LOCUS KT337368 7308 bp DNA linear PHG 01-MAR-2016 DEFINITION Streptococcus phage phiARI0831, partial genome. ACCESSION KT337368 VERSION KT337368.1 KEYWORDS . SOURCE Streptococcus phage phiARI0831 ORGANISM Streptococcus phage phiARI0831 Viruses; unclassified bacterial viruses. REFERENCE 1 (bases 1 to 7308) AUTHORS Croucher,N.J., Mostowy,R., Wymant,C., Turner,P., Bentley,S.D. and Fraser,C. TITLE Horizontal DNA Transfer Mechanisms of Bacteria as Weapons of Intragenomic Conflict JOURNAL PLoS Biol. 14 (3), E1002394 (2016) PUBMED 26934590 REMARK Publication Status: Online-Only REFERENCE 2 (bases 1 to 7308) AUTHORS Croucher,N.J. TITLE Direct Submission JOURNAL Submitted (23-JUL-2015) Department of Infectious Disease Epidemiology, Imperial College London, Norfolk Place, St. Mary's Campus, London, England W2 1PG, UK FEATURES Location/Qualifiers source 1..7308 /organism="Streptococcus phage phiARI0831" /proviral /mol_type="genomic DNA" /host="Streptococcus pneumoniae 10B04734" /db_xref="taxon:1701840" gene complement(527..1483) /locus_tag="phiARI0831_1" CDS complement(527..1483) /locus_tag="phiARI0831_1" /codon_start=1 /transl_table=11 /product="amidase_2 domain protein" /protein_id="ALH47225.1" /translation="MDIDTSRLRSGLPQVGVQPYRQIHAHSTGNRNSTAQNEVDYHYR KDPELGFFSHVVGNGRVMQVGPVNNGSWDVGGGWNTESYAAVELIESHSTKEEFMADY RLYIELLRNLADEAGLPKTLDTDDLEGIKTHEYCTNNQPNNHSDHVDPYPYLASWGIS REQFKQDIENGLSAATGWQKNGTGYWYVHSDGSYPKDKFEKINGTWYYFDGSGYMLSD RWKKHTDGNWYYFDQSGEMATGWKKIADKWYYFDVEGAMKTGWVKYKDTWYYLDAKEG AMVSNAFVQSADGTGWYYLKPDGTLADKPEFTVEPDGLITVK" gene complement(1486..1821) /locus_tag="phiARI0831_2" CDS complement(1486..1821) /locus_tag="phiARI0831_2" /codon_start=1 /transl_table=11 /product="holin_LLH domain protein" /protein_id="ALH47226.1" /translation="MQQITEIITNGAISTLVILAGVVVRAVKDYLVQKGGEKTIKIVE ILAKNAVHAVEQVAAETGYKGDEKLAQARAKVRAELTKYNISMTDRDLDTFVESAVKQ MNDTWGEGW" gene complement(2133..2483) /locus_tag="phiARI0831_3" CDS complement(2133..2483) /locus_tag="phiARI0831_3" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="ALH47227.1" /translation="MAETIQNTDNLLDLTKITEPFDLASALRYMKENGEFIRCKNVSD DFYMYRDVQKRPVIVNGRRQFKDVETVWAFNQWGGTITTINVAVLLNHEFYIMKFDAE GNPDWTVPTVEPKE" gene complement(2486..2689) /locus_tag="phiARI0831_4" CDS complement(2486..2689) /locus_tag="phiARI0831_4" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="ALH47228.1" /translation="MNTEQLNQALQMTIREMSTTSTDSMITSNILSIQLNEQREENQR LQARVDELEALLDEQTKPADKGE" gene complement(2783..>7308) /locus_tag="phiARI0831_5" CDS complement(2783..