory protein, C terminal CEP89_00465 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CEP89_00465 SM00387 Histidine kinase-like ATPases CEP89_00465 SM00388 His Kinase A (phosphoacceptor) domain CEP89_00510 SM00244 prohibitin homologues CEP89_00525 SM00116 Domain in cystathionine beta-synthase and other proteins. CEP89_00525 SM00924 MgtE intracellular N domain CEP89_00535 SM00382 ATPases associated with a variety of cellular activities CEP89_00570 SM00478 endonuclease III CEP89_00575 SM01323 CEP89_00575 CEP89_00580 SM00646 CEP89_00580 CEP89_00590 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CEP89_00595 SM00955 CEP89_00595 CEP89_00620 SM00487 DEAD-like helicases superfamily CEP89_00620 SM00490 helicase superfamily c-terminal domain CEP89_00635 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CEP89_00635 SM00245 tail specific protease CEP89_00640 SM00363 S4 RNA-binding domain CEP89_00650 SM01103 CEP89_00650 CEP89_00675 SM00382 ATPases associated with a variety of cellular activities CEP89_00760 SM00382 ATPases associated with a variety of cellular activities CEP89_00775 SM00382 ATPases associated with a variety of cellular activities CEP89_00780 SM00382 ATPases associated with a variety of cellular activities CEP89_00810 SM00354 helix_turn _helix lactose operon repressor CEP89_00845 SM00487 DEAD-like helicases superfamily CEP89_00845 SM00490 helicase superfamily c-terminal domain CEP89_00860 SM00487 DEAD-like helicases superfamily CEP89_00900 SM01252 CEP89_00900 CEP89_00965 SM00278 Helix-hairpin-helix DNA-binding motif class 1 CEP89_00985 SM00840 CEP89_00985 CEP89_00990 SM00463 Small MutS-related domain CEP89_00990 SM00533 DNA-binding domain of DNA mismatch repair MUTS family CEP89_00990 SM00534 ATPase domain of DNA mismatch repair MUTS family CEP89_01000 SM00382 ATPases associated with a variety of cellular activities CEP89_01005 SM00977 TilS substrate C-terminal domain CEP89_01035 SM00382 ATPases associated with a variety of cellular activities CEP89_01035 SM00930 CEP89_01035 CEP89_01045 SM00957 SecA DEAD-like domain CEP89_01045 SM00958 SecA preprotein cross-linking domain CEP89_01085 SM00937 CEP89_01085 CEP89_01115 SM00220 Serine/Threonine protein kinases, catalytic domain CEP89_01170 SM00382 ATPases associated with a variety of cellular activities CEP89_01175 SM00062 Bacterial periplasmic substrate-binding proteins CEP89_01240 SM00530 Helix-turn-helix XRE-family like proteins CEP89_01270 SM00480 DNA polymerase III beta subunit CEP89_01285 SM01207 CEP89_01285 CEP89_01295 SM00382 ATPases associated with a variety of cellular activities CEP89_01320 SM00346 helix_turn_helix isocitrate lyase regulation CEP89_01365 SM00382 ATPases associated with a variety of cellular activities CEP89_01370 SM00829 Enoylreductase CEP89_01510 SM01387 CEP89_01510 CEP89_01515 SM01131 CEP89_01515 CEP89_01520 SM00014 Acid phosphatase homologues CEP89_01530 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CEP89_01535 SM00487 DEAD-like helicases superfamily CEP89_01535 SM00488 CEP89_01535 CEP89_01535 SM00491 CEP89_01535 CEP89_01570 SM00649 Ribosomal protein L11/L12 CEP89_01575 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. CEP89_01595 SM00493 CEP89_01595 CEP89_01615 SM00650 Ribosomal RNA adenine dimethylases CEP89_01635 SM01133 CEP89_01635 CEP89_01640 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain CEP89_01660 SM00382 ATPases associated with a variety of cellular