SanJ4211_0001	SM00382	ATPases associated with a variety of cellular activities
SanJ4211_0001	SM00760	Bacterial dnaA protein helix-turn-helix domain
SanJ4211_0002	SM00480	DNA polymerase III beta subunit
SanJ4211_0007	SM00487	DEAD-like helicases superfamily
SanJ4211_0007	SM00490	helicase superfamily c-terminal domain
SanJ4211_0007	SM00982	SanJ4211_0007
SanJ4211_0007	SM01058	CarD-like/TRCF domain
SanJ4211_0008	SM00363	S4 RNA-binding domain
SanJ4211_0012	SM00977	TilS substrate C-terminal domain
SanJ4211_0014	SM00382	ATPases associated with a variety of cellular activities
SanJ4211_0019	SM01400	SanJ4211_0019
SanJ4211_0025	SM01211	SanJ4211_0025
SanJ4211_0029	SM00798	AICARFT/IMPCHase bienzyme
SanJ4211_0029	SM00851	MGS-like domain
SanJ4211_0032	SM01209	SanJ4211_0032
SanJ4211_0032	SM01210	SanJ4211_0032
SanJ4211_0035	SM01001	AIR carboxylase
SanJ4211_0040	SM00998	Adenylosuccinate lyase C-terminus
SanJ4211_0044	SM01120	SanJ4211_0044
SanJ4211_0048c	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SanJ4211_0048c	SM00866	SanJ4211_0048c
SanJ4211_0055	SM01133	SanJ4211_0055
SanJ4211_0057	SM00382	ATPases associated with a variety of cellular activities
SanJ4211_0059	SM00226	Low molecular weight phosphatase family
SanJ4211_0060	SM00698	Possible plasma membrane-binding motif in junctophilins, PIP-5-kinases and protein kinases.
SanJ4211_0070	SM01130	SanJ4211_0070
SanJ4211_0084	SM00382	ATPases associated with a variety of cellular activities
SanJ4211_0090	SM00347	helix_turn_helix multiple antibiotic resistance protein
SanJ4211_0097	SM00347	helix_turn_helix multiple antibiotic resistance protein
SanJ4211_0098	SM00382	ATPases associated with a variety of cellular activities
SanJ4211_0107	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
SanJ4211_0107	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
SanJ4211_0113c	SM00530	Helix-turn-helix XRE-family like proteins 
SanJ4211_0116	SM00530	Helix-turn-helix XRE-family like proteins 
SanJ4211_0160	SM00287	Bacterial SH3 domain homologues
SanJ4211_0177	SM00422	helix_turn_helix, mercury resistance
SanJ4211_0183c	SM00939	X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain
SanJ4211_0183c	SM00940	X-Prolyl dipeptidyl aminopeptidase PepX, N-terminal
SanJ4211_0202	SM00382	ATPases associated with a variety of cellular activities
SanJ4211_0212	SM00663	RNA polymerase I subunit A N-terminus
SanJ4211_0215	SM00422	helix_turn_helix, mercury resistance
SanJ4211_0216	SM01230	SanJ4211_0216
SanJ4211_0218	SM00382	ATPases associated with a variety of cellular activities
SanJ4211_0228	SM00382	ATPases associated with a variety of cellular activities
SanJ4211_0228	SM01086	C-terminal, D2-small domain, of ClpB protein
SanJ4211_0230	SM00861	Transketolase, pyrimidine binding domain
SanJ4211_0232	SM01323	SanJ4211_0232
SanJ4211_0238	SM00530	Helix-turn-helix XRE-family like proteins 
SanJ4211_0239c	SM00889	Elongation factor G, domain IV
SanJ4211_0247c	SM00530	Helix-turn-helix XRE-family like proteins 
SanJ4211_0264	SM00387	Histidine kinase-like ATPases
SanJ4211_0265	SM00421	helix_turn_helix, Lux Regulon
SanJ4211_0265	SM00448	cheY-homologous receiver domain
SanJ4211_0272	SM00883	Chaperonin 10 Kd subunit
SanJ4211_0277	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
SanJ4211_0280c	SM00382	ATPases associated with a variety of cellular activities
SanJ4211_0287	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
SanJ4211_0287	SM00954	Region found in RelA / SpoT proteins
SanJ4211_0289c	SM00529	Helix-turn-helix diphteria tox regulatory element
