locus-tag class description SUTH_00001 PF11638 DnaA N-terminal domain SUTH_00001 PF08299 Bacterial dnaA protein helix-turn-helix SUTH_00001 PF00308 Bacterial dnaA protein SUTH_00002 PF00712 DNA polymerase III beta subunit, N-terminal domain SUTH_00002 PF02768 DNA polymerase III beta subunit, C-terminal domain SUTH_00002 PF02767 DNA polymerase III beta subunit, central domain SUTH_00003 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SUTH_00003 PF01751 Toprim domain SUTH_00003 PF18053 DNA gyrase B subunit insert domain SUTH_00003 PF00986 DNA gyrase B subunit, carboxyl terminus SUTH_00003 PF00204 DNA gyrase B SUTH_00004 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain SUTH_00004 PF01464 Transglycosylase SLT domain SUTH_00006 PF03880 DbpA RNA binding domain SUTH_00006 PF00270 DEAD/DEAH box helicase SUTH_00006 PF00271 Helicase conserved C-terminal domain SUTH_00008 PF00472 RF-1 domain SUTH_00020 PF00145 C-5 cytosine-specific DNA methylase SUTH_00021 PF04480 Protein of unknown function (DUF559) SUTH_00021 PF03852 DNA mismatch endonuclease Vsr SUTH_00026 PF00909 Ammonium Transporter Family SUTH_00027 PF06725 3D domain SUTH_00027 PF03562 MltA specific insert domain SUTH_00029 PF00293 NUDIX domain SUTH_00030 PF07072 Cell division protein SUTH_00031 PF01121 Dephospho-CoA kinase SUTH_00033 PF00291 Pyridoxal-phosphate dependent enzyme SUTH_00034 PF02675 S-adenosylmethionine decarboxylase SUTH_00039 PF01850 PIN domain SUTH_00048 PF03309 Type III pantothenate kinase SUTH_00049 PF02237 Biotin protein ligase C terminal domain SUTH_00049 PF03099 Biotin/lipoate A/B protein ligase family SUTH_00049 PF08279 HTH domain SUTH_00050 PF02954 Bacterial regulatory protein, Fis family SUTH_00050 PF00072 Response regulator receiver domain SUTH_00050 PF00158 Sigma-54 interaction domain SUTH_00051 PF00989 PAS fold SUTH_00051 PF00512 His Kinase A (phospho-acceptor) domain SUTH_00051 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SUTH_00054 PF01545 Cation efflux family SUTH_00054 PF16916 Dimerisation domain of Zinc Transporter SUTH_00056 PF02445 Quinolinate synthetase A protein SUTH_00057 PF00563 EAL domain SUTH_00057 PF08668 HDOD domain SUTH_00058 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding SUTH_00058 PF18381 YcaO cyclodehydratase C-terminal domain SUTH_00059 PF03372 Endonuclease/Exonuclease/phosphatase family SUTH_00060 PF13091 PLD-like domain SUTH_00062 PF00005 ABC transporter SUTH_00063 PF00528 Binding-protein-dependent transport system inner membrane component SUTH_00064 PF00528 Binding-protein-dependent transport system inner membrane component SUTH_00065 PF00497 Bacterial extracellular solute-binding proteins, family 3 SUTH_00066 PF00005 ABC transporter SUTH_00066 PF00664 ABC transporter transmembrane region SUTH_00068 PF13173 AAA domain SUTH_00068 PF13635 Domain of unknown function (DUF4143) SUTH_00069 PF01594 AI-2E family transporter SUTH_00070 PF00440 Bacterial regulatory proteins, tetR family SUTH_00071 PF02803 Thiolase, C-terminal domain SUTH_00071 PF00108 Thiolase, N-terminal domain SUTH_00073 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain SUTH_00073 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain SUTH_00073 PF00378 Enoyl-CoA hydratase/isomerase SUTH_00076 PF12833 Helix-turn-helix domain SUTH_00076 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain SUTH_00076 PF02805 Metal binding domain of Ada SUTH_00076 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain SUTH_00078 PF03061 Thioesterase superfamily SUTH_00080 PF00438 S-adenosylmethionine synthetase, N-terminal domain SUTH_00080 PF02773 S-adenosylmethionine synthetase, C-terminal domain SUTH_00080 PF02772 S-adenosylmethionine synthetase, central domain SUTH_00081 PF08240 Alcohol dehydrogenase GroES-like domain SUTH_00081 PF00107 Zinc-binding dehydrogenase SUTH_00082 PF00877 NlpC/P60 family SUTH_00085 PF17932 Tetracyclin repressor-like, C-terminal domain SUTH_00085 PF00440 Bacterial regulatory proteins, tetR family SUTH_00086 PF00378 Enoyl-CoA hydratase/isomerase SUTH_00088 PF02770 Acyl-CoA dehydrogenase, middle domain SUTH_00088 PF00441 Acyl-CoA dehydrogenase, C-terminal domain SUTH_00088 PF18158 Adaptive response protein AidB N-terminal domain SUTH_00089 PF00441 Acyl-CoA dehydrogenase, C-terminal domain SUTH_00089 PF02771 Acyl-CoA dehydrogenase, N-terminal domain SUTH_00089 PF02770 Acyl-CoA dehydrogenase, middle domain SUTH_00090 PF00108 Thiolase, N-terminal domain SUTH_00090 PF02803 Thiolase, C-terminal domain SUTH_00091 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain SUTH_00091 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain SUTH_00091 PF00378 Enoyl-CoA hydratase/isomerase SUTH_00092 PF02653 Branched-chain amino acid transport system / permease component SUTH_00093 PF02653 Branched-chain amino acid transport system / permease component SUTH_00094 PF12399 Branched-chain amino acid ATP-binding cassette transporter SUTH_00094 PF00005 ABC transporter SUTH_00095 PF00005 ABC transporter SUTH_00096 PF00501 AMP-binding enzyme SUTH_00104 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SUTH_00104 PF03466 LysR substrate binding domain SUTH_00105 PF02915 Rubrerythrin SUTH_00106 PF02754 Cysteine-rich domain SUTH_00106 PF13183 4Fe-4S dicluster domain SUTH_00111 PF00271 Helicase conserved C-terminal domain SUTH_00111 PF00270 DEAD/DEAH box helicase SUTH_00112 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SUTH_00112 PF00672 HAMP domain SUTH_00112 PF12729 Four helix bundle sensory module for signal transduction SUTH_00114 PF01131 DNA topoisomerase SUTH_00114 PF01751 Toprim domain SUTH_00115 PF04361 Protein of unknown function (DUF494) SUTH_00116 PF17782 DprA winged helix domain SUTH_00116 PF02481 DNA recombination-mediator protein A SUTH_00118 PF01327 Polypeptide deformylase SUTH_00119 PF00551 Formyl transferase SUTH_00119 PF02911 Formyl transferase, C-terminal domain SUTH_00120 PF03572 Peptidase family S41 SUTH_00120 PF13180 PDZ domain SUTH_00122 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin SUTH_00125 PF01029 NusB family SUTH_00125 PF01189 16S rRNA methyltransferase RsmB/F SUTH_00127 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SUTH_00127 PF00672 HAMP domain SUTH_00128 PF02954 Bacterial regulatory protein, Fis family SUTH_00128 PF00072 Response regulator receiver domain SUTH_00128 PF00158 Sigma-54 interaction domain SUTH_00129 PF02254 TrkA-N domain SUTH_00129 PF02080 TrkA-C domain SUTH_00130 PF02386 Cation transport protein SUTH_00131 PF01208 Uroporphyrinogen decarboxylase (URO-D) SUTH_00132 PF18319 PriA DNA helicase Cys-rich region (CRR) domain SUTH_00132 PF00270 DEAD/DEAH box helicase SUTH_00132 PF00271 Helicase conserved C-terminal domain SUTH_00132 PF18074 Primosomal protein N C-terminal domain SUTH_00132 PF17764 3′ DNA-binding domain (3′BD) SUTH_00133 PF01609 Transposase DDE domain SUTH_00133 PF05598 Transposase domain (DUF772) SUTH_00135 PF03473 MOSC domain SUTH_00135 PF03475 3-alpha domain SUTH_00136 PF00480 ROK family SUTH_00139 PF00689 Cation transporting ATPase, C-terminus SUTH_00139 PF00690 Cation transporter/ATPase, N-terminus SUTH_00143 PF04545 Sigma-70, region 4 SUTH_00143 PF04539 Sigma-70 region 3 SUTH_00143 PF04542 Sigma-70 region 2 SUTH_00146 PF11871 Domain of unknown function (DUF3391) SUTH_00146 PF01966 HD domain SUTH_00147 PF00589 Phage integrase family SUTH_00147 PF02899 Phage integrase, N-terminal SAM-like domain SUTH_00149 PF01678 Diaminopimelate epimerase SUTH_00150 PF03279 Bacterial lipid A biosynthesis acyltransferase SUTH_00153 PF02894 Oxidoreductase family, C-terminal alpha/beta domain SUTH_00153 PF01408 Oxidoreductase family, NAD-binding Rossmann fold SUTH_00154 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family SUTH_00155 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 SUTH_00155 PF00132 Bacterial transferase hexapeptide (six repeats) SUTH_00161 PF02772 S-adenosylmethionine synthetase, central domain SUTH_00161 PF02773 S-adenosylmethionine synthetase, C-terminal domain SUTH_00161 PF00438 S-adenosylmethionine synthetase, N-terminal domain SUTH_00163 PF00255 Glutathione peroxidase SUTH_00167 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family SUTH_00168 PF13193 AMP-binding enzyme C-terminal domain SUTH_00168 PF00501 AMP-binding enzyme SUTH_00169 PF01613 Flavin reductase like domain SUTH_00172 PF05726 Pirin C-terminal cupin domain SUTH_00172 PF02678 Pirin SUTH_00173 PF00672 HAMP domain SUTH_00173 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SUTH_00174 PF00166 Chaperonin 10 Kd subunit SUTH_00175 PF00118 TCP-1/cpn60 chaperonin family SUTH_00177 PF00072 Response regulator receiver domain SUTH_00177 PF00486 Transcriptional regulatory protein, C terminal SUTH_00178 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SUTH_00178 PF00512 His Kinase A (phospho-acceptor) domain SUTH_00178 PF08521 Two-component sensor kinase N-terminal SUTH_00180 PF00474 Sodium:solute symporter family SUTH_00183 PF00069 Protein kinase domain SUTH_00184 PF00474 Sodium:solute symporter family SUTH_00185 PF04341 Protein of unknown function, DUF485 SUTH_00187 PF00899 ThiF family SUTH_00189 PF01171 PP-loop family SUTH_00191 PF01467 Cytidylyltransferase-like SUTH_00193 PF02590 Predicted SPOUT methyltransferase SUTH_00194 PF02545 Maf-like protein SUTH_00195 PF00575 S1 RNA binding domain SUTH_00195 PF10150 Ribonuclease E/G family SUTH_00198 PF12804 MobA-like NTP transferase domain SUTH_00201 PF01597 Glycine cleavage H-protein SUTH_00202 PF00080 Copper/zinc superoxide dismutase (SODC) SUTH_00203 PF09106 Elongation factor SelB, winged helix SUTH_00203 PF09107 Elongation factor SelB, winged helix SUTH_00203 PF03144 Elongation factor Tu domain 2 SUTH_00203 PF00009 Elongation factor Tu GTP binding domain SUTH_00204 PF01841 Transglutaminase-like superfamily SUTH_00205 PF00578 AhpC/TSA family SUTH_00206 PF12390 Selenocysteine synthase N terminal SUTH_00206 PF03841 L-seryl-tRNA selenium transferase SUTH_00210 PF04216 Protein involved in formate dehydrogenase formation SUTH_00211 PF01292 Prokaryotic cytochrome b561 SUTH_00212 PF13247 4Fe-4S dicluster domain SUTH_00212 PF09163 Formate dehydrogenase N, transmembrane SUTH_00212 PF12800 4Fe-4S binding domain SUTH_00213 PF01568 Molydopterin dinucleotide binding domain SUTH_00213 PF04879 Molybdopterin oxidoreductase Fe4S4 domain SUTH_00213 PF00384 Molybdopterin oxidoreductase SUTH_00214 PF00384 Molybdopterin oxidoreductase SUTH_00214 PF04879 Molybdopterin oxidoreductase Fe4S4 domain SUTH_00214 PF01568 Molydopterin dinucleotide binding domain SUTH_00215 PF02954 Bacterial regulatory protein, Fis family SUTH_00215 PF00072 Response regulator receiver domain SUTH_00215 PF00158 Sigma-54 interaction domain SUTH_00216 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SUTH_00216 PF00512 His Kinase A (phospho-acceptor) domain SUTH_00217 PF13098 Thioredoxin-like domain SUTH_00217 PF10411 Disulfide bond isomerase protein N-terminus SUTH_00218 PF01494 FAD binding domain SUTH_00227 PF03372 Endonuclease/Exonuclease/phosphatase family SUTH_00228 PF00156 Phosphoribosyl transferase domain SUTH_00230 PF02934 GatB/GatE catalytic domain SUTH_00230 PF02637 GatB domain SUTH_00231 PF01425 Amidase SUTH_00232 PF02686 Glu-tRNAGln amidotransferase C subunit SUTH_00236 PF03717 Penicillin-binding Protein dimerisation domain SUTH_00236 PF00905 Penicillin binding protein transpeptidase domain SUTH_00237 PF01098 Cell cycle protein SUTH_00238 PF03330 Lytic transglycolase SUTH_00238 PF05036 Sporulation related domain SUTH_00239 PF00768 D-alanyl-D-alanine carboxypeptidase SUTH_00239 PF07943 Penicillin-binding protein 5, C-terminal domain SUTH_00240 PF01063 Amino-transferase class IV SUTH_00241 PF04359 Protein of unknown function (DUF493) SUTH_00242 PF03099 Biotin/lipoate A/B protein ligase family SUTH_00243 PF04055 Radical SAM superfamily SUTH_00244 PF07690 Major Facilitator Superfamily SUTH_00250 PF13193 AMP-binding enzyme C-terminal domain SUTH_00250 PF00501 AMP-binding enzyme SUTH_00253 PF00580 UvrD/REP helicase N-terminal domain SUTH_00253 PF13361 UvrD-like helicase C-terminal domain SUTH_00254 PF13442 Cytochrome C oxidase, cbb3-type, subunit III SUTH_00256 PF03441 FAD binding domain of DNA photolyase SUTH_00256 PF00875 DNA photolyase SUTH_00257 PF02622 Uncharacterized ACR, COG1678 SUTH_00258 PF03652 Holliday junction resolvase SUTH_00259 PF00156 Phosphoribosyl transferase domain SUTH_00260 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain SUTH_00260 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain SUTH_00261 PF01979 Amidohydrolase family SUTH_00262 PF00271 Helicase conserved C-terminal domain SUTH_00262 PF00270 DEAD/DEAH box helicase SUTH_00262 PF03880 DbpA RNA binding domain SUTH_00263 PF02594 Uncharacterised ACR, YggU family COG1872 SUTH_00264 PF02325 YGGT family SUTH_00265 PF14748 Pyrroline-5-carboxylate reductase dimerisation SUTH_00265 PF03807 NADP oxidoreductase coenzyme F420-dependent SUTH_00266 PF01168 Alanine racemase, N-terminal domain SUTH_00267 PF00437 Type II/IV secretion system protein SUTH_00268 PF00437 Type II/IV secretion system protein SUTH_00269 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SUTH_00269 PF17202 Single cache domain 3 SUTH_00269 PF00672 HAMP domain SUTH_00271 PF02926 THUMP domain SUTH_00271 PF01170 Putative RNA methylase family UPF0020 SUTH_00274 PF00175 Oxidoreductase NAD-binding domain SUTH_00274 PF00111 2Fe-2S iron-sulfur cluster binding domain SUTH_00274 PF00970 Oxidoreductase FAD-binding domain SUTH_00275 PF00005 ABC transporter SUTH_00276 PF00005 ABC transporter SUTH_00276 PF12399 Branched-chain amino acid ATP-binding cassette transporter SUTH_00277 PF02653 Branched-chain amino acid transport system / permease component SUTH_00277 PF11862 Domain of unknown function (DUF3382) SUTH_00278 PF02653 Branched-chain amino acid transport system / permease component SUTH_00279 PF13458 Periplasmic binding protein SUTH_00280 PF13442 Cytochrome C oxidase, cbb3-type, subunit III SUTH_00281 PF03190 Protein of unknown function, DUF255 SUTH_00282 PF04344 Chemotaxis phosphatase, CheZ SUTH_00283 PF00072 Response regulator receiver domain SUTH_00287 PF04143 Sulphur transport SUTH_00289 PF01292 Prokaryotic cytochrome b561 SUTH_00291 PF00920 Dehydratase family SUTH_00293 PF01790 Prolipoprotein diacylglyceryl transferase SUTH_00294 PF00106 short chain dehydrogenase SUTH_00295 PF01323 DSBA-like thioredoxin domain SUTH_00297 PF00750 tRNA synthetases class I (R) SUTH_00297 PF05746 DALR anticodon binding domain SUTH_00297 PF03485 Arginyl tRNA synthetase N terminal domain SUTH_00298 PF03109 ABC1 family SUTH_00304 PF02129 X-Pro dipeptidyl-peptidase (S15 family) SUTH_00305 PF00005 ABC transporter SUTH_00307 PF09907 HigB_toxin, RelE-like toxic component of a toxin-antitoxin system SUTH_00309 PF01061 ABC-2 type transporter SUTH_00310 PF02597 ThiS family SUTH_00310 PF05690 Thiazole biosynthesis protein ThiG SUTH_00311 PF05690 Thiazole biosynthesis protein ThiG SUTH_00313 PF02390 Putative methyltransferase SUTH_00314 PF08448 PAS fold SUTH_00314 PF00990 Diguanylate cyclase, GGDEF domain SUTH_00316 PF04055 Radical SAM superfamily SUTH_00316 PF06969 HemN C-terminal domain SUTH_00317 PF01725 Ham1 family SUTH_00318 PF01138 3' exoribonuclease family, domain 1 SUTH_00318 PF03725 3' exoribonuclease family, domain 2 SUTH_00320 PF00069 Protein kinase domain SUTH_00321 PF08340 Domain of unknown function (DUF1732) SUTH_00321 PF03755 YicC-like family, N-terminal region SUTH_00323 PF02203 Tar ligand binding domain homologue SUTH_00323 PF00672 HAMP domain SUTH_00323 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SUTH_00324 PF01584 CheW-like domain SUTH_00326 PF01842 ACT domain SUTH_00326 PF00551 Formyl transferase SUTH_00329 PF01488 Shikimate / quinate 5-dehydrogenase SUTH_00329 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain SUTH_00329 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain SUTH_00330 PF01553 Acyltransferase SUTH_00331 PF03462 PCRF domain SUTH_00331 PF00472 RF-1 domain SUTH_00332 PF05175 Methyltransferase small domain SUTH_00332 PF17827 PrmC N-terminal domain SUTH_00333 PF01814 Hemerythrin HHE cation binding domain SUTH_00334 PF13442 Cytochrome C oxidase, cbb3-type, subunit III SUTH_00335 PF01926 50S ribosome-binding GTPase SUTH_00336 PF00490 Delta-aminolevulinic acid dehydratase SUTH_00337 PF00440 Bacterial regulatory proteins, tetR family SUTH_00338 PF00696 Amino acid kinase family SUTH_00342 PF00545 ribonuclease SUTH_00343 PF02938 GAD domain SUTH_00343 PF00152 tRNA synthetases class II (D, K and N) SUTH_00343 PF01336 OB-fold nucleic acid binding domain SUTH_00346 PF01478 Type IV leader peptidase family SUTH_00346 PF06750 Bacterial Peptidase A24 N-terminal domain SUTH_00347 PF00482 Type II secretion system (T2SS), protein F SUTH_00348 PF03471 Transporter associated domain SUTH_00348 PF00571 CBS domain SUTH_00348 PF01595 Cyclin M transmembrane N-terminal domain SUTH_00350 PF00448 SRP54-type protein, GTPase domain SUTH_00350 PF02881 SRP54-type protein, helical bundle domain SUTH_00350 PF02978 Signal peptide binding domain SUTH_00351 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain SUTH_00351 PF01464 Transglycosylase SLT domain SUTH_00352 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) SUTH_00352 PF04073 Aminoacyl-tRNA editing domain SUTH_00352 PF03129 Anticodon binding domain SUTH_00353 PF00293 NUDIX domain SUTH_00355 PF03232 Ubiquinone biosynthesis protein COQ7 SUTH_00356 PF02566 OsmC-like protein SUTH_00361 PF00892 EamA-like transporter family SUTH_00362 PF00005 ABC transporter SUTH_00363 PF03379 CcmB protein SUTH_00364 PF01578 Cytochrome C assembly protein SUTH_00366 PF03100 CcmE SUTH_00367 PF01578 Cytochrome C assembly protein SUTH_00367 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal SUTH_00368 PF08534 Redoxin SUTH_00369 PF03918 Cytochrome C biogenesis protein SUTH_00372 PF01568 Molydopterin dinucleotide binding domain SUTH_00372 PF04879 Molybdopterin oxidoreductase Fe4S4 domain SUTH_00372 PF00384 Molybdopterin oxidoreductase SUTH_00373 PF12838 4Fe-4S dicluster domain SUTH_00373 PF12800 4Fe-4S binding domain SUTH_00374 PF13237 4Fe-4S dicluster domain SUTH_00374 PF12801 4Fe-4S binding domain SUTH_00375 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) SUTH_00376 PF12838 4Fe-4S dicluster domain SUTH_00376 PF13187 4Fe-4S dicluster domain SUTH_00378 PF01545 Cation efflux family SUTH_00380 PF00440 Bacterial regulatory proteins, tetR family SUTH_00382 PF13533 Biotin-lipoyl like SUTH_00384 PF02687 FtsX-like permease family SUTH_00384 PF00005 ABC transporter SUTH_00384 PF12704 MacB-like periplasmic core domain SUTH_00388 PF01758 Sodium Bile acid symporter family SUTH_00393 PF00990 Diguanylate cyclase, GGDEF domain SUTH_00393 PF03707 Bacterial signalling protein N terminal repeat SUTH_00393 PF00563 EAL domain SUTH_00394 PF00990 Diguanylate cyclase, GGDEF domain SUTH_00394 PF03707 Bacterial signalling protein N terminal repeat SUTH_00394 PF00563 EAL domain SUTH_00395 PF00581 Rhodanese-like domain SUTH_00396 PF04542 Sigma-70 region 2 SUTH_00396 PF08281 Sigma-70, region 4 SUTH_00397 PF02803 Thiolase, C-terminal domain SUTH_00397 PF00108 Thiolase, N-terminal domain SUTH_00399 PF00108 Thiolase, N-terminal domain SUTH_00399 PF02803 Thiolase, C-terminal domain SUTH_00404 PF00108 Thiolase, N-terminal domain SUTH_00404 PF02803 Thiolase, C-terminal domain SUTH_00409 PF04143 Sulphur transport SUTH_00411 PF01206 Sulfurtransferase TusA SUTH_00418 PF00581 Rhodanese-like domain SUTH_00426 PF04879 Molybdopterin oxidoreductase Fe4S4 domain SUTH_00426 PF00384 Molybdopterin oxidoreductase SUTH_00426 PF01568 Molydopterin dinucleotide binding domain SUTH_00426 PF10518 TAT (twin-arginine translocation) pathway signal sequence SUTH_00428 PF13247 4Fe-4S dicluster domain SUTH_00430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SUTH_00430 PF00512 His Kinase A (phospho-acceptor) domain SUTH_00430 PF00989 PAS fold SUTH_00431 PF02954 Bacterial regulatory protein, Fis family SUTH_00431 PF00158 Sigma-54 interaction domain SUTH_00431 PF00072 Response regulator receiver domain SUTH_00432 PF01209 ubiE/COQ5 methyltransferase family SUTH_00434 PF00158 Sigma-54 interaction domain SUTH_00434 PF00072 Response regulator receiver domain SUTH_00434 PF02954 Bacterial regulatory protein, Fis family SUTH_00435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SUTH_00435 PF00989 PAS fold SUTH_00435 PF00512 His Kinase A (phospho-acceptor) domain SUTH_00437 PF00384 Molybdopterin oxidoreductase SUTH_00437 PF04879 Molybdopterin oxidoreductase Fe4S4 domain SUTH_00437 PF01568 Molydopterin dinucleotide binding domain SUTH_00438 PF13247 4Fe-4S dicluster domain SUTH_00438 PF00037 4Fe-4S binding domain SUTH_00440 PF01209 ubiE/COQ5 methyltransferase family SUTH_00444 PF00512 His Kinase A (phospho-acceptor) domain SUTH_00444 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SUTH_00445 PF00072 Response regulator receiver domain SUTH_00445 PF02954 Bacterial regulatory protein, Fis family SUTH_00445 PF00158 Sigma-54 interaction domain SUTH_00451 PF04607 Region found in RelA / SpoT proteins SUTH_00451 PF02824 TGS domain SUTH_00451 PF13291 ACT domain SUTH_00452 PF01192 RNA polymerase Rpb6 SUTH_00453 PF00625 Guanylate kinase SUTH_00456 PF07690 Major Facilitator Superfamily SUTH_00462 PF13380 CoA binding domain SUTH_00462 PF13607 Succinyl-CoA ligase like flavodoxin domain SUTH_00462 PF00583 Acetyltransferase (GNAT) family SUTH_00470 PF00753 Metallo-beta-lactamase superfamily SUTH_00471 PF01078 Magnesium chelatase, subunit ChlI SUTH_00471 PF13335 Magnesium chelatase, subunit ChlI C-terminal SUTH_00479 PF01609 Transposase DDE domain SUTH_00492 PF00672 HAMP domain SUTH_00492 PF16750 Sensor domain of 2-component histidine kinase SUTH_00492 PF00512 His Kinase A (phospho-acceptor) domain SUTH_00492 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SUTH_00493 PF00486 Transcriptional regulatory protein, C terminal SUTH_00493 PF00072 Response regulator receiver domain SUTH_00497 PF12704 MacB-like periplasmic core domain SUTH_00497 PF00005 ABC transporter SUTH_00497 PF02687 FtsX-like permease family SUTH_00498 PF02687 FtsX-like permease family SUTH_00498 PF00005 ABC transporter SUTH_00498 PF12704 MacB-like periplasmic core domain SUTH_00500 PF02321 Outer membrane efflux protein SUTH_00502 PF01047 MarR family SUTH_00504 PF00884 Sulfatase SUTH_00506 PF00884 Sulfatase SUTH_00507 PF13193 AMP-binding enzyme C-terminal domain SUTH_00507 PF00501 AMP-binding enzyme SUTH_00511 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SUTH_00511 PF03466 LysR substrate binding domain SUTH_00513 PF07690 Major Facilitator Superfamily SUTH_00514 PF05199 GMC oxidoreductase SUTH_00514 PF00732 GMC oxidoreductase SUTH_00515 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain SUTH_00515 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain SUTH_00517 PF13186 Iron-sulfur cluster-binding domain SUTH_00517 PF04055 Radical SAM superfamily SUTH_00522 PF13335 Magnesium chelatase, subunit ChlI C-terminal