##gff-version 3
#!gff-spec-version 1.21
#!processor NCBI annotwriter
#!genome-build ASM260444v1
#!genome-build-accession NCBI_Assembly:GCA_002604445.1
##sequence-region KJ417497.1 1 41323
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1461246
KJ417497.1	Genbank	region	1	41323	.	+	.	ID=KJ417497.1:1..41323;Dbxref=taxon:1461246;gbkey=Src;genome=proviral;isolation-source=human challenge study%2C bacterial isolate%2C McCool et al 2002;mol_type=genomic DNA;nat-host=Streptococcus pneumoniae P1121;old-name=Streptococcus pneumoniae phage element Spn1
KJ417497.1	Genbank	CDS	103	1230	.	-	0	ID=cds-AHN84588.1;Dbxref=NCBI_GP:AHN84588.1;Name=AHN84588.1;Note=prophage LambdaSa1 site-specific recombinase%3B phage integrase family;gbkey=CDS;product=site-specific recombinase;protein_id=AHN84588.1;transl_table=11
KJ417497.1	Genbank	CDS	1509	2459	.	-	0	ID=cds-AHN84589.1;Dbxref=NCBI_GP:AHN84589.1;Name=AHN84589.1;gbkey=CDS;product=abortive infection bacteriophage resistance protein;protein_id=AHN84589.1;transl_table=11
KJ417497.1	Genbank	CDS	2608	3399	.	-	0	ID=cds-AHN84590.1;Dbxref=NCBI_GP:AHN84590.1;Name=AHN84590.1;gbkey=CDS;product=CI-like repressor;protein_id=AHN84590.1;transl_table=11
KJ417497.1	Genbank	CDS	3561	3692	.	+	0	ID=cds-AHN84591.1;Dbxref=NCBI_GP:AHN84591.1;Name=AHN84591.1;gbkey=CDS;product=hypothetical protein;protein_id=AHN84591.1;transl_table=11
KJ417497.1	Genbank	CDS	3643	4332	.	-	0	ID=cds-AHN84592.1;Dbxref=NCBI_GP:AHN84592.1;Name=AHN84592.1;Note=putative phage protein;gbkey=CDS;product=hypothetical protein;protein_id=AHN84592.1;transl_table=11
KJ417497.1	Genbank	CDS	4389	4523	.	+	0	ID=cds-AHN84593.1;Dbxref=NCBI_GP:AHN84593.1;Name=AHN84593.1;gbkey=CDS;product=hypothetical protein;protein_id=AHN84593.1;transl_table=11
KJ417497.1	Genbank	CDS	4539	4703	.	+	0	ID=cds-AHN84594.1;Dbxref=NCBI_GP:AHN84594.1;Name=AHN84594.1;gbkey=CDS;product=hypothetical protein;protein_id=AHN84594.1;transl_table=11
KJ417497.1	Genbank	CDS	4722	4934	.	+	0	ID=cds-AHN84595.1;Dbxref=NCBI_GP:AHN84595.1;Name=AHN84595.1;gbkey=CDS;product=putative phage transcriptional regulator;protein_id=AHN84595.1;transl_table=11
KJ417497.1	Genbank	CDS	4970	5170	.	+	0	ID=cds-AHN84596.1;Dbxref=NCBI_GP:AHN84596.1;Name=AHN84596.1;gbkey=CDS;product=hypothetical protein;protein_id=AHN84596.1;transl_table=11
KJ417497.1	Genbank	CDS	5409	5612	.	+	0	ID=cds-AHN84597.1;Dbxref=NCBI_GP:AHN84597.1;Name=AHN84597.1;gbkey=CDS;product=hypothetical protein;protein_id=AHN84597.1;transl_table=11
KJ417497.1	Genbank	CDS	5569	5760	.	-	0	ID=cds-AHN84598.1;Dbxref=NCBI_GP:AHN84598.1;Name=AHN84598.1;Note=FIG01115421: hypothetical protein;gbkey=CDS;product=hypothetical protein;protein_id=AHN84598.1;transl_table=11