SanJ4211_0289c	SM00899	SanJ4211_0289c
SanJ4211_0292c	SM00382	ATPases associated with a variety of cellular activities
SanJ4211_0294	SM00382	ATPases associated with a variety of cellular activities
SanJ4211_0295	SM00382	ATPases associated with a variety of cellular activities
SanJ4211_0299	SM00347	helix_turn_helix multiple antibiotic resistance protein
SanJ4211_0303	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
SanJ4211_0304	SM00822	SanJ4211_0304
SanJ4211_0305	SM00825	Beta-ketoacyl synthase
SanJ4211_0308	SM00878	Biotin carboxylase C-terminal domain
SanJ4211_0325	SM00382	ATPases associated with a variety of cellular activities
SanJ4211_0331	SM00322	K homology RNA-binding domain
SanJ4211_0350c	SM00530	Helix-turn-helix XRE-family like proteins 
SanJ4211_0353	SM00740	SanJ4211_0353
SanJ4211_0358	SM00850	LytTr DNA-binding domain
SanJ4211_0362	SM01120	SanJ4211_0362
SanJ4211_0362	SM01121	SanJ4211_0362
SanJ4211_0364	SM00382	ATPases associated with a variety of cellular activities
SanJ4211_0367	SM00421	helix_turn_helix, Lux Regulon
SanJ4211_0367	SM00448	cheY-homologous receiver domain
SanJ4211_0368	SM00244	prohibitin homologues
SanJ4211_0370c	SM00382	ATPases associated with a variety of cellular activities
SanJ4211_0371c	SM00062	Bacterial periplasmic substrate-binding proteins
SanJ4211_0378	SM00382	ATPases associated with a variety of cellular activities
SanJ4211_0382c	SM00936	Penicillin-binding protein 5, C-terminal domain 
SanJ4211_0383	SM00487	DEAD-like helicases superfamily
SanJ4211_0383	SM00490	helicase superfamily c-terminal domain
SanJ4211_0385	SM00382	ATPases associated with a variety of cellular activities
SanJ4211_0397	SM00981	SanJ4211_0397
SanJ4211_0402	SM00322	K homology RNA-binding domain
SanJ4211_0402	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
SanJ4211_0403	SM00072	Guanylate kinase homologues.
SanJ4211_0404	SM01409	SanJ4211_0404
SanJ4211_0405	SM00487	DEAD-like helicases superfamily
SanJ4211_0405	SM00490	helicase superfamily c-terminal domain
SanJ4211_0408	SM00331	Sigma factor PP2C-like phosphatases
SanJ4211_0408	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
SanJ4211_0409	SM00220	Serine/Threonine protein kinases, catalytic domain
SanJ4211_0409	SM00740	SanJ4211_0409
SanJ4211_0412	SM00421	helix_turn_helix, Lux Regulon
SanJ4211_0412	SM00448	cheY-homologous receiver domain
SanJ4211_0414	SM00316	Ribosomal protein S1-like RNA-binding domain
SanJ4211_0430	SM00487	DEAD-like helicases superfamily
SanJ4211_0430	SM00490	helicase superfamily c-terminal domain
SanJ4211_0443	SM00450	Rhodanese Homology Domain
SanJ4211_0445	SM00838	Elongation factor G C-terminus
SanJ4211_0450	SM00842	Cell division protein FtsA
SanJ4211_0451	SM00864	Tubulin/FtsZ family, GTPase domain
SanJ4211_0451	SM00865	Tubulin/FtsZ family, C-terminal domain
SanJ4211_0455	SM00363	S4 RNA-binding domain
SanJ4211_0458c	SM00347	helix_turn_helix multiple antibiotic resistance protein
SanJ4211_0463	SM01091	Transporter associated domain
SanJ4211_0464c	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SanJ4211_0464c	SM00866	SanJ4211_0464c
SanJ4211_0468	SM00642	Alpha-amylase domain
SanJ4211_0471	SM01131	SanJ4211_0471
SanJ4211_0479	SM00831	Cation transporter/ATPase, N-terminus
SanJ4211_0487	SM00382	ATPases associated with a variety of cellular activities
SanJ4211_0488	SM00382	ATPases associated with a variety of cellular activities
SanJ4211_0489	SM00116	Domain in cystathionine beta-synthase and other proteins.