SUTH_00522 PF01078 Magnesium chelatase, subunit ChlI SUTH_00523 PF04380 Membrane fusogenic activity SUTH_00525 PF00543 Nitrogen regulatory protein P-II SUTH_00526 PF00909 Ammonium Transporter Family SUTH_00527 PF17200 Single Cache domain 2 SUTH_00527 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SUTH_00527 PF00672 HAMP domain SUTH_00529 PF00561 alpha/beta hydrolase fold SUTH_00529 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus SUTH_00531 PF13411 MerR HTH family regulatory protein SUTH_00533 PF02771 Acyl-CoA dehydrogenase, N-terminal domain SUTH_00533 PF02770 Acyl-CoA dehydrogenase, middle domain SUTH_00533 PF00441 Acyl-CoA dehydrogenase, C-terminal domain SUTH_00536 PF00484 Carbonic anhydrase SUTH_00537 PF02803 Thiolase, C-terminal domain SUTH_00537 PF00108 Thiolase, N-terminal domain SUTH_00538 PF00378 Enoyl-CoA hydratase/isomerase SUTH_00539 PF02771 Acyl-CoA dehydrogenase, N-terminal domain SUTH_00539 PF00441 Acyl-CoA dehydrogenase, C-terminal domain SUTH_00539 PF02770 Acyl-CoA dehydrogenase, middle domain SUTH_00540 PF09957 Bacterial antitoxin of type II TA system, VapB SUTH_00542 PF01323 DSBA-like thioredoxin domain SUTH_00543 PF01039 Carboxyl transferase domain SUTH_00544 PF00378 Enoyl-CoA hydratase/isomerase SUTH_00545 PF02785 Biotin carboxylase C-terminal domain SUTH_00545 PF00289 Biotin carboxylase, N-terminal domain SUTH_00545 PF00364 Biotin-requiring enzyme SUTH_00545 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain SUTH_00546 PF00682 HMGL-like SUTH_00548 PF00753 Metallo-beta-lactamase superfamily SUTH_00548 PF16123 Hydroxyacylglutathione hydrolase C-terminus SUTH_00550 PF03668 P-loop ATPase protein family SUTH_00554 PF00730 HhH-GPD superfamily base excision DNA repair protein SUTH_00554 PF14815 NUDIX domain SUTH_00554 PF00633 Helix-hairpin-helix motif SUTH_00554 PF10576 Iron-sulfur binding domain of endonuclease III SUTH_00555 PF01370 NAD dependent epimerase/dehydratase family SUTH_00555 PF02222 ATP-grasp domain SUTH_00556 PF01613 Flavin reductase like domain SUTH_00564 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SUTH_00564 PF03466 LysR substrate binding domain SUTH_00565 PF10672 S-adenosylmethionine-dependent methyltransferase SUTH_00565 PF17785 PUA-like domain SUTH_00566 PF07669 Eco57I restriction-modification methylase SUTH_00567 PF06616 BsuBI/PstI restriction endonuclease domain SUTH_00567 PF17728 BsuBI/PstI restriction endonuclease HTH domain SUTH_00573 PF00227 Proteasome subunit SUTH_00574 PF07724 AAA domain (Cdc48 subfamily) SUTH_00574 PF10431 C-terminal, D2-small domain, of ClpB protein SUTH_00574 PF00004 ATPase family associated with various cellular activities (AAA) SUTH_00576 PF03781 Sulfatase-modifying factor enzyme 1 SUTH_00578 PF17820 PDZ domain SUTH_00578 PF13180 PDZ domain SUTH_00580 PF00873 AcrB/AcrD/AcrF family SUTH_00582 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain SUTH_00582 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain SUTH_00583 PF01491 Frataxin-like domain SUTH_00584 PF00905 Penicillin binding protein transpeptidase domain SUTH_00584 PF17092 Penicillin-binding protein OB-like domain SUTH_00584 PF00912 Transglycosylase SUTH_00585 PF00012 Hsp70 protein SUTH_00589 PF03958 Bacterial type II/III secretion system short domain SUTH_00589 PF11741 AMIN domain SUTH_00589 PF00263 Bacterial type II and III secretion system protein SUTH_00589 PF07660 Secretin and TonB N terminus short domain SUTH_00590 PF01202 Shikimate kinase SUTH_00591 PF01761 3-dehydroquinate synthase SUTH_00592 PF13286 Phosphohydrolase-associated domain SUTH_00592 PF01966 HD domain SUTH_00593 PF04898 Glutamate synthase central domain SUTH_00593 PF00310 Glutamine amidotransferases class-II SUTH_00593 PF01645 Conserved region in glutamate synthase SUTH_00593 PF01493 GXGXG motif SUTH_00594 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster SUTH_00594 PF07992 Pyridine nucleotide-disulphide oxidoreductase SUTH_00595 PF00132 Bacterial transferase hexapeptide (six repeats) SUTH_00595 PF12804 MobA-like NTP transferase domain SUTH_00596 PF01380 SIS domain SUTH_00598 PF04304 Protein of unknown function (DUF454) SUTH_00599 PF00679 Elongation factor G C-terminus SUTH_00599 PF14492 Elongation Factor G, domain II SUTH_00599 PF03764 Elongation factor G, domain IV SUTH_00599 PF00009 Elongation factor Tu GTP binding domain SUTH_00600 PF04945 YHS domain SUTH_00606 PF00873 AcrB/AcrD/AcrF family SUTH_00610 PF00072 Response regulator receiver domain SUTH_00610 PF00486 Transcriptional regulatory protein, C terminal SUTH_00611 PF00672 HAMP domain SUTH_00611 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SUTH_00611 PF00512 His Kinase A (phospho-acceptor) domain SUTH_00614 PF00873 AcrB/AcrD/AcrF family SUTH_00615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SUTH_00616 PF00196 Bacterial regulatory proteins, luxR family SUTH_00616 PF00072 Response regulator receiver domain SUTH_00620 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term SUTH_00620 PF12833 Helix-turn-helix domain SUTH_00621 PF01642 Methylmalonyl-CoA mutase SUTH_00621 PF02310 B12 binding domain SUTH_00623 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain SUTH_00623 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain SUTH_00625 PF00501 AMP-binding enzyme SUTH_00626 PF12399 Branched-chain amino acid ATP-binding cassette transporter SUTH_00626 PF00005 ABC transporter SUTH_00630 PF00005 ABC transporter SUTH_00632 PF02515 CoA-transferase family III SUTH_00635 PF00072 Response regulator receiver domain SUTH_00635 PF00196 Bacterial regulatory proteins, luxR family SUTH_00639 PF02913 FAD linked oxidases, C-terminal domain SUTH_00639 PF01565 FAD binding domain SUTH_00643 PF03143 Elongation factor Tu C-terminal domain SUTH_00643 PF00009 Elongation factor Tu GTP binding domain SUTH_00643 PF03144 Elongation factor Tu domain 2 SUTH_00645 PF00584 SecE/Sec61-gamma subunits of protein translocation complex SUTH_00646 PF00467 KOW motif SUTH_00646 PF02357 Transcription termination factor nusG SUTH_00647 PF00298 Ribosomal protein L11, RNA binding domain SUTH_00647 PF03946 Ribosomal protein L11, N-terminal domain SUTH_00648 PF00687 Ribosomal protein L1p/L10e family SUTH_00649 PF00466 Ribosomal protein L10 SUTH_00650 PF00542 Ribosomal protein L7/L12 C-terminal domain SUTH_00650 PF16320 Ribosomal protein L7/L12 dimerisation domain SUTH_00651 PF04561 RNA polymerase Rpb2, domain 2 SUTH_00651 PF04560 RNA polymerase Rpb2, domain 7 SUTH_00651 PF00562 RNA polymerase Rpb2, domain 6 SUTH_00651 PF10385 RNA polymerase beta subunit external 1 domain SUTH_00651 PF04563 RNA polymerase beta subunit SUTH_00651 PF04565 RNA polymerase Rpb2, domain 3 SUTH_00652 PF04997 RNA polymerase Rpb1, domain 1 SUTH_00652 PF04998 RNA polymerase Rpb1, domain 5 SUTH_00652 PF04983 RNA polymerase Rpb1, domain 3 SUTH_00652 PF05000 RNA polymerase Rpb1, domain 4 SUTH_00652 PF00623 RNA polymerase Rpb1, domain 2 SUTH_00653 PF00164 Ribosomal protein S12/S23 SUTH_00654 PF00177 Ribosomal protein S7p/S5e SUTH_00655 PF03144 Elongation factor Tu domain 2 SUTH_00655 PF03764 Elongation factor G, domain IV SUTH_00655 PF14492 Elongation Factor G, domain II SUTH_00655 PF00009 Elongation factor Tu GTP binding domain SUTH_00655 PF00679 Elongation factor G C-terminus SUTH_00656 PF00009 Elongation factor Tu GTP binding domain SUTH_00656 PF03143 Elongation factor Tu C-terminal domain SUTH_00656 PF03144 Elongation factor Tu domain 2 SUTH_00657 PF00338 Ribosomal protein S10p/S20e SUTH_00658 PF00297 Ribosomal protein L3 SUTH_00659 PF00573 Ribosomal protein L4/L1 family SUTH_00660 PF00276 Ribosomal protein L23 SUTH_00661 PF00181 Ribosomal Proteins L2, RNA binding domain SUTH_00661 PF03947 Ribosomal Proteins L2, C-terminal domain SUTH_00662 PF00203 Ribosomal protein S19 SUTH_00663 PF00237 Ribosomal protein L22p/L17e SUTH_00664 PF00189 Ribosomal protein S3, C-terminal domain SUTH_00664 PF07650 KH domain SUTH_00665 PF00252 Ribosomal protein L16p/L10e SUTH_00666 PF00831 Ribosomal L29 protein SUTH_00667 PF00366 Ribosomal protein S17 SUTH_00668 PF00238 Ribosomal protein L14p/L23e SUTH_00669 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 SUTH_00670 PF00673 ribosomal L5P family C-terminus SUTH_00670 PF00281 Ribosomal protein L5 SUTH_00671 PF00253 Ribosomal protein S14p/S29e SUTH_00672 PF00410 Ribosomal protein S8 SUTH_00673 PF00347 Ribosomal protein L6 SUTH_00674 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast SUTH_00675 PF00333 Ribosomal protein S5, N-terminal domain SUTH_00675 PF03719 Ribosomal protein S5, C-terminal domain SUTH_00676 PF00327 Ribosomal protein L30p/L7e SUTH_00677 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A SUTH_00678 PF00344 SecY translocase SUTH_00679 PF01176 Translation initiation factor 1A / IF-1 SUTH_00680 PF00416 Ribosomal protein S13/S18 SUTH_00681 PF00411 Ribosomal protein S11 SUTH_00682 PF00163 Ribosomal protein S4/S9 N-terminal domain SUTH_00682 PF01479 S4 domain SUTH_00683 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain SUTH_00683 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain SUTH_00683 PF01000 RNA polymerase Rpb3/RpoA insert domain SUTH_00684 PF01196 Ribosomal protein L17 SUTH_00685 PF00009 Elongation factor Tu GTP binding domain SUTH_00686 PF01507 Phosphoadenosine phosphosulfate reductase family SUTH_00687 PF01507 Phosphoadenosine phosphosulfate reductase family SUTH_00689 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain SUTH_00689 PF01077 Nitrite and sulphite reductase 4Fe-4S domain SUTH_00690 PF01925 Sulfite exporter TauE/SafE SUTH_00691 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SUTH_00691 PF03466 LysR substrate binding domain SUTH_00693 PF04751 Protein of unknown function (DUF615) SUTH_00694 PF01523 Putative modulator of DNA gyrase SUTH_00696 PF05175 Methyltransferase small domain SUTH_00697 PF00563 EAL domain SUTH_00697 PF00990 Diguanylate cyclase, GGDEF domain SUTH_00697 PF03707 Bacterial signalling protein N terminal repeat SUTH_00699 PF03480 Bacterial extracellular solute-binding protein, family 7 SUTH_00700 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component SUTH_00702 PF00392 Bacterial regulatory proteins, gntR family SUTH_00702 PF07729 FCD domain SUTH_00703 PF00300 Histidine phosphatase superfamily (branch 1) SUTH_00704 PF00464 Serine hydroxymethyltransferase SUTH_00705 PF03477 ATP cone domain SUTH_00706 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region SUTH_00706 PF01872 RibD C-terminal domain SUTH_00708 PF00899 ThiF family SUTH_00710 PF03572 Peptidase family S41 SUTH_00710 PF13180 PDZ domain SUTH_00711 PF01551 Peptidase family M23 SUTH_00712 PF00300 Histidine phosphatase superfamily (branch 1) SUTH_00713 PF01022 Bacterial regulatory protein, arsR family SUTH_00714 PF00581 Rhodanese-like domain SUTH_00715 PF00462 Glutaredoxin SUTH_00716 PF02556 Preprotein translocase subunit SecB SUTH_00718 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus SUTH_00718 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus SUTH_00719 PF00588 SpoU rRNA Methylase family SUTH_00720 PF00437 Type II/IV secretion system protein SUTH_00721 PF00482 Type II secretion system (T2SS), protein F SUTH_00723 PF07963 Prokaryotic N-terminal methylation motif SUTH_00723 PF00114 Pilin (bacterial filament) SUTH_00724 PF07963 Prokaryotic N-terminal methylation motif SUTH_00724 PF00114 Pilin (bacterial filament) SUTH_00731 PF01471 Putative peptidoglycan binding domain SUTH_00731 PF13401 AAA domain SUTH_00734 PF00156 Phosphoribosyl transferase domain SUTH_00735 PF06968 Biotin and Thiamin Synthesis associated domain SUTH_00735 PF04055 Radical SAM superfamily SUTH_00736 PF08241 Methyltransferase domain SUTH_00738 PF17831 Pyruvate dehydrogenase E1 component middle domain SUTH_00738 PF00456 Transketolase, thiamine diphosphate binding domain SUTH_00739 PF02817 e3 binding domain SUTH_00739 PF00364 Biotin-requiring enzyme SUTH_00739 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) SUTH_00741 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain SUTH_00741 PF07992 Pyridine nucleotide-disulphide oxidoreductase SUTH_00742 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) SUTH_00743 PF01895 PhoU domain SUTH_00744 PF04362 Bacterial Fe(2+) trafficking SUTH_00746 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SUTH_00746 PF03466 LysR substrate binding domain SUTH_00747 PF17954 Quercetinase C-terminal cupin domain SUTH_00747 PF02678 Pirin SUTH_00748 PF03358 NADPH-dependent FMN reductase SUTH_00749 PF00696 Amino acid kinase family SUTH_00749 PF00583 Acetyltransferase (GNAT) family SUTH_00750 PF03976 Polyphosphate kinase 2 (PPK2) SUTH_00751 PF04452 RNA methyltransferase SUTH_00754 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SUTH_00754 PF03466 LysR substrate binding domain SUTH_00755 PF00990 Diguanylate cyclase, GGDEF domain SUTH_00755 PF00563 EAL domain SUTH_00755 PF03707 Bacterial signalling protein N terminal repeat SUTH_00756 PF13419 Haloacid dehalogenase-like hydrolase SUTH_00757 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain SUTH_00757 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain SUTH_00758 PF08406 CbbQ/NirQ/NorQ C-terminal SUTH_00758 PF07728 AAA domain (dynein-related subfamily) SUTH_00759 PF00092 von Willebrand factor type A domain SUTH_00761 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain SUTH_00762 PF00485 Phosphoribulokinase / Uridine kinase family SUTH_00763 PF02779 Transketolase, pyrimidine binding domain SUTH_00763 PF02780 Transketolase, C-terminal domain SUTH_00763 PF00456 Transketolase, thiamine diphosphate binding domain SUTH_00764 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain SUTH_00764 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain SUTH_00765 PF00162 Phosphoglycerate kinase SUTH_00766 PF02887 Pyruvate kinase, alpha/beta domain SUTH_00766 PF00224 Pyruvate kinase, barrel domain SUTH_00767 PF01116 Fructose-bisphosphate aldolase class-II SUTH_00769 PF01259 SAICAR synthetase SUTH_00771 PF01432 Peptidase family M3 SUTH_00772 PF07238 PilZ domain SUTH_00774 PF03372 Endonuclease/Exonuclease/phosphatase family SUTH_00779 PF00398 Ribosomal RNA adenine dimethylase SUTH_00780 PF13230 Glutamine amidotransferases class-II SUTH_00781 PF04166 Pyridoxal phosphate biosynthetic protein PdxA SUTH_00782 PF09312 SurA N-terminal domain SUTH_00782 PF00639 PPIC-type PPIASE domain SUTH_00783 PF04453 LPS transport system D SUTH_00783 PF03968 OstA-like protein SUTH_00784 PF01636 Phosphotransferase enzyme family SUTH_00785 PF00483 Nucleotidyl transferase SUTH_00786 PF00557 Metallopeptidase family M24 SUTH_00786 PF05195 Aminopeptidase P, N-terminal domain SUTH_00787 PF01494 FAD binding domain SUTH_00788 PF01207 Dihydrouridine synthase (Dus) SUTH_00789 PF02954 Bacterial regulatory protein, Fis family SUTH_00790 PF02142 MGS-like domain SUTH_00790 PF01808 AICARFT/IMPCHase bienzyme SUTH_00791 PF02844 Phosphoribosylglycinamide synthetase, N domain SUTH_00791 PF02843 Phosphoribosylglycinamide synthetase, C domain SUTH_00791 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain SUTH_00792 PF02222 ATP-grasp domain SUTH_00792 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain SUTH_00793 PF01300 Telomere recombination SUTH_00793 PF03481 Putative GTP-binding controlling metal-binding SUTH_00799 PF13416 Bacterial extracellular solute-binding protein SUTH_00800 PF03009 Glycerophosphoryl diester phosphodiesterase family SUTH_00802 PF02272 DHHA1 domain SUTH_00802 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain SUTH_00802 PF01411 tRNA synthetases class II (A) SUTH_00804 PF05015 RelE-like toxin of type II toxin-antitoxin system HigB SUTH_00805 PF01381 Helix-turn-helix SUTH_00806 PF01555 DNA methylase SUTH_00809 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain SUTH_00809 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II SUTH_00809 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III SUTH_00809 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I SUTH_00810 PF00561 alpha/beta hydrolase fold SUTH_00812 PF01075 Glycosyltransferase family 9 (heptosyltransferase) SUTH_00814 PF01063 Amino-transferase class IV SUTH_00817 PF00216 Bacterial DNA-binding protein SUTH_00819 PF00581 Rhodanese-like domain SUTH_00820 PF08331 Domain of unknown function (DUF1730) SUTH_00821 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE SUTH_00822 PF11741 AMIN domain SUTH_00822 PF01520 N-acetylmuramoyl-L-alanine amidase SUTH_00823 PF01687 Riboflavin kinase SUTH_00823 PF06574 FAD synthetase SUTH_00825 PF08264 Anticodon-binding domain of tRNA SUTH_00825 PF06827 Zinc finger found in FPG and IleRS SUTH_00825 PF00133 tRNA synthetases class I (I, L, M and V) SUTH_00826 PF01252 Signal peptidase (SPase) II SUTH_00827 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase SUTH_00828 PF02401 LytB protein SUTH_00835 PF00403 Heavy-metal-associated domain SUTH_00837 PF00115 Cytochrome C and Quinol oxidase polypeptide I SUTH_00840 PF13442 Cytochrome C oxidase, cbb3-type, subunit III SUTH_00840 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP SUTH_00841 PF13746 4Fe-4S dicluster domain SUTH_00841 PF12801 4Fe-4S binding domain SUTH_00841 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase SUTH_00845 PF00582 Universal stress protein family SUTH_00846 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus SUTH_00846 PF00561 alpha/beta hydrolase fold SUTH_00853 PF00027 Cyclic nucleotide-binding domain SUTH_00853 PF13545 Crp-like helix-turn-helix domain SUTH_00854 PF04055 Radical SAM superfamily SUTH_00854 PF06969 HemN C-terminal domain SUTH_00856 PF00581 Rhodanese-like domain SUTH_00857 PF00403 Heavy-metal-associated domain SUTH_00858 PF00403 Heavy-metal-associated domain SUTH_00859 PF00210 Ferritin-like domain SUTH_00860 PF13192 Thioredoxin domain SUTH_00860 PF07992 Pyridine nucleotide-disulphide oxidoreductase SUTH_00861 PF00578 AhpC/TSA family SUTH_00861 PF10417 C-terminal domain of 1-Cys peroxiredoxin SUTH_00862 PF04851 Type III restriction enzyme, res subunit SUTH_00862 PF08463 EcoEI R protein C-terminal SUTH_00862 PF00271 Helicase conserved C-terminal domain SUTH_00862 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) SUTH_00864 PF12801 4Fe-4S binding domain SUTH_00864 PF04205 FMN-binding domain SUTH_00867 PF10634 Fe2+ transport protein SUTH_00869 PF00719 Inorganic pyrophosphatase SUTH_00870 PF02540 NAD synthase SUTH_00870 PF00795 Carbon-nitrogen hydrolase SUTH_00871 PF00543 Nitrogen regulatory protein P-II SUTH_00872 PF01713 Smr domain SUTH_00873 PF07992 Pyridine nucleotide-disulphide oxidoreductase SUTH_00878 PF09397 Ftsk gamma domain SUTH_00878 PF01580 FtsK/SpoIIIE family SUTH_00878 PF17854 FtsK alpha domain SUTH_00878 PF13491 4TM region of DNA translocase FtsK/SpoIIIE SUTH_00879 PF03548 Outer membrane lipoprotein carrier protein LolA SUTH_00880 PF12002 MgsA AAA+ ATPase C terminal SUTH_00880 PF16193 AAA C-terminal domain SUTH_00880 PF00004 ATPase family associated with various cellular activities (AAA) SUTH_00881 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) SUTH_00881 PF02403 Seryl-tRNA synthetase N-terminal domain SUTH_00882 PF00497 Bacterial extracellular solute-binding proteins, family 3 SUTH_00882 PF01464 Transglycosylase SLT domain SUTH_00884 PF08497 Radical SAM N-terminal SUTH_00884 PF04055 Radical SAM superfamily SUTH_00884 PF11842 Domain of unknown function (DUF3362) SUTH_00887 PF09297 NADH pyrophosphatase zinc ribbon domain SUTH_00887 PF00293 NUDIX domain SUTH_00888 PF05247 Flagellar transcriptional activator (FlhD) SUTH_00889 PF05280 Flagellar transcriptional activator (FlhC) SUTH_00890 PF01618 MotA/TolQ/ExbB proton channel family SUTH_00891 PF00691 OmpA family SUTH_00891 PF13677 Membrane MotB of proton-channel complex MotA/MotB SUTH_00892 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SUTH_00892 PF00672 HAMP domain SUTH_00892 PF02743 Cache domain SUTH_00894 PF09078 CheY binding SUTH_00894 PF02895 Signal transducing histidine kinase, homodimeric domain SUTH_00894 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SUTH_00894 PF01627 Hpt domain SUTH_00894 PF01584 CheW-like domain SUTH_00895 PF01584 CheW-like domain SUTH_00896 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SUTH_00896 PF08447 PAS fold SUTH_00896 PF08447 PAS fold SUTH_00896 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SUTH_00897 PF03705 CheR methyltransferase, all-alpha domain SUTH_00897 PF01739 CheR methyltransferase, SAM binding domain SUTH_00898 PF03975 CheD chemotactic sensory transduction SUTH_00899 PF00072 Response regulator receiver domain SUTH_00899 PF01339 CheB methylesterase SUTH_00900 PF13466 STAS domain SUTH_00901 PF01590 GAF domain SUTH_00901 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SUTH_00902 PF00072 Response regulator receiver domain SUTH_00902 PF01584 CheW-like domain SUTH_00903 PF00072 Response regulator receiver domain SUTH_00903 PF01584 CheW-like domain SUTH_00904 PF00072 Response regulator receiver domain SUTH_00905 PF04344 Chemotaxis phosphatase, CheZ SUTH_00906 PF01584 CheW-like domain SUTH_00906 PF02895 Signal transducing histidine kinase, homodimeric domain SUTH_00906 PF01627 Hpt domain SUTH_00906 PF07194 P2 response regulator binding domain SUTH_00906 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SUTH_00907 PF01312 FlhB HrpN YscU SpaS Family SUTH_00908 PF00771 FHIPEP family SUTH_00909 PF00448 SRP54-type protein, GTPase domain SUTH_00911 PF04539 Sigma-70 region 3 SUTH_00911 PF04545 Sigma-70, region 4 SUTH_00911 PF04542 Sigma-70 region 2 SUTH_00912 PF01618 MotA/TolQ/ExbB proton channel family SUTH_00913 PF00691 OmpA family SUTH_00913 PF13677 Membrane MotB of proton-channel complex MotA/MotB SUTH_00916 PF13144 Chaperone for flagella basal body P-ring formation SUTH_00917 PF00460 Flagella basal body rod protein SUTH_00918 PF00460 Flagella basal body rod protein SUTH_00918 PF06429 Flagellar basal body rod FlgEFG protein C-terminal SUTH_00919 PF13861 FlgD Tudor-like domain SUTH_00919 PF13860 FlgD Ig-like domain SUTH_00919 PF03963 Flagellar hook capping protein - N-terminal region SUTH_00920 PF00460 Flagella basal body rod protein SUTH_00920 PF07559 Flagellar basal body protein FlaE SUTH_00920 PF06429 Flagellar basal body rod FlgEFG protein C-terminal SUTH_00921 PF00460 Flagella basal body rod protein SUTH_00921 PF06429 Flagellar basal body rod FlgEFG protein C-terminal SUTH_00922 PF07559 Flagellar basal body protein FlaE SUTH_00922 PF00460 Flagella basal body rod protein SUTH_00922 PF06429 Flagellar basal body rod FlgEFG protein C-terminal SUTH_00923 PF00460 Flagella basal body rod protein SUTH_00923 PF06429 Flagellar basal body rod FlgEFG protein C-terminal SUTH_00924 PF02107 Flagellar L-ring protein SUTH_00925 PF02119 Flagellar P-ring protein SUTH_00926 PF10135 Rod binding protein SUTH_00926 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase SUTH_00927 PF06429 Flagellar basal body rod FlgEFG protein C-terminal SUTH_00927 PF00460 Flagella basal body rod protein SUTH_00928 PF00669 Bacterial flagellin N-terminal helical region SUTH_00930 