SUTH_00001 PF00308 Bacterial dnaA protein SUTH_00001 PF08299 Bacterial dnaA protein helix-turn-helix SUTH_00001 PF11638 DnaA N-terminal domain SUTH_00002 PF00712 DNA polymerase III beta subunit, N-terminal domain SUTH_00002 PF02767 DNA polymerase III beta subunit, central domain SUTH_00002 PF02768 DNA polymerase III beta subunit, C-terminal domain SUTH_00003 PF00204 DNA gyrase B SUTH_00003 PF00986 DNA gyrase B subunit, carboxyl terminus SUTH_00003 PF01751 Toprim domain SUTH_00003 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SUTH_00004 PF01464 Transglycosylase SLT domain SUTH_00006 PF00270 DEAD/DEAH box helicase SUTH_00006 PF00271 Helicase conserved C-terminal domain SUTH_00006 PF03880 DbpA RNA binding domain SUTH_00007 PF07209 SUTH_00007 SUTH_00008 PF00472 RF-1 domain SUTH_00010 PF08843 Nucleotidyl transferase of unknown function (DUF1814) SUTH_00011 PF11459 SUTH_00011 SUTH_00011 PF17194 SUTH_00011 SUTH_00012 PF02661 Fic/DOC family SUTH_00015 PF04654 SUTH_00015 SUTH_00020 PF00145 C-5 cytosine-specific DNA methylase SUTH_00021 PF03852 DNA mismatch endonuclease Vsr SUTH_00021 PF04480 Protein of unknown function (DUF559) SUTH_00022 PF10979 SUTH_00022 SUTH_00026 PF00909 Ammonium Transporter Family SUTH_00027 PF03562 MltA specific insert domain SUTH_00027 PF06725 3D domain SUTH_00028 PF05673 Protein of unknown function (DUF815) SUTH_00029 PF00293 NUDIX domain SUTH_00029 PF02581 Thiamine monophosphate synthase/TENI SUTH_00030 PF07072 Protein of unknown function (DUF1342) SUTH_00031 PF01121 Dephospho-CoA kinase SUTH_00033 PF00291 Pyridoxal-phosphate dependent enzyme SUTH_00034 PF02675 S-adenosylmethionine decarboxylase SUTH_00035 PF13450 NAD(P)-binding Rossmann-like domain SUTH_00036 PF01564 Spermine/spermidine synthase SUTH_00037 PF00656 Caspase domain SUTH_00038 PF00656 Caspase domain SUTH_00039 PF01850 PIN domain SUTH_00040 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system SUTH_00041 PF00656 Caspase domain SUTH_00043 PF13785 SUTH_00043 SUTH_00044 PF13421 SUTH_00044 SUTH_00045 PF03994 SUTH_00045 SUTH_00046 PF00441 Acyl-CoA dehydrogenase, C-terminal domain SUTH_00046 PF02770 Acyl-CoA dehydrogenase, middle domain SUTH_00046 PF02771 Acyl-CoA dehydrogenase, N-terminal domain SUTH_00047 PF00027 Cyclic nucleotide-binding domain SUTH_00048 PF03309 Type III pantothenate kinase SUTH_00049 PF02237 Biotin protein ligase C terminal domain SUTH_00049 PF03099 Biotin/lipoate A/B protein ligase family SUTH_00050 PF00072 Response regulator receiver domain SUTH_00050 PF00158 Sigma-54 interaction domain SUTH_00050 PF02954 Bacterial regulatory protein, Fis family SUTH_00051 PF00512 His Kinase A (phospho-acceptor) domain SUTH_00051 PF00989 PAS fold SUTH_00051 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SUTH_00052 PF13511 SUTH_00052 SUTH_00053 PF00120 Glutamine synthetase, catalytic domain SUTH_00053 PF03951 Glutamine synthetase, beta-Grasp domain SUTH_00054 PF01545 Cation efflux family SUTH_00054 PF16916 SUTH_00054 SUTH_00055 PF00581 Rhodanese-like domain SUTH_00056 PF02445 Quinolinate synthetase A protein SUTH_00057 PF08668 HDOD domain SUTH_00058 PF02624 YcaO-like family SUTH_00059 PF03372 Endonuclease/Exonuclease/phosphatase family SUTH_00060 PF13091 PLD-like domain SUTH_00061 PF00656 Caspase domain SUTH_00061 PF13098 Thioredoxin-like domain SUTH_00062 PF00005 ABC transporter SUTH_00063 PF00528 Binding-protein-dependent transport system inner membrane component SUTH_00064 PF00528 Binding-protein-dependent transport system inner membrane component SUTH_00065 PF00497 Bacterial extracellular solute-binding proteins, family 3 SUTH_00066 PF00005 ABC transporter SUTH_00066 PF00664 ABC transporter transmembrane region SUTH_00068 PF13173 AAA domain SUTH_00068 PF13635 SUTH_00068 SUTH_00069 PF01594 SUTH_00069 SUTH_00070 PF00440 Bacterial regulatory proteins, tetR family SUTH_00071 PF00108 Thiolase, N-terminal domain SUTH_00071 PF02803 Thiolase, C-terminal domain SUTH_00072 PF01575 MaoC like domain SUTH_00073 PF00378 Enoyl-CoA hydratase/isomerase family SUTH_00073 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain SUTH_00073 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain SUTH_00074 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system SUTH_00075 PF13470 SUTH_00075 SUTH_00076 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain SUTH_00076 PF12833 Helix-turn-helix domain SUTH_00077 PF00892 EamA-like transporter family SUTH_00078 PF03061 Thioesterase superfamily SUTH_00079 PF07027 SUTH_00079 SUTH_00080 PF00438 S-adenosylmethionine synthetase, N-terminal domain SUTH_00080 PF02772 S-adenosylmethionine synthetase, central domain SUTH_00080 PF02773 S-adenosylmethionine synthetase, C-terminal domain SUTH_00081 PF00107 Zinc-binding dehydrogenase SUTH_00081 PF08240 Alcohol dehydrogenase GroES-like domain SUTH_00082 PF00877 NlpC/P60 family SUTH_00083 PF00881 Nitroreductase family SUTH_00085 PF00440 Bacterial regulatory proteins, tetR family SUTH_00086 PF00378 Enoyl-CoA hydratase/isomerase family SUTH_00087 PF01841 Transglutaminase-like superfamily SUTH_00088 PF00441 Acyl-CoA dehydrogenase, C-terminal domain SUTH_00088 PF02770 Acyl-CoA dehydrogenase, middle domain SUTH_00089 PF00441 Acyl-CoA dehydrogenase, C-terminal domain SUTH_00089 PF02770 Acyl-CoA dehydrogenase, middle domain SUTH_00089 PF02771 Acyl-CoA dehydrogenase, N-terminal domain SUTH_00090 PF00108 Thiolase, N-terminal domain SUTH_00090 PF02803 Thiolase, C-terminal domain SUTH_00091 PF00378 Enoyl-CoA hydratase/isomerase family SUTH_00091 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain SUTH_00091 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain SUTH_00092 PF02653 SUTH_00092 SUTH_00093 PF02653 SUTH_00093 SUTH_00094 PF00005 ABC transporter SUTH_00094 PF12399 Branched-chain amino acid ATP-binding cassette transporter SUTH_00095 PF00005 ABC transporter SUTH_00096 PF00501 AMP-binding enzyme SUTH_00097 PF13458 Periplasmic binding protein SUTH_00100 PF13671 AAA domain SUTH_00101 PF00440 Bacterial regulatory proteins, tetR family SUTH_00102 PF12697 Alpha/beta hydrolase family SUTH_00103 PF00583 Acetyltransferase (GNAT) family SUTH_00104 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SUTH_00104 PF03466 LysR substrate binding domain SUTH_00105 PF02915 Rubrerythrin SUTH_00106 PF02754 SUTH_00106 SUTH_00107 PF12007 Protein of unknown function (DUF3501) SUTH_00108 PF01136 SUTH_00108 SUTH_00109 PF01136 SUTH_00109 SUTH_00110 PF02036 SCP-2 sterol transfer family SUTH_00111 PF00270 DEAD/DEAH box helicase SUTH_00111 PF00271 Helicase conserved C-terminal domain SUTH_00112 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SUTH_00112 PF00672 HAMP domain SUTH_00112 PF12729 SUTH_00112 SUTH_00113 PF06041 Bacterial protein of unknown function (DUF924) SUTH_00114 PF01131 DNA topoisomerase SUTH_00114 PF01751 Toprim domain SUTH_00114 PF13342 SUTH_00114 SUTH_00115 PF04361 SUTH_00115 SUTH_00116 PF02481 DNA recombination-mediator protein A SUTH_00117 PF01476 LysM domain SUTH_00118 PF01327 Polypeptide deformylase SUTH_00119 PF00551 Formyl transferase SUTH_00119 PF02911 Formyl transferase, C-terminal domain SUTH_00120 PF00656 Caspase domain SUTH_00120 PF03572 Peptidase family S41 SUTH_00120 PF13180 PDZ domain SUTH_00121 PF04055 Radical SAM superfamily SUTH_00121 PF13353 4Fe-4S single cluster domain SUTH_00122 PF04014 Antidote-toxin recognition MazE SUTH_00123 PF01850 PIN domain SUTH_00125 PF01029 NusB family SUTH_00125 PF01189 NOL1/NOP2/sun family SUTH_00126 PF14334 SUTH_00126 SUTH_00127 PF00512 His Kinase A (phospho-acceptor) domain SUTH_00127 PF00672 HAMP domain SUTH_00127 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SUTH_00128 PF00072 Response regulator receiver domain SUTH_00128 PF02954 Bacterial regulatory protein, Fis family SUTH_00128 PF14532 Sigma-54 interaction domain SUTH_00129 PF02080 TrkA-C domain SUTH_00129 PF02254 TrkA-N domain SUTH_00130 PF02386 Cation transport protein SUTH_00131 PF01208 Uroporphyrinogen decarboxylase (URO-D) SUTH_00132 PF00270 DEAD/DEAH box helicase SUTH_00133 PF01609 Transposase DDE domain SUTH_00133 PF05598 SUTH_00133 SUTH_00134 PF07690 Major Facilitator Superfamily SUTH_00135 PF03473 MOSC domain SUTH_00136 PF00480 ROK family SUTH_00137 PF05170 SUTH_00137 SUTH_00139 PF00122 E1-E2 ATPase SUTH_00139 PF00689 Cation transporting ATPase, C-terminus SUTH_00139 PF00690 Cation transporter/ATPase, N-terminus SUTH_00139 PF00702 haloacid dehalogenase-like hydrolase SUTH_00141 PF01510 N-acetylmuramoyl-L-alanine amidase SUTH_00143 PF01612 3'-5' exonuclease SUTH_00143 PF04539 Sigma-70 region 3 SUTH_00143 PF04542 Sigma-70 region 2 SUTH_00143 PF04545 Sigma-70, region 4 SUTH_00144 PF03591 SUTH_00144 SUTH_00145 PF05437 SUTH_00145 SUTH_00146 PF13487 HD domain SUTH_00147 PF00589 Phage integrase family SUTH_00147 PF02899 Phage integrase, N-terminal SAM-like domain SUTH_00148 PF04340 Protein of unknown function, DUF484 SUTH_00149 PF01678 Diaminopimelate epimerase SUTH_00150 PF03279 SUTH_00150 SUTH_00151 PF03279 SUTH_00151 SUTH_00152 PF03279 SUTH_00152 SUTH_00153 PF01408 Oxidoreductase family, NAD-binding Rossmann fold SUTH_00154 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family SUTH_00155 PF00132 Bacterial transferase hexapeptide (six repeats) SUTH_00155 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 SUTH_00156 PF07362 Post-segregation antitoxin CcdA SUTH_00157 PF01845 CcdB protein SUTH_00159 PF01464 Transglycosylase SLT domain SUTH_00160 PF07690 Major Facilitator Superfamily SUTH_00161 PF00438 S-adenosylmethionine synthetase, N-terminal domain SUTH_00161 PF02772 S-adenosylmethionine synthetase, central domain SUTH_00161 PF02773 S-adenosylmethionine synthetase, C-terminal domain SUTH_00162 PF09996 Uncharacterized protein conserved in bacteria (DUF2237) SUTH_00163 PF00255 Glutathione peroxidase SUTH_00164 PF08212 Lipocalin-like domain SUTH_00167 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family SUTH_00168 PF00501 AMP-binding enzyme SUTH_00168 PF16177 SUTH_00168 SUTH_00169 PF01613 Flavin reductase like domain SUTH_00170 PF08861 SUTH_00170 SUTH_00171 PF07298 SUTH_00171 SUTH_00172 PF02678 Pirin SUTH_00172 PF05726 Pirin C-terminal cupin domain SUTH_00173 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SUTH_00174 PF00166 Chaperonin 10 Kd subunit SUTH_00175 PF00118 TCP-1/cpn60 chaperonin family SUTH_00177 PF00072 Response regulator receiver domain SUTH_00177 PF00486 Transcriptional regulatory protein, C terminal SUTH_00178 PF00512 His Kinase A (phospho-acceptor) domain SUTH_00178 PF00672 HAMP domain SUTH_00178 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SUTH_00178 PF08521 SUTH_00178 SUTH_00179 PF13937 SUTH_00179 SUTH_00180 PF00474 Sodium:solute symporter family SUTH_00181 PF13432 Tetratricopeptide repeat SUTH_00183 PF00069 Protein kinase domain SUTH_00184 PF00474 Sodium:solute symporter family SUTH_00185 PF04341 SUTH_00185 SUTH_00187 PF00899 ThiF family SUTH_00188 PF13561 Enoyl-(Acyl carrier protein) reductase SUTH_00189 PF01171 PP-loop family SUTH_00191 PF01467 Cytidylyltransferase SUTH_00192 PF02410 Oligomerisation domain SUTH_00193 PF02590 Predicted SPOUT methyltransferase SUTH_00194 PF02545 Maf-like protein SUTH_00195 PF10150 Ribonuclease E/G family SUTH_00198 PF12804 MobA-like NTP transferase domain SUTH_00199 PF13453 SUTH_00199 SUTH_00200 PF02635 DsrE/DsrF-like family SUTH_00201 PF01597 Glycine cleavage H-protein SUTH_00202 PF00080 Copper/zinc superoxide dismutase (SODC) SUTH_00203 PF00009 Elongation factor Tu GTP binding domain SUTH_00203 PF09106 Elongation factor SelB, winged helix SUTH_00203 PF09107 Elongation factor SelB, winged helix SUTH_00204 PF01841 Transglutaminase-like superfamily SUTH_00205 PF00578 AhpC/TSA family SUTH_00206 PF03841 L-seryl-tRNA selenium transferase SUTH_00206 PF12390 SUTH_00206 SUTH_00207 PF04982 SUTH_00207 SUTH_00210 PF04216 Protein involved in formate dehydrogenase formation SUTH_00211 PF01292 Prokaryotic cytochrome b561 SUTH_00212 PF09163 Formate dehydrogenase N, transmembrane SUTH_00212 PF13247 4Fe-4S dicluster domain SUTH_00213 PF00384 Molybdopterin oxidoreductase SUTH_00213 PF01568 Molydopterin dinucleotide binding domain SUTH_00214 PF00384 Molybdopterin oxidoreductase SUTH_00214 PF04879 Molybdopterin oxidoreductase Fe4S4 domain SUTH_00215 PF00072 Response regulator receiver domain SUTH_00215 PF00158 Sigma-54 interaction domain SUTH_00215 PF02954 Bacterial regulatory protein, Fis family SUTH_00216 PF00512 His Kinase A (phospho-acceptor) domain SUTH_00216 PF00672 HAMP domain SUTH_00216 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SUTH_00216 PF17202 SUTH_00216 SUTH_00217 PF10411 Disulfide bond isomerase protein N-terminus SUTH_00217 PF13098 Thioredoxin-like domain SUTH_00218 PF01494 FAD binding domain SUTH_00221 PF14076 SUTH_00221 SUTH_00222 PF01381 Helix-turn-helix SUTH_00224 PF13997 SUTH_00224 SUTH_00225 PF07332 SUTH_00225 SUTH_00226 PF05957 SUTH_00226 SUTH_00227 PF03372 Endonuclease/Exonuclease/phosphatase family SUTH_00228 PF00156 Phosphoribosyl transferase domain SUTH_00230 PF02637 GatB domain SUTH_00230 PF02934 GatB/GatE catalytic domain SUTH_00231 PF01425 Amidase SUTH_00232 PF02686 Glu-tRNAGln amidotransferase C subunit SUTH_00233 PF06723 MreB/Mbl protein SUTH_00234 PF04085 rod shape-determining protein MreC SUTH_00235 PF04093 SUTH_00235 SUTH_00236 PF00905 Penicillin binding protein transpeptidase domain SUTH_00236 PF03717 Penicillin-binding Protein dimerisation domain SUTH_00237 PF01098 SUTH_00237 SUTH_00238 PF03330 Rare lipoprotein A (RlpA)-like double-psi beta-barrel SUTH_00238 PF05036 Sporulation related domain SUTH_00239 PF00768 D-alanyl-D-alanine carboxypeptidase SUTH_00239 PF07943 Penicillin-binding protein 5, C-terminal domain SUTH_00240 PF01063 Aminotransferase class IV SUTH_00241 PF04359 Protein of unknown function (DUF493) SUTH_00242 PF03099 Biotin/lipoate A/B protein ligase family SUTH_00243 PF04055 Radical SAM superfamily SUTH_00244 PF01553 Acyltransferase SUTH_00244 PF07690 Major Facilitator Superfamily SUTH_00245 PF13443 Cro/C1-type HTH DNA-binding domain SUTH_00247 PF00400 WD domain, G-beta repeat SUTH_00247 PF00656 Caspase domain SUTH_00248 PF00027 Cyclic nucleotide-binding domain SUTH_00248 PF00939 Sodium:sulfate symporter transmembrane region SUTH_00249 PF04392 ABC transporter substrate binding protein SUTH_00250 PF00501 AMP-binding enzyme SUTH_00250 PF13193 AMP-binding enzyme C-terminal domain SUTH_00251 PF13852 SUTH_00251 SUTH_00253 PF00580 UvrD/REP helicase N-terminal domain SUTH_00253 PF13361 UvrD-like helicase C-terminal domain SUTH_00254 PF13442 Cytochrome C oxidase, cbb3-type, subunit III SUTH_00256 PF00875 DNA photolyase SUTH_00256 PF03441 FAD binding domain of DNA photolyase SUTH_00257 PF02622 Uncharacterized ACR, COG1678 SUTH_00258 PF03652 Uncharacterised protein family (UPF0081) SUTH_00259 PF00156 Phosphoribosyl transferase domain SUTH_00260 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain SUTH_00260 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain SUTH_00261 PF01979 Amidohydrolase family SUTH_00262 PF00270 DEAD/DEAH box helicase SUTH_00262 PF00271 Helicase conserved C-terminal domain SUTH_00263 PF02594 Uncharacterised ACR, YggU family COG1872 SUTH_00264 PF02325 SUTH_00264 SUTH_00265 PF03807 NADP oxidoreductase coenzyme F420-dependent SUTH_00265 PF14748 Pyrroline-5-carboxylate reductase dimerisation SUTH_00266 PF01168 Alanine racemase, N-terminal domain SUTH_00267 PF00437 Type II/IV secretion system protein SUTH_00268 PF00437 Type II/IV secretion system protein SUTH_00269 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SUTH_00269 PF13682 Chemoreceptor zinc-binding domain SUTH_00270 PF08447 PAS fold SUTH_00271 PF01170 Putative RNA methylase family UPF0020 SUTH_00271 PF02926 THUMP domain SUTH_00272 PF03653 SUTH_00272 SUTH_00273 PF13460 NADH(P)-binding SUTH_00274 PF00111 2Fe-2S iron-sulfur cluster binding domain SUTH_00274 PF00175 Oxidoreductase NAD-binding domain SUTH_00274 PF00970 Oxidoreductase FAD-binding domain SUTH_00275 PF00005 ABC transporter SUTH_00276 PF00005 ABC transporter SUTH_00276 PF12399 Branched-chain amino acid ATP-binding cassette transporter SUTH_00277 PF02653 SUTH_00277 SUTH_00278 PF02653 SUTH_00278 SUTH_00279 PF13458 Periplasmic binding protein SUTH_00280 PF00034 Cytochrome c SUTH_00281 PF03190 Protein of unknown function, DUF255 SUTH_00283 PF00072 Response regulator receiver domain SUTH_00285 PF02635 DsrE/DsrF-like family SUTH_00286 PF00581 Rhodanese-like domain SUTH_00287 PF04143 SUTH_00287 SUTH_00288 PF13442 Cytochrome C oxidase, cbb3-type, subunit III SUTH_00289 PF01292 Prokaryotic cytochrome b561 SUTH_00290 PF11783 Cytochrome c bacterial SUTH_00290 PF13435 Cytochrome c554 and c-prime SUTH_00291 PF00920 Dehydratase family SUTH_00293 PF01790 SUTH_00293 SUTH_00294 PF00106 short chain dehydrogenase SUTH_00295 PF01323 DSBA-like thioredoxin domain SUTH_00296 PF05036 Sporulation related domain SUTH_00297 PF00750 tRNA synthetases class I (R) SUTH_00297 PF03485 Arginyl tRNA synthetase N terminal domain SUTH_00297 PF05746 DALR anticodon binding domain SUTH_00298 PF03109 SUTH_00298 SUTH_00299 PF00474 Sodium:solute symporter family SUTH_00300 PF13365 Trypsin-like peptidase domain SUTH_00301 PF04892 SUTH_00301 SUTH_00302 PF12643 SUTH_00302 SUTH_00303 PF01257 Thioredoxin-like [2Fe-2S] ferredoxin SUTH_00304 PF00975 Thioesterase domain SUTH_00305 PF00005 ABC transporter SUTH_00307 PF09907 SUTH_00307 SUTH_00309 PF01061 SUTH_00309 SUTH_00310 PF02597 ThiS family SUTH_00311 PF05690 Thiazole biosynthesis protein ThiG SUTH_00313 PF02390 Putative methyltransferase SUTH_00314 PF00990 GGDEF domain SUTH_00315 PF05940 SUTH_00315 SUTH_00316 PF04055 Radical SAM superfamily SUTH_00316 PF06969 HemN C-terminal domain SUTH_00317 PF01725 Ham1 family SUTH_00318 PF01138 3' exoribonuclease family, domain 1 SUTH_00318 PF03725 3' exoribonuclease family, domain 2 SUTH_00319 PF13672 Protein phosphatase 2C SUTH_00320 PF00069 Protein kinase domain SUTH_00321 PF03755 SUTH_00321 SUTH_00321 PF08340 SUTH_00321 SUTH_00323 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SUTH_00323 PF12729 SUTH_00323 SUTH_00324 PF01584 CheW-like domain SUTH_00326 PF00551 Formyl transferase SUTH_00327 PF12710 haloacid dehalogenase-like hydrolase SUTH_00328 PF03061 Thioesterase superfamily SUTH_00329 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain SUTH_00329 PF01488 Shikimate / quinate 5-dehydrogenase SUTH_00329 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain SUTH_00330 PF01553 Acyltransferase SUTH_00331 PF00472 RF-1 domain SUTH_00331 PF03462 PCRF domain SUTH_00332 PF05175 Methyltransferase small domain SUTH_00333 PF01814 Hemerythrin HHE cation binding domain SUTH_00334 PF00034 Cytochrome c SUTH_00335 PF01926 50S ribosome-binding GTPase SUTH_00336 PF00490 Delta-aminolevulinic acid dehydratase SUTH_00337 PF00440 Bacterial regulatory proteins, tetR family SUTH_00338 PF00696 Amino acid kinase family SUTH_00339 PF00011 Hsp20/alpha crystallin family SUTH_00340 PF00293 NUDIX domain SUTH_00341 PF01337 Barstar (barnase inhibitor) SUTH_00342 PF00545 ribonuclease SUTH_00343 PF00152 tRNA synthetases class II (D, K and N) SUTH_00343 PF01336 OB-fold nucleic acid binding domain SUTH_00343 PF02938 GAD domain SUTH_00344 PF04367 SUTH_00344 SUTH_00345 PF09723 SUTH_00345 SUTH_00346 PF01478 Type IV leader peptidase family SUTH_00346 PF06750 SUTH_00346 SUTH_00347 PF00482 Type II secretion system (T2SS), protein F SUTH_00348 PF00571 CBS domain SUTH_00348 PF01595 SUTH_00348 SUTH_00348 PF03471 Transporter associated domain SUTH_00349 PF01578 SUTH_00349 SUTH_00350 PF00448 SRP54-type protein, GTPase domain SUTH_00350 PF02881 SRP54-type protein, helical bundle domain SUTH_00350 PF02978 Signal peptide binding domain SUTH_00351 PF01464 Transglycosylase SLT domain SUTH_00352 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) SUTH_00352 PF03129 Anticodon binding domain SUTH_00352 PF04073 Aminoacyl-tRNA editing domain SUTH_00353 PF00293 NUDIX domain SUTH_00354 PF08750 SUTH_00354 SUTH_00355 PF03232 SUTH_00355 SUTH_00356 PF02566 OsmC-like protein SUTH_00361 PF00892 EamA-like transporter family SUTH_00362 PF00005 ABC transporter SUTH_00363 PF03379 SUTH_00363 SUTH_00364 PF01578 SUTH_00364 SUTH_00365 PF04995 SUTH_00365 SUTH_00366 PF03100 CcmE SUTH_00367 PF01578 SUTH_00367 SUTH_00367 PF16327 SUTH_00367 SUTH_00368 PF08534 Redoxin SUTH_00369 PF03918 Cytochrome C biogenesis protein SUTH_00371 PF03927 NapD protein SUTH_00372 PF00384 Molybdopterin