activities CEP89_01665 SM00465 GIY-YIG type nucleases (URI domain) CEP89_01680 SM00478 endonuclease III CEP89_01745 SM00400 zinc finger CEP89_01745 SM00493 CEP89_01745 CEP89_01750 SM01409 CEP89_01750 CEP89_01755 SM00072 Guanylate kinase homologues. CEP89_01760 SM00663 RNA polymerase I subunit A N-terminus CEP89_01800 SM00382 ATPases associated with a variety of cellular activities CEP89_01865 SM00382 ATPases associated with a variety of cellular activities CEP89_01870 SM00382 ATPases associated with a variety of cellular activities CEP89_01895 SM00382 ATPases associated with a variety of cellular activities CEP89_01920 SM00382 ATPases associated with a variety of cellular activities CEP89_01925 SM00530 Helix-turn-helix XRE-family like proteins CEP89_01940 SM00530 Helix-turn-helix XRE-family like proteins CEP89_01960 SM00245 tail specific protease CEP89_01965 SM00849 Metallo-beta-lactamase superfamily CEP89_01990 SM00849 Metallo-beta-lactamase superfamily CEP89_02005 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain CEP89_02005 SM00437 Bacterial DNA topoisomerase I DNA-binding domain CEP89_02005 SM00493 CEP89_02005 CEP89_02015 SM00028 Tetratricopeptide repeats CEP89_02050 SM00382 ATPases associated with a variety of cellular activities CEP89_02075 SM00382 ATPases associated with a variety of cellular activities CEP89_02095 SM00642 Alpha-amylase domain CEP89_02105 SM00354 helix_turn _helix lactose operon repressor CEP89_02110 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain CEP89_02115 SM00732 Likely ribonuclease with RNase H fold. CEP89_02130 SM00493 CEP89_02130 CEP89_02200 SM00831 Cation transporter/ATPase, N-terminus CEP89_02210 SM00316 Ribosomal protein S1-like RNA-binding domain CEP89_02210 SM00322 K homology RNA-binding domain CEP89_02240 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain CEP89_02250 SM00028 Tetratricopeptide repeats CEP89_02275 SM00382 ATPases associated with a variety of cellular activities CEP89_02320 SM01091 Transporter associated domain CEP89_02330 SM00881 CoA binding domain CEP89_02345 SM00487 DEAD-like helicases superfamily CEP89_02345 SM00490 helicase superfamily c-terminal domain CEP89_02355 SM00845 GatB domain CEP89_02375 SM00345 helix_turn_helix gluconate operon transcriptional repressor CEP89_02380 SM00382 ATPases associated with a variety of cellular activities CEP89_02435 SM00479 CEP89_02435 CEP89_02440 SM00382 ATPases associated with a variety of cellular activities CEP89_02455 SM00967 RNA 2'-O ribose methyltransferase substrate binding CEP89_02460 SM00342 helix_turn_helix, arabinose operon control protein CEP89_02490 SM00662 RNA polymerases D CEP89_02495 SM00363 S4 RNA-binding domain CEP89_02495 SM01390 CEP89_02495 CEP89_02515 SM00316 Ribosomal protein S1-like RNA-binding domain CEP89_02530 SM00836 DALR anticodon binding domain CEP89_02530 SM01016 Arginyl tRNA synthetase N terminal dom CEP89_02535 SM00479 CEP89_02535 CEP89_02535 SM00481 DNA polymerase alpha chain like domain CEP89_02540 SM00998 Adenylosuccinate lyase C-terminus CEP89_02545 SM00788 Adenylosuccinate synthetase CEP89_02605 SM00382 ATPases associated with a variety of cellular activities CEP89_02665 SM00382 ATPases associated with a variety of cellular activities CEP89_02695 SM00890 Domain of unknown function CEP89_02785 SM00912 haemagglutination activity domain CEP89_02800 SM00382 ATPases associated with a variety of cellular activities CEP89_02815 