locus-tag class description FJR47_00010 PF00308 Bacterial dnaA protein FJR47_00010 PF08299 Bacterial dnaA protein helix-turn-helix FJR47_00010 PF11638 DnaA N-terminal domain FJR47_00015 PF00712 DNA polymerase III beta subunit, N-terminal domain FJR47_00015 PF02767 DNA polymerase III beta subunit, central domain FJR47_00015 PF02768 DNA polymerase III beta subunit, C-terminal domain FJR47_00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FJR47_00020 PF01751 Toprim domain FJR47_00020 PF00204 DNA gyrase B FJR47_00020 PF00986 DNA gyrase B subunit, carboxyl terminus FJR47_00025 PF00563 EAL domain FJR47_00025 PF00990 Diguanylate cyclase, GGDEF domain FJR47_00025 PF08447 PAS fold FJR47_00025 PF08448 PAS fold FJR47_00030 PF14489 QueF-like protein FJR47_00035 PF12627 Probable RNA and SrmB- binding site of polymerase A FJR47_00035 PF01966 HD domain FJR47_00035 PF01743 Poly A polymerase head domain FJR47_00040 PF00009 Elongation factor Tu GTP binding domain FJR47_00040 PF03144 Elongation factor Tu domain 2 FJR47_00040 PF00679 Elongation factor G C-terminus FJR47_00050 PF01625 Peptide methionine sulfoxide reductase FJR47_00055 PF00268 Ribonucleotide reductase, small chain FJR47_00060 PF00795 Carbon-nitrogen hydrolase FJR47_00085 PF01966 HD domain FJR47_00085 PF13286 Phosphohydrolase-associated domain FJR47_00090 PF02899 Phage integrase, N-terminal SAM-like domain FJR47_00090 PF00589 Phage integrase family FJR47_00115 PF01165 Ribosomal protein S21 FJR47_00130 PF01807 CHC2 zinc finger FJR47_00130 PF08275 DNA primase catalytic core, N-terminal domain FJR47_00130 PF13662 Toprim domain FJR47_00130 PF16730 DnaG-primase C-terminal, helicase-binding domain FJR47_00140 PF00270 DEAD/DEAH box helicase FJR47_00140 PF00271 Helicase conserved C-terminal domain FJR47_00150 PF02222 ATP-grasp domain FJR47_00155 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FJR47_00155 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FJR47_00165 PF02910 Fumarate reductase flavoprotein C-term FJR47_00165 PF00890 FAD binding domain FJR47_00170 PF13085 2Fe-2S iron-sulfur cluster binding domain FJR47_00170 PF13183 4Fe-4S dicluster domain FJR47_00175 PF04461 Protein of unknown function (DUF520) FJR47_00205 PF12832 MFS_1 like family FJR47_00215 PF00924 Mechanosensitive ion channel FJR47_00215 PF05552 Conserved TM helix FJR47_00265 PF00689 Cation transporting ATPase, C-terminus FJR47_00265 PF00690 Cation transporter/ATPase, N-terminus FJR47_00270 PF07715 TonB-dependent Receptor Plug Domain FJR47_00270 PF00593 TonB dependent receptor FJR47_00280 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain FJR47_00280 PF00391 PEP-utilising enzyme, mobile domain FJR47_00280 PF02896 PEP-utilising enzyme, TIM barrel domain FJR47_00285 PF00224 Pyruvate kinase, barrel domain FJR47_00285 PF02887 Pyruvate kinase, alpha/beta domain FJR47_00285 PF00391 PEP-utilising enzyme, mobile domain FJR47_00290 PF07690 Major Facilitator Superfamily FJR47_00295 PF00248 Aldo/keto reductase family FJR47_00305 PF00871 Acetokinase family FJR47_00310 PF07085 DRTGG domain FJR47_00310 PF01515 Phosphate acetyl/butaryl transferase FJR47_00340 PF00873 AcrB/AcrD/AcrF family FJR47_00345 PF08148 DSHCT (NUC185) domain FJR47_00345 PF00270 DEAD/DEAH box helicase FJR47_00345 PF00271 Helicase conserved C-terminal domain FJR47_00360 PF03062 MBOAT, membrane-bound O-acyltransferase family FJR47_00375 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FJR47_00395 PF02567 Phenazine biosynthesis-like protein FJR47_00400 PF00905 Penicillin binding protein transpeptidase domain FJR47_00440 PF02001 Protein of unknown function DUF134 FJR47_00450 PF12794 Mechanosensitive ion channel inner membrane domain 1 FJR47_00450 PF12795 Mechanosensitive ion channel porin domain FJR47_00450 PF00924 Mechanosensitive ion channel FJR47_00460 PF01451 Low molecular weight phosphotyrosine protein phosphatase FJR47_00485 PF01966 HD domain FJR47_00490 PF02562 PhoH-like protein FJR47_00490 PF13638 PIN domain FJR47_00500 PF18381 YcaO cyclodehydratase C-terminal domain FJR47_00500 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding FJR47_00505 PF01032 FecCD transport family FJR47_00510 PF00005 ABC transporter FJR47_00515 PF01497 Periplasmic binding protein FJR47_00530 PF00563 EAL domain FJR47_00530 PF00990 Diguanylate cyclase, GGDEF domain FJR47_00530 PF03707 Bacterial signalling protein N terminal repeat FJR47_00535 PF00563 EAL domain FJR47_00535 PF00990 Diguanylate cyclase, GGDEF domain FJR47_00535 PF03707 Bacterial signalling protein N terminal repeat FJR47_00550 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain FJR47_00550 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase FJR47_00550 PF13288 DXP reductoisomerase C-terminal domain FJR47_00555 PF00814 Glycoprotease family FJR47_00560 PF08534 Redoxin FJR47_00575 PF16921 Tex protein YqgF-like domain FJR47_00575 PF09371 Tex-like protein N-terminal domain FJR47_00575 PF00575 S1 RNA binding domain FJR47_00575 PF17674 HHH domain FJR47_00585 PF02687 FtsX-like permease family FJR47_00585 PF00005 ABC transporter FJR47_00585 PF12704 MacB-like periplasmic core domain FJR47_00590 PF12704 MacB-like periplasmic core domain FJR47_00590 PF00005 ABC transporter FJR47_00590 PF02687 FtsX-like permease family FJR47_00610 PF02646 RmuC family FJR47_00615 PF09962 Uncharacterized conserved protein (DUF2196) FJR47_00620 PF03880 DbpA RNA binding domain FJR47_00620 PF00270 DEAD/DEAH box helicase FJR47_00620 PF00271 Helicase conserved C-terminal domain FJR47_00625 PF01863 Protein of unknown function DUF45 FJR47_00630 PF00005 ABC transporter FJR47_00630 PF16326 ABC transporter C-terminal domain FJR47_00630 PF12848 ABC transporter FJR47_00640 PF00563 EAL domain FJR47_00640 PF01590 GAF domain FJR47_00640 PF00990 Diguanylate cyclase, GGDEF domain FJR47_00640 PF00360 Phytochrome region FJR47_00645 PF00749 tRNA synthetases class I (E and Q), catalytic domain FJR47_00665 PF00205 Thiamine pyrophosphate enzyme, central domain FJR47_00665 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FJR47_00665 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FJR47_00675 PF00501 AMP-binding enzyme FJR47_00675 PF14535 AMP-binding enzyme C-terminal domain FJR47_00695 PF01810 LysE type translocator FJR47_00710 PF00484 Carbonic anhydrase FJR47_00715 PF00733 Asparagine synthase FJR47_00715 PF13537 Glutamine amidotransferase domain FJR47_00725 PF07992 Pyridine nucleotide-disulphide oxidoreductase FJR47_00740 PF02254 TrkA-N domain FJR47_00740 PF02080 TrkA-C domain FJR47_00740 PF00999 Sodium/hydrogen exchanger family FJR47_00745 PF04055 Radical SAM superfamily FJR47_00745 PF06968 Biotin and Thiamin Synthesis associated domain FJR47_00755 PF01751 Toprim domain FJR47_00755 PF01131 DNA topoisomerase FJR47_00755 PF01396 Topoisomerase DNA binding C4 zinc finger FJR47_00780 PF01632 Ribosomal protein L35 FJR47_00785 PF00453 Ribosomal protein L20 FJR47_00790 PF16193 AAA C-terminal domain FJR47_00790 PF01661 Macro domain FJR47_00790 PF12002 MgsA AAA+ ATPase C terminal FJR47_00790 PF05496 Holliday junction DNA helicase RuvB P-loop domain FJR47_00795 PF01479 S4 domain FJR47_00795 PF00849 RNA pseudouridylate synthase FJR47_00800 PF01380 SIS domain FJR47_00800 PF00571 CBS domain FJR47_00805 PF03150 Di-haem cytochrome c peroxidase FJR47_00805 PF00034 Cytochrome c FJR47_00815 PF01256 Carbohydrate kinase FJR47_00815 PF03853 YjeF-related protein N-terminus FJR47_00820 PF05690 Thiazole biosynthesis protein ThiG FJR47_00825 PF01235 Sodium:alanine symporter family FJR47_00870 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain FJR47_00870 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain FJR47_00870 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain FJR47_00880 PF01370 NAD dependent epimerase/dehydratase family FJR47_00895 PF00483 Nucleotidyl transferase FJR47_00900 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase FJR47_00905 PF04321 RmlD substrate binding domain FJR47_00910 PF16363 GDP-mannose 4,6 dehydratase FJR47_00915 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family FJR47_00925 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FJR47_00925 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FJR47_00940 PF00535 Glycosyl transferase family 2 FJR47_01000 PF02397 Bacterial sugar transferase FJR47_01020 PF00390 Malic enzyme, N-terminal domain FJR47_01020 PF03949 Malic enzyme, NAD binding domain FJR47_01020 PF01515 Phosphate acetyl/butaryl transferase FJR47_01025 PF02621 Menaquinone biosynthesis FJR47_01035 PF02391 MoaE protein FJR47_01040 PF00994 Probable molybdopterin binding domain FJR47_01040 PF03454 MoeA C-terminal region (domain IV) FJR47_01040 PF03453 MoeA N-terminal region (domain I and II) FJR47_01045 PF01351 Ribonuclease HII FJR47_01055 PF00338 Ribosomal protein S10p/S20e FJR47_01060 PF00297 Ribosomal protein L3 FJR47_01065 PF00573 Ribosomal protein L4/L1 family FJR47_01070 PF00276 Ribosomal protein L23 FJR47_01075 PF00181 Ribosomal Proteins L2, RNA binding domain FJR47_01075 PF03947 Ribosomal Proteins L2, C-terminal domain FJR47_01080 PF00203 Ribosomal protein S19 FJR47_01085 PF00237 Ribosomal protein L22p/L17e FJR47_01090 PF07650 KH domain FJR47_01090 PF00189 Ribosomal protein S3, C-terminal domain FJR47_01095 PF00252 Ribosomal protein L16p/L10e FJR47_01100 PF00831 Ribosomal L29 protein FJR47_01105 PF00366 Ribosomal protein S17 FJR47_01110 PF00238 Ribosomal protein L14p/L23e FJR47_01115 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 FJR47_01115 PF00467 KOW motif FJR47_01120 PF00673 ribosomal L5P family C-terminus FJR47_01120 PF00281 Ribosomal protein L5 FJR47_01125 PF00253 Ribosomal protein S14p/S29e FJR47_01130 PF00410 Ribosomal protein S8 FJR47_01135 PF00347 Ribosomal protein L6 FJR47_01140 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast FJR47_01145 PF03719 Ribosomal protein S5, C-terminal domain FJR47_01145 PF00333 Ribosomal protein S5, N-terminal domain FJR47_01150 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A FJR47_01155 PF00344 SecY translocase FJR47_01160 PF00557 Metallopeptidase family M24 FJR47_01165 PF01176 Translation initiation factor 1A / IF-1 FJR47_01180 PF02040 Arsenical pump membrane protein FJR47_01185 PF01451 Low molecular weight phosphotyrosine protein phosphatase FJR47_01190 PF01022 Bacterial regulatory protein, arsR family FJR47_01205 PF00672 HAMP domain FJR47_01205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FJR47_01205 PF00512 His Kinase A (phospho-acceptor) domain FJR47_01210 PF00486 Transcriptional regulatory protein, C terminal FJR47_01210 PF00072 Response regulator receiver domain FJR47_01215 PF01219 Prokaryotic diacylglycerol kinase FJR47_01220 PF00884 Sulfatase FJR47_01225 PF00884 Sulfatase FJR47_01240 PF00444 Ribosomal protein L36 FJR47_01245 PF00416 Ribosomal protein S13/S18 FJR47_01250 PF00411 Ribosomal protein S11 FJR47_01255 PF00163 Ribosomal protein S4/S9 N-terminal domain FJR47_01255 PF01479 S4 domain FJR47_01260 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain FJR47_01260 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain FJR47_01260 PF01000 RNA polymerase Rpb3/RpoA insert domain FJR47_01265 PF01196 Ribosomal protein L17 FJR47_01275 PF01106 NifU-like domain FJR47_01285 PF02875 Mur ligase family, glutamate ligase domain FJR47_01285 PF08245 Mur ligase middle domain FJR47_01295 PF02261 Aspartate decarboxylase FJR47_01300 PF02575 YbaB/EbfC DNA-binding family FJR47_01305 PF00348 Polyprenyl synthetase FJR47_01310 PF02779 Transketolase, pyrimidine binding domain FJR47_01310 PF02780 Transketolase, C-terminal domain FJR47_01310 PF00456 Transketolase, thiamine diphosphate binding domain FJR47_01335 PF08032 RNA 2'-O ribose methyltransferase substrate binding