SanJ4211_0497	SM00478	endonuclease III
SanJ4211_0499	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
SanJ4211_0506	SM00448	cheY-homologous receiver domain
SanJ4211_0506	SM00862	Transcriptional regulatory protein, C terminal
SanJ4211_0507	SM00387	Histidine kinase-like ATPases
SanJ4211_0510	SM00382	ATPases associated with a variety of cellular activities
SanJ4211_0512	SM00382	ATPases associated with a variety of cellular activities
SanJ4211_0514	SM00850	LytTr DNA-binding domain
SanJ4211_0516	SM00382	ATPases associated with a variety of cellular activities
SanJ4211_0522c	SM00357	Cold shock protein domain
SanJ4211_0526	SM01022	SanJ4211_0526
SanJ4211_0533	SM00382	ATPases associated with a variety of cellular activities
SanJ4211_0537	SM00382	ATPases associated with a variety of cellular activities
SanJ4211_0537	SM00843	SanJ4211_0537
SanJ4211_0540	SM00649	Ribosomal protein L11/L12
SanJ4211_0544	SM01329	SanJ4211_0544
SanJ4211_0551	SM00382	ATPases associated with a variety of cellular activities
SanJ4211_0555c	SM00448	cheY-homologous receiver domain
SanJ4211_0555c	SM00850	LytTr DNA-binding domain
SanJ4211_0564	SM00419	helix_turn_helix, cAMP Regulatory protein
SanJ4211_0591	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
SanJ4211_0599c	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
SanJ4211_0602	SM00831	Cation transporter/ATPase, N-terminus
SanJ4211_0608	SM00937	SanJ4211_0608
SanJ4211_0609	SM00382	ATPases associated with a variety of cellular activities
SanJ4211_0611c	SM00849	Metallo-beta-lactamase superfamily
SanJ4211_0612	SM00479	SanJ4211_0612
SanJ4211_0612	SM00487	DEAD-like helicases superfamily
SanJ4211_0612	SM00491	SanJ4211_0612
SanJ4211_0617	SM00387	Histidine kinase-like ATPases
SanJ4211_0617	SM00433	TopoisomeraseII
SanJ4211_0623	SM00448	cheY-homologous receiver domain
SanJ4211_0623	SM00862	Transcriptional regulatory protein, C terminal
SanJ4211_0624	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SanJ4211_0624	SM00387	Histidine kinase-like ATPases
SanJ4211_0624	SM00388	His Kinase A (phosphoacceptor) domain
SanJ4211_0626	SM00028	Tetratricopeptide repeats
SanJ4211_0632	SM00382	ATPases associated with a variety of cellular activities
SanJ4211_0635	SM00382	ATPases associated with a variety of cellular activities
SanJ4211_0639	SM00642	Alpha-amylase domain
SanJ4211_0650	SM00382	ATPases associated with a variety of cellular activities
SanJ4211_0655	SM00892	DNA/RNA non-specific endonuclease
SanJ4211_0656	SM00382	ATPases associated with a variety of cellular activities
SanJ4211_0657	SM00382	ATPases associated with a variety of cellular activities
SanJ4211_0684	SM00382	ATPases associated with a variety of cellular activities
SanJ4211_0691	SM00354	helix_turn _helix lactose operon repressor
SanJ4211_0695	SM00448	cheY-homologous receiver domain
SanJ4211_0695	SM00862	Transcriptional regulatory protein, C terminal
SanJ4211_0696	SM00091	PAS domain
SanJ4211_0696	SM00387	Histidine kinase-like ATPases
SanJ4211_0696	SM00388	His Kinase A (phosphoacceptor) domain
SanJ4211_0697	SM00849	Metallo-beta-lactamase superfamily
SanJ4211_0700	SM00358	Double-stranded RNA binding motif
SanJ4211_0700	SM00535	Ribonuclease III family
SanJ4211_0701	SM00968	SMC proteins Flexible Hinge Domain
SanJ4211_0704	SM00382	ATPases associated with a variety of cellular activities
SanJ4211_0704	SM00962	SRP54-type protein, GTPase domain
SanJ4211_0704	SM00963	SRP54-type protein, helical bundle domain
SanJ4211_0710	SM00316	Ribosomal protein S1-like RNA-binding domain
SanJ4211_0710	SM00732	Likely ribonuclease with RNase H fold.
SanJ4211_0711	SM00731	SprT homologues.
SanJ4211_0721	SM00849	Metallo-beta-lactamase superfamily
SanJ4211_0725	SM00382	ATPases associated with a variety of cellular activities
SanJ4211_0744c	SM00487	DEAD-like helicases superfamily
SanJ4211_0744c	SM00490	helicase superfamily c-terminal domain
SanJ4211_0750	SM00838	Elongation factor G C-terminus
SanJ4211_0753	SM00382	ATPases associated with a variety of cellular activities
SanJ4211_0760	SM00116	Domain in cystathionine beta-synthase and other proteins.