oxidoreductase SUTH_00372 PF01568 Molydopterin dinucleotide binding domain SUTH_00372 PF04879 Molybdopterin oxidoreductase Fe4S4 domain SUTH_00373 PF12838 4Fe-4S dicluster domain SUTH_00374 PF12801 SUTH_00374 SUTH_00375 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) SUTH_00376 PF00037 4Fe-4S binding domain SUTH_00376 PF13187 4Fe-4S dicluster domain SUTH_00378 PF01545 Cation efflux family SUTH_00379 PF03595 Voltage-dependent anion channel SUTH_00380 PF00440 Bacterial regulatory proteins, tetR family SUTH_00382 PF16576 SUTH_00382 SUTH_00383 PF12704 MacB-like periplasmic core domain SUTH_00384 PF00005 ABC transporter SUTH_00386 PF12840 Helix-turn-helix domain SUTH_00387 PF01451 Low molecular weight phosphotyrosine protein phosphatase SUTH_00388 PF01758 Sodium Bile acid symporter family SUTH_00389 PF03773 SUTH_00389 SUTH_00390 PF13192 Thioredoxin domain SUTH_00391 PF02566 OsmC-like protein SUTH_00392 PF14340 SUTH_00392 SUTH_00393 PF00072 Response regulator receiver domain SUTH_00393 PF00563 EAL domain SUTH_00393 PF00989 PAS fold SUTH_00393 PF00990 GGDEF domain SUTH_00393 PF08448 PAS fold SUTH_00393 PF13426 PAS domain SUTH_00394 PF00563 EAL domain SUTH_00394 PF00672 HAMP domain SUTH_00394 PF00990 GGDEF domain SUTH_00394 PF08376 Nitrate and nitrite sensing SUTH_00394 PF13426 PAS domain SUTH_00395 PF00581 Rhodanese-like domain SUTH_00396 PF04542 Sigma-70 region 2 SUTH_00396 PF08281 Sigma-70, region 4 SUTH_00397 PF00108 Thiolase, N-terminal domain SUTH_00398 PF00108 Thiolase, N-terminal domain SUTH_00399 PF02803 Thiolase, C-terminal domain SUTH_00400 PF13192 Thioredoxin domain SUTH_00401 PF03773 SUTH_00401 SUTH_00402 PF00085 Thioredoxin SUTH_00403 PF02683 SUTH_00403 SUTH_00404 PF00108 Thiolase, N-terminal domain SUTH_00404 PF02803 Thiolase, C-terminal domain SUTH_00408 PF13467 Ribbon-helix-helix domain SUTH_00409 PF04143 SUTH_00409 SUTH_00410 PF04143 SUTH_00410 SUTH_00411 PF01206 Sulfurtransferase TusA SUTH_00418 PF00581 Rhodanese-like domain SUTH_00421 PF12838 4Fe-4S dicluster domain SUTH_00421 PF13187 4Fe-4S dicluster domain SUTH_00425 PF02613 Nitrate reductase delta subunit SUTH_00426 PF00384 Molybdopterin oxidoreductase SUTH_00426 PF01568 Molydopterin dinucleotide binding domain SUTH_00426 PF04879 Molybdopterin oxidoreductase Fe4S4 domain SUTH_00426 PF10518 TAT (twin-arginine translocation) pathway signal sequence SUTH_00427 PF03916 SUTH_00427 SUTH_00428 PF12800 4Fe-4S binding domain SUTH_00428 PF13247 4Fe-4S dicluster domain SUTH_00429 PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein SUTH_00430 PF00512 His Kinase A (phospho-acceptor) domain SUTH_00430 PF00672 HAMP domain SUTH_00430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SUTH_00431 PF00072 Response regulator receiver domain SUTH_00431 PF00158 Sigma-54 interaction domain SUTH_00431 PF02954 Bacterial regulatory protein, Fis family SUTH_00432 PF01209 ubiE/COQ5 methyltransferase family SUTH_00434 PF00072 Response regulator receiver domain SUTH_00434 PF00158 Sigma-54 interaction domain SUTH_00434 PF02954 Bacterial regulatory protein, Fis family SUTH_00435 PF00512 His Kinase A (phospho-acceptor) domain SUTH_00435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SUTH_00436 PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein SUTH_00437 PF00384 Molybdopterin oxidoreductase SUTH_00437 PF01568 Molydopterin dinucleotide binding domain SUTH_00437 PF04879 Molybdopterin oxidoreductase Fe4S4 domain SUTH_00438 PF00037 4Fe-4S binding domain SUTH_00438 PF13247 4Fe-4S dicluster domain SUTH_00439 PF02613 Nitrate reductase delta subunit SUTH_00440 PF01209 ubiE/COQ5 methyltransferase family SUTH_00441 PF00034 Cytochrome c SUTH_00444 PF00512 His Kinase A (phospho-acceptor) domain SUTH_00444 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SUTH_00444 PF14827 Sensory domain of two-component sensor kinase SUTH_00445 PF00072 Response regulator receiver domain SUTH_00445 PF00158 Sigma-54 interaction domain SUTH_00445 PF02954 Bacterial regulatory protein, Fis family SUTH_00447 PF00034 Cytochrome c SUTH_00450 PF11943 SUTH_00450 SUTH_00451 PF02824 TGS domain SUTH_00451 PF04607 Region found in RelA / SpoT proteins SUTH_00451 PF13291 ACT domain SUTH_00451 PF13328 HD domain SUTH_00452 PF01192 RNA polymerase Rpb6 SUTH_00453 PF00625 Guanylate kinase SUTH_00454 PF04314 Protein of unknown function (DUF461) SUTH_00456 PF07690 Major Facilitator Superfamily SUTH_00461 PF04972 BON domain SUTH_00462 PF00583 Acetyltransferase (GNAT) family SUTH_00462 PF13380 CoA binding domain SUTH_00462 PF13549 ATP-grasp domain SUTH_00462 PF13607 Succinyl-CoA ligase like flavodoxin domain SUTH_00463 PF04014 Antidote-toxin recognition MazE SUTH_00464 PF01850 PIN domain SUTH_00466 PF05016 Plasmid stabilisation system protein SUTH_00467 PF08843 Nucleotidyl transferase of unknown function (DUF1814) SUTH_00470 PF00753 Metallo-beta-lactamase superfamily SUTH_00471 PF01078 Magnesium chelatase, subunit ChlI SUTH_00471 PF13335 SUTH_00471 SUTH_00472 PF08722 TnsA endonuclease N terminal SUTH_00473 PF00665 Integrase core domain SUTH_00473 PF09299 Mu transposase, C-terminal SUTH_00474 PF05621 SUTH_00474 SUTH_00479 PF01609 Transposase DDE domain SUTH_00479 PF14294 SUTH_00479 SUTH_00480 PF10442 SUTH_00480 SUTH_00483 PF00899 ThiF family SUTH_00483 PF14457 SUTH_00483 SUTH_00483 PF14464 Prokaryotic homologs of the JAB domain SUTH_00485 PF16473 SUTH_00485 SUTH_00488 PF00004 ATPase family associated with various cellular activities (AAA) SUTH_00489 PF01381 Helix-turn-helix SUTH_00490 PF09994 Uncharacterized alpha/beta hydrolase domain (DUF2235) SUTH_00491 PF03265 SUTH_00491 SUTH_00492 PF00512 His Kinase A (phospho-acceptor) domain SUTH_00492 PF00672 HAMP domain SUTH_00492 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SUTH_00493 PF00072 Response regulator receiver domain SUTH_00493 PF00486 Transcriptional regulatory protein, C terminal SUTH_00494 PF07813 LTXXQ motif family protein SUTH_00496 PF13202 EF hand SUTH_00496 PF13499 EF-hand domain pair SUTH_00497 PF02687 SUTH_00497 SUTH_00497 PF12704 MacB-like periplasmic core domain SUTH_00498 PF00005 ABC transporter SUTH_00499 PF16576 SUTH_00499 SUTH_00500 PF02321 Outer membrane efflux protein SUTH_00502 PF12802 MarR family SUTH_00504 PF00884 Sulfatase SUTH_00506 PF00884 Sulfatase SUTH_00507 PF00501 AMP-binding enzyme SUTH_00507 PF13193 AMP-binding enzyme C-terminal domain SUTH_00509 PF00884 Sulfatase SUTH_00510 PF06980 SUTH_00510 SUTH_00511 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SUTH_00511 PF03466 LysR substrate binding domain SUTH_00512 PF12228 SUTH_00512 SUTH_00513 PF07690 Major Facilitator Superfamily SUTH_00514 PF00732 GMC oxidoreductase SUTH_00514 PF05199 GMC oxidoreductase SUTH_00515 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain SUTH_00516 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain SUTH_00517 PF04055 Radical SAM superfamily SUTH_00517 PF13186 Iron-sulfur cluster-binding domain SUTH_00522 PF01078 Magnesium chelatase, subunit ChlI SUTH_00522 PF13541 Subunit ChlI of Mg-chelatase SUTH_00523 PF04380 SUTH_00523 SUTH_00524 PF09694 SUTH_00524 SUTH_00525 PF00543 Nitrogen regulatory protein P-II SUTH_00526 PF00909 Ammonium Transporter Family SUTH_00527 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SUTH_00527 PF13682 Chemoreceptor zinc-binding domain SUTH_00528 PF13470 SUTH_00528 SUTH_00529 PF00561 alpha/beta hydrolase fold SUTH_00529 PF07167 SUTH_00529 SUTH_00530 PF00753 Metallo-beta-lactamase superfamily SUTH_00531 PF13411 MerR HTH family regulatory protein SUTH_00532 PF03061 Thioesterase superfamily SUTH_00533 PF00441 Acyl-CoA dehydrogenase, C-terminal domain SUTH_00533 PF02770 Acyl-CoA dehydrogenase, middle domain SUTH_00533 PF02771 Acyl-CoA dehydrogenase, N-terminal domain SUTH_00534 PF03061 Thioesterase superfamily SUTH_00535 PF13279 Thioesterase-like superfamily SUTH_00536 PF00484 Carbonic anhydrase SUTH_00536 PF00583 Acetyltransferase (GNAT) family SUTH_00537 PF00108 Thiolase, N-terminal domain SUTH_00537 PF02803 Thiolase, C-terminal domain SUTH_00538 PF00378 Enoyl-CoA hydratase/isomerase family SUTH_00539 PF00441 Acyl-CoA dehydrogenase, C-terminal domain SUTH_00539 PF02770 Acyl-CoA dehydrogenase, middle domain SUTH_00539 PF02771 Acyl-CoA dehydrogenase, N-terminal domain SUTH_00540 PF09957 SUTH_00540 SUTH_00542 PF01323 DSBA-like thioredoxin domain SUTH_00543 PF01039 Carboxyl transferase domain SUTH_00544 PF00378 Enoyl-CoA hydratase/isomerase family SUTH_00545 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain SUTH_00545 PF00364 Biotin-requiring enzyme SUTH_00545 PF02785 Biotin carboxylase C-terminal domain SUTH_00545 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain SUTH_00546 PF00682 HMGL-like SUTH_00547 PF06945 SUTH_00547 SUTH_00548 PF00753 Metallo-beta-lactamase superfamily SUTH_00550 PF03668 SUTH_00550 SUTH_00551 PF07009 Protein of unknown function (DUF1312) SUTH_00552 PF07456 SUTH_00552 SUTH_00553 PF02190 ATP-dependent protease La (LON) domain SUTH_00554 PF00730 HhH-GPD superfamily base excision DNA repair protein SUTH_00554 PF10576 Iron-sulfur binding domain of endonuclease III SUTH_00554 PF14815 NUDIX domain SUTH_00555 PF02222 ATP-grasp domain SUTH_00556 PF01613 Flavin reductase like domain SUTH_00557 PF00892 EamA-like transporter family SUTH_00559 PF13462 Thioredoxin SUTH_00560 PF12770 SUTH_00560 SUTH_00560 PF13424 Tetratricopeptide repeat SUTH_00561 PF09916 SUTH_00561 SUTH_00562 PF00656 Caspase domain SUTH_00562 PF13360 PQQ-like domain SUTH_00564 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SUTH_00564 PF03466 LysR substrate binding domain SUTH_00565 PF10672 S-adenosylmethionine-dependent methyltransferase SUTH_00566 PF07669 Eco57I restriction-modification methylase SUTH_00567 PF06616 BsuBI/PstI restriction endonuclease C-terminus SUTH_00570 PF01297 Periplasmic solute binding protein family SUTH_00571 PF00950 SUTH_00571 SUTH_00573 PF00227 Proteasome subunit SUTH_00574 PF00004 ATPase family associated with various cellular activities (AAA) SUTH_00574 PF07724 AAA domain (Cdc48 subfamily) SUTH_00575 PF03547 SUTH_00575 SUTH_00576 PF00656 Caspase domain SUTH_00576 PF03781 Sulfatase-modifying factor enzyme 1 SUTH_00577 PF00656 Caspase domain SUTH_00577 PF03781 Sulfatase-modifying factor enzyme 1 SUTH_00578 PF00656 Caspase domain SUTH_00578 PF13180 PDZ domain SUTH_00579 PF00656 Caspase domain SUTH_00580 PF00873 AcrB/AcrD/AcrF family SUTH_00581 PF16576 SUTH_00581 SUTH_00582 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain SUTH_00582 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain SUTH_00583 PF01491 Frataxin-like domain SUTH_00584 PF00905 Penicillin binding protein transpeptidase domain SUTH_00584 PF00912 Transglycosylase SUTH_00584 PF17092 SUTH_00584 SUTH_00585 PF11104 Type IV pilus assembly protein PilM; SUTH_00586 PF05137 SUTH_00586 SUTH_00587 PF04350 Pilus assembly protein, PilO SUTH_00588 PF04351 Pilus assembly protein, PilP SUTH_00589 PF00263 SUTH_00589 SUTH_00589 PF03958 Bacterial type II/III secretion system short domain SUTH_00589 PF11741 AMIN domain SUTH_00590 PF01202 Shikimate kinase SUTH_00591 PF01761 3-dehydroquinate synthase SUTH_00592 PF01966 HD domain SUTH_00592 PF13286 Phosphohydrolase-associated domain SUTH_00593 PF00310 Glutamine amidotransferases class-II SUTH_00593 PF01493 GXGXG motif SUTH_00593 PF01645 Conserved region in glutamate synthase SUTH_00593 PF04898 Glutamate synthase central domain SUTH_00594 PF07992 Pyridine nucleotide-disulphide oxidoreductase SUTH_00594 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster SUTH_00595 PF00132 Bacterial transferase hexapeptide (six repeats) SUTH_00595 PF12804 MobA-like NTP transferase domain SUTH_00596 PF01380 SIS domain SUTH_00596 PF13522 Glutamine amidotransferase domain SUTH_00597 PF02310 B12 binding domain SUTH_00597 PF04055 Radical SAM superfamily SUTH_00598 PF04304 SUTH_00598 SUTH_00599 PF00009 Elongation factor Tu GTP binding domain SUTH_00599 PF00679 Elongation factor G C-terminus SUTH_00599 PF03764 Elongation factor G, domain IV SUTH_00599 PF14492 Elongation Factor G, domain II SUTH_00600 PF00122 E1-E2 ATPase SUTH_00600 PF00702 haloacid dehalogenase-like hydrolase SUTH_00600 PF04945 YHS domain SUTH_00601 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family SUTH_00602 PF11666 SUTH_00602 SUTH_00604 PF04214 SUTH_00604 SUTH_00606 PF00873 AcrB/AcrD/AcrF family SUTH_00607 PF13437 HlyD family secretion protein SUTH_00609 PF02321 Outer membrane efflux protein SUTH_00610 PF00072 Response regulator receiver domain SUTH_00610 PF00486 Transcriptional regulatory protein, C terminal SUTH_00611 PF00512 His Kinase A (phospho-acceptor) domain SUTH_00611 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SUTH_00612 PF11604 Copper binding periplasmic protein CusF SUTH_00613 PF02321 Outer membrane efflux protein SUTH_00614 PF00873 AcrB/AcrD/AcrF family SUTH_00615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SUTH_00615 PF07695 SUTH_00615 SUTH_00615 PF07696 7TMR-DISM extracellular 2 SUTH_00616 PF00072 Response regulator receiver domain SUTH_00616 PF00196 Bacterial regulatory proteins, luxR family SUTH_00619 PF03961 SUTH_00619 SUTH_00620 PF12625 SUTH_00620 SUTH_00620 PF12833 Helix-turn-helix domain SUTH_00621 PF01642 Methylmalonyl-CoA mutase SUTH_00621 PF02310 B12 binding domain SUTH_00621 PF03308 ArgK protein SUTH_00622 PF08972 Domain of unknown function (DUF1902) SUTH_00623 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain SUTH_00623 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain SUTH_00624 PF00027 Cyclic nucleotide-binding domain SUTH_00624 PF13545 Crp-like helix-turn-helix domain SUTH_00625 PF00501 AMP-binding enzyme SUTH_00626 PF00005 ABC transporter SUTH_00626 PF12399 Branched-chain amino acid ATP-binding cassette transporter SUTH_00627 PF02653 SUTH_00627 SUTH_00628 PF02653 SUTH_00628 SUTH_00629 PF13458 Periplasmic binding protein SUTH_00630 PF00005 ABC transporter SUTH_00631 PF00501 AMP-binding enzyme SUTH_00632 PF02515 CoA-transferase family III SUTH_00633 PF03547 SUTH_00633 SUTH_00635 PF00072 Response regulator receiver domain SUTH_00635 PF00196 Bacterial regulatory proteins, luxR family SUTH_00637 PF02390 Putative methyltransferase SUTH_00638 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase SUTH_00638 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain SUTH_00639 PF01565 FAD binding domain SUTH_00639 PF02913 FAD linked oxidases, C-terminal domain SUTH_00643 PF00009 Elongation factor Tu GTP binding domain SUTH_00643 PF03143 Elongation factor Tu C-terminal domain SUTH_00643 PF03144 Elongation factor Tu domain 2 SUTH_00645 PF00584 SecE/Sec61-gamma subunits of protein translocation complex SUTH_00646 PF00467 KOW motif SUTH_00646 PF02357 Transcription termination factor nusG SUTH_00647 PF00298 Ribosomal protein L11, RNA binding domain SUTH_00647 PF03946 Ribosomal protein L11, N-terminal domain SUTH_00648 PF00687 Ribosomal protein L1p/L10e family SUTH_00649 PF00466 Ribosomal protein L10 SUTH_00650 PF00542 Ribosomal protein L7/L12 C-terminal domain SUTH_00650 PF16320 SUTH_00650 SUTH_00651 PF00562 RNA polymerase Rpb2, domain 6 SUTH_00651 PF04560 RNA polymerase Rpb2, domain 7 SUTH_00651 PF04561 RNA polymerase Rpb2, domain 2 SUTH_00651 PF04563 RNA polymerase beta subunit SUTH_00651 PF04565 RNA polymerase Rpb2, domain 3 SUTH_00651 PF10385 RNA polymerase beta subunit external 1 domain SUTH_00652 PF00623 RNA polymerase Rpb1, domain 2 SUTH_00652 PF04983 RNA polymerase Rpb1, domain 3 SUTH_00652 PF04997 RNA polymerase Rpb1, domain 1 SUTH_00652 PF04998 RNA polymerase Rpb1, domain 5 SUTH_00652 PF05000 RNA polymerase Rpb1, domain 4 SUTH_00653 PF00164 Ribosomal protein S12/S23 SUTH_00654 PF00177 Ribosomal protein S7p/S5e SUTH_00655 PF00009 Elongation factor Tu GTP binding domain SUTH_00655 PF00679 Elongation factor G C-terminus SUTH_00655 PF03144 Elongation factor Tu domain 2 SUTH_00655 PF03764 Elongation factor G, domain IV SUTH_00655 PF14492 Elongation Factor G, domain II SUTH_00656 PF00009 Elongation factor Tu GTP binding domain SUTH_00656 PF03143 Elongation factor Tu C-terminal domain SUTH_00656 PF03144 Elongation factor Tu domain 2 SUTH_00657 PF00338 Ribosomal protein S10p/S20e SUTH_00658 PF00297 Ribosomal protein L3 SUTH_00659 PF00573 Ribosomal protein L4/L1 family SUTH_00660 PF00276 Ribosomal protein L23 SUTH_00661 PF00181 Ribosomal Proteins L2, RNA binding domain SUTH_00661 PF03947 Ribosomal Proteins L2, C-terminal domain SUTH_00662 PF00203 Ribosomal protein S19 SUTH_00663 PF00237 Ribosomal protein L22p/L17e SUTH_00664 PF00189 Ribosomal protein S3, C-terminal domain SUTH_00664 PF07650 KH domain SUTH_00665 PF00252 Ribosomal protein L16p/L10e SUTH_00666 PF00831 Ribosomal L29 protein SUTH_00667 PF00366 Ribosomal protein S17 SUTH_00668 PF00238 Ribosomal protein L14p/L23e SUTH_00669 PF17136 SUTH_00669 SUTH_00670 PF00281 Ribosomal protein L5 SUTH_00670 PF00673 ribosomal L5P family C-terminus SUTH_00671 PF00253 Ribosomal protein S14p/S29e SUTH_00672 PF00410 Ribosomal protein S8 SUTH_00673 PF00347 Ribosomal protein L6 SUTH_00674 PF00861 Ribosomal L18p/L5e family SUTH_00675 PF00333 Ribosomal protein S5, N-terminal domain SUTH_00675 PF03719 Ribosomal protein S5, C-terminal domain SUTH_00676 PF00327 Ribosomal protein L30p/L7e SUTH_00677 PF00828 Ribosomal protein L18e/L15 SUTH_00678 PF00344 SecY translocase SUTH_00679 PF01176 Translation initiation factor 1A / IF-1 SUTH_00680 PF00416 Ribosomal protein S13/S18 SUTH_00681 PF00411 Ribosomal protein S11 SUTH_00682 PF00163 Ribosomal protein S4/S9 N-terminal domain SUTH_00682 PF01479 S4 domain SUTH_00683 PF01000 RNA polymerase Rpb3/RpoA insert domain SUTH_00683 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain SUTH_00683 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain SUTH_00684 PF01196 Ribosomal protein L17 SUTH_00685 PF00009 Elongation factor Tu GTP binding domain SUTH_00686 PF01507 Phosphoadenosine phosphosulfate reductase family SUTH_00687 PF01507 Phosphoadenosine phosphosulfate reductase family SUTH_00688 PF06073 SUTH_00688 SUTH_00689 PF01077 Nitrite and sulphite reductase 4Fe-4S domain SUTH_00689 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain SUTH_00690 PF01925 SUTH_00690 SUTH_00691 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SUTH_00691 PF03466 LysR substrate binding domain SUTH_00692 PF06146 SUTH_00692 SUTH_00693 PF04751 Protein of unknown function (DUF615) SUTH_00694 PF01523 Putative modulator of DNA gyrase SUTH_00696 PF05175 Methyltransferase small domain SUTH_00697 PF00563 EAL domain SUTH_00697 PF00990 GGDEF domain SUTH_00697 PF08448 PAS fold SUTH_00697 PF13426 PAS domain SUTH_00699 PF03480 Bacterial extracellular solute-binding protein, family 7 SUTH_00700 PF06808 SUTH_00700 SUTH_00701 PF04290 SUTH_00701 SUTH_00702 PF00392 Bacterial regulatory proteins, gntR family SUTH_00702 PF07729 FCD domain SUTH_00703 PF00300 Histidine phosphatase superfamily (branch 1) SUTH_00704 PF00464 Serine hydroxymethyltransferase SUTH_00705 PF03477 ATP cone domain SUTH_00706 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region SUTH_00706 PF01872 RibD C-terminal domain SUTH_00708 PF00899 ThiF family SUTH_00710 PF03572 Peptidase family S41 SUTH_00710 PF13180 PDZ domain SUTH_00711 PF01551 Peptidase family M23 SUTH_00712 PF00300 Histidine phosphatase superfamily (branch 1) SUTH_00713 PF01022 Bacterial regulatory protein, arsR family SUTH_00714 PF00581 Rhodanese-like domain SUTH_00715 PF00462 Glutaredoxin SUTH_00716 PF02556 Preprotein translocase subunit SecB SUTH_00717 PF06347 Bacterial SH3 domain SUTH_00718 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus SUTH_00718 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus SUTH_00719 PF00588 SpoU rRNA Methylase family SUTH_00720 PF00437 Type II/IV secretion system protein SUTH_00720 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain SUTH_00721 PF00482 Type II secretion system (T2SS), protein F SUTH_00723 PF07963 Prokaryotic N-terminal methylation motif SUTH_00724 PF07963 Prokaryotic N-terminal methylation motif SUTH_00725 PF04932 SUTH_00725 SUTH_00725 PF11846 SUTH_00725 SUTH_00727 PF05137 SUTH_00727 SUTH_00730 PF00263 SUTH_00730 SUTH_00730 PF07655 SUTH_00730 SUTH_00731 PF13401 AAA domain SUTH_00732 PF14559 Tetratricopeptide repeat SUTH_00734 PF00156 Phosphoribosyl transferase domain SUTH_00735 PF04055 Radical SAM superfamily SUTH_00735 PF06968 Biotin and Thiamin Synthesis associated domain SUTH_00736 PF08241 Methyltransferase domain SUTH_00738 