FJR47_01335 PF00588 SpoU rRNA Methylase family FJR47_01340 PF13654 AAA domain FJR47_01340 PF05362 Lon protease (S16) C-terminal proteolytic domain FJR47_01355 PF03883 Peroxide stress protein YaaA FJR47_01380 PF03143 Elongation factor Tu C-terminal domain FJR47_01380 PF00009 Elongation factor Tu GTP binding domain FJR47_01380 PF03144 Elongation factor Tu domain 2 FJR47_01385 PF00471 Ribosomal protein L33 FJR47_01400 PF02357 Transcription termination factor nusG FJR47_01405 PF03946 Ribosomal protein L11, N-terminal domain FJR47_01405 PF00298 Ribosomal protein L11, RNA binding domain FJR47_01410 PF00687 Ribosomal protein L1p/L10e family FJR47_01415 PF00466 Ribosomal protein L10 FJR47_01420 PF16320 Ribosomal protein L7/L12 dimerisation domain FJR47_01420 PF00542 Ribosomal protein L7/L12 C-terminal domain FJR47_01425 PF04560 RNA polymerase Rpb2, domain 7 FJR47_01425 PF00562 RNA polymerase Rpb2, domain 6 FJR47_01425 PF10385 RNA polymerase beta subunit external 1 domain FJR47_01425 PF04565 RNA polymerase Rpb2, domain 3 FJR47_01425 PF04561 RNA polymerase Rpb2, domain 2 FJR47_01425 PF04563 RNA polymerase beta subunit FJR47_01430 PF04998 RNA polymerase Rpb1, domain 5 FJR47_01430 PF05000 RNA polymerase Rpb1, domain 4 FJR47_01430 PF04983 RNA polymerase Rpb1, domain 3 FJR47_01430 PF00623 RNA polymerase Rpb1, domain 2 FJR47_01430 PF04997 RNA polymerase Rpb1, domain 1 FJR47_01435 PF00164 Ribosomal protein S12/S23 FJR47_01440 PF00177 Ribosomal protein S7p/S5e FJR47_01445 PF00679 Elongation factor G C-terminus FJR47_01445 PF14492 Elongation Factor G, domain II FJR47_01445 PF00009 Elongation factor Tu GTP binding domain FJR47_01445 PF03144 Elongation factor Tu domain 2 FJR47_01445 PF03764 Elongation factor G, domain IV FJR47_01455 PF00593 TonB dependent receptor FJR47_01455 PF07715 TonB-dependent Receptor Plug Domain FJR47_01470 PF04377 Arginine-tRNA-protein transferase, C terminus FJR47_01470 PF04376 Arginine-tRNA-protein transferase, N terminus FJR47_01475 PF03462 PCRF domain FJR47_01475 PF00472 RF-1 domain FJR47_01480 PF02569 Pantoate-beta-alanine ligase FJR47_01495 PF07963 Prokaryotic N-terminal methylation motif FJR47_01495 PF00114 Pilin (bacterial filament) FJR47_01500 PF00271 Helicase conserved C-terminal domain FJR47_01500 PF18074 Primosomal protein N C-terminal domain FJR47_01500 PF18319 PriA DNA helicase Cys-rich region (CRR) domain FJR47_01500 PF00270 DEAD/DEAH box helicase FJR47_01505 PF00293 NUDIX domain FJR47_01510 PF01476 LysM domain FJR47_01510 PF08525 Opacity-associated protein A N-terminal motif FJR47_01510 PF01551 Peptidase family M23 FJR47_01520 PF01565 FAD binding domain FJR47_01520 PF02913 FAD linked oxidases, C-terminal domain FJR47_01525 PF03631 Virulence factor BrkB FJR47_01530 PF00753 Metallo-beta-lactamase superfamily FJR47_01530 PF13567 Domain of unknown function (DUF4131) FJR47_01530 PF03772 Competence protein FJR47_01535 PF03796 DnaB-like helicase C terminal domain FJR47_01535 PF00772 DnaB-like helicase N terminal domain FJR47_01540 PF04551 GcpE protein FJR47_01545 PF00593 TonB dependent receptor FJR47_01545 PF07660 Secretin and TonB N terminus short domain FJR47_01545 PF07715 TonB-dependent Receptor Plug Domain FJR47_01550 PF04371 Porphyromonas-type peptidyl-arginine deiminase FJR47_01555 PF01168 Alanine racemase, N-terminal domain FJR47_01555 PF00842 Alanine racemase, C-terminal domain FJR47_01570 PF02527 rRNA small subunit methyltransferase G FJR47_01575 PF00925 GTP cyclohydrolase II FJR47_01580 PF00490 Delta-aminolevulinic acid dehydratase FJR47_01585 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain FJR47_01585 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain FJR47_01590 PF00579 tRNA synthetases class I (W and Y) FJR47_01600 PF03653 Uncharacterised protein family (UPF0093) FJR47_01605 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal FJR47_01605 PF01926 50S ribosome-binding GTPase FJR47_01625 PF05099 Tellurite resistance protein TerB FJR47_01625 PF00226 DnaJ domain FJR47_01645 PF00793 DAHP synthetase I family FJR47_01650 PF00885 6,7-dimethyl-8-ribityllumazine synthase FJR47_01655 PF01029 NusB family FJR47_01660 PF04055 Radical SAM superfamily FJR47_01665 PF05193 Peptidase M16 inactive domain FJR47_01670 PF00271 Helicase conserved C-terminal domain FJR47_01670 PF04851 Type III restriction enzyme, res subunit FJR47_01675 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein FJR47_01675 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus FJR47_01695 PF00746 LPXTG cell wall anchor motif FJR47_01700 PF13525 Outer membrane lipoprotein FJR47_01705 PF05362 Lon protease (S16) C-terminal proteolytic domain FJR47_01705 PF02190 ATP-dependent protease La (LON) substrate-binding domain FJR47_01705 PF00004 ATPase family associated with various cellular activities (AAA) FJR47_01710 PF00072 Response regulator receiver domain FJR47_01710 PF08769 Sporulation initiation factor Spo0A C terminal FJR47_01715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FJR47_01715 PF00672 HAMP domain FJR47_01715 PF00512 His Kinase A (phospho-acceptor) domain FJR47_01715 PF01627 Hpt domain FJR47_01715 PF00072 Response regulator receiver domain FJR47_01715 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) FJR47_01725 PF01541 GIY-YIG catalytic domain FJR47_01725 PF02151 UvrB/uvrC motif FJR47_01725 PF08459 UvrC Helix-hairpin-helix N-terminal FJR47_01740 PF00890 FAD binding domain FJR47_01745 PF00958 GMP synthase C terminal domain FJR47_01745 PF02540 NAD synthase FJR47_01745 PF00117 Glutamine amidotransferase class-I FJR47_01755 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain FJR47_01755 PF02843 Phosphoribosylglycinamide synthetase, C domain FJR47_01755 PF02844 Phosphoribosylglycinamide synthetase, N domain FJR47_01765 PF04453 LPS transport system D FJR47_01765 PF03968 OstA-like protein FJR47_01775 PF00013 KH domain FJR47_01775 PF01138 3' exoribonuclease family, domain 1 FJR47_01775 PF03725 3' exoribonuclease family, domain 2 FJR47_01775 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain FJR47_01775 PF00575 S1 RNA binding domain FJR47_01780 PF00137 ATP synthase subunit C FJR47_01790 PF02253 Phospholipase A1 FJR47_01800 PF00291 Pyridoxal-phosphate dependent enzyme FJR47_01815 PF03466 LysR substrate binding domain FJR47_01815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FJR47_01820 PF13361 UvrD-like helicase C-terminal domain FJR47_01820 PF00580 UvrD/REP helicase N-terminal domain FJR47_01825 PF01509 TruB family pseudouridylate synthase (N terminal domain) FJR47_01830 PF00288 GHMP kinases N terminal domain FJR47_01835 PF01668 SmpB protein FJR47_01840 PF01551 Peptidase family M23 FJR47_01850 PF01784 NIF3 (NGG1p interacting factor 3) FJR47_01860 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) FJR47_01860 PF00534 Glycosyl transferases group 1 FJR47_01865 PF00849 RNA pseudouridylate synthase FJR47_01870 PF01541 GIY-YIG catalytic domain FJR47_01875 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 FJR47_01880 PF00448 SRP54-type protein, GTPase domain FJR47_01880 PF02881 SRP54-type protein, helical bundle domain FJR47_01880 PF02978 Signal peptide binding domain FJR47_01885 PF00886 Ribosomal protein S16 FJR47_01895 PF01782 RimM N-terminal domain FJR47_01900 PF01746 tRNA (Guanine-1)-methyltransferase FJR47_01905 PF01245 Ribosomal protein L19 FJR47_01930 PF03588 Leucyl/phenylalanyl-tRNA protein transferase FJR47_01935 PF10431 C-terminal, D2-small domain, of ClpB protein FJR47_01935 PF02861 Clp amino terminal domain, pathogenicity island component FJR47_01935 PF17871 AAA lid domain FJR47_01935 PF07724 AAA domain (Cdc48 subfamily) FJR47_01935 PF00004 ATPase family associated with various cellular activities (AAA) FJR47_01940 PF02617 ATP-dependent Clp protease adaptor protein ClpS FJR47_01950 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain FJR47_01950 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain FJR47_01955 PF00425 chorismate binding enzyme FJR47_01960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FJR47_01960 PF08448 PAS fold FJR47_01960 PF08447 PAS fold FJR47_01965 PF00923 Transaldolase/Fructose-6-phosphate aldolase FJR47_01970 PF00437 Type II/IV secretion system protein FJR47_01975 PF01386 Ribosomal L25p family FJR47_01975 PF14693 Ribosomal protein TL5, C-terminal domain FJR47_01980 PF01195 Peptidyl-tRNA hydrolase FJR47_01990 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain FJR47_01990 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain FJR47_01995 PF13344 Haloacid dehalogenase-like hydrolase FJR47_02000 PF01842 ACT domain FJR47_02000 PF01817 Chorismate mutase type II FJR47_02000 PF00800 Prephenate dehydratase FJR47_02005 PF00155 Aminotransferase class I and II FJR47_02010 PF08345 Flagellar M-ring protein C-terminal FJR47_02010 PF01514 Secretory protein of YscJ/FliF family FJR47_02015 PF14842 FliG N-terminal domain FJR47_02015 PF14841 FliG middle domain FJR47_02015 PF01706 FliG C-terminal domain FJR47_02025 PF13292 1-deoxy-D-xylulose-5-phosphate synthase FJR47_02025 PF02780 Transketolase, C-terminal domain FJR47_02025 PF02779 Transketolase, pyrimidine binding domain FJR47_02030 PF02578 Multi-copper polyphenol oxidoreductase laccase FJR47_02035 PF12867 DinB superfamily FJR47_02035 PF03781 Sulfatase-modifying factor enzyme 1 FJR47_02040 PF00155 Aminotransferase class I and II FJR47_02045 PF01243 Pyridoxamine 5'-phosphate oxidase FJR47_02055 PF00005 ABC transporter FJR47_02055 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FJR47_02060 PF02537 CrcB-like protein, Camphor Resistance (CrcB) FJR47_02065 PF01553 Acyltransferase FJR47_02080 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase FJR47_02085 PF01259 SAICAR synthetase FJR47_02090 PF13180 PDZ domain FJR47_02090 PF03572 Peptidase family S41 FJR47_02105 PF01202 Shikimate kinase FJR47_02115 PF00815 Histidinol dehydrogenase FJR47_02120 PF13247 4Fe-4S dicluster domain FJR47_02130 PF01568 Molydopterin dinucleotide binding domain FJR47_02130 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FJR47_02130 PF00384 Molybdopterin oxidoreductase FJR47_02135 PF00578 AhpC/TSA family FJR47_02140 PF01384 Phosphate transporter family FJR47_02145 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD FJR47_02150 PF00216 Bacterial DNA-binding protein FJR47_02160 PF01116 Fructose-bisphosphate aldolase class-II FJR47_02165 PF13649 Methyltransferase domain FJR47_02170 PF10576 Iron-sulfur binding domain of endonuclease III FJR47_02170 PF00633 Helix-hairpin-helix motif FJR47_02170 PF00730 HhH-GPD superfamily base excision DNA repair protein FJR47_02180 PF02861 Clp amino terminal domain, pathogenicity island component FJR47_02180 PF10431 C-terminal, D2-small domain, of ClpB protein FJR47_02180 PF00004 ATPase family associated with various cellular activities (AAA) FJR47_02180 PF17871 AAA lid domain FJR47_02180 PF07724 AAA domain (Cdc48 subfamily) FJR47_02185 PF00468 Ribosomal protein L34 FJR47_02190 PF00825 Ribonuclease P FJR47_02195 PF01809 Putative membrane protein insertion efficiency factor FJR47_02200 PF14849 YidC periplasmic domain FJR47_02200 PF02096 60Kd inner membrane protein FJR47_02210 PF01926 50S ribosome-binding GTPase FJR47_02210 PF12631 MnmE helical domain FJR47_02210 PF10396 GTP-binding protein TrmE N-terminus FJR47_02215 PF03652 Holliday junction resolvase FJR47_02220 PF02386 Cation transport protein FJR47_02225 PF02080 TrkA-C domain FJR47_02225 PF02254 TrkA-N domain FJR47_02230 PF00072 Response regulator receiver domain FJR47_02230 PF00486 Transcriptional regulatory protein, C terminal FJR47_02235 PF13493 Domain of unknown function (DUF4118) FJR47_02235 PF13492 GAF domain FJR47_02235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FJR47_02235 