##gff-version 3 #!gff-spec-version 1.21 #!processor NCBI annotwriter #!genome-build ASM260280v1 #!genome-build-accession NCBI_Assembly:GCA_002602805.1 ##sequence-region AP012536.1 1 57034 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1226259 AP012536.1 DDBJ region 1 57034 . + . ID=id0;Dbxref=taxon:1226259;gbkey=Src;genome=proviral;mol_type=genomic DNA;nat-host=Escherichia coli O157:H7 strain 1447 AP012536.1 DDBJ CDS 58 1344 . - 0 ID=cds0;Dbxref=NCBI_GP:BAT32379.1;Name=BAT32379.1;Note=Stx2ac_1447_01;gbkey=CDS;product=integrase;protein_id=BAT32379.1;transl_table=11 AP012536.1 DDBJ CDS 1378 1518 . - 0 ID=cds1;Dbxref=NCBI_GP:BAT32380.1;Name=BAT32380.1;Note=Stx2ac_1447_02;gbkey=CDS;product=excisionase;protein_id=BAT32380.1;transl_table=11 AP012536.1 DDBJ CDS 1647 1781 . - 0 ID=cds2;Dbxref=NCBI_GP:BAT32381.1;Name=BAT32381.1;Note=Stx2ac_1447_03;gbkey=CDS;product=hypothetical protein;protein_id=BAT32381.1;transl_table=11 AP012536.1 DDBJ CDS 1785 1943 . - 0 ID=cds3;Note=Stx2ac_1447_04%3B~hypothetical protein%2C partial (pseudogene);gbkey=CDS;pseudo=true;pseudogene=unitary;transl_table=11 AP012536.1 DDBJ CDS 2105 2911 . - 0 ID=cds4;Dbxref=NCBI_GP:BAT32382.1;Name=BAT32382.1;Note=Stx2ac_1447_05;gbkey=CDS;product=hypothetical protein;protein_id=BAT32382.1;transl_table=11 AP012536.1 DDBJ CDS 2908 3258 . - 0 ID=cds5;Dbxref=NCBI_GP:BAT32383.1;Name=BAT32383.1;Note=Stx2ac_1447_06;gbkey=CDS;product=hypothetical protein;protein_id=BAT32383.1;transl_table=11 AP012536.1 DDBJ CDS 3249 3785 . - 0 ID=cds6;Dbxref=NCBI_GP:BAT32384.1;Name=BAT32384.1;Note=Stx2ac_1447_07;gbkey=CDS;product=hypothetical protein;protein_id=BAT32384.1;transl_table=11 AP012536.1 DDBJ CDS 3913 4737 . - 0 ID=cds7;Dbxref=NCBI_GP:BAT32385.1;Name=BAT32385.1;Note=Stx2ac_1447_08;gbkey=CDS;product=hypothetical protein;protein_id=BAT32385.1;transl_table=11 AP012536.1 DDBJ CDS 4803 5165 . - 0 ID=cds8;Dbxref=NCBI_GP:BAT32386.1;Name=BAT32386.1;Note=Stx2ac_1447_09;gbkey=CDS;product=hypothetical protein;protein_id=BAT32386.1;transl_table=11 AP012536.1 DDBJ CDS 5944 6591 . - 0 ID=cds9;Dbxref=NCBI_GP:BAT32387.1;Name=BAT32387.1;Note=Stx2ac_1447_10;gbkey=CDS;product=repressor protein CI;protein_id=BAT32387.1;transl_table=11 AP012536.1 DDBJ CDS 6734 6994 . + 0 ID=cds10;Dbxref=NCBI_GP:BAT32388.1;Name=BAT32388.1;Note=Stx2ac_1447_11;gbkey=CDS;product=antirepressor protein Cro;protein_id=BAT32388.1;transl_table=11 AP012536.1 DDBJ CDS 6987 7538 . + 0 