PF01311 Bacterial export proteins, family 1 SUTH_00931 PF01313 Bacterial export proteins, family 3 SUTH_00932 PF00813 FliP family SUTH_00933 PF04347 Flagellar biosynthesis protein, FliO SUTH_00934 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term SUTH_00934 PF16973 Flagellar motor switch protein FliN N-terminal SUTH_00935 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term SUTH_00935 PF02154 Flagellar motor switch protein FliM SUTH_00939 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain SUTH_00939 PF18269 T3SS EscN ATPase C-terminal domain SUTH_00940 PF02108 Flagellar assembly protein FliH SUTH_00941 PF14842 FliG N-terminal domain SUTH_00941 PF14841 FliG middle domain SUTH_00941 PF01706 FliG C-terminal domain SUTH_00942 PF01514 Secretory protein of YscJ/FliF family SUTH_00942 PF08345 Flagellar M-ring protein C-terminal SUTH_00943 PF00512 His Kinase A (phospho-acceptor) domain SUTH_00943 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SUTH_00944 PF00072 Response regulator receiver domain SUTH_00944 PF00158 Sigma-54 interaction domain SUTH_00944 PF02954 Bacterial regulatory protein, Fis family SUTH_00945 PF02049 Flagellar hook-basal body complex protein FliE SUTH_00946 PF02321 Outer membrane efflux protein SUTH_00947 PF00529 HlyD membrane-fusion protein of T1SS SUTH_00948 PF00005 ABC transporter SUTH_00948 PF00664 ABC transporter transmembrane region SUTH_00953 PF00534 Glycosyl transferases group 1 SUTH_00953 PF13439 Glycosyltransferase Family 4 SUTH_00955 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) SUTH_00955 PF06594 Haemolysin-type calcium binding protein related domain SUTH_00956 PF10119 Predicted methyltransferase regulatory domain SUTH_00956 PF13847 Methyltransferase domain SUTH_00958 PF04381 Putative exonuclease, RdgC SUTH_00960 PF07238 PilZ domain SUTH_00960 PF07317 Flagellar regulator YcgR SUTH_00961 PF01312 FlhB HrpN YscU SpaS Family SUTH_00965 PF02465 Flagellar hook-associated protein 2 N-terminus SUTH_00965 PF07195 Flagellar hook-associated protein 2 C-terminus SUTH_00967 PF00669 Bacterial flagellin N-terminal helical region SUTH_00967 PF00700 Bacterial flagellin C-terminal helical region SUTH_00968 PF00700 Bacterial flagellin C-terminal helical region SUTH_00968 PF00669 Bacterial flagellin N-terminal helical region SUTH_00970 PF07690 Major Facilitator Superfamily SUTH_00971 PF01272 Transcription elongation factor, GreA/GreB, C-term SUTH_00971 PF03449 Transcription elongation factor, N-terminal SUTH_00972 PF02628 Cytochrome oxidase assembly protein SUTH_00973 PF01967 MoaC family SUTH_00974 PF01435 Peptidase family M48 SUTH_00974 PF13181 Tetratricopeptide repeat SUTH_00975 PF07728 AAA domain (dynein-related subfamily) SUTH_00975 PF08406 CbbQ/NirQ/NorQ C-terminal SUTH_00978 PF00581 Rhodanese-like domain SUTH_00979 PF02635 DsrE/DsrF-like family SUTH_00981 PF13746 4Fe-4S dicluster domain SUTH_00981 PF12801 4Fe-4S binding domain SUTH_00981 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase SUTH_00983 PF00175 Oxidoreductase NAD-binding domain SUTH_00983 PF00970 Oxidoreductase FAD-binding domain SUTH_00986 PF01883 Iron-sulfur cluster assembly protein SUTH_00987 PF02082 Transcriptional regulator SUTH_00991 PF04358 DsrC like protein SUTH_00998 PF02911 Formyl transferase, C-terminal domain SUTH_00998 PF00551 Formyl transferase SUTH_00999 PF00501 AMP-binding enzyme SUTH_00999 PF13193 AMP-binding enzyme C-terminal domain SUTH_01000 PF08889 WbqC-like protein family SUTH_01001 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family SUTH_01002 PF08376 Nitrate and nitrite sensing SUTH_01002 PF03861 ANTAR domain SUTH_01004 PF00528 Binding-protein-dependent transport system inner membrane component SUTH_01005 PF00005 ABC transporter SUTH_01006 PF04324 BFD-like [2Fe-2S] binding domain SUTH_01006 PF01077 Nitrite and sulphite reductase 4Fe-4S domain SUTH_01006 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain SUTH_01006 PF07992 Pyridine nucleotide-disulphide oxidoreductase SUTH_01006 PF18267 Rubredoxin NAD+ reductase C-terminal domain SUTH_01008 PF01568 Molydopterin dinucleotide binding domain SUTH_01008 PF04879 Molybdopterin oxidoreductase Fe4S4 domain SUTH_01008 PF04324 BFD-like [2Fe-2S] binding domain SUTH_01008 PF00384 Molybdopterin oxidoreductase SUTH_01009 PF04879 Molybdopterin oxidoreductase Fe4S4 domain SUTH_01009 PF01568 Molydopterin dinucleotide binding domain SUTH_01009 PF04324 BFD-like [2Fe-2S] binding domain SUTH_01009 PF00384 Molybdopterin oxidoreductase SUTH_01010 PF00498 FHA domain SUTH_01010 PF12401 Protein of unknown function (DUF2662) SUTH_01011 PF03793 PASTA domain SUTH_01011 PF00069 Protein kinase domain SUTH_01012 PF00183 Hsp90 protein SUTH_01012 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SUTH_01014 PF00343 Carbohydrate phosphorylase SUTH_01019 PF01323 DSBA-like thioredoxin domain SUTH_01020 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) SUTH_01020 PF00072 Response regulator receiver domain SUTH_01020 PF01627 Hpt domain SUTH_01020 PF00512 His Kinase A (phospho-acceptor) domain SUTH_01020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SUTH_01020 PF00672 HAMP domain SUTH_01022 PF01557 Fumarylacetoacetate (FAA) hydrolase family SUTH_01025 PF00437 Type II/IV secretion system protein SUTH_01025 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain SUTH_01032 PF17862 AAA+ lid domain SUTH_01032 PF01434 Peptidase family M41 SUTH_01032 PF00004 ATPase family associated with various cellular activities (AAA) SUTH_01034 PF10576 Iron-sulfur binding domain of endonuclease III SUTH_01034 PF00633 Helix-hairpin-helix motif SUTH_01034 PF00730 HhH-GPD superfamily base excision DNA repair protein SUTH_01035 PF02508 Rnf-Nqr subunit, membrane protein SUTH_01036 PF04205 FMN-binding domain SUTH_01037 PF03116 NQR2, RnfD, RnfE family SUTH_01038 PF12838 4Fe-4S dicluster domain SUTH_01038 PF13375 RnfC Barrel sandwich hybrid domain SUTH_01038 PF10531 SLBB domain SUTH_01038 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit SUTH_01039 PF04060 Putative Fe-S cluster SUTH_01040 PF02508 Rnf-Nqr subunit, membrane protein SUTH_01041 PF01180 Dihydroorotate dehydrogenase SUTH_01047 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit SUTH_01049 PF01171 PP-loop family SUTH_01049 PF09179 TilS substrate binding domain SUTH_01049 PF11734 TilS substrate C-terminal domain SUTH_01050 PF00072 Response regulator receiver domain SUTH_01050 PF00196 Bacterial regulatory proteins, luxR family SUTH_01051 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SUTH_01051 PF00512 His Kinase A (phospho-acceptor) domain SUTH_01051 PF00989 PAS fold SUTH_01052 PF03480 Bacterial extracellular solute-binding protein, family 7 SUTH_01053 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component SUTH_01054 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component SUTH_01056 PF04055 Radical SAM superfamily SUTH_01059 PF04551 GcpE protein SUTH_01060 PF03129 Anticodon binding domain SUTH_01060 PF13393 Histidyl-tRNA synthetase SUTH_01061 PF09976 Tetratricopeptide repeat-like domain SUTH_01062 PF13360 PQQ-like domain SUTH_01063 PF01926 50S ribosome-binding GTPase SUTH_01063 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal SUTH_01064 PF17209 Hfq protein SUTH_01065 PF01926 50S ribosome-binding GTPase SUTH_01065 PF16360 GTP-binding GTPase Middle Region SUTH_01065 PF13167 GTP-binding GTPase N-terminal SUTH_01066 PF12221 Bacterial membrane protein N terminal SUTH_01066 PF01145 SPFH domain / Band 7 family SUTH_01067 PF01145 SPFH domain / Band 7 family SUTH_01069 PF13393 Histidyl-tRNA synthetase SUTH_01070 PF00709 Adenylosuccinate synthetase SUTH_01072 PF08206 Ribonuclease B OB domain SUTH_01072 PF00773 RNB domain SUTH_01072 PF00575 S1 RNA binding domain SUTH_01072 PF17876 Cold shock domain SUTH_01072 PF08461 Ribonuclease R winged-helix domain SUTH_01073 PF00471 Ribosomal protein L33 SUTH_01074 PF00830 Ribosomal L28 family SUTH_01075 PF04002 RadC-like JAB domain SUTH_01076 PF02441 Flavoprotein SUTH_01076 PF04127 DNA / pantothenate metabolism flavoprotein SUTH_01077 PF00692 dUTPase SUTH_01078 PF13442 Cytochrome C oxidase, cbb3-type, subunit III SUTH_01079 PF09242 Flavocytochrome c sulphide dehydrogenase, flavin-binding SUTH_01079 PF07992 Pyridine nucleotide-disulphide oxidoreductase SUTH_01079 PF10518 TAT (twin-arginine translocation) pathway signal sequence SUTH_01081 PF03264 NapC/NirT cytochrome c family, N-terminal region SUTH_01082 PF01274 Malate synthase SUTH_01083 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SUTH_01083 PF03466 LysR substrate binding domain SUTH_01084 PF12146 Serine aminopeptidase, S33 SUTH_01085 PF00463 Isocitrate lyase family SUTH_01086 PF03737 Aldolase/RraA SUTH_01087 PF07724 AAA domain (Cdc48 subfamily) SUTH_01087 PF00004 ATPase family associated with various cellular activities (AAA) SUTH_01087 PF10431 C-terminal, D2-small domain, of ClpB protein SUTH_01087 PF02861 Clp amino terminal domain, pathogenicity island component SUTH_01087 PF17871 AAA lid domain SUTH_01088 PF02617 ATP-dependent Clp protease adaptor protein ClpS SUTH_01089 PF00313 'Cold-shock' DNA-binding domain SUTH_01090 PF00180 Isocitrate/isopropylmalate dehydrogenase SUTH_01091 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) SUTH_01092 PF00849 RNA pseudouridylate synthase SUTH_01095 PF04102 SlyX SUTH_01096 PF02777 Iron/manganese superoxide dismutases, C-terminal domain SUTH_01096 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain SUTH_01097 PF13742 OB-fold nucleic acid binding domain SUTH_01097 PF02601 Exonuclease VII, large subunit SUTH_01100 PF01618 MotA/TolQ/ExbB proton channel family SUTH_01101 PF02472 Biopolymer transport protein ExbD/TolR SUTH_01102 PF02606 Tetraacyldisaccharide-1-P 4'-kinase SUTH_01103 PF03966 Trm112p-like protein SUTH_01104 PF02348 Cytidylyltransferase SUTH_01105 PF05191 Adenylate kinase, active site lid SUTH_01106 PF00365 Phosphofructokinase SUTH_01107 PF00365 Phosphofructokinase SUTH_01108 PF03030 Inorganic H+ pyrophosphatase SUTH_01110 PF03023 Lipid II flippase MurJ SUTH_01112 PF13614 AAA domain SUTH_01113 PF00202 Aminotransferase class-III SUTH_01114 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain SUTH_01114 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain SUTH_01115 PF00764 Arginosuccinate synthase SUTH_01117 PF06865 Pyrimidine/purine nucleoside phosphorylase SUTH_01118 PF04461 Protein of unknown function (DUF520) SUTH_01119 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain SUTH_01119 PF00117 Glutamine amidotransferase class-I SUTH_01120 PF00293 NUDIX domain SUTH_01121 PF17113 Regulatory signalling modulator protein AmpE SUTH_01121 PF03186 CobD/Cbib protein SUTH_01122 PF02803 Thiolase, C-terminal domain SUTH_01122 PF00108 Thiolase, N-terminal domain SUTH_01123 PF00672 HAMP domain SUTH_01123 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SUTH_01123 PF02203 Tar ligand binding domain homologue SUTH_01124 PF01527 Transposase SUTH_01125 PF01740 STAS domain SUTH_01125 PF00916 Sulfate permease family SUTH_01126 PF13193 AMP-binding enzyme C-terminal domain SUTH_01126 PF00501 AMP-binding enzyme SUTH_01127 PF00441 Acyl-CoA dehydrogenase, C-terminal domain SUTH_01127 PF02770 Acyl-CoA dehydrogenase, middle domain SUTH_01127 PF02771 Acyl-CoA dehydrogenase, N-terminal domain SUTH_01129 PF16884 N-terminal domain of oxidoreductase SUTH_01129 PF00107 Zinc-binding dehydrogenase SUTH_01131 PF05598 Transposase domain (DUF772) SUTH_01131 PF01609 Transposase DDE domain SUTH_01133 PF00108 Thiolase, N-terminal domain SUTH_01133 PF02803 Thiolase, C-terminal domain SUTH_01134 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain SUTH_01134 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain SUTH_01134 PF00378 Enoyl-CoA hydratase/isomerase SUTH_01135 PF00005 ABC transporter SUTH_01136 PF00005 ABC transporter SUTH_01136 PF12399 Branched-chain amino acid ATP-binding cassette transporter SUTH_01138 PF02653 Branched-chain amino acid transport system / permease component SUTH_01139 PF13458 Periplasmic binding protein SUTH_01141 PF00781 Diacylglycerol kinase catalytic domain SUTH_01144 PF01926 50S ribosome-binding GTPase SUTH_01147 PF00175 Oxidoreductase NAD-binding domain SUTH_01147 PF00111 2Fe-2S iron-sulfur cluster binding domain SUTH_01147 PF00970 Oxidoreductase FAD-binding domain SUTH_01150 PF09086 Domain of unknown function (DUF1924) SUTH_01152 PF00486 Transcriptional regulatory protein, C terminal SUTH_01152 PF00072 Response regulator receiver domain SUTH_01153 PF08918 PhoQ Sensor SUTH_01153 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SUTH_01154 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 SUTH_01156 PF02423 Ornithine cyclodeaminase/mu-crystallin family SUTH_01158 PF02630 SCO1/SenC SUTH_01160 PF16701 Adenylate cyclase regulatory domain SUTH_01160 PF00211 Adenylate and Guanylate cyclase catalytic domain SUTH_01163 PF00005 ABC transporter SUTH_01163 PF08352 Oligopeptide/dipeptide transporter, C-terminal region SUTH_01164 PF12911 N-terminal TM domain of oligopeptide transport permease C SUTH_01164 PF00528 Binding-protein-dependent transport system inner membrane component SUTH_01165 PF00528 Binding-protein-dependent transport system inner membrane component SUTH_01166 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle SUTH_01167 PF01476 LysM domain SUTH_01167 PF01464 Transglycosylase SLT domain SUTH_01169 PF16123 Hydroxyacylglutathione hydrolase C-terminus SUTH_01169 PF00753 Metallo-beta-lactamase superfamily SUTH_01170 PF08241 Methyltransferase domain SUTH_01171 PF00075 RNase H SUTH_01172 PF00929 Exonuclease SUTH_01175 PF00171 Aldehyde dehydrogenase family SUTH_01176 PF08990 Erythronolide synthase docking SUTH_01176 PF14765 Polyketide synthase dehydratase SUTH_01176 PF00698 Acyl transferase domain SUTH_01176 PF00550 Phosphopantetheine attachment site SUTH_01176 PF08659 KR domain SUTH_01176 PF09277 Erythronolide synthase, docking SUTH_01176 PF02801 Beta-ketoacyl synthase, C-terminal domain SUTH_01176 PF16197 Ketoacyl-synthetase C-terminal extension SUTH_01176 PF00109 Beta-ketoacyl synthase, N-terminal domain SUTH_01176 PF08240 Alcohol dehydrogenase GroES-like domain SUTH_01177 PF00106 short chain dehydrogenase SUTH_01178 PF00440 Bacterial regulatory proteins, tetR family SUTH_01178 PF08361 MAATS-type transcriptional repressor, C-terminal region SUTH_01179 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain SUTH_01179 PF06974 Protein of unknown function (DUF1298) SUTH_01181 PF06974 Protein of unknown function (DUF1298) SUTH_01181 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain SUTH_01182 PF00561 alpha/beta hydrolase fold SUTH_01183 PF05139 Erythromycin esterase SUTH_01183 PF00156 Phosphoribosyl transferase domain SUTH_01184 PF01207 Dihydrouridine synthase (Dus) SUTH_01185 PF12392 Collagenase SUTH_01185 PF01136 Peptidase family U32 SUTH_01186 PF01627 Hpt domain SUTH_01186 PF00989 PAS fold SUTH_01186 PF00497 Bacterial extracellular solute-binding proteins, family 3 SUTH_01186 PF00072 Response regulator receiver domain SUTH_01186 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SUTH_01186 PF00512 His Kinase A (phospho-acceptor) domain SUTH_01192 PF00892 EamA-like transporter family SUTH_01194 PF12848 ABC transporter SUTH_01194 PF00005 ABC transporter SUTH_01198 PF02817 e3 binding domain SUTH_01198 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) SUTH_01198 PF00364 Biotin-requiring enzyme SUTH_01204 PF02347 Glycine cleavage system P-protein SUTH_01205 PF01597 Glycine cleavage H-protein SUTH_01206 PF01571 Aminomethyltransferase folate-binding domain SUTH_01206 PF08669 Glycine cleavage T-protein C-terminal barrel domain SUTH_01208 PF00563 EAL domain SUTH_01208 PF00990 Diguanylate cyclase, GGDEF domain SUTH_01208 PF03707 Bacterial signalling protein N terminal repeat SUTH_01209 PF01726 LexA DNA binding domain SUTH_01209 PF00717 Peptidase S24-like SUTH_01210 PF00797 N-acetyltransferase SUTH_01214 PF00072 Response regulator receiver domain SUTH_01214 PF00990 Diguanylate cyclase, GGDEF domain SUTH_01215 PF00072 Response regulator receiver domain SUTH_01218 PF08281 Sigma-70, region 4 SUTH_01218 PF04542 Sigma-70 region 2 SUTH_01219 PF07681 DoxX SUTH_01221 PF05114 Protein of unknown function (DUF692) SUTH_01224 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component SUTH_01228 PF00005 ABC transporter SUTH_01228 PF12399 Branched-chain amino acid ATP-binding cassette transporter SUTH_01229 PF00005 ABC transporter SUTH_01231 PF00501 AMP-binding enzyme SUTH_01231 PF13193 AMP-binding enzyme C-terminal domain SUTH_01232 PF00378 Enoyl-CoA hydratase/isomerase SUTH_01234 PF00441 Acyl-CoA dehydrogenase, C-terminal domain SUTH_01234 PF12806 Acetyl-CoA dehydrogenase C-terminal like SUTH_01234 PF02771 Acyl-CoA dehydrogenase, N-terminal domain SUTH_01234 PF02770 Acyl-CoA dehydrogenase, middle domain SUTH_01235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SUTH_01235 PF03466 LysR substrate binding domain SUTH_01237 PF04909 Amidohydrolase SUTH_01238 PF03737 Aldolase/RraA SUTH_01240 PF04909 Amidohydrolase SUTH_01241 PF07746 Aromatic-ring-opening dioxygenase LigAB, LigA subunit SUTH_01242 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase SUTH_01243 PF01408 Oxidoreductase family, NAD-binding Rossmann fold SUTH_01244 PF00248 Aldo/keto reductase family SUTH_01246 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase SUTH_01247 PF01494 FAD binding domain SUTH_01249 PF01850 PIN domain SUTH_01252 PF05598 Transposase domain (DUF772) SUTH_01252 PF01609 Transposase DDE domain SUTH_01257 PF00196 Bacterial regulatory proteins, luxR family SUTH_01257 PF00072 Response regulator receiver domain SUTH_01259 PF00990 Diguanylate cyclase, GGDEF domain SUTH_01259 PF00072 Response regulator receiver domain SUTH_01263 PF04324 BFD-like [2Fe-2S] binding domain SUTH_01263 PF01266 FAD dependent oxidoreductase SUTH_01264 PF00890 FAD binding domain SUTH_01266 PF00528 Binding-protein-dependent transport system inner membrane component SUTH_01267 PF00528 Binding-protein-dependent transport system inner membrane component SUTH_01268 PF13416 Bacterial extracellular solute-binding protein SUTH_01269 PF03949 Malic enzyme, NAD binding domain SUTH_01269 PF00390 Malic enzyme, N-terminal domain SUTH_01275 PF00892 EamA-like transporter family SUTH_01278 PF06296 RelE toxin of RelE / RelB toxin-antitoxin system SUTH_01283 PF03193 RsgA GTPase SUTH_01284 PF01329 Pterin 4 alpha carbinolamine dehydratase SUTH_01285 PF01435 Peptidase family M48 SUTH_01285 PF16491 CAAX prenyl protease N-terminal, five membrane helices SUTH_01286 PF00929 Exonuclease SUTH_01288 PF01197 Ribosomal protein L31 SUTH_01289 PF07498 Rho termination factor, N-terminal domain SUTH_01289 PF07497 Rho termination factor, RNA-binding domain SUTH_01289 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain SUTH_01290 PF00085 Thioredoxin SUTH_01291 PF11953 Domain of unknown function (DUF3470) SUTH_01291 PF00037 4Fe-4S binding domain SUTH_01292 PF01264 Chorismate synthase SUTH_01294 PF12832 MFS_1 like family SUTH_01295 PF00330 Aconitase family (aconitate hydratase) SUTH_01297 PF00694 Aconitase C-terminal domain SUTH_01298 PF00180 Isocitrate/isopropylmalate dehydrogenase SUTH_01299 PF01118 Semialdehyde dehydrogenase, NAD binding domain SUTH_01299 PF02774 Semialdehyde dehydrogenase, dimerisation domain SUTH_01302 PF01416 tRNA pseudouridine synthase SUTH_01303 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase SUTH_01304 PF00291 Pyridoxal-phosphate dependent enzyme SUTH_01305 PF00290 Tryptophan synthase alpha chain SUTH_01306 PF01039 Carboxyl transferase domain SUTH_01306 PF17848 Acetyl-coA carboxylase zinc finger domain SUTH_01307 PF08245 Mur ligase middle domain SUTH_01307 PF02875 Mur ligase family, glutamate ligase domain SUTH_01309 PF02674 Colicin V production protein SUTH_01310 PF00156 Phosphoribosyl transferase domain SUTH_01311 PF01053 Cys/Met metabolism PLP-dependent enzyme SUTH_01312 PF00149 Calcineurin-like phosphoesterase SUTH_01313 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD SUTH_01314 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD SUTH_01317 PF01406 tRNA synthetases class I (C) catalytic domain SUTH_01317 PF09190 DALR domain SUTH_01319 PF09827 CRISPR associated protein Cas2 SUTH_01320 PF01867 CRISPR associated protein Cas1 SUTH_01321 PF13395 HNH endonuclease SUTH_01321 PF18541 RuvC endonuclease subdomain 3 SUTH_01324 PF01556 DnaJ C terminal domain SUTH_01324 PF00226 DnaJ domain SUTH_01324 PF00684 DnaJ central domain SUTH_01325 PF00012 Hsp70 protein SUTH_01326 PF01025 GrpE SUTH_01327 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SUTH_01327 PF00672 HAMP domain SUTH_01327 PF12729 Four helix bundle sensory module for signal transduction SUTH_01328 PF03707 Bacterial signalling protein N terminal repeat SUTH_01328 PF00990 Diguanylate cyclase, GGDEF domain SUTH_01328 PF00563 EAL domain SUTH_01330 PF00085 Thioredoxin SUTH_01331 PF00762 Ferrochelatase SUTH_01332 PF01628 HrcA protein C terminal domain SUTH_01332 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding SUTH_01333 PF01513 ATP-NAD kinase SUTH_01334 PF02463 RecF/RecN/SMC N terminal domain SUTH_01335 PF01169 Uncharacterized protein family UPF0016 SUTH_01336 PF01475 Ferric uptake regulator family SUTH_01337 PF04355 SmpA / OmlA family SUTH_01338 PF01113 Dihydrodipicolinate reductase, N-terminus SUTH_01338 PF05173 Dihydrodipicolinate reductase, C-terminus SUTH_01339 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain SUTH_01339 PF00117 Glutamine amidotransferase class-I SUTH_01340 PF01810 LysE type translocator SUTH_01341 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain SUTH_01341 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain SUTH_01341 PF02142 MGS-like domain SUTH_01342 PF01272 Transcription elongation factor, GreA/GreB, C-term SUTH_01342 PF03449 Transcription elongation factor, N-terminal SUTH_01344 PF01985 CRS1 / YhbY (CRM) domain SUTH_01345 PF01728 FtsJ-like methyltransferase SUTH_01346 PF01434 Peptidase family M41 SUTH_01346 PF00004 ATPase family associated with various cellular activities (AAA) SUTH_01346 PF17862 AAA+ lid domain SUTH_01346 PF06480 FtsH Extracellular SUTH_01347 PF00809 Pterin binding enzyme SUTH_01348 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain SUTH_01348 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I SUTH_01348 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II SUTH_01348 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III SUTH_01349 PF13188 PAS domain SUTH_01349 PF00990 Diguanylate cyclase, GGDEF domain SUTH_01349 PF03707 Bacterial signalling protein N terminal repeat SUTH_01349 PF00563 EAL domain SUTH_01350 PF09345 Domain of unknown function (DUF1987) SUTH_01355 PF00149 Calcineurin-like phosphoesterase SUTH_01356 PF13439 Glycosyltransferase Family 4 SUTH_01356 PF00534 Glycosyl transferases group 1 SUTH_01357 PF01219 Prokaryotic diacylglycerol kinase SUTH_01358 PF00534 Glycosyl transferases group 1 SUTH_01358 PF13439 Glycosyltransferase Family 