>7308) /locus_tag="phiARI0831_5" /codon_start=3 /transl_table=11 /product="putative antireceptor protein" /protein_id="ALH47229.1" /translation="SKIASVQASGRNLFLNSLFKQDISKTGIWTTSTYTATIDSESKY LGHKALKIIGLNPSGRDGGNPKVTYPALGQFGKVIPGSTTNQDVTISFYAKANKNGIT LRSRLGNIGYKTGNVTLSTEIKRYVVHIPKGWTNESKQTTNEWLFNFNQEGTVWIWMP KFEISDVDTSYSEAPEDIEGQISTVESTFKQRANSLDAGVRSLTEGLRTKVDISALNV TAENIRQSVKSLETDTQNKLNQKLSQAEFEVRAGSIRQEILNATKDKASKSELTQTAE ELSSKIASVQVGGINLLRNTASLLIGDRSKGCWMSASGGNGRAISVEVLDPPKKMIKN MIRVIENTNGGNKDLTQLVRLRIGEKYTISCYARIASDSPNANVNLLFRSWANNTDLN RKFQKSISHKNWQKYSFTFTADAIENSIQFGQSGAGIIEICAPKIESGTLATDYSEAP EDIEGQISTVESTFKQRANSLDAGVSRLTEGLRTKVDISALNVTAENIRQSVKSLETD TQNKLNQKLSQAEFEVRAGSIRQEILNATKDKADKTLVVSEAGKLREEFSKMKVGGRN LWIKSKTVGAVIEKLPENHVTGQKECYRLENNSTLTFNLEPDFSSRLYQKVTFSAWIK YENVVQGRNFWNVFNCFKHYLFRKNSETGVQSGPDYATLGMYKGSADWKYITFTYDYS EKTNFDQLKTSLRFNLEGATSGTAWVTGIKVEIGSVATDWSPAPEDADGLITEAKATF ERTAQGLRTDLLAIQEYVNKDGQRQEALQRYTREESTRQATAVRELVNRDFVGKATYQ EDVKGINQRIEAVKTSANKDIASQIASYRQSVDGKFTDISSQITTYKQDVGGQISGLS NRLTSSEQGTTTQISNISNRINSNKQGTDNQISNLKTQVATNKDNAERQMGRISDQVS ANKANADSQFANVTNQLARKVETTDFQRVKETSKLYERILGNTENGIADKVARMALTN QLFQVEVAKNASNGQNLLKGTKDFSGGWKNKGANWKKHAEKYKGVDVLFKNNSWNGVG QEIDAKIGEVYTFSLWMKSDWKNDTVNFYVNRNGSVEKGWGVPSETSVAITSEWKRYS FTFKITVDGFIFPRVERLNQNTNLYIAGLKLEKGSYATPYTEAPEDTDEAIRSVQSQL TGSWAVQNINSAGDIISGINLGANGHNRFVGKLTHITGETLIDRAVIKSAMVDKLKTG NFEAGSVTTTILEAEAVTAEKLKVDNALIKKLTATDAFIDQLISKRIFSTKVESVISS STFLEAYQGRIGGFTLGQFDQGGGRWISGVNQFSVGMGNGAGHGVRTAFWANWGNNWN YAGPKAWNVNTDGKMYCRNEVGFYDQVDFSNSSRANFYGNTTFSRSPVFSNGIELGSK DVLGDGWNPKGGRNAVVWWNQVGSGSVKYWMEQKSDRRLKENITDTAVKALDKINRLR MVAFDFIENKKHEEIGLIAQEAETIVPRIVSRDPENPDGYLHIDYTALVPYLIKAIQE LNQKIEKMEKTIA" ORIGIN 1 aatcaaggat agtaaaattc tcactctttt ctatctcata catccttacc gaatgcaaca 61 cgagatcacg atacttccaa gtgctgacca gatactcaat aacctcttgg tcctctatcc 121 tgcattccat aagtaataat agcttgaccg tgtattcatt cttcaaaatc ggaacctgat 181 aagtcacatc tacccaatgc tcaaaaccta agtctgtctg ctctacattt gctagttcaa 241 tatttaaaat cttcattttt attcctccta cttatctatt cgtaaaagaa gataaaaagt 301 tatgaaaaaa tcactatttt tttattttta acaaaacacc gtttttgaca ataatcaaaa 361 aataaaaagg agctattatt aacaaaatgg cgtttttgac aataataccc tgccattcct 421 cctccctatt cttcaagaaa acgctttttt gaagaatcag agcaaacaaa aaaaccgcaa 481 gcctgagcct gcggtgaaag aacaatttag aaagtttcct ttctatttat ttaactgtaa 541 tcaagccatc tggctctact gtgaactctg gcttgtctgc cagtgttccg tctggtttga 601 ggtagtacca gcctgttccg tctgcggact ggacgaaggc gtttgatacc atagcgcctt 661 ctttagcatc taagtagtac caagtgtcct tgtacttgac ccagcctgtc ttcatggcac 721 cttctacatc aaaatagtac cacttgtcag cgattttctt ccagcctgtg gccatttcgc 781 ctgattggtc aaagtagtac