SanJ4211_0760	SM00420	helix_turn_helix, Deoxyribose operon repressor
SanJ4211_0764	SM00981	SanJ4211_0764
SanJ4211_0769	SM00450	Rhodanese Homology Domain
SanJ4211_0770	SM00450	Rhodanese Homology Domain
SanJ4211_0771	SM00450	Rhodanese Homology Domain
SanJ4211_0778	SM00363	S4 RNA-binding domain
SanJ4211_0784	SM00830	Chorismate mutase type II
SanJ4211_0789	SM00382	ATPases associated with a variety of cellular activities
SanJ4211_0789	SM00994	ClpX C4-type zinc finger
SanJ4211_0789	SM01086	C-terminal, D2-small domain, of ClpB protein
SanJ4211_0791	SM00047	Lysozyme subfamily 2
SanJ4211_0792	SM00382	ATPases associated with a variety of cellular activities
SanJ4211_0793	SM00382	ATPases associated with a variety of cellular activities
SanJ4211_0794c	SM00382	ATPases associated with a variety of cellular activities
SanJ4211_0795c	SM00382	ATPases associated with a variety of cellular activities
SanJ4211_0796c	SM00062	Bacterial periplasmic substrate-binding proteins
SanJ4211_0796c	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
SanJ4211_0796c	SM00918	Ligated ion channel L-glutamate- and glycine-binding site
SanJ4211_0798	SM00487	DEAD-like helicases superfamily
SanJ4211_0798	SM00490	helicase superfamily c-terminal domain
SanJ4211_0801	SM00382	ATPases associated with a variety of cellular activities
SanJ4211_0803	SM00729	Elongator protein 3, MiaB family, Radical SAM
SanJ4211_0808	SM00562	SanJ4211_0808
SanJ4211_0815	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
SanJ4211_0816	SM00851	MGS-like domain
SanJ4211_0816	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
SanJ4211_0816	SM01209	SanJ4211_0816
SanJ4211_0828	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
SanJ4211_0831	SM01022	SanJ4211_0831
SanJ4211_0837c	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
SanJ4211_0837c	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
SanJ4211_0843	SM00382	ATPases associated with a variety of cellular activities
SanJ4211_0844	SM00382	ATPases associated with a variety of cellular activities
SanJ4211_0853	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
SanJ4211_0853	SM01232	SanJ4211_0853
SanJ4211_0857	SM00316	Ribosomal protein S1-like RNA-binding domain
SanJ4211_0857	SM00955	SanJ4211_0857
SanJ4211_0861	SM00278	Helix-hairpin-helix DNA-binding motif class 1
SanJ4211_0862	SM00849	Metallo-beta-lactamase superfamily
SanJ4211_0866	SM00986	Uracil DNA glycosylase superfamily
SanJ4211_0866	SM00987	UreE urease accessory protein, C-terminal domain 
SanJ4211_0872	SM00116	Domain in cystathionine beta-synthase and other proteins.
SanJ4211_0875	SM00347	helix_turn_helix multiple antibiotic resistance protein
SanJ4211_0876	SM00873	B3/4 domain
SanJ4211_0880	SM00292	breast cancer carboxy-terminal domain
SanJ4211_0880	SM00532	Ligase N family
SanJ4211_0881	SM00046	Diacylglycerol kinase catalytic domain (presumed)
SanJ4211_0882	SM00642	Alpha-amylase domain
SanJ4211_0891	SM00382	ATPases associated with a variety of cellular activities
SanJ4211_0892	SM00382	ATPases associated with a variety of cellular activities
SanJ4211_0893c	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SanJ4211_0902	SM00400	zinc finger
SanJ4211_0902	SM00493	SanJ4211_0902
SanJ4211_0909	SM00342	helix_turn_helix, arabinose operon control protein
SanJ4211_0909	SM00448	cheY-homologous receiver domain
SanJ4211_0910	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SanJ4211_0910	SM00387	Histidine kinase-like ATPases
SanJ4211_0913c	SM00382	ATPases associated with a variety of cellular activities
SanJ4211_0918c	SM00387	Histidine kinase-like ATPases