ID=cds11;Dbxref=NCBI_GP:BAT32389.1;Name=BAT32389.1;Note=Stx2ac_1447_12;gbkey=CDS;product=regulatory protein CII;protein_id=BAT32389.1;transl_table=11 AP012536.1 DDBJ CDS 7535 8686 . + 0 ID=cds12;Dbxref=NCBI_GP:BAT32390.1;Name=BAT32390.1;Note=Stx2ac_1447_13;gbkey=CDS;product=antirepressor;protein_id=BAT32390.1;transl_table=11 AP012536.1 DDBJ CDS 8683 8907 . + 0 ID=cds13;Dbxref=NCBI_GP:BAT32391.1;Name=BAT32391.1;Note=Stx2ac_1447_14;gbkey=CDS;product=hypothetical protein;protein_id=BAT32391.1;transl_table=11 AP012536.1 DDBJ CDS 8904 9722 . + 0 ID=cds14;Dbxref=NCBI_GP:BAT32392.1;Name=BAT32392.1;Note=Stx2ac_1447_15;gbkey=CDS;product=replication protein O;protein_id=BAT32392.1;transl_table=11 AP012536.1 DDBJ CDS 9725 10213 . + 0 ID=cds15;Dbxref=NCBI_GP:BAT32393.1;Name=BAT32393.1;Note=Stx2ac_1447_16;gbkey=CDS;product=hypothetical protein;protein_id=BAT32393.1;transl_table=11 AP012536.1 DDBJ CDS 10213 10866 . + 0 ID=cds16;Dbxref=NCBI_GP:BAT32394.1;Name=BAT32394.1;Note=Stx2ac_1447_17;gbkey=CDS;product=DNA N-6-adenine-methyltransferase;protein_id=BAT32394.1;transl_table=11 AP012536.1 DDBJ CDS 10863 11189 . + 0 ID=cds17;Dbxref=NCBI_GP:BAT32395.1;Name=BAT32395.1;Note=Stx2ac_1447_18;gbkey=CDS;product=repressor%2C lexA family;protein_id=BAT32395.1;transl_table=11 AP012536.1 DDBJ CDS 11186 11575 . + 0 ID=cds18;Dbxref=NCBI_GP:BAT32396.1;Name=BAT32396.1;Note=Stx2ac_1447_19;gbkey=CDS;product=crossover junction endodeoxyribonuclease;protein_id=BAT32396.1;transl_table=11 AP012536.1 DDBJ CDS 11595 12392 . + 0 ID=cds19;Dbxref=NCBI_GP:BAT32397.1;Name=BAT32397.1;Note=Stx2ac_1447_20;gbkey=CDS;product=KilA domain-containing protein;protein_id=BAT32397.1;transl_table=11 AP012536.1 DDBJ CDS 12400 13389 . + 0 ID=cds20;Dbxref=NCBI_GP:BAT32398.1;Name=BAT32398.1;Note=Stx2ac_1447_21;gbkey=CDS;product=hypothetical protein;protein_id=BAT32398.1;transl_table=11 AP012536.1 DDBJ CDS 13407 13748 . + 0 ID=cds21;Dbxref=NCBI_GP:BAT32399.1;Name=BAT32399.1;Note=Stx2ac_1447_22;gbkey=CDS;product=antitermination protein Q;protein_id=BAT32399.1;transl_table=11 AP012536.1 DDBJ CDS 13770 14309 . - 0 ID=cds22;Dbxref=NCBI_GP:BAT32400.1;Name=BAT32400.1;Note=Stx2ac_1447_23;gbkey=CDS;product=hypothetical protein;protein_id=BAT32400.1;transl_table=11 AP012536.1 DDBJ CDS 14302 15333 . - 0 ID=cds23;Dbxref=NCBI_GP:BAT32401.1;Name=BAT32401.1;Note=Stx2ac_1447_24;gbkey=CDS;product=hypothetical protein;protein_id=BAT32401.1;transl_table=11 AP012536.1 DDBJ CDS 15578 15775 . + 0 