4 SUTH_01360 PF01553 Acyltransferase SUTH_01361 PF12849 PBP superfamily domain SUTH_01362 PF00528 Binding-protein-dependent transport system inner membrane component SUTH_01363 PF00528 Binding-protein-dependent transport system inner membrane component SUTH_01364 PF00005 ABC transporter SUTH_01365 PF03150 Di-haem cytochrome c peroxidase SUTH_01365 PF00034 Cytochrome c SUTH_01373 PF13183 4Fe-4S dicluster domain SUTH_01373 PF13085 2Fe-2S iron-sulfur cluster binding domain SUTH_01374 PF02910 Fumarate reductase flavoprotein C-term SUTH_01374 PF00890 FAD binding domain SUTH_01375 PF00121 Triosephosphate isomerase SUTH_01376 PF03840 Preprotein translocase SecG subunit SUTH_01378 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 SUTH_01379 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit SUTH_01381 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit SUTH_01383 PF10531 SLBB domain SUTH_01383 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit SUTH_01383 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region SUTH_01384 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal SUTH_01384 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region SUTH_01384 PF00384 Molybdopterin oxidoreductase SUTH_01385 PF00146 NADH dehydrogenase SUTH_01386 PF12838 4Fe-4S dicluster domain SUTH_01387 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 SUTH_01388 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L SUTH_01389 PF00361 Proton-conducting membrane transporter SUTH_01389 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus SUTH_01390 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus SUTH_01390 PF00361 Proton-conducting membrane transporter SUTH_01391 PF00361 Proton-conducting membrane transporter SUTH_01392 PF00293 NUDIX domain SUTH_01393 PF07730 Histidine kinase SUTH_01393 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SUTH_01393 PF00672 HAMP domain SUTH_01393 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term SUTH_01394 PF00196 Bacterial regulatory proteins, luxR family SUTH_01394 PF00072 Response regulator receiver domain SUTH_01396 PF00107 Zinc-binding dehydrogenase SUTH_01396 PF16197 Ketoacyl-synthetase C-terminal extension SUTH_01396 PF08240 Alcohol dehydrogenase GroES-like domain SUTH_01396 PF00698 Acyl transferase domain SUTH_01396 PF02801 Beta-ketoacyl synthase, C-terminal domain SUTH_01396 PF08659 KR domain SUTH_01396 PF00550 Phosphopantetheine attachment site SUTH_01396 PF14765 Polyketide synthase dehydratase SUTH_01396 PF00109 Beta-ketoacyl synthase, N-terminal domain SUTH_01397 PF00589 Phage integrase family SUTH_01397 PF13495 Phage integrase, N-terminal SAM-like domain SUTH_01403 PF05598 Transposase domain (DUF772) SUTH_01403 PF01609 Transposase DDE domain SUTH_01404 PF05015 RelE-like toxin of type II toxin-antitoxin system HigB SUTH_01405 PF01381 Helix-turn-helix SUTH_01406 PF05015 RelE-like toxin of type II toxin-antitoxin system HigB SUTH_01407 PF01381 Helix-turn-helix SUTH_01408 PF01266 FAD dependent oxidoreductase SUTH_01408 PF16901 C-terminal domain of alpha-glycerophosphate oxidase SUTH_01409 PF00501 AMP-binding enzyme SUTH_01409 PF13193 AMP-binding enzyme C-terminal domain SUTH_01412 PF01661 Macro domain SUTH_01415 PF12146 Serine aminopeptidase, S33 SUTH_01417 PF13187 4Fe-4S dicluster domain SUTH_01417 PF04060 Putative Fe-S cluster SUTH_01418 PF10371 Domain of unknown function SUTH_01418 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II SUTH_01418 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase SUTH_01418 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg SUTH_01418 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain SUTH_01419 PF13375 RnfC Barrel sandwich hybrid domain SUTH_01419 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit SUTH_01419 PF13237 4Fe-4S dicluster domain SUTH_01419 PF10531 SLBB domain SUTH_01420 PF03116 NQR2, RnfD, RnfE family SUTH_01422 PF02508 Rnf-Nqr subunit, membrane protein SUTH_01423 PF02508 Rnf-Nqr subunit, membrane protein SUTH_01425 PF01383 CpcD/allophycocyanin linker domain SUTH_01425 PF00970 Oxidoreductase FAD-binding domain SUTH_01425 PF00175 Oxidoreductase NAD-binding domain SUTH_01428 PF01262 Alanine dehydrogenase/PNT, C-terminal domain SUTH_01428 PF05222 Alanine dehydrogenase/PNT, N-terminal domain SUTH_01429 PF08668 HDOD domain SUTH_01429 PF00563 EAL domain SUTH_01430 PF10414 Sirohaem synthase dimerisation region SUTH_01430 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases SUTH_01430 PF14824 Sirohaem biosynthesis protein central SUTH_01432 PF07685 CobB/CobQ-like glutamine amidotransferase domain SUTH_01432 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain SUTH_01434 PF13247 4Fe-4S dicluster domain SUTH_01436 PF07992 Pyridine nucleotide-disulphide oxidoreductase SUTH_01436 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster SUTH_01436 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region SUTH_01439 PF04358 DsrC like protein SUTH_01440 PF04077 DsrH like protein SUTH_01441 PF02635 DsrE/DsrF-like family SUTH_01442 PF02635 DsrE/DsrF-like family SUTH_01443 PF01077 Nitrite and sulphite reductase 4Fe-4S domain SUTH_01443 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain SUTH_01444 PF01077 Nitrite and sulphite reductase 4Fe-4S domain SUTH_01444 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain SUTH_01447 PF01206 Sulfurtransferase TusA SUTH_01452 PF00753 Metallo-beta-lactamase superfamily SUTH_01453 PF07992 Pyridine nucleotide-disulphide oxidoreductase SUTH_01454 PF07848 PaaX-like protein SUTH_01454 PF08223 PaaX-like protein C-terminal domain SUTH_01458 PF01609 Transposase DDE domain SUTH_01458 PF05598 Transposase domain (DUF772) SUTH_01459 PF07722 Peptidase C26 SUTH_01460 PF04107 Glutamate-cysteine ligase family 2(GCS2) SUTH_01461 PF00999 Sodium/hydrogen exchanger family SUTH_01463 PF00990 Diguanylate cyclase, GGDEF domain SUTH_01463 PF17151 Periplasmic sensor domain SUTH_01465 PF00072 Response regulator receiver domain SUTH_01465 PF00158 Sigma-54 interaction domain SUTH_01467 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SUTH_01467 PF00512 His Kinase A (phospho-acceptor) domain SUTH_01478 PF08668 HDOD domain SUTH_01478 PF00563 EAL domain SUTH_01482 PF02771 Acyl-CoA dehydrogenase, N-terminal domain SUTH_01482 PF02770 Acyl-CoA dehydrogenase, middle domain SUTH_01482 PF12806 Acetyl-CoA dehydrogenase C-terminal like SUTH_01482 PF00441 Acyl-CoA dehydrogenase, C-terminal domain SUTH_01483 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain SUTH_01483 PF00378 Enoyl-CoA hydratase/isomerase SUTH_01483 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain SUTH_01484 PF02803 Thiolase, C-terminal domain SUTH_01484 PF00108 Thiolase, N-terminal domain SUTH_01485 PF00440 Bacterial regulatory proteins, tetR family SUTH_01485 PF08361 MAATS-type transcriptional repressor, C-terminal region SUTH_01486 PF01012 Electron transfer flavoprotein domain SUTH_01487 PF00766 Electron transfer flavoprotein FAD-binding domain SUTH_01487 PF01012 Electron transfer flavoprotein domain SUTH_01488 PF12806 Acetyl-CoA dehydrogenase C-terminal like SUTH_01488 PF02771 Acyl-CoA dehydrogenase, N-terminal domain SUTH_01488 PF02770 Acyl-CoA dehydrogenase, middle domain SUTH_01488 PF00441 Acyl-CoA dehydrogenase, C-terminal domain SUTH_01489 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SUTH_01489 PF08447 PAS fold SUTH_01489 PF13426 PAS domain SUTH_01492 PF00501 AMP-binding enzyme SUTH_01492 PF13193 AMP-binding enzyme C-terminal domain SUTH_01493 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ SUTH_01494 PF01479 S4 domain SUTH_01494 PF00849 RNA pseudouridylate synthase SUTH_01496 PF01250 Ribosomal protein S6 SUTH_01498 PF01084 Ribosomal protein S18 SUTH_01499 PF01281 Ribosomal protein L9, N-terminal domain SUTH_01499 PF03948 Ribosomal protein L9, C-terminal domain SUTH_01500 PF00772 DnaB-like helicase N terminal domain SUTH_01500 PF03796 DnaB-like helicase C terminal domain SUTH_01501 PF13638 PIN domain SUTH_01501 PF02562 PhoH-like protein SUTH_01502 PF00578 AhpC/TSA family SUTH_01503 PF01522 Polysaccharide deacetylase SUTH_01504 PF00551 Formyl transferase SUTH_01504 PF02911 Formyl transferase, C-terminal domain SUTH_01504 PF01370 NAD dependent epimerase/dehydratase family SUTH_01505 PF01370 NAD dependent epimerase/dehydratase family SUTH_01505 PF02911 Formyl transferase, C-terminal domain SUTH_01505 PF00551 Formyl transferase SUTH_01506 PF00535 Glycosyl transferase family 2 SUTH_01507 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family SUTH_01509 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase SUTH_01510 PF04430 Protein of unknown function (DUF498/DUF598) SUTH_01511 PF00155 Aminotransferase class I and II SUTH_01513 PF03447 Homoserine dehydrogenase, NAD binding domain SUTH_01513 PF01842 ACT domain SUTH_01513 PF00742 Homoserine dehydrogenase SUTH_01516 PF00291 Pyridoxal-phosphate dependent enzyme SUTH_01516 PF14821 Threonine synthase N terminus SUTH_01518 PF00521 DNA gyrase/topoisomerase IV, subunit A SUTH_01519 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SUTH_01519 PF01751 Toprim domain SUTH_01519 PF00204 DNA gyrase B SUTH_01519 PF00986 DNA gyrase B subunit, carboxyl terminus SUTH_01520 PF04321 RmlD substrate binding domain SUTH_01521 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase SUTH_01522 PF00483 Nucleotidyl transferase SUTH_01523 PF16363 GDP-mannose 4,6 dehydratase SUTH_01524 PF01494 FAD binding domain SUTH_01525 PF00378 Enoyl-CoA hydratase/isomerase SUTH_01526 PF02771 Acyl-CoA dehydrogenase, N-terminal domain SUTH_01526 PF00441 Acyl-CoA dehydrogenase, C-terminal domain SUTH_01526 PF02770 Acyl-CoA dehydrogenase, middle domain SUTH_01527 PF01042 Endoribonuclease L-PSP SUTH_01529 PF02811 PHP domain SUTH_01530 PF01300 Telomere recombination SUTH_01531 PF02163 Peptidase family M50 SUTH_01532 PF00579 tRNA synthetases class I (W and Y) SUTH_01533 PF02616 Segregation and condensation protein ScpA SUTH_01534 PF04079 Segregation and condensation complex subunit ScpB SUTH_01535 PF00849 RNA pseudouridylate synthase SUTH_01535 PF01479 S4 domain SUTH_01536 PF02576 RimP N-terminal domain SUTH_01536 PF17384 RimP C-terminal SH3 domain SUTH_01537 PF13184 NusA-like KH domain SUTH_01537 PF08529 NusA N-terminal domain SUTH_01537 PF00575 S1 RNA binding domain SUTH_01538 PF08364 Bacterial translation initiation factor IF-2 associated region SUTH_01538 PF04760 Translation initiation factor IF-2, N-terminal region SUTH_01538 PF11987 Translation-initiation factor 2 SUTH_01538 PF00009 Elongation factor Tu GTP binding domain SUTH_01539 PF02033 Ribosome-binding factor A SUTH_01540 PF16198 tRNA pseudouridylate synthase B C-terminal domain SUTH_01540 PF01509 TruB family pseudouridylate synthase (N terminal domain) SUTH_01540 PF09157 Pseudouridine synthase II TruB, C-terminal SUTH_01541 PF00312 Ribosomal protein S15 SUTH_01542 PF00013 KH domain SUTH_01542 PF00575 S1 RNA binding domain SUTH_01542 PF01138 3' exoribonuclease family, domain 1 SUTH_01542 PF03725 3' exoribonuclease family, domain 2 SUTH_01542 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain SUTH_01543 PF01258 Prokaryotic dksA/traR C4-type zinc finger SUTH_01545 PF01844 HNH endonuclease SUTH_01551 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain SUTH_01551 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain SUTH_01552 PF01645 Conserved region in glutamate synthase SUTH_01554 PF03853 YjeF-related protein N-terminus SUTH_01554 PF01256 Carbohydrate kinase SUTH_01555 PF00291 Pyridoxal-phosphate dependent enzyme SUTH_01556 PF11798 IMS family HHH motif SUTH_01556 PF00817 impB/mucB/samB family SUTH_01556 PF11799 impB/mucB/samB family C-terminal domain SUTH_01557 PF07687 Peptidase dimerisation domain SUTH_01557 PF01546 Peptidase family M20/M25/M40 SUTH_01559 PF03741 Integral membrane protein TerC family SUTH_01560 PF01569 PAP2 superfamily SUTH_01562 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SUTH_01562 PF03466 LysR substrate binding domain SUTH_01566 PF08207 Elongation factor P (EF-P) KOW-like domain SUTH_01566 PF09285 Elongation factor P, C-terminal SUTH_01566 PF01132 Elongation factor P (EF-P) OB domain SUTH_01568 PF03167 Uracil DNA glycosylase superfamily SUTH_01569 PF08459 UvrC Helix-hairpin-helix N-terminal SUTH_01569 PF02151 UvrB/uvrC motif SUTH_01569 PF01541 GIY-YIG catalytic domain SUTH_01570 PF01066 CDP-alcohol phosphatidyltransferase SUTH_01574 PF00589 Phage integrase family SUTH_01574 PF13356 Arm DNA-binding domain SUTH_01578 PF01381 Helix-turn-helix SUTH_01582 PF05930 Prophage CP4-57 regulatory protein (AlpA) SUTH_01584 PF03354 Phage Terminase SUTH_01585 PF03796 DnaB-like helicase C terminal domain SUTH_01585 PF00772 DnaB-like helicase N terminal domain SUTH_01598 PF05188 MutS domain II SUTH_01598 PF01624 MutS domain I SUTH_01598 PF00488 MutS domain V SUTH_01598 PF05190 MutS family domain IV SUTH_01598 PF05192 MutS domain III SUTH_01599 PF00459 Inositol monophosphatase family SUTH_01600 PF00588 SpoU rRNA Methylase family SUTH_01601 PF06426 Serine acetyltransferase, N-terminal SUTH_01601 PF00132 Bacterial transferase hexapeptide (six repeats) SUTH_01602 PF02082 Transcriptional regulator SUTH_01603 PF00266 Aminotransferase class-V SUTH_01604 PF00266 Aminotransferase class-V SUTH_01605 PF01592 NifU-like N terminal domain SUTH_01606 PF01521 Iron-sulphur cluster biosynthesis SUTH_01607 PF00226 DnaJ domain SUTH_01607 PF07743 HSCB C-terminal oligomerisation domain SUTH_01608 PF00012 Hsp70 protein SUTH_01609 PF00111 2Fe-2S iron-sulfur cluster binding domain SUTH_01610 PF04384 Iron-sulphur cluster assembly SUTH_01611 PF01026 TatD related DNase SUTH_01612 PF08534 Redoxin SUTH_01614 PF01048 Phosphorylase superfamily SUTH_01615 PF01327 Polypeptide deformylase SUTH_01617 PF00990 Diguanylate cyclase, GGDEF domain SUTH_01617 PF17151 Periplasmic sensor domain SUTH_01621 PF02634 FdhD/NarQ family SUTH_01622 PF00384 Molybdopterin oxidoreductase SUTH_01622 PF04879 Molybdopterin oxidoreductase Fe4S4 domain SUTH_01622 PF01568 Molydopterin dinucleotide binding domain SUTH_01623 PF13247 4Fe-4S dicluster domain SUTH_01631 PF03480 Bacterial extracellular solute-binding protein, family 7 SUTH_01633 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component SUTH_01635 PF00698 Acyl transferase domain SUTH_01635 PF08240 Alcohol dehydrogenase GroES-like domain SUTH_01635 PF08990 Erythronolide synthase docking SUTH_01635 PF02801 Beta-ketoacyl synthase, C-terminal domain SUTH_01635 PF16197 Ketoacyl-synthetase C-terminal extension SUTH_01635 PF09277 Erythronolide synthase, docking SUTH_01635 PF00550 Phosphopantetheine attachment site SUTH_01635 PF14765 Polyketide synthase dehydratase SUTH_01635 PF00109 Beta-ketoacyl synthase, N-terminal domain SUTH_01635 PF08659 KR domain SUTH_01637 PF09907 HigB_toxin, RelE-like toxic component of a toxin-antitoxin system SUTH_01644 PF01202 Shikimate kinase SUTH_01645 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component SUTH_01646 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component SUTH_01647 PF01869 BadF/BadG/BcrA/BcrD ATPase family SUTH_01648 PF01869 BadF/BadG/BcrA/BcrD ATPase family SUTH_01653 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster SUTH_01653 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region SUTH_01653 PF07992 Pyridine nucleotide-disulphide oxidoreductase SUTH_01654 PF00378 Enoyl-CoA hydratase/isomerase SUTH_01655 PF00107 Zinc-binding dehydrogenase SUTH_01655 PF08240 Alcohol dehydrogenase GroES-like domain SUTH_01656 PF00378 Enoyl-CoA hydratase/isomerase SUTH_01658 PF00441 Acyl-CoA dehydrogenase, C-terminal domain SUTH_01658 PF02771 Acyl-CoA dehydrogenase, N-terminal domain SUTH_01658 PF02770 Acyl-CoA dehydrogenase, middle domain SUTH_01659 PF13193 AMP-binding enzyme C-terminal domain SUTH_01659 PF00501 AMP-binding enzyme SUTH_01661 PF02653 Branched-chain amino acid transport system / permease component SUTH_01663 PF12399 Branched-chain amino acid ATP-binding cassette transporter SUTH_01663 PF00005 ABC transporter SUTH_01664 PF00005 ABC transporter SUTH_01667 PF07311 Dodecin SUTH_01670 PF14535 AMP-binding enzyme C-terminal domain SUTH_01670 PF00501 AMP-binding enzyme SUTH_01671 PF02441 Flavoprotein SUTH_01680 PF00111 2Fe-2S iron-sulfur cluster binding domain SUTH_01681 PF05175 Methyltransferase small domain SUTH_01682 PF01546 Peptidase family M20/M25/M40 SUTH_01682 PF07687 Peptidase dimerisation domain SUTH_01683 PF00437 Type II/IV secretion system protein SUTH_01684 PF14602 Hexapeptide repeat of succinyl-transferase SUTH_01684 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal SUTH_01684 PF00132 Bacterial transferase hexapeptide (six repeats) SUTH_01685 PF00155 Aminotransferase class I and II SUTH_01686 PF01738 Dienelactone hydrolase family SUTH_01689 PF07152 YaeQ protein SUTH_01690 PF00491 Arginase family SUTH_01699 PF02384 N-6 DNA Methylase SUTH_01701 PF03831 PhnA domain SUTH_01701 PF08274 PhnA Zinc-Ribbon SUTH_01706 PF00155 Aminotransferase class I and II SUTH_01707 PF00271 Helicase conserved C-terminal domain SUTH_01707 PF04851 Type III restriction enzyme, res subunit SUTH_01707 PF02151 UvrB/uvrC motif SUTH_01707 PF12344 Ultra-violet resistance protein B SUTH_01707 PF17757 UvrB interaction domain SUTH_01708 PF01451 Low molecular weight phosphotyrosine protein phosphatase SUTH_01709 PF10150 Ribonuclease E/G family SUTH_01709 PF12111 Polyribonucleotide phosphorylase C terminal SUTH_01709 PF00575 S1 RNA binding domain SUTH_01710 PF01479 S4 domain SUTH_01710 PF00849 RNA pseudouridylate synthase SUTH_01711 PF13419 Haloacid dehalogenase-like hydrolase SUTH_01713 PF01343 Peptidase family S49 SUTH_01713 PF06965 Na+/H+ antiporter 1 SUTH_01714 PF13089 Polyphosphate kinase N-terminal domain SUTH_01714 PF13090 Polyphosphate kinase C-terminal domain 2 SUTH_01714 PF17941 Polyphosphate kinase C-terminal domain 1 SUTH_01714 PF02503 Polyphosphate kinase middle domain SUTH_01715 PF02541 Ppx/GppA phosphatase family SUTH_01716 PF02405 Permease MlaE SUTH_01717 PF00005 ABC transporter SUTH_01720 PF00501 AMP-binding enzyme SUTH_01720 PF13193 AMP-binding enzyme C-terminal domain SUTH_01721 PF01804 Penicillin amidase SUTH_01722 PF00378 Enoyl-CoA hydratase/isomerase SUTH_01723 PF00501 AMP-binding enzyme SUTH_01724 PF11700 Vacuole effluxer Atg22 like SUTH_01726 PF12399 Branched-chain amino acid ATP-binding cassette transporter SUTH_01726 PF00005 ABC transporter SUTH_01727 PF00005 ABC transporter SUTH_01729 PF02653 Branched-chain amino acid transport system / permease component SUTH_01731 PF02600 Disulfide bond formation protein DsbB SUTH_01732 PF13462 Thioredoxin SUTH_01733 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SUTH_01733 PF03466 LysR substrate binding domain SUTH_01734 PF03328 HpcH/HpaI aldolase/citrate lyase family SUTH_01735 PF11849 Domain of unknown function (DUF3369) SUTH_01736 PF00171 Aldehyde dehydrogenase family SUTH_01738 PF14489 QueF-like protein SUTH_01739 PF02463 RecF/RecN/SMC N terminal domain SUTH_01741 PF01653 NAD-dependent DNA ligase adenylation domain SUTH_01741 PF03120 NAD-dependent DNA ligase OB-fold domain SUTH_01741 PF03119 NAD-dependent DNA ligase C4 zinc finger domain SUTH_01741 PF12826 Helix-hairpin-helix motif SUTH_01741 PF00533 BRCA1 C Terminus (BRCT) domain SUTH_01742 PF00483 Nucleotidyl transferase SUTH_01744 PF00216 Bacterial DNA-binding protein SUTH_01745 PF03707 Bacterial signalling protein N terminal repeat SUTH_01745 PF00990 Diguanylate cyclase, GGDEF domain SUTH_01745 PF00563 EAL domain SUTH_01748 PF00793 DAHP synthetase I family SUTH_01749 PF00990 Diguanylate cyclase, GGDEF domain SUTH_01749 PF08448 PAS fold SUTH_01750 PF17757 UvrB interaction domain SUTH_01750 PF03461 TRCF domain SUTH_01750 PF02559 CarD-like/TRCF domain SUTH_01750 PF00271 Helicase conserved C-terminal domain SUTH_01750 PF00270 DEAD/DEAH box helicase SUTH_01752 PF02790 Cytochrome C oxidase subunit II, transmembrane domain SUTH_01752 PF00116 Cytochrome C oxidase subunit II, periplasmic domain SUTH_01753 PF00115 Cytochrome C and Quinol oxidase polypeptide I SUTH_01754 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 SUTH_01755 PF00510 Cytochrome c oxidase subunit III SUTH_01758 PF01544 CorA-like Mg2+ transporter protein SUTH_01759 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) SUTH_01759 PF00512 His Kinase A (phospho-acceptor) domain SUTH_01759 PF01627 Hpt domain SUTH_01759 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SUTH_01759 PF00672 HAMP domain SUTH_01759 PF00072 Response regulator receiver domain SUTH_01761 PF02702 Osmosensitive K+ channel His kinase sensor domain SUTH_01761 PF13492 GAF domain SUTH_01761 PF13493 Domain of unknown function (DUF4118) SUTH_01761 PF00512 His Kinase A (phospho-acceptor) domain SUTH_01761 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SUTH_01762 PF00072 Response regulator receiver domain SUTH_01762 PF00486 Transcriptional regulatory protein, C terminal SUTH_01763 PF02705 K+ potassium transporter SUTH_01767 PF00999 Sodium/hydrogen exchanger family SUTH_01768 PF00999 Sodium/hydrogen exchanger family SUTH_01768 PF02080 TrkA-C domain SUTH_01768 PF02254 TrkA-N domain SUTH_01771 PF01875 Memo-like protein SUTH_01774 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase SUTH_01775 PF02542 YgbB family SUTH_01779 PF01609 Transposase DDE domain SUTH_01779 PF05598 Transposase domain (DUF772) SUTH_01781 PF00512 His Kinase A (phospho-acceptor) domain SUTH_01781 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SUTH_01781 PF00672 HAMP domain SUTH_01782 PF00486 Transcriptional regulatory protein, C terminal SUTH_01782 PF00072 Response regulator receiver domain SUTH_01787 PF00011 Hsp20/alpha crystallin family SUTH_01789 PF00196 Bacterial regulatory proteins, luxR family SUTH_01789 PF00072 Response regulator receiver domain SUTH_01790 PF00990 Diguanylate cyclase, GGDEF domain SUTH_01790 PF03707 Bacterial signalling protein N terminal repeat SUTH_01790 PF00563 EAL domain SUTH_01794 PF04542 Sigma-70 region 2 SUTH_01794 PF08281 Sigma-70, region 4 SUTH_01796 PF06434 Aconitate hydratase 2 N-terminus SUTH_01796 PF11791 Aconitate B N-terminal domain SUTH_01796 PF00330 Aconitase family (aconitate hydratase) SUTH_01798 PF00056 lactate/malate dehydrogenase, NAD binding domain SUTH_01798 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain SUTH_01799 PF07702 UTRA domain SUTH_01799 PF00392 Bacterial regulatory proteins, gntR family SUTH_01801 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit SUTH_01802 PF02910 Fumarate reductase flavoprotein C-term SUTH_01802 PF00890 FAD binding domain SUTH_01803 PF13085 2Fe-2S iron-sulfur cluster binding domain SUTH_01804 PF03937 Flavinator of succinate dehydrogenase SUTH_01805 PF00285 Citrate synthase, C-terminal domain SUTH_01806 PF00676 Dehydrogenase E1 component SUTH_01806 PF02779 Transketolase, pyrimidine binding domain SUTH_01806 PF16078 2-oxoglutarate dehydrogenase N-terminus SUTH_01806 PF16870 2-oxoglutarate dehydrogenase C-terminal SUTH_01807 PF00364 Biotin-requiring enzyme