caattaccgt ctgtgtgctt cttccagcgg tctgaaagca 841 tatagcctga gccatcgaaa taataccagg taccgttgat tttctcaaac ttatcttttg 901 gataagagcc gtctgagtgt acgtaccagt agccagtgcc atttttctgc cagcctgttg 961 cagcgctcaa gccgttttcg atgtcttgct taaactgttc acggctaatg ccccaacttg 1021 caagatatgg atatggatcc acatggtctg agtggttgtt tggttggtta ttggtacagt 1081 attcatgcgt cttgatacct tccaagtcgt ctgtatcaag agtcttcggc aagcctgctt 1141 cgtccgctag attgcgtagc aattcgatat agaggcgata gtcagccata aactcttctt 1201 tagttgaatg gctttcaatc agttcaaccg ctgcgtaact ctcagtattc caaccgcccc 1261 caacatccca acttccgttg ttcacaggac ctacttgcat gacacgacca tttccaacca 1321 catgagagaa gaaccctagt tcagggtcct ttctatagtg gtaatcaacc tcattttgag 1381 ctgttgagtt acggttgcct gttgagtgag catgtatttg acgatagggt tgcacaccga 1441 cctgaggcaa tccacttctc aatctgcttg tgtcaatgtc catttttacc atccttcccc 1501 ccaagtatca ttcatctgct taaccgctga ctcgacaaat gtgtcgaggt cacggtcagt 1561 catgctgatg ttatatttgg tcagctcagc acggacttta gcgcgagcct gtgccagttt 1621 ttcatctccc ttgtagccag tttcagcagc tacctgctcc acggcatgaa ctgcattttt 1681 ggccaagatt tcaacgattt tgatggtctt ttctccacct ttttgaacca ggtagtcctt 1741 gactgcccta actacaaccc ctgccaaaat gactagggtg ctgattgctc cattagtaat 1801 gatttcagta atttgttgca tttgttattc tcctttttcg atttcttcca tgcggtcgtt 1861 catgcgaacc atttcttttt gaatgtctcc gaccgtgtga gtgattgtgg ttaattctgt 1921 agtggtcttt tctaggtgag tcatcaaacg ctcttctcgt ctattagagt cggcctttga 1981 ttgctcgtgc aaatccataa tcttcttctc tcgcttgtcc gaagtcttga taagatatcg 2041 aatgataata aaaaaaagca agataaacaa aatcgcccaa gctacctgac tttgagcgat 2101 tttttcagct tcttcaattg gcatacaacc tcctattctt taggttctac cgttggaacc 2161 gtccagtcag gattgccctc tgcatcaaat ttcatgatat agaattcatg attcaacaga 2221 acggctacgt tgattgttgt gattgtacca ccccactggt tgaacgccca aacagtttca 2281 acatccttga attggcgacg gccatttacg atcacaggac gtttttgaac atcacgatac 2341 atatagaagt catcgcttac attcttgcaa cgaatgaact ctccattttc tttcatgtag 2401 cgcaaagcgc tcgcaagatc aaatggttct gtgatttttg taaggtctag taagttatct 2461 gtgttttgaa ttgtttctgc catgtctatt ctcctttgtc tgctggttta gtttgttcat 2521 caagcagagc ttccagctca tccactcgtg cttgaagtct ttgattctct tccctttgct 2581 cattcaactg aatactcaag atattacttg taatcatcga atctgttgaa gttgttgaca 2641 tttcacgaat tgtcatttgt aaggcttggt taagctgttc tgtgttcatt ttctaagttc 2701 tccaatctgt gtgttcgttt tctattttca agagcaagct cctaaattgc tttaagtgcg 2761 atattggtca acatgttgtt attcatgcta ttgttttctc cattttttct attttttgat 2821 ttaattcttg aatagccttg attaagtaag gaactaaagc ggtatagtcg atatgcagat 2881 agccatctgg attctcagga tctcgtgaga caattcttgg aacgatggtt tcagcctctt 2941 gagctattag accaatctcc tcatgtttct