PF00456 Transketolase, thiamine diphosphate binding domain SUTH_00739 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) SUTH_00739 PF00364 Biotin-requiring enzyme SUTH_00739 PF02817 e3 binding domain SUTH_00741 PF00364 Biotin-requiring enzyme SUTH_00741 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain SUTH_00741 PF07992 Pyridine nucleotide-disulphide oxidoreductase SUTH_00742 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) SUTH_00743 PF01895 PhoU domain SUTH_00744 PF04362 Bacterial Fe(2+) trafficking SUTH_00745 PF04940 Sensors of blue-light using FAD SUTH_00746 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SUTH_00746 PF03466 LysR substrate binding domain SUTH_00747 PF02678 Pirin SUTH_00748 PF03358 NADPH-dependent FMN reductase SUTH_00749 PF00583 Acetyltransferase (GNAT) family SUTH_00749 PF00696 Amino acid kinase family SUTH_00750 PF03976 Polyphosphate kinase 2 (PPK2) SUTH_00751 PF04452 RNA methyltransferase SUTH_00752 PF00578 AhpC/TSA family SUTH_00754 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SUTH_00754 PF03466 LysR substrate binding domain SUTH_00755 PF00563 EAL domain SUTH_00755 PF00990 GGDEF domain SUTH_00755 PF08447 PAS fold SUTH_00755 PF12860 SUTH_00755 SUTH_00755 PF13426 PAS domain SUTH_00756 PF13419 Haloacid dehalogenase-like hydrolase SUTH_00757 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain SUTH_00757 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain SUTH_00758 PF07728 AAA domain (dynein-related subfamily) SUTH_00758 PF08406 SUTH_00758 SUTH_00759 PF13519 von Willebrand factor type A domain SUTH_00760 PF09917 Uncharacterized protein conserved in bacteria (DUF2147) SUTH_00761 PF00316 Fructose-1-6-bisphosphatase SUTH_00762 PF00485 Phosphoribulokinase / Uridine kinase family SUTH_00763 PF00456 Transketolase, thiamine diphosphate binding domain SUTH_00763 PF02779 Transketolase, pyrimidine binding domain SUTH_00763 PF02780 Transketolase, C-terminal domain SUTH_00764 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain SUTH_00764 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain SUTH_00765 PF00162 Phosphoglycerate kinase SUTH_00766 PF00224 Pyruvate kinase, barrel domain SUTH_00766 PF02887 Pyruvate kinase, alpha/beta domain SUTH_00767 PF01116 Fructose-bisphosphate aldolase class-II SUTH_00768 PF06146 SUTH_00768 SUTH_00769 PF01259 SAICAR synthetase SUTH_00770 PF09955 SUTH_00770 SUTH_00771 PF01432 Peptidase family M3 SUTH_00772 PF07238 PilZ domain SUTH_00774 PF03372 Endonuclease/Exonuclease/phosphatase family SUTH_00775 PF00027 Cyclic nucleotide-binding domain SUTH_00775 PF13545 Crp-like helix-turn-helix domain SUTH_00776 PF11127 Protein of unknown function (DUF2892) SUTH_00777 PF09982 Uncharacterized protein conserved in bacteria (DUF2219) SUTH_00778 PF03486 HI0933-like protein SUTH_00779 PF00398 Ribosomal RNA adenine dimethylase SUTH_00780 PF13230 Glutamine amidotransferases class-II SUTH_00781 PF04166 Pyridoxal phosphate biosynthetic protein PdxA SUTH_00782 PF00639 PPIC-type PPIASE domain SUTH_00782 PF09312 SurA N-terminal domain SUTH_00782 PF13616 PPIC-type PPIASE domain SUTH_00783 PF04453 Organic solvent tolerance protein SUTH_00784 PF01636 Phosphotransferase enzyme family SUTH_00785 PF00483 Nucleotidyl transferase SUTH_00786 PF00557 Metallopeptidase family M24 SUTH_00786 PF05195 Aminopeptidase P, N-terminal domain SUTH_00787 PF01494 FAD binding domain SUTH_00788 PF01207 Dihydrouridine synthase (Dus) SUTH_00789 PF02954 Bacterial regulatory protein, Fis family SUTH_00790 PF01808 AICARFT/IMPCHase bienzyme SUTH_00790 PF02142 MGS-like domain SUTH_00791 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain SUTH_00791 PF02843 Phosphoribosylglycinamide synthetase, C domain SUTH_00791 PF02844 Phosphoribosylglycinamide synthetase, N domain SUTH_00792 PF02222 ATP-grasp domain SUTH_00793 PF01300 Telomere recombination SUTH_00793 PF03481 Putative GTP-binding controlling metal-binding SUTH_00799 PF13416 Bacterial extracellular solute-binding protein SUTH_00800 PF03009 Glycerophosphoryl diester phosphodiesterase family SUTH_00802 PF01411 tRNA synthetases class II (A) SUTH_00802 PF02272 DHHA1 domain SUTH_00802 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain SUTH_00803 PF04851 Type III restriction enzyme, res subunit SUTH_00804 PF05015 Plasmid maintenance system killer protein SUTH_00805 PF01381 Helix-turn-helix SUTH_00806 PF01555 DNA methylase SUTH_00809 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain SUTH_00809 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I SUTH_00809 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II SUTH_00809 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III SUTH_00810 PF00561 alpha/beta hydrolase fold SUTH_00811 PF13474 SnoaL-like domain SUTH_00812 PF01075 Glycosyltransferase family 9 (heptosyltransferase) SUTH_00813 PF10276 Zinc-finger domain SUTH_00814 PF01063 Aminotransferase class IV SUTH_00815 PF00293 NUDIX domain SUTH_00816 PF03054 tRNA methyl transferase SUTH_00817 PF00216 Bacterial DNA-binding protein SUTH_00818 PF11964 SpoIIAA-like SUTH_00819 PF00581 Rhodanese-like domain SUTH_00820 PF08331 SUTH_00820 SUTH_00820 PF13484 SUTH_00820 SUTH_00821 PF02367 Uncharacterised P-loop hydrolase UPF0079 SUTH_00822 PF01520 N-acetylmuramoyl-L-alanine amidase SUTH_00822 PF11741 AMIN domain SUTH_00823 PF01687 Riboflavin kinase SUTH_00823 PF06574 FAD synthetase SUTH_00824 PF13366 SUTH_00824 SUTH_00825 PF00133 tRNA synthetases class I (I, L, M and V) SUTH_00825 PF06827 Zinc finger found in FPG and IleRS SUTH_00825 PF08264 Anticodon-binding domain of tRNA SUTH_00826 PF01252 SUTH_00826 SUTH_00827 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase SUTH_00828 PF02401 LytB protein SUTH_00829 PF07963 Prokaryotic N-terminal methylation motif SUTH_00830 PF07963 Prokaryotic N-terminal methylation motif SUTH_00831 PF07963 Prokaryotic N-terminal methylation motif SUTH_00835 PF00106 short chain dehydrogenase SUTH_00835 PF00122 E1-E2 ATPase SUTH_00835 PF00403 Heavy-metal-associated domain SUTH_00835 PF00702 haloacid dehalogenase-like hydrolase SUTH_00835 PF12156 SUTH_00835 SUTH_00836 PF03597 SUTH_00836 SUTH_00837 PF00115 Cytochrome C and Quinol oxidase polypeptide I SUTH_00838 PF02433 Cytochrome C oxidase, mono-heme subunit/FixO SUTH_00839 PF05545 SUTH_00839 SUTH_00840 PF13442 Cytochrome C oxidase, cbb3-type, subunit III SUTH_00840 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP SUTH_00841 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase SUTH_00841 PF12801 SUTH_00841 SUTH_00841 PF13746 4Fe-4S dicluster domain SUTH_00842 PF05751 SUTH_00842 SUTH_00844 PF01814 Hemerythrin HHE cation binding domain SUTH_00845 PF00582 Universal stress protein family SUTH_00846 PF07167 SUTH_00846 SUTH_00847 PF01814 Hemerythrin HHE cation binding domain SUTH_00848 PF10006 SUTH_00848 SUTH_00850 PF00027 Cyclic nucleotide-binding domain SUTH_00850 PF13545 Crp-like helix-turn-helix domain SUTH_00851 PF05940 SUTH_00851 SUTH_00852 PF04247 SUTH_00852 SUTH_00853 PF00027 Cyclic nucleotide-binding domain SUTH_00853 PF13545 Crp-like helix-turn-helix domain SUTH_00854 PF04055 Radical SAM superfamily SUTH_00854 PF06969 HemN C-terminal domain SUTH_00855 PF13386 SUTH_00855 SUTH_00856 PF00581 Rhodanese-like domain SUTH_00857 PF00122 E1-E2 ATPase SUTH_00857 PF00403 Heavy-metal-associated domain SUTH_00857 PF00702 haloacid dehalogenase-like hydrolase SUTH_00858 PF00403 Heavy-metal-associated domain SUTH_00859 PF00210 Ferritin-like domain SUTH_00860 PF07992 Pyridine nucleotide-disulphide oxidoreductase SUTH_00860 PF13192 Thioredoxin domain SUTH_00861 PF00578 AhpC/TSA family SUTH_00861 PF10417 C-terminal domain of 1-Cys peroxiredoxin SUTH_00864 PF12801 SUTH_00864 SUTH_00865 PF13473 Cupredoxin-like domain SUTH_00866 PF04966 Carbohydrate-selective porin, OprB family SUTH_00867 PF10634 Fe2+ transport protein SUTH_00868 PF10636 Hemin uptake protein hemP SUTH_00869 PF00719 Inorganic pyrophosphatase SUTH_00870 PF00795 Carbon-nitrogen hydrolase SUTH_00870 PF02540 NAD synthase SUTH_00871 PF00543 Nitrogen regulatory protein P-II SUTH_00872 PF01713 Smr domain SUTH_00873 PF07992 Pyridine nucleotide-disulphide oxidoreductase SUTH_00874 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB SUTH_00874 PF08479 POTRA domain, ShlB-type SUTH_00875 PF05860 haemagglutination activity domain SUTH_00875 PF12951 SUTH_00875 SUTH_00877 PF04773 FecR protein SUTH_00878 PF01580 FtsK/SpoIIIE family SUTH_00878 PF09397 Ftsk gamma domain SUTH_00878 PF13491 SUTH_00878 SUTH_00879 PF03548 Outer membrane lipoprotein carrier protein LolA SUTH_00880 PF00004 ATPase family associated with various cellular activities (AAA) SUTH_00880 PF12002 MgsA AAA+ ATPase C terminal SUTH_00880 PF16193 SUTH_00880 SUTH_00881 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) SUTH_00881 PF02403 Seryl-tRNA synthetase N-terminal domain SUTH_00882 PF00497 Bacterial extracellular solute-binding proteins, family 3 SUTH_00882 PF01464 Transglycosylase SLT domain SUTH_00884 PF04055 Radical SAM superfamily SUTH_00884 PF08497 SUTH_00884 SUTH_00884 PF11842 SUTH_00884 SUTH_00885 PF14279 SUTH_00885 SUTH_00886 PF03544 Gram-negative bacterial TonB protein C-terminal SUTH_00887 PF00293 NUDIX domain SUTH_00887 PF14803 Nudix N-terminal SUTH_00888 PF05247 Flagellar transcriptional activator (FlhD) SUTH_00889 PF05280 Flagellar transcriptional activator (FlhC) SUTH_00890 PF01618 SUTH_00890 SUTH_00891 PF00691 OmpA family SUTH_00891 PF13677 SUTH_00891 SUTH_00892 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SUTH_00893 PF00072 Response regulator receiver domain SUTH_00894 PF01584 CheW-like domain SUTH_00894 PF01627 Hpt domain SUTH_00894 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SUTH_00894 PF02895 Signal transducing histidine kinase, homodimeric domain SUTH_00895 PF01584 CheW-like domain SUTH_00896 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SUTH_00896 PF08447 PAS fold SUTH_00896 PF12729 SUTH_00896 SUTH_00896 PF13188 PAS domain SUTH_00897 PF01739 CheR methyltransferase, SAM binding domain SUTH_00897 PF03705 CheR methyltransferase, all-alpha domain SUTH_00898 PF03975 CheD chemotactic sensory transduction SUTH_00899 PF00072 Response regulator receiver domain SUTH_00899 PF01339 CheB methylesterase SUTH_00900 PF13466 STAS domain SUTH_00901 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SUTH_00902 PF00072 Response regulator receiver domain SUTH_00902 PF01584 CheW-like domain SUTH_00903 PF00072 Response regulator receiver domain SUTH_00903 PF01584 CheW-like domain SUTH_00904 PF00072 Response regulator receiver domain SUTH_00905 PF04344 Chemotaxis phosphatase, CheZ SUTH_00906 PF01584 CheW-like domain SUTH_00906 PF01627 Hpt domain SUTH_00906 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SUTH_00906 PF02895 Signal transducing histidine kinase, homodimeric domain SUTH_00907 PF01312 FlhB HrpN YscU SpaS Family SUTH_00908 PF00771 FHIPEP family SUTH_00909 PF00448 SRP54-type protein, GTPase domain SUTH_00910 PF13614 AAA domain SUTH_00911 PF04539 Sigma-70 region 3 SUTH_00911 PF04542 Sigma-70 region 2 SUTH_00911 PF04545 Sigma-70, region 4 SUTH_00912 PF01618 SUTH_00912 SUTH_00913 PF00691 OmpA family SUTH_00913 PF13677 SUTH_00913 SUTH_00914 PF05130 FlgN protein SUTH_00915 PF04316 Anti-sigma-28 factor, FlgM SUTH_00916 PF13144 SAF-like SUTH_00917 PF00460 Flagella basal body rod protein SUTH_00918 PF00460 Flagella basal body rod protein SUTH_00918 PF06429 Flagellar basal body rod FlgEFG protein C-terminal SUTH_00919 PF03963 SUTH_00919 SUTH_00919 PF13860 FlgD Ig-like domain SUTH_00919 PF13861 FlgD Tudor-like domain SUTH_00920 PF00460 Flagella basal body rod protein SUTH_00920 PF06429 Flagellar basal body rod FlgEFG protein C-terminal SUTH_00920 PF07559 Flagellar basal body protein FlaE SUTH_00921 PF00460 Flagella basal body rod protein SUTH_00921 PF06429 Flagellar basal body rod FlgEFG protein C-terminal SUTH_00922 PF00460 Flagella basal body rod protein SUTH_00922 PF06429 Flagellar basal body rod FlgEFG protein C-terminal SUTH_00922 PF07559 Flagellar basal body protein FlaE SUTH_00923 PF00460 Flagella basal body rod protein SUTH_00923 PF06429 Flagellar basal body rod FlgEFG protein C-terminal SUTH_00924 PF02107 SUTH_00924 SUTH_00925 PF02119 SUTH_00925 SUTH_00926 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase SUTH_00926 PF10135 SUTH_00926 SUTH_00927 PF00460 Flagella basal body rod protein SUTH_00927 PF06429 Flagellar basal body rod FlgEFG protein C-terminal SUTH_00928 PF00669 Bacterial flagellin N-terminal helical region SUTH_00928 PF00700 Bacterial flagellin C-terminal helical region SUTH_00930 PF01311 SUTH_00930 SUTH_00931 PF01313 SUTH_00931 SUTH_00932 PF00813 SUTH_00932 SUTH_00933 PF04347 SUTH_00933 SUTH_00934 PF01052 Surface presentation of antigens (SPOA) SUTH_00935 PF01052 Surface presentation of antigens (SPOA) SUTH_00935 PF02154 Flagellar motor switch protein FliM SUTH_00936 PF03748 SUTH_00936 SUTH_00937 PF02120 Flagellar hook-length control protein FliK SUTH_00938 PF02050 Flagellar FliJ protein SUTH_00939 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain SUTH_00940 PF02108 SUTH_00940 SUTH_00941 PF01706 FliG C-terminal domain SUTH_00941 PF14841 FliG middle domain SUTH_00941 PF14842 FliG N-terminal domain SUTH_00942 PF01514 Secretory protein of YscJ/FliF family SUTH_00942 PF08345 SUTH_00942 SUTH_00943 PF00512 His Kinase A (phospho-acceptor) domain SUTH_00943 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SUTH_00943 PF13188 PAS domain SUTH_00944 PF00072 Response regulator receiver domain SUTH_00944 PF00158 Sigma-54 interaction domain SUTH_00944 PF02954 Bacterial regulatory protein, Fis family SUTH_00945 PF02049 SUTH_00945 SUTH_00946 PF02321 Outer membrane efflux protein SUTH_00947 PF13437 HlyD family secretion protein SUTH_00947 PF13533 Biotin-lipoyl like SUTH_00948 PF00005 ABC transporter SUTH_00948 PF00664 ABC transporter transmembrane region SUTH_00949 PF13432 Tetratricopeptide repeat SUTH_00949 PF13844 Glycosyl transferase family 41 SUTH_00949 PF14559 Tetratricopeptide repeat SUTH_00950 PF08241 Methyltransferase domain SUTH_00951 PF08241 Methyltransferase domain SUTH_00953 PF00534 Glycosyl transferases group 1 SUTH_00956 PF10119 SUTH_00956 SUTH_00957 PF08238 Sel1 repeat SUTH_00958 PF04381 Putative exonuclease, RdgC SUTH_00959 PF01435 Peptidase family M48 SUTH_00960 PF07238 PilZ domain SUTH_00960 PF07317 Flagellar regulator YcgR SUTH_00961 PF01312 FlhB HrpN YscU SpaS Family SUTH_00962 PF02120 Flagellar hook-length control protein FliK SUTH_00963 PF05400 Flagellar protein FliT SUTH_00964 PF02561 Flagellar protein FliS SUTH_00965 PF02465 SUTH_00965 SUTH_00965 PF07195 SUTH_00965 SUTH_00966 PF03646 FlaG protein SUTH_00967 PF00669 Bacterial flagellin N-terminal helical region SUTH_00967 PF00700 Bacterial flagellin C-terminal helical region SUTH_00967 PF07196 Flagellin hook IN motif SUTH_00968 PF00669 Bacterial flagellin N-terminal helical region SUTH_00968 PF00700 Bacterial flagellin C-terminal helical region SUTH_00968 PF07196 Flagellin hook IN motif SUTH_00970 PF07690 Major Facilitator Superfamily SUTH_00971 PF01272 Transcription elongation factor, GreA/GreB, C-term SUTH_00971 PF03449 Transcription elongation factor, N-terminal SUTH_00972 PF02628 SUTH_00972 SUTH_00973 PF01967 MoaC family SUTH_00974 PF01435 Peptidase family M48 SUTH_00974 PF14559 Tetratricopeptide repeat SUTH_00975 PF07728 AAA domain (dynein-related subfamily) SUTH_00975 PF08406 SUTH_00975 SUTH_00977 PF13649 Methyltransferase domain SUTH_00978 PF00581 Rhodanese-like domain SUTH_00978 PF12840 Helix-turn-helix domain SUTH_00979 PF02635 DsrE/DsrF-like family SUTH_00980 PF11278 SUTH_00980 SUTH_00981 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase SUTH_00981 PF12801 SUTH_00981 SUTH_00981 PF13746 4Fe-4S dicluster domain SUTH_00982 PF01814 Hemerythrin HHE cation binding domain SUTH_00983 PF00175 Oxidoreductase NAD-binding domain SUTH_00983 PF00970 Oxidoreductase FAD-binding domain SUTH_00985 PF10006 SUTH_00985 SUTH_00986 PF01883 Domain of unknown function DUF59 SUTH_00987 PF02082 Transcriptional regulator SUTH_00990 PF12802 MarR family SUTH_00991 PF04358 DsrC like protein SUTH_00992 PF13424 Tetratricopeptide repeat SUTH_00992 PF13432 Tetratricopeptide repeat SUTH_00992 PF13844 Glycosyl transferase family 41 SUTH_00993 PF13578 Methyltransferase domain SUTH_00995 PF00132 Bacterial transferase hexapeptide (six repeats) SUTH_00996 PF00550 Phosphopantetheine attachment site SUTH_00997 PF13561 Enoyl-(Acyl carrier protein) reductase SUTH_00998 PF00551 Formyl transferase SUTH_00998 PF02911 Formyl transferase, C-terminal domain SUTH_00999 PF00501 AMP-binding enzyme SUTH_00999 PF13193 AMP-binding enzyme C-terminal domain SUTH_01000 PF08889 SUTH_01000 SUTH_01001 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family SUTH_01002 PF00072 Response regulator receiver domain SUTH_01002 PF03861 ANTAR domain SUTH_01003 PF13379 NMT1-like family SUTH_01004 PF00528 Binding-protein-dependent transport system inner membrane component SUTH_01005 PF00005 ABC transporter SUTH_01006 PF01077 Nitrite and sulphite reductase 4Fe-4S domain SUTH_01006 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain SUTH_01006 PF04324 BFD-like [2Fe-2S] binding domain SUTH_01006 PF07992 Pyridine nucleotide-disulphide oxidoreductase SUTH_01007 PF13806 Rieske-like [2Fe-2S] domain SUTH_01008 PF00384 Molybdopterin oxidoreductase SUTH_01008 PF04879 Molybdopterin oxidoreductase Fe4S4 domain SUTH_01009 PF00384 Molybdopterin oxidoreductase SUTH_01009 PF01568 Molydopterin dinucleotide binding domain SUTH_01009 PF04324 BFD-like [2Fe-2S] binding domain SUTH_01010 PF16697 SUTH_01010 SUTH_01011 PF00027 Cyclic nucleotide-binding domain SUTH_01011 PF00069 Protein kinase domain SUTH_01012 PF00183 Hsp90 protein SUTH_01012 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SUTH_01013 PF03167 Uracil DNA glycosylase superfamily SUTH_01014 PF00343 Carbohydrate phosphorylase SUTH_01019 PF01323 DSBA-like thioredoxin domain SUTH_01020 PF00072 Response regulator receiver domain SUTH_01020 PF00512 His Kinase A (phospho-acceptor) domain SUTH_01020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SUTH_01020 PF08448 PAS fold SUTH_01020 PF11845 SUTH_01020 SUTH_01021 PF07690 Major Facilitator Superfamily SUTH_01022 PF01557 Fumarylacetoacetate (FAA) hydrolase family SUTH_01022 PF10370 Domain of unknown function (DUF2437) SUTH_01023 PF05099 Tellurite resistance protein TerB SUTH_01025 PF00437 Type II/IV secretion system protein SUTH_01025 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain SUTH_01030 PF05762 VWA domain containing CoxE-like protein SUTH_01031 PF13366 SUTH_01031 SUTH_01032 PF00004 ATPase family associated with various cellular activities (AAA) SUTH_01033 PF08897 SUTH_01033 SUTH_01034 PF00633 Helix-hairpin-helix motif SUTH_01034 PF00730 HhH-GPD superfamily base excision DNA repair protein SUTH_01034 PF10576 Iron-sulfur binding domain of endonuclease III SUTH_01035 PF02508 SUTH_01035 SUTH_01036 PF04205 FMN-binding domain SUTH_01037 PF03116 SUTH_01037 SUTH_01038 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit SUTH_01038 PF10531 SLBB domain SUTH_01038 PF13237 4Fe-4S dicluster domain SUTH_01038 PF13375 RnfC Barrel sandwich hybrid domain SUTH_01039 PF04060 Putative Fe-S cluster SUTH_01039 PF14697 4Fe-4S dicluster domain SUTH_01040 PF02508 SUTH_01040 SUTH_01041 PF01180 Dihydroorotate dehydrogenase SUTH_01047 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit SUTH_01049 PF01171 PP-loop family SUTH_01049 PF09179 TilS substrate binding domain SUTH_01050 PF00072 Response regulator receiver domain SUTH_01050 PF00196 Bacterial regulatory proteins, luxR family SUTH_01051 PF00512 His Kinase A (phospho-acceptor) domain SUTH_01051 PF00989 PAS fold SUTH_01051 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SUTH_01052 PF03480 Bacterial extracellular solute-binding protein, family 7 SUTH_01053 PF04290 SUTH_01053 SUTH_01054 PF06808 SUTH_01054 SUTH_01055 PF00334 Nucleoside diphosphate kinase SUTH_01056 PF04055 Radical SAM superfamily SUTH_01057 PF13432 Tetratricopeptide repeat SUTH_01058 PF13413 Helix-turn-helix domain SUTH_01058 PF13464 SUTH_01058 SUTH_01059 PF04551 GcpE protein SUTH_01060 PF03129 Anticodon binding domain SUTH_01060 PF13393 Histidyl-tRNA synthetase SUTH_01061 PF09976 Tetratricopeptide repeat SUTH_01062 PF13360 PQQ-like domain SUTH_01063 PF01926 50S ribosome-binding GTPase SUTH_01063 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal SUTH_01064 PF17209 SUTH_01064 SUTH_01065 PF01926 50S ribosome-binding GTPase SUTH_01065 PF13167 SUTH_01065 SUTH_01065 PF16360 SUTH_01065 SUTH_01066 PF01145 SPFH domain / Band 7 family SUTH_01066 PF12221 SUTH_01066 SUTH_01067 PF01145 SPFH domain / Band 7 family SUTH_01068 PF09838 SUTH_01068 SUTH_01069 PF13393 Histidyl-tRNA synthetase SUTH_01070 PF00709 Adenylosuccinate synthetase SUTH_01072 PF00575 S1 RNA binding domain SUTH_01072 PF00773 RNB domain SUTH_01072 PF08206 Ribonuclease B OB domain SUTH_01073 PF00471 Ribosomal protein L33 SUTH_01074 PF00830 Ribosomal L28 family SUTH_01075 PF04002 RadC-like JAB domain SUTH_01076 PF02441 Flavoprotein SUTH_01076 PF04127 DNA / pantothenate metabolism flavoprotein SUTH_01077 PF00692 dUTPase SUTH_01078 PF00034 Cytochrome c SUTH_01078 PF13442 Cytochrome C oxidase, cbb3-type, subunit III SUTH_01079 PF07992 Pyridine nucleotide-disulphide oxidoreductase SUTH_01079 PF09242 Flavocytochrome c sulphide dehydrogenase, flavin-binding SUTH_01080 PF13442 Cytochrome C oxidase, cbb3-type, subunit III SUTH_01081 PF03264 NapC/NirT cytochrome c family, N-terminal region SUTH_01081 PF09459 Ethylbenzene dehydrogenase SUTH_01082 PF01274 Malate synthase SUTH_01083 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SUTH_01083 PF03466 LysR substrate binding domain SUTH_01084 PF12146 Putative lysophospholipase SUTH_01085 PF00463 Isocitrate lyase family SUTH_01086 PF03737 Demethylmenaquinone methyltransferase SUTH_01087 PF00004 ATPase family associated with various cellular activities (AAA) SUTH_01087 PF02861 Clp amino terminal domain SUTH_01087 PF07724 AAA domain (Cdc48 subfamily) SUTH_01087 PF10431 C-terminal, D2-small domain, of ClpB protein SUTH_01088 PF02617 ATP-dependent Clp protease adaptor protein ClpS SUTH_01089 PF00313 'Cold-shock' DNA-binding domain SUTH_01090 PF00180 Isocitrate/isopropylmalate dehydrogenase SUTH_01091 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) SUTH_01092 PF00849 RNA pseudouridylate synthase SUTH_01094 PF02643 Uncharacterized ACR, COG1430 SUTH_01095 PF04102 SlyX SUTH_01096 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain SUTH_01096 PF02777 Iron/manganese superoxide dismutases, C-terminal domain SUTH_01097 PF02601 SUTH_01097 SUTH_01097 PF13742 SUTH_01097 SUTH_01098 PF08238 Sel1 repeat SUTH_01100 PF01618 SUTH_01100 SUTH_01101 PF02472 Biopolymer transport protein ExbD/TolR SUTH_01102 PF02606 Tetraacyldisaccharide-1-P 4'-kinase SUTH_01103 PF03966 Trm112p-like protein SUTH_01104 PF02348 Cytidylyltransferase SUTH_01105 PF00406 Adenylate kinase SUTH_01105 PF05191 Adenylate kinase, active site lid SUTH_01106 PF00365 Phosphofructokinase SUTH_01107 PF00365 Phosphofructokinase SUTH_01108 PF03030 Inorganic H+ pyrophosphatase SUTH_01109 PF01019 Gamma-glutamyltranspeptidase SUTH_01110 PF03023 SUTH_01110 SUTH_01111 PF01649 Ribosomal protein S20 SUTH_01112 PF13614 AAA domain SUTH_01113 PF00202 Aminotransferase class-III SUTH_01114 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain SUTH_01114 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain SUTH_01115 PF00764 Arginosuccinate synthase SUTH_01116 PF10981 SUTH_01116 SUTH_01117 PF06865 Protein of unknown function (DUF1255) SUTH_01118 PF04461 Protein of unknown function (DUF520) SUTH_01119 PF00117 Glutamine amidotransferase class-I SUTH_01120 PF00293 NUDIX domain SUTH_01121 PF03186 SUTH_01121 SUTH_01122 PF00108 Thiolase, N-terminal domain SUTH_01122 PF02803 Thiolase, C-terminal domain SUTH_01123 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SUTH_01123 PF08376 Nitrate and nitrite sensing SUTH_01124 PF01527 Transposase SUTH_01125 PF00582 Universal stress protein family SUTH_01125 PF00916 SUTH_01125 SUTH_01125 PF01740 STAS domain SUTH_01126 PF00501 AMP-binding enzyme SUTH_01126 PF13193 AMP-binding enzyme C-terminal domain SUTH_01127 PF00441 Acyl-CoA dehydrogenase, C-terminal domain SUTH_01127 PF02770 Acyl-CoA dehydrogenase, middle domain SUTH_01127 PF02771 Acyl-CoA dehydrogenase, N-terminal domain SUTH_01128 PF01636 Phosphotransferase enzyme family SUTH_01129 PF00107 Zinc-binding dehydrogenase SUTH_01129 PF16884 SUTH_01129 SUTH_01130 PF03061 Thioesterase superfamily SUTH_01131 PF01609 Transposase DDE domain SUTH_01131 PF05598 SUTH_01131 SUTH_01132 PF00106 short chain dehydrogenase SUTH_01133 PF00108 Thiolase, N-terminal domain SUTH_01133 PF02803 Thiolase, C-terminal domain SUTH_01134 PF00378 Enoyl-CoA hydratase/isomerase family SUTH_01134 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain SUTH_01134 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain SUTH_01135 PF00005 ABC transporter SUTH_01136 PF00005 ABC transporter SUTH_01136 PF12399 Branched-chain amino acid ATP-binding cassette transporter SUTH_01137 PF02653 SUTH_01137 SUTH_01138 PF02653 SUTH_01138 SUTH_01139 PF13458 Periplasmic binding protein SUTH_01140 PF12770 SUTH_01140 SUTH_01141 PF00781 Diacylglycerol kinase catalytic domain SUTH_01142 PF12770 SUTH_01142 SUTH_01143 PF12770 SUTH_01143 SUTH_01144 PF01926 50S ribosome-binding GTPase SUTH_01145 PF13275 S4 domain SUTH_01146 PF08668 HDOD domain SUTH_01147 PF01794 SUTH_01147 SUTH_01147 PF08022 SUTH_01147 SUTH_01148 PF13670 SUTH_01148 SUTH_01149 PF09626 Dihaem cytochrome c SUTH_01150 PF09086 Domain of unknown function (DUF1924) SUTH_01151 PF03413 Peptidase propeptide and YPEB domain SUTH_01152 PF00072 Response regulator receiver domain SUTH_01152 PF00486 Transcriptional regulatory protein, C terminal SUTH_01153 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SUTH_01154 PF02639 SUTH_01154 SUTH_01156 PF02423 Ornithine cyclodeaminase/mu-crystallin family SUTH_01158 PF02630 SCO1/SenC SUTH_01160 PF00211 Adenylate and Guanylate cyclase catalytic domain SUTH_01160 PF00498 FHA domain SUTH_01162 PF04307 SUTH_01162 SUTH_01163 PF00005 ABC transporter SUTH_01163 PF08352 Oligopeptide/dipeptide transporter, C-terminal region SUTH_01164 PF00528 Binding-protein-dependent transport system inner membrane component SUTH_01164 PF12911 SUTH_01164 SUTH_01165 PF00528 Binding-protein-dependent transport system inner membrane component SUTH_01166 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle SUTH_01167 PF01464 Transglycosylase SLT domain SUTH_01167 PF01476 LysM domain SUTH_01168 PF00656 Caspase domain SUTH_01169 PF00753 Metallo-beta-lactamase superfamily SUTH_01169 PF16123 SUTH_01169 SUTH_01170 PF08241 Methyltransferase domain SUTH_01171 PF00075 RNase H SUTH_01172 PF00929 Exonuclease SUTH_01175 PF00171 Aldehyde dehydrogenase family SUTH_01176 PF00107 Zinc-binding dehydrogenase SUTH_01176 PF08240 Alcohol dehydrogenase GroES-like domain SUTH_01177 PF00106 short chain dehydrogenase SUTH_01178 PF00440 Bacterial regulatory proteins, tetR family SUTH_01179 PF03007 SUTH_01179 SUTH_01179 PF06974 SUTH_01179 SUTH_01181 PF03007 SUTH_01181 SUTH_01181 PF06974 SUTH_01181 SUTH_01182 PF00561 alpha/beta hydrolase fold SUTH_01183 PF05139 Erythromycin esterase SUTH_01184 PF01207 Dihydrouridine synthase (Dus) SUTH_01185 PF01136 SUTH_01185 SUTH_01185 PF12392 SUTH_01185 SUTH_01186 PF00072 Response regulator receiver domain SUTH_01186 PF00512 His Kinase A (phospho-acceptor) domain SUTH_01186 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SUTH_01186 PF08448 PAS fold SUTH_01190 PF12770 SUTH_01190 SUTH_01191 PF00355 Rieske [2Fe-2S] domain SUTH_01192 PF00892 EamA-like transporter family SUTH_01194 PF00005 ABC transporter SUTH_01194 PF12848 ABC transporter SUTH_01195 PF01845 CcdB protein SUTH_01196 PF07362 Post-segregation antitoxin CcdA SUTH_01198 PF00364 Biotin-requiring enzyme SUTH_01199 PF01136 SUTH_01199 SUTH_01199 PF16325 SUTH_01199 SUTH_01200 PF13410 Glutathione S-transferase, C-terminal domain SUTH_01200 PF13417 Glutathione S-transferase, N-terminal domain SUTH_01201 PF13740 ACT domain SUTH_01202 PF01850 PIN domain SUTH_01203 PF04014 Antidote-toxin recognition MazE SUTH_01204 PF02347 Glycine cleavage system P-protein SUTH_01205 PF01597 Glycine cleavage H-protein SUTH_01206 PF01571 Aminomethyltransferase folate-binding domain SUTH_01206 PF08669 Glycine cleavage T-protein C-terminal barrel domain SUTH_01207 PF08668 HDOD domain SUTH_01208 PF00563 EAL domain SUTH_01208 PF00990 GGDEF domain SUTH_01209 PF00717 Peptidase S24-like SUTH_01209 PF01726 LexA DNA binding domain SUTH_01210 PF00797 N-acetyltransferase SUTH_01211 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain SUTH_01212 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase SUTH_01213 PF03061 Thioesterase superfamily SUTH_01214 PF00990 GGDEF domain SUTH_01215 PF01966 HD domain SUTH_01216 PF00578 AhpC/TSA family SUTH_01218 PF04542 Sigma-70 region 2 SUTH_01218 PF08281 Sigma-70, region 4 SUTH_01219 PF07681 SUTH_01219 SUTH_01220 PF09836 Uncharacterized protein conserved in bacteria (DUF2063) SUTH_01221 PF05114 Protein of unknown function (DUF692) SUTH_01223 PF03480 Bacterial extracellular solute-binding protein, family 7 SUTH_01224 PF06808 SUTH_01224 SUTH_01225 PF04290 SUTH_01225 SUTH_01226 PF01047 MarR family SUTH_01227 PF02653 SUTH_01227 SUTH_01228 PF00005 ABC transporter SUTH_01228 PF02653 SUTH_01228 SUTH_01228 PF12399 Branched-chain amino acid ATP-binding cassette transporter SUTH_01229 PF00005 ABC transporter SUTH_01230 PF13458 Periplasmic binding protein SUTH_01231 PF00501 AMP-binding enzyme SUTH_01232 PF00378 Enoyl-CoA hydratase/isomerase family SUTH_01233 PF04909 Amidohydrolase SUTH_01234 PF00441 Acyl-CoA dehydrogenase, C-terminal domain SUTH_01234 PF02770 Acyl-CoA dehydrogenase, middle domain SUTH_01234 PF02771 Acyl-CoA dehydrogenase, N-terminal domain SUTH_01234 PF12418 SUTH_01234 SUTH_01234 PF12806 SUTH_01234 SUTH_01235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SUTH_01235 PF03466 LysR substrate binding domain SUTH_01236 PF13531 Bacterial extracellular solute-binding protein SUTH_01237 PF04909 Amidohydrolase SUTH_01238 PF03737 Demethylmenaquinone methyltransferase SUTH_01239 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase SUTH_01239 PF09130 Domain of unknown function (DUF1932) SUTH_01240 PF04909 Amidohydrolase SUTH_01241 PF07746 Aromatic-ring-opening dioxygenase LigAB, LigA subunit SUTH_01242 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase SUTH_01243 PF01408 Oxidoreductase family, NAD-binding Rossmann fold SUTH_01244 PF00248 Aldo/keto reductase family SUTH_01245 PF07746 Aromatic-ring-opening dioxygenase LigAB, LigA subunit SUTH_01246 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase SUTH_01247 PF01494 FAD binding domain SUTH_01249 PF01850 PIN domain SUTH_01250 PF03547 SUTH_01250 SUTH_01252 PF01609 Transposase DDE domain SUTH_01252 PF05598 SUTH_01252 SUTH_01254 PF07693 SUTH_01254 SUTH_01256 PF00023 Ankyrin repeat SUTH_01256 PF12796 Ankyrin repeats (3 copies) SUTH_01257 PF00072 Response regulator receiver domain SUTH_01259 PF00990 GGDEF domain SUTH_01261 PF08282 haloacid dehalogenase-like hydrolase SUTH_01262 PF02754 SUTH_01262 SUTH_01262 PF13183 4Fe-4S dicluster domain SUTH_01263 PF01266 FAD dependent oxidoreductase SUTH_01263 PF04324 BFD-like [2Fe-2S] binding domain SUTH_01264 PF00890 FAD binding domain SUTH_01265 PF00005 ABC transporter SUTH_01265 PF08402 TOBE domain SUTH_01266 PF00528 Binding-protein-dependent transport system inner membrane component SUTH_01267 PF00528 Binding-protein-dependent transport system inner membrane component SUTH_01268 PF13416 Bacterial extracellular solute-binding protein SUTH_01269 PF00390 Malic enzyme, N-terminal domain SUTH_01269 PF03949 Malic enzyme, NAD binding domain SUTH_01270 PF13548 SUTH_01270 SUTH_01271 PF02628 SUTH_01271 SUTH_01275 PF00892 EamA-like transporter family SUTH_01277 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system SUTH_01278 PF06296 SUTH_01278 SUTH_01279 PF13560 Helix-turn-helix domain SUTH_01280 PF06189 SUTH_01280 SUTH_01281 PF10049 SUTH_01281 SUTH_01282 PF13280 SUTH_01282 SUTH_01283 PF03193 Protein of unknown function, DUF258 SUTH_01284 PF01329 Pterin 4 alpha carbinolamine dehydratase SUTH_01285 PF01435 Peptidase family M48 SUTH_01285 PF16491 SUTH_01285 SUTH_01286 PF00929 Exonuclease SUTH_01287 PF13231 SUTH_01287 SUTH_01288 PF01197 Ribosomal protein L31 SUTH_01289 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain SUTH_01289 PF07497 Rho termination factor, RNA-binding domain SUTH_01289 PF07498 Rho termination factor, N-terminal domain SUTH_01290 PF00085 Thioredoxin SUTH_01291 PF00037 4Fe-4S binding domain SUTH_01291 PF11953 Domain of unknown function (DUF3470) SUTH_01292 PF01264 Chorismate synthase SUTH_01293 PF04325 Protein of unknown function (DUF465) SUTH_01294 PF12832 MFS_1 like family SUTH_01295 PF00330 Aconitase family (aconitate hydratase) SUTH_01296 PF08085 SUTH_01296 SUTH_01297 PF00694 Aconitase C-terminal domain SUTH_01298 PF00180 Isocitrate/isopropylmalate dehydrogenase SUTH_01299 PF01118 Semialdehyde dehydrogenase, NAD binding domain SUTH_01299 PF02774 Semialdehyde dehydrogenase, dimerisation domain SUTH_01301 PF02361 Cobalt transport protein SUTH_01302 PF01416 tRNA pseudouridine synthase SUTH_01303 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase SUTH_01304 PF00291 Pyridoxal-phosphate dependent enzyme SUTH_01305 PF00290 Tryptophan synthase alpha chain SUTH_01306 PF01039 Carboxyl transferase domain SUTH_01307 PF08245 Mur ligase middle domain SUTH_01308 PF05036 Sporulation related domain SUTH_01309 PF02674 SUTH_01309 SUTH_01310 PF00156 Phosphoribosyl transferase domain SUTH_01310 PF13522 Glutamine amidotransferase domain SUTH_01311 PF01053 Cys/Met metabolism PLP-dependent enzyme SUTH_01312 PF12850 Calcineurin-like phosphoesterase superfamily domain SUTH_01313 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD SUTH_01314 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD SUTH_01315 PF03734 L,D-transpeptidase catalytic domain SUTH_01316 PF14534 Domain of unknown function (DUF4440) SUTH_01316 PF14559 Tetratricopeptide repeat SUTH_01317 PF01406 tRNA synthetases class I (C) catalytic domain SUTH_01317 PF09190 DALR domain SUTH_01319 PF09827 CRISPR associated protein Cas2 SUTH_01320 PF01867 CRISPR associated protein Cas1 SUTH_01321 PF13395 HNH endonuclease SUTH_01322 PF15781 SUTH_01322 SUTH_01323 PF11903 SUTH_01323 SUTH_01324 PF00226 DnaJ domain SUTH_01324 PF00684 DnaJ central domain SUTH_01324 PF01556 DnaJ C terminal domain SUTH_01325 PF00012 Hsp70 protein SUTH_01326 PF01025 GrpE SUTH_01327 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SUTH_01327 PF00672 HAMP domain SUTH_01328 PF00563 EAL domain SUTH_01328 PF00990 GGDEF domain SUTH_01328 PF08376 Nitrate and nitrite sensing SUTH_01328 PF13426 PAS domain SUTH_01330 PF00085 Thioredoxin SUTH_01331 PF00762 Ferrochelatase SUTH_01332 PF01628 HrcA protein C terminal domain SUTH_01332 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding SUTH_01333 PF01513 ATP-NAD kinase SUTH_01334 PF02463 RecF/RecN/SMC N terminal domain SUTH_01335 PF01169 SUTH_01335 SUTH_01336 PF01475 Ferric uptake regulator family SUTH_01337 PF04355 SmpA / OmlA family SUTH_01338 PF01113 Dihydrodipicolinate reductase, N-terminus SUTH_01338 PF05173 Dihydrodipicolinate reductase, C-terminus SUTH_01339 PF00117 Glutamine amidotransferase class-I SUTH_01339 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain SUTH_01340 PF01810 SUTH_01340 SUTH_01341 PF02142 MGS-like domain SUTH_01341 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain SUTH_01341 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain SUTH_01342 PF01272 Transcription elongation factor, GreA/GreB, C-term SUTH_01342 PF03449 Transcription elongation factor, N-terminal SUTH_01343 PF13664 SUTH_01343 SUTH_01344 PF01985 CRS1 / YhbY (CRM) domain SUTH_01345 PF01728 FtsJ-like methyltransferase SUTH_01346 PF00004 ATPase family associated with various cellular activities (AAA) SUTH_01346 PF01434 Peptidase family M41 SUTH_01346 PF06480 FtsH Extracellular SUTH_01347 PF00809 Pterin binding enzyme SUTH_01348 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain SUTH_01348 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I SUTH_01348 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II SUTH_01348 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III SUTH_01349 PF00563 EAL domain SUTH_01349 PF00571 CBS domain SUTH_01349 PF00990 GGDEF domain SUTH_01350 PF09345 SUTH_01350 SUTH_01352 PF07228 Stage II sporulation protein E (SpoIIE) SUTH_01353 PF00246 Zinc carboxypeptidase SUTH_01354 PF12697 Alpha/beta hydrolase family SUTH_01355 PF12850 Calcineurin-like phosphoesterase superfamily domain SUTH_01356 PF13439 Glycosyltransferase Family 4 SUTH_01356 PF13692 Glycosyl transferases group 1 SUTH_01357 PF01219 Prokaryotic diacylglycerol kinase SUTH_01358 PF00534 Glycosyl transferases group 1 SUTH_01358 PF13439 Glycosyltransferase Family 4 SUTH_01359 PF13444 Acetyltransferase (GNAT) domain SUTH_01360 PF01553 Acyltransferase SUTH_01361 PF12727 PBP superfamily domain SUTH_01362 PF00528 Binding-protein-dependent transport system inner membrane component SUTH_01363 PF00528 Binding-protein-dependent transport system inner membrane component SUTH_01364 PF00005 ABC transporter SUTH_01365 PF03150 Di-haem cytochrome c peroxidase SUTH_01369 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily SUTH_01371 PF02313 Fumarate reductase subunit D SUTH_01372 PF02300 Fumarate reductase subunit C SUTH_01373 PF13085 2Fe-2S iron-sulfur cluster binding domain SUTH_01373 PF13183 4Fe-4S dicluster domain SUTH_01374 PF00890 FAD binding domain SUTH_01374 PF02910 Fumarate reductase flavoprotein C-term SUTH_01375 PF00121 Triosephosphate isomerase SUTH_01376 PF03840 Preprotein translocase SecG subunit SUTH_01378 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 SUTH_01379 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit SUTH_01380 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit SUTH_01381 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit SUTH_01382 PF01257 Thioredoxin-like [2Fe-2S] ferredoxin SUTH_01383 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit SUTH_01383 PF10531 SLBB domain SUTH_01383 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region SUTH_01384 PF00384 Molybdopterin oxidoreductase SUTH_01384 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region SUTH_01384 PF13510 2Fe-2S iron-sulfur cluster binding domain SUTH_01385 PF00146 NADH dehydrogenase SUTH_01386 PF12838 4Fe-4S dicluster domain SUTH_01387 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 SUTH_01388 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L SUTH_01389 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains SUTH_01389 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus SUTH_01390 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains SUTH_01390 PF01059 SUTH_01390 SUTH_01391 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains SUTH_01392 PF00293 NUDIX domain SUTH_01393 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SUTH_01393 PF07730 Histidine kinase SUTH_01393 PF13185 GAF domain SUTH_01394 PF00072 Response regulator receiver domain SUTH_01394 PF00196 Bacterial regulatory proteins, luxR family SUTH_01395 PF01323 DSBA-like thioredoxin domain SUTH_01396 PF00107 Zinc-binding dehydrogenase SUTH_01396 PF08240 Alcohol dehydrogenase GroES-like domain SUTH_01397 PF00589 Phage integrase family SUTH_01397 PF13495 Phage integrase, N-terminal SAM-like domain SUTH_01398 PF00571 CBS domain SUTH_01399 PF01936 NYN domain SUTH_01403 PF01609 Transposase DDE domain SUTH_01403 PF05598 SUTH_01403 SUTH_01404 PF05015 Plasmid maintenance system killer protein SUTH_01405 PF01381 Helix-turn-helix SUTH_01406 PF05015 Plasmid maintenance system killer protein SUTH_01407 PF01381 Helix-turn-helix SUTH_01408 PF01266 FAD dependent oxidoreductase SUTH_01409 PF00501 AMP-binding enzyme SUTH_01409 PF13193 AMP-binding enzyme C-terminal domain SUTH_01410 PF04828 Glutathione-dependent formaldehyde-activating enzyme SUTH_01411 PF01738 Dienelactone hydrolase family SUTH_01412 PF01661 Macro domain SUTH_01413 PF13302 Acetyltransferase (GNAT) domain SUTH_01414 PF00805 Pentapeptide repeats (8 copies) SUTH_01415 PF12146 Putative lysophospholipase SUTH_01416 PF00656 Caspase domain SUTH_01417 PF04060 Putative Fe-S cluster SUTH_01417 PF12837 4Fe-4S binding domain SUTH_01418 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase SUTH_01418 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg SUTH_01418 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain SUTH_01418 PF13370 4Fe-4S single cluster domain SUTH_01418 PF17147 SUTH_01418 SUTH_01419 