SanJ4211_0918c	SM00388	His Kinase A (phosphoacceptor) domain
SanJ4211_0919c	SM00448	cheY-homologous receiver domain
SanJ4211_0919c	SM00862	Transcriptional regulatory protein, C terminal
SanJ4211_0920	SM00382	ATPases associated with a variety of cellular activities
SanJ4211_0924	SM01240	SanJ4211_0924
SanJ4211_0930	SM00937	SanJ4211_0930
SanJ4211_0938	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SanJ4211_0938	SM00866	SanJ4211_0938
SanJ4211_0940	SM00382	ATPases associated with a variety of cellular activities
SanJ4211_0940	SM00962	SRP54-type protein, GTPase domain
SanJ4211_0940	SM00963	SRP54-type protein, helical bundle domain
SanJ4211_0947c	SM00861	Transketolase, pyrimidine binding domain
SanJ4211_0954c	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
SanJ4211_0954c	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
SanJ4211_0954c	SM00493	SanJ4211_0954c
SanJ4211_0956c	SM01266	SanJ4211_0956c
SanJ4211_0957c	SM01061	CAT RNA binding domain
SanJ4211_0960c	SM00849	Metallo-beta-lactamase superfamily
SanJ4211_0963c	SM00882	Coenzyme A transferase
SanJ4211_0964c	SM00882	Coenzyme A transferase
SanJ4211_0971c	SM00434	DNA Topoisomerase IV
SanJ4211_0974c	SM00316	Ribosomal protein S1-like RNA-binding domain
SanJ4211_0977c	SM00434	DNA Topoisomerase IV
SanJ4211_0981c	SM00387	Histidine kinase-like ATPases
SanJ4211_0981c	SM00433	TopoisomeraseII
SanJ4211_0982	SM01207	SanJ4211_0982
SanJ4211_0991c	SM01192	SanJ4211_0991c
SanJ4211_0991c	SM01193	SanJ4211_0991c
SanJ4211_1000	SM00347	helix_turn_helix multiple antibiotic resistance protein
SanJ4211_1007c	SM00382	ATPases associated with a variety of cellular activities
SanJ4211_1010c	SM01133	SanJ4211_1010c
SanJ4211_1011c	SM00941	Pyrimidine nucleoside phosphorylase C-terminal domain
SanJ4211_1017	SM00642	Alpha-amylase domain
SanJ4211_1019c	SM00387	Histidine kinase-like ATPases
SanJ4211_1019c	SM00388	His Kinase A (phosphoacceptor) domain
SanJ4211_1020c	SM00448	cheY-homologous receiver domain
SanJ4211_1020c	SM00862	Transcriptional regulatory protein, C terminal
SanJ4211_1027	SM00530	Helix-turn-helix XRE-family like proteins 
SanJ4211_1053	SM00354	helix_turn _helix lactose operon repressor
SanJ4211_1057c	SM00382	ATPases associated with a variety of cellular activities
SanJ4211_1065c	SM00382	ATPases associated with a variety of cellular activities
SanJ4211_1072c	SM00382	ATPases associated with a variety of cellular activities
SanJ4211_1079c	SM00342	helix_turn_helix, arabinose operon control protein
SanJ4211_1079c	SM00871	Bacterial transcription activator, effector binding domain
SanJ4211_1081c	SM01130	SanJ4211_1081c
SanJ4211_1082c	SM00859	Semialdehyde dehydrogenase, NAD binding domain
SanJ4211_1092c	SM00478	endonuclease III
SanJ4211_1096c	SM00954	Region found in RelA / SpoT proteins
SanJ4211_1097	SM01118	SanJ4211_1097
SanJ4211_1098	SM01400	SanJ4211_1098
SanJ4211_1101	SM00881	CoA binding domain
SanJ4211_1106c	SM00382	ATPases associated with a variety of cellular activities
SanJ4211_1107c	SM00382	ATPases associated with a variety of cellular activities
SanJ4211_1115c	SM00904	Riboflavin kinase
SanJ4211_1119c	SM00382	ATPases associated with a variety of cellular activities
SanJ4211_1120c	SM00382	ATPases associated with a variety of cellular activities
SanJ4211_1125c	SM00062	Bacterial periplasmic substrate-binding proteins
SanJ4211_1126c	SM00382	ATPases associated with a variety of cellular activities
SanJ4211_1131c	SM00481	DNA polymerase alpha chain like domain
SanJ4211_1132	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SanJ4211_1133	SM00382	ATPases associated with a variety of cellular activities
SanJ4211_1139c	SM00855	Phosphoglycerate mutase family