ID=cds24;Dbxref=NCBI_GP:BAT32402.1;Name=BAT32402.1;Note=Stx2ac_1447_25;gbkey=CDS;product=hypothetical protein;protein_id=BAT32402.1;transl_table=11 AP012536.1 DDBJ CDS 15926 16984 . + 0 ID=cds25;Dbxref=NCBI_GP:BAT32403.1;Name=BAT32403.1;Note=Stx2ac_1447_26;gbkey=CDS;product=DNA methylase;protein_id=BAT32403.1;transl_table=11 AP012536.1 DDBJ gene 17025 17100 . + . ID=gene0;Name=ileZ;gbkey=Gene;gene=ileZ;gene_biotype=tRNA AP012536.1 DDBJ tRNA 17025 17100 . + . ID=rna0;Parent=gene0;gbkey=tRNA;gene=ileZ;product=tRNA-Ile AP012536.1 DDBJ exon 17025 17100 . + . ID=id1;Parent=rna0;gbkey=tRNA;gene=ileZ;product=tRNA-Ile AP012536.1 DDBJ gene 17110 17186 . + . ID=gene1;Name=argN;gbkey=Gene;gene=argN;gene_biotype=tRNA AP012536.1 DDBJ tRNA 17110 17186 . + . ID=rna1;Parent=gene1;gbkey=tRNA;gene=argN;product=tRNA-Arg AP012536.1 DDBJ exon 17110 17186 . + . ID=id2;Parent=rna1;gbkey=tRNA;gene=argN;product=tRNA-Arg AP012536.1 DDBJ gene 17200 17276 . + . ID=gene2;Name=argO;gbkey=Gene;gene=argO;gene_biotype=tRNA AP012536.1 DDBJ tRNA 17200 17276 . + . ID=rna2;Parent=gene2;gbkey=tRNA;gene=argO;product=tRNA-Arg AP012536.1 DDBJ exon 17200 17276 . + . ID=id3;Parent=rna2;gbkey=tRNA;gene=argO;product=tRNA-Arg AP012536.1 DDBJ CDS 17368 18327 . + 0 ID=cds26;Dbxref=NCBI_GP:BAT32404.1;Name=BAT32404.1;Note=Stx2ac_1447_27;gbkey=CDS;product=shiga toxin 2 subunit A;protein_id=BAT32404.1;transl_table=11 AP012536.1 DDBJ CDS 18339 18608 . + 0 ID=cds27;Dbxref=NCBI_GP:BAT32405.1;Name=BAT32405.1;Note=Stx2ac_1447_28;gbkey=CDS;product=shiga toxin 2 subunit B;protein_id=BAT32405.1;transl_table=11 AP012536.1 DDBJ CDS 19473 21410 . + 0 ID=cds28;Dbxref=NCBI_GP:BAT32406.1;Name=BAT32406.1;Note=Stx2ac_1447_29;gbkey=CDS;product=hypothetical protein;protein_id=BAT32406.1;transl_table=11 AP012536.1 DDBJ CDS 21546 21725 . + 0 ID=cds29;Dbxref=NCBI_GP:BAT32407.1;Name=BAT32407.1;Note=Stx2ac_1447_30;gbkey=CDS;product=hypothetical protein;protein_id=BAT32407.1;transl_table=11 AP012536.1 DDBJ CDS 21766 22038 . + 0 ID=cds30;Dbxref=NCBI_GP:BAT32408.1;Name=BAT32408.1;Note=Stx2ac_1447_31;gbkey=CDS;product=hypothetical protein;protein_id=BAT32408.1;transl_table=11 AP012536.1 DDBJ CDS 22115 22330 . + 0 ID=cds31;Dbxref=NCBI_GP:BAT32409.1;Name=BAT32409.1;Note=Stx2ac_1447_32;gbkey=CDS;product=holin protein;protein_id=BAT32409.1;transl_table=11 AP012536.1 DDBJ CDS 22335 22679 . + 0 ID=cds32;Dbxref=NCBI_GP:BAT32410.1;Name=BAT32410.1;Note=Stx2ac_1447_33;gbkey=CDS;product=hypothetical