PF00512 His Kinase A (phospho-acceptor) domain FJR47_02235 PF02702 Osmosensitive K+ channel His kinase sensor domain FJR47_02250 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FJR47_02255 PF00873 AcrB/AcrD/AcrF family FJR47_02265 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain FJR47_02265 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain FJR47_02275 PF00773 RNB domain FJR47_02285 PF01272 Transcription elongation factor, GreA/GreB, C-term FJR47_02285 PF03449 Transcription elongation factor, N-terminal FJR47_02290 PF00586 AIR synthase related protein, N-terminal domain FJR47_02290 PF02769 AIR synthase related protein, C-terminal domain FJR47_02290 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain FJR47_02295 PF03475 3-alpha domain FJR47_02295 PF03473 MOSC domain FJR47_02300 PF01784 NIF3 (NGG1p interacting factor 3) FJR47_02305 PF00365 Phosphofructokinase FJR47_02310 PF01808 AICARFT/IMPCHase bienzyme FJR47_02310 PF02142 MGS-like domain FJR47_02315 PF01435 Peptidase family M48 FJR47_02320 PF00226 DnaJ domain FJR47_02320 PF01556 DnaJ C terminal domain FJR47_02330 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) FJR47_02340 PF00929 Exonuclease FJR47_02350 PF00528 Binding-protein-dependent transport system inner membrane component FJR47_02350 PF12911 N-terminal TM domain of oligopeptide transport permease C FJR47_02400 PF02796 Helix-turn-helix domain of resolvase FJR47_02400 PF00239 Resolvase, N terminal domain FJR47_02410 PF08279 HTH domain FJR47_02410 PF13280 WYL domain FJR47_02455 PF00117 Glutamine amidotransferase class-I FJR47_02470 PF02629 CoA binding domain FJR47_02470 PF00549 CoA-ligase FJR47_02505 PF13580 SIS domain FJR47_02510 PF08645 Polynucleotide kinase 3 phosphatase FJR47_02520 PF00403 Heavy-metal-associated domain FJR47_02530 PF00034 Cytochrome c FJR47_02535 PF01370 NAD dependent epimerase/dehydratase family FJR47_02540 PF01467 Cytidylyltransferase-like FJR47_02540 PF00294 pfkB family carbohydrate kinase FJR47_02565 PF00535 Glycosyl transferase family 2 FJR47_02580 PF00534 Glycosyl transferases group 1 FJR47_02590 PF01219 Prokaryotic diacylglycerol kinase FJR47_02595 PF01075 Glycosyltransferase family 9 (heptosyltransferase) FJR47_02605 PF00664 ABC transporter transmembrane region FJR47_02605 PF00005 ABC transporter FJR47_02610 PF06969 HemN C-terminal domain FJR47_02610 PF04055 Radical SAM superfamily FJR47_02615 PF02754 Cysteine-rich domain FJR47_02620 PF01790 Prolipoprotein diacylglyceryl transferase FJR47_02630 PF00271 Helicase conserved C-terminal domain FJR47_02630 PF00270 DEAD/DEAH box helicase FJR47_02635 PF00849 RNA pseudouridylate synthase FJR47_02645 PF13472 GDSL-like Lipase/Acylhydrolase family FJR47_02655 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) FJR47_02660 PF13180 PDZ domain FJR47_02670 PF00226 DnaJ domain FJR47_02670 PF01556 DnaJ C terminal domain FJR47_02670 PF00684 DnaJ central domain FJR47_02680 PF05099 Tellurite resistance protein TerB FJR47_02680 PF00226 DnaJ domain FJR47_02715 PF13361 UvrD-like helicase C-terminal domain FJR47_02715 PF00580 UvrD/REP helicase N-terminal domain FJR47_02790 PF00166 Chaperonin 10 Kd subunit FJR47_02795 PF00118 TCP-1/cpn60 chaperonin family FJR47_02800 PF00990 Diguanylate cyclase, GGDEF domain FJR47_02800 PF00072 Response regulator receiver domain FJR47_02810 PF08534 Redoxin FJR47_02820 PF02472 Biopolymer transport protein ExbD/TolR FJR47_02825 PF01618 MotA/TolQ/ExbB proton channel family FJR47_02830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FJR47_02830 PF00512 His Kinase A (phospho-acceptor) domain FJR47_02835 PF00486 Transcriptional regulatory protein, C terminal FJR47_02835 PF00072 Response regulator receiver domain FJR47_02845 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I FJR47_02845 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II FJR47_02845 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III FJR47_02845 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain FJR47_02855 PF01433 Peptidase family M1 domain FJR47_02855 PF11940 Domain of unknown function (DUF3458) Ig-like fold FJR47_02855 PF17432 Domain of unknown function (DUF3458_C) ARM repeats FJR47_02865 PF01327 Polypeptide deformylase FJR47_02870 PF00072 Response regulator receiver domain FJR47_02870 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) FJR47_02870 PF00672 HAMP domain FJR47_02870 PF01627 Hpt domain FJR47_02870 PF00512 His Kinase A (phospho-acceptor) domain FJR47_02870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FJR47_02875 PF00072 Response regulator receiver domain FJR47_02875 PF00196 Bacterial regulatory proteins, luxR family FJR47_02880 PF03824 High-affinity nickel-transport protein FJR47_02895 PF04055 Radical SAM superfamily FJR47_02900 PF01208 Uroporphyrinogen decarboxylase (URO-D) FJR47_02910 PF01118 Semialdehyde dehydrogenase, NAD binding domain FJR47_02910 PF02774 Semialdehyde dehydrogenase, dimerisation domain FJR47_02915 PF03989 DNA gyrase C-terminal domain, beta-propeller FJR47_02915 PF00521 DNA gyrase/topoisomerase IV, subunit A FJR47_02925 PF00909 Ammonium Transporter Family FJR47_02930 PF00543 Nitrogen regulatory protein P-II FJR47_02935 PF00909 Ammonium Transporter Family FJR47_02945 PF00990 Diguanylate cyclase, GGDEF domain FJR47_02945 PF08448 PAS fold FJR47_03000 PF07726 ATPase family associated with various cellular activities (AAA) FJR47_03000 PF17863 AAA lid domain FJR47_03005 PF01882 Protein of unknown function DUF58 FJR47_03020 PF13519 von Willebrand factor type A domain FJR47_03030 PF02153 Prephenate dehydrogenase FJR47_03030 PF01842 ACT domain FJR47_03035 PF01103 Surface antigen FJR47_03035 PF07244 Surface antigen variable number repeat FJR47_03040 PF02541 Ppx/GppA phosphatase family FJR47_03045 PF00037 4Fe-4S binding domain FJR47_03050 PF00672 HAMP domain FJR47_03050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FJR47_03050 PF00512 His Kinase A (phospho-acceptor) domain FJR47_03055 PF00072 Response regulator receiver domain FJR47_03055 PF00486 Transcriptional regulatory protein, C terminal FJR47_03065 PF02660 Glycerol-3-phosphate acyltransferase FJR47_03070 PF02445 Quinolinate synthetase A protein FJR47_03075 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain FJR47_03075 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain FJR47_03090 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase FJR47_03100 PF08544 GHMP kinases C terminal FJR47_03100 PF00288 GHMP kinases N terminal domain FJR47_03110 PF00009 Elongation factor Tu GTP binding domain FJR47_03110 PF11987 Translation-initiation factor 2 FJR47_03110 PF04760 Translation initiation factor IF-2, N-terminal region FJR47_03115 PF02033 Ribosome-binding factor A FJR47_03120 PF02576 RimP N-terminal domain FJR47_03120 PF17384 RimP C-terminal SH3 domain FJR47_03125 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region FJR47_03125 PF01872 RibD C-terminal domain FJR47_03130 PF01209 ubiE/COQ5 methyltransferase family FJR47_03135 PF13742 OB-fold nucleic acid binding domain FJR47_03135 PF02601 Exonuclease VII, large subunit FJR47_03150 PF01343 Peptidase family S49 FJR47_03155 PF01979 Amidohydrolase family FJR47_03160 PF01220 Dehydroquinase class II FJR47_03165 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) FJR47_03170 PF10609 NUBPL iron-transfer P-loop NTPase FJR47_03175 PF02154 Flagellar motor switch protein FliM FJR47_03175 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term FJR47_03180 PF04509 CheC-like family FJR47_03180 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term FJR47_03215 PF03167 Uracil DNA glycosylase superfamily FJR47_03225 PF01432 Peptidase family M3 FJR47_03230 PF13180 PDZ domain FJR47_03245 PF00069 Protein kinase domain FJR47_03245 PF03793 PASTA domain FJR47_03255 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain FJR47_03255 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain FJR47_03280 PF00696 Amino acid kinase family FJR47_03285 PF01192 RNA polymerase Rpb6 FJR47_03290 PF13291 ACT domain FJR47_03290 PF04607 Region found in RelA / SpoT proteins FJR47_03290 PF02824 TGS domain FJR47_03295 PF01479 S4 domain FJR47_03295 PF00579 tRNA synthetases class I (W and Y) FJR47_03305 PF01520 N-acetylmuramoyl-L-alanine amidase FJR47_03320 PF00312 Ribosomal protein S15 FJR47_03325 PF06100 MCRA family FJR47_03330 PF02348 Cytidylyltransferase FJR47_03335 PF05175 Methyltransferase small domain FJR47_03350 PF00218 Indole-3-glycerol phosphate synthase FJR47_03360 PF01740 STAS domain FJR47_03360 PF00916 Sulfate permease family FJR47_03365 PF08264 Anticodon-binding domain of tRNA FJR47_03365 PF00133 tRNA synthetases class I (I, L, M and V) FJR47_03365 PF10458 Valyl tRNA synthetase tRNA binding arm FJR47_03380 PF02915 Rubrerythrin FJR47_03390 PF12837 4Fe-4S binding domain FJR47_03390 PF12801 4Fe-4S binding domain FJR47_03395 PF12838 4Fe-4S dicluster domain FJR47_03395 PF12800 4Fe-4S binding domain FJR47_03405 PF02028 BCCT, betaine/carnitine/choline family transporter FJR47_03410 PF13361 UvrD-like helicase C-terminal domain FJR47_03410 PF00580 UvrD/REP helicase N-terminal domain FJR47_03415 PF01590 GAF domain FJR47_03415 PF00563 EAL domain FJR47_03415 PF00360 Phytochrome region FJR47_03415 PF00990 Diguanylate cyclase, GGDEF domain FJR47_03420 PF00034 Cytochrome c FJR47_03425 PF00291 Pyridoxal-phosphate dependent enzyme FJR47_03450 PF04011 LemA family FJR47_03455 PF01966 HD domain FJR47_03475 PF00488 MutS domain V FJR47_03475 PF01713 Smr domain FJR47_03485 PF01225 Mur ligase family, catalytic domain FJR47_03485 PF02875 Mur ligase family, glutamate ligase domain FJR47_03485 PF08245 Mur ligase middle domain FJR47_03495 PF00155 Aminotransferase class I and II FJR47_03500 PF00899 ThiF family FJR47_03515 PF00561 alpha/beta hydrolase fold FJR47_03520 PF01053 Cys/Met metabolism PLP-dependent enzyme FJR47_03530 PF03595 Voltage-dependent anion channel FJR47_03535 PF00478 IMP dehydrogenase / GMP reductase domain FJR47_03535 PF00571 CBS domain FJR47_03550 PF01425 Amidase FJR47_03555 PF00696 Amino acid kinase family FJR47_03585 PF13651 Adenine-specific methyltransferase EcoRI FJR47_03590 PF02963 Restriction endonuclease EcoRI FJR47_03625 PF00589 Phage integrase family FJR47_03625 PF13495 Phage integrase, N-terminal SAM-like domain FJR47_03630 PF03600 Citrate transporter FJR47_03630 PF02080 TrkA-C domain FJR47_03635 PF00133 tRNA synthetases class I (I, L, M and V) FJR47_03635 PF08264 Anticodon-binding domain of tRNA FJR47_03640 PF02464 Competence-damaged protein FJR47_03640 PF18146 Damage-inducible protein CinA KH domain FJR47_03640 PF00994 Probable molybdopterin binding domain FJR47_03675 PF01098 Cell cycle protein FJR47_03680 PF01479 S4 domain FJR47_03680 PF00849 RNA pseudouridylate synthase FJR47_03690 PF02390 Putative methyltransferase FJR47_03695 PF00005 ABC transporter FJR47_03715 PF00291 Pyridoxal-phosphate dependent enzyme FJR47_03720 PF03807 NADP oxidoreductase coenzyme F420-dependent FJR47_03720 PF14748 Pyrroline-5-carboxylate reductase dimerisation FJR47_03725 PF00171 Aldehyde dehydrogenase family FJR47_03740 PF01883 Iron-sulfur cluster assembly protein FJR47_03745 PF04397 LytTr DNA-binding domain FJR47_03745 PF00072 Response regulator receiver domain FJR47_03750 PF01795 MraW methylase family FJR47_03760 PF00873 AcrB/AcrD/AcrF family FJR47_03770 PF02384 N-6 DNA Methylase FJR47_03775 PF01420 Type I restriction modification DNA specificity domain FJR47_03785 PF00270 DEAD/DEAH box helicase FJR47_03785 PF17191 RecG wedge domain FJR47_03785 PF13749 Putative ATP-dependent DNA helicase recG C-terminal FJR47_03790 PF02661 Fic/DOC family FJR47_03790 PF12728 Helix-turn-helix domain FJR47_03795 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) FJR47_03795 