SM00382 ATPases associated with a variety of cellular activities CEP89_02905 SM00382 ATPases associated with a variety of cellular activities CEP89_02920 SM00382 ATPases associated with a variety of cellular activities CEP89_03155 SM00382 ATPases associated with a variety of cellular activities CEP89_03175 SM00028 Tetratricopeptide repeats CEP89_03180 SM01321 CEP89_03180 CEP89_03235 SM00382 ATPases associated with a variety of cellular activities CEP89_03250 SM00869 Autotransporter beta-domain CEP89_03310 SM01403 CEP89_03310 CEP89_03320 SM00838 Elongation factor G C-terminus CEP89_03320 SM00889 Elongation factor G, domain IV CEP89_03450 SM00448 cheY-homologous receiver domain CEP89_03530 SM00420 helix_turn_helix, Deoxyribose operon repressor CEP89_03535 SM01133 CEP89_03535 CEP89_03550 SM00382 ATPases associated with a variety of cellular activities CEP89_03575 SM00873 B3/4 domain CEP89_03630 SM00382 ATPases associated with a variety of cellular activities CEP89_03660 SM00354 helix_turn _helix lactose operon repressor CEP89_03690 SM00420 helix_turn_helix, Deoxyribose operon repressor CEP89_03690 SM01134 CEP89_03690 CEP89_03740 SM00864 Tubulin/FtsZ family, GTPase domain CEP89_03740 SM00865 Tubulin/FtsZ family, C-terminal domain CEP89_03755 SM00393 Putative single-stranded nucleic acids-binding domain CEP89_03765 SM01234 CEP89_03765 CEP89_03905 SM00382 ATPases associated with a variety of cellular activities CEP89_03915 SM00382 ATPases associated with a variety of cellular activities CEP89_03920 SM00382 ATPases associated with a variety of cellular activities CEP89_03960 SM00642 Alpha-amylase domain CEP89_03975 SM01209 CEP89_03975 CEP89_03975 SM01210 CEP89_03975 CEP89_03980 SM00798 AICARFT/IMPCHase bienzyme CEP89_03980 SM00851 MGS-like domain CEP89_04010 SM01001 AIR carboxylase CEP89_04015 SM01211 CEP89_04015 CEP89_04025 SM00487 DEAD-like helicases superfamily CEP89_04025 SM00490 helicase superfamily c-terminal domain CEP89_04025 SM00982 CEP89_04025 CEP89_04025 SM01058 CarD-like/TRCF domain CEP89_04120 SM00382 ATPases associated with a variety of cellular activities CEP89_04125 SM00641 Glycosyl hydrolases family 25 CEP89_04150 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CEP89_04160 SM00382 ATPases associated with a variety of cellular activities CEP89_04195 SM00533 DNA-binding domain of DNA mismatch repair MUTS family CEP89_04195 SM00534 ATPase domain of DNA mismatch repair MUTS family CEP89_04205 SM00912 haemagglutination activity domain CEP89_04230 SM00382 ATPases associated with a variety of cellular activities CEP89_04230 SM00760 Bacterial dnaA protein helix-turn-helix domain CEP89_04285 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CEP89_04285 SM00387 Histidine kinase-like ATPases CEP89_04285 SM00388 His Kinase A (phosphoacceptor) domain CEP89_04290 SM00448 cheY-homologous receiver domain CEP89_04290 SM00862 Transcriptional regulatory protein, C terminal CEP89_04365 SM00481 DNA polymerase alpha chain like domain CEP89_04390 SM00382 ATPases associated with a variety of cellular activities CEP89_04395 SM00382 ATPases associated with a variety of cellular activities CEP89_04470 SM00382 ATPases associated with a variety of cellular activities CEP89_04470 SM00962 SRP54-type protein, GTPase domain CEP89_04470 SM00963 SRP54-type protein, helical bundle domain CEP89_04475 SM00563 Phosphate acyltransferases CEP89_04480 SM00563 Phosphate acyltransferases