SanJ4211_1146c	SM00382	ATPases associated with a variety of cellular activities
SanJ4211_1158c	SM00873	B3/4 domain
SanJ4211_1158c	SM00874	tRNA synthetase B5 domain
SanJ4211_1158c	SM00896	Ferredoxin-fold anticodon binding domain
SanJ4211_1161c	SM00382	ATPases associated with a variety of cellular activities
SanJ4211_1168c	SM00420	helix_turn_helix, Deoxyribose operon repressor
SanJ4211_1168c	SM01134	SanJ4211_1168c
SanJ4211_1180c	SM00857	Resolvase, N terminal domain
SanJ4211_1182c	SM00530	Helix-turn-helix XRE-family like proteins 
SanJ4211_1187c	SM01061	CAT RNA binding domain
SanJ4211_1188c	SM01133	SanJ4211_1188c
SanJ4211_1192c	SM00420	helix_turn_helix, Deoxyribose operon repressor
SanJ4211_1192c	SM01134	SanJ4211_1192c
SanJ4211_1196c	SM00382	ATPases associated with a variety of cellular activities
SanJ4211_1199c	SM00530	Helix-turn-helix XRE-family like proteins 
SanJ4211_1203c	SM00400	zinc finger
SanJ4211_1207c	SM00487	DEAD-like helicases superfamily
SanJ4211_1207c	SM00490	helicase superfamily c-terminal domain
SanJ4211_1252c	SM00641	Glycosyl hydrolases family 25
SanJ4211_1262	SM00855	Phosphoglycerate mutase family
SanJ4211_1273c	SM00420	helix_turn_helix, Deoxyribose operon repressor
SanJ4211_1273c	SM01134	SanJ4211_1273c
SanJ4211_1279c	SM00382	ATPases associated with a variety of cellular activities
SanJ4211_1281c	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
SanJ4211_1289c	SM00829	Enoylreductase
SanJ4211_1290c	SM00382	ATPases associated with a variety of cellular activities
SanJ4211_1292c	SM00347	helix_turn_helix multiple antibiotic resistance protein
SanJ4211_1293c	SM00986	Uracil DNA glycosylase superfamily
SanJ4211_1293c	SM00987	UreE urease accessory protein, C-terminal domain 
SanJ4211_1297c	SM00465	GIY-YIG type nucleases (URI domain)
SanJ4211_1306c	SM00530	Helix-turn-helix XRE-family like proteins 
SanJ4211_1309c	SM00563	Phosphate acyltransferases
SanJ4211_1317c	SM01061	CAT RNA binding domain
SanJ4211_1325c	SM00420	helix_turn_helix, Deoxyribose operon repressor
SanJ4211_1325c	SM01134	SanJ4211_1325c
SanJ4211_1326	SM01133	SanJ4211_1326
SanJ4211_1327c	SM00487	DEAD-like helicases superfamily
SanJ4211_1327c	SM00490	helicase superfamily c-terminal domain
SanJ4211_1331c	SM00530	Helix-turn-helix XRE-family like proteins 
SanJ4211_1337c	SM00493	SanJ4211_1337c
SanJ4211_1341c	SM00530	Helix-turn-helix XRE-family like proteins 
SanJ4211_1345c	SM00855	Phosphoglycerate mutase family
SanJ4211_1347c	SM00257	Lysin motif
SanJ4211_1347c	SM00641	Glycosyl hydrolases family 25
SanJ4211_1363c	SM00495	Chitin-binding domain type 3
SanJ4211_1378c	SM00487	DEAD-like helicases superfamily
SanJ4211_1378c	SM00490	helicase superfamily c-terminal domain
SanJ4211_1391c	SM00530	Helix-turn-helix XRE-family like proteins 
SanJ4211_1393c	SM00530	Helix-turn-helix XRE-family like proteins 
SanJ4211_1396	SM00530	Helix-turn-helix XRE-family like proteins 
SanJ4211_1399c	SM00411	bacterial (prokaryotic) histone like domain
SanJ4211_1404	SM00382	ATPases associated with a variety of cellular activities
SanJ4211_1418	SM00382	ATPases associated with a variety of cellular activities
SanJ4211_1423c	SM00899	SanJ4211_1423c
SanJ4211_1425	SM00382	ATPases associated with a variety of cellular activities
SanJ4211_1425	SM01086	C-terminal, D2-small domain, of ClpB protein
SanJ4211_1433c	SM00729	Elongator protein 3, MiaB family, Radical SAM
SanJ4211_1435c	SM00014	Acid phosphatase homologues
SanJ4211_1443c	SM01234	SanJ4211_1443c
SanJ4211_1444c	SM00363	S4 RNA-binding domain
SanJ4211_1448c	SM00116	Domain in cystathionine beta-synthase and other proteins.