PF18766 SWI2/SNF2 ATPase FJR47_03795 PF11867 Domain of unknown function (DUF3387) FJR47_03805 PF07722 Peptidase C26 FJR47_03810 PF05690 Thiazole biosynthesis protein ThiG FJR47_03810 PF02597 ThiS family FJR47_03815 PF01648 4'-phosphopantetheinyl transferase superfamily FJR47_03825 PF18073 Rubredoxin metal binding domain FJR47_03830 PF00448 SRP54-type protein, GTPase domain FJR47_03835 PF00085 Thioredoxin FJR47_03845 PF01966 HD domain FJR47_03845 PF00013 KH domain FJR47_03845 PF12072 Domain of unknown function (DUF3552) FJR47_03850 PF01545 Cation efflux family FJR47_03850 PF16916 Dimerisation domain of Zinc Transporter FJR47_03855 PF08003 Protein of unknown function (DUF1698) FJR47_03860 PF03061 Thioesterase superfamily FJR47_03860 PF01008 Initiation factor 2 subunit family FJR47_03870 PF02540 NAD synthase FJR47_03875 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family FJR47_03880 PF02606 Tetraacyldisaccharide-1-P 4'-kinase FJR47_03885 PF00696 Amino acid kinase family FJR47_03890 PF05430 S-adenosyl-L-methionine-dependent methyltransferase FJR47_03890 PF01266 FAD dependent oxidoreductase FJR47_03900 PF00348 Polyprenyl synthetase FJR47_03905 PF01488 Shikimate / quinate 5-dehydrogenase FJR47_03905 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain FJR47_03905 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain FJR47_03910 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) FJR47_03910 PF03129 Anticodon binding domain FJR47_03925 PF03900 Porphobilinogen deaminase, C-terminal domain FJR47_03925 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain FJR47_03930 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase FJR47_03940 PF14698 Argininosuccinate lyase C-terminal FJR47_03940 PF00206 Lyase FJR47_03950 PF01230 HIT domain FJR47_03955 PF01409 tRNA synthetases class II core domain (F) FJR47_03955 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain FJR47_03960 PF03147 Ferredoxin-fold anticodon binding domain FJR47_03960 PF01588 Putative tRNA binding domain FJR47_03960 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain FJR47_03960 PF03484 tRNA synthetase B5 domain FJR47_03965 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) FJR47_03970 PF02401 LytB protein FJR47_03975 PF00575 S1 RNA binding domain FJR47_03980 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FJR47_03980 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FJR47_03980 PF01842 ACT domain FJR47_03985 PF00873 AcrB/AcrD/AcrF family FJR47_03990 PF00873 AcrB/AcrD/AcrF family FJR47_03995 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FJR47_04010 PF03309 Type III pantothenate kinase FJR47_04015 PF01634 ATP phosphoribosyltransferase FJR47_04025 PF00149 Calcineurin-like phosphoesterase FJR47_04040 PF04166 Pyridoxal phosphate biosynthetic protein PdxA FJR47_04045 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ FJR47_04050 PF03190 Protein of unknown function, DUF255 FJR47_04055 PF00999 Sodium/hydrogen exchanger family FJR47_04060 PF11412 Disulphide bond corrector protein DsbC FJR47_04060 PF02683 Cytochrome C biogenesis protein transmembrane region FJR47_04065 PF08267 Cobalamin-independent synthase, N-terminal domain FJR47_04065 PF01717 Cobalamin-independent synthase, Catalytic domain FJR47_04070 PF00132 Bacterial transferase hexapeptide (six repeats) FJR47_04070 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 FJR47_04080 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family FJR47_04085 PF02684 Lipid-A-disaccharide synthetase FJR47_04095 PF01979 Amidohydrolase family FJR47_04105 PF01702 Queuine tRNA-ribosyltransferase FJR47_04110 PF07992 Pyridine nucleotide-disulphide oxidoreductase FJR47_04115 PF01132 Elongation factor P (EF-P) OB domain FJR47_04115 PF08207 Elongation factor P (EF-P) KOW-like domain FJR47_04115 PF09285 Elongation factor P, C-terminal FJR47_04120 PF07733 Bacterial DNA polymerase III alpha NTPase domain FJR47_04120 PF14579 Helix-hairpin-helix motif FJR47_04120 PF02811 PHP domain FJR47_04120 PF17657 Bacterial DNA polymerase III alpha subunit finger domain FJR47_04130 PF02594 Uncharacterised ACR, YggU family COG1872 FJR47_04135 PF02127 Aminopeptidase I zinc metalloprotease (M18) FJR47_04145 PF01578 Cytochrome C assembly protein FJR47_04145 PF05140 ResB-like family FJR47_04155 PF00762 Ferrochelatase FJR47_04160 PF13419 Haloacid dehalogenase-like hydrolase FJR47_04180 PF00196 Bacterial regulatory proteins, luxR family FJR47_04190 PF00664 ABC transporter transmembrane region FJR47_04190 PF00005 ABC transporter FJR47_04190 PF03412 Peptidase C39 family FJR47_04240 PF00271 Helicase conserved C-terminal domain FJR47_04240 PF08463 EcoEI R protein C-terminal FJR47_04240 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) FJR47_04240 PF04851 Type III restriction enzyme, res subunit FJR47_04245 PF00270 DEAD/DEAH box helicase FJR47_04245 PF00570 HRDC domain FJR47_04245 PF16124 RecQ zinc-binding FJR47_04245 PF00271 Helicase conserved C-terminal domain FJR47_04245 PF09382 RQC domain FJR47_04255 PF02384 N-6 DNA Methylase FJR47_04255 PF12161 HsdM N-terminal domain FJR47_04260 PF01420 Type I restriction modification DNA specificity domain FJR47_04290 PF14659 Phage integrase, N-terminal SAM-like domain FJR47_04290 PF00589 Phage integrase family FJR47_04295 PF03061 Thioesterase superfamily FJR47_04315 PF02092 Glycyl-tRNA synthetase beta subunit FJR47_04325 PF02698 DUF218 domain FJR47_04335 PF01416 tRNA pseudouridine synthase FJR47_04345 PF06750 Bacterial Peptidase A24 N-terminal domain FJR47_04345 PF01478 Type IV leader peptidase family FJR47_04350 PF01255 Putative undecaprenyl diphosphate synthase FJR47_04355 PF04127 DNA / pantothenate metabolism flavoprotein FJR47_04355 PF02441 Flavoprotein FJR47_04360 PF01209 ubiE/COQ5 methyltransferase family FJR47_04375 PF00011 Hsp20/alpha crystallin family FJR47_04395 PF00701 Dihydrodipicolinate synthetase family FJR47_04400 PF00675 Insulinase (Peptidase family M16) FJR47_04400 PF05193 Peptidase M16 inactive domain FJR47_04405 PF01180 Dihydroorotate dehydrogenase FJR47_04415 PF02706 Chain length determinant protein FJR47_04415 PF13614 AAA domain FJR47_04415 PF13807 G-rich domain on putative tyrosine kinase FJR47_04435 PF00106 short chain dehydrogenase FJR47_04440 PF04030 D-arabinono-1,4-lactone oxidase FJR47_04440 PF01565 FAD binding domain FJR47_04450 PF01040 UbiA prenyltransferase family FJR47_04460 PF01170 Putative RNA methylase family UPF0020 FJR47_04460 PF02926 THUMP domain FJR47_04460 PF10672 S-adenosylmethionine-dependent methyltransferase FJR47_04465 PF07992 Pyridine nucleotide-disulphide oxidoreductase FJR47_04470 PF01406 tRNA synthetases class I (C) catalytic domain FJR47_04475 PF03023 Lipid II flippase MurJ FJR47_04480 PF07499 RuvA, C-terminal domain FJR47_04480 PF01330 RuvA N terminal domain FJR47_04485 PF07478 D-ala D-ala ligase C-terminus FJR47_04485 PF01820 D-ala D-ala ligase N-terminus FJR47_04490 PF12146 Serine aminopeptidase, S33 FJR47_04495 PF02875 Mur ligase family, glutamate ligase domain FJR47_04495 PF08245 Mur ligase middle domain FJR47_04505 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component FJR47_04510 PF01230 HIT domain FJR47_04525 PF00583 Acetyltransferase (GNAT) family FJR47_04525 PF00814 Glycoprotease family FJR47_04530 PF00571 CBS domain FJR47_04530 PF01769 Divalent cation transporter FJR47_04530 PF03448 MgtE intracellular N domain FJR47_04555 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase FJR47_04555 PF00925 GTP cyclohydrolase II FJR47_04570 PF03435 Saccharopine dehydrogenase NADP binding domain FJR47_04570 PF16653 Saccharopine dehydrogenase C-terminal domain FJR47_04575 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain FJR47_04580 PF03848 Tellurite resistance protein TehB FJR47_04590 PF01493 GXGXG motif FJR47_04590 PF00310 Glutamine amidotransferases class-II FJR47_04590 PF01645 Conserved region in glutamate synthase FJR47_04590 PF04898 Glutamate synthase central domain FJR47_04595 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster FJR47_04595 PF07992 Pyridine nucleotide-disulphide oxidoreductase FJR47_04600 PF17848 Acetyl-coA carboxylase zinc finger domain FJR47_04600 PF01039 Carboxyl transferase domain FJR47_04605 PF02581 Thiamine monophosphate synthase FJR47_04610 PF02590 Predicted SPOUT methyltransferase FJR47_04625 PF01207 Dihydrouridine synthase (Dus) FJR47_04645 PF01925 Sulfite exporter TauE/SafE FJR47_04650 PF00005 ABC transporter FJR47_04650 PF17755 UvrA DNA-binding domain FJR47_04650 PF17760 UvrA interaction domain FJR47_04655 PF00586 AIR synthase related protein, N-terminal domain FJR47_04655 PF02769 AIR synthase related protein, C-terminal domain FJR47_04660 PF00581 Rhodanese-like domain FJR47_04665 PF00924 Mechanosensitive ion channel FJR47_04670 PF11066 Protein of unknown function (DUF2867) FJR47_04670 PF13460 NAD(P)H-binding FJR47_04680 PF00881 Nitroreductase family FJR47_04685 PF03372 Endonuclease/Exonuclease/phosphatase family FJR47_04690 PF13091 PLD-like domain FJR47_04690 PF13396 Phospholipase_D-nuclease N-terminal FJR47_04695 PF01368 DHH family FJR47_04695 PF02833 DHHA2 domain FJR47_04700 PF00005 ABC transporter FJR47_04710 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FJR47_04715 PF02321 Outer membrane efflux protein FJR47_04720 PF01479 S4 domain FJR47_04725 PF02885 Glycosyl transferase family, helical bundle domain FJR47_04725 PF00591 Glycosyl transferase family, a/b domain FJR47_04730 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE FJR47_04735 PF00005 ABC transporter FJR47_04735 PF12399 Branched-chain amino acid ATP-binding cassette transporter FJR47_04745 PF13380 CoA binding domain FJR47_04750 PF13291 ACT domain FJR47_04750 PF00291 Pyridoxal-phosphate dependent enzyme FJR47_04755 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FJR47_04755 PF00205 Thiamine pyrophosphate enzyme, central domain FJR47_04755 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FJR47_04760 PF10369 Small subunit of acetolactate synthase FJR47_04765 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD FJR47_04765 PF00132 Bacterial transferase hexapeptide (six repeats) FJR47_04770 PF00132 Bacterial transferase hexapeptide (six repeats) FJR47_04770 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD FJR47_04795 PF01740 STAS domain FJR47_04795 PF00916 Sulfate permease family FJR47_04800 PF00155 Aminotransferase class I and II FJR47_04805 PF00132 Bacterial transferase hexapeptide (six repeats) FJR47_04805 PF06426 Serine acetyltransferase, N-terminal FJR47_04810 PF17944 Arginine decarboxylase C-terminal helical extension FJR47_04810 PF17810 Arginine decarboxylase helical bundle domain FJR47_04810 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain FJR47_04815 PF13393 Histidyl-tRNA synthetase FJR47_04815 PF03129 Anticodon binding domain FJR47_04820 PF02777 Iron/manganese superoxide dismutases, C-terminal domain FJR47_04820 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain FJR47_04825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FJR47_04830 PF02223 Thymidylate kinase FJR47_04835 PF01467 Cytidylyltransferase-like FJR47_04840 PF02441 Flavoprotein FJR47_04850 PF17854 FtsK alpha domain FJR47_04850 PF09397 Ftsk gamma domain FJR47_04850 PF01580 FtsK/SpoIIIE family FJR47_04860 PF11791 Aconitate B N-terminal domain FJR47_04860 PF06434 Aconitate hydratase 2 N-terminus FJR47_04860 PF00330 Aconitase family (aconitate hydratase) FJR47_04865 PF03548 Outer membrane lipoprotein carrier protein LolA FJR47_04870 PF00271 Helicase conserved C-terminal domain FJR47_04870 PF02810 SEC-C motif FJR47_04870 PF01043 SecA preprotein cross-linking domain FJR47_04870 PF07516 SecA Wing and Scaffold domain FJR47_04870 PF07517 SecA