CEP89_04510 SM00382 ATPases associated with a variety of cellular activities CEP89_04525 SM01400 CEP89_04525 CEP89_04590 SM01120 CEP89_04590 CEP89_04590 SM01121 CEP89_04590 CEP89_04595 SM00316 Ribosomal protein S1-like RNA-binding domain CEP89_04625 SM00331 Sigma factor PP2C-like phosphatases CEP89_04655 SM00487 DEAD-like helicases superfamily CEP89_04680 SM00155 Phospholipase D. Active site motifs. CEP89_04705 SM00729 Elongator protein 3, MiaB family, Radical SAM CEP89_04745 SM00382 ATPases associated with a variety of cellular activities CEP89_04750 SM00382 ATPases associated with a variety of cellular activities CEP89_04770 SM00642 Alpha-amylase domain CEP89_04795 SM00382 ATPases associated with a variety of cellular activities CEP89_04810 SM00421 helix_turn_helix, Lux Regulon CEP89_04810 SM00448 cheY-homologous receiver domain CEP89_04825 SM00861 Transketolase, pyrimidine binding domain CEP89_04870 SM00855 Phosphoglycerate mutase family CEP89_04875 SM00382 ATPases associated with a variety of cellular activities CEP89_04875 SM00843 CEP89_04875 CEP89_04890 SM00363 S4 RNA-binding domain CEP89_04915 SM00382 ATPases associated with a variety of cellular activities CEP89_04915 SM01086 C-terminal, D2-small domain, of ClpB protein CEP89_04940 SM00271 DnaJ molecular chaperone homology domain CEP89_04950 SM01061 CAT RNA binding domain CEP89_05010 SM00642 Alpha-amylase domain CEP89_05045 SM00642 Alpha-amylase domain CEP89_05070 SM00345 helix_turn_helix gluconate operon transcriptional repressor CEP89_05070 SM00866 CEP89_05070 CEP89_05145 SM01007 Class II Aldolase and Adducin N-terminal domain CEP89_05150 SM00530 Helix-turn-helix XRE-family like proteins CEP89_05210 SM00354 helix_turn _helix lactose operon repressor CEP89_05230 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CEP89_05350 SM01382 CEP89_05350 CEP89_05350 SM01383 CEP89_05350 CEP89_05365 SM00322 K homology RNA-binding domain CEP89_05385 SM01374 CEP89_05385 CEP89_05440 SM00363 S4 RNA-binding domain CEP89_05450 SM00363 S4 RNA-binding domain CEP89_05460 SM00387 Histidine kinase-like ATPases CEP89_05460 SM00433 TopoisomeraseII CEP89_05465 SM00434 DNA Topoisomerase IV CEP89_05490 SM00873 B3/4 domain CEP89_05490 SM00874 tRNA synthetase B5 domain CEP89_05490 SM00896 Ferredoxin-fold anticodon binding domain CEP89_05495 SM00983 Thiamin pyrophosphokinase, vitamin B1 binding domain CEP89_05620 SM00244 prohibitin homologues CEP89_05640 SM00382 ATPases associated with a variety of cellular activities CEP89_05645 SM00382 ATPases associated with a variety of cellular activities CEP89_05670 SM00861 Transketolase, pyrimidine binding domain CEP89_05705 SM00862 Transcriptional regulatory protein, C terminal CEP89_05725 SM00347 helix_turn_helix multiple antibiotic resistance protein CEP89_05740 SM00740 CEP89_05740 CEP89_05800 SM00530 Helix-turn-helix XRE-family like proteins CEP89_05820 SM01040 BRO family, N-terminal domain CEP89_06005 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain CEP89_06005 SM00437 Bacterial DNA topoisomerase I DNA-binding domain CEP89_06005 SM00493 CEP89_06005 CEP89_06040 SM00912 haemagglutination activity domain CEP89_06095 SM00861 Transketolase, pyrimidine binding domain CEP89_06100 SM00382 ATPases associated with a variety of cellular activities CEP89_06115 SM00382 ATPases associated with a variety of cellular activities CEP89_06155 SM00382 ATPases associated with a variety of cellular activities