SanJ4211_1456c	SM00967	RNA 2'-O ribose methyltransferase substrate binding
SanJ4211_1467c	SM00487	DEAD-like helicases superfamily
SanJ4211_1467c	SM00490	helicase superfamily c-terminal domain
SanJ4211_1479c	SM00448	cheY-homologous receiver domain
SanJ4211_1479c	SM00862	Transcriptional regulatory protein, C terminal
SanJ4211_1480c	SM01350	SanJ4211_1480c
SanJ4211_1492c	SM00382	ATPases associated with a variety of cellular activities
SanJ4211_1501c	SM00062	Bacterial periplasmic substrate-binding proteins
SanJ4211_1505c	SM00530	Helix-turn-helix XRE-family like proteins 
SanJ4211_1511c	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
SanJ4211_1513c	SM01103	SanJ4211_1513c
SanJ4211_1518c	SM00845	GatB domain
SanJ4211_1527	SM00870	SanJ4211_1527
SanJ4211_1528c	SM00487	DEAD-like helicases superfamily
SanJ4211_1528c	SM00490	helicase superfamily c-terminal domain
SanJ4211_1529c	SM01005	Alanine racemase, C-terminal domain
SanJ4211_1532c	SM00957	SecA DEAD-like domain
SanJ4211_1532c	SM00958	SecA preprotein cross-linking domain
SanJ4211_1535c	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SanJ4211_1535c	SM00866	SanJ4211_1535c
SanJ4211_1540c	SM00382	ATPases associated with a variety of cellular activities
SanJ4211_1541c	SM00382	ATPases associated with a variety of cellular activities
SanJ4211_1542c	SM00347	helix_turn_helix multiple antibiotic resistance protein
SanJ4211_1546	SM00640	Glycosyl hydrolases family 32
SanJ4211_1547	SM00354	helix_turn _helix lactose operon repressor
SanJ4211_1549c	SM00382	ATPases associated with a variety of cellular activities
SanJ4211_1550c	SM00382	ATPases associated with a variety of cellular activities
SanJ4211_1555c	SM00873	B3/4 domain
SanJ4211_1564c	SM00271	DnaJ molecular chaperone homology domain
SanJ4211_1569c	SM00855	Phosphoglycerate mutase family
SanJ4211_1570c	SM00855	Phosphoglycerate mutase family
SanJ4211_1589	SM00530	Helix-turn-helix XRE-family like proteins 
SanJ4211_1595c	SM00967	RNA 2'-O ribose methyltransferase substrate binding
SanJ4211_1596c	SM00382	ATPases associated with a variety of cellular activities
SanJ4211_1599c	SM00840	SanJ4211_1599c
SanJ4211_1601c	SM00316	Ribosomal protein S1-like RNA-binding domain
SanJ4211_1601c	SM00322	K homology RNA-binding domain
SanJ4211_1603c	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
SanJ4211_1607c	SM01387	SanJ4211_1607c
SanJ4211_1617c	SM00479	SanJ4211_1617c
SanJ4211_1617c	SM00481	DNA polymerase alpha chain like domain
SanJ4211_1620c	SM00642	Alpha-amylase domain
SanJ4211_1626c	SM00354	helix_turn _helix lactose operon repressor
SanJ4211_1631c	SM00841	Elongation factor P, C-terminal
SanJ4211_1631c	SM01185	SanJ4211_1631c
SanJ4211_1634c	SM00382	ATPases associated with a variety of cellular activities
SanJ4211_1643c	SM00855	Phosphoglycerate mutase family
SanJ4211_1650	SM00382	ATPases associated with a variety of cellular activities
SanJ4211_1653	SM00382	ATPases associated with a variety of cellular activities
SanJ4211_1655c	SM00388	His Kinase A (phosphoacceptor) domain
SanJ4211_1656c	SM00448	cheY-homologous receiver domain
SanJ4211_1656c	SM00862	Transcriptional regulatory protein, C terminal
SanJ4211_1660c	SM00287	Bacterial SH3 domain homologues
SanJ4211_1663c	SM00530	Helix-turn-helix XRE-family like proteins 
SanJ4211_1669	SM00342	helix_turn_helix, arabinose operon control protein
SanJ4211_1671c	SM00854	Bacterial capsule synthesis protein PGA_cap
SanJ4211_1674	SM00966	SpoVT / AbrB like domain 
SanJ4211_1675	SM00382	ATPases associated with a variety of cellular activities