DEAD-like domain FJR47_04875 PF02687 FtsX-like permease family FJR47_04875 PF12704 MacB-like periplasmic core domain FJR47_04885 PF02618 YceG-like family FJR47_04890 PF03971 Monomeric isocitrate dehydrogenase FJR47_04895 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain FJR47_04895 PF00056 lactate/malate dehydrogenase, NAD binding domain FJR47_04900 PF10415 Fumarase C C-terminus FJR47_04900 PF00206 Lyase FJR47_04905 PF00549 CoA-ligase FJR47_04905 PF08442 ATP-grasp domain FJR47_04910 PF02629 CoA binding domain FJR47_04910 PF00549 CoA-ligase FJR47_04920 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II FJR47_04920 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase FJR47_04920 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg FJR47_04925 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FJR47_04950 PF00072 Response regulator receiver domain FJR47_04950 PF08769 Sporulation initiation factor Spo0A C terminal FJR47_04960 PF00749 tRNA synthetases class I (E and Q), catalytic domain FJR47_04960 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain FJR47_04965 PF00749 tRNA synthetases class I (E and Q), catalytic domain FJR47_04985 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain FJR47_04995 PF00133 tRNA synthetases class I (I, L, M and V) FJR47_04995 PF09334 tRNA synthetases class I (M) FJR47_04995 PF01588 Putative tRNA binding domain FJR47_05005 PF03480 Bacterial extracellular solute-binding protein, family 7 FJR47_05015 PF06508 Queuosine biosynthesis protein QueC FJR47_05020 PF02130 Uncharacterized protein family UPF0054 FJR47_05025 PF01699 Sodium/calcium exchanger protein FJR47_05030 PF00905 Penicillin binding protein transpeptidase domain FJR47_05030 PF03717 Penicillin-binding Protein dimerisation domain FJR47_05045 PF01926 50S ribosome-binding GTPase FJR47_05065 PF00475 Imidazoleglycerol-phosphate dehydratase FJR47_05070 PF05036 Sporulation related domain FJR47_05070 PF03330 Lytic transglycolase FJR47_05075 PF01476 LysM domain FJR47_05075 PF01464 Transglycosylase SLT domain FJR47_05080 PF01026 TatD related DNase FJR47_05085 PF13476 AAA domain FJR47_05095 PF01513 ATP-NAD kinase FJR47_05100 PF02938 GAD domain FJR47_05100 PF00152 tRNA synthetases class II (D, K and N) FJR47_05100 PF01336 OB-fold nucleic acid binding domain FJR47_05110 PF05191 Adenylate kinase, active site lid FJR47_05130 PF14602 Hexapeptide repeat of succinyl-transferase FJR47_05130 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle FJR47_05150 PF00588 SpoU rRNA Methylase family FJR47_05155 PF01842 ACT domain FJR47_05155 PF00551 Formyl transferase FJR47_05160 PF00180 Isocitrate/isopropylmalate dehydrogenase FJR47_05165 PF00694 Aconitase C-terminal domain FJR47_05170 PF00583 Acetyltransferase (GNAT) family FJR47_05170 PF00795 Carbon-nitrogen hydrolase FJR47_05175 PF00140 Sigma-70 factor, region 1.2 FJR47_05175 PF04542 Sigma-70 region 2 FJR47_05175 PF04539 Sigma-70 region 3 FJR47_05175 PF04545 Sigma-70, region 4 FJR47_05195 PF00202 Aminotransferase class-III FJR47_05215 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain FJR47_05215 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain FJR47_05220 PF10502 Signal peptidase, peptidase S26 FJR47_05225 PF02163 Peptidase family M50 FJR47_05230 PF02502 Ribose/Galactose Isomerase FJR47_05235 PF00156 Phosphoribosyl transferase domain FJR47_05240 PF00291 Pyridoxal-phosphate dependent enzyme FJR47_05245 PF00883 Cytosol aminopeptidase family, catalytic domain FJR47_05245 PF02789 Cytosol aminopeptidase family, N-terminal domain FJR47_05265 PF00563 EAL domain FJR47_05265 PF08495 FIST N domain FJR47_05265 PF10442 FIST C domain FJR47_05265 PF00990 Diguanylate cyclase, GGDEF domain FJR47_05270 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FJR47_05270 PF07992 Pyridine nucleotide-disulphide oxidoreductase FJR47_05275 PF04055 Radical SAM superfamily FJR47_05280 PF03099 Biotin/lipoate A/B protein ligase family FJR47_05285 PF00550 Phosphopantetheine attachment site FJR47_05290 PF00364 Biotin-requiring enzyme FJR47_05290 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) FJR47_05290 PF02817 e3 binding domain FJR47_05295 PF02779 Transketolase, pyrimidine binding domain FJR47_05295 PF02780 Transketolase, C-terminal domain FJR47_05295 PF00364 Biotin-requiring enzyme FJR47_05300 PF00676 Dehydrogenase E1 component FJR47_05305 PF00501 AMP-binding enzyme FJR47_05305 PF13193 AMP-binding enzyme C-terminal domain FJR47_05315 PF00128 Alpha amylase, catalytic domain FJR47_05315 PF02806 Alpha amylase, C-terminal all-beta domain FJR47_05315 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) FJR47_05320 PF08323 Starch synthase catalytic domain FJR47_05320 PF00534 Glycosyl transferases group 1 FJR47_05325 PF00480 ROK family FJR47_05330 PF00534 Glycosyl transferases group 1 FJR47_05330 PF08323 Starch synthase catalytic domain FJR47_05340 PF09094 Domain of unknown function (DUF1925) FJR47_05340 PF09095 Domain of unknown function (DUF1926) FJR47_05340 PF03065 Glycosyl hydrolase family 57 FJR47_05350 PF00483 Nucleotidyl transferase FJR47_05355 PF00343 Carbohydrate phosphorylase FJR47_05355 PF11897 Protein of unknown function (DUF3417) FJR47_05360 PF00342 Phosphoglucose isomerase FJR47_05365 PF00224 Pyruvate kinase, barrel domain FJR47_05365 PF02887 Pyruvate kinase, alpha/beta domain FJR47_05370 PF07992 Pyridine nucleotide-disulphide oxidoreductase FJR47_05370 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FJR47_05375 PF02535 ZIP Zinc transporter FJR47_05385 PF07669 Eco57I restriction-modification methylase FJR47_05420 PF01926 50S ribosome-binding GTPase FJR47_05420 PF06071 Protein of unknown function (DUF933) FJR47_05430 PF00005 ABC transporter FJR47_05435 PF13533 Biotin-lipoyl like FJR47_05440 PF02666 Phosphatidylserine decarboxylase FJR47_05445 PF01142 tRNA pseudouridine synthase D (TruD) FJR47_05465 PF02910 Fumarate reductase flavoprotein C-term FJR47_05465 PF00890 FAD binding domain FJR47_05470 PF13085 2Fe-2S iron-sulfur cluster binding domain FJR47_05475 PF02754 Cysteine-rich domain FJR47_05485 PF13194 Domain of unknown function (DUF4010) FJR47_05505 PF00994 Probable molybdopterin binding domain FJR47_05515 PF17862 AAA+ lid domain FJR47_05515 PF06480 FtsH Extracellular FJR47_05515 PF01434 Peptidase family M41 FJR47_05515 PF00004 ATPase family associated with various cellular activities (AAA) FJR47_05520 PF04055 Radical SAM superfamily FJR47_05520 PF00919 Uncharacterized protein family UPF0004 FJR47_05530 PF01761 3-dehydroquinate synthase FJR47_05540 PF05958 tRNA (Uracil-5-)-methyltransferase FJR47_05545 PF00132 Bacterial transferase hexapeptide (six repeats) FJR47_05545 PF12804 MobA-like NTP transferase domain FJR47_05560 PF01545 Cation efflux family FJR47_05560 PF16916 Dimerisation domain of Zinc Transporter FJR47_05570 PF13476 AAA domain FJR47_05580 PF01661 Macro domain FJR47_05590 PF00313 'Cold-shock' DNA-binding domain FJR47_05615 PF01145 SPFH domain / Band 7 family FJR47_05620 PF00574 Clp protease FJR47_05625 PF04055 Radical SAM superfamily FJR47_05635 PF01262 Alanine dehydrogenase/PNT, C-terminal domain FJR47_05635 PF05222 Alanine dehydrogenase/PNT, N-terminal domain FJR47_05645 PF03009 Glycerophosphoryl diester phosphodiesterase family FJR47_05650 PF11700 Vacuole effluxer Atg22 like FJR47_05655 PF00550 Phosphopantetheine attachment site FJR47_05660 PF01066 CDP-alcohol phosphatidyltransferase FJR47_05665 PF17820 PDZ domain FJR47_05665 PF02163 Peptidase family M50 FJR47_05670 PF01168 Alanine racemase, N-terminal domain FJR47_05675 PF00194 Eukaryotic-type carbonic anhydrase FJR47_05690 PF02581 Thiamine monophosphate synthase FJR47_05695 PF03477 ATP cone domain FJR47_05695 PF02867 Ribonucleotide reductase, barrel domain FJR47_05695 PF00317 Ribonucleotide reductase, all-alpha domain FJR47_05710 PF01077 Nitrite and sulphite reductase 4Fe-4S domain FJR47_05710 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain FJR47_05715 PF00072 Response regulator receiver domain FJR47_05715 PF00486 Transcriptional regulatory protein, C terminal FJR47_05720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FJR47_05720 PF08447 PAS fold FJR47_05720 PF08448 PAS fold FJR47_05725 PF01612 3'-5' exonuclease FJR47_05725 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain FJR47_05725 PF01367 5'-3' exonuclease, C-terminal SAM fold FJR47_05725 PF00476 DNA polymerase family A FJR47_05745 PF00589 Phage integrase family FJR47_05745 PF02899 Phage integrase, N-terminal SAM-like domain FJR47_05760 PF02686 Glu-tRNAGln amidotransferase C subunit FJR47_05765 PF00437 Type II/IV secretion system protein FJR47_05780 PF00202 Aminotransferase class-III FJR47_05785 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FJR47_05785 PF00384 Molybdopterin oxidoreductase FJR47_05785 PF01568 Molydopterin dinucleotide binding domain FJR47_05795 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit FJR47_05800 PF00364 Biotin-requiring enzyme FJR47_05800 PF00682 HMGL-like FJR47_05800 PF02436 Conserved carboxylase domain FJR47_05805 PF04277 Oxaloacetate decarboxylase, gamma chain FJR47_05810 PF12823 Domain of unknown function (DUF3817) FJR47_05825 PF00183 Hsp90 protein FJR47_05830 PF00582 Universal stress protein family FJR47_05840 PF10996 Beta-Casp domain FJR47_05840 PF00753 Metallo-beta-lactamase superfamily FJR47_05840 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain FJR47_05845 PF12848 ABC transporter FJR47_05845 PF16326 ABC transporter C-terminal domain FJR47_05845 PF00005 ABC transporter FJR47_05850 PF01474 Class-II DAHP synthetase family FJR47_05860 PF01475 Ferric uptake regulator family FJR47_05865 PF00152 tRNA synthetases class II (D, K and N) FJR47_05865 PF01336 OB-fold nucleic acid binding domain FJR47_05870 PF00464 Serine hydroxymethyltransferase FJR47_05880 PF04715 Anthranilate synthase component I, N terminal region FJR47_05880 PF00425 chorismate binding enzyme FJR47_05885 PF08501 Shikimate dehydrogenase substrate binding domain FJR47_05895 PF00510 Cytochrome c oxidase subunit III FJR47_05900 PF08406 CbbQ/NirQ/NorQ C-terminal FJR47_05900 PF07728 AAA domain (dynein-related subfamily) FJR47_05910 PF00115 Cytochrome C and Quinol oxidase polypeptide I FJR47_05915 PF00034 Cytochrome c FJR47_05920 PF02082 Transcriptional regulator FJR47_05935 PF00116 Cytochrome C oxidase subunit II, periplasmic domain FJR47_05935 PF18764 Nitrous oxide reductase propeller repeat FJR47_05935 PF18793 Nitrous oxide reductase propeller repeat 2 FJR47_05945 PF00374 Nickel-dependent hydrogenase FJR47_05950 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal FJR47_05950 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit FJR47_05950 PF10518 TAT (twin-arginine translocation) pathway signal sequence FJR47_05955 PF00535 Glycosyl transferase family 2 FJR47_05960 PF12146 Serine aminopeptidase, S33 FJR47_05965 PF00990 Diguanylate cyclase, GGDEF domain FJR47_05965 PF00563 EAL domain FJR47_05965 PF08495 FIST N domain FJR47_05965 PF10442 FIST C domain FJR47_05980 PF04333 MlaA lipoprotein FJR47_05985 PF02132 RecR protein FJR47_05985 PF13662 Toprim domain FJR47_05990 PF06725 3D domain FJR47_05990 PF03562 MltA specific insert domain FJR47_05995 PF00226 DnaJ domain FJR47_05995 PF01556 DnaJ C terminal domain FJR47_05995 PF00684 DnaJ central domain FJR47_06005 PF00202 Aminotransferase class-III FJR47_06020 PF02491 SHS2 domain inserted in FTSA FJR47_06025 PF12327 FtsZ family, C-terminal domain FJR47_06025 PF00091 Tubulin/FtsZ family, GTPase domain FJR47_06045 PF18764 Nitrous oxide reductase propeller repeat FJR47_06045 PF18793 Nitrous oxide reductase propeller repeat 2 FJR47_06045 PF00116 Cytochrome C oxidase subunit II, periplasmic domain FJR47_06060 PF12800 4Fe-4S binding domain