SUTH_01807 PF02817 e3 binding domain SUTH_01807 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) SUTH_01808 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain SUTH_01808 PF07992 Pyridine nucleotide-disulphide oxidoreductase SUTH_01809 PF03969 AFG1-like ATPase SUTH_01810 PF00578 AhpC/TSA family SUTH_01811 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase SUTH_01813 PF00027 Cyclic nucleotide-binding domain SUTH_01813 PF13545 Crp-like helix-turn-helix domain SUTH_01814 PF00664 ABC transporter transmembrane region SUTH_01814 PF03412 Peptidase C39 family SUTH_01814 PF00005 ABC transporter SUTH_01822 PF00005 ABC transporter SUTH_01822 PF00664 ABC transporter transmembrane region SUTH_01823 PF01526 Tn3 transposase DDE domain SUTH_01823 PF13700 Domain of unknown function (DUF4158) SUTH_01824 PF00512 His Kinase A (phospho-acceptor) domain SUTH_01824 PF16736 Single Cache-like SUTH_01824 PF00989 PAS fold SUTH_01824 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SUTH_01827 PF00486 Transcriptional regulatory protein, C terminal SUTH_01827 PF00072 Response regulator receiver domain SUTH_01830 PF00072 Response regulator receiver domain SUTH_01830 PF00486 Transcriptional regulatory protein, C terminal SUTH_01831 PF00989 PAS fold SUTH_01831 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SUTH_01831 PF00512 His Kinase A (phospho-acceptor) domain SUTH_01831 PF16736 Single Cache-like SUTH_01833 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SUTH_01833 PF00989 PAS fold SUTH_01833 PF00512 His Kinase A (phospho-acceptor) domain SUTH_01834 PF16736 Single Cache-like SUTH_01834 PF00512 His Kinase A (phospho-acceptor) domain SUTH_01834 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SUTH_01834 PF00989 PAS fold SUTH_01835 PF00072 Response regulator receiver domain SUTH_01835 PF00486 Transcriptional regulatory protein, C terminal SUTH_01836 PF13188 PAS domain SUTH_01836 PF03707 Bacterial signalling protein N terminal repeat SUTH_01836 PF00990 Diguanylate cyclase, GGDEF domain SUTH_01836 PF00563 EAL domain SUTH_01837 PF00486 Transcriptional regulatory protein, C terminal SUTH_01837 PF00072 Response regulator receiver domain SUTH_01839 PF00072 Response regulator receiver domain SUTH_01847 PF00005 ABC transporter SUTH_01847 PF00664 ABC transporter transmembrane region SUTH_01849 PF01026 TatD related DNase SUTH_01850 PF09115 DNA polymerase III, delta subunit, C terminal SUTH_01851 PF02223 Thymidylate kinase SUTH_01852 PF02618 YceG-like family SUTH_01855 PF13673 Acetyltransferase (GNAT) domain SUTH_01856 PF14437 MafB19-like deaminase SUTH_01857 PF00391 PEP-utilising enzyme, mobile domain SUTH_01857 PF02896 PEP-utilising enzyme, TIM barrel domain SUTH_01857 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain SUTH_01859 PF00929 Exonuclease SUTH_01862 PF13657 HipA N-terminal domain SUTH_01862 PF07804 HipA-like C-terminal domain SUTH_01864 PF00216 Bacterial DNA-binding protein SUTH_01866 PF06986 Type-1V conjugative transfer system mating pair stabilisation SUTH_01871 PF06834 TraU protein SUTH_01873 PF02586 SOS response associated peptidase (SRAP) SUTH_01876 PF08275 DNA primase catalytic core, N-terminal domain SUTH_01876 PF13662 Toprim domain SUTH_01876 PF08278 DNA primase DnaG DnaB-binding SUTH_01876 PF10410 DnaB-helicase binding domain of primase SUTH_01876 PF01807 CHC2 zinc finger SUTH_01879 PF07728 AAA domain (dynein-related subfamily) SUTH_01879 PF12102 Domain of unknown function (DUF3578) SUTH_01887 PF01661 Macro domain SUTH_01888 PF02146 Sir2 family SUTH_01897 PF06122 Conjugative relaxosome accessory transposon protein SUTH_01898 PF13728 F plasmid transfer operon protein SUTH_01902 PF10411 Disulfide bond isomerase protein N-terminus SUTH_01902 PF13098 Thioredoxin-like domain SUTH_01908 PF05736 OprF membrane domain SUTH_01908 PF00691 OmpA family SUTH_01909 PF01464 Transglycosylase SLT domain SUTH_01912 PF13361 UvrD-like helicase C-terminal domain SUTH_01912 PF00580 UvrD/REP helicase N-terminal domain SUTH_01917 PF12462 DNA helicase IV / RNA helicase N terminal SUTH_01917 PF00580 UvrD/REP helicase N-terminal domain SUTH_01917 PF13361 UvrD-like helicase C-terminal domain SUTH_01921 PF01726 LexA DNA binding domain SUTH_01921 PF00717 Peptidase S24-like SUTH_01922 PF00717 Peptidase S24-like SUTH_01923 PF13438 Domain of unknown function (DUF4113) SUTH_01923 PF00817 impB/mucB/samB family SUTH_01923 PF11799 impB/mucB/samB family C-terminal domain SUTH_01937 PF11867 Domain of unknown function (DUF3387) SUTH_01937 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) SUTH_01937 PF18766 SWI2/SNF2 ATPase SUTH_01939 PF01420 Type I restriction modification DNA specificity domain SUTH_01940 PF02384 N-6 DNA Methylase SUTH_01942 PF04002 RadC-like JAB domain SUTH_01955 PF02195 ParB-like nuclease domain SUTH_01955 PF17762 HTH domain found in ParB protein SUTH_01958 PF03837 RecT family SUTH_01962 PF00436 Single-strand binding protein family SUTH_01966 PF01479 S4 domain SUTH_01969 PF00589 Phage integrase family SUTH_01969 PF13356 Arm DNA-binding domain SUTH_01970 PF00958 GMP synthase C terminal domain SUTH_01970 PF00117 Glutamine amidotransferase class-I SUTH_01970 PF02540 NAD synthase SUTH_01971 PF00571 CBS domain SUTH_01971 PF00478 IMP dehydrogenase / GMP reductase domain SUTH_01972 PF03658 RnfH family Ubiquitin SUTH_01973 PF03364 Polyketide cyclase / dehydrase and lipid transport SUTH_01974 PF01668 SmpB protein SUTH_01975 PF07690 Major Facilitator Superfamily SUTH_01978 PF09382 RQC domain SUTH_01978 PF16124 RecQ zinc-binding SUTH_01978 PF00570 HRDC domain SUTH_01978 PF00270 DEAD/DEAH box helicase SUTH_01978 PF00271 Helicase conserved C-terminal domain SUTH_01979 PF03060 Nitronate monooxygenase SUTH_01980 PF00291 Pyridoxal-phosphate dependent enzyme SUTH_01981 PF01370 NAD dependent epimerase/dehydratase family SUTH_01982 PF00294 pfkB family carbohydrate kinase SUTH_01983 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain SUTH_01983 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain SUTH_01983 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain SUTH_01984 PF18073 Rubredoxin metal binding domain SUTH_01986 PF00216 Bacterial DNA-binding protein SUTH_01987 PF00575 S1 RNA binding domain SUTH_01988 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) SUTH_01989 PF01842 ACT domain SUTH_01989 PF02153 Prephenate dehydrogenase SUTH_01990 PF00155 Aminotransferase class I and II SUTH_01991 PF00800 Prephenate dehydratase SUTH_01991 PF01817 Chorismate mutase type II SUTH_01991 PF01842 ACT domain SUTH_01992 PF01842 ACT domain SUTH_01992 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain SUTH_01992 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain SUTH_01993 PF00266 Aminotransferase class-V SUTH_01994 PF00521 DNA gyrase/topoisomerase IV, subunit A SUTH_01994 PF03989 DNA gyrase C-terminal domain, beta-propeller SUTH_01995 PF01979 Amidohydrolase family SUTH_01996 PF00691 OmpA family SUTH_01998 PF13419 Haloacid dehalogenase-like hydrolase SUTH_02001 PF07730 Histidine kinase SUTH_02001 PF17200 Single Cache domain 2 SUTH_02002 PF00072 Response regulator receiver domain SUTH_02002 PF00196 Bacterial regulatory proteins, luxR family SUTH_02003 PF00990 Diguanylate cyclase, GGDEF domain SUTH_02003 PF00072 Response regulator receiver domain SUTH_02004 PF01769 Divalent cation transporter SUTH_02004 PF03448 MgtE intracellular N domain SUTH_02004 PF00571 CBS domain SUTH_02005 PF00069 Protein kinase domain SUTH_02005 PF03793 PASTA domain SUTH_02007 PF01053 Cys/Met metabolism PLP-dependent enzyme SUTH_02008 PF12697 Alpha/beta hydrolase family SUTH_02010 PF07690 Major Facilitator Superfamily SUTH_02011 PF07947 YhhN family SUTH_02012 PF03707 Bacterial signalling protein N terminal repeat SUTH_02012 PF00990 Diguanylate cyclase, GGDEF domain SUTH_02012 PF00563 EAL domain SUTH_02015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SUTH_02015 PF13426 PAS domain SUTH_02015 PF08448 PAS fold SUTH_02015 PF00072 Response regulator receiver domain SUTH_02015 PF00512 His Kinase A (phospho-acceptor) domain SUTH_02017 PF00374 Nickel-dependent hydrogenase SUTH_02018 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal SUTH_02018 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit SUTH_02019 PF02954 Bacterial regulatory protein, Fis family SUTH_02019 PF00072 Response regulator receiver domain SUTH_02019 PF00158 Sigma-54 interaction domain SUTH_02020 PF00378 Enoyl-CoA hydratase/isomerase SUTH_02020 PF02911 Formyl transferase, C-terminal domain SUTH_02020 PF00551 Formyl transferase SUTH_02021 PF00586 AIR synthase related protein, N-terminal domain SUTH_02021 PF02769 AIR synthase related protein, C-terminal domain SUTH_02022 PF01924 Hydrogenase formation hypA family SUTH_02023 PF01455 HupF/HypC family SUTH_02024 PF07503 HypF finger SUTH_02024 PF01300 Telomere recombination SUTH_02024 PF17788 HypF Kae1-like domain SUTH_02024 PF00708 Acylphosphatase SUTH_02025 PF02492 CobW/HypB/UreG, nucleotide-binding domain SUTH_02026 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA SUTH_02028 PF11939 [NiFe]-hydrogenase assembly, chaperone, HybE SUTH_02028 PF00301 Rubredoxin SUTH_02029 PF01455 HupF/HypC family SUTH_02030 PF01750 Hydrogenase maturation protease SUTH_02031 PF00374 Nickel-dependent hydrogenase SUTH_02032 PF03916 Polysulphide reductase, NrfD SUTH_02033 PF13247 4Fe-4S dicluster domain SUTH_02034 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit SUTH_02034 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal SUTH_02038 PF09828 Chromate resistance exported protein SUTH_02040 PF09905 DNA-binding protein VF530 SUTH_02042 PF00176 SNF2 family N-terminal domain SUTH_02042 PF12419 SNF2 Helicase protein SUTH_02042 PF00271 Helicase conserved C-terminal domain SUTH_02044 PF03707 Bacterial signalling protein N terminal repeat SUTH_02044 PF00990 Diguanylate cyclase, GGDEF domain SUTH_02044 PF00563 EAL domain SUTH_02046 PF01402 Ribbon-helix-helix protein, copG family SUTH_02046 PF08753 NikR C terminal nickel binding domain SUTH_02049 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit SUTH_02049 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region SUTH_02050 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region SUTH_02051 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit SUTH_02052 PF00374 Nickel-dependent hydrogenase SUTH_02054 PF00723 Glycosyl hydrolases family 15 SUTH_02055 PF02358 Trehalose-phosphatase SUTH_02056 PF00982 Glycosyltransferase family 20 SUTH_02058 PF00512 His Kinase A (phospho-acceptor) domain SUTH_02058 PF00989 PAS fold SUTH_02058 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SUTH_02059 PF00196 Bacterial regulatory proteins, luxR family SUTH_02059 PF00072 Response regulator receiver domain SUTH_02064 PF00563 EAL domain SUTH_02064 PF08668 HDOD domain SUTH_02065 PF13167 GTP-binding GTPase N-terminal SUTH_02065 PF01926 50S ribosome-binding GTPase SUTH_02065 PF16360 GTP-binding GTPase Middle Region SUTH_02066 PF00561 alpha/beta hydrolase fold SUTH_02067 PF02798 Glutathione S-transferase, N-terminal domain SUTH_02073 PF00378 Enoyl-CoA hydratase/isomerase SUTH_02074 PF00501 AMP-binding enzyme SUTH_02075 PF00005 ABC transporter SUTH_02078 PF02653 Branched-chain amino acid transport system / permease component SUTH_02079 PF12399 Branched-chain amino acid ATP-binding cassette transporter SUTH_02079 PF00005 ABC transporter SUTH_02080 PF00440 Bacterial regulatory proteins, tetR family SUTH_02083 PF01758 Sodium Bile acid symporter family SUTH_02084 PF00205 Thiamine pyrophosphate enzyme, central domain SUTH_02084 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain SUTH_02084 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain SUTH_02085 PF00205 Thiamine pyrophosphate enzyme, central domain SUTH_02085 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain SUTH_02085 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain SUTH_02086 PF01614 Bacterial transcriptional regulator SUTH_02086 PF09339 IclR helix-turn-helix domain SUTH_02087 PF07995 Glucose / Sorbosone dehydrogenase SUTH_02088 PF01515 Phosphate acetyl/butaryl transferase SUTH_02089 PF00871 Acetokinase family SUTH_02090 PF00317 Ribonucleotide reductase, all-alpha domain SUTH_02090 PF02867 Ribonucleotide reductase, barrel domain SUTH_02090 PF03477 ATP cone domain SUTH_02091 PF00072 Response regulator receiver domain SUTH_02092 PF00072 Response regulator receiver domain SUTH_02093 PF00563 EAL domain SUTH_02093 PF13426 PAS domain SUTH_02093 PF00990 Diguanylate cyclase, GGDEF domain SUTH_02094 PF01339 CheB methylesterase SUTH_02094 PF01739 CheR methyltransferase, SAM binding domain SUTH_02094 PF03705 CheR methyltransferase, all-alpha domain SUTH_02094 PF08448 PAS fold SUTH_02095 PF00672 HAMP domain SUTH_02095 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) SUTH_02095 PF00072 Response regulator receiver domain SUTH_02095 PF01627 Hpt domain SUTH_02095 PF00512 His Kinase A (phospho-acceptor) domain SUTH_02095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SUTH_02097 PF00512 His Kinase A (phospho-acceptor) domain SUTH_02097 PF01627 Hpt domain SUTH_02097 PF00072 Response regulator receiver domain SUTH_02097 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SUTH_02097 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) SUTH_02097 PF00672 HAMP domain SUTH_02107 PF07992 Pyridine nucleotide-disulphide oxidoreductase SUTH_02109 PF00211 Adenylate and Guanylate cyclase catalytic domain SUTH_02110 PF00512 His Kinase A (phospho-acceptor) domain SUTH_02110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SUTH_02111 PF11849 Domain of unknown function (DUF3369) SUTH_02112 PF04386 Stringent starvation protein B SUTH_02113 PF00043 Glutathione S-transferase, C-terminal domain SUTH_02113 PF02798 Glutathione S-transferase, N-terminal domain SUTH_02114 PF02167 Cytochrome C1 family SUTH_02115 PF00032 Cytochrome b(C-terminal)/b6/petD SUTH_02115 PF00033 Cytochrome b/b6/petB SUTH_02116 PF00355 Rieske [2Fe-2S] domain SUTH_02116 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal SUTH_02117 PF02515 CoA-transferase family III SUTH_02118 PF13662 Toprim domain SUTH_02118 PF02132 RecR protein SUTH_02119 PF02575 YbaB/EbfC DNA-binding family SUTH_02120 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding SUTH_02120 PF12169 DNA polymerase III subunits gamma and tau domain III SUTH_02120 PF12170 DNA polymerase III tau subunit V interacting with alpha SUTH_02125 PF14759 Reductase C-terminal SUTH_02125 PF07992 Pyridine nucleotide-disulphide oxidoreductase SUTH_02126 PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 SUTH_02126 PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain SUTH_02127 PF13247 4Fe-4S dicluster domain SUTH_02129 PF01636 Phosphotransferase enzyme family SUTH_02130 PF03772 Competence protein SUTH_02130 PF00753 Metallo-beta-lactamase superfamily SUTH_02133 PF01557 Fumarylacetoacetate (FAA) hydrolase family SUTH_02135 PF00005 ABC transporter SUTH_02136 PF02687 FtsX-like permease family SUTH_02136 PF12704 MacB-like periplasmic core domain SUTH_02139 PF00589 Phage integrase family SUTH_02139 PF02899 Phage integrase, N-terminal SAM-like domain SUTH_02143 PF17768 RecJ OB domain SUTH_02143 PF02272 DHHA1 domain SUTH_02143 PF01368 DHH family SUTH_02144 PF00563 EAL domain SUTH_02144 PF03707 Bacterial signalling protein N terminal repeat SUTH_02144 PF00990 Diguanylate cyclase, GGDEF domain SUTH_02146 PF02540 NAD synthase SUTH_02147 PF02146 Sir2 family SUTH_02152 PF00563 EAL domain SUTH_02152 PF03707 Bacterial signalling protein N terminal repeat SUTH_02152 PF00990 Diguanylate cyclase, GGDEF domain SUTH_02153 PF01965 DJ-1/PfpI family SUTH_02154 PF00009 Elongation factor Tu GTP binding domain SUTH_02154 PF16658 Class II release factor RF3, C-terminal domain SUTH_02154 PF03144 Elongation factor Tu domain 2 SUTH_02156 PF01037 Lrp/AsnC ligand binding domain SUTH_02158 PF08546 Ketopantoate reductase PanE/ApbA C terminal SUTH_02158 PF02558 Ketopantoate reductase PanE/ApbA SUTH_02159 PF06463 Molybdenum Cofactor Synthesis C SUTH_02159 PF04055 Radical SAM superfamily SUTH_02160 PF03453 MoeA N-terminal region (domain I and II) SUTH_02160 PF00994 Probable molybdopterin binding domain SUTH_02160 PF03454 MoeA C-terminal region (domain IV) SUTH_02161 PF01435 Peptidase family M48 SUTH_02162 PF01263 Aldose 1-epimerase SUTH_02164 PF00296 Luciferase-like monooxygenase SUTH_02165 PF13545 Crp-like helix-turn-helix domain SUTH_02165 PF00027 Cyclic nucleotide-binding domain SUTH_02166 PF12704 MacB-like periplasmic core domain SUTH_02166 PF02687 FtsX-like permease family SUTH_02166 PF00005 ABC transporter SUTH_02167 PF12704 MacB-like periplasmic core domain SUTH_02167 PF02687 FtsX-like permease family SUTH_02167 PF00005 ABC transporter SUTH_02168 PF02687 FtsX-like permease family SUTH_02168 PF00005 ABC transporter SUTH_02168 PF12704 MacB-like periplasmic core domain SUTH_02172 PF03960 ArsC family SUTH_02173 PF01430 Hsp33 protein SUTH_02174 PF17284 Spermidine synthase tetramerisation domain SUTH_02175 PF00892 EamA-like transporter family SUTH_02179 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system SUTH_02181 PF00933 Glycosyl hydrolase family 3 N terminal domain SUTH_02182 PF01648 4'-phosphopantetheinyl transferase superfamily SUTH_02183 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ SUTH_02184 PF02565 Recombination protein O C terminal SUTH_02184 PF11967 Recombination protein O N terminal SUTH_02185 PF07650 KH domain SUTH_02185 PF01926 50S ribosome-binding GTPase SUTH_02186 PF00035 Double-stranded RNA binding motif SUTH_02186 PF14622 Ribonuclease-III-like SUTH_02188 PF10502 Signal peptidase, peptidase S26 SUTH_02189 PF03144 Elongation factor Tu domain 2 SUTH_02189 PF06421 GTP-binding protein LepA C-terminus SUTH_02189 PF00009 Elongation factor Tu GTP binding domain SUTH_02189 PF00679 Elongation factor G C-terminus SUTH_02191 PF13180 PDZ domain SUTH_02195 PF04542 Sigma-70 region 2 SUTH_02195 PF08281 Sigma-70, region 4 SUTH_02196 PF02910 Fumarate reductase flavoprotein C-term SUTH_02196 PF00890 FAD binding domain SUTH_02198 PF02801 Beta-ketoacyl synthase, C-terminal domain SUTH_02198 PF00109 Beta-ketoacyl synthase, N-terminal domain SUTH_02199 PF00550 Phosphopantetheine attachment site SUTH_02201 PF00698 Acyl transferase domain SUTH_02202 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III SUTH_02202 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal SUTH_02203 PF02504 Fatty acid synthesis protein SUTH_02204 PF01783 Ribosomal L32p protein family SUTH_02206 PF02545 Maf-like protein SUTH_02207 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases SUTH_02208 PF10017 Histidine-specific methyltransferase, SAM-dependent SUTH_02209 PF02769 AIR synthase related protein, C-terminal domain SUTH_02209 PF00586 AIR synthase related protein, N-terminal domain SUTH_02210 PF00534 Glycosyl transferases group 1 SUTH_02211 PF03781 Sulfatase-modifying factor enzyme 1 SUTH_02216 PF01384 Phosphate transporter family SUTH_02219 PF01266 FAD dependent oxidoreductase SUTH_02220 PF01641 SelR domain SUTH_02221 PF04279 Intracellular septation protein A SUTH_02222 PF03795 YCII-related domain SUTH_02223 PF01722 BolA-like protein SUTH_02225 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal SUTH_02225 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain SUTH_02225 PF02769 AIR synthase related protein, C-terminal domain SUTH_02226 PF00990 Diguanylate cyclase, GGDEF domain SUTH_02227 PF00085 Thioredoxin SUTH_02228 PF03707 Bacterial signalling protein N terminal repeat SUTH_02228 PF00990 Diguanylate cyclase, GGDEF domain SUTH_02228 PF00563 EAL domain SUTH_02229 PF00180 Isocitrate/isopropylmalate dehydrogenase SUTH_02229 PF18324 Hypothetical protein TT1725 SUTH_02231 PF18073 Rubredoxin metal binding domain SUTH_02233 PF00881 Nitroreductase family SUTH_02237 PF13005 zinc-finger binding domain of transposase IS66 SUTH_02237 PF13817 IS66 C-terminal element SUTH_02237 PF03050 Transposase IS66 family SUTH_02237 PF13007 Transposase C of IS166 homeodomain SUTH_02238 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SUTH_02238 PF03466 LysR substrate binding domain SUTH_02239 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain SUTH_02239 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain SUTH_02240 PF00528 Binding-protein-dependent transport system inner membrane component SUTH_02242 PF00005 ABC transporter SUTH_02243 PF18073 Rubredoxin metal binding domain SUTH_02244 PF17841 BID domain of Bartonella effector protein (Bep) SUTH_02244 PF03389 MobA/MobL family SUTH_02244 PF01443 Viral (Superfamily 1) RNA helicase SUTH_02249 PF18073 Rubredoxin metal binding domain SUTH_02250 PF00842 Alanine racemase, C-terminal domain SUTH_02250 PF01168 Alanine racemase, N-terminal domain SUTH_02251 PF03466 LysR substrate binding domain SUTH_02251 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SUTH_02252 PF07690 Major Facilitator Superfamily SUTH_02254 PF03167 Uracil DNA glycosylase superfamily SUTH_02256 PF00814 Glycoprotease family SUTH_02257 PF01145 SPFH domain / Band 7 family SUTH_02257 PF16200 C-terminal region of band_7 SUTH_02259 PF00216 Bacterial DNA-binding protein SUTH_02260 PF08032 RNA 2'-O ribose methyltransferase substrate binding SUTH_02260 PF00588 SpoU rRNA Methylase family SUTH_02261 PF01351 Ribonuclease HII SUTH_02262 PF02684 Lipid-A-disaccharide synthetase SUTH_02263 PF00132 Bacterial transferase hexapeptide (six repeats) SUTH_02263 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 SUTH_02264 PF07977 FabA-like domain SUTH_02265 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD SUTH_02265 PF14602 Hexapeptide repeat of succinyl-transferase SUTH_02265 PF00132 Bacterial transferase hexapeptide (six repeats) SUTH_02267 PF07244 Surface antigen variable number repeat SUTH_02267 PF01103 Surface antigen SUTH_02268 PF02163 Peptidase family M50 SUTH_02268 PF17820 PDZ domain SUTH_02268 PF13180 PDZ domain SUTH_02269 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase SUTH_02269 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain SUTH_02269 PF13288 DXP reductoisomerase C-terminal domain SUTH_02271 PF01255 Putative undecaprenyl diphosphate synthase SUTH_02272 PF01765 Ribosome recycling factor SUTH_02273 PF00696 Amino acid kinase family SUTH_02274 PF00889 Elongation factor TS SUTH_02275 PF00318 Ribosomal protein S2 SUTH_02277 PF00557 Metallopeptidase family M24 SUTH_02278 PF08335 GlnD PII-uridylyltransferase SUTH_02278 PF01966 HD domain SUTH_02280 PF01814 Hemerythrin HHE cation binding domain SUTH_02282 PF07087 Protein of unknown function (DUF1353) SUTH_02285 PF13416 Bacterial extracellular solute-binding protein SUTH_02286 PF00528 Binding-protein-dependent transport system inner membrane component SUTH_02287 PF00528 Binding-protein-dependent transport system inner membrane component SUTH_02288 PF08402 TOBE domain SUTH_02288 PF00005 ABC transporter SUTH_02290 PF12705 PD-(D/E)XK nuclease superfamily SUTH_02290 PF00580 UvrD/REP helicase N-terminal domain SUTH_02290 PF13361 