protein;protein_id=BAT32410.1;transl_table=11 AP012536.1 DDBJ CDS 22730 23260 . + 0 ID=cds33;Dbxref=NCBI_GP:BAT32411.1;Name=BAT32411.1;Note=Stx2ac_1447_34;gbkey=CDS;product=endolysin;protein_id=BAT32411.1;transl_table=11 AP012536.1 DDBJ CDS 23531 24100 . + 0 ID=cds34;Dbxref=NCBI_GP:BAT32412.1;Name=BAT32412.1;Note=Stx2ac_1447_35;gbkey=CDS;product=antirepressor protein;protein_id=BAT32412.1;transl_table=11 AP012536.1 DDBJ CDS 24100 24246 . + 0 ID=cds35;Dbxref=NCBI_GP:BAT32413.1;Name=BAT32413.1;Note=Stx2ac_1447_36;gbkey=CDS;product=hypothetical protein;protein_id=BAT32413.1;transl_table=11 AP012536.1 DDBJ CDS 24254 24721 . + 0 ID=cds36;Dbxref=NCBI_GP:BAT32414.1;Name=BAT32414.1;Note=Stx2ac_1447_37;gbkey=CDS;product=putative endopeptidase Rz;protein_id=BAT32414.1;transl_table=11 AP012536.1 DDBJ CDS 24474 24659 . + 0 ID=cds37;Dbxref=NCBI_GP:BAT32415.1;Name=BAT32415.1;Note=Stx2ac_1447_38;gbkey=CDS;product=lipoprotein Rz1 protein precursor;protein_id=BAT32415.1;transl_table=11 AP012536.1 DDBJ CDS 25084 25311 . - 0 ID=cds38;Dbxref=NCBI_GP:BAT32416.1;Name=BAT32416.1;Note=Stx2ac_1447_39;gbkey=CDS;product=hypothetical protein;protein_id=BAT32416.1;transl_table=11 AP012536.1 DDBJ CDS 25353 25718 . + 0 ID=cds39;Dbxref=NCBI_GP:BAT32417.1;Name=BAT32417.1;Note=Stx2ac_1447_40;gbkey=CDS;product=HNH endonuclease;protein_id=BAT32417.1;transl_table=11 AP012536.1 DDBJ CDS 26007 26570 . + 0 ID=cds40;Dbxref=NCBI_GP:BAT32418.1;Name=BAT32418.1;Note=Stx2ac_1447_41;gbkey=CDS;product=terminase small subunit;protein_id=BAT32418.1;transl_table=11 AP012536.1 DDBJ CDS 26567 28228 . + 0 ID=cds41;Dbxref=NCBI_GP:BAT32419.1;Name=BAT32419.1;Note=Stx2ac_1447_42;gbkey=CDS;product=terminase large subunit;protein_id=BAT32419.1;transl_table=11 AP012536.1 DDBJ CDS 28292 30229 . + 0 ID=cds42;Dbxref=NCBI_GP:BAT32420.1;Name=BAT32420.1;Note=Stx2ac_1447_43;gbkey=CDS;product=major head protein;protein_id=BAT32420.1;transl_table=11 AP012536.1 DDBJ CDS 30274 30495 . + 0 ID=cds43;Dbxref=NCBI_GP:BAT32421.1;Name=BAT32421.1;Note=Stx2ac_1447_44;gbkey=CDS;product=hypothetical protein;protein_id=BAT32421.1;transl_table=11 AP012536.1 DDBJ CDS 30441 31805 . + 0 ID=cds44;Dbxref=NCBI_GP:BAT32422.1;Name=BAT32422.1;Note=Stx2ac_1447_45;gbkey=CDS;product=portal protein;protein_id=BAT32422.1;transl_table=11 AP012536.1 DDBJ CDS 31802 33025 . + 0 ID=cds45;Dbxref=NCBI_GP:BAT32423.1;Name=BAT32423.1;Note=Stx2ac_1447_46;gbkey=CDS;product=portal