FJR47_06060 PF12838 4Fe-4S dicluster domain FJR47_06075 PF12801 4Fe-4S binding domain FJR47_06075 PF13237 4Fe-4S dicluster domain FJR47_06080 PF00005 ABC transporter FJR47_06100 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FJR47_06100 PF08447 PAS fold FJR47_06105 PF00027 Cyclic nucleotide-binding domain FJR47_06105 PF13545 Crp-like helix-turn-helix domain FJR47_06120 PF00005 ABC transporter FJR47_06135 PF05573 NosL FJR47_06145 PF17827 PrmC N-terminal domain FJR47_06145 PF05175 Methyltransferase small domain FJR47_06150 PF16491 CAAX prenyl protease N-terminal, five membrane helices FJR47_06150 PF01435 Peptidase family M48 FJR47_06160 PF01734 Patatin-like phospholipase FJR47_06165 PF00005 ABC transporter FJR47_06200 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus FJR47_06200 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus FJR47_06210 PF07885 Ion channel FJR47_06210 PF02254 TrkA-N domain FJR47_06215 PF02637 GatB domain FJR47_06215 PF02934 GatB/GatE catalytic domain FJR47_06230 PF00990 Diguanylate cyclase, GGDEF domain FJR47_06240 PF00119 ATP synthase A chain FJR47_06250 PF06574 FAD synthetase FJR47_06250 PF01687 Riboflavin kinase FJR47_06265 PF05853 beta-keto acid cleavage enzyme FJR47_06295 PF01728 FtsJ-like methyltransferase FJR47_06295 PF01479 S4 domain FJR47_06300 PF01653 NAD-dependent DNA ligase adenylation domain FJR47_06300 PF00533 BRCA1 C Terminus (BRCT) domain FJR47_06300 PF12826 Helix-hairpin-helix motif FJR47_06300 PF03120 NAD-dependent DNA ligase OB-fold domain FJR47_06315 PF00528 Binding-protein-dependent transport system inner membrane component FJR47_06320 PF00005 ABC transporter FJR47_06340 PF00486 Transcriptional regulatory protein, C terminal FJR47_06340 PF00072 Response regulator receiver domain FJR47_06345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FJR47_06355 PF01554 MatE FJR47_06365 PF05661 Protein of unknown function (DUF808) FJR47_06375 PF00764 Arginosuccinate synthase FJR47_06380 PF00581 Rhodanese-like domain FJR47_06380 PF12368 Rhodanase C-terminal FJR47_06380 PF17773 UPF0176 acylphosphatase like domain FJR47_06385 PF01281 Ribosomal protein L9, N-terminal domain FJR47_06385 PF03948 Ribosomal protein L9, C-terminal domain FJR47_06390 PF00227 Proteasome subunit FJR47_06395 PF10431 C-terminal, D2-small domain, of ClpB protein FJR47_06395 PF07724 AAA domain (Cdc48 subfamily) FJR47_06400 PF01926 50S ribosome-binding GTPase FJR47_06400 PF07650 KH domain FJR47_06420 PF00263 Bacterial type II and III secretion system protein FJR47_06420 PF03958 Bacterial type II/III secretion system short domain FJR47_06440 PF00437 Type II/IV secretion system protein FJR47_06440 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain FJR47_06445 PF00482 Type II secretion system (T2SS), protein F FJR47_06450 PF01709 Transcriptional regulator FJR47_06460 PF01171 PP-loop family FJR47_06465 PF01048 Phosphorylase superfamily FJR47_06470 PF00698 Acyl transferase domain FJR47_06475 PF02954 Bacterial regulatory protein, Fis family FJR47_06475 PF00072 Response regulator receiver domain FJR47_06475 PF00158 Sigma-54 interaction domain FJR47_06480 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FJR47_06495 PF04052 TolB amino-terminal domain FJR47_06505 PF02472 Biopolymer transport protein ExbD/TolR FJR47_06510 PF01618 MotA/TolQ/ExbB proton channel family FJR47_06515 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain FJR47_06520 PF02874 ATP synthase alpha/beta family, beta-barrel domain FJR47_06520 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FJR47_06525 PF00231 ATP synthase FJR47_06530 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FJR47_06530 PF00306 ATP synthase alpha/beta chain, C terminal domain FJR47_06530 PF02874 ATP synthase alpha/beta family, beta-barrel domain FJR47_06535 PF00213 ATP synthase delta (OSCP) subunit FJR47_06540 PF00430 ATP synthase B/B' CF(0) FJR47_06545 PF00430 ATP synthase B/B' CF(0) FJR47_06550 PF02195 ParB-like nuclease domain FJR47_06550 PF17762 HTH domain found in ParB protein FJR47_06555 PF13614 AAA domain FJR47_06565 PF00551 Formyl transferase FJR47_06565 PF02911 Formyl transferase, C-terminal domain FJR47_06570 PF00696 Amino acid kinase family FJR47_06575 PF01926 50S ribosome-binding GTPase FJR47_06575 PF01018 GTP1/OBG FJR47_06580 PF01016 Ribosomal L27 protein FJR47_06585 PF00829 Ribosomal prokaryotic L21 protein FJR47_06590 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA FJR47_06600 PF00586 AIR synthase related protein, N-terminal domain FJR47_06600 PF02769 AIR synthase related protein, C-terminal domain FJR47_06610 PF01924 Hydrogenase formation hypA family FJR47_06615 PF01455 HupF/HypC family FJR47_06620 PF02492 CobW/HypB/UreG, nucleotide-binding domain FJR47_06640 PF00708 Acylphosphatase FJR47_06640 PF17788 HypF Kae1-like domain FJR47_06640 PF01300 Telomere recombination FJR47_06640 PF07503 HypF finger FJR47_06650 PF01750 Hydrogenase maturation protease FJR47_06655 PF01292 Prokaryotic cytochrome b561 FJR47_06660 PF00374 Nickel-dependent hydrogenase FJR47_06665 PF10518 TAT (twin-arginine translocation) pathway signal sequence FJR47_06665 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal FJR47_06665 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit FJR47_06680 PF00440 Bacterial regulatory proteins, tetR family FJR47_06685 PF01042 Endoribonuclease L-PSP FJR47_06690 PF01546 Peptidase family M20/M25/M40 FJR47_06690 PF07687 Peptidase dimerisation domain FJR47_06695 PF01624 MutS domain I FJR47_06695 PF05188 MutS domain II FJR47_06695 PF05192 MutS domain III FJR47_06695 PF05190 MutS family domain IV FJR47_06695 PF00488 MutS domain V FJR47_06735 PF00263 Bacterial type II and III secretion system protein FJR47_06735 PF03958 Bacterial type II/III secretion system short domain FJR47_06745 PF14659 Phage integrase, N-terminal SAM-like domain FJR47_06745 PF00589 Phage integrase family FJR47_06755 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family FJR47_06760 PF16177 Acetyl-coenzyme A synthetase N-terminus FJR47_06760 PF00501 AMP-binding enzyme FJR47_06760 PF13193 AMP-binding enzyme C-terminal domain FJR47_06765 PF14579 Helix-hairpin-helix motif FJR47_06765 PF11490 DNA polymerase III polC-type N-terminus II FJR47_06765 PF07733 Bacterial DNA polymerase III alpha NTPase domain FJR47_06765 PF17657 Bacterial DNA polymerase III alpha subunit finger domain FJR47_06765 PF00929 Exonuclease FJR47_06765 PF02811 PHP domain FJR47_06775 PF00474 Sodium:solute symporter family FJR47_06780 PF04341 Protein of unknown function, DUF485 FJR47_06795 PF00072 Response regulator receiver domain FJR47_06795 PF00486 Transcriptional regulatory protein, C terminal FJR47_06800 PF00672 HAMP domain FJR47_06800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FJR47_06800 PF00512 His Kinase A (phospho-acceptor) domain FJR47_06805 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD FJR47_06810 PF02677 Epoxyqueuosine reductase QueH FJR47_06815 PF07977 FabA-like domain FJR47_06820 PF00132 Bacterial transferase hexapeptide (six repeats) FJR47_06820 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 FJR47_06825 PF06689 ClpX C4-type zinc finger FJR47_06825 PF10431 C-terminal, D2-small domain, of ClpB protein FJR47_06825 PF07724 AAA domain (Cdc48 subfamily) FJR47_06840 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FJR47_06840 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain FJR47_06840 PF02142 MGS-like domain FJR47_06855 PF03738 Glutathionylspermidine synthase preATP-grasp FJR47_06860 PF00342 Phosphoglucose isomerase FJR47_06865 PF00483 Nucleotidyl transferase FJR47_06870 PF02516 Oligosaccharyl transferase STT3 subunit FJR47_06870 PF18527 STT3/PglB C-terminal beta-barrel domain FJR47_06875 PF00535 Glycosyl transferase family 2 FJR47_06880 PF04055 Radical SAM superfamily FJR47_06885 PF02772 S-adenosylmethionine synthetase, central domain FJR47_06885 PF00438 S-adenosylmethionine synthetase, N-terminal domain FJR47_06885 PF02773 S-adenosylmethionine synthetase, C-terminal domain FJR47_06890 PF01842 ACT domain FJR47_06890 PF08335 GlnD PII-uridylyltransferase FJR47_06890 PF01966 HD domain FJR47_06890 PF01909 Nucleotidyltransferase domain FJR47_06895 PF01380 SIS domain FJR47_06900 PF10609 NUBPL iron-transfer P-loop NTPase FJR47_06900 PF01883 Iron-sulfur cluster assembly protein FJR47_06905 PF01964 Radical SAM ThiC family FJR47_06910 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase FJR47_06910 PF02542 YgbB family FJR47_06915 PF00072 Response regulator receiver domain FJR47_06915 PF00486 Transcriptional regulatory protein, C terminal FJR47_06920 PF01747 ATP-sulfurylase FJR47_06920 PF14306 PUA-like domain FJR47_06955 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain FJR47_06955 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase FJR47_06975 PF00873 AcrB/AcrD/AcrF family FJR47_06995 PF00313 'Cold-shock' DNA-binding domain FJR47_07000 PF12848 ABC transporter FJR47_07000 PF00005 ABC transporter FJR47_07015 PF00171 Aldehyde dehydrogenase family FJR47_07015 PF14850 DNA-binding domain of Proline dehydrogenase FJR47_07015 PF18327 Proline utilization A proline dehydrogenase N-terminal domain FJR47_07015 PF01619 Proline dehydrogenase FJR47_07020 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain FJR47_07020 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase FJR47_07035 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FJR47_07035 PF00384 Molybdopterin oxidoreductase FJR47_07035 PF01568 Molydopterin dinucleotide binding domain FJR47_07035 PF10518 TAT (twin-arginine translocation) pathway signal sequence FJR47_07040 PF12838 4Fe-4S dicluster domain FJR47_07040 PF12800 4Fe-4S binding domain FJR47_07045 PF12837 4Fe-4S binding domain FJR47_07045 PF12801 4Fe-4S binding domain FJR47_07050 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) FJR47_07065 PF08447 PAS fold FJR47_07065 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FJR47_07085 PF00557 Metallopeptidase family M24 FJR47_07085 PF05195 Aminopeptidase P, N-terminal domain FJR47_07100 PF00005 ABC transporter FJR47_07105 PF02405 Permease MlaE FJR47_07115 PF02774 Semialdehyde dehydrogenase, dimerisation domain FJR47_07115 PF01118 Semialdehyde dehydrogenase, NAD binding domain FJR47_07120 PF01272 Transcription elongation factor, GreA/GreB, C-term FJR47_07120 PF03449 Transcription elongation factor, N-terminal FJR47_07130 PF00899 ThiF family FJR47_07135 PF01975 Survival protein SurE FJR47_07145 PF00005 ABC transporter FJR47_07150 PF00950 ABC 3 transport family FJR47_07155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FJR47_07155 PF03459 TOBE domain FJR47_07165 PF01497 Periplasmic binding protein FJR47_07175 PF01032 FecCD transport family FJR47_07180 PF00005 ABC transporter FJR47_07190 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FJR47_07190 PF07498 Rho termination factor, N-terminal domain FJR47_07190 PF07497 Rho termination factor, RNA-binding domain FJR47_07195 PF01177 Asp/Glu/Hydantoin racemase FJR47_07215 PF12169 DNA polymerase III subunits gamma and tau domain III FJR47_07215 PF12170 DNA polymerase III tau subunit V interacting with alpha FJR47_07220 PF13493 Domain of unknown function (DUF4118) FJR47_07220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FJR47_07220 PF00512 His Kinase A (phospho-acceptor) domain FJR47_07220 PF02702 Osmosensitive K+ channel His kinase sensor domain FJR47_07225 PF00486 Transcriptional regulatory protein, C terminal FJR47_07225 PF00072 Response regulator receiver domain FJR47_07230 PF13277 YmdB-like protein FJR47_07235 PF17757 UvrB interaction domain FJR47_07235 PF03461 TRCF domain FJR47_07235 PF00271 Helicase conserved C-terminal domain FJR47_07235 PF00270 DEAD/DEAH box