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit SUTH_01419 PF10531 SLBB domain SUTH_01419 PF13183 4Fe-4S dicluster domain SUTH_01419 PF13375 RnfC Barrel sandwich hybrid domain SUTH_01420 PF03116 SUTH_01420 SUTH_01421 PF04205 FMN-binding domain SUTH_01422 PF02508 SUTH_01422 SUTH_01423 PF02508 SUTH_01423 SUTH_01425 PF00175 Oxidoreductase NAD-binding domain SUTH_01426 PF13682 Chemoreceptor zinc-binding domain SUTH_01427 PF01814 Hemerythrin HHE cation binding domain SUTH_01428 PF01262 Alanine dehydrogenase/PNT, C-terminal domain SUTH_01428 PF05222 Alanine dehydrogenase/PNT, N-terminal domain SUTH_01429 PF00563 EAL domain SUTH_01429 PF08668 HDOD domain SUTH_01430 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases SUTH_01431 PF01521 Iron-sulphur cluster biosynthesis SUTH_01432 PF07685 CobB/CobQ-like glutamine amidotransferase domain SUTH_01432 PF13500 AAA domain SUTH_01433 PF03916 SUTH_01433 SUTH_01434 PF13247 4Fe-4S dicluster domain SUTH_01436 PF07992 Pyridine nucleotide-disulphide oxidoreductase SUTH_01436 PF13187 4Fe-4S dicluster domain SUTH_01436 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster SUTH_01437 PF02754 SUTH_01437 SUTH_01437 PF13534 4Fe-4S dicluster domain SUTH_01438 PF02665 Nitrate reductase gamma subunit SUTH_01439 PF04358 DsrC like protein SUTH_01440 PF04077 DsrH like protein SUTH_01441 PF02635 DsrE/DsrF-like family SUTH_01442 PF02635 DsrE/DsrF-like family SUTH_01443 PF01077 Nitrite and sulphite reductase 4Fe-4S domain SUTH_01443 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain SUTH_01444 PF01077 Nitrite and sulphite reductase 4Fe-4S domain SUTH_01444 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain SUTH_01446 PF09559 SUTH_01446 SUTH_01447 PF01206 Sulfurtransferase TusA SUTH_01448 PF04358 DsrC like protein SUTH_01450 PF02668 Taurine catabolism dioxygenase TauD, TfdA family SUTH_01451 PF08668 HDOD domain SUTH_01452 PF12706 Beta-lactamase superfamily domain SUTH_01453 PF07992 Pyridine nucleotide-disulphide oxidoreductase SUTH_01454 PF07848 PaaX-like protein SUTH_01454 PF08223 PaaX-like protein C-terminal domain SUTH_01455 PF05138 Phenylacetic acid catabolic protein SUTH_01458 PF01609 Transposase DDE domain SUTH_01458 PF05598 SUTH_01458 SUTH_01459 PF07722 Peptidase C26 SUTH_01460 PF04107 Glutamate-cysteine ligase family 2(GCS2) SUTH_01461 PF00999 Sodium/hydrogen exchanger family SUTH_01462 PF06305 SUTH_01462 SUTH_01463 PF00990 GGDEF domain SUTH_01464 PF05433 SUTH_01464 SUTH_01465 PF00072 Response regulator receiver domain SUTH_01465 PF14532 Sigma-54 interaction domain SUTH_01467 PF00512 His Kinase A (phospho-acceptor) domain SUTH_01467 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SUTH_01468 PF13237 4Fe-4S dicluster domain SUTH_01468 PF13738 Pyridine nucleotide-disulphide oxidoreductase SUTH_01469 PF09699 Doubled CXXCH motif (Paired_CXXCH_1) SUTH_01469 PF14522 Cytochrome c7 SUTH_01471 PF09699 Doubled CXXCH motif (Paired_CXXCH_1) SUTH_01472 PF01436 NHL repeat SUTH_01474 PF01436 NHL repeat SUTH_01475 PF09699 Doubled CXXCH motif (Paired_CXXCH_1) SUTH_01477 PF01435 Peptidase family M48 SUTH_01478 PF08668 HDOD domain SUTH_01479 PF01614 Bacterial transcriptional regulator SUTH_01479 PF09339 IclR helix-turn-helix domain SUTH_01480 PF10108 Predicted 3'-5' exonuclease related to the exonuclease domain of PolB SUTH_01481 PF00857 Isochorismatase family SUTH_01482 PF00441 Acyl-CoA dehydrogenase, C-terminal domain SUTH_01482 PF02770 Acyl-CoA dehydrogenase, middle domain SUTH_01482 PF02771 Acyl-CoA dehydrogenase, N-terminal domain SUTH_01482 PF12418 SUTH_01482 SUTH_01482 PF12806 SUTH_01482 SUTH_01483 PF00378 Enoyl-CoA hydratase/isomerase family SUTH_01483 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain SUTH_01483 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain SUTH_01484 PF00108 Thiolase, N-terminal domain SUTH_01484 PF02803 Thiolase, C-terminal domain SUTH_01485 PF00440 Bacterial regulatory proteins, tetR family SUTH_01486 PF01012 Electron transfer flavoprotein domain SUTH_01487 PF00766 Electron transfer flavoprotein FAD-binding domain SUTH_01487 PF01012 Electron transfer flavoprotein domain SUTH_01488 PF00441 Acyl-CoA dehydrogenase, C-terminal domain SUTH_01488 PF02770 Acyl-CoA dehydrogenase, middle domain SUTH_01488 PF02771 Acyl-CoA dehydrogenase, N-terminal domain SUTH_01488 PF12418 SUTH_01488 SUTH_01488 PF12806 SUTH_01488 SUTH_01489 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SUTH_01489 PF12729 SUTH_01489 SUTH_01490 PF05187 Electron transfer flavoprotein-ubiquinone oxidoreductase SUTH_01490 PF13450 NAD(P)-binding Rossmann-like domain SUTH_01491 PF13279 Thioesterase-like superfamily SUTH_01492 PF00501 AMP-binding enzyme SUTH_01492 PF13193 AMP-binding enzyme C-terminal domain SUTH_01492 PF16177 SUTH_01492 SUTH_01493 PF04378 Ribosomal RNA small subunit methyltransferase D, RsmJ SUTH_01494 PF00849 RNA pseudouridylate synthase SUTH_01494 PF01479 S4 domain SUTH_01495 PF08668 HDOD domain SUTH_01496 PF01250 Ribosomal protein S6 SUTH_01497 PF00436 Single-strand binding protein family SUTH_01498 PF01084 Ribosomal protein S18 SUTH_01499 PF01281 Ribosomal protein L9, N-terminal domain SUTH_01499 PF03948 Ribosomal protein L9, C-terminal domain SUTH_01500 PF00772 DnaB-like helicase N terminal domain SUTH_01500 PF03796 DnaB-like helicase C terminal domain SUTH_01501 PF02562 PhoH-like protein SUTH_01501 PF13638 PIN domain SUTH_01502 PF00578 AhpC/TSA family SUTH_01504 PF01370 NAD dependent epimerase/dehydratase family SUTH_01505 PF00551 Formyl transferase SUTH_01505 PF02911 Formyl transferase, C-terminal domain SUTH_01506 PF00535 Glycosyl transferase family 2 SUTH_01507 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family SUTH_01508 PF00893 Small Multidrug Resistance protein SUTH_01509 PF13231 SUTH_01509 SUTH_01510 PF04430 Protein of unknown function (DUF498/DUF598) SUTH_01511 PF00155 Aminotransferase class I and II SUTH_01512 PF00583 Acetyltransferase (GNAT) family SUTH_01513 PF00742 Homoserine dehydrogenase SUTH_01513 PF01842 ACT domain SUTH_01513 PF03447 Homoserine dehydrogenase, NAD binding domain SUTH_01516 PF00291 Pyridoxal-phosphate dependent enzyme SUTH_01516 PF14821 Threonine synthase N terminus SUTH_01518 PF00521 DNA gyrase/topoisomerase IV, subunit A SUTH_01518 PF03989 DNA gyrase C-terminal domain, beta-propeller SUTH_01519 PF00204 DNA gyrase B SUTH_01519 PF00986 DNA gyrase B subunit, carboxyl terminus SUTH_01519 PF01751 Toprim domain SUTH_01519 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SUTH_01520 PF04321 RmlD substrate binding domain SUTH_01521 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase SUTH_01522 PF00483 Nucleotidyl transferase SUTH_01523 PF16363 SUTH_01523 SUTH_01524 PF00724 NADH:flavin oxidoreductase / NADH oxidase family SUTH_01524 PF01494 FAD binding domain SUTH_01525 PF00378 Enoyl-CoA hydratase/isomerase family SUTH_01526 PF00441 Acyl-CoA dehydrogenase, C-terminal domain SUTH_01526 PF02770 Acyl-CoA dehydrogenase, middle domain SUTH_01526 PF02771 Acyl-CoA dehydrogenase, N-terminal domain SUTH_01527 PF01042 Endoribonuclease L-PSP SUTH_01528 PF00561 alpha/beta hydrolase fold SUTH_01529 PF02811 PHP domain SUTH_01530 PF01300 Telomere recombination SUTH_01531 PF02163 Peptidase family M50 SUTH_01532 PF00579 tRNA synthetases class I (W and Y) SUTH_01533 PF02616 ScpA/B protein SUTH_01534 PF04079 Putative transcriptional regulators (Ypuh-like) SUTH_01535 PF00849 RNA pseudouridylate synthase SUTH_01535 PF01479 S4 domain SUTH_01536 PF02576 Uncharacterised BCR, YhbC family COG0779 SUTH_01536 PF17384 SUTH_01536 SUTH_01537 PF00575 S1 RNA binding domain SUTH_01537 PF08529 NusA N-terminal domain SUTH_01537 PF13184 NusA-like KH domain SUTH_01537 PF14520 Helix-hairpin-helix domain SUTH_01538 PF00009 Elongation factor Tu GTP binding domain SUTH_01538 PF04760 Translation initiation factor IF-2, N-terminal region SUTH_01538 PF08364 SUTH_01538 SUTH_01538 PF11987 Translation-initiation factor 2 SUTH_01539 PF02033 Ribosome-binding factor A SUTH_01540 PF01509 TruB family pseudouridylate synthase (N terminal domain) SUTH_01540 PF09157 Pseudouridine synthase II TruB, C-terminal SUTH_01540 PF16198 SUTH_01540 SUTH_01541 PF00312 Ribosomal protein S15 SUTH_01542 PF00013 KH domain SUTH_01542 PF00575 S1 RNA binding domain SUTH_01542 PF01138 3' exoribonuclease family, domain 1 SUTH_01542 PF03725 3' exoribonuclease family, domain 2 SUTH_01542 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain SUTH_01543 PF01258 Prokaryotic dksA/traR C4-type zinc finger SUTH_01545 PF01844 HNH endonuclease SUTH_01548 PF01575 MaoC like domain SUTH_01549 PF00300 Histidine phosphatase superfamily (branch 1) SUTH_01551 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain SUTH_01551 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain SUTH_01552 PF01645 Conserved region in glutamate synthase SUTH_01553 PF00892 EamA-like transporter family SUTH_01554 PF01256 Carbohydrate kinase SUTH_01554 PF03853 YjeF-related protein N-terminus SUTH_01555 PF00291 Pyridoxal-phosphate dependent enzyme SUTH_01556 PF00817 impB/mucB/samB family SUTH_01556 PF11798 IMS family HHH motif SUTH_01556 PF11799 impB/mucB/samB family C-terminal domain SUTH_01557 PF01546 Peptidase family M20/M25/M40 SUTH_01557 PF07687 Peptidase dimerisation domain SUTH_01558 PF01613 Flavin reductase like domain SUTH_01559 PF03741 SUTH_01559 SUTH_01560 PF01569 PAP2 superfamily SUTH_01561 PF01219 Prokaryotic diacylglycerol kinase SUTH_01562 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SUTH_01562 PF03466 LysR substrate binding domain SUTH_01566 PF01132 Elongation factor P (EF-P) OB domain SUTH_01566 PF08207 Elongation factor P (EF-P) KOW-like domain SUTH_01566 PF09285 Elongation factor P, C-terminal SUTH_01567 PF10093 SUTH_01567 SUTH_01568 PF03167 Uracil DNA glycosylase superfamily SUTH_01569 PF01541 GIY-YIG catalytic domain SUTH_01569 PF02151 UvrB/uvrC motif SUTH_01569 PF08459 UvrC Helix-hairpin-helix N-terminal SUTH_01569 PF14520 Helix-hairpin-helix domain SUTH_01570 PF01066 CDP-alcohol phosphatidyltransferase SUTH_01574 PF00589 Phage integrase family SUTH_01574 PF13356 Domain of unknown function (DUF4102) SUTH_01575 PF13328 HD domain SUTH_01577 PF05015 Plasmid maintenance system killer protein SUTH_01578 PF01381 Helix-turn-helix SUTH_01582 PF05930 Prophage CP4-57 regulatory protein (AlpA) SUTH_01584 PF13730 SUTH_01584 SUTH_01585 PF00772 DnaB-like helicase N terminal domain SUTH_01585 PF03796 DnaB-like helicase C terminal domain SUTH_01587 PF00583 Acetyltransferase (GNAT) family SUTH_01593 PF02229 Transcriptional Coactivator p15 (PC4) SUTH_01596 PF06676 SUTH_01596 SUTH_01598 PF00488 MutS domain V SUTH_01598 PF01624 MutS domain I SUTH_01598 PF05188 MutS domain II SUTH_01598 PF05190 MutS family domain IV SUTH_01598 PF05192 MutS domain III SUTH_01599 PF00459 Inositol monophosphatase family SUTH_01600 PF00588 SpoU rRNA Methylase family SUTH_01601 PF00132 Bacterial transferase hexapeptide (six repeats) SUTH_01601 PF06426 Serine acetyltransferase, N-terminal SUTH_01602 PF02082 Transcriptional regulator SUTH_01603 PF00266 Aminotransferase class-V SUTH_01604 PF00266 Aminotransferase class-V SUTH_01605 PF01592 NifU-like N terminal domain SUTH_01606 PF01521 Iron-sulphur cluster biosynthesis SUTH_01607 PF00226 DnaJ domain SUTH_01607 PF07743 HSCB C-terminal oligomerisation domain SUTH_01608 PF00012 Hsp70 protein SUTH_01609 PF00111 2Fe-2S iron-sulfur cluster binding domain SUTH_01610 PF04384 Iron-sulphur cluster assembly SUTH_01611 PF01026 TatD related DNase SUTH_01612 PF08534 Redoxin SUTH_01613 PF00009 Elongation factor Tu GTP binding domain SUTH_01613 PF00679 Elongation factor G C-terminus SUTH_01613 PF03144 Elongation factor Tu domain 2 SUTH_01614 PF01048 Phosphorylase superfamily SUTH_01615 PF01327 Polypeptide deformylase SUTH_01617 PF00990 GGDEF domain SUTH_01617 PF02743 Cache domain SUTH_01619 PF13380 CoA binding domain SUTH_01619 PF13607 Succinyl-CoA ligase like flavodoxin domain SUTH_01620 PF07848 PaaX-like protein SUTH_01620 PF08223 PaaX-like protein C-terminal domain SUTH_01621 PF02634 FdhD/NarQ family SUTH_01622 PF00384 Molybdopterin oxidoreductase SUTH_01622 PF01568 Molydopterin dinucleotide binding domain SUTH_01623 PF13247 4Fe-4S dicluster domain SUTH_01624 PF04976 SUTH_01624 SUTH_01625 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase SUTH_01626 PF00037 4Fe-4S binding domain SUTH_01627 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg SUTH_01627 PF17147 SUTH_01627 SUTH_01628 PF07992 Pyridine nucleotide-disulphide oxidoreductase SUTH_01629 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain SUTH_01629 PF12837 4Fe-4S binding domain SUTH_01629 PF13247 4Fe-4S dicluster domain SUTH_01630 PF00501 AMP-binding enzyme SUTH_01630 PF14535 AMP-binding enzyme C-terminal domain SUTH_01631 PF03480 Bacterial extracellular solute-binding protein, family 7 SUTH_01632 PF04290 SUTH_01632 SUTH_01633 PF06808 SUTH_01633 SUTH_01635 PF08240 Alcohol dehydrogenase GroES-like domain SUTH_01635 PF13602 Zinc-binding dehydrogenase SUTH_01636 PF01381 Helix-turn-helix SUTH_01637 PF09907 SUTH_01637 SUTH_01639 PF13304 AAA domain SUTH_01640 PF13707 SUTH_01640 SUTH_01641 PF00037 4Fe-4S binding domain SUTH_01641 PF00175 Oxidoreductase NAD-binding domain SUTH_01641 PF00970 Oxidoreductase FAD-binding domain SUTH_01643 PF00378 Enoyl-CoA hydratase/isomerase family SUTH_01644 PF01202 Shikimate kinase SUTH_01644 PF13560 Helix-turn-helix domain SUTH_01645 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component SUTH_01646 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component SUTH_01647 PF01869 BadF/BadG/BcrA/BcrD ATPase family SUTH_01648 PF01869 BadF/BadG/BcrA/BcrD ATPase family SUTH_01649 PF12797 4Fe-4S binding domain SUTH_01651 PF00583 Acetyltransferase (GNAT) family SUTH_01652 PF02811 PHP domain SUTH_01652 PF13263 PHP-associated SUTH_01653 PF00037 4Fe-4S binding domain SUTH_01653 PF07992 Pyridine nucleotide-disulphide oxidoreductase SUTH_01653 PF13510 2Fe-2S iron-sulfur cluster binding domain SUTH_01653 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster SUTH_01654 PF00378 Enoyl-CoA hydratase/isomerase family SUTH_01655 PF00107 Zinc-binding dehydrogenase SUTH_01655 PF08240 Alcohol dehydrogenase GroES-like domain SUTH_01656 PF00378 Enoyl-CoA hydratase/isomerase family SUTH_01657 PF13561 Enoyl-(Acyl carrier protein) reductase SUTH_01658 PF00441 Acyl-CoA dehydrogenase, C-terminal domain SUTH_01658 PF02770 Acyl-CoA dehydrogenase, middle domain SUTH_01658 PF02771 Acyl-CoA dehydrogenase, N-terminal domain SUTH_01659 PF00501 AMP-binding enzyme SUTH_01659 PF13193 AMP-binding enzyme C-terminal domain SUTH_01660 PF13458 Periplasmic binding protein SUTH_01661 PF02653 SUTH_01661 SUTH_01662 PF02653 SUTH_01662 SUTH_01663 PF00005 ABC transporter SUTH_01663 PF12399 Branched-chain amino acid ATP-binding cassette transporter SUTH_01664 PF00005 ABC transporter SUTH_01665 PF12697 Alpha/beta hydrolase family SUTH_01666 PF03061 Thioesterase superfamily SUTH_01667 PF07311 Dodecin SUTH_01668 PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 SUTH_01668 PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain SUTH_01669 PF01047 MarR family SUTH_01670 PF00501 AMP-binding enzyme SUTH_01670 PF14535 AMP-binding enzyme C-terminal domain SUTH_01671 PF02441 Flavoprotein SUTH_01672 PF01243 Pyridoxamine 5'-phosphate oxidase SUTH_01673 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily SUTH_01674 PF07927 YcfA-like protein SUTH_01678 PF13181 Tetratricopeptide repeat SUTH_01678 PF13424 Tetratricopeptide repeat SUTH_01678 PF13432 Tetratricopeptide repeat SUTH_01680 PF00111 2Fe-2S iron-sulfur cluster binding domain SUTH_01681 PF05175 Methyltransferase small domain SUTH_01682 PF01546 Peptidase family M20/M25/M40 SUTH_01682 PF07687 Peptidase dimerisation domain SUTH_01683 PF00437 Type II/IV secretion system protein SUTH_01684 PF00132 Bacterial transferase hexapeptide (six repeats) SUTH_01684 PF14602 Hexapeptide repeat of succinyl-transferase SUTH_01684 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal SUTH_01685 PF00155 Aminotransferase class I and II SUTH_01686 PF01738 Dienelactone hydrolase family SUTH_01687 PF12796 Ankyrin repeats (3 copies) SUTH_01688 PF05014 Nucleoside 2-deoxyribosyltransferase SUTH_01689 PF07152 YaeQ protein SUTH_01690 PF00491 Arginase family SUTH_01696 PF13020 SUTH_01696 SUTH_01697 PF12762 SUTH_01697 SUTH_01699 PF12161 HsdM N-terminal domain SUTH_01701 PF03831 PhnA protein SUTH_01701 PF08274 PhnA Zinc-Ribbon SUTH_01706 PF00155 Aminotransferase class I and II SUTH_01707 PF00271 Helicase conserved C-terminal domain SUTH_01707 PF02151 UvrB/uvrC motif SUTH_01707 PF04851 Type III restriction enzyme, res subunit SUTH_01707 PF12344 Ultra-violet resistance protein B SUTH_01708 PF01451 Low molecular weight phosphotyrosine protein phosphatase SUTH_01709 PF00575 S1 RNA binding domain SUTH_01709 PF10150 Ribonuclease E/G family SUTH_01710 PF00849 RNA pseudouridylate synthase SUTH_01710 PF01479 S4 domain SUTH_01711 PF13419 Haloacid dehalogenase-like hydrolase SUTH_01712 PF00355 Rieske [2Fe-2S] domain SUTH_01713 PF01343 Peptidase family S49 SUTH_01714 PF02503 Polyphosphate kinase middle domain SUTH_01714 PF13089 Polyphosphate kinase N-terminal domain SUTH_01714 PF13090 Polyphosphate kinase C-terminal domain SUTH_01715 PF02541 Ppx/GppA phosphatase family SUTH_01716 PF02405 SUTH_01716 SUTH_01717 PF00005 ABC transporter SUTH_01718 PF02470 SUTH_01718 SUTH_01719 PF03886 Protein of unknown function (DUF330) SUTH_01720 PF00501 AMP-binding enzyme SUTH_01720 PF13193 AMP-binding enzyme C-terminal domain SUTH_01721 PF01804 Penicillin amidase SUTH_01722 PF00378 Enoyl-CoA hydratase/isomerase family SUTH_01723 PF00501 AMP-binding enzyme SUTH_01723 PF00550 Phosphopantetheine attachment site SUTH_01723 PF01553 Acyltransferase SUTH_01724 PF11700 SUTH_01724 SUTH_01726 PF00005 ABC transporter SUTH_01726 PF12399 Branched-chain amino acid ATP-binding cassette transporter SUTH_01727 PF00005 ABC transporter SUTH_01728 PF13458 Periplasmic binding protein SUTH_01729 PF02653 SUTH_01729 SUTH_01730 PF02653 SUTH_01730 SUTH_01731 PF02600 Disulfide bond formation protein DsbB SUTH_01732 PF01323 DSBA-like thioredoxin domain SUTH_01733 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SUTH_01733 PF03466 LysR substrate binding domain SUTH_01734 PF03328 HpcH/HpaI aldolase/citrate lyase family SUTH_01735 PF00072 Response regulator receiver domain SUTH_01735 PF11849 SUTH_01735 SUTH_01735 PF13487 HD domain SUTH_01736 PF00171 Aldehyde dehydrogenase family SUTH_01737 PF04519 SUTH_01737 SUTH_01738 PF14489 QueF-like protein SUTH_01739 PF02463 RecF/RecN/SMC N terminal domain SUTH_01740 PF04354 ZipA, C-terminal FtsZ-binding domain SUTH_01741 PF00533 BRCA1 C Terminus (BRCT) domain SUTH_01741 PF01653 NAD-dependent DNA ligase adenylation domain SUTH_01741 PF03119 NAD-dependent DNA ligase C4 zinc finger domain SUTH_01741 PF03120 NAD-dependent DNA ligase OB-fold domain SUTH_01741 PF12826 Helix-hairpin-helix motif SUTH_01742 PF00483 Nucleotidyl transferase SUTH_01743 PF00156 Phosphoribosyl transferase domain SUTH_01744 PF00216 Bacterial DNA-binding protein SUTH_01745 PF00563 EAL domain SUTH_01745 PF00990 GGDEF domain SUTH_01745 PF13426 PAS domain SUTH_01745 PF17149 SUTH_01745 SUTH_01747 PF06245 SUTH_01747 SUTH_01748 PF00793 DAHP synthetase I family SUTH_01749 PF00990 GGDEF domain SUTH_01750 PF00270 DEAD/DEAH box helicase SUTH_01750 PF00271 Helicase conserved C-terminal domain SUTH_01750 PF02559 CarD-like/TRCF domain SUTH_01750 PF03461 TRCF domain SUTH_01751 PF10003 SUTH_01751 SUTH_01752 PF00116 Cytochrome C oxidase subunit II, periplasmic domain SUTH_01752 PF02790 Cytochrome C oxidase subunit II, transmembrane domain SUTH_01752 PF13442 Cytochrome C oxidase, cbb3-type, subunit III SUTH_01753 PF00115 Cytochrome C and Quinol oxidase polypeptide I SUTH_01754 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 SUTH_01755 PF00510 Cytochrome c oxidase subunit III SUTH_01756 PF11137 SUTH_01756 SUTH_01757 PF02104 SUTH_01757 SUTH_01758 PF01544 CorA-like Mg2+ transporter protein SUTH_01759 PF00072 Response regulator receiver domain SUTH_01759 PF00512 His Kinase A (phospho-acceptor) domain SUTH_01759 PF00989 PAS fold SUTH_01759 PF01627 Hpt domain SUTH_01759 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SUTH_01759 PF11845 SUTH_01759 SUTH_01761 PF00512 His Kinase A (phospho-acceptor) domain SUTH_01761 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SUTH_01761 PF13492 GAF