protein;protein_id=BAT32423.1;transl_table=11 AP012536.1 DDBJ CDS 33022 33348 . + 0 ID=cds46;Dbxref=NCBI_GP:BAT32424.1;Name=BAT32424.1;Note=Stx2ac_1447_47;gbkey=CDS;product=hypothetical protein;protein_id=BAT32424.1;transl_table=11 AP012536.1 DDBJ CDS 33359 33709 . + 0 ID=cds47;Dbxref=NCBI_GP:BAT32425.1;Name=BAT32425.1;Note=Stx2ac_1447_48;gbkey=CDS;product=bacteriophage head-tail adaptor;protein_id=BAT32425.1;transl_table=11 AP012536.1 DDBJ CDS 33706 34152 . + 0 ID=cds48;Dbxref=NCBI_GP:BAT32426.1;Name=BAT32426.1;Note=Stx2ac_1447_49;gbkey=CDS;product=minor tail protein;protein_id=BAT32426.1;transl_table=11 AP012536.1 DDBJ CDS 34149 34493 . + 0 ID=cds49;Dbxref=NCBI_GP:BAT32427.1;Name=BAT32427.1;Note=Stx2ac_1447_50;gbkey=CDS;product=hypothetical protein;protein_id=BAT32427.1;transl_table=11 AP012536.1 DDBJ CDS 34552 35268 . + 0 ID=cds50;Dbxref=NCBI_GP:BAT32428.1;Name=BAT32428.1;Note=Stx2ac_1447_51;gbkey=CDS;product=major tail protein;protein_id=BAT32428.1;transl_table=11 AP012536.1 DDBJ CDS 35274 35648 . + 0 ID=cds51;Dbxref=NCBI_GP:BAT32429.1;Name=BAT32429.1;Note=Stx2ac_1447_52;gbkey=CDS;product=tail assembly protein;protein_id=BAT32429.1;transl_table=11 AP012536.1 DDBJ CDS 35672 35953 . + 0 ID=cds52;Dbxref=NCBI_GP:BAT32430.1;Name=BAT32430.1;Note=Stx2ac_1447_53;gbkey=CDS;product=tail protein;protein_id=BAT32430.1;transl_table=11 AP012536.1 DDBJ CDS 36005 39247 . + 0 ID=cds53;Dbxref=NCBI_GP:BAT32431.1;Name=BAT32431.1;Note=Stx2ac_1447_54;gbkey=CDS;product=tail length tape measure protein;protein_id=BAT32431.1;transl_table=11 AP012536.1 DDBJ CDS 39240 39581 . + 0 ID=cds54;Dbxref=NCBI_GP:BAT32432.1;Name=BAT32432.1;Note=Stx2ac_1447_55;gbkey=CDS;product=minor tail protein;protein_id=BAT32432.1;transl_table=11 AP012536.1 DDBJ CDS 39581 40279 . + 0 ID=cds55;Dbxref=NCBI_GP:BAT32433.1;Name=BAT32433.1;Note=Stx2ac_1447_56;gbkey=CDS;product=phage minor tail protein L;protein_id=BAT32433.1;transl_table=11 AP012536.1 DDBJ CDS 40290 41033 . + 0 ID=cds56;Dbxref=NCBI_GP:BAT32434.1;Name=BAT32434.1;Note=Stx2ac_1447_57;gbkey=CDS;product=tail assembly protein;protein_id=BAT32434.1;transl_table=11 AP012536.1 DDBJ CDS 40931 41611 . + 0 ID=cds57;Dbxref=NCBI_GP:BAT32435.1;Name=BAT32435.1;Note=Stx2ac_1447_58;gbkey=CDS;product=tail assembly protein;protein_id=BAT32435.1;transl_table=11 AP012536.1 DDBJ CDS 41869 43407 . - 0 ID=cds58;Dbxref=NCBI_GP:BAT32436.1;Name=BAT32436.1;Note=Stx2ac_1447_59;gbkey=CDS;product=transposase%2C IS66 family;protein_id=BAT32436.1;transl_table=11 