helicase FJR47_07235 PF02559 CarD-like/TRCF domain FJR47_07240 PF01551 Peptidase family M23 FJR47_07240 PF04225 Opacity-associated protein A LysM-like domain FJR47_07245 PF08245 Mur ligase middle domain FJR47_07255 PF09334 tRNA synthetases class I (M) FJR47_07255 PF13603 Leucyl-tRNA synthetase, Domain 2 FJR47_07255 PF00133 tRNA synthetases class I (I, L, M and V) FJR47_07265 PF02355 Protein export membrane protein FJR47_07265 PF07549 SecD/SecF GG Motif FJR47_07270 PF02355 Protein export membrane protein FJR47_07275 PF02699 Preprotein translocase subunit FJR47_07285 PF13089 Polyphosphate kinase N-terminal domain FJR47_07285 PF17941 Polyphosphate kinase C-terminal domain 1 FJR47_07285 PF13090 Polyphosphate kinase C-terminal domain 2 FJR47_07285 PF02503 Polyphosphate kinase middle domain FJR47_07290 PF00132 Bacterial transferase hexapeptide (six repeats) FJR47_07295 PF03458 UPF0126 domain FJR47_07300 PF01960 ArgJ family FJR47_07310 PF00830 Ribosomal L28 family FJR47_07315 PF00834 Ribulose-phosphate 3 epimerase family FJR47_07320 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase FJR47_07325 PF00929 Exonuclease FJR47_07325 PF07733 Bacterial DNA polymerase III alpha NTPase domain FJR47_07325 PF11490 DNA polymerase III polC-type N-terminus II FJR47_07325 PF14480 DNA polymerase III polC-type N-terminus I FJR47_07325 PF02811 PHP domain FJR47_07325 PF17657 Bacterial DNA polymerase III alpha subunit finger domain FJR47_07325 PF14579 Helix-hairpin-helix motif FJR47_07330 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit FJR47_07335 PF02801 Beta-ketoacyl synthase, C-terminal domain FJR47_07335 PF00109 Beta-ketoacyl synthase, N-terminal domain FJR47_07340 PF00550 Phosphopantetheine attachment site FJR47_07360 PF01243 Pyridoxamine 5'-phosphate oxidase FJR47_07360 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region FJR47_07365 PF03109 ABC1 family FJR47_07375 PF03441 FAD binding domain of DNA photolyase FJR47_07375 PF00875 DNA photolyase FJR47_07390 PF01676 Metalloenzyme superfamily FJR47_07390 PF06415 BPG-independent PGAM N-terminus (iPGM_N) FJR47_07395 PF00953 Glycosyl transferase family 4 FJR47_07395 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 FJR47_07400 PF08245 Mur ligase middle domain FJR47_07405 PF00551 Formyl transferase FJR47_07450 PF02384 N-6 DNA Methylase FJR47_07550 PF00589 Phage integrase family FJR47_07550 PF13356 Arm DNA-binding domain FJR47_07585 PF00939 Sodium:sulfate symporter transmembrane region FJR47_07590 PF14572 Phosphoribosyl synthetase-associated domain FJR47_07590 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase FJR47_07595 PF00679 Elongation factor G C-terminus FJR47_07595 PF00009 Elongation factor Tu GTP binding domain FJR47_07595 PF06421 GTP-binding protein LepA C-terminus FJR47_07615 PF00990 Diguanylate cyclase, GGDEF domain FJR47_07625 PF01025 GrpE FJR47_07630 PF00012 Hsp70 protein FJR47_07635 PF00809 Pterin binding enzyme FJR47_07650 PF00696 Amino acid kinase family FJR47_07650 PF01842 ACT domain FJR47_07650 PF13840 ACT domain FJR47_07655 PF00293 NUDIX domain FJR47_07660 PF06969 HemN C-terminal domain FJR47_07660 PF04055 Radical SAM superfamily FJR47_07665 PF02416 mttA/Hcf106 family FJR47_07670 PF00902 Sec-independent protein translocase protein (TatC) FJR47_07675 PF02547 Queuosine biosynthesis protein FJR47_07685 PF04748 Divergent polysaccharide deacetylase FJR47_07690 PF01250 Ribosomal protein S6 FJR47_07695 PF00436 Single-strand binding protein family FJR47_07700 PF01084 Ribosomal protein S18 FJR47_07720 PF02403 Seryl-tRNA synthetase N-terminal domain FJR47_07720 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) FJR47_07725 PF02666 Phosphatidylserine decarboxylase FJR47_07730 PF01434 Peptidase family M41 FJR47_07730 PF17862 AAA+ lid domain FJR47_07730 PF00004 ATPase family associated with various cellular activities (AAA) FJR47_07740 PF00977 Histidine biosynthesis protein FJR47_07745 PF00117 Glutamine amidotransferase class-I FJR47_07760 PF01594 AI-2E family transporter FJR47_07765 PF17864 RuvB AAA lid domain FJR47_07765 PF05491 RuvB C-terminal winged helix domain FJR47_07765 PF05496 Holliday junction DNA helicase RuvB P-loop domain FJR47_07770 PF02548 Ketopantoate hydroxymethyltransferase FJR47_07775 PF00290 Tryptophan synthase alpha chain FJR47_07800 PF00696 Amino acid kinase family FJR47_07815 PF08443 RimK-like ATP-grasp domain FJR47_07815 PF18030 RimK PreATP-grasp domain FJR47_07835 PF01654 Cytochrome bd terminal oxidase subunit I FJR47_07840 PF02322 Cytochrome bd terminal oxidase subunit II FJR47_07850 PF00271 Helicase conserved C-terminal domain FJR47_07850 PF04851 Type III restriction enzyme, res subunit FJR47_07850 PF02151 UvrB/uvrC motif FJR47_07850 PF12344 Ultra-violet resistance protein B FJR47_07850 PF17757 UvrB interaction domain FJR47_07860 PF01293 Phosphoenolpyruvate carboxykinase FJR47_07880 PF04055 Radical SAM superfamily FJR47_07880 PF18693 TRAM domain FJR47_07880 PF00919 Uncharacterized protein family UPF0004 FJR47_07885 PF01171 PP-loop family FJR47_07890 PF00593 TonB dependent receptor FJR47_07890 PF07715 TonB-dependent Receptor Plug Domain FJR47_07895 PF01618 MotA/TolQ/ExbB proton channel family FJR47_07900 PF02472 Biopolymer transport protein ExbD/TolR FJR47_07920 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component FJR47_07925 PF01869 BadF/BadG/BcrA/BcrD ATPase family FJR47_07930 PF00873 AcrB/AcrD/AcrF family FJR47_07955 PF00589 Phage integrase family FJR47_07955 PF02899 Phage integrase, N-terminal SAM-like domain FJR47_07960 PF04028 Domain of unknown function (DUF374) FJR47_07965 PF00919 Uncharacterized protein family UPF0004 FJR47_07965 PF01938 TRAM domain FJR47_07965 PF04055 Radical SAM superfamily FJR47_07975 PF08529 NusA N-terminal domain FJR47_07975 PF13184 NusA-like KH domain FJR47_07980 PF00528 Binding-protein-dependent transport system inner membrane component FJR47_07995 PF00121 Triosephosphate isomerase FJR47_08000 PF00162 Phosphoglycerate kinase FJR47_08005 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain FJR47_08005 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain FJR47_08010 PF01467 Cytidylyltransferase-like FJR47_08020 PF00732 GMC oxidoreductase FJR47_08020 PF05199 GMC oxidoreductase FJR47_08040 PF00486 Transcriptional regulatory protein, C terminal FJR47_08040 PF00072 Response regulator receiver domain FJR47_08045 PF07670 Nucleoside recognition FJR47_08045 PF02421 Ferrous iron transport protein B FJR47_08045 PF07664 Ferrous iron transport protein B C terminus FJR47_08050 PF04023 FeoA domain FJR47_08060 PF01066 CDP-alcohol phosphatidyltransferase FJR47_08075 PF00270 DEAD/DEAH box helicase FJR47_08075 PF00271 Helicase conserved C-terminal domain FJR47_08090 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal FJR47_08090 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III FJR47_08095 PF02504 Fatty acid synthesis protein FJR47_08100 PF01783 Ribosomal L32p protein family FJR47_08110 PF00334 Nucleoside diphosphate kinase FJR47_08115 PF00037 4Fe-4S binding domain FJR47_08120 PF00438 S-adenosylmethionine synthetase, N-terminal domain FJR47_08120 PF02772 S-adenosylmethionine synthetase, central domain FJR47_08120 PF02773 S-adenosylmethionine synthetase, C-terminal domain FJR47_08125 PF00578 AhpC/TSA family FJR47_08125 PF10417 C-terminal domain of 1-Cys peroxiredoxin FJR47_08130 PF01966 HD domain FJR47_08135 PF05970 PIF1-like helicase FJR47_08135 PF02689 Helicase FJR47_08140 PF00690 Cation transporter/ATPase, N-terminus FJR47_08140 PF00689 Cation transporting ATPase, C-terminus FJR47_08145 PF13203 Putative metallopeptidase domain FJR47_08145 PF09967 VWA-like domain (DUF2201) FJR47_08150 PF00210 Ferritin-like domain FJR47_08165 PF06965 Na+/H+ antiporter 1 FJR47_08175 PF13378 Enolase C-terminal domain-like FJR47_08175 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FJR47_08190 PF17657 Bacterial DNA polymerase III alpha subunit finger domain FJR47_08190 PF02811 PHP domain FJR47_08190 PF14579 Helix-hairpin-helix motif FJR47_08190 PF07733 Bacterial DNA polymerase III alpha NTPase domain FJR47_08190 PF11490 DNA polymerase III polC-type N-terminus II FJR47_08190 PF14480 DNA polymerase III polC-type N-terminus I FJR47_08190 PF00929 Exonuclease FJR47_08195 PF03553 Na+/H+ antiporter family FJR47_08210 PF00750 tRNA synthetases class I (R) FJR47_08210 PF05746 DALR anticodon binding domain FJR47_08210 PF03485 Arginyl tRNA synthetase N terminal domain FJR47_08215 PF02416 mttA/Hcf106 family FJR47_08220 PF00625 Guanylate kinase FJR47_08230 PF00005 ABC transporter FJR47_08240 PF00889 Elongation factor TS FJR47_08245 PF00318 Ribosomal protein S2 FJR47_08260 PF05853 beta-keto acid cleavage enzyme FJR47_08270 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component FJR47_08280 PF00578 AhpC/TSA family FJR47_08295 PF09335 SNARE associated Golgi protein FJR47_08300 PF04101 Glycosyltransferase family 28 C-terminal domain FJR47_08300 PF03033 Glycosyltransferase family 28 N-terminal domain FJR47_08305 PF01098 Cell cycle protein FJR47_08310 PF01040 UbiA prenyltransferase family FJR47_08320 PF00072 Response regulator receiver domain FJR47_08320 PF00486 Transcriptional regulatory protein, C terminal FJR47_08335 PF00563 EAL domain FJR47_08335 PF01590 GAF domain FJR47_08335 PF00990 Diguanylate cyclase, GGDEF domain FJR47_08335 PF00360 Phytochrome region FJR47_08345 PF00361 Proton-conducting membrane transporter FJR47_08350 PF00361 Proton-conducting membrane transporter FJR47_08350 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus FJR47_08355 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus FJR47_08355 PF00361 Proton-conducting membrane transporter FJR47_08360 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L FJR47_08365 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 FJR47_08370 PF12838 4Fe-4S dicluster domain FJR47_08375 PF00146 NADH dehydrogenase FJR47_08380 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region FJR47_08380 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal FJR47_08380 PF00384 Molybdopterin oxidoreductase FJR47_08385 PF12838 4Fe-4S dicluster domain FJR47_08385 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FJR47_08385 PF01568 Molydopterin dinucleotide binding domain FJR47_08385 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region FJR47_08385 PF00384 Molybdopterin oxidoreductase FJR47_08390 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region FJR47_08390 PF07992 Pyridine nucleotide-disulphide oxidoreductase FJR47_08390 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster FJR47_08400 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit FJR47_08405 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit FJR47_08410 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit FJR47_08415 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 FJR47_08440 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain FJR47_08440 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain FJR47_08440 PF02805 Metal binding domain of Ada FJR47_08440 PF12833 Helix-turn-helix domain FJR47_08445 PF00464 Serine hydroxymethyltransferase FJR47_08450 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region FJR47_08460 PF00004 ATPase family associated with various cellular activities (AAA) FJR47_08460 PF16450 Proteasomal ATPase OB C-terminal domain FJR47_08460 PF17758 Proteasomal ATPase OB N-terminal domain FJR47_08465 PF01261 Xylose isomerase-like TIM barrel FJR47_08485 PF11798 IMS family HHH motif FJR47_08485 PF00817 impB/mucB/samB family FJR47_08505 PF01595 Cyclin M transmembrane N-terminal domain FJR47_08505 PF00571 CBS domain FJR47_08515 PF00528 Binding-protein-dependent transport system inner membrane component