UvrD-like helicase C-terminal domain SUTH_02291 PF12705 PD-(D/E)XK nuclease superfamily SUTH_02293 PF02646 RmuC family SUTH_02294 PF01479 S4 domain SUTH_02296 PF01575 MaoC like domain SUTH_02299 PF07670 Nucleoside recognition SUTH_02299 PF02421 Ferrous iron transport protein B SUTH_02299 PF17910 FeoB cytosolic helical domain SUTH_02299 PF07664 Ferrous iron transport protein B C terminus SUTH_02299 PF04023 FeoA domain SUTH_02302 PF00929 Exonuclease SUTH_02304 PF00072 Response regulator receiver domain SUTH_02304 PF00486 Transcriptional regulatory protein, C terminal SUTH_02305 PF16736 Single Cache-like SUTH_02305 PF00512 His Kinase A (phospho-acceptor) domain SUTH_02305 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SUTH_02305 PF00989 PAS fold SUTH_02307 PF00501 AMP-binding enzyme SUTH_02307 PF16177 Acetyl-coenzyme A synthetase N-terminus SUTH_02307 PF13193 AMP-binding enzyme C-terminal domain SUTH_02308 PF03350 Uncharacterized protein family, UPF0114 SUTH_02311 PF01177 Asp/Glu/Hydantoin racemase SUTH_02313 PF04607 Region found in RelA / SpoT proteins SUTH_02313 PF02824 TGS domain SUTH_02313 PF13291 ACT domain SUTH_02315 PF06167 Glucose-regulated metallo-peptidase M90 SUTH_02316 PF03707 Bacterial signalling protein N terminal repeat SUTH_02316 PF00990 Diguanylate cyclase, GGDEF domain SUTH_02316 PF00563 EAL domain SUTH_02319 PF02770 Acyl-CoA dehydrogenase, middle domain SUTH_02319 PF02771 Acyl-CoA dehydrogenase, N-terminal domain SUTH_02319 PF00441 Acyl-CoA dehydrogenase, C-terminal domain SUTH_02320 PF02771 Acyl-CoA dehydrogenase, N-terminal domain SUTH_02320 PF00441 Acyl-CoA dehydrogenase, C-terminal domain SUTH_02320 PF02770 Acyl-CoA dehydrogenase, middle domain SUTH_02321 PF12806 Acetyl-CoA dehydrogenase C-terminal like SUTH_02321 PF00441 Acyl-CoA dehydrogenase, C-terminal domain SUTH_02321 PF02771 Acyl-CoA dehydrogenase, N-terminal domain SUTH_02321 PF02770 Acyl-CoA dehydrogenase, middle domain SUTH_02322 PF00378 Enoyl-CoA hydratase/isomerase SUTH_02323 PF03061 Thioesterase superfamily SUTH_02325 PF04029 2-phosphosulpholactate phosphatase SUTH_02326 PF01575 MaoC like domain SUTH_02326 PF00171 Aldehyde dehydrogenase family SUTH_02327 PF13193 AMP-binding enzyme C-terminal domain SUTH_02327 PF00501 AMP-binding enzyme SUTH_02328 PF00378 Enoyl-CoA hydratase/isomerase SUTH_02329 PF00561 alpha/beta hydrolase fold SUTH_02333 PF09339 IclR helix-turn-helix domain SUTH_02335 PF07690 Major Facilitator Superfamily SUTH_02336 PF00501 AMP-binding enzyme SUTH_02336 PF13193 AMP-binding enzyme C-terminal domain SUTH_02338 PF00441 Acyl-CoA dehydrogenase, C-terminal domain SUTH_02338 PF02770 Acyl-CoA dehydrogenase, middle domain SUTH_02338 PF02771 Acyl-CoA dehydrogenase, N-terminal domain SUTH_02339 PF00441 Acyl-CoA dehydrogenase, C-terminal domain SUTH_02339 PF02770 Acyl-CoA dehydrogenase, middle domain SUTH_02339 PF02771 Acyl-CoA dehydrogenase, N-terminal domain SUTH_02341 PF00107 Zinc-binding dehydrogenase SUTH_02341 PF08240 Alcohol dehydrogenase GroES-like domain SUTH_02344 PF00849 RNA pseudouridylate synthase SUTH_02347 PF00072 Response regulator receiver domain SUTH_02347 PF01627 Hpt domain SUTH_02347 PF00512 His Kinase A (phospho-acceptor) domain SUTH_02347 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SUTH_02348 PF17785 PUA-like domain SUTH_02348 PF10672 S-adenosylmethionine-dependent methyltransferase SUTH_02349 PF00085 Thioredoxin SUTH_02350 PF03880 DbpA RNA binding domain SUTH_02350 PF00271 Helicase conserved C-terminal domain SUTH_02350 PF00270 DEAD/DEAH box helicase SUTH_02351 PF00132 Bacterial transferase hexapeptide (six repeats) SUTH_02352 PF04977 Septum formation initiator SUTH_02353 PF00113 Enolase, C-terminal TIM barrel domain SUTH_02353 PF03952 Enolase, N-terminal domain SUTH_02355 PF00793 DAHP synthetase I family SUTH_02356 PF00117 Glutamine amidotransferase class-I SUTH_02356 PF06418 CTP synthase N-terminus SUTH_02358 PF03462 PCRF domain SUTH_02358 PF00472 RF-1 domain SUTH_02363 PF00152 tRNA synthetases class II (D, K and N) SUTH_02363 PF01336 OB-fold nucleic acid binding domain SUTH_02364 PF01266 FAD dependent oxidoreductase SUTH_02364 PF05430 S-adenosyl-L-methionine-dependent methyltransferase SUTH_02367 PF00749 tRNA synthetases class I (E and Q), catalytic domain SUTH_02370 PF13533 Biotin-lipoyl like SUTH_02371 PF00005 ABC transporter SUTH_02371 PF00664 ABC transporter transmembrane region SUTH_02373 PF13191 AAA ATPase domain SUTH_02373 PF00211 Adenylate and Guanylate cyclase catalytic domain SUTH_02375 PF01842 ACT domain SUTH_02375 PF13840 ACT domain SUTH_02375 PF00696 Amino acid kinase family SUTH_02378 PF01242 6-pyruvoyl tetrahydropterin synthase SUTH_02379 PF13193 AMP-binding enzyme C-terminal domain SUTH_02379 PF00501 AMP-binding enzyme SUTH_02380 PF14497 Glutathione S-transferase, C-terminal domain SUTH_02380 PF13417 Glutathione S-transferase, N-terminal domain SUTH_02381 PF00378 Enoyl-CoA hydratase/isomerase SUTH_02385 PF14338 Mrr N-terminal domain SUTH_02385 PF04471 Restriction endonuclease SUTH_02387 PF00106 short chain dehydrogenase SUTH_02388 PF01565 FAD binding domain SUTH_02388 PF04030 D-arabinono-1,4-lactone oxidase SUTH_02398 PF13629 Pilus formation protein N terminal region SUTH_02398 PF00263 Bacterial type II and III secretion system protein SUTH_02398 PF04972 BON domain SUTH_02399 PF00437 Type II/IV secretion system protein SUTH_02405 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB SUTH_02405 PF08479 POTRA domain, ShlB-type SUTH_02405 PF17287 POTRA domain SUTH_02412 PF01027 Inhibitor of apoptosis-promoting Bax1 SUTH_02413 PF05958 tRNA (Uracil-5-)-methyltransferase SUTH_02416 PF03099 Biotin/lipoate A/B protein ligase family SUTH_02416 PF12706 Beta-lactamase superfamily domain SUTH_02417 PF06804 NlpB/DapX lipoprotein SUTH_02418 PF00701 Dihydrodipicolinate synthetase family SUTH_02419 PF00850 Histone deacetylase domain SUTH_02420 PF07726 ATPase family associated with various cellular activities (AAA) SUTH_02420 PF17863 AAA lid domain SUTH_02422 PF13559 Domain of unknown function (DUF4129) SUTH_02422 PF11992 Domain of unknown function (DUF3488) SUTH_02422 PF01841 Transglutaminase-like superfamily SUTH_02423 PF13406 Transglycosylase SLT domain SUTH_02424 PF04542 Sigma-70 region 2 SUTH_02424 PF00140 Sigma-70 factor, region 1.2 SUTH_02424 PF04539 Sigma-70 region 3 SUTH_02424 PF04545 Sigma-70, region 4 SUTH_02425 PF01551 Peptidase family M23 SUTH_02425 PF01476 LysM domain SUTH_02427 PF01975 Survival protein SurE SUTH_02433 PF00216 Bacterial DNA-binding protein SUTH_02434 PF03147 Ferredoxin-fold anticodon binding domain SUTH_02434 PF03483 B3/4 domain SUTH_02434 PF03484 tRNA synthetase B5 domain SUTH_02434 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain SUTH_02434 PF01588 Putative tRNA binding domain SUTH_02435 PF01409 tRNA synthetases class II core domain (F) SUTH_02435 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain SUTH_02436 PF00453 Ribosomal protein L20 SUTH_02437 PF01632 Ribosomal protein L35 SUTH_02438 PF00707 Translation initiation factor IF-3, C-terminal domain SUTH_02438 PF05198 Translation initiation factor IF-3, N-terminal domain SUTH_02439 PF02824 TGS domain SUTH_02439 PF03129 Anticodon binding domain SUTH_02439 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain SUTH_02439 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) SUTH_02442 PF00501 AMP-binding enzyme SUTH_02442 PF13193 AMP-binding enzyme C-terminal domain SUTH_02442 PF16177 Acetyl-coenzyme A synthetase N-terminus SUTH_02443 PF08240 Alcohol dehydrogenase GroES-like domain SUTH_02443 PF00107 Zinc-binding dehydrogenase SUTH_02444 PF00877 NlpC/P60 family SUTH_02445 PF13416 Bacterial extracellular solute-binding protein SUTH_02447 PF00528 Binding-protein-dependent transport system inner membrane component SUTH_02448 PF17845 FbpC C-terminal regulatory nucleotide binding domain SUTH_02448 PF00005 ABC transporter SUTH_02449 PF03588 Leucyl/phenylalanyl-tRNA protein transferase SUTH_02450 PF04377 Arginine-tRNA-protein transferase, C terminus SUTH_02450 PF04376 Arginine-tRNA-protein transferase, N terminus SUTH_02452 PF13145 PPIC-type PPIASE domain SUTH_02454 PF02190 ATP-dependent protease La (LON) substrate-binding domain SUTH_02454 PF00004 ATPase family associated with various cellular activities (AAA) SUTH_02454 PF05362 Lon protease (S16) C-terminal proteolytic domain SUTH_02455 PF06689 ClpX C4-type zinc finger SUTH_02455 PF07724 AAA domain (Cdc48 subfamily) SUTH_02455 PF10431 C-terminal, D2-small domain, of ClpB protein SUTH_02456 PF00574 Clp protease SUTH_02457 PF05697 Bacterial trigger factor protein (TF) SUTH_02457 PF05698 Bacterial trigger factor protein (TF) C-terminus SUTH_02457 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase SUTH_02461 PF01593 Flavin containing amine oxidoreductase SUTH_02462 PF00005 ABC transporter SUTH_02463 PF13472 GDSL-like Lipase/Acylhydrolase family SUTH_02464 PF00581 Rhodanese-like domain SUTH_02465 PF04397 LytTr DNA-binding domain SUTH_02465 PF00072 Response regulator receiver domain SUTH_02466 PF06580 Histidine kinase SUTH_02466 PF07694 5TMR of 5TMR-LYT SUTH_02468 PF13649 Methyltransferase domain SUTH_02469 PF00672 HAMP domain SUTH_02469 PF00211 Adenylate and Guanylate cyclase catalytic domain SUTH_02470 PF00583 Acetyltransferase (GNAT) family SUTH_02470 PF13380 CoA binding domain SUTH_02470 PF13607 Succinyl-CoA ligase like flavodoxin domain SUTH_02471 PF03352 Methyladenine glycosylase SUTH_02472 PF00211 Adenylate and Guanylate cyclase catalytic domain SUTH_02473 PF00501 AMP-binding enzyme SUTH_02473 PF13193 AMP-binding enzyme C-terminal domain SUTH_02474 PF07690 Major Facilitator Superfamily SUTH_02478 PF17871 AAA lid domain SUTH_02478 PF02861 Clp amino terminal domain, pathogenicity island component SUTH_02478 PF07724 AAA domain (Cdc48 subfamily) SUTH_02478 PF00004 ATPase family associated with various cellular activities (AAA) SUTH_02478 PF10431 C-terminal, D2-small domain, of ClpB protein SUTH_02479 PF01627 Hpt domain SUTH_02479 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) SUTH_02479 PF00672 HAMP domain SUTH_02479 PF00072 Response regulator receiver domain SUTH_02479 PF00512 His Kinase A (phospho-acceptor) domain SUTH_02479 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SUTH_02480 PF00072 Response regulator receiver domain SUTH_02484 PF02391 MoaE protein SUTH_02485 PF02597 ThiS family SUTH_02486 PF03454 MoeA C-terminal region (domain IV) SUTH_02486 PF00994 Probable molybdopterin binding domain SUTH_02486 PF03453 MoeA N-terminal region (domain I and II) SUTH_02487 PF03205 Molybdopterin guanine dinucleotide synthesis protein B SUTH_02489 PF06733 DEAD_2 SUTH_02489 PF13307 Helicase C-terminal domain SUTH_02492 PF12800 4Fe-4S binding domain SUTH_02492 PF13247 4Fe-4S dicluster domain SUTH_02500 PF01053 Cys/Met metabolism PLP-dependent enzyme SUTH_02501 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I SUTH_02501 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III SUTH_02501 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain SUTH_02501 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II SUTH_02502 PF01339 CheB methylesterase SUTH_02502 PF08448 PAS fold SUTH_02502 PF03705 CheR methyltransferase, all-alpha domain SUTH_02502 PF01739 CheR methyltransferase, SAM binding domain SUTH_02503 PF05231 MASE1 SUTH_02503 PF13426 PAS domain SUTH_02503 PF08448 PAS fold SUTH_02503 PF00563 EAL domain SUTH_02503 PF00990 Diguanylate cyclase, GGDEF domain SUTH_02503 PF08447 PAS fold SUTH_02504 PF07568 Histidine kinase SUTH_02504 PF12282 Signal transduction histidine kinase SUTH_02504 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SUTH_02505 PF00486 Transcriptional regulatory protein, C terminal SUTH_02505 PF00072 Response regulator receiver domain SUTH_02506 PF00563 EAL domain SUTH_02506 PF00990 Diguanylate cyclase, GGDEF domain SUTH_02506 PF03707 Bacterial signalling protein N terminal repeat SUTH_02507 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) SUTH_02507 PF00512 His Kinase A (phospho-acceptor) domain SUTH_02507 PF00072 Response regulator receiver domain SUTH_02507 PF01627 Hpt domain SUTH_02507 PF00672 HAMP domain SUTH_02507 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SUTH_02508 PF00072 Response regulator receiver domain SUTH_02509 PF00486 Transcriptional regulatory protein, C terminal SUTH_02509 PF00072 Response regulator receiver domain SUTH_02512 PF08031 Berberine and berberine like SUTH_02512 PF01565 FAD binding domain SUTH_02514 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH SUTH_02517 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SUTH_02517 PF03466 LysR substrate binding domain SUTH_02518 PF00171 Aldehyde dehydrogenase family SUTH_02519 PF05199 GMC oxidoreductase SUTH_02519 PF00732 GMC oxidoreductase SUTH_02520 PF00753 Metallo-beta-lactamase superfamily SUTH_02520 PF00258 Flavodoxin SUTH_02522 PF00116 Cytochrome C oxidase subunit II, periplasmic domain SUTH_02522 PF09125 Cytochrome C oxidase subunit II, transmembrane SUTH_02523 PF00115 Cytochrome C and Quinol oxidase polypeptide I SUTH_02524 PF01040 UbiA prenyltransferase family SUTH_02528 PF00175 Oxidoreductase NAD-binding domain SUTH_02528 PF00111 2Fe-2S iron-sulfur cluster binding domain SUTH_02528 PF00970 Oxidoreductase FAD-binding domain SUTH_02530 PF02230 Phospholipase/Carboxylesterase SUTH_02531 PF01966 HD domain SUTH_02531 PF11871 Domain of unknown function (DUF3391) SUTH_02532 PF00115 Cytochrome C and Quinol oxidase polypeptide I SUTH_02533 PF02630 SCO1/SenC SUTH_02535 PF00224 Pyruvate kinase, barrel domain SUTH_02535 PF00224 Pyruvate kinase, barrel domain SUTH_02535 PF02887 Pyruvate kinase, alpha/beta domain SUTH_02535 PF02887 Pyruvate kinase, alpha/beta domain SUTH_02538 PF00027 Cyclic nucleotide-binding domain SUTH_02538 PF13545 Crp-like helix-turn-helix domain SUTH_02541 PF00593 TonB dependent receptor SUTH_02541 PF07715 TonB-dependent Receptor Plug Domain SUTH_02544 PF01618 MotA/TolQ/ExbB proton channel family SUTH_02545 PF02472 Biopolymer transport protein ExbD/TolR SUTH_02549 PF00403 Heavy-metal-associated domain SUTH_02553 PF00578 AhpC/TSA family SUTH_02555 PF12704 MacB-like periplasmic core domain SUTH_02555 PF02687 FtsX-like permease family SUTH_02555 PF00005 ABC transporter SUTH_02558 PF02630 SCO1/SenC SUTH_02560 PF04055 Radical SAM superfamily SUTH_02560 PF06463 Molybdenum Cofactor Synthesis C SUTH_02563 PF08534 Redoxin SUTH_02566 PF00005 ABC transporter SUTH_02567 PF12801 4Fe-4S binding domain SUTH_02567 PF13237 4Fe-4S dicluster domain SUTH_02568 PF12838 4Fe-4S dicluster domain SUTH_02568 PF12800 4Fe-4S binding domain SUTH_02572 PF00034 Cytochrome c SUTH_02573 PF18793 Nitrous oxide reductase propeller repeat 2 SUTH_02573 PF13473 Cupredoxin-like domain SUTH_02573 PF18764 Nitrous oxide reductase propeller repeat SUTH_02575 PF00072 Response regulator receiver domain SUTH_02576 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SUTH_02576 PF00512 His Kinase A (phospho-acceptor) domain SUTH_02578 PF17805 AsnC-like ligand binding domain SUTH_02579 PF13404 AsnC-type helix-turn-helix domain SUTH_02579 PF17805 AsnC-like ligand binding domain SUTH_02580 PF17805 AsnC-like ligand binding domain SUTH_02582 PF13442 Cytochrome C oxidase, cbb3-type, subunit III SUTH_02584 PF09459 Ethylbenzene dehydrogenase SUTH_02585 PF03264 NapC/NirT cytochrome c family, N-terminal region SUTH_02586 PF13442 Cytochrome C oxidase, cbb3-type, subunit III SUTH_02587 PF07715 TonB-dependent Receptor Plug Domain SUTH_02587 PF00593 TonB dependent receptor SUTH_02588 PF01032 FecCD transport family SUTH_02589 PF00005 ABC transporter SUTH_02590 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP SUTH_02590 PF12557 Cob(I)alamin adenosyltransferase N terminal SUTH_02591 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain SUTH_02591 PF07685 CobB/CobQ-like glutamine amidotransferase domain SUTH_02592 PF01497 Periplasmic binding protein SUTH_02593 PF01258 Prokaryotic dksA/traR C4-type zinc finger SUTH_02595 PF00155 Aminotransferase class I and II SUTH_02596 PF03186 CobD/Cbib protein SUTH_02596 PF17113 Regulatory signalling modulator protein AmpE SUTH_02597 PF07685 CobB/CobQ-like glutamine amidotransferase domain SUTH_02599 PF13193 AMP-binding enzyme C-terminal domain SUTH_02599 PF00501 AMP-binding enzyme SUTH_02602 PF01627 Hpt domain SUTH_02602 PF00072 Response regulator receiver domain SUTH_02602 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) SUTH_02602 PF00672 HAMP domain SUTH_02602 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SUTH_02602 PF00512 His Kinase A (phospho-acceptor) domain SUTH_02604 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain SUTH_02604 PF06974 Protein of unknown function (DUF1298) SUTH_02608 PF00202 Aminotransferase class-III SUTH_02609 PF00465 Iron-containing alcohol dehydrogenase SUTH_02610 PF00732 GMC oxidoreductase SUTH_02610 PF05199 GMC oxidoreductase SUTH_02611 PF01674 Lipase (class 2) SUTH_02612 PF00171 Aldehyde dehydrogenase family SUTH_02618 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase SUTH_02621 PF02277 Phosphoribosyltransferase SUTH_02622 PF02654 Cobalamin-5-phosphate synthase SUTH_02624 PF03707 Bacterial signalling protein N terminal repeat SUTH_02624 PF00990 Diguanylate cyclase, GGDEF domain SUTH_02624 PF00563 EAL domain SUTH_02625 PF01661 Macro domain SUTH_02627 PF05598 Transposase domain (DUF772) SUTH_02627 PF01609 Transposase DDE domain SUTH_02633 PF05840 Bacteriophage replication gene A protein (GPA) SUTH_02640 PF02913 FAD linked oxidases, C-terminal domain SUTH_02640 PF01565 FAD binding domain SUTH_02641 PF00919 Uncharacterized protein family UPF0004 SUTH_02641 PF18693 TRAM domain SUTH_02641 PF04055 Radical SAM superfamily SUTH_02642 PF05233 PHB accumulation regulatory domain SUTH_02642 PF07879 PHB/PHA accumulation regulator DNA-binding domain SUTH_02643 PF00106 short chain dehydrogenase SUTH_02644 PF00106 short chain dehydrogenase SUTH_02645 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus SUTH_02649 PF00849 RNA pseudouridylate synthase SUTH_02650 PF13525 Outer membrane lipoprotein SUTH_02651 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain SUTH_02651 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain SUTH_02651 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain SUTH_02654 PF00672 HAMP domain SUTH_02654 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) SUTH_02654 PF00072 Response regulator receiver domain SUTH_02654 PF01627 Hpt domain SUTH_02654 PF00512 His Kinase A (phospho-acceptor) domain SUTH_02654 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SUTH_02655 PF00072 Response regulator receiver domain SUTH_02655 PF01627 Hpt domain SUTH_02655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SUTH_02655 PF00672 HAMP domain SUTH_02655 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) SUTH_02655 PF00512 His Kinase A (phospho-acceptor) domain SUTH_02656 PF08032 RNA 2'-O ribose methyltransferase substrate binding SUTH_02656 PF00588 SpoU rRNA Methylase family SUTH_02657 PF12794 Mechanosensitive ion channel inner membrane domain 1 SUTH_02657 PF12795 Mechanosensitive ion channel porin domain SUTH_02657 PF00924 Mechanosensitive ion channel SUTH_02658 PF13091 PLD-like domain SUTH_02659 PF01029 NusB family SUTH_02659 PF01189 16S rRNA methyltransferase RsmB/F SUTH_02661 PF00551 Formyl transferase SUTH_02663 PF09335 SNARE associated Golgi protein SUTH_02664 PF01119 DNA mismatch repair protein, C-terminal domain SUTH_02664 PF08676 MutL C terminal dimerisation domain SUTH_02668 PF00586 AIR synthase related protein, N-terminal domain SUTH_02668 PF02769 AIR synthase related protein, C-terminal domain SUTH_02669 PF01594 AI-2E family transporter SUTH_02670 PF00308 Bacterial dnaA protein SUTH_02674 PF03061 Thioesterase superfamily SUTH_02678 PF08281 Sigma-70, region 4 SUTH_02678 PF04542 Sigma-70 region 2 SUTH_02681 PF00890 FAD binding domain SUTH_02682 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain SUTH_02682 PF00205 Thiamine pyrophosphate enzyme, central domain SUTH_02682 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain SUTH_02684 PF03707 Bacterial signalling protein N terminal repeat SUTH_02684 PF00990 Diguanylate cyclase, GGDEF domain SUTH_02684 PF00563 EAL domain SUTH_02685 PF00892 EamA-like transporter family SUTH_02687 PF02609 Exonuclease VII small subunit SUTH_02688 PF00348 Polyprenyl synthetase SUTH_02689 PF13292 1-deoxy-D-xylulose-5-phosphate synthase SUTH_02689 PF02779 Transketolase, pyrimidine binding domain SUTH_02689 PF02780 Transketolase, C-terminal domain SUTH_02690 PF02649 Type I GTP cyclohydrolase folE2 SUTH_02691 PF01245 Ribosomal protein L19 SUTH_02692 PF01746 tRNA (Guanine-1)-methyltransferase SUTH_02693 PF01782 RimM N-terminal domain SUTH_02693 PF05239 PRC-barrel domain SUTH_02694 PF00886 Ribosomal protein S16 SUTH_02695 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family SUTH_02697 PF03631 Virulence factor BrkB SUTH_02698 PF03358 NADPH-dependent FMN reductase SUTH_02700 PF00682 HMGL-like SUTH_02700 PF08502 LeuA allosteric (dimerisation) domain SUTH_02702 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain SUTH_02702 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain SUTH_02703 PF10369 Small subunit of acetolactate synthase SUTH_02704 PF00205 Thiamine pyrophosphate enzyme, central domain SUTH_02704 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain SUTH_02704 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain SUTH_02710 PF03739 Lipopolysaccharide export system permease LptF/LptG SUTH_02711 PF00883 Cytosol aminopeptidase family, catalytic domain SUTH_02711 PF02789 Cytosol aminopeptidase family, N-terminal domain SUTH_02712 PF04364 DNA polymerase III chi subunit, HolC SUTH_02714 PF00043 Glutathione S-transferase, C-terminal domain SUTH_02714 PF13417 Glutathione S-transferase, N-terminal domain SUTH_02715 PF00206 Lyase SUTH_02715 PF08328 Adenylosuccinate lyase C-terminal SUTH_02717 PF01322 Cytochrome C' SUTH_02719 PF02355 Protein export membrane protein SUTH_02719 PF07549 SecD/SecF GG Motif SUTH_02720 PF07549 SecD/SecF GG Motif SUTH_02720 PF02355 Protein export membrane protein SUTH_02720 PF13721 SecD export protein N-terminal TM region SUTH_02721 PF02699 Preprotein translocase subunit SUTH_02722 PF01702 Queuine tRNA-ribosyltransferase SUTH_02723 PF02547 Queuosine biosynthesis protein SUTH_02724 PF00027 Cyclic nucleotide-binding domain SUTH_02724 PF13545 Crp-like helix-turn-helix domain SUTH_02725 PF02705 K+ potassium transporter SUTH_02730 PF00149 Calcineurin-like phosphoesterase SUTH_02730 PF02872 5'-nucleotidase, C-terminal domain SUTH_02731 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion SUTH_02732 PF12704 MacB-like periplasmic core domain SUTH_02732 PF02687 FtsX-like permease family SUTH_02732 PF00005 ABC transporter SUTH_02733 PF02687 FtsX-like permease family SUTH_02733 PF00005 ABC transporter SUTH_02733 PF12704 MacB-like periplasmic core domain SUTH_02738 PF00248 Aldo/keto reductase family SUTH_02741 PF00563 EAL