AP012536.1 DDBJ CDS 43456 43803 . - 0 ID=cds59;Dbxref=NCBI_GP:BAT32437.1;Name=BAT32437.1;Note=Stx2ac_1447_60;gbkey=CDS;product=transposase%2C IS66 family;protein_id=BAT32437.1;transl_table=11 AP012536.1 DDBJ CDS 43800 44204 . - 0 ID=cds60;Dbxref=NCBI_GP:BAT32438.1;Name=BAT32438.1;Note=Stx2ac_1447_61;gbkey=CDS;product=transposase%2C IS66 family;protein_id=BAT32438.1;transl_table=11 AP012536.1 DDBJ CDS 44318 47791 . + 0 ID=cds61;Dbxref=NCBI_GP:BAT32439.1;Name=BAT32439.1;Note=Stx2ac_1447_62;gbkey=CDS;product=host specificity protein;protein_id=BAT32439.1;transl_table=11 AP012536.1 DDBJ CDS 47858 48457 . + 0 ID=cds62;Dbxref=NCBI_GP:BAT32440.1;Name=BAT32440.1;Note=Stx2ac_1447_63;gbkey=CDS;product=outer membrane protein Lom precursor;protein_id=BAT32440.1;transl_table=11 AP012536.1 DDBJ CDS 48522 49835 . + 0 ID=cds63;Dbxref=NCBI_GP:BAT32441.1;Name=BAT32441.1;Note=Stx2ac_1447_64;gbkey=CDS;product=tail fiber protein;protein_id=BAT32441.1;transl_table=11 AP012536.1 DDBJ CDS 49837 50106 . + 0 ID=cds64;Dbxref=NCBI_GP:BAT32442.1;Name=BAT32442.1;Note=Stx2ac_1447_65;gbkey=CDS;product=hypothetical protein;protein_id=BAT32442.1;transl_table=11 AP012536.1 DDBJ CDS 50218 50397 . + 0 ID=cds65;Note=Stx2ac_1447_66%3B~T3SS secreted effector NleI/NleG homolog%2C interrapted by IS insertion%2C N-terminal part;gbkey=CDS;pseudo=true;pseudogene=unitary;transl_table=11 AP012536.1 DDBJ CDS 50473 50834 . + 0 ID=cds66;Note=Stx2ac_1447_67%3B~insertion sequence 2 OrfA protein (pseudogene);gbkey=CDS;pseudo=true;pseudogene=unitary;transl_table=11 AP012536.1 DDBJ CDS 50858 51697 . + 0 ID=cds67;Note=Stx2ac_1447_68%3B~insertion sequence 2 OrfB protein (pseudogene);gbkey=CDS;pseudo=true;pseudogene=unitary;transl_table=11 AP012536.1 DDBJ CDS 51724 52122 . + 0 ID=cds68;Note=Stx2ac_1447_69%3B~T3SS secreted effector NleI/NleG homolog%2C interrapted by IS insertion%2C C-terminal part;gbkey=CDS;pseudo=true;pseudogene=unitary;transl_table=11 AP012536.1 DDBJ CDS 52300 55686 . - 0 ID=cds69;Dbxref=NCBI_GP:BAT32443.1;Name=BAT32443.1;Note=Stx2ac_1447_70;gbkey=CDS;product=T3SS effector protein EspN;protein_id=BAT32443.1;transl_table=11 AP012536.1 DDBJ CDS 56081 56476 . + 0 ID=cds70;Note=Stx2ac_1447_71%3B~transposase%2C prtial;gbkey=CDS;pseudo=true;pseudogene=unitary;transl_table=11 AP012536.1 DDBJ CDS 56577 56792 . + 0 ID=cds71;Note=Stx2ac_1447_72%3B~transposase%2C prtial;gbkey=CDS;pseudo=true;pseudogene=unitary;transl_table=11 ###