KJ417497.1	Genbank	CDS	5867	6022	.	+	0	ID=cds-AHN84599.1;Dbxref=NCBI_GP:AHN84599.1;Name=AHN84599.1;gbkey=CDS;product=hypothetical protein;protein_id=AHN84599.1;transl_table=11
KJ417497.1	Genbank	CDS	6019	6189	.	+	0	ID=cds-AHN84600.1;Dbxref=NCBI_GP:AHN84600.1;Name=AHN84600.1;Note=DNA2C;gbkey=CDS;product=hypothetical protein;protein_id=AHN84600.1;transl_table=11
KJ417497.1	Genbank	CDS	6182	6421	.	-	0	ID=cds-AHN84601.1;Dbxref=NCBI_GP:AHN84601.1;Name=AHN84601.1;Note=ORF065;gbkey=CDS;product=hypothetical protein;protein_id=AHN84601.1;transl_table=11
KJ417497.1	Genbank	CDS	6539	6811	.	+	0	ID=cds-AHN84602.1;Dbxref=NCBI_GP:AHN84602.1;Name=AHN84602.1;Note=FIG01114905: hypothetical protein;gbkey=CDS;product=hypothetical protein;protein_id=AHN84602.1;transl_table=11
KJ417497.1	Genbank	CDS	6808	7023	.	+	0	ID=cds-AHN84603.1;Dbxref=NCBI_GP:AHN84603.1;Name=AHN84603.1;Note=FIG01119262: hypothetical protein;gbkey=CDS;product=hypothetical protein;protein_id=AHN84603.1;transl_table=11
KJ417497.1	Genbank	CDS	7002	7190	.	+	0	ID=cds-AHN84604.1;Dbxref=NCBI_GP:AHN84604.1;Name=AHN84604.1;Note=FIG01116376: hypothetical protein;gbkey=CDS;product=hypothetical protein;protein_id=AHN84604.1;transl_table=11
KJ417497.1	Genbank	CDS	7202	7543	.	+	0	ID=cds-AHN84605.1;Dbxref=NCBI_GP:AHN84605.1;Name=AHN84605.1;Note=putative phage protein;gbkey=CDS;product=hypothetical protein;protein_id=AHN84605.1;transl_table=11
KJ417497.1	Genbank	CDS	7544	7774	.	+	0	ID=cds-AHN84606.1;Dbxref=NCBI_GP:AHN84606.1;Name=AHN84606.1;Note=putative DNA-directed RNA polymerase beta' subunit/160 kD subunit COG0086;gbkey=CDS;product=putative DNA-directed RNA polymerase beta' subunit;protein_id=AHN84606.1;transl_table=11
KJ417497.1	Genbank	CDS	7788	8510	.	+	0	ID=cds-AHN84607.1;Dbxref=NCBI_GP:AHN84607.1;Name=AHN84607.1;Note=Bacteriophage phi 1.45 protein-like protein;gbkey=CDS;product=hypothetical protein;protein_id=AHN84607.1;transl_table=11
KJ417497.1	Genbank	CDS	8503	8985	.	+	0	ID=cds-AHN84608.1;Dbxref=NCBI_GP:AHN84608.1;Name=AHN84608.1;Note=FIG01114465: hypothetical protein;gbkey=CDS;product=hypothetical protein;protein_id=AHN84608.1;transl_table=11
KJ417497.1	Genbank	CDS	8985	9344	.	+	0	ID=cds-AHN84609.1;Dbxref=NCBI_GP:AHN84609.1;Name=AHN84609.1;Note=FIG01116409: hypothetical protein;gbkey=CDS;product=hypothetical protein;protein_id=AHN84609.1;transl_table=11
KJ417497.1	Genbank	CDS	9344	9829	.	+	0	ID=cds-AHN84610.1;Dbxref=NCBI_GP:AHN84610.1;Name=AHN84610.1;Note=FIG01115915: hypothetical protein;gbkey=CDS;product=hypothetical protein;protein_id=AHN84610.1;transl_table=11
KJ417497.1	Genbank	CDS	9792	10985	.	+	0	ID=cds-AHN84611.1;Dbxref=NCBI_GP:AHN84611.1;Name=AHN84611.1;Note=FIG01117510: hypothetical protein;gbkey=CDS;product=hypothetical protein;protein_id=AHN84611.1;transl_table=11
KJ417497.1	Genbank	CDS	11003	11320	.	+	0	ID=cds-AHN84612.1;Dbxref=NCBI_GP:AHN84612.1;Name=AHN84612.1;gbkey=CDS;product=hypothetical protein;protein_id=AHN84612.1;transl_table=11
KJ417497.1	Genbank	CDS	11320	12147	.	+	0	ID=cds-AHN84613.1;Dbxref=NCBI_GP:AHN84613.1;Name=AHN84613.1;Note=FIG01115822: hypothetical protein;gbkey=CDS;product=hypothetical protein;protein_id=AHN84613.1;transl_table=11
KJ417497.1	Genbank	CDS	12167	12673	.	+	0	ID=cds-AHN84614.1;Dbxref=NCBI_GP:AHN84614.1;Name=AHN84614.1;Note=FIG01116895: hypothetical protein;gbkey=CDS;product=hypothetical protein;protein_id=AHN84614.1;transl_table=11
KJ417497.1	Genbank	CDS	12846	13667	.	+	0	ID=cds-AHN84615.1;Dbxref=NCBI_GP:AHN84615.1;Name=AHN84615.1;gbkey=CDS;product=putative replication protein;protein_id=AHN84615.1;transl_table=11
KJ417497.1	Genbank	CDS	13670	15013	.	+	0	ID=cds-AHN84616.1;Dbxref=NCBI_GP:AHN84616.1;Name=AHN84616.1;Note=FIG01115155: hypothetical protein;gbkey=CDS;product=hypothetical protein;protein_id=AHN84616.1;transl_table=11
KJ417497.1	Genbank	CDS	15306	15461	.	+	0	ID=cds-AHN84617.1;Dbxref=NCBI_GP:AHN84617.1;Name=AHN84617.1;Note=FIG01114199: hypothetical protein;gbkey=CDS;product=hypothetical protein;protein_id=AHN84617.1;transl_table=11
KJ417497.1	Genbank	CDS	15458	16153	.	+	0	ID=cds-AHN84618.1;Dbxref=NCBI_GP:AHN84618.1;Name=AHN84618.1;Note=putative phage protein;gbkey=CDS;product=hypothetical protein;protein_id=AHN84618.1;transl_table=11
KJ417497.1	Genbank	CDS	16153	16314	.	+	0	ID=cds-AHN84619.1;Dbxref=NCBI_GP:AHN84619.1;Name=AHN84619.1;gbkey=CDS;product=hypothetical protein;protein_id=AHN84619.1;transl_table=11
KJ417497.1	Genbank	CDS	16311	16571	.	+	0	ID=cds-AHN84620.1;Dbxref=NCBI_GP:AHN84620.1;Name=AHN84620.1;gbkey=CDS;product=hypothetical protein;protein_id=AHN84620.1;transl_table=11
KJ417497.1	Genbank	CDS	16571	17029	.	+	0	ID=cds-AHN84621.1;Dbxref=NCBI_GP:AHN84621.1;Name=AHN84621.1;gbkey=CDS;product=hypothetical protein;protein_id=AHN84621.1;transl_table=11
KJ417497.1	Genbank	CDS	17142	17579	.	+	0	ID=cds-AHN84622.1;Dbxref=NCBI_GP:AHN84622.1;Name=AHN84622.1;Note=FIG01116554: hypothetical protein;gbkey=CDS;product=hypothetical protein;protein_id=AHN84622.1;transl_table=11
KJ417497.1	Genbank	CDS	17576	17947	.	+	0	ID=cds-AHN84623.1;Dbxref=NCBI_GP:AHN84623.1;Name=AHN84623.1;gbkey=CDS;product=hypothetical protein;protein_id=AHN84623.1;transl_table=11
KJ417497.1	Genbank	CDS	18020	18424	.	+	0	ID=cds-AHN84624.1;Dbxref=NCBI_GP:AHN84624.1;Name=AHN84624.1;Note=FIG021474: Phage protein;gbkey=CDS;product=hypothetical protein;protein_id=AHN84624.1;transl_table=11
KJ417497.1	Genbank	CDS	18854	19333	.	+	0	ID=cds-AHN84625.1;Dbxref=NCBI_GP:AHN84625.1;Name=AHN84625.1;gbkey=CDS;product=terminase small subunit;protein_id=AHN84625.1;transl_table=11
KJ417497.1	Genbank	CDS	19311	20609	.	+	0	ID=cds-AHN84626.1;Dbxref=NCBI_GP:AHN84626.1;Name=AHN84626.1;gbkey=CDS;product=terminase large subunit;protein_id=AHN84626.1;transl_table=11
KJ417497.1	Genbank	CDS	20621	22090	.	+	0	ID=cds-AHN84627.1;Dbxref=NCBI_GP:AHN84627.1;Name=AHN84627.1;gbkey=CDS;product=portal protein;protein_id=AHN84627.1;transl_table=11
KJ417497.1	Genbank	CDS	22053	23402	.	+	0	ID=cds-AHN84628.1;Dbxref=NCBI_GP:AHN84628.1;Name=AHN84628.1;gbkey=CDS;product=capsid and scaffold protein;protein_id=AHN84628.1;transl_table=11
KJ417497.1	Genbank	CDS	23390	23617	.	+	0	ID=cds-AHN84629.1;Dbxref=NCBI_GP:AHN84629.1;Name=AHN84629.1;gbkey=CDS;product=isoleucyl-tRNA synthetase;protein_id=AHN84629.1;transl_table=11
KJ417497.1	Genbank	CDS	23766	23978	.	+	0	ID=cds-AHN84630.1;Dbxref=NCBI_GP:AHN84630.1;Name=AHN84630.1;Note=FIG01119721: hypothetical protein;gbkey=CDS;product=hypothetical protein;protein_id=AHN84630.1;transl_table=11
KJ417497.1	Genbank	CDS	24148	24732	.	+	0	ID=cds-AHN84631.1;Dbxref=NCBI_GP:AHN84631.1;Name=AHN84631.1;gbkey=CDS;product=capsid and scaffold protein;protein_id=AHN84631.1;transl_table=11
KJ417497.1	Genbank	CDS	24739	25584	.	+	0	ID=cds-AHN84632.1;Dbxref=NCBI_GP:AHN84632.1;Name=AHN84632.1;gbkey=CDS;product=major capsid protein;protein_id=AHN84632.1;transl_table=11
KJ417497.1	Genbank	CDS	25596	25778	.	+	0	ID=cds-AHN84633.1;Dbxref=NCBI_GP:AHN84633.1;Name=AHN84633.1;gbkey=CDS;product=hypothetical protein;protein_id=AHN84633.1;transl_table=11
KJ417497.1	Genbank	CDS	25768	25956	.	+	0	ID=cds-AHN84634.1;Dbxref=NCBI_GP:AHN84634.1;Name=AHN84634.1;Note=FIG01114532: hypothetical protein;gbkey=CDS;product=hypothetical protein;protein_id=AHN84634.1;transl_table=11
KJ417497.1	Genbank	CDS	25958	26269	.	+	0	ID=cds-AHN84635.1;Dbxref=NCBI_GP:AHN84635.1;Name=AHN84635.1;Note=FIG01118687: hypothetical protein;gbkey=CDS;product=hypothetical protein;protein_id=AHN84635.1;transl_table=11
KJ417497.1	Genbank	CDS	26286	26588	.	+	0	ID=cds-AHN84636.1;Dbxref=NCBI_GP:AHN84636.1;Name=AHN84636.1;Note=FIG01115617: hypothetical protein;gbkey=CDS;product=hypothetical protein;protein_id=AHN84636.1;transl_table=11
KJ417497.1	Genbank	CDS	26563	27078	.	+	0	ID=cds-AHN84637.1;Dbxref=NCBI_GP:AHN84637.1;Name=AHN84637.1;Note=Lj965 prophage protein;gbkey=CDS;product=hypothetical protein;protein_id=AHN84637.1;transl_table=11
KJ417497.1	Genbank	CDS	27075	27443	.	+	0	ID=cds-AHN84638.1;Dbxref=NCBI_GP:AHN84638.1;Name=AHN84638.1;Note=FIG01114380: hypothetical protein;gbkey=CDS;product=hypothetical protein;protein_id=AHN84638.1;transl_table=11
KJ417497.1	Genbank	CDS	27446	27859	.	+	0	ID=cds-AHN84639.1;Dbxref=NCBI_GP:AHN84639.1;Name=AHN84639.1;gbkey=CDS;product=putative major tail protein;protein_id=AHN84639.1;transl_table=11
KJ417497.1	Genbank	CDS	27864	28244	.	+	0	ID=cds-AHN84640.1;Dbxref=NCBI_GP:AHN84640.1;Name=AHN84640.1;Note=Lj965 prophage protein;gbkey=CDS;product=hypothetical protein;protein_id=AHN84640.1;transl_table=11
KJ417497.1	Genbank	CDS	28283	28633	.	+	0	ID=cds-AHN84641.1;Dbxref=NCBI_GP:AHN84641.1;Name=AHN84641.1;Note=FIG01116732: hypothetical protein;gbkey=CDS;product=hypothetical protein;protein_id=AHN84641.1;transl_table=11
KJ417497.1	Genbank	CDS	28620	32273	.	+	0	ID=cds-AHN84642.1;Dbxref=NCBI_GP:AHN84642.1;Name=AHN84642.1;gbkey=CDS;product=tail length tape-measure protein;protein_id=AHN84642.1;transl_table=11
KJ417497.1	Genbank	CDS	32282	32632	.	+	0	ID=cds-AHN84643.1;Dbxref=NCBI_GP:AHN84643.1;Name=AHN84643.1;Note=Lj965 prophage protein;gbkey=CDS;product=hypothetical protein;protein_id=AHN84643.1;transl_table=11
KJ417497.1	Genbank	CDS	32637	34193	.	+	0	ID=cds-AHN84644.1;Dbxref=NCBI_GP:AHN84644.1;Name=AHN84644.1;gbkey=CDS;product=hyaluronidase;protein_id=AHN84644.1;transl_table=11
KJ417497.1	Genbank	CDS	34199	38851	.	+	0	ID=cds-AHN84645.1;Dbxref=NCBI_GP:AHN84645.1;Name=AHN84645.1;gbkey=CDS;product=hyaluronidase;protein_id=AHN84645.1;transl_table=11
KJ417497.1	Genbank	CDS	38945	39148	.	+	0	ID=cds-AHN84646.1;Dbxref=NCBI_GP:AHN84646.1;Name=AHN84646.1;Note=conserved domain protein;gbkey=CDS;product=hypothetical protein;protein_id=AHN84646.1;transl_table=11
KJ417497.1	Genbank	CDS	39151	39501	.	+	0	ID=cds-AHN84647.1;Dbxref=NCBI_GP:AHN84647.1;Name=AHN84647.1;Note=FIG01114010: hypothetical protein;gbkey=CDS;product=hypothetical protein;protein_id=AHN84647.1;transl_table=11
KJ417497.1	Genbank	CDS	39510	39809	.	+	0	ID=cds-AHN84648.1;Dbxref=NCBI_GP:AHN84648.1;Name=AHN84648.1;Note=FIG01118066: hypothetical protein;gbkey=CDS;product=hypothetical protein;protein_id=AHN84648.1;transl_table=11
KJ417497.1	Genbank	CDS	39813	40145	.	+	0	ID=cds-AHN84649.1;Dbxref=NCBI_GP:AHN84649.1;Name=AHN84649.1;gbkey=CDS;product=holin;protein_id=AHN84649.1;transl_table=11
KJ417497.1	Genbank	CDS	40149	41105	.	+	0	ID=cds-AHN84650.1;Dbxref=NCBI_GP:AHN84650.1;Name=AHN84650.1;Note=LytA;gbkey=CDS;product=cell wall-associated murein hydrolase;protein_id=AHN84650.1;transl_table=11
###