domain SUTH_01761 PF13493 Domain of unknown function (DUF4118) SUTH_01762 PF00072 Response regulator receiver domain SUTH_01762 PF00486 Transcriptional regulatory protein, C terminal SUTH_01763 PF02705 SUTH_01763 SUTH_01764 PF07883 Cupin domain SUTH_01767 PF00999 Sodium/hydrogen exchanger family SUTH_01767 PF02254 TrkA-N domain SUTH_01768 PF00582 Universal stress protein family SUTH_01768 PF00999 Sodium/hydrogen exchanger family SUTH_01768 PF02254 TrkA-N domain SUTH_01769 PF05598 SUTH_01769 SUTH_01769 PF13751 SUTH_01769 SUTH_01770 PF04055 Radical SAM superfamily SUTH_01771 PF01871 AMMECR1 SUTH_01771 PF01875 Memo-like protein SUTH_01772 PF00027 Cyclic nucleotide-binding domain SUTH_01772 PF12706 Beta-lactamase superfamily domain SUTH_01773 PF02308 SUTH_01773 SUTH_01773 PF13194 SUTH_01773 SUTH_01774 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase SUTH_01775 PF02542 YgbB family SUTH_01776 PF02834 LigT like Phosphoesterase SUTH_01777 PF00027 Cyclic nucleotide-binding domain SUTH_01778 PF01594 SUTH_01778 SUTH_01779 PF01609 Transposase DDE domain SUTH_01779 PF05598 SUTH_01779 SUTH_01780 PF01152 Bacterial-like globin SUTH_01781 PF00512 His Kinase A (phospho-acceptor) domain SUTH_01781 PF00672 HAMP domain SUTH_01781 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SUTH_01781 PF16524 SUTH_01781 SUTH_01782 PF00072 Response regulator receiver domain SUTH_01782 PF00486 Transcriptional regulatory protein, C terminal SUTH_01786 PF11154 SUTH_01786 SUTH_01787 PF00011 Hsp20/alpha crystallin family SUTH_01788 PF00989 PAS fold SUTH_01788 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SUTH_01788 PF07730 Histidine kinase SUTH_01788 PF08447 PAS fold SUTH_01789 PF00072 Response regulator receiver domain SUTH_01789 PF00196 Bacterial regulatory proteins, luxR family SUTH_01790 PF00990 GGDEF domain SUTH_01792 PF13801 Heavy-metal resistance SUTH_01793 PF13490 Putative zinc-finger SUTH_01794 PF04542 Sigma-70 region 2 SUTH_01794 PF08281 Sigma-70, region 4 SUTH_01795 PF12843 SUTH_01795 SUTH_01796 PF00330 Aconitase family (aconitate hydratase) SUTH_01796 PF06434 Aconitate hydratase 2 N-terminus SUTH_01796 PF11791 Aconitate B N-terminal domain SUTH_01797 PF03328 HpcH/HpaI aldolase/citrate lyase family SUTH_01798 PF00056 lactate/malate dehydrogenase, NAD binding domain SUTH_01798 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain SUTH_01799 PF00392 Bacterial regulatory proteins, gntR family SUTH_01799 PF07702 UTRA domain SUTH_01800 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit SUTH_01801 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit SUTH_01802 PF00890 FAD binding domain SUTH_01802 PF02910 Fumarate reductase flavoprotein C-term SUTH_01803 PF13085 2Fe-2S iron-sulfur cluster binding domain SUTH_01803 PF13534 4Fe-4S dicluster domain SUTH_01804 PF03937 Flavinator of succinate dehydrogenase SUTH_01805 PF00285 Citrate synthase SUTH_01806 PF00676 Dehydrogenase E1 component SUTH_01806 PF02779 Transketolase, pyrimidine binding domain SUTH_01806 PF16078 SUTH_01806 SUTH_01806 PF16870 SUTH_01806 SUTH_01807 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) SUTH_01807 PF00364 Biotin-requiring enzyme SUTH_01807 PF02817 e3 binding domain SUTH_01808 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain SUTH_01808 PF07992 Pyridine nucleotide-disulphide oxidoreductase SUTH_01809 PF03969 AFG1-like ATPase SUTH_01810 PF00578 AhpC/TSA family SUTH_01811 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase SUTH_01813 PF00027 Cyclic nucleotide-binding domain SUTH_01814 PF00005 ABC transporter SUTH_01814 PF00664 ABC transporter transmembrane region SUTH_01814 PF03412 Peptidase C39 family SUTH_01815 PF13443 Cro/C1-type HTH DNA-binding domain SUTH_01816 PF07927 YcfA-like protein SUTH_01817 PF13437 HlyD family secretion protein SUTH_01817 PF13533 Biotin-lipoyl like SUTH_01819 PF00353 Hemolysin-type calcium-binding repeat (2 copies) SUTH_01819 PF05345 Putative Ig domain SUTH_01819 PF06594 SUTH_01819 SUTH_01820 PF08681 Protein of unknown function (DUF1778) SUTH_01821 PF13673 Acetyltransferase (GNAT) domain SUTH_01822 PF00664 ABC transporter transmembrane region SUTH_01823 PF01526 SUTH_01823 SUTH_01823 PF13700 SUTH_01823 SUTH_01824 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SUTH_01827 PF00072 Response regulator receiver domain SUTH_01830 PF00072 Response regulator receiver domain SUTH_01830 PF00486 Transcriptional regulatory protein, C terminal SUTH_01831 PF00512 His Kinase A (phospho-acceptor) domain SUTH_01831 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SUTH_01831 PF13188 PAS domain SUTH_01832 PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein SUTH_01833 PF00512 His Kinase A (phospho-acceptor) domain SUTH_01833 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SUTH_01833 PF03924 CHASE domain SUTH_01833 PF05231 SUTH_01833 SUTH_01833 PF08448 PAS fold SUTH_01834 PF00512 His Kinase A (phospho-acceptor) domain SUTH_01834 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SUTH_01834 PF12860 SUTH_01834 SUTH_01835 PF00072 Response regulator receiver domain SUTH_01836 PF00563 EAL domain SUTH_01836 PF00989 PAS fold SUTH_01836 PF00990 GGDEF domain SUTH_01836 PF13426 PAS domain SUTH_01837 PF00072 Response regulator receiver domain SUTH_01839 PF00072 Response regulator receiver domain SUTH_01839 PF12728 Helix-turn-helix domain SUTH_01840 PF01844 HNH endonuclease SUTH_01841 PF00589 Phage integrase family SUTH_01844 PF00899 ThiF family SUTH_01844 PF14457 SUTH_01844 SUTH_01844 PF14464 Prokaryotic homologs of the JAB domain SUTH_01845 PF01734 Patatin-like phospholipase SUTH_01846 PF11740 SUTH_01846 SUTH_01847 PF00005 ABC transporter SUTH_01848 PF00023 Ankyrin repeat SUTH_01848 PF12796 Ankyrin repeats (3 copies) SUTH_01849 PF01026 TatD related DNase SUTH_01850 PF13177 DNA polymerase III, delta subunit SUTH_01851 PF02223 Thymidylate kinase SUTH_01852 PF02618 YceG-like family SUTH_01853 PF01571 Aminomethyltransferase folate-binding domain SUTH_01853 PF08669 Glycine cleavage T-protein C-terminal barrel domain SUTH_01854 PF05742 SUTH_01854 SUTH_01855 PF03734 L,D-transpeptidase catalytic domain SUTH_01855 PF13673 Acetyltransferase (GNAT) domain SUTH_01856 PF14437 SUTH_01856 SUTH_01857 PF00391 PEP-utilising enzyme, mobile domain SUTH_01857 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain SUTH_01857 PF02896 PEP-utilising enzyme, TIM barrel domain SUTH_01858 PF12796 Ankyrin repeats (3 copies) SUTH_01859 PF00929 Exonuclease SUTH_01861 PF13560 Helix-turn-helix domain SUTH_01862 PF07804 HipA-like C-terminal domain SUTH_01862 PF13657 HipA N-terminal domain SUTH_01863 PF13560 Helix-turn-helix domain SUTH_01864 PF00216 Bacterial DNA-binding protein SUTH_01866 PF06986 SUTH_01866 SUTH_01870 PF09673 SUTH_01870 SUTH_01871 PF06834 SUTH_01871 SUTH_01872 PF12477 SUTH_01872 SUTH_01873 PF02586 Uncharacterised ACR, COG2135 SUTH_01876 PF01807 CHC2 zinc finger SUTH_01877 PF05028 Poly (ADP-ribose) glycohydrolase (PARG) SUTH_01878 PF10117 SUTH_01878 SUTH_01879 PF07728 AAA domain (dynein-related subfamily) SUTH_01881 PF08238 Sel1 repeat SUTH_01883 PF01435 Peptidase family M48 SUTH_01885 PF08238 Sel1 repeat SUTH_01887 PF01661 Macro domain SUTH_01887 PF03747 ADP-ribosylglycohydrolase SUTH_01888 PF02146 Sir2 family SUTH_01889 PF00092 von Willebrand factor type A domain SUTH_01891 PF08279 HTH domain SUTH_01891 PF13280 SUTH_01891 SUTH_01892 PF07514 Putative helicase SUTH_01893 PF10502 Signal peptidase, peptidase S26 SUTH_01894 PF01906 Putative heavy-metal-binding SUTH_01896 PF07916 SUTH_01896 SUTH_01897 PF06122 SUTH_01897 SUTH_01898 PF13728 F plasmid transfer operon protein SUTH_01900 PF11130 SUTH_01900 SUTH_01900 PF12846 AAA-like domain SUTH_01901 PF09676 SUTH_01901 SUTH_01902 PF10411 Disulfide bond isomerase protein N-terminus SUTH_01902 PF13098 Thioredoxin-like domain SUTH_01903 PF03743 Bacterial conjugation TrbI-like protein SUTH_01904 PF06586 SUTH_01904 SUTH_01905 PF05309 SUTH_01905 SUTH_01906 PF07178 SUTH_01906 SUTH_01908 PF00691 OmpA family SUTH_01909 PF01464 Transglycosylase SLT domain SUTH_01910 PF08378 SUTH_01910 SUTH_01911 PF13175 AAA ATPase domain SUTH_01912 PF13245 Part of AAA domain SUTH_01913 PF14348 SUTH_01913 SUTH_01914 PF10412 Type IV secretion-system coupling protein DNA-binding domain SUTH_01914 PF12696 TraM recognition site of TraD and TraG SUTH_01916 PF04796 SUTH_01916 SUTH_01917 PF00580 UvrD/REP helicase N-terminal domain SUTH_01917 PF01396 SUTH_01917 SUTH_01917 PF13361 UvrD-like helicase C-terminal domain SUTH_01920 PF05014 Nucleoside 2-deoxyribosyltransferase SUTH_01921 PF00717 Peptidase S24-like SUTH_01922 PF00717 Peptidase S24-like SUTH_01923 PF00817 impB/mucB/samB family SUTH_01923 PF11799 impB/mucB/samB family C-terminal domain SUTH_01923 PF13438 SUTH_01923 SUTH_01925 PF00565 Staphylococcal nuclease homologue SUTH_01928 PF06406 StbA protein SUTH_01929 PF05280 Flagellar transcriptional activator (FlhC) SUTH_01930 PF05247 Flagellar transcriptional activator (FlhD) SUTH_01931 PF00717 Peptidase S24-like SUTH_01931 PF13443 Cro/C1-type HTH DNA-binding domain SUTH_01932 PF13676 TIR domain SUTH_01933 PF13676 TIR domain SUTH_01935 PF08937 MTH538 TIR-like domain (DUF1863) SUTH_01936 PF13676 TIR domain SUTH_01937 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) SUTH_01937 PF04851 Type III restriction enzyme, res subunit SUTH_01937 PF11867 SUTH_01937 SUTH_01938 PF14355 SUTH_01938 SUTH_01939 PF01420 Type I restriction modification DNA specificity domain SUTH_01940 PF02384 N-6 DNA Methylase SUTH_01940 PF12161 HsdM N-terminal domain SUTH_01941 PF13280 SUTH_01941 SUTH_01942 PF04002 RadC-like JAB domain SUTH_01945 PF08273 Zinc-binding domain of primase-helicase SUTH_01945 PF13362 Toprim domain SUTH_01946 PF04851 Type III restriction enzyme, res subunit SUTH_01949 PF00899 ThiF family SUTH_01950 PF09436 SUTH_01950 SUTH_01950 PF14464 Prokaryotic homologs of the JAB domain SUTH_01951 PF14460 SUTH_01951 SUTH_01952 PF14456 SUTH_01952 SUTH_01953 PF14454 SUTH_01953 SUTH_01955 PF02195 ParB-like nuclease domain SUTH_01955 PF02954 Bacterial regulatory protein, Fis family SUTH_01958 PF03837 SUTH_01958 SUTH_01959 PF12684 PDDEXK-like domain of unknown function (DUF3799) SUTH_01962 PF00436 Single-strand binding protein family SUTH_01964 PF00216 Bacterial DNA-binding protein SUTH_01966 PF01479 S4 domain SUTH_01967 PF12843 SUTH_01967 SUTH_01968 PF05930 Prophage CP4-57 regulatory protein (AlpA) SUTH_01969 PF00589 Phage integrase family SUTH_01969 PF13356 Domain of unknown function (DUF4102) SUTH_01969 PF14659 Phage integrase, N-terminal SAM-like domain SUTH_01970 PF00117 Glutamine amidotransferase class-I SUTH_01970 PF00958 GMP synthase C terminal domain SUTH_01970 PF02540 NAD synthase SUTH_01971 PF00478 IMP dehydrogenase / GMP reductase domain SUTH_01971 PF00571 CBS domain SUTH_01972 PF03658 RnfH family Ubiquitin SUTH_01973 PF03364 Polyketide cyclase / dehydrase and lipid transport SUTH_01974 PF01668 SmpB protein SUTH_01975 PF07690 Major Facilitator Superfamily SUTH_01976 PF13679 SUTH_01976 SUTH_01977 PF01936 NYN domain SUTH_01978 PF00270 DEAD/DEAH box helicase SUTH_01978 PF00271 Helicase conserved C-terminal domain SUTH_01978 PF00570 HRDC domain SUTH_01978 PF09382 RQC domain SUTH_01978 PF16124 SUTH_01978 SUTH_01979 PF03060 Nitronate monooxygenase SUTH_01980 PF00291 Pyridoxal-phosphate dependent enzyme SUTH_01981 PF01370 NAD dependent epimerase/dehydratase family SUTH_01982 PF00294 pfkB family carbohydrate kinase SUTH_01983 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain SUTH_01983 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain SUTH_01983 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain SUTH_01984 PF13432 Tetratricopeptide repeat SUTH_01985 PF06305 SUTH_01985 SUTH_01986 PF00216 Bacterial DNA-binding protein SUTH_01987 PF00575 S1 RNA binding domain SUTH_01988 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) SUTH_01988 PF02224 Cytidylate kinase SUTH_01989 PF02153 Prephenate dehydrogenase SUTH_01990 PF00155 Aminotransferase class I and II SUTH_01991 PF00800 Prephenate dehydratase SUTH_01991 PF01817 Chorismate mutase type II SUTH_01991 PF01842 ACT domain SUTH_01992 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain SUTH_01992 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain SUTH_01993 PF00266 Aminotransferase class-V SUTH_01994 PF00521 DNA gyrase/topoisomerase IV, subunit A SUTH_01994 PF03989 DNA gyrase C-terminal domain, beta-propeller SUTH_01995 PF01979 Amidohydrolase family SUTH_01996 PF00691 OmpA family SUTH_01997 PF13489 Methyltransferase domain SUTH_01998 PF13419 Haloacid dehalogenase-like hydrolase SUTH_02001 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SUTH_02001 PF07730 Histidine kinase SUTH_02002 PF00072 Response regulator receiver domain SUTH_02002 PF00196 Bacterial regulatory proteins, luxR family SUTH_02003 PF00990 GGDEF domain SUTH_02004 PF00571 CBS domain SUTH_02005 PF00069 Protein kinase domain SUTH_02005 PF01590 GAF domain SUTH_02005 PF08668 HDOD domain SUTH_02006 PF04325 Protein of unknown function (DUF465) SUTH_02007 PF01053 Cys/Met metabolism PLP-dependent enzyme SUTH_02008 PF12697 Alpha/beta hydrolase family SUTH_02009 PF09955 SUTH_02009 SUTH_02010 PF07690 Major Facilitator Superfamily SUTH_02011 PF07947 SUTH_02011 SUTH_02012 PF00990 GGDEF domain SUTH_02012 PF03924 CHASE domain SUTH_02014 PF00374 Nickel-dependent hydrogenase SUTH_02015 PF00512 His Kinase A (phospho-acceptor) domain SUTH_02015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SUTH_02015 PF13426 PAS domain SUTH_02016 PF14083 SUTH_02016 SUTH_02017 PF00374 Nickel-dependent hydrogenase SUTH_02018 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit SUTH_02018 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal SUTH_02019 PF00072 Response regulator receiver domain SUTH_02019 PF00158 Sigma-54 interaction domain SUTH_02019 PF02954 Bacterial regulatory protein, Fis family SUTH_02020 PF00378 Enoyl-CoA hydratase/isomerase family SUTH_02020 PF00551 Formyl transferase SUTH_02020 PF02911 Formyl transferase, C-terminal domain SUTH_02021 PF00586 AIR synthase related protein, N-terminal domain SUTH_02021 PF02769 AIR synthase related protein, C-terminal domain SUTH_02022 PF01924 Hydrogenase formation hypA family SUTH_02023 PF01455 HupF/HypC family SUTH_02025 PF02492 CobW/HypB/UreG, nucleotide-binding domain SUTH_02026 PF01155 Hydrogenase expression/synthesis hypA family SUTH_02028 PF11939 Protein of unknown function (DUF3457) SUTH_02029 PF01455 HupF/HypC family SUTH_02030 PF01750 Hydrogenase maturation protease SUTH_02031 PF00374 Nickel-dependent hydrogenase SUTH_02032 PF03916 SUTH_02032 SUTH_02033 PF12800 4Fe-4S binding domain SUTH_02033 PF13247 4Fe-4S dicluster domain SUTH_02034 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit SUTH_02034 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal SUTH_02035 PF07690 Major Facilitator Superfamily SUTH_02036 PF09828 SUTH_02036 SUTH_02037 PF02417 SUTH_02037 SUTH_02038 PF09828 SUTH_02038 SUTH_02040 PF09905 Uncharacterized conserved protein (DUF2132) SUTH_02042 PF00176 SNF2 family N-terminal domain SUTH_02042 PF00271 Helicase conserved C-terminal domain SUTH_02042 PF04434 SUTH_02042 SUTH_02043 PF03824 SUTH_02043 SUTH_02044 PF00563 EAL domain SUTH_02044 PF00990 GGDEF domain SUTH_02044 PF08448 PAS fold SUTH_02044 PF17159 SUTH_02044 SUTH_02045 PF13468 Glyoxalase-like domain SUTH_02046 PF01402 Ribbon-helix-helix protein, copG family SUTH_02046 PF08753 NikR C terminal nickel binding domain SUTH_02048 PF01590 GAF domain SUTH_02048 PF13487 HD domain SUTH_02049 PF01257 Thioredoxin-like [2Fe-2S] ferredoxin SUTH_02049 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit SUTH_02049 PF10531 SLBB domain SUTH_02049 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region SUTH_02050 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region SUTH_02050 PF13459 4Fe-4S single cluster domain SUTH_02050 PF13510 2Fe-2S iron-sulfur cluster binding domain SUTH_02051 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit SUTH_02052 PF00374 Nickel-dependent hydrogenase SUTH_02054 PF00723 Glycosyl hydrolases family 15 SUTH_02055 PF02358 Trehalose-phosphatase SUTH_02056 PF00982 Glycosyltransferase family 20 SUTH_02057 PF00582 Universal stress protein family SUTH_02058 PF00512 His Kinase A (phospho-acceptor) domain SUTH_02058 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SUTH_02058 PF05231 SUTH_02058 SUTH_02059 PF00072 Response regulator receiver domain SUTH_02059 PF00196 Bacterial regulatory proteins, luxR family SUTH_02060 PF13649 Methyltransferase domain SUTH_02061 PF09719 Putative redox-active protein (C_GCAxxG_C_C) SUTH_02062 PF01925 SUTH_02062 SUTH_02064 PF08668 HDOD domain SUTH_02065 PF01926 50S ribosome-binding GTPase SUTH_02065 PF13167 SUTH_02065 SUTH_02065 PF16360 SUTH_02065 SUTH_02066 PF00561 alpha/beta hydrolase fold SUTH_02067 PF02798 Glutathione S-transferase, N-terminal domain SUTH_02067 PF14497 Glutathione S-transferase, C-terminal domain SUTH_02069 PF10047 SUTH_02069 SUTH_02070 PF13560 Helix-turn-helix domain SUTH_02072 PF05973 SUTH_02072 SUTH_02073 PF00378 Enoyl-CoA hydratase/isomerase family SUTH_02074 PF00501 AMP-binding enzyme SUTH_02075 PF00005 ABC transporter SUTH_02076 PF13458 Periplasmic binding protein SUTH_02077 PF02653 SUTH_02077 SUTH_02078 PF02653 SUTH_02078 SUTH_02079 PF00005 ABC transporter SUTH_02079 PF12399 Branched-chain amino acid ATP-binding cassette transporter SUTH_02080 PF00440 Bacterial regulatory proteins, tetR family SUTH_02081 PF00106 short chain dehydrogenase SUTH_02082 PF01370 NAD dependent epimerase/dehydratase family SUTH_02083 PF01758 Sodium Bile acid symporter family SUTH_02084 PF00205 Thiamine pyrophosphate enzyme, central domain SUTH_02084 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain SUTH_02084 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain SUTH_02085 PF00205 Thiamine pyrophosphate enzyme, central domain SUTH_02085 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain SUTH_02085 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain SUTH_02086 PF01614 Bacterial transcriptional regulator SUTH_02086 PF09339 IclR helix-turn-helix domain SUTH_02087 PF07995 Glucose / Sorbosone dehydrogenase SUTH_02088 PF01515 Phosphate acetyl/butaryl transferase SUTH_02088 PF01575 MaoC like domain SUTH_02089 PF00871 Acetokinase family SUTH_02090 PF02867 Ribonucleotide reductase, barrel domain SUTH_02091 PF00072 Response regulator receiver domain SUTH_02091 PF00512 His Kinase A (phospho-acceptor) domain SUTH_02091 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SUTH_02092 PF00072 Response regulator receiver domain SUTH_02092 PF13487 HD domain SUTH_02093 PF00989 PAS fold SUTH_02093 PF12729 SUTH_02093 SUTH_02093 PF13185 GAF domain SUTH_02094 PF01339 CheB methylesterase SUTH_02094 PF01739 CheR methyltransferase, SAM binding domain SUTH_02094 PF03705 CheR methyltransferase, all-alpha domain SUTH_02095 PF00072 Response regulator receiver domain SUTH_02095 PF00512 His Kinase A (phospho-acceptor) domain SUTH_02095 PF00672 HAMP domain SUTH_02095 PF00989 PAS fold SUTH_02095 PF01627 Hpt domain SUTH_02095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SUTH_02095 PF08447 PAS fold SUTH_02095 PF12729 SUTH_02095 SUTH_02095 PF13185 GAF domain SUTH_02096 PF01814 Hemerythrin HHE cation binding domain SUTH_02096 PF08448 PAS fold SUTH_02096 PF10114 SUTH_02096 SUTH_02097 PF00072 Response regulator receiver domain SUTH_02097 PF00512 His Kinase A (phospho-acceptor) domain SUTH_02097 PF00672 HAMP domain SUTH_02097 PF00989 PAS fold SUTH_02097 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SUTH_02097 PF13185 GAF domain SUTH_02097 PF13426 PAS domain SUTH_02098 PF12697 Alpha/beta hydrolase family SUTH_02099 PF01541 GIY-YIG catalytic domain SUTH_02101 PF13456 Reverse transcriptase-like SUTH_02102 PF08668 HDOD domain SUTH_02103 PF00005 ABC transporter SUTH_02103 PF12848 ABC transporter SUTH_02103 PF16326 SUTH_02103 SUTH_02105 PF12796 Ankyrin repeats (3 copies) SUTH_02106 PF04214 SUTH_02106 SUTH_02107 PF07992 Pyridine nucleotide-disulphide oxidoreductase SUTH_02109 PF00211 Adenylate and Guanylate cyclase catalytic domain SUTH_02109 PF01590 GAF domain SUTH_02109 PF08448 PAS fold SUTH_02110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SUTH_02110 PF08448 PAS fold SUTH_02110 PF12860 SUTH_02110 SUTH_02111 PF00072 Response regulator receiver domain SUTH_02111 PF11849 SUTH_02111 SUTH_02111 PF13487 HD domain SUTH_02112 