CEP89_06190 SM01228 CEP89_06190 CEP89_06245 SM00382 ATPases associated with a variety of cellular activities CEP89_06260 SM00487 DEAD-like helicases superfamily CEP89_06260 SM00490 helicase superfamily c-terminal domain CEP89_06310 SM00729 Elongator protein 3, MiaB family, Radical SAM CEP89_06320 SM00382 ATPases associated with a variety of cellular activities CEP89_06325 SM00382 ATPases associated with a variety of cellular activities CEP89_06335 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs CEP89_06335 SM00475 5'-3' exonuclease CEP89_06335 SM00482 DNA polymerase A domain CEP89_06350 SM00363 S4 RNA-binding domain CEP89_06365 SM00316 Ribosomal protein S1-like RNA-binding domain CEP89_06365 SM00732 Likely ribonuclease with RNase H fold. CEP89_06395 SM00382 ATPases associated with a variety of cellular activities CEP89_06545 SM00855 Phosphoglycerate mutase family CEP89_06605 SM01130 CEP89_06605 CEP89_06635 SM00853 MutL C terminal dimerisation domain CEP89_06635 SM01340 CEP89_06635 CEP89_06715 SM00382 ATPases associated with a variety of cellular activities CEP89_06795 SM00838 Elongation factor G C-terminus CEP89_06795 SM00889 Elongation factor G, domain IV CEP89_06865 SM01130 CEP89_06865 CEP89_06875 SM00859 Semialdehyde dehydrogenase, NAD binding domain CEP89_06880 SM00841 Elongation factor P, C-terminal CEP89_06880 SM01185 CEP89_06880 CEP89_06885 SM00476 deoxyribonuclease I CEP89_06895 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CEP89_06925 SM00028 Tetratricopeptide repeats CEP89_06985 SM00382 ATPases associated with a variety of cellular activities CEP89_07020 SM01192 CEP89_07020 CEP89_07020 SM01193 CEP89_07020 CEP89_07100 SM01228 CEP89_07100 CEP89_07105 SM00849 Metallo-beta-lactamase superfamily CEP89_07115 SM00116 Domain in cystathionine beta-synthase and other proteins. CEP89_07115 SM01240 CEP89_07115 CEP89_07120 SM00278 Helix-hairpin-helix DNA-binding motif class 1 CEP89_07120 SM00292 breast cancer carboxy-terminal domain CEP89_07120 SM00532 Ligase N family CEP89_07135 SM00382 ATPases associated with a variety of cellular activities CEP89_07140 SM00382 ATPases associated with a variety of cellular activities CEP89_07160 SM00028 Tetratricopeptide repeats CEP89_07175 SM00322 K homology RNA-binding domain CEP89_07175 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CEP89_07190 SM01005 Alanine racemase, C-terminal domain CEP89_07210 SM00363 S4 RNA-binding domain CEP89_07215 SM00357 Cold shock protein domain CEP89_07230 SM00382 ATPases associated with a variety of cellular activities CEP89_07235 SM00382 ATPases associated with a variety of cellular activities CEP89_07250 SM00487 DEAD-like helicases superfamily CEP89_07250 SM00490 helicase superfamily c-terminal domain CEP89_07270 SM00968 SMC proteins Flexible Hinge Domain CEP89_07305 SM00530 Helix-turn-helix XRE-family like proteins CEP89_07310 SM00530 Helix-turn-helix XRE-family like proteins CEP89_07335 SM01040 BRO family, N-terminal domain CEP89_07425 SM00382 ATPases associated with a variety of cellular activities CEP89_07515 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain CEP89_07515 SM00437 Bacterial DNA topoisomerase I DNA-binding domain CEP89_07515 SM00493 CEP89_07515 CEP89_07530 SM00530 Helix-turn-helix XRE-family like proteins CEP89_07615 SM00248 ankyrin repeats CEP89_07640 SM00883 Chaperonin 10 Kd subunit CEP89_07690 SM00382 ATPases associated with a variety of cellular activities