SanJ4211_1689	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
SanJ4211_1695c	SM00463	Small MutS-related domain
SanJ4211_1695c	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
SanJ4211_1695c	SM00534	ATPase domain of DNA mismatch repair MUTS family
SanJ4211_1712	SM00849	Metallo-beta-lactamase superfamily
SanJ4211_1713c	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
SanJ4211_1714c	SM00838	Elongation factor G C-terminus
SanJ4211_1714c	SM00889	Elongation factor G, domain IV
SanJ4211_1721c	SM00983	Thiamin pyrophosphokinase, vitamin B1 binding domain
SanJ4211_1724c	SM00650	Ribosomal RNA adenine dimethylases
SanJ4211_1726c	SM00493	SanJ4211_1726c
SanJ4211_1731c	SM00393	Putative single-stranded nucleic acids-binding domain
SanJ4211_1731c	SM01245	SanJ4211_1731c
SanJ4211_1739c	SM00788	Adenylosuccinate synthetase
SanJ4211_1749c	SM00382	ATPases associated with a variety of cellular activities
SanJ4211_1749c	SM01086	C-terminal, D2-small domain, of ClpB protein
SanJ4211_1757c	SM00662	RNA polymerases D
SanJ4211_1760c	SM00316	Ribosomal protein S1-like RNA-binding domain
SanJ4211_1772c	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
SanJ4211_1773c	SM01374	SanJ4211_1773c
SanJ4211_1777c	SM00322	K homology RNA-binding domain
SanJ4211_1780c	SM01382	SanJ4211_1780c
SanJ4211_1780c	SM01383	SanJ4211_1780c
SanJ4211_1784c	SM01403	SanJ4211_1784c
SanJ4211_1791c	SM00881	CoA binding domain
SanJ4211_1792c	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
SanJ4211_1792c	SM00474	3'-5' exonuclease
SanJ4211_1792c	SM00475	5'-3' exonuclease
SanJ4211_1792c	SM00482	DNA polymerase A domain
SanJ4211_1793c	SM00387	Histidine kinase-like ATPases
SanJ4211_1793c	SM00388	His Kinase A (phosphoacceptor) domain
SanJ4211_1794c	SM00448	cheY-homologous receiver domain
SanJ4211_1794c	SM00862	Transcriptional regulatory protein, C terminal
SanJ4211_1824c	SM00155	Phospholipase D. Active site motifs.
SanJ4211_1828c	SM00732	Likely ribonuclease with RNase H fold.
SanJ4211_1833c	SM00382	ATPases associated with a variety of cellular activities
SanJ4211_1834c	SM00852	Probable molybdopterin binding domain
SanJ4211_1837c	SM00278	Helix-hairpin-helix DNA-binding motif class 1
SanJ4211_1838	SM00530	Helix-turn-helix XRE-family like proteins 
SanJ4211_1839c	SM00853	MutL C terminal dimerisation domain
SanJ4211_1839c	SM01340	SanJ4211_1839c
SanJ4211_1840	SM00850	LytTr DNA-binding domain
SanJ4211_1842c	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
SanJ4211_1842c	SM00534	ATPase domain of DNA mismatch repair MUTS family
SanJ4211_1844	SM00836	DALR anticodon binding domain
SanJ4211_1844	SM01016	Arginyl tRNA synthetase N terminal dom
SanJ4211_1853	SM00354	helix_turn _helix lactose operon repressor
SanJ4211_1854	SM00642	Alpha-amylase domain
SanJ4211_1866	SM00530	Helix-turn-helix XRE-family like proteins 
SanJ4211_1892c	SM00363	S4 RNA-binding domain
SanJ4211_1892c	SM01390	SanJ4211_1892c
SanJ4211_1898c	SM01228	SanJ4211_1898c
SanJ4211_1900c	SM00257	Lysin motif
SanJ4211_1904c	SM00257	Lysin motif
SanJ4211_1906c	SM00382	ATPases associated with a variety of cellular activities
SanJ4211_1907c	SM00382	ATPases associated with a variety of cellular activities
SanJ4211_1914c	SM00116	Domain in cystathionine beta-synthase and other proteins.
SanJ4211_1914c	SM01240	SanJ4211_1914c
SanJ4211_1919	SM00382	ATPases associated with a variety of cellular activities
SanJ4211_1921c	SM00448	cheY-homologous receiver domain
SanJ4211_1921c	SM00850	LytTr DNA-binding domain
SanJ4211_1925	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
SanJ4211_1926	SM00470	ParB-like nuclease domain