PF04386 Stringent starvation protein B SUTH_02113 PF00043 Glutathione S-transferase, C-terminal domain SUTH_02113 PF13417 Glutathione S-transferase, N-terminal domain SUTH_02114 PF02167 Cytochrome C1 family SUTH_02115 PF00032 Cytochrome b(C-terminal)/b6/petD SUTH_02115 PF00033 Cytochrome b(N-terminal)/b6/petB SUTH_02116 PF00355 Rieske [2Fe-2S] domain SUTH_02116 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal SUTH_02117 PF02515 CoA-transferase family III SUTH_02118 PF02132 RecR protein SUTH_02118 PF13662 Toprim domain SUTH_02119 PF02575 YbaB/EbfC DNA-binding family SUTH_02120 PF12169 DNA polymerase III subunits gamma and tau domain III SUTH_02120 PF12170 DNA polymerase III tau subunit V interacting with alpha SUTH_02120 PF13177 DNA polymerase III, delta subunit SUTH_02121 PF07813 LTXXQ motif family protein SUTH_02123 PF14451 SUTH_02123 SUTH_02124 PF07992 Pyridine nucleotide-disulphide oxidoreductase SUTH_02125 PF07992 Pyridine nucleotide-disulphide oxidoreductase SUTH_02126 PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 SUTH_02126 PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain SUTH_02127 PF12837 4Fe-4S binding domain SUTH_02127 PF13247 4Fe-4S dicluster domain SUTH_02128 PF12697 Alpha/beta hydrolase family SUTH_02129 PF01636 Phosphotransferase enzyme family SUTH_02130 PF00753 Metallo-beta-lactamase superfamily SUTH_02130 PF03772 SUTH_02130 SUTH_02130 PF13567 SUTH_02130 SUTH_02131 PF00571 CBS domain SUTH_02133 PF01557 Fumarylacetoacetate (FAA) hydrolase family SUTH_02134 PF09835 SUTH_02134 SUTH_02135 PF00005 ABC transporter SUTH_02136 PF02687 SUTH_02136 SUTH_02136 PF12704 MacB-like periplasmic core domain SUTH_02137 PF01850 PIN domain SUTH_02138 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system SUTH_02139 PF00589 Phage integrase family SUTH_02140 PF01850 PIN domain SUTH_02141 PF15937 SUTH_02141 SUTH_02143 PF01368 DHH family SUTH_02143 PF02272 DHHA1 domain SUTH_02144 PF00563 EAL domain SUTH_02144 PF00990 GGDEF domain SUTH_02144 PF03924 CHASE domain SUTH_02144 PF08448 PAS fold SUTH_02144 PF13426 PAS domain SUTH_02145 PF13302 Acetyltransferase (GNAT) domain SUTH_02146 PF02540 NAD synthase SUTH_02147 PF02146 Sir2 family SUTH_02147 PF03253 Urea transporter SUTH_02148 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain SUTH_02148 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain SUTH_02150 PF05402 Coenzyme PQQ synthesis protein D (PqqD) SUTH_02151 PF13174 Tetratricopeptide repeat SUTH_02151 PF13432 Tetratricopeptide repeat SUTH_02152 PF00563 EAL domain SUTH_02152 PF00990 GGDEF domain SUTH_02152 PF03924 CHASE domain SUTH_02152 PF08448 PAS fold SUTH_02153 PF01965 DJ-1/PfpI family SUTH_02154 PF00009 Elongation factor Tu GTP binding domain SUTH_02154 PF16658 SUTH_02154 SUTH_02155 PF03459 TOBE domain SUTH_02156 PF01037 AsnC family SUTH_02156 PF13412 Winged helix-turn-helix DNA-binding SUTH_02157 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase SUTH_02158 PF02558 Ketopantoate reductase PanE/ApbA SUTH_02158 PF08546 Ketopantoate reductase PanE/ApbA C terminal SUTH_02159 PF04055 Radical SAM superfamily SUTH_02159 PF06463 Molybdenum Cofactor Synthesis C SUTH_02159 PF13353 4Fe-4S single cluster domain SUTH_02160 PF00994 Probable molybdopterin binding domain SUTH_02160 PF03453 MoeA N-terminal region (domain I and II) SUTH_02160 PF03454 MoeA C-terminal region (domain IV) SUTH_02161 PF01435 Peptidase family M48 SUTH_02162 PF01263 Aldose 1-epimerase SUTH_02164 PF00296 Luciferase-like monooxygenase SUTH_02165 PF00027 Cyclic nucleotide-binding domain SUTH_02166 PF02687 SUTH_02166 SUTH_02166 PF12704 MacB-like periplasmic core domain SUTH_02167 PF02687 SUTH_02167 SUTH_02167 PF12704 MacB-like periplasmic core domain SUTH_02168 PF00005 ABC transporter SUTH_02169 PF00529 HlyD family secretion protein SUTH_02169 PF16576 SUTH_02169 SUTH_02170 PF16106 SUTH_02170 SUTH_02171 PF09925 SUTH_02171 SUTH_02172 PF03960 ArsC family SUTH_02173 PF01430 Hsp33 protein SUTH_02174 PF01564 Spermine/spermidine synthase SUTH_02175 PF00892 EamA-like transporter family SUTH_02176 PF13751 SUTH_02176 SUTH_02178 PF01381 Helix-turn-helix SUTH_02179 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system SUTH_02180 PF06769 Plasmid encoded toxin Txe SUTH_02181 PF00933 Glycosyl hydrolase family 3 N terminal domain SUTH_02182 PF01648 4'-phosphopantetheinyl transferase superfamily SUTH_02183 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ SUTH_02184 PF02565 Recombination protein O C terminal SUTH_02184 PF11967 Recombination protein O N terminal SUTH_02185 PF01926 50S ribosome-binding GTPase SUTH_02185 PF07650 KH domain SUTH_02186 PF00035 Double-stranded RNA binding motif SUTH_02186 PF14622 Ribonuclease-III-like SUTH_02187 PF16137 SUTH_02187 SUTH_02188 PF00717 Peptidase S24-like SUTH_02188 PF10502 Signal peptidase, peptidase S26 SUTH_02189 PF00009 Elongation factor Tu GTP binding domain SUTH_02189 PF00679 Elongation factor G C-terminus SUTH_02189 PF03144 Elongation factor Tu domain 2 SUTH_02189 PF06421 GTP-binding protein LepA C-terminus SUTH_02190 PF05768 Glutaredoxin-like domain (DUF836) SUTH_02191 PF13180 PDZ domain SUTH_02191 PF13365 Trypsin-like peptidase domain SUTH_02192 PF04246 SUTH_02192 SUTH_02193 PF03888 MucB/RseB family SUTH_02193 PF17188 SUTH_02193 SUTH_02194 PF03872 Anti sigma-E protein RseA, N-terminal domain SUTH_02195 PF04542 Sigma-70 region 2 SUTH_02195 PF08281 Sigma-70, region 4 SUTH_02196 PF00890 FAD binding domain SUTH_02196 PF02910 Fumarate reductase flavoprotein C-term SUTH_02198 PF00109 Beta-ketoacyl synthase, N-terminal domain SUTH_02198 PF02801 Beta-ketoacyl synthase, C-terminal domain SUTH_02199 PF00550 Phosphopantetheine attachment site SUTH_02200 PF13561 Enoyl-(Acyl carrier protein) reductase SUTH_02201 PF00698 Acyl transferase domain SUTH_02202 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal SUTH_02202 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III SUTH_02203 PF02504 Fatty acid synthesis protein SUTH_02204 PF01783 Ribosomal L32p protein family SUTH_02205 PF02620 SUTH_02205 SUTH_02206 PF02545 Maf-like protein SUTH_02207 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases SUTH_02208 PF10017 SUTH_02208 SUTH_02209 PF00586 AIR synthase related protein, N-terminal domain SUTH_02209 PF02769 AIR synthase related protein, C-terminal domain SUTH_02210 PF00534 Glycosyl transferases group 1 SUTH_02211 PF03781 Sulfatase-modifying factor enzyme 1 SUTH_02211 PF12867 DinB superfamily SUTH_02212 PF05437 SUTH_02212 SUTH_02213 PF03591 SUTH_02213 SUTH_02214 PF00892 EamA-like transporter family SUTH_02215 PF03692 SUTH_02215 SUTH_02216 PF01384 SUTH_02216 SUTH_02217 PF01865 Protein of unknown function DUF47 SUTH_02218 PF11062 SUTH_02218 SUTH_02219 PF01266 FAD dependent oxidoreductase SUTH_02220 PF01641 SelR domain SUTH_02221 PF04279 SUTH_02221 SUTH_02222 PF03795 YCII-related domain SUTH_02223 PF01722 BolA-like protein SUTH_02224 PF13616 PPIC-type PPIASE domain SUTH_02225 PF02769 AIR synthase related protein, C-terminal domain SUTH_02225 PF13507 CobB/CobQ-like glutamine amidotransferase domain SUTH_02226 PF00990 GGDEF domain SUTH_02227 PF00085 Thioredoxin SUTH_02227 PF14559 Tetratricopeptide repeat SUTH_02227 PF14561 Tetratricopeptide repeat SUTH_02228 PF00990 GGDEF domain SUTH_02228 PF11845 SUTH_02228 SUTH_02228 PF13426 PAS domain SUTH_02229 PF00180 Isocitrate/isopropylmalate dehydrogenase SUTH_02230 PF02687 SUTH_02230 SUTH_02231 PF13541 Subunit ChlI of Mg-chelatase SUTH_02232 PF04832 SOUL heme-binding protein SUTH_02233 PF00881 Nitroreductase family SUTH_02234 PF03466 LysR substrate binding domain SUTH_02235 PF01527 Transposase SUTH_02236 PF05717 SUTH_02236 SUTH_02237 PF03050 SUTH_02237 SUTH_02237 PF13005 SUTH_02237 SUTH_02237 PF13007 SUTH_02237 SUTH_02237 PF13817 SUTH_02237 SUTH_02238 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SUTH_02238 PF03466 LysR substrate binding domain SUTH_02239 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain SUTH_02239 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain SUTH_02240 PF00528 Binding-protein-dependent transport system inner membrane component SUTH_02241 PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein SUTH_02242 PF00005 ABC transporter SUTH_02243 PF13481 AAA domain SUTH_02243 PF13541 Subunit ChlI of Mg-chelatase SUTH_02244 PF13538 UvrD-like helicase C-terminal domain SUTH_02244 PF13604 AAA domain SUTH_02244 PF14490 Helix-hairpin-helix containing domain SUTH_02247 PF13009 SUTH_02247 SUTH_02249 PF06745 KaiC SUTH_02250 PF00842 Alanine racemase, C-terminal domain SUTH_02250 PF01168 Alanine racemase, N-terminal domain SUTH_02251 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SUTH_02251 PF03466 LysR substrate binding domain SUTH_02252 PF07690 Major Facilitator Superfamily SUTH_02253 PF01545 Cation efflux family SUTH_02254 PF03167 Uracil DNA glycosylase superfamily SUTH_02255 PF00583 Acetyltransferase (GNAT) family SUTH_02256 PF00814 Glycoprotease family SUTH_02257 PF01145 SPFH domain / Band 7 family SUTH_02258 PF01957 NfeD-like C-terminal, partner-binding SUTH_02259 PF00216 Bacterial DNA-binding protein SUTH_02260 PF00588 SpoU rRNA Methylase family SUTH_02261 PF01351 Ribonuclease HII SUTH_02262 PF02684 SUTH_02262 SUTH_02263 PF00132 Bacterial transferase hexapeptide (six repeats) SUTH_02263 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 SUTH_02264 PF07977 FabA-like domain SUTH_02265 PF00132 Bacterial transferase hexapeptide (six repeats) SUTH_02265 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD SUTH_02266 PF03938 Outer membrane protein (OmpH-like) SUTH_02267 PF01103 Surface antigen SUTH_02267 PF07244 Surface antigen variable number repeat SUTH_02268 PF02163 Peptidase family M50 SUTH_02268 PF13180 PDZ domain SUTH_02269 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase SUTH_02269 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal SUTH_02269 PF13288 DXP reductoisomerase C-terminal domain SUTH_02270 PF01148 Cytidylyltransferase family SUTH_02271 PF01255 Putative undecaprenyl diphosphate synthase SUTH_02272 PF01765 Ribosome recycling factor SUTH_02273 PF00696 Amino acid kinase family SUTH_02274 PF00889 Elongation factor TS SUTH_02275 PF00318 Ribosomal protein S2 SUTH_02277 PF00557 Metallopeptidase family M24 SUTH_02278 PF01909 Nucleotidyltransferase domain SUTH_02278 PF01966 HD domain SUTH_02278 PF08335 GlnD PII-uridylyltransferase SUTH_02279 PF00027 Cyclic nucleotide-binding domain SUTH_02280 PF01814 Hemerythrin HHE cation binding domain SUTH_02282 PF07087 SUTH_02282 SUTH_02283 PF07087 SUTH_02283 SUTH_02285 PF13416 Bacterial extracellular solute-binding protein SUTH_02286 PF00528 Binding-protein-dependent transport system inner membrane component SUTH_02287 PF00528 Binding-protein-dependent transport system inner membrane component SUTH_02288 PF00005 ABC transporter SUTH_02288 PF08402 TOBE domain SUTH_02290 PF00580 UvrD/REP helicase N-terminal domain SUTH_02290 PF12705 PD-(D/E)XK nuclease superfamily SUTH_02290 PF13361 UvrD-like helicase C-terminal domain SUTH_02291 PF12705 PD-(D/E)XK nuclease superfamily SUTH_02292 PF10543 SUTH_02292 SUTH_02293 PF02646 SUTH_02293 SUTH_02294 PF01479 S4 domain SUTH_02295 PF00881 Nitroreductase family SUTH_02296 PF01575 MaoC like domain SUTH_02299 PF02421 Ferrous iron transport protein B SUTH_02299 PF07670 Nucleoside recognition SUTH_02300 PF00571 CBS domain SUTH_02300 PF03445 SUTH_02300 SUTH_02300 PF10335 SUTH_02300 SUTH_02301 PF03445 SUTH_02301 SUTH_02301 PF10335 SUTH_02301 SUTH_02302 PF00929 Exonuclease SUTH_02303 PF01152 Bacterial-like globin SUTH_02304 PF00072 Response regulator receiver domain SUTH_02305 PF00512 His Kinase A (phospho-acceptor) domain SUTH_02305 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SUTH_02307 PF00501 AMP-binding enzyme SUTH_02307 PF13193 AMP-binding enzyme C-terminal domain SUTH_02307 PF16177 SUTH_02307 SUTH_02308 PF03350 SUTH_02308 SUTH_02309 PF05681 SUTH_02309 SUTH_02309 PF05683 Fumarase C-terminus SUTH_02310 PF09970 SUTH_02310 SUTH_02311 PF01177 Asp/Glu/Hydantoin racemase SUTH_02313 PF02824 TGS domain SUTH_02313 PF04607 Region found in RelA / SpoT proteins SUTH_02313 PF13291 ACT domain SUTH_02313 PF13328 HD domain SUTH_02314 PF00892 EamA-like transporter family SUTH_02315 PF06167 Glucose-regulated metallo-peptidase M90 SUTH_02316 PF00563 EAL domain SUTH_02316 PF00990 GGDEF domain SUTH_02316 PF08448 PAS fold SUTH_02316 PF13426 PAS domain SUTH_02319 PF00441 Acyl-CoA dehydrogenase, C-terminal domain SUTH_02319 PF02770 Acyl-CoA dehydrogenase, middle domain SUTH_02319 PF02771 Acyl-CoA dehydrogenase, N-terminal domain SUTH_02320 PF00441 Acyl-CoA dehydrogenase, C-terminal domain SUTH_02320 PF02770 Acyl-CoA dehydrogenase, middle domain SUTH_02320 PF02771 Acyl-CoA dehydrogenase, N-terminal domain SUTH_02321 PF00441 Acyl-CoA dehydrogenase, C-terminal domain SUTH_02321 PF02770 Acyl-CoA dehydrogenase, middle domain SUTH_02321 PF02771 Acyl-CoA dehydrogenase, N-terminal domain SUTH_02321 PF12418 SUTH_02321 SUTH_02321 PF12806 SUTH_02321 SUTH_02322 PF00378 Enoyl-CoA hydratase/isomerase family SUTH_02323 PF03061 Thioesterase superfamily SUTH_02324 PF03061 Thioesterase superfamily SUTH_02325 PF04029 2-phosphosulpholactate phosphatase SUTH_02326 PF01575 MaoC like domain SUTH_02327 PF00501 AMP-binding enzyme SUTH_02327 PF13193 AMP-binding enzyme C-terminal domain SUTH_02328 PF00378 Enoyl-CoA hydratase/isomerase family SUTH_02329 PF12697 Alpha/beta hydrolase family SUTH_02330 PF02566 OsmC-like protein SUTH_02331 PF10861 SUTH_02331 SUTH_02332 PF02493 MORN repeat SUTH_02333 PF01614 Bacterial transcriptional regulator SUTH_02333 PF09339 IclR helix-turn-helix domain SUTH_02334 PF03060 Nitronate monooxygenase SUTH_02335 PF07690 Major Facilitator Superfamily SUTH_02336 PF00501 AMP-binding enzyme SUTH_02336 PF13193 AMP-binding enzyme C-terminal domain SUTH_02338 PF00441 Acyl-CoA dehydrogenase, C-terminal domain SUTH_02338 PF02770 Acyl-CoA dehydrogenase, middle domain SUTH_02338 PF02771 Acyl-CoA dehydrogenase, N-terminal domain SUTH_02339 PF00441 Acyl-CoA dehydrogenase, C-terminal domain SUTH_02339 PF02771 Acyl-CoA dehydrogenase, N-terminal domain SUTH_02340 PF13622 Thioesterase-like superfamily SUTH_02341 PF00107 Zinc-binding dehydrogenase SUTH_02341 PF08240 Alcohol dehydrogenase GroES-like domain SUTH_02342 PF12697 Alpha/beta hydrolase family SUTH_02343 PF09365 SUTH_02343 SUTH_02344 PF00849 RNA pseudouridylate synthase SUTH_02345 PF00498 FHA domain SUTH_02346 PF00027 Cyclic nucleotide-binding domain SUTH_02346 PF13545 Crp-like helix-turn-helix domain SUTH_02346 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term SUTH_02347 PF00072 Response regulator receiver domain SUTH_02347 PF00512 His Kinase A (phospho-acceptor) domain SUTH_02347 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SUTH_02347 PF08447 PAS fold SUTH_02347 PF08448 PAS fold SUTH_02347 PF13426 PAS domain SUTH_02348 PF10672 S-adenosylmethionine-dependent methyltransferase SUTH_02349 PF00085 Thioredoxin SUTH_02350 PF00270 DEAD/DEAH box helicase SUTH_02350 PF00271 Helicase conserved C-terminal domain SUTH_02350 PF03880 DbpA RNA binding domain SUTH_02351 PF00132 Bacterial transferase hexapeptide (six repeats) SUTH_02352 PF04977 Septum formation initiator SUTH_02353 PF00113 Enolase, C-terminal TIM barrel domain SUTH_02353 PF03952 Enolase, N-terminal domain SUTH_02354 PF07045 Protein of unknown function (DUF1330) SUTH_02355 PF00793 DAHP synthetase I family SUTH_02356 PF00117 Glutamine amidotransferase class-I SUTH_02356 PF06418 CTP synthase N-terminus SUTH_02357 PF07277 SUTH_02357 SUTH_02358 PF00472 RF-1 domain SUTH_02358 PF03462 PCRF domain SUTH_02361 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system SUTH_02362 PF01850 PIN domain SUTH_02363 PF00152 tRNA synthetases class II (D, K and N) SUTH_02363 PF01336 OB-fold nucleic acid binding domain SUTH_02364 PF01266 FAD dependent oxidoreductase SUTH_02364 PF05430 S-adenosyl-L-methionine-dependent methyltransferase SUTH_02365 PF05433 SUTH_02365 SUTH_02366 PF01435 Peptidase family M48 SUTH_02367 PF00749 tRNA synthetases class I (E and Q), catalytic domain SUTH_02369 PF13753 Putative flagellar system-associated repeat SUTH_02370 PF13437 HlyD family secretion protein SUTH_02370 PF13533 Biotin-lipoyl like SUTH_02371 PF00005 ABC transporter SUTH_02371 PF00664 ABC transporter transmembrane region SUTH_02372 PF02321 Outer membrane efflux protein SUTH_02373 PF00211 Adenylate and Guanylate cyclase catalytic domain SUTH_02373 PF03704 Bacterial transcriptional activator domain SUTH_02373 PF13191 AAA ATPase domain SUTH_02374 PF03358 NADPH-dependent FMN reductase SUTH_02375 PF00696 Amino acid kinase family SUTH_02375 PF01842 ACT domain SUTH_02375 PF13840 ACT domain SUTH_02376 PF13560 Helix-turn-helix domain SUTH_02378 PF01242 6-pyruvoyl tetrahydropterin synthase SUTH_02379 PF00501 AMP-binding enzyme SUTH_02379 PF13193 AMP-binding enzyme C-terminal domain SUTH_02380 PF13410 Glutathione S-transferase, C-terminal domain SUTH_02380 PF13417 Glutathione S-transferase, N-terminal domain SUTH_02381 PF00378 Enoyl-CoA hydratase/isomerase family SUTH_02383 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system SUTH_02384 PF01850 PIN domain SUTH_02385 PF04471 Restriction endonuclease SUTH_02385 PF14338 SUTH_02385 SUTH_02386 PF00656 Caspase domain SUTH_02387 PF00106 short chain dehydrogenase SUTH_02388 PF01565 FAD binding domain SUTH_02389 PF13424 Tetratricopeptide repeat SUTH_02390 PF08238 Sel1 repeat SUTH_02391 PF08238 Sel1 repeat SUTH_02393 PF13400 SUTH_02393 SUTH_02397 PF16976 SUTH_02397 SUTH_02398 PF00263 SUTH_02398 SUTH_02398 PF13629 SUTH_02398 SUTH_02399 PF00437 Type II/IV secretion system protein SUTH_02399 PF00498 FHA domain SUTH_02400 PF00482 Type II secretion system (T2SS), protein F SUTH_02401 PF00482 Type II secretion system (T2SS), protein F SUTH_02402 PF02643 Uncharacterized ACR, COG1430 SUTH_02403 PF13428 Tetratricopeptide repeat SUTH_02404 PF07811 SUTH_02404 SUTH_02405 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB SUTH_02405 PF08479 POTRA domain, ShlB-type SUTH_02406 PF05860 haemagglutination activity domain SUTH_02407 PF05656 SUTH_02407 SUTH_02408 PF00027 Cyclic nucleotide-binding domain SUTH_02409 PF00027 Cyclic nucleotide-binding domain SUTH_02410 PF01464 Transglycosylase SLT domain SUTH_02412 PF01027 Inhibitor of apoptosis-promoting Bax1 SUTH_02413 PF01938 TRAM domain SUTH_02413 PF05958 tRNA (Uracil-5-)-methyltransferase SUTH_02416 PF12706 Beta-lactamase superfamily domain SUTH_02417 PF06804 NlpB/DapX lipoprotein SUTH_02418 PF00701 Dihydrodipicolinate synthetase family SUTH_02419 PF00850 Histone deacetylase domain SUTH_02420 PF07726 ATPase family associated with various cellular activities (AAA) SUTH_02421 PF01882 SUTH_02421 SUTH_02422 PF01841 Transglutaminase-like superfamily SUTH_02422 PF11992 SUTH_02422 SUTH_02422 PF13559 SUTH_02422 SUTH_02423 PF13406 Transglycosylase SLT domain SUTH_02424 PF00140 Sigma-70 factor, region 1 SUTH_02424 PF04539 Sigma-70 region 3 SUTH_02424 PF04542 Sigma-70 region 2 SUTH_02424 PF04545 Sigma-70, region 4 SUTH_02425 PF01476 LysM domain SUTH_02425 PF01551 Peptidase family M23 SUTH_02426 PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) SUTH_02427 PF01975 Survival protein SurE SUTH_02428 PF04339 SUTH_02428 SUTH_02432 PF13411 MerR HTH family regulatory protein SUTH_02433 PF00216 Bacterial DNA-binding protein SUTH_02434 PF01588 Putative tRNA binding domain SUTH_02434 PF03147 Ferredoxin-fold anticodon binding domain SUTH_02434 PF03483 B3/4 domain SUTH_02434 PF03484 tRNA synthetase B5 domain SUTH_02435 PF01409 tRNA synthetases class II core domain (F) SUTH_02435 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain SUTH_02436 PF00453 Ribosomal protein L20 SUTH_02437 PF01632 Ribosomal protein L35 SUTH_02438 PF00707 Translation initiation factor IF-3, C-terminal domain SUTH_02438 PF05198 Translation initiation factor IF-3, N-terminal domain SUTH_02439 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) SUTH_02439 PF02824 TGS domain SUTH_02439 PF03129 Anticodon binding domain SUTH_02439 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain SUTH_02440 PF12680 SnoaL-like domain SUTH_02442 PF00501 AMP-binding enzyme SUTH_02442 PF13193 AMP-binding enzyme C-terminal domain SUTH_02442 PF16177 SUTH_02442 SUTH_02443 PF00107 Zinc-binding dehydrogenase SUTH_02444 PF00877 NlpC/P60 family SUTH_02445 PF13343 Bacterial extracellular solute-binding protein SUTH_02446 PF09360 Iron-binding zinc