domain SUTH_02741 PF00990 Diguanylate cyclase, GGDEF domain SUTH_02741 PF03707 Bacterial signalling protein N terminal repeat SUTH_02742 PF00486 Transcriptional regulatory protein, C terminal SUTH_02742 PF00072 Response regulator receiver domain SUTH_02743 PF00512 His Kinase A (phospho-acceptor) domain SUTH_02743 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SUTH_02744 PF00270 DEAD/DEAH box helicase SUTH_02744 PF00271 Helicase conserved C-terminal domain SUTH_02745 PF01557 Fumarylacetoacetate (FAA) hydrolase family SUTH_02747 PF00486 Transcriptional regulatory protein, C terminal SUTH_02747 PF00072 Response regulator receiver domain SUTH_02748 PF02261 Aspartate decarboxylase SUTH_02749 PF02569 Pantoate-beta-alanine ligase SUTH_02750 PF02548 Ketopantoate hydroxymethyltransferase SUTH_02752 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) SUTH_02753 PF01743 Poly A polymerase head domain SUTH_02753 PF12626 Polymerase A arginine-rich C-terminus SUTH_02753 PF12627 Probable RNA and SrmB- binding site of polymerase A SUTH_02754 PF00133 tRNA synthetases class I (I, L, M and V) SUTH_02754 PF10458 Valyl tRNA synthetase tRNA binding arm SUTH_02754 PF08264 Anticodon-binding domain of tRNA SUTH_02757 PF13686 DsrE/DsrF/DrsH-like family SUTH_02758 PF01206 Sulfurtransferase TusA SUTH_02759 PF04976 DMSO reductase anchor subunit (DmsC) SUTH_02760 PF13247 4Fe-4S dicluster domain SUTH_02760 PF12800 4Fe-4S binding domain SUTH_02761 PF04879 Molybdopterin oxidoreductase Fe4S4 domain SUTH_02761 PF00384 Molybdopterin oxidoreductase SUTH_02761 PF01568 Molydopterin dinucleotide binding domain SUTH_02765 PF03707 Bacterial signalling protein N terminal repeat SUTH_02765 PF00990 Diguanylate cyclase, GGDEF domain SUTH_02765 PF00563 EAL domain SUTH_02767 PF01593 Flavin containing amine oxidoreductase SUTH_02769 PF02754 Cysteine-rich domain SUTH_02771 PF00890 FAD binding domain SUTH_02772 PF13187 4Fe-4S dicluster domain SUTH_02772 PF12139 Adenosine-5'-phosphosulfate reductase beta subunit SUTH_02773 PF01747 ATP-sulfurylase SUTH_02773 PF14306 PUA-like domain SUTH_02774 PF00483 Nucleotidyl transferase SUTH_02775 PF16363 GDP-mannose 4,6 dehydratase SUTH_02776 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family SUTH_02778 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain SUTH_02778 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain SUTH_02778 PF00205 Thiamine pyrophosphate enzyme, central domain SUTH_02779 PF04055 Radical SAM superfamily SUTH_02779 PF06463 Molybdenum Cofactor Synthesis C SUTH_02786 PF00535 Glycosyl transferase family 2 SUTH_02788 PF00005 ABC transporter SUTH_02792 PF07963 Prokaryotic N-terminal methylation motif SUTH_02792 PF00114 Pilin (bacterial filament) SUTH_02794 PF01966 HD domain SUTH_02795 PF00437 Type II/IV secretion system protein SUTH_02795 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain SUTH_02798 PF00211 Adenylate and Guanylate cyclase catalytic domain SUTH_02799 PF00498 FHA domain SUTH_02801 PF03793 PASTA domain SUTH_02801 PF00069 Protein kinase domain SUTH_02802 PF00549 CoA-ligase SUTH_02802 PF02629 CoA binding domain SUTH_02803 PF08442 ATP-grasp domain SUTH_02803 PF00549 CoA-ligase SUTH_02804 PF02782 FGGY family of carbohydrate kinases, C-terminal domain SUTH_02804 PF00370 FGGY family of carbohydrate kinases, N-terminal domain SUTH_02805 PF00132 Bacterial transferase hexapeptide (six repeats) SUTH_02806 PF00258 Flavodoxin SUTH_02808 PF00378 Enoyl-CoA hydratase/isomerase SUTH_02809 PF03061 Thioesterase superfamily SUTH_02810 PF00108 Thiolase, N-terminal domain SUTH_02810 PF02803 Thiolase, C-terminal domain SUTH_02814 PF01625 Peptide methionine sulfoxide reductase SUTH_02815 PF14497 Glutathione S-transferase, C-terminal domain SUTH_02815 PF02798 Glutathione S-transferase, N-terminal domain SUTH_02824 PF00563 EAL domain SUTH_02824 PF03707 Bacterial signalling protein N terminal repeat SUTH_02824 PF00990 Diguanylate cyclase, GGDEF domain SUTH_02825 PF01784 NIF3 (NGG1p interacting factor 3) SUTH_02826 PF17820 PDZ domain SUTH_02826 PF13180 PDZ domain SUTH_02827 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain SUTH_02828 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase SUTH_02828 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg SUTH_02828 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II SUTH_02829 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster SUTH_02829 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region SUTH_02829 PF07992 Pyridine nucleotide-disulphide oxidoreductase SUTH_02830 PF13419 Haloacid dehalogenase-like hydrolase SUTH_02831 PF00072 Response regulator receiver domain SUTH_02832 PF13185 GAF domain SUTH_02832 PF00990 Diguanylate cyclase, GGDEF domain SUTH_02832 PF00563 EAL domain SUTH_02833 PF00902 Sec-independent protein translocase protein (TatC) SUTH_02834 PF02416 mttA/Hcf106 family SUTH_02835 PF02416 mttA/Hcf106 family SUTH_02837 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase SUTH_02838 PF01502 Phosphoribosyl-AMP cyclohydrolase SUTH_02839 PF00977 Histidine biosynthesis protein SUTH_02840 PF00977 Histidine biosynthesis protein SUTH_02841 PF00117 Glutamine amidotransferase class-I SUTH_02842 PF00475 Imidazoleglycerol-phosphate dehydratase SUTH_02843 PF00155 Aminotransferase class I and II SUTH_02845 PF01850 PIN domain SUTH_02847 PF00815 Histidinol dehydrogenase SUTH_02848 PF01634 ATP phosphoribosyltransferase SUTH_02849 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) SUTH_02851 PF01061 ABC-2 type transporter SUTH_02852 PF00005 ABC transporter SUTH_02853 PF13466 STAS domain SUTH_02856 PF02470 MlaD protein SUTH_02857 PF02405 Permease MlaE SUTH_02858 PF00005 ABC transporter SUTH_02859 PF00158 Sigma-54 interaction domain SUTH_02859 PF00072 Response regulator receiver domain SUTH_02859 PF02954 Bacterial regulatory protein, Fis family SUTH_02860 PF01471 Putative peptidoglycan binding domain SUTH_02860 PF13401 AAA domain SUTH_02861 PF00263 Bacterial type II and III secretion system protein SUTH_02861 PF03958 Bacterial type II/III secretion system short domain SUTH_02863 PF00437 Type II/IV secretion system protein SUTH_02864 PF00482 Type II secretion system (T2SS), protein F SUTH_02870 PF00834 Ribulose-phosphate 3 epimerase family SUTH_02871 PF13411 MerR HTH family regulatory protein SUTH_02873 PF01039 Carboxyl transferase domain SUTH_02874 PF02771 Acyl-CoA dehydrogenase, N-terminal domain SUTH_02874 PF00441 Acyl-CoA dehydrogenase, C-terminal domain SUTH_02874 PF02770 Acyl-CoA dehydrogenase, middle domain SUTH_02875 PF00378 Enoyl-CoA hydratase/isomerase SUTH_02876 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain SUTH_02876 PF02785 Biotin carboxylase C-terminal domain SUTH_02876 PF00289 Biotin carboxylase, N-terminal domain SUTH_02876 PF00364 Biotin-requiring enzyme SUTH_02877 PF05853 beta-keto acid cleavage enzyme SUTH_02878 PF13419 Haloacid dehalogenase-like hydrolase SUTH_02879 PF00425 chorismate binding enzyme SUTH_02879 PF04715 Anthranilate synthase component I, N terminal region SUTH_02880 PF00117 Glutamine amidotransferase class-I SUTH_02881 PF00591 Glycosyl transferase family, a/b domain SUTH_02881 PF02885 Glycosyl transferase family, helical bundle domain SUTH_02882 PF00218 Indole-3-glycerol phosphate synthase SUTH_02883 PF00989 PAS fold SUTH_02883 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SUTH_02883 PF00512 His Kinase A (phospho-acceptor) domain SUTH_02885 PF00072 Response regulator receiver domain SUTH_02885 PF00672 HAMP domain SUTH_02885 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SUTH_02885 PF00512 His Kinase A (phospho-acceptor) domain SUTH_02885 PF01627 Hpt domain SUTH_02885 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) SUTH_02887 PF00873 AcrB/AcrD/AcrF family SUTH_02888 PF07992 Pyridine nucleotide-disulphide oxidoreductase SUTH_02889 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion SUTH_02890 PF13442 Cytochrome C oxidase, cbb3-type, subunit III SUTH_02891 PF01627 Hpt domain SUTH_02891 PF00672 HAMP domain SUTH_02891 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SUTH_02891 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) SUTH_02891 PF00072 Response regulator receiver domain SUTH_02891 PF00512 His Kinase A (phospho-acceptor) domain SUTH_02892 PF00072 Response regulator receiver domain SUTH_02893 PF00072 Response regulator receiver domain SUTH_02896 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain SUTH_02896 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain SUTH_02897 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component SUTH_02897 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component SUTH_02899 PF03480 Bacterial extracellular solute-binding protein, family 7 SUTH_02900 PF00392 Bacterial regulatory proteins, gntR family SUTH_02900 PF07729 FCD domain SUTH_02901 PF03741 Integral membrane protein TerC family SUTH_02905 PF01979 Amidohydrolase family SUTH_02906 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases SUTH_02907 PF02021 Uncharacterised protein family UPF0102 SUTH_02909 PF13580 SIS domain SUTH_02910 PF04972 BON domain SUTH_02911 PF01467 Cytidylyltransferase-like SUTH_02914 PF07963 Prokaryotic N-terminal methylation motif SUTH_02914 PF00114 Pilin (bacterial filament) SUTH_02919 PF05567 Neisseria PilC beta-propeller domain SUTH_02919 PF05567 Neisseria PilC beta-propeller domain SUTH_02920 PF00436 Single-strand binding protein family SUTH_02921 PF07690 Major Facilitator Superfamily SUTH_02922 PF17760 UvrA interaction domain SUTH_02922 PF17755 UvrA DNA-binding domain SUTH_02924 PF01569 PAP2 superfamily SUTH_02925 PF02233 NAD(P) transhydrogenase beta subunit SUTH_02926 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch SUTH_02926 PF05222 Alanine dehydrogenase/PNT, N-terminal domain SUTH_02926 PF01262 Alanine dehydrogenase/PNT, C-terminal domain SUTH_02927 PF01544 CorA-like Mg2+ transporter protein SUTH_02929 PF13193 AMP-binding enzyme C-terminal domain SUTH_02929 PF00501 AMP-binding enzyme SUTH_02931 PF13183 4Fe-4S dicluster domain SUTH_02931 PF02754 Cysteine-rich domain SUTH_02932 PF01565 FAD binding domain SUTH_02933 PF02913 FAD linked oxidases, C-terminal domain SUTH_02933 PF01565 FAD binding domain SUTH_02934 PF05161 MOFRL family SUTH_02934 PF13660 Domain of unknown function (DUF4147) SUTH_02935 PF01261 Xylose isomerase-like TIM barrel SUTH_02936 PF01292 Prokaryotic cytochrome b561 SUTH_02938 PF04264 YceI-like domain SUTH_02943 PF00111 2Fe-2S iron-sulfur cluster binding domain SUTH_02943 PF00970 Oxidoreductase FAD-binding domain SUTH_02943 PF00175 Oxidoreductase NAD-binding domain SUTH_02944 PF03707 Bacterial signalling protein N terminal repeat SUTH_02944 PF00563 EAL domain SUTH_02944 PF00990 Diguanylate cyclase, GGDEF domain SUTH_02945 PF01070 FMN-dependent dehydrogenase SUTH_02948 PF05598 Transposase domain (DUF772) SUTH_02948 PF01609 Transposase DDE domain SUTH_02951 PF01850 PIN domain SUTH_02952 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin SUTH_02953 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit SUTH_02954 PF00374 Nickel-dependent hydrogenase SUTH_02954 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit SUTH_02954 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit SUTH_02955 PF00361 Proton-conducting membrane transporter SUTH_02957 PF00146 NADH dehydrogenase SUTH_02958 PF00361 Proton-conducting membrane transporter SUTH_02959 PF00916 Sulfate permease family SUTH_02959 PF01740 STAS domain SUTH_02960 PF01923 Cobalamin adenosyltransferase SUTH_02961 PF00990 Diguanylate cyclase, GGDEF domain SUTH_02965 PF01040 UbiA prenyltransferase family SUTH_02967 PF00793 DAHP synthetase I family SUTH_02968 PF17200 Single Cache domain 2 SUTH_02968 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SUTH_02968 PF00672 HAMP domain SUTH_02970 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II SUTH_02970 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg SUTH_02971 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain SUTH_02972 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster SUTH_02972 PF07992 Pyridine nucleotide-disulphide oxidoreductase SUTH_02973 PF00072 Response regulator receiver domain SUTH_02973 PF00990 Diguanylate cyclase, GGDEF domain SUTH_02974 PF04055 Radical SAM superfamily SUTH_02977 PF00501 AMP-binding enzyme SUTH_02977 PF13193 AMP-binding enzyme C-terminal domain SUTH_02978 PF00676 Dehydrogenase E1 component SUTH_02979 PF00364 Biotin-requiring enzyme SUTH_02979 PF02779 Transketolase, pyrimidine binding domain SUTH_02979 PF02780 Transketolase, C-terminal domain SUTH_02980 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) SUTH_02980 PF00364 Biotin-requiring enzyme SUTH_02980 PF02817 e3 binding domain SUTH_02981 PF00550 Phosphopantetheine attachment site SUTH_02984 PF08240 Alcohol dehydrogenase GroES-like domain SUTH_02985 PF13654 AAA domain SUTH_02985 PF05362 Lon protease (S16) C-terminal proteolytic domain SUTH_02986 PF04358 DsrC like protein SUTH_02989 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain SUTH_02989 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain SUTH_02990 PF00731 AIR carboxylase SUTH_02991 PF01218 Coproporphyrinogen III oxidase SUTH_02993 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase SUTH_02994 PF02602 Uroporphyrinogen-III synthase HemD SUTH_02995 PF03900 Porphobilinogen deaminase, C-terminal domain SUTH_02995 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain SUTH_02996 PF00311 Phosphoenolpyruvate carboxylase SUTH_02997 PF00768 D-alanyl-D-alanine carboxypeptidase SUTH_02999 PF00390 Malic enzyme, N-terminal domain SUTH_02999 PF03949 Malic enzyme, NAD binding domain SUTH_02999 PF01515 Phosphate acetyl/butaryl transferase SUTH_03000 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain SUTH_03000 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain SUTH_03001 PF00155 Aminotransferase class I and II SUTH_03004 PF01510 N-acetylmuramoyl-L-alanine amidase SUTH_03005 PF02954 Bacterial regulatory protein, Fis family SUTH_03005 PF00158 Sigma-54 interaction domain SUTH_03005 PF00072 Response regulator receiver domain SUTH_03006 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SUTH_03006 PF00512 His Kinase A (phospho-acceptor) domain SUTH_03009 PF00348 Polyprenyl synthetase SUTH_03010 PF04397 LytTr DNA-binding domain SUTH_03010 PF00072 Response regulator receiver domain SUTH_03011 PF07694 5TMR of 5TMR-LYT SUTH_03011 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SUTH_03011 PF13492 GAF domain SUTH_03011 PF06580 Histidine kinase SUTH_03012 PF14698 Argininosuccinate lyase C-terminal SUTH_03012 PF00206 Lyase SUTH_03013 PF03793 PASTA domain SUTH_03013 PF00069 Protein kinase domain SUTH_03015 PF00462 Glutaredoxin SUTH_03016 PF00174 Oxidoreductase molybdopterin binding domain SUTH_03017 PF01794 Ferric reductase like transmembrane component SUTH_03018 PF03551 Transcriptional regulator PadR-like family SUTH_03018 PF13847 Methyltransferase domain SUTH_03019 PF04379 ApaG domain SUTH_03020 PF00211 Adenylate and Guanylate cyclase catalytic domain SUTH_03023 PF02080 TrkA-C domain SUTH_03023 PF02254 TrkA-N domain SUTH_03023 PF00999 Sodium/hydrogen exchanger family SUTH_03024 PF01380 SIS domain SUTH_03024 PF00571 CBS domain SUTH_03027 PF03968 OstA-like protein SUTH_03028 PF00378 Enoyl-CoA hydratase/isomerase SUTH_03030 PF00155 Aminotransferase class I and II SUTH_03031 PF00990 Diguanylate cyclase, GGDEF domain SUTH_03031 PF05230 MASE2 domain SUTH_03032 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase SUTH_03033 PF00990 Diguanylate cyclase, GGDEF domain SUTH_03033 PF03707 Bacterial signalling protein N terminal repeat SUTH_03033 PF00563 EAL domain SUTH_03034 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase SUTH_03034 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase SUTH_03035 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase SUTH_03035 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase SUTH_03037 PF00360 Phytochrome region SUTH_03037 PF00990 Diguanylate cyclase, GGDEF domain SUTH_03037 PF01590 GAF domain SUTH_03037 PF00563 EAL domain SUTH_03038 PF01960 ArgJ family SUTH_03041 PF03710 Glutamate-ammonia ligase adenylyltransferase SUTH_03041 PF08335 GlnD PII-uridylyltransferase SUTH_03042 PF13502 AsmA-like C-terminal region SUTH_03042 PF13116 Protein of unknown function SUTH_03043 PF00795 Carbon-nitrogen hydrolase SUTH_03044 PF01523 Putative modulator of DNA gyrase SUTH_03045 PF00072 Response regulator receiver domain SUTH_03045 PF00990 Diguanylate cyclase, GGDEF domain SUTH_03046 PF18146 Damage-inducible protein CinA KH domain SUTH_03046 PF00994 Probable molybdopterin binding domain SUTH_03046 PF02464 Competence-damaged protein SUTH_03048 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold SUTH_03048 PF00271 Helicase conserved C-terminal domain SUTH_03048 PF04408 Helicase associated domain (HA2) SUTH_03048 PF11898 Domain of unknown function (DUF3418) SUTH_03048 PF00270 DEAD/DEAH box helicase SUTH_03049 PF02537 CrcB-like protein, Camphor Resistance (CrcB) SUTH_03050 PF00749 tRNA synthetases class I (E and Q), catalytic domain SUTH_03050 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain SUTH_03053 PF13361 UvrD-like helicase C-terminal domain SUTH_03053 PF00580 UvrD/REP helicase N-terminal domain SUTH_03055 PF00563 EAL domain SUTH_03055 PF00990 Diguanylate cyclase, GGDEF domain SUTH_03055 PF03707 Bacterial signalling protein N terminal repeat SUTH_03057 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain SUTH_03058 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SUTH_03058 PF00497 Bacterial extracellular solute-binding proteins, family 3 SUTH_03058 PF00072 Response regulator receiver domain SUTH_03058 PF00512 His Kinase A (phospho-acceptor) domain SUTH_03058 PF01627 Hpt domain SUTH_03060 PF00596 Class II Aldolase and Adducin N-terminal domain SUTH_03061 PF01008 Initiation factor 2 subunit family SUTH_03062 PF07516 SecA Wing and Scaffold domain SUTH_03062 PF07517 SecA DEAD-like domain SUTH_03062 PF01043 SecA preprotein cross-linking domain SUTH_03062 PF02810 SEC-C motif SUTH_03063 PF01551 Peptidase family M23 SUTH_03063 PF01476 LysM domain SUTH_03063 PF08525 Opacity-associated protein A N-terminal motif SUTH_03066 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase SUTH_03067 PF12327 FtsZ family, C-terminal domain SUTH_03067 PF00091 Tubulin/FtsZ family, GTPase domain SUTH_03068 PF02491 SHS2 domain inserted in FTSA SUTH_03069 PF08478 POTRA domain, FtsQ-type SUTH_03069 PF03799 Cell division protein FtsQ SUTH_03070 PF07478 D-ala D-ala ligase C-terminus SUTH_03070 PF01820 D-ala D-ala ligase N-terminus SUTH_03071 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain SUTH_03071 PF01565 FAD binding domain SUTH_03072 PF08245 Mur ligase middle domain SUTH_03072 PF02875 Mur ligase family, glutamate ligase domain SUTH_03072 PF01225 Mur ligase family, catalytic domain SUTH_03073 PF04101 Glycosyltransferase family 28 C-terminal domain SUTH_03073 PF03033 Glycosyltransferase family 28 N-terminal domain SUTH_03074 PF01098 Cell cycle protein SUTH_03075 PF08245 Mur ligase middle domain SUTH_03076 PF00953 Glycosyl transferase family 4 SUTH_03076 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 SUTH_03077 PF08245 Mur ligase middle domain SUTH_03077 PF02875 Mur ligase family, glutamate ligase domain SUTH_03077 PF01225 Mur ligase family, catalytic domain SUTH_03078 PF08245 Mur ligase middle domain SUTH_03078 PF02875 Mur ligase family, glutamate ligase domain SUTH_03078 PF01225 Mur ligase family, catalytic domain SUTH_03079 PF00905 Penicillin binding protein transpeptidase domain SUTH_03079 PF03717 Penicillin-binding Protein dimerisation domain SUTH_03081 PF01795 MraW methylase family SUTH_03082 PF02381 MraZ protein, putative antitoxin-like SUTH_03083 PF02666 Phosphatidylserine decarboxylase SUTH_03084 PF00999 Sodium/hydrogen exchanger family SUTH_03085 PF01435 Peptidase family M48 SUTH_03086 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SUTH_03086 PF03466 LysR substrate binding domain SUTH_03091 PF00999 Sodium/hydrogen exchanger family SUTH_03091 PF02254 TrkA-N domain SUTH_03091 PF02080 TrkA-C domain SUTH_03092 PF16916 Dimerisation domain of Zinc Transporter SUTH_03092 PF01545 Cation efflux family SUTH_03093 PF00689 Cation transporting ATPase, C-terminus SUTH_03093 PF00690 Cation transporter/ATPase, N-terminus SUTH_03094 PF00990 Diguanylate cyclase, GGDEF domain SUTH_03094 PF03707 Bacterial signalling protein N terminal repeat SUTH_03094 PF00563 EAL domain SUTH_03097 PF02589 LUD domain SUTH_03097 PF13183 4Fe-4S dicluster domain SUTH_03097 PF11870 Domain of unknown function (DUF3390) SUTH_03098 PF02754 Cysteine-rich domain SUTH_03099 PF01614 Bacterial transcriptional regulator SUTH_03099 PF09339 IclR helix-turn-helix domain SUTH_03100 PF00829 Ribosomal prokaryotic L21 protein SUTH_03101 PF01016 Ribosomal L27 protein SUTH_03102 PF01926 50S ribosome-binding GTPase SUTH_03102 PF01018 GTP1/OBG SUTH_03103 PF01472 PUA domain SUTH_03103 PF00696 Amino acid kinase family SUTH_03104 PF01850 PIN domain SUTH_03107 PF13609 Gram-negative porin SUTH_03115 PF01479 S4 domain SUTH_03115 PF00579 tRNA synthetases class I (W and Y) SUTH_03116 PF01551 Peptidase family M23 SUTH_03117 PF03702 Anhydro-N-acetylmuramic acid kinase SUTH_03118 PF01521 Iron-sulphur cluster biosynthesis SUTH_03121 PF02774 Semialdehyde dehydrogenase, dimerisation domain SUTH_03121 PF01118 Semialdehyde dehydrogenase, NAD binding domain SUTH_03122 PF00380 Ribosomal protein S9/S16 SUTH_03123 PF00572 Ribosomal protein L13 SUTH_03125 PF06508 Queuosine biosynthesis protein QueC SUTH_03127 PF04055 Radical SAM superfamily SUTH_03127 PF01938 TRAM domain SUTH_03127 PF00919 Uncharacterized protein family UPF0004 SUTH_03128 PF02562 PhoH-like protein SUTH_03129 PF02130 Uncharacterized protein family UPF0054 SUTH_03130 PF03471 Transporter associated domain SUTH_03130 PF00571 CBS domain SUTH_03131 PF00795 Carbon-nitrogen hydrolase SUTH_03133 PF02091 Glycyl-tRNA synthetase alpha subunit SUTH_03134 PF02092 Glycyl-tRNA synthetase beta subunit SUTH_03134 PF05746 DALR anticodon binding domain SUTH_03139 PF05598 Transposase domain (DUF772) SUTH_03139 PF01609 Transposase DDE domain SUTH_03140 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily SUTH_03142 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase SUTH_03143 PF01980 tRNA-methyltransferase O SUTH_03147 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase SUTH_03148 PF00072 Response regulator receiver domain SUTH_03148 PF09456 RcsC Alpha-Beta-Loop (ABL) SUTH_03148 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SUTH_03148 PF00512 His Kinase A (phospho-acceptor) domain SUTH_03149 PF01040 UbiA prenyltransferase family SUTH_03150 PF00486 Transcriptional regulatory protein, C terminal SUTH_03150 PF00072 Response regulator receiver domain SUTH_03151 PF00512 His Kinase A (phospho-acceptor) domain SUTH_03151 PF08521 Two-component sensor kinase N-terminal SUTH_03151 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SUTH_03154 