FJR47_08520 PF00005 ABC transporter FJR47_08520 PF12857 TOBE-like domain FJR47_08530 PF01875 Memo-like protein FJR47_08535 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase FJR47_08535 PF01871 AMMECR1 FJR47_08545 PF01370 NAD dependent epimerase/dehydratase family FJR47_08545 PF08338 Domain of unknown function (DUF1731) FJR47_08550 PF13538 UvrD-like helicase C-terminal domain FJR47_08550 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain FJR47_08550 PF14490 Helix-hairpin-helix containing domain FJR47_08565 PF17726 Dam-replacing HTH domain FJR47_08565 PF06044 Dam-replacing family FJR47_08570 PF02091 Glycyl-tRNA synthetase alpha subunit FJR47_08590 PF00731 AIR carboxylase FJR47_08595 PF01136 Peptidase family U32 FJR47_08600 PF02811 PHP domain FJR47_08605 PF00085 Thioredoxin FJR47_08610 PF07992 Pyridine nucleotide-disulphide oxidoreductase FJR47_08615 PF05173 Dihydrodipicolinate reductase, C-terminus FJR47_08615 PF01113 Dihydrodipicolinate reductase, N-terminus FJR47_08620 PF13537 Glutamine amidotransferase domain FJR47_08620 PF00156 Phosphoribosyl transferase domain FJR47_08625 PF16199 Radical_SAM C-terminal domain FJR47_08625 PF04055 Radical SAM superfamily FJR47_08630 PF01502 Phosphoribosyl-AMP cyclohydrolase FJR47_08630 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase FJR47_08635 PF01145 SPFH domain / Band 7 family FJR47_08640 PF01063 Amino-transferase class IV FJR47_08650 PF12849 PBP superfamily domain FJR47_08655 PF03976 Polyphosphate kinase 2 (PPK2) FJR47_08660 PF00528 Binding-protein-dependent transport system inner membrane component FJR47_08665 PF00528 Binding-protein-dependent transport system inner membrane component FJR47_08670 PF00005 ABC transporter FJR47_08675 PF01895 PhoU domain FJR47_08680 PF00120 Glutamine synthetase, catalytic domain FJR47_08680 PF03951 Glutamine synthetase, beta-Grasp domain FJR47_08685 PF08502 LeuA allosteric (dimerisation) domain FJR47_08685 PF00682 HMGL-like FJR47_08690 PF01699 Sodium/calcium exchanger protein FJR47_08695 PF00912 Transglycosylase FJR47_08695 PF00905 Penicillin binding protein transpeptidase domain FJR47_08700 PF00005 ABC transporter FJR47_08700 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FJR47_08705 PF00155 Aminotransferase class I and II FJR47_08710 PF02545 Maf-like protein FJR47_08720 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain FJR47_08720 PF01411 tRNA synthetases class II (A) FJR47_08720 PF02272 DHHA1 domain FJR47_08730 PF00171 Aldehyde dehydrogenase family FJR47_08740 PF02021 Uncharacterised protein family UPF0102 FJR47_08745 PF01568 Molydopterin dinucleotide binding domain FJR47_08745 PF00384 Molybdopterin oxidoreductase FJR47_08745 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FJR47_08750 PF01842 ACT domain FJR47_08750 PF00742 Homoserine dehydrogenase FJR47_08750 PF03447 Homoserine dehydrogenase, NAD binding domain FJR47_08755 PF00155 Aminotransferase class I and II FJR47_08770 PF08032 RNA 2'-O ribose methyltransferase substrate binding FJR47_08770 PF00588 SpoU rRNA Methylase family FJR47_08775 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FJR47_08780 PF01197 Ribosomal protein L31 FJR47_08795 PF03453 MoeA N-terminal region (domain I and II) FJR47_08795 PF03454 MoeA C-terminal region (domain IV) FJR47_08795 PF00994 Probable molybdopterin binding domain FJR47_08810 PF04055 Radical SAM superfamily FJR47_08810 PF06463 Molybdenum Cofactor Synthesis C FJR47_08835 PF00033 Cytochrome b/b6/petB FJR47_08835 PF00032 Cytochrome b(C-terminal)/b6/petD FJR47_08840 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal FJR47_08840 PF00355 Rieske [2Fe-2S] domain FJR47_08850 PF01134 Glucose inhibited division protein A FJR47_08850 PF13932 GidA associated domain FJR47_08860 PF00677 Lumazine binding domain FJR47_08865 PF16124 RecQ zinc-binding FJR47_08865 PF09382 RQC domain FJR47_08865 PF00270 DEAD/DEAH box helicase FJR47_08865 PF00271 Helicase conserved C-terminal domain FJR47_08865 PF00570 HRDC domain FJR47_08885 PF02664 S-Ribosylhomocysteinase (LuxS) FJR47_08890 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FJR47_08895 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II FJR47_08895 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg FJR47_08905 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase FJR47_08910 PF13419 Haloacid dehalogenase-like hydrolase FJR47_08915 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FJR47_08920 PF00380 Ribosomal protein S9/S16 FJR47_08925 PF00572 Ribosomal protein L13 FJR47_08930 PF00580 UvrD/REP helicase N-terminal domain FJR47_08930 PF13361 UvrD-like helicase C-terminal domain FJR47_08930 PF12705 PD-(D/E)XK nuclease superfamily FJR47_08955 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP FJR47_08955 PF13442 Cytochrome C oxidase, cbb3-type, subunit III FJR47_08970 PF00115 Cytochrome C and Quinol oxidase polypeptide I FJR47_08975 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain FJR47_08975 PF00117 Glutamine amidotransferase class-I FJR47_08985 PF00709 Adenylosuccinate synthetase FJR47_08990 PF13393 Histidyl-tRNA synthetase FJR47_08995 PF00266 Aminotransferase class-V FJR47_09000 PF02673 Bacitracin resistance protein BacA FJR47_09005 PF01725 Ham1 family FJR47_09010 PF07690 Major Facilitator Superfamily FJR47_09015 PF00707 Translation initiation factor IF-3, C-terminal domain FJR47_09015 PF05198 Translation initiation factor IF-3, N-terminal domain FJR47_09020 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain FJR47_09020 PF03129 Anticodon binding domain FJR47_09020 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) FJR47_09025 PF00920 Dehydratase family FJR47_09075 PF00474 Sodium:solute symporter family FJR47_09080 PF08212 Lipocalin-like domain FJR47_09100 PF10417 C-terminal domain of 1-Cys peroxiredoxin FJR47_09100 PF00578 AhpC/TSA family FJR47_09105 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FJR47_09120 PF17805 AsnC-like ligand binding domain FJR47_09125 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FJR47_09125 PF10414 Sirohaem synthase dimerisation region FJR47_09125 PF14824 Sirohaem biosynthesis protein central FJR47_09135 PF02885 Glycosyl transferase family, helical bundle domain FJR47_09135 PF00591 Glycosyl transferase family, a/b domain FJR47_09155 PF13186 Iron-sulfur cluster-binding domain FJR47_09155 PF04055 Radical SAM superfamily FJR47_09165 PF10414 Sirohaem synthase dimerisation region FJR47_09165 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FJR47_09165 PF14824 Sirohaem biosynthesis protein central FJR47_09170 PF08447 PAS fold FJR47_09170 PF08448 PAS fold FJR47_09170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FJR47_09175 PF00072 Response regulator receiver domain FJR47_09175 PF00486 Transcriptional regulatory protein, C terminal FJR47_09185 PF00375 Sodium:dicarboxylate symporter family FJR47_09190 PF00571 CBS domain FJR47_09190 PF01769 Divalent cation transporter FJR47_09190 PF03448 MgtE intracellular N domain FJR47_09225 PF00113 Enolase, C-terminal TIM barrel domain FJR47_09225 PF03952 Enolase, N-terminal domain FJR47_09230 PF00154 recA bacterial DNA recombination protein FJR47_09235 PF02621 Menaquinone biosynthesis FJR47_09240 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain FJR47_09245 PF04324 BFD-like [2Fe-2S] binding domain FJR47_09245 PF01106 NifU-like domain FJR47_09245 PF01592 NifU-like N terminal domain FJR47_09250 PF00266 Aminotransferase class-V FJR47_09260 PF00330 Aconitase family (aconitate hydratase) FJR47_09265 PF00691 OmpA family FJR47_09265 PF05736 OprF membrane domain FJR47_09270 PF12804 MobA-like NTP transferase domain FJR47_09275 PF01967 MoaC family FJR47_09290 PF01264 Chorismate synthase FJR47_09295 PF00035 Double-stranded RNA binding motif FJR47_09295 PF14622 Ribonuclease-III-like FJR47_09300 PF00075 RNase H FJR47_09310 PF03601 Conserved hypothetical protein 698 FJR47_09325 PF02310 B12 binding domain FJR47_09325 PF02607 B12 binding domain FJR47_09325 PF02965 Vitamin B12 dependent methionine synthase, activation domain FJR47_09325 PF00809 Pterin binding enzyme FJR47_09325 PF02574 Homocysteine S-methyltransferase FJR47_09330 PF04264 YceI-like domain FJR47_09335 PF01078 Magnesium chelatase, subunit ChlI FJR47_09335 PF13335 Magnesium chelatase, subunit ChlI C-terminal FJR47_09340 PF01327 Polypeptide deformylase FJR47_09350 PF00574 Clp protease FJR47_09355 PF05697 Bacterial trigger factor protein (TF) FJR47_09355 PF05698 Bacterial trigger factor protein (TF) C-terminus FJR47_09355 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FJR47_09360 PF01252 Signal peptidase (SPase) II FJR47_09365 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I FJR47_09365 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II FJR47_09365 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III FJR47_09365 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain FJR47_09370 PF01649 Ribosomal protein S20 FJR47_09375 PF03462 PCRF domain FJR47_09375 PF00472 RF-1 domain FJR47_09380 PF01678 Diaminopimelate epimerase FJR47_09385 PF01121 Dephospho-CoA kinase FJR47_09390 PF17284 Spermidine synthase tetramerisation domain FJR47_09400 PF02769 AIR synthase related protein, C-terminal domain FJR47_09400 PF00586 AIR synthase related protein, N-terminal domain FJR47_09425 PF01027 Inhibitor of apoptosis-promoting Bax1 FJR47_09430 PF17792 ThiD2 family FJR47_09430 PF02581 Thiamine monophosphate synthase FJR47_09470 PF03840 Preprotein translocase SecG subunit FJR47_09475 PF01765 Ribosome recycling factor FJR47_09480 PF00156 Phosphoribosyl transferase domain FJR47_09485 PF00933 Glycosyl hydrolase family 3 N terminal domain FJR47_09495 PF03702 Anhydro-N-acetylmuramic acid kinase FJR47_09500 PF01636 Phosphotransferase enzyme family FJR47_09505 PF00483 Nucleotidyl transferase FJR47_09515 PF01263 Aldose 1-epimerase FJR47_09520 PF07690 Major Facilitator Superfamily FJR47_09525 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD FJR47_09530 PF00999 Sodium/hydrogen exchanger family FJR47_09530 PF02254 TrkA-N domain FJR47_09535 PF06418 CTP synthase N-terminus FJR47_09535 PF00117 Glutamine amidotransferase class-I FJR47_09540 PF01368 DHH family FJR47_09540 PF02272 DHHA1 domain FJR47_09540 PF17768 RecJ OB domain FJR47_09540 PF10141 Single-strand DNA-specific exonuclease, C terminal domain FJR47_09570 PF10518 TAT (twin-arginine translocation) pathway signal sequence FJR47_09570 PF01568 Molydopterin dinucleotide binding domain FJR47_09570 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FJR47_09570 PF00384 Molybdopterin oxidoreductase FJR47_09575 PF13247 4Fe-4S dicluster domain FJR47_09590 PF16123 Hydroxyacylglutathione hydrolase C-terminus FJR47_09590 PF00753 Metallo-beta-lactamase superfamily FJR47_09595 PF01227 GTP cyclohydrolase I FJR47_09600 PF13426 PAS domain FJR47_09600 PF01740 STAS domain FJR47_09605 PF00563 EAL domain FJR47_09605 PF13185 GAF domain FJR47_09605 PF00990 Diguanylate cyclase, GGDEF domain FJR47_09610 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain FJR47_09610 PF17770 Ribonuclease J C-terminal domain FJR47_09610 PF00753 Metallo-beta-lactamase superfamily FJR47_09615 PF00398 Ribosomal RNA adenine dimethylase FJR47_09620 PF00977 Histidine biosynthesis protein FJR47_09630 PF04055 Radical SAM superfamily FJR47_09640 PF00849 RNA pseudouridylate synthase FJR47_09645 PF10397 Adenylosuccinate lyase C-terminus FJR47_09645 PF00206 Lyase FJR47_09650 PF03477 ATP cone domain FJR47_09650 PF02867 Ribonucleotide reductase, barrel domain FJR47_09650 PF00317 Ribonucleotide reductase, all-alpha domain FJR47_09660 PF13180 PDZ domain FJR47_09660 PF17820 PDZ domain FJR47_09665 PF00085 Thioredoxin FJR47_09670 PF06865 Pyrimidine/purine nucleoside phosphorylase