finger CDGSH type SUTH_02447 PF00528 Binding-protein-dependent transport system inner membrane component SUTH_02448 PF00005 ABC transporter SUTH_02448 PF08402 TOBE domain SUTH_02449 PF03588 Leucyl/phenylalanyl-tRNA protein transferase SUTH_02450 PF04376 SUTH_02450 SUTH_02450 PF04377 SUTH_02450 SUTH_02451 PF13561 Enoyl-(Acyl carrier protein) reductase SUTH_02452 PF13616 PPIC-type PPIASE domain SUTH_02452 PF13624 SurA N-terminal domain SUTH_02454 PF00004 ATPase family associated with various cellular activities (AAA) SUTH_02454 PF02190 ATP-dependent protease La (LON) domain SUTH_02454 PF05362 Lon protease (S16) C-terminal proteolytic domain SUTH_02455 PF06689 ClpX C4-type zinc finger SUTH_02455 PF07724 AAA domain (Cdc48 subfamily) SUTH_02455 PF10431 C-terminal, D2-small domain, of ClpB protein SUTH_02456 PF00574 Clp protease SUTH_02457 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase SUTH_02457 PF05697 Bacterial trigger factor protein (TF) SUTH_02457 PF05698 Bacterial trigger factor protein (TF) C-terminus SUTH_02459 PF00494 Squalene/phytoene synthase SUTH_02460 PF00494 Squalene/phytoene synthase SUTH_02461 PF01593 Flavin containing amine oxidoreductase SUTH_02462 PF00005 ABC transporter SUTH_02463 PF13472 GDSL-like Lipase/Acylhydrolase family SUTH_02464 PF00581 Rhodanese-like domain SUTH_02465 PF00072 Response regulator receiver domain SUTH_02465 PF04397 LytTr DNA-binding domain SUTH_02466 PF06580 SUTH_02466 SUTH_02467 PF13239 SUTH_02467 SUTH_02468 PF13649 Methyltransferase domain SUTH_02469 PF00211 Adenylate and Guanylate cyclase catalytic domain SUTH_02470 PF13302 Acetyltransferase (GNAT) domain SUTH_02470 PF13380 CoA binding domain SUTH_02470 PF13549 ATP-grasp domain SUTH_02470 PF13607 Succinyl-CoA ligase like flavodoxin domain SUTH_02471 PF03352 Methyladenine glycosylase SUTH_02472 PF00211 Adenylate and Guanylate cyclase catalytic domain SUTH_02472 PF00989 PAS fold SUTH_02472 PF01590 GAF domain SUTH_02473 PF00501 AMP-binding enzyme SUTH_02473 PF13193 AMP-binding enzyme C-terminal domain SUTH_02474 PF07690 Major Facilitator Superfamily SUTH_02476 PF02661 Fic/DOC family SUTH_02477 PF04014 Antidote-toxin recognition MazE SUTH_02478 PF00004 ATPase family associated with various cellular activities (AAA) SUTH_02478 PF02861 Clp amino terminal domain SUTH_02478 PF07724 AAA domain (Cdc48 subfamily) SUTH_02478 PF10431 C-terminal, D2-small domain, of ClpB protein SUTH_02479 PF00072 Response regulator receiver domain SUTH_02479 PF00512 His Kinase A (phospho-acceptor) domain SUTH_02479 PF00989 PAS fold SUTH_02479 PF01627 Hpt domain SUTH_02479 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SUTH_02479 PF02743 Cache domain SUTH_02479 PF08447 PAS fold SUTH_02479 PF13188 PAS domain SUTH_02480 PF00072 Response regulator receiver domain SUTH_02480 PF00990 GGDEF domain SUTH_02481 PF06993 SUTH_02481 SUTH_02482 PF09361 SUTH_02482 SUTH_02483 PF13682 Chemoreceptor zinc-binding domain SUTH_02484 PF02391 MoaE protein SUTH_02485 PF02597 ThiS family SUTH_02486 PF00994 Probable molybdopterin binding domain SUTH_02486 PF03453 MoeA N-terminal region (domain I and II) SUTH_02486 PF03454 MoeA C-terminal region (domain IV) SUTH_02487 PF03205 Molybdopterin guanine dinucleotide synthesis protein B SUTH_02489 PF13307 Helicase C-terminal domain SUTH_02490 PF05016 Plasmid stabilisation system protein SUTH_02492 PF13247 4Fe-4S dicluster domain SUTH_02493 PF03916 SUTH_02493 SUTH_02496 PF01814 Hemerythrin HHE cation binding domain SUTH_02497 PF08668 HDOD domain SUTH_02500 PF01053 Cys/Met metabolism PLP-dependent enzyme SUTH_02501 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain SUTH_02501 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I SUTH_02501 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II SUTH_02501 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III SUTH_02502 PF01339 CheB methylesterase SUTH_02502 PF01739 CheR methyltransferase, SAM binding domain SUTH_02502 PF03705 CheR methyltransferase, all-alpha domain SUTH_02502 PF08448 PAS fold SUTH_02502 PF13596 PAS domain SUTH_02503 PF07568 SUTH_02503 SUTH_02503 PF08447 PAS fold SUTH_02503 PF13426 PAS domain SUTH_02504 PF07568 SUTH_02504 SUTH_02504 PF13188 PAS domain SUTH_02505 PF00072 Response regulator receiver domain SUTH_02505 PF03861 ANTAR domain SUTH_02506 PF00563 EAL domain SUTH_02506 PF00990 GGDEF domain SUTH_02506 PF02743 Cache domain SUTH_02506 PF08447 PAS fold SUTH_02506 PF13426 PAS domain SUTH_02507 PF00072 Response regulator receiver domain SUTH_02507 PF00512 His Kinase A (phospho-acceptor) domain SUTH_02507 PF00989 PAS fold SUTH_02507 PF01627 Hpt domain SUTH_02507 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SUTH_02507 PF08448 PAS fold SUTH_02507 PF13426 PAS domain SUTH_02508 PF00072 Response regulator receiver domain SUTH_02508 PF13487 HD domain SUTH_02509 PF00072 Response regulator receiver domain SUTH_02511 PF13183 4Fe-4S dicluster domain SUTH_02512 PF01565 FAD binding domain SUTH_02513 PF05016 Plasmid stabilisation system protein SUTH_02514 PF03693 Uncharacterised protein family (UPF0156) SUTH_02517 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SUTH_02517 PF03466 LysR substrate binding domain SUTH_02518 PF00171 Aldehyde dehydrogenase family SUTH_02519 PF00732 GMC oxidoreductase SUTH_02519 PF05199 GMC oxidoreductase SUTH_02520 PF00753 Metallo-beta-lactamase superfamily SUTH_02523 PF00115 Cytochrome C and Quinol oxidase polypeptide I SUTH_02524 PF01040 UbiA prenyltransferase family SUTH_02525 PF02630 SCO1/SenC SUTH_02526 PF00033 Cytochrome b(N-terminal)/b6/petB SUTH_02526 PF02662 SUTH_02526 SUTH_02526 PF12838 4Fe-4S dicluster domain SUTH_02528 PF00033 Cytochrome b(N-terminal)/b6/petB SUTH_02528 PF00111 2Fe-2S iron-sulfur cluster binding domain SUTH_02528 PF00175 Oxidoreductase NAD-binding domain SUTH_02528 PF00970 Oxidoreductase FAD-binding domain SUTH_02529 PF13561 Enoyl-(Acyl carrier protein) reductase SUTH_02530 PF02230 Phospholipase/Carboxylesterase SUTH_02531 PF01966 HD domain SUTH_02531 PF11871 SUTH_02531 SUTH_02532 PF00115 Cytochrome C and Quinol oxidase polypeptide I SUTH_02533 PF02630 SCO1/SenC SUTH_02534 PF07027 SUTH_02534 SUTH_02535 PF00224 Pyruvate kinase, barrel domain SUTH_02536 PF00656 Caspase domain SUTH_02537 PF02239 Cytochrome D1 heme domain SUTH_02537 PF13442 Cytochrome C oxidase, cbb3-type, subunit III SUTH_02538 PF00027 Cyclic nucleotide-binding domain SUTH_02538 PF13545 Crp-like helix-turn-helix domain SUTH_02539 PF05573 NosL SUTH_02540 PF05573 NosL SUTH_02541 PF00593 TonB dependent receptor SUTH_02541 PF07715 TonB-dependent Receptor Plug Domain SUTH_02542 PF03929 SUTH_02542 SUTH_02543 PF03544 Gram-negative bacterial TonB protein C-terminal SUTH_02544 PF01618 SUTH_02544 SUTH_02545 PF02472 Biopolymer transport protein ExbD/TolR SUTH_02547 PF00593 TonB dependent receptor SUTH_02547 PF07715 TonB-dependent Receptor Plug Domain SUTH_02548 PF13386 SUTH_02548 SUTH_02549 PF00122 E1-E2 ATPase SUTH_02549 PF00403 Heavy-metal-associated domain SUTH_02549 PF00702 haloacid dehalogenase-like hydrolase SUTH_02553 PF00578 AhpC/TSA family SUTH_02555 PF00005 ABC transporter SUTH_02556 PF02687 SUTH_02556 SUTH_02558 PF02630 SCO1/SenC SUTH_02560 PF04055 Radical SAM superfamily SUTH_02560 PF13353 4Fe-4S single cluster domain SUTH_02561 PF05048 Periplasmic copper-binding protein (NosD) SUTH_02562 PF01040 UbiA prenyltransferase family SUTH_02563 PF00578 AhpC/TSA family SUTH_02564 PF12679 SUTH_02564 SUTH_02566 PF00005 ABC transporter SUTH_02567 PF00037 4Fe-4S binding domain SUTH_02567 PF12801 SUTH_02567 SUTH_02568 PF12800 4Fe-4S binding domain SUTH_02568 PF12838 4Fe-4S dicluster domain SUTH_02569 PF05048 Periplasmic copper-binding protein (NosD) SUTH_02571 PF00034 Cytochrome c SUTH_02571 PF13442 Cytochrome C oxidase, cbb3-type, subunit III SUTH_02572 PF00034 Cytochrome c SUTH_02573 PF13473 Cupredoxin-like domain SUTH_02575 PF00072 Response regulator receiver domain SUTH_02575 PF02954 Bacterial regulatory protein, Fis family SUTH_02576 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SUTH_02577 PF00034 Cytochrome c SUTH_02577 PF13442 Cytochrome C oxidase, cbb3-type, subunit III SUTH_02578 PF13404 AsnC-type helix-turn-helix domain SUTH_02579 PF13404 AsnC-type helix-turn-helix domain SUTH_02581 PF02239 Cytochrome D1 heme domain SUTH_02582 PF13442 Cytochrome C oxidase, cbb3-type, subunit III SUTH_02583 PF13473 Cupredoxin-like domain SUTH_02584 PF09459 Ethylbenzene dehydrogenase SUTH_02585 PF03264 NapC/NirT cytochrome c family, N-terminal region SUTH_02586 PF02239 Cytochrome D1 heme domain SUTH_02586 PF13442 Cytochrome C oxidase, cbb3-type, subunit III SUTH_02587 PF00593 TonB dependent receptor SUTH_02587 PF07715 TonB-dependent Receptor Plug Domain SUTH_02588 PF01032 FecCD transport family SUTH_02589 PF00005 ABC transporter SUTH_02590 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP SUTH_02590 PF12557 Cob(I)alamin adenosyltransferase N terminal SUTH_02591 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain SUTH_02591 PF07685 CobB/CobQ-like glutamine amidotransferase domain SUTH_02592 PF01497 Periplasmic binding protein SUTH_02593 PF01258 Prokaryotic dksA/traR C4-type zinc finger SUTH_02594 PF13560 Helix-turn-helix domain SUTH_02595 PF00155 Aminotransferase class I and II SUTH_02596 PF03186 SUTH_02596 SUTH_02597 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain SUTH_02597 PF07685 CobB/CobQ-like glutamine amidotransferase domain SUTH_02598 PF07819 PGAP1-like protein SUTH_02599 PF00501 AMP-binding enzyme SUTH_02599 PF13193 AMP-binding enzyme C-terminal domain SUTH_02600 PF09650 SUTH_02600 SUTH_02601 PF08668 HDOD domain SUTH_02602 PF00072 Response regulator receiver domain SUTH_02602 PF00512 His Kinase A (phospho-acceptor) domain SUTH_02602 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SUTH_02602 PF02743 Cache domain SUTH_02602 PF08448 PAS fold SUTH_02602 PF13426 PAS domain SUTH_02603 PF00887 Acyl CoA binding protein SUTH_02604 PF03007 SUTH_02604 SUTH_02604 PF06974 SUTH_02604 SUTH_02605 PF13432 Tetratricopeptide repeat SUTH_02606 PF00440 Bacterial regulatory proteins, tetR family SUTH_02606 PF13972 Bacterial transcriptional repressor SUTH_02607 PF05597 SUTH_02607 SUTH_02608 PF01488 Shikimate / quinate 5-dehydrogenase SUTH_02609 PF00465 Iron-containing alcohol dehydrogenase SUTH_02610 PF00732 GMC oxidoreductase SUTH_02610 PF05199 GMC oxidoreductase SUTH_02611 PF00561 alpha/beta hydrolase fold SUTH_02612 PF00171 Aldehyde dehydrogenase family SUTH_02614 PF05534 SUTH_02614 SUTH_02617 PF17278 SUTH_02617 SUTH_02618 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase SUTH_02619 PF12802 MarR family SUTH_02621 PF02277 Phosphoribosyltransferase SUTH_02622 PF02654 SUTH_02622 SUTH_02623 PF00300 Histidine phosphatase superfamily (branch 1) SUTH_02624 PF00990 GGDEF domain SUTH_02624 PF13188 PAS domain SUTH_02625 PF01661 Macro domain SUTH_02627 PF01609 Transposase DDE domain SUTH_02627 PF05598 SUTH_02627 SUTH_02631 PF13560 Helix-turn-helix domain SUTH_02633 PF05840 SUTH_02633 SUTH_02637 PF00239 Resolvase, N terminal domain SUTH_02640 PF01565 FAD binding domain SUTH_02640 PF02913 FAD linked oxidases, C-terminal domain SUTH_02641 PF00919 Uncharacterized protein family UPF0004 SUTH_02641 PF04055 Radical SAM superfamily SUTH_02642 PF05233 SUTH_02642 SUTH_02642 PF07879 SUTH_02642 SUTH_02643 PF13561 Enoyl-(Acyl carrier protein) reductase SUTH_02644 PF13561 Enoyl-(Acyl carrier protein) reductase SUTH_02645 PF07167 SUTH_02645 SUTH_02647 PF02535 SUTH_02647 SUTH_02648 PF02578 Multi-copper polyphenol oxidoreductase laccase SUTH_02649 PF00849 RNA pseudouridylate synthase SUTH_02650 PF13525 Outer membrane lipoprotein SUTH_02651 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain SUTH_02651 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain SUTH_02652 PF03061 Thioesterase superfamily SUTH_02653 PF13458 Periplasmic binding protein SUTH_02654 PF00072 Response regulator receiver domain SUTH_02654 PF00512 His Kinase A (phospho-acceptor) domain SUTH_02654 PF00672 HAMP domain SUTH_02654 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SUTH_02655 PF00072 Response regulator receiver domain SUTH_02655 PF00512 His Kinase A (phospho-acceptor) domain SUTH_02655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SUTH_02656 PF00588 SpoU rRNA Methylase family SUTH_02656 PF08032 RNA 2'-O ribose methyltransferase substrate binding SUTH_02657 PF00924 Mechanosensitive ion channel SUTH_02658 PF13091 PLD-like domain SUTH_02659 PF01189 NOL1/NOP2/sun family SUTH_02659 PF17125 SUTH_02659 SUTH_02660 PF11306 Protein of unknown function (DUF3108) SUTH_02661 PF00551 Formyl transferase SUTH_02663 PF09335 SUTH_02663 SUTH_02664 PF01119 DNA mismatch repair protein, C-terminal domain SUTH_02664 PF08676 MutL C terminal dimerisation domain SUTH_02664 PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SUTH_02665 PF12770 SUTH_02665 SUTH_02666 PF12770 SUTH_02666 SUTH_02667 PF01715 IPP transferase SUTH_02668 PF00586 AIR synthase related protein, N-terminal domain SUTH_02668 PF02769 AIR synthase related protein, C-terminal domain SUTH_02669 PF01594 SUTH_02669 SUTH_02670 PF00308 Bacterial dnaA protein SUTH_02671 PF12710 haloacid dehalogenase-like hydrolase SUTH_02673 PF04355 SmpA / OmlA family SUTH_02674 PF03061 Thioesterase superfamily SUTH_02675 PF12146 Putative lysophospholipase SUTH_02676 PF03928 Domain of unknown function (DUF336) SUTH_02677 PF03640 SUTH_02677 SUTH_02678 PF04542 Sigma-70 region 2 SUTH_02678 PF08281 Sigma-70, region 4 SUTH_02681 PF00890 FAD binding domain SUTH_02682 PF00205 Thiamine pyrophosphate enzyme, central domain SUTH_02682 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain SUTH_02682 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain SUTH_02684 PF00990 GGDEF domain SUTH_02684 PF08447 PAS fold SUTH_02684 PF08448 PAS fold SUTH_02684 PF12860 SUTH_02684 SUTH_02684 PF13426 PAS domain SUTH_02685 PF00892 EamA-like transporter family SUTH_02686 PF00355 Rieske [2Fe-2S] domain SUTH_02686 PF00848 Ring hydroxylating alpha subunit (catalytic domain) SUTH_02687 PF02609 Exonuclease VII small subunit SUTH_02688 PF00348 Polyprenyl synthetase SUTH_02689 PF02779 Transketolase, pyrimidine binding domain SUTH_02689 PF02780 Transketolase, C-terminal domain SUTH_02689 PF13292 1-deoxy-D-xylulose-5-phosphate synthase SUTH_02690 PF02649 Type I GTP cyclohydrolase folE2 SUTH_02691 PF01245 Ribosomal protein L19 SUTH_02692 PF01746 tRNA (Guanine-1)-methyltransferase SUTH_02693 PF01782 RimM N-terminal domain SUTH_02693 PF05239 PRC-barrel domain SUTH_02694 PF00886 Ribosomal protein S16 SUTH_02695 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family SUTH_02697 PF03631 SUTH_02697 SUTH_02698 PF03358 NADPH-dependent FMN reductase SUTH_02699 PF09842 SUTH_02699 SUTH_02700 PF00682 HMGL-like SUTH_02700 PF08502 LeuA allosteric (dimerisation) domain SUTH_02701 PF01066 CDP-alcohol phosphatidyltransferase SUTH_02702 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain SUTH_02702 PF07991 Acetohydroxy acid isomeroreductase, catalytic domain SUTH_02703 PF10369 Small subunit of acetolactate synthase SUTH_02703 PF13710 ACT domain SUTH_02704 PF00205 Thiamine pyrophosphate enzyme, central domain SUTH_02704 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain SUTH_02704 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain SUTH_02705 PF08281 Sigma-70, region 4 SUTH_02706 PF12279 SUTH_02706 SUTH_02707 PF11304 SUTH_02707 SUTH_02708 PF06271 SUTH_02708 SUTH_02709 PF03739 SUTH_02709 SUTH_02710 PF03739 SUTH_02710 SUTH_02711 PF00883 Cytosol aminopeptidase family, catalytic domain SUTH_02711 PF02789 Cytosol aminopeptidase family, N-terminal domain SUTH_02712 PF04364 DNA polymerase III chi subunit, HolC SUTH_02714 PF00043 Glutathione S-transferase, C-terminal domain SUTH_02714 PF13417 Glutathione S-transferase, N-terminal domain SUTH_02715 PF00206 Lyase SUTH_02715 PF08328 Adenylosuccinate lyase C-terminal SUTH_02716 PF10084 SUTH_02716 SUTH_02717 PF01322 Cytochrome C' SUTH_02718 PF01292 Prokaryotic cytochrome b561 SUTH_02719 PF02355 Protein export membrane protein SUTH_02719 PF07549 SecD/SecF GG Motif SUTH_02720 PF02355 Protein export membrane protein SUTH_02720 PF07549 SecD/SecF GG Motif SUTH_02720 PF13721 SecD export protein N-terminal TM region SUTH_02721 PF02699 Preprotein translocase subunit SUTH_02722 PF01702 Queuine tRNA-ribosyltransferase SUTH_02723 PF02547 Queuosine biosynthesis protein SUTH_02724 PF00027 Cyclic nucleotide-binding domain SUTH_02724 PF13545 Crp-like helix-turn-helix domain SUTH_02725 PF02705 SUTH_02725 SUTH_02726 PF13501 Sulfur oxidation protein SoxY SUTH_02727 PF08770 Sulphur oxidation protein SoxZ SUTH_02730 PF02872 5'-nucleotidase, C-terminal domain SUTH_02731 PF16576 SUTH_02731 SUTH_02732 PF00005 ABC transporter SUTH_02733 PF02687 SUTH_02733 SUTH_02733 PF12704 MacB-like periplasmic core domain SUTH_02734 PF01928 CYTH domain SUTH_02734 PF05235 CHAD domain SUTH_02735 PF00300 Histidine phosphatase superfamily (branch 1) SUTH_02736 PF01047 MarR family SUTH_02738 PF00248 Aldo/keto reductase family SUTH_02739 PF07859 alpha/beta hydrolase fold SUTH_02741 PF00072 Response regulator receiver domain SUTH_02741 PF00563 EAL domain SUTH_02741 PF00990 GGDEF domain SUTH_02742 PF00072 Response regulator receiver domain SUTH_02743 PF00512 His Kinase A (phospho-acceptor) domain SUTH_02743 PF00989 PAS fold SUTH_02743 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SUTH_02743 PF08447 PAS fold SUTH_02743 PF08448 PAS fold SUTH_02744 PF00270 DEAD/DEAH box helicase SUTH_02744 PF00271 Helicase conserved C-terminal domain SUTH_02745 PF01557 Fumarylacetoacetate (FAA) hydrolase family SUTH_02746 PF00571 CBS domain SUTH_02746 PF03445 SUTH_02746 SUTH_02746 PF10335 SUTH_02746 SUTH_02747 PF00072 Response regulator receiver domain SUTH_02748 PF02261 Aspartate decarboxylase SUTH_02749 PF02569 Pantoate-beta-alanine ligase SUTH_02750 PF02548 Ketopantoate hydroxymethyltransferase SUTH_02751 PF04342 SUTH_02751 SUTH_02752 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) SUTH_02753 PF01743 Poly A polymerase head domain SUTH_02753 PF12626 Polymerase A arginine-rich C-terminus SUTH_02753 PF12627 Probable RNA and SrmB- binding site of polymerase A SUTH_02754 PF00133 tRNA synthetases class I (I, L, M and V) SUTH_02754 PF08264 Anticodon-binding domain of tRNA SUTH_02754 PF10458 Valyl tRNA synthetase tRNA binding arm SUTH_02756 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) SUTH_02757 PF13686 DsrE/DsrF/DrsH-like family SUTH_02758 PF01206 Sulfurtransferase TusA SUTH_02759 PF04976 SUTH_02759 SUTH_02760 PF12800 4Fe-4S binding domain SUTH_02760 PF13247 4Fe-4S dicluster domain SUTH_02761 PF00384 Molybdopterin oxidoreductase SUTH_02761 PF01568 Molydopterin dinucleotide binding domain SUTH_02761 PF04879 Molybdopterin oxidoreductase Fe4S4 domain SUTH_02764 PF12850 Calcineurin-like phosphoesterase superfamily domain SUTH_02765 PF00990 GGDEF domain SUTH_02765 PF08448 PAS fold SUTH_02766 PF12831 FAD dependent oxidoreductase SUTH_02767 PF02662 SUTH_02767 SUTH_02767 PF07992 Pyridine nucleotide-disulphide oxidoreductase SUTH_02767 PF13187 4Fe-4S dicluster domain SUTH_02768 PF13534 4Fe-4S dicluster domain SUTH_02769 PF02754 SUTH_02769 SUTH_02770 PF03692 SUTH_02770 SUTH_02771 PF00890 FAD binding domain SUTH_02772 PF12139 Adenosine-5'-phosphosulfate reductase beta subunit SUTH_02772 PF13187 4Fe-4S dicluster domain SUTH_02773 PF01747 ATP-sulfurylase SUTH_02773 PF14306 PUA-like domain SUTH_02774 PF00483 Nucleotidyl transferase SUTH_02775 PF16363 SUTH_02775 SUTH_02776 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family SUTH_02777 PF03102 NeuB family SUTH_02777 PF07883 Cupin domain SUTH_02778 PF00205 Thiamine pyrophosphate enzyme, central domain SUTH_02778 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain SUTH_02778 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain SUTH_02779 PF04055 Radical SAM superfamily SUTH_02779 PF13353 4Fe-4S single cluster domain SUTH_02780 PF05050 Methyltransferase FkbM domain SUTH_02781 PF13489 Methyltransferase domain SUTH_02782 PF13489 Methyltransferase domain SUTH_02783 PF01370 NAD dependent epimerase/dehydratase family SUTH_02784 PF04138 SUTH_02784 SUTH_02786 PF00535 Glycosyl transferase family 2 SUTH_02788 PF00005 ABC transporter SUTH_02790 PF12679 SUTH_02790 SUTH_02792 PF07963 Prokaryotic N-terminal methylation motif SUTH_02793 PF13635 SUTH_02793 SUTH_02794 PF01590 GAF domain SUTH_02794 PF01966 HD domain SUTH_02794 PF13487 