tattttcgat gaaatcaaat gcaaccattc 3001 ttaatctgtt gattttatcc aaggctttca cagctgtatc tgtgatgttc tcttttaagc 3061 gtctgtctga tttttgttcc atccaatact tcacgctacc gctaccgacc tgattccacc 3121 aaacaaccgc attccttccg cctttgggat tccaaccatc accaagcaca tctttacttc 3181 caagttcgat accatttgaa aacacaggag aacgagaaaa agtagtattc ccatagaagt 3241 ttgctctcga tgaattcgaa aaatccactt gatcataaaa accgacttca ttcctacagt 3301 acattttccc atcagtattg acgttccatg ctttaggtcc ggcatagttc caattatttc 3361 cccagttcgc ccagaaggct gtccggactc catgcccggc accattcccc ataccaacag 3421 agaactgatt gacacctgaa atccagcgac cgccaccctg gtcaaattga ccaagtgtga 3481 atccaccaat tcgaccttga taggcttcta ggaaggttga actagaaatg acggactcaa 3541 ccttagtaga gaagatacgt ttagatatca gttggtcaat aaaagcatca gttgcagtta 3601 attttttaat aagcgcattg tcaactttca acttctcagc agttaccgct tcagcttcta 3661 atatcgtagt cgtgaccgaa ccagcttcaa aattgcccgt tttcagctta tcaaccatgg 3721 cagacttgat gactgctctg tcaatcaggg tctctccagt gatgtgggtc aatttcccaa 3781 cgaagcggtt atgtccattg gcgccaagat tgattccaga gatgatatct ccagccgagt 3841 tgatgttttg aactgcccat gagccagtta gttggctttg aacagagcga atcgcttcgt 3901 ccgtgtcttc aggagcttcg gtgtacggtg ttgcatacga tcctttttca agtttaagac 3961 ctgcaatata tagatttgta ttttgattaa gtcgttctac acgaggaaag atgaagccgt 4021 ccacagtaat tttgaaggta aatgagtaac gtttccattc acttgttata gcgaccgatg 4081 tttcagatgg aacaccccaa cctttctcaa cagatccatt tctatttaca tagaaattta 4141 ctgtatcatt cttccagtcg ctcttcatcc ataagctgaa tgtatagact tcaccaattt 4201 ttgcatcaat ctcttgtcca acgccattcc acgaattatt tttaaatagg acatcaacac 4261 ctttgtattt ttcagcgtgc tttttccaat ttgcaccctt gtttttccaa ccccctgaga 4321 agtcttttgt gcctttcaac aaattttgac cattgctggc atttttagcc acctcaacct 4381 gaaacagttg attagtcaga gccatgcgag caaccttatc cgcaattcca ttttcagtat 4441 tgcccaaaat tcgctcgtaa agtttactgg tttccttaac acgctggaag tcagtagtct 4501 ctacttttcg cgctagttga ttggtcacat tcgcaaattg actatcagca ttcgctttgt 4561 ttgcagaaac ctgatcagat attctaccca tttgtcgttc agcattatcc ttgtttgtag 4621 cgacctgagt ctttaaattt gaaatctgat tatctgtgcc ttgcttatta ctgtttatcc 4681 gatttgaaat atttgaaatc tgagtagtgg ttccttgctc actgcttgta agtctatttg 4741 atagaccact gatttgaccg cccacatctt gcttataagt agttatctga cttgaaatat 4801 ccgtgaactt accatctaca gattgacgat agctagcgat ttgactagcg atgtctttat 4861 tcgcactagt tttaacagct tcaatcctct gattgatacc cttaacatct tcttgataag 4921 tagccttacc aacgaaatca cgattgacca gctcacggac tgctgtcgct tgtctcgtgc 4981 tctcctcacg agtatagcgc tgtagggctt cctgtcgctg accgtcttta tttacatatt 5041 cctgaatagc taataagtcg gttcgcaagc cctgagctgt ccgctcaaag gtagccttag 5101 cctcagtgat gagaccatca gcgtcctcag gcgcaggact