PF00916 Sulfate permease family SUTH_03154 PF01740 STAS domain SUTH_03156 PF00691 OmpA family SUTH_03157 PF00271 Helicase conserved C-terminal domain SUTH_03157 PF17191 RecG wedge domain SUTH_03157 PF00270 DEAD/DEAH box helicase SUTH_03158 PF01042 Endoribonuclease L-PSP SUTH_03159 PF02623 FliW protein SUTH_03162 PF01053 Cys/Met metabolism PLP-dependent enzyme SUTH_03163 PF02698 DUF218 domain SUTH_03164 PF00994 Probable molybdopterin binding domain SUTH_03165 PF00005 ABC transporter SUTH_03167 PF00883 Cytosol aminopeptidase family, catalytic domain SUTH_03167 PF02789 Cytosol aminopeptidase family, N-terminal domain SUTH_03168 PF00303 Thymidylate synthase SUTH_03169 PF02685 Glucokinase SUTH_03171 PF02806 Alpha amylase, C-terminal all-beta domain SUTH_03171 PF00128 Alpha amylase, catalytic domain SUTH_03171 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) SUTH_03172 PF00483 Nucleotidyl transferase SUTH_03174 PF09094 Domain of unknown function (DUF1925) SUTH_03174 PF09095 Domain of unknown function (DUF1926) SUTH_03174 PF03065 Glycosyl hydrolase family 57 SUTH_03175 PF11897 Protein of unknown function (DUF3417) SUTH_03175 PF00343 Carbohydrate phosphorylase SUTH_03176 PF00342 Phosphoglucose isomerase SUTH_03177 PF00534 Glycosyl transferases group 1 SUTH_03177 PF08323 Starch synthase catalytic domain SUTH_03178 PF00186 Dihydrofolate reductase SUTH_03180 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain SUTH_03180 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain SUTH_03180 PF01276 Orn/Lys/Arg decarboxylase, major domain SUTH_03181 PF00692 dUTPase SUTH_03183 PF00202 Aminotransferase class-III SUTH_03184 PF00155 Aminotransferase class I and II SUTH_03185 PF10609 NUBPL iron-transfer P-loop NTPase SUTH_03188 PF00672 HAMP domain SUTH_03188 PF01627 Hpt domain SUTH_03188 PF00072 Response regulator receiver domain SUTH_03188 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SUTH_03188 PF17149 Periplasmic sensor domain found in signal transduction proteins SUTH_03188 PF00512 His Kinase A (phospho-acceptor) domain SUTH_03191 PF09334 tRNA synthetases class I (M) SUTH_03191 PF01588 Putative tRNA binding domain SUTH_03191 PF08264 Anticodon-binding domain of tRNA SUTH_03192 PF00708 Acylphosphatase SUTH_03193 PF00578 AhpC/TSA family SUTH_03193 PF10417 C-terminal domain of 1-Cys peroxiredoxin SUTH_03196 PF00211 Adenylate and Guanylate cyclase catalytic domain SUTH_03205 PF03061 Thioesterase superfamily SUTH_03207 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SUTH_03207 PF08447 PAS fold SUTH_03207 PF13426 PAS domain SUTH_03209 PF07733 Bacterial DNA polymerase III alpha NTPase domain SUTH_03209 PF17657 Bacterial DNA polymerase III alpha subunit finger domain SUTH_03209 PF14579 Helix-hairpin-helix motif SUTH_03209 PF02811 PHP domain SUTH_03209 PF01336 OB-fold nucleic acid binding domain SUTH_03212 PF08240 Alcohol dehydrogenase GroES-like domain SUTH_03212 PF00107 Zinc-binding dehydrogenase SUTH_03213 PF00390 Malic enzyme, N-terminal domain SUTH_03213 PF01515 Phosphate acetyl/butaryl transferase SUTH_03213 PF03949 Malic enzyme, NAD binding domain SUTH_03214 PF03707 Bacterial signalling protein N terminal repeat SUTH_03214 PF00990 Diguanylate cyclase, GGDEF domain SUTH_03214 PF00563 EAL domain SUTH_03215 PF00072 Response regulator receiver domain SUTH_03215 PF00196 Bacterial regulatory proteins, luxR family SUTH_03216 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SUTH_03216 PF07730 Histidine kinase SUTH_03216 PF05231 MASE1 SUTH_03217 PF00142 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family SUTH_03224 PF00561 alpha/beta hydrolase fold SUTH_03226 PF07669 Eco57I restriction-modification methylase SUTH_03227 PF00580 UvrD/REP helicase N-terminal domain SUTH_03227 PF13361 UvrD-like helicase C-terminal domain SUTH_03230 PF08264 Anticodon-binding domain of tRNA SUTH_03230 PF00133 tRNA synthetases class I (I, L, M and V) SUTH_03230 PF09334 tRNA synthetases class I (M) SUTH_03230 PF13603 Leucyl-tRNA synthetase, Domain 2 SUTH_03232 PF14840 Processivity clamp loader gamma complex DNA pol III C-term SUTH_03232 PF06144 DNA polymerase III, delta subunit SUTH_03233 PF00171 Aldehyde dehydrogenase family SUTH_03234 PF17151 Periplasmic sensor domain SUTH_03234 PF00990 Diguanylate cyclase, GGDEF domain SUTH_03237 PF02515 CoA-transferase family III SUTH_03239 PF00990 Diguanylate cyclase, GGDEF domain SUTH_03239 PF03707 Bacterial signalling protein N terminal repeat SUTH_03239 PF00563 EAL domain SUTH_03240 PF01740 STAS domain SUTH_03240 PF00916 Sulfate permease family SUTH_03241 PF16868 NMT1-like family SUTH_03244 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain SUTH_03244 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain SUTH_03245 PF02899 Phage integrase, N-terminal SAM-like domain SUTH_03245 PF00589 Phage integrase family SUTH_03248 PF03458 UPF0126 domain SUTH_03250 PF02660 Glycerol-3-phosphate acyltransferase SUTH_03253 PF00814 Glycoprotease family SUTH_03262 PF00905 Penicillin binding protein transpeptidase domain SUTH_03262 PF00912 Transglycosylase SUTH_03263 PF01165 Ribosomal protein S21 SUTH_03265 PF01807 CHC2 zinc finger SUTH_03265 PF10410 DnaB-helicase binding domain of primase SUTH_03265 PF08278 DNA primase DnaG DnaB-binding SUTH_03265 PF08275 DNA primase catalytic core, N-terminal domain SUTH_03266 PF04546 Sigma-70, non-essential region SUTH_03266 PF04545 Sigma-70, region 4 SUTH_03266 PF00140 Sigma-70 factor, region 1.2 SUTH_03266 PF03979 Sigma-70 factor, region 1.1 SUTH_03266 PF04539 Sigma-70 region 3 SUTH_03266 PF04542 Sigma-70 region 2 SUTH_03269 PF01734 Patatin-like phospholipase SUTH_03273 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain SUTH_03273 PF05221 S-adenosyl-L-homocysteine hydrolase SUTH_03274 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV SUTH_03275 PF02219 Methylenetetrahydrofolate reductase SUTH_03276 PF13426 PAS domain SUTH_03276 PF08448 PAS fold SUTH_03276 PF00072 Response regulator receiver domain SUTH_03276 PF00512 His Kinase A (phospho-acceptor) domain SUTH_03276 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SUTH_03280 PF05872 Bacterial protein of unknown function (DUF853) SUTH_03281 PF01709 Transcriptional regulator SUTH_03282 PF00293 NUDIX domain SUTH_03282 PF13344 Haloacid dehalogenase-like hydrolase SUTH_03283 PF00578 AhpC/TSA family SUTH_03285 PF02075 Crossover junction endodeoxyribonuclease RuvC SUTH_03287 PF07499 RuvA, C-terminal domain SUTH_03287 PF01330 RuvA N terminal domain SUTH_03288 PF17864 RuvB AAA lid domain SUTH_03288 PF05491 RuvB C-terminal winged helix domain SUTH_03288 PF05496 Holliday junction DNA helicase RuvB P-loop domain SUTH_03289 PF08241 Methyltransferase domain SUTH_03292 PF03061 Thioesterase superfamily SUTH_03293 PF01618 MotA/TolQ/ExbB proton channel family SUTH_03294 PF02472 Biopolymer transport protein ExbD/TolR SUTH_03296 PF07676 WD40-like Beta Propeller Repeat SUTH_03296 PF04052 TolB amino-terminal domain SUTH_03297 PF00691 OmpA family SUTH_03299 PF04055 Radical SAM superfamily SUTH_03300 PF13380 CoA binding domain SUTH_03301 PF00749 tRNA synthetases class I (E and Q), catalytic domain SUTH_03302 PF00085 Thioredoxin SUTH_03304 PF06071 Protein of unknown function (DUF933) SUTH_03304 PF01926 50S ribosome-binding GTPase SUTH_03305 PF01195 Peptidyl-tRNA hydrolase SUTH_03306 PF01386 Ribosomal L25p family SUTH_03306 PF14693 Ribosomal protein TL5, C-terminal domain SUTH_03307 PF14572 Phosphoribosyl synthetase-associated domain SUTH_03307 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase SUTH_03309 PF00288 GHMP kinases N terminal domain SUTH_03309 PF08544 GHMP kinases C terminal SUTH_03310 PF03550 Outer membrane lipoprotein LolB SUTH_03312 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain SUTH_03312 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain SUTH_03312 PF06827 Zinc finger found in FPG and IleRS SUTH_03313 PF00037 4Fe-4S binding domain SUTH_03314 PF01467 Cytidylyltransferase-like SUTH_03316 PF05193 Peptidase M16 inactive domain SUTH_03316 PF00675 Insulinase (Peptidase family M16) SUTH_03317 PF05193 Peptidase M16 inactive domain SUTH_03317 PF00675 Insulinase (Peptidase family M16) SUTH_03318 PF02881 SRP54-type protein, helical bundle domain SUTH_03318 PF00448 SRP54-type protein, GTPase domain SUTH_03319 PF00005 ABC transporter SUTH_03320 PF18075 FtsX extracellular domain SUTH_03322 PF00140 Sigma-70 factor, region 1.2 SUTH_03322 PF04542 Sigma-70 region 2 SUTH_03322 PF04545 Sigma-70, region 4 SUTH_03323 PF02630 SCO1/SenC SUTH_03324 PF01040 UbiA prenyltransferase family SUTH_03325 PF02630 SCO1/SenC SUTH_03326 PF00115 Cytochrome C and Quinol oxidase polypeptide I SUTH_03327 PF00116 Cytochrome C oxidase subunit II, periplasmic domain SUTH_03327 PF02790 Cytochrome C oxidase subunit II, transmembrane domain SUTH_03329 PF00510 Cytochrome c oxidase subunit III SUTH_03330 PF00034 Cytochrome c SUTH_03331 PF02875 Mur ligase family, glutamate ligase domain SUTH_03331 PF08245 Mur ligase middle domain SUTH_03331 PF01225 Mur ligase family, catalytic domain SUTH_03333 PF00578 AhpC/TSA family SUTH_03334 PF01220 Dehydroquinase class II SUTH_03335 PF00364 Biotin-requiring enzyme SUTH_03336 PF00289 Biotin carboxylase, N-terminal domain SUTH_03336 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain SUTH_03336 PF02785 Biotin carboxylase C-terminal domain SUTH_03339 PF00294 pfkB family carbohydrate kinase SUTH_03341 PF16363 GDP-mannose 4,6 dehydratase SUTH_03342 PF00149 Calcineurin-like phosphoesterase SUTH_03344 PF02719 Polysaccharide biosynthesis protein SUTH_03345 PF00953 Glycosyl transferase family 4 SUTH_03346 PF00534 Glycosyl transferases group 1 SUTH_03347 PF01370 NAD dependent epimerase/dehydratase family SUTH_03349 PF00535 Glycosyl transferase family 2 SUTH_03350 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family SUTH_03351 PF00483 Nucleotidyl transferase SUTH_03353 PF16363 GDP-mannose 4,6 dehydratase SUTH_03354 PF02310 B12 binding domain SUTH_03354 PF04055 Radical SAM superfamily SUTH_03356 PF02348 Cytidylyltransferase SUTH_03359 PF03328 HpcH/HpaI aldolase/citrate lyase family SUTH_03360 PF13419 Haloacid dehalogenase-like hydrolase SUTH_03361 PF01370 NAD dependent epimerase/dehydratase family SUTH_03362 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain SUTH_03362 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain SUTH_03363 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase SUTH_03365 PF02543 Carbamoyltransferase N-terminus SUTH_03365 PF16861 Carbamoyltransferase C-terminus SUTH_03370 PF02543 Carbamoyltransferase N-terminus SUTH_03370 PF16861 Carbamoyltransferase C-terminus SUTH_03373 PF04055 Radical SAM superfamily SUTH_03373 PF06463 Molybdenum Cofactor Synthesis C SUTH_03375 PF16254 Domain of unknown function (DUF4910) SUTH_03375 PF09940 Domain of unknown function (DUF2172) SUTH_03375 PF16221 winged helix-turn-helix SUTH_03376 PF08666 SAF domain SUTH_03376 PF03102 NeuB family SUTH_03377 PF00535 Glycosyl transferase family 2 SUTH_03377 PF18674 TarS beta-glycosyltransferase C-terminal domain 1 SUTH_03378 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family SUTH_03379 PF00465 Iron-containing alcohol dehydrogenase SUTH_03380 PF00467 KOW motif SUTH_03380 PF02357 Transcription termination factor nusG SUTH_03383 PF01370 NAD dependent epimerase/dehydratase family SUTH_03384 PF00132 Bacterial transferase hexapeptide (six repeats) SUTH_03388 PF01370 NAD dependent epimerase/dehydratase family SUTH_03389 PF16363 GDP-mannose 4,6 dehydratase SUTH_03390 PF01050 Mannose-6-phosphate isomerase SUTH_03390 PF00483 Nucleotidyl transferase SUTH_03392 PF01370 NAD dependent epimerase/dehydratase family SUTH_03393 PF00535 Glycosyl transferase family 2 SUTH_03394 PF01075 Glycosyltransferase family 9 (heptosyltransferase) SUTH_03395 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) SUTH_03395 PF00534 Glycosyl transferases group 1 SUTH_03396 PF02321 Outer membrane efflux protein SUTH_03397 PF00581 Rhodanese-like domain SUTH_03399 PF00873 AcrB/AcrD/AcrF family SUTH_03400 PF13533 Biotin-lipoyl like SUTH_03401 PF08362 YcdC-like protein, C-terminal region SUTH_03401 PF00440 Bacterial regulatory proteins, tetR family SUTH_03402 PF00478 IMP dehydrogenase / GMP reductase domain SUTH_03403 PF13472 GDSL-like Lipase/Acylhydrolase family SUTH_03404 PF00194 Eukaryotic-type carbonic anhydrase SUTH_03405 PF01964 Radical SAM ThiC family SUTH_03405 PF13667 ThiC-associated domain SUTH_03406 PF01966 HD domain SUTH_03406 PF11871 Domain of unknown function (DUF3391) SUTH_03407 PF02673 Bacitracin resistance protein BacA SUTH_03408 PF05728 Uncharacterised protein family (UPF0227) SUTH_03409 PF00892 EamA-like transporter family SUTH_03410 PF08241 Methyltransferase domain SUTH_03413 PF18317 Shikimate 5'-dehydrogenase C-terminal domain SUTH_03413 PF01488 Shikimate / quinate 5-dehydrogenase SUTH_03413 PF08501 Shikimate dehydrogenase substrate binding domain SUTH_03414 PF00912 Transglycosylase SUTH_03415 PF01544 CorA-like Mg2+ transporter protein SUTH_03416 PF00893 Small Multidrug Resistance protein SUTH_03417 PF00202 Aminotransferase class-III SUTH_03418 PF02581 Thiamine monophosphate synthase SUTH_03419 PF08543 Phosphomethylpyrimidine kinase SUTH_03420 PF00072 Response regulator receiver domain SUTH_03421 PF00072 Response regulator receiver domain SUTH_03423 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SUTH_03423 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term SUTH_03424 PF01584 CheW-like domain SUTH_03424 PF02895 Signal transducing histidine kinase, homodimeric domain SUTH_03424 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SUTH_03424 PF01627 Hpt domain SUTH_03426 PF00990 Diguanylate cyclase, GGDEF domain SUTH_03426 PF00563 EAL domain SUTH_03426 PF03707 Bacterial signalling protein N terminal repeat SUTH_03427 PF00724 NADH:flavin oxidoreductase / NADH oxidase family SUTH_03431 PF00873 AcrB/AcrD/AcrF family SUTH_03432 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion SUTH_03432 PF00529 HlyD membrane-fusion protein of T1SS SUTH_03433 PF00672 HAMP domain SUTH_03433 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SUTH_03433 PF00512 His Kinase A (phospho-acceptor) domain SUTH_03434 PF00072 Response regulator receiver domain SUTH_03434 PF00486 Transcriptional regulatory protein, C terminal SUTH_03444 PF00289 Biotin carboxylase, N-terminal domain SUTH_03444 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain SUTH_03444 PF02785 Biotin carboxylase C-terminal domain SUTH_03445 PF01039 Carboxyl transferase domain SUTH_03447 PF01642 Methylmalonyl-CoA mutase SUTH_03447 PF02310 B12 binding domain SUTH_03448 PF00392 Bacterial regulatory proteins, gntR family SUTH_03448 PF07729 FCD domain SUTH_03449 PF01738 Dienelactone hydrolase family SUTH_03456 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB SUTH_03456 PF17287 POTRA domain SUTH_03456 PF08479 POTRA domain, ShlB-type SUTH_03458 PF03091 CutA1 divalent ion tolerance protein SUTH_03459 PF02683 Cytochrome C biogenesis protein transmembrane region SUTH_03459 PF11412 Disulphide bond corrector protein DsbC SUTH_03460 PF00677 Lumazine binding domain SUTH_03461 PF00925 GTP cyclohydrolase II SUTH_03461 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase SUTH_03462 PF00885 6,7-dimethyl-8-ribityllumazine synthase SUTH_03463 PF01029 NusB family SUTH_03464 PF00586 AIR synthase related protein, N-terminal domain SUTH_03464 PF02769 AIR synthase related protein, C-terminal domain SUTH_03465 PF04608 Phosphatidylglycerophosphatase A SUTH_03466 PF02464 Competence-damaged protein SUTH_03467 PF00154 recA bacterial DNA recombination protein SUTH_03468 PF02631 RecX family SUTH_03469 PF00005 ABC transporter SUTH_03470 PF04552 Sigma-54, DNA binding domain SUTH_03470 PF04963 Sigma-54 factor, core binding domain SUTH_03470 PF00309 Sigma-54 factor, Activator interacting domain (AID) SUTH_03471 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein SUTH_03472 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 SUTH_03473 PF07475 HPr Serine kinase C-terminal domain SUTH_03473 PF02603 HPr Serine kinase N terminus SUTH_03477 PF00724 NADH:flavin oxidoreductase / NADH oxidase family SUTH_03477 PF07992 Pyridine nucleotide-disulphide oxidoreductase SUTH_03478 PF12728 Helix-turn-helix domain SUTH_03478 PF12727 PBP superfamily domain SUTH_03479 PF00528 Binding-protein-dependent transport system inner membrane component SUTH_03480 PF00005 ABC transporter SUTH_03481 PF12849 PBP superfamily domain SUTH_03482 PF12848 ABC transporter SUTH_03482 PF00005 ABC transporter SUTH_03486 PF00005 ABC transporter SUTH_03486 PF12848 ABC transporter SUTH_03487 PF03976 Polyphosphate kinase 2 (PPK2) SUTH_03488 PF04299 Putative FMN-binding domain SUTH_03492 PF00072 Response regulator receiver domain SUTH_03494 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SUTH_03494 PF03466 LysR substrate binding domain SUTH_03496 PF03061 Thioesterase superfamily SUTH_03498 PF07690 Major Facilitator Superfamily SUTH_03500 PF13495 Phage integrase, N-terminal SAM-like domain SUTH_03500 PF00589 Phage integrase family SUTH_03508 PF00561 alpha/beta hydrolase fold SUTH_03508 PF07021 Methionine biosynthesis protein MetW SUTH_03509 PF00561 alpha/beta hydrolase fold SUTH_03510 PF05524 PEP-utilising enzyme, N-terminal SUTH_03510 PF00391 PEP-utilising enzyme, mobile domain SUTH_03510 PF02896 PEP-utilising enzyme, TIM barrel domain SUTH_03511 PF00381 PTS HPr component phosphorylation site SUTH_03514 PF02424 ApbE family SUTH_03515 PF02951 Prokaryotic glutathione synthetase, N-terminal domain SUTH_03515 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain SUTH_03517 PF03459 TOBE domain SUTH_03517 PF00005 ABC transporter SUTH_03518 PF00528 Binding-protein-dependent transport system inner membrane component SUTH_03520 PF03459 TOBE domain SUTH_03520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SUTH_03522 PF00266 Aminotransferase class-V SUTH_03524 PF03641 Possible lysine decarboxylase SUTH_03525 PF01367 5'-3' exonuclease, C-terminal SAM fold SUTH_03525 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain SUTH_03525 PF01612 3'-5' exonuclease SUTH_03525 PF00476 DNA polymerase family A SUTH_03526 PF00664 ABC transporter transmembrane region SUTH_03526 PF00005 ABC transporter SUTH_03527 PF00534 Glycosyl transferases group 1 SUTH_03527 PF13439 Glycosyltransferase Family 4 SUTH_03530 PF13439 Glycosyltransferase Family 4 SUTH_03530 PF00534 Glycosyl transferases group 1 SUTH_03531 PF00733 Asparagine synthase SUTH_03531 PF13537 Glutamine amidotransferase domain SUTH_03532 PF00206 Lyase SUTH_03534 PF00535 Glycosyl transferase family 2 SUTH_03537 PF00534 Glycosyl transferases group 1 SUTH_03537 PF13579 Glycosyl transferase 4-like domain SUTH_03538 PF00534 Glycosyl transferases group 1 SUTH_03538 PF13439 Glycosyltransferase Family 4 SUTH_03539 PF01075 Glycosyltransferase family 9 (heptosyltransferase) SUTH_03541 PF05164 Cell division protein ZapA SUTH_03542 PF08668 HDOD domain SUTH_03542 PF00563 EAL domain SUTH_03544 PF01925 Sulfite exporter TauE/SafE SUTH_03545 PF02798 Glutathione S-transferase, N-terminal domain SUTH_03545 PF00043 Glutathione S-transferase, C-terminal domain SUTH_03548 PF01553 Acyltransferase SUTH_03549 PF00501 AMP-binding enzyme SUTH_03549 PF13193 AMP-binding enzyme C-terminal domain SUTH_03550 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component SUTH_03552 PF03480 Bacterial extracellular solute-binding protein, family 7 SUTH_03554 PF00392 Bacterial regulatory proteins, gntR family SUTH_03554 PF07729 FCD domain SUTH_03555 PF13419 Haloacid dehalogenase-like hydrolase SUTH_03558 PF01266 FAD dependent oxidoreductase SUTH_03559 PF00378 Enoyl-CoA hydratase/isomerase SUTH_03563 PF03707 Bacterial signalling protein N terminal repeat SUTH_03563 PF00990 Diguanylate cyclase, GGDEF domain SUTH_03563 PF00563 EAL domain SUTH_03566 PF02574 Homocysteine S-methyltransferase SUTH_03566 PF00809 Pterin binding enzyme SUTH_03566 PF02607 B12 binding domain SUTH_03566 PF02965 Vitamin B12 dependent methionine synthase, activation domain SUTH_03566 PF02310 B12 binding domain SUTH_03572 PF01743 Poly A polymerase head domain SUTH_03572 PF12627 Probable RNA and SrmB- binding site of polymerase A SUTH_03572 PF01966 HD domain SUTH_03574 PF14718 Soluble lytic murein transglycosylase L domain SUTH_03574 PF01464 Transglycosylase SLT domain SUTH_03575 PF01812 5-formyltetrahydrofolate cyclo-ligase family SUTH_03576 PF00563 EAL domain SUTH_03576 PF08668 HDOD domain SUTH_03577 PF03707 Bacterial signalling protein N terminal repeat SUTH_03577 PF00563 EAL domain SUTH_03577 PF00990 Diguanylate cyclase, GGDEF domain SUTH_03578 PF00155 Aminotransferase class I and II SUTH_03597 PF00211 Adenylate and Guanylate cyclase catalytic domain SUTH_03598 PF00585 C-terminal regulatory domain of Threonine dehydratase SUTH_03598 PF00291 Pyridoxal-phosphate dependent enzyme SUTH_03600 PF01554 MatE SUTH_03602 PF04536 TPM domain SUTH_03607 PF00512 His Kinase A (phospho-acceptor) domain SUTH_03607 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SUTH_03607 PF11808 Phosphate regulon sensor protein PhoR SUTH_03607 PF00989 PAS fold SUTH_03608 PF00072 Response regulator receiver domain SUTH_03608 PF00486 Transcriptional regulatory protein, C terminal SUTH_03610 PF01209 ubiE/COQ5 methyltransferase family SUTH_03615 PF02321 Outer membrane efflux protein SUTH_03616 PF00873 AcrB/AcrD/AcrF family SUTH_03617 PF00529 HlyD membrane-fusion protein of T1SS SUTH_03617 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion SUTH_03618 PF00440 Bacterial regulatory proteins, tetR family SUTH_03619 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain SUTH_03619 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain SUTH_03620 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain SUTH_03620 PF02874 ATP synthase alpha/beta family, beta-barrel domain SUTH_03621 PF00231 ATP synthase SUTH_03622 PF00306 ATP synthase alpha/beta chain, C terminal domain SUTH_03622 PF02874 ATP synthase alpha/beta family, beta-barrel domain SUTH_03622 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain SUTH_03623 PF00213 ATP synthase delta (OSCP) subunit SUTH_03624 PF00430 ATP synthase B/B' CF(0) SUTH_03625 PF00137 ATP synthase subunit C SUTH_03626 PF00119 ATP synthase A chain SUTH_03628 PF17762 HTH domain found in ParB protein SUTH_03628 PF02195 ParB-like nuclease domain SUTH_03629 PF13614 AAA domain SUTH_03630 PF02527 rRNA small subunit methyltransferase G SUTH_03631 PF01134 Glucose inhibited division protein A SUTH_03631 PF13932 GidA associated domain SUTH_03632 PF01925 Sulfite exporter TauE/SafE SUTH_03633 PF10396 GTP-binding protein TrmE N-terminus SUTH_03633 PF12631 MnmE helical domain SUTH_03633 PF01926 50S ribosome-binding GTPase SUTH_03634 PF14849 YidC periplasmic domain SUTH_03634 PF02096 60Kd inner membrane protein SUTH_03635 PF01809 Putative membrane protein insertion efficiency factor SUTH_03636 PF00825 Ribonuclease P SUTH_03637 PF00468 Ribosomal protein L34