ccagtccgtc gccacactac 5161 caatttcaac cttgattcct gttacccaag ctgtaccgct tgtagcacct tcaagattga 5221 atcgcaatga tgtcttcaat tgatcaaaat ttgttttttc agagtagtca taagtgaatg 5281 taatatattt ccaatctgcc gaacctttat acataccaag cgtagcataa tctggaccac 5341 tctgtactcc ggtctcacta ttttttctaa aaagataatg tttgaagcaa ttaaatacat 5401 tccaaaaatt tcgaccttgg actacatttt cgtacttgat ccaagcgcta aaagtaactt 5461 tttggtacaa ccttgagctg aaatctggtt caaggttgaa cgttaaagta gagttgttct 5521 ctagcctata gcattctttt tgacctgtga cgtggttttc aggtaatttt tcaattacag 5581 ctccaaccgt cttggatttt atccatagat tccgtcctcc caccttcatt tttgaaaatt 5641 cttcacgcaa tttcccagct tcagatacaa ctaaagtctt atctgcttta tccttggttg 5701 cgttcaggat ttcctgacgg atagagccag ctcgcacctc aaattcagcc tgactcaact 5761 tctgatttag tttgttctgc gtgtctgtct caagactctt caccgactgc ctaatatttt 5821 cagcagtcac gttgagtgcg ctgatatcca ctttagttct aagaccttca gtcagacggc 5881 ttacaccagc gtcgagtgag ttggctcgtt gtttgaaggt cgattcaact gttgaaatct 5941 gaccttctat atcttcagga gcttcgctgt aatcagtcgc taacgttcct gattcgattt 6001 tcggagcgca tatttcgata attcctgcgc cagattgtcc aaattgaatt gaattttcaa 6061 ttgcatcagc agtaaatgta aatgaatatt tttgccaatt tttatgagag atggatttct 6121 gaaatttgcg atttaaatcg gtattatttg cccacgaacg aaatagcaag ttcacgtttg 6181 catttgggct atcgctagca atccttgcat aacaagaaat cgtgtacttt tcaccaattc 6241 gcaatctaac aagttgagtt aaatctttat ttccaccatt cgtattttca ataacacgaa 6301 tcatgttttt tatcattttt ttgggaggat ccaaaacttc tacgctaatc gctcgcccat 6361 ttcctccgct tgcactcatc caacatcctt ttgaacgatc gccaatcaac aaactcgcag 6421 tattacgcaa gaggttgatt cctccgacct gcacactcgc tatcttacta gagagctcct 6481 cagctgtctg cgtaagttct gacttgctgg ctttatcctt ggttgcgttc aggatttcct 6541 gacgtataga gccggctcgc acctcaaatt cagcctgact caacttctga tttagcttgt 6601 tctgcgtgtc tgtctcaaga ctcttcacag attgccggat attttcagca gtcacgttga 6661 gtgcgctgat atccactttg gttctaagcc cttcagtcaa gcttcttaca ccagcgtcga 6721 gcgagttggc tcgttgtttg aaggtcgatt caactgttga aatctgacct tctatatctt 6781 caggagcttc tgaataagaa gtatctacat cgcttatttc aaacttcggc atccaaatcc 6841 aaacggttcc ttcctggttg aaattgaaca accattcatt tgtggtctgc ttggattcgt 6901 ttgtccaacc ttttggaata tggacaacat atcgtttaat ttctgtcgac aatgtcacat 6961 ttccagtttt atatccgata ttccctaatc gagatcttag cgttattcca tttttatttg 7021 ccttagcata aaaactaatg gttacatctt gattagtcgt acttccggga attactttcc 7081 cgaattgacc cagagctgga taagtaacct tgggattccc tccatcacgg ccagatggat 7141 tcagacctat aattttaaga gccttgtgtc caagatactt actttcgcta tcgatagtag 7201 ccgtatatgt actcgttgtc caaattcctg tttttgaaat atcctgcttg aatagtgagt 7261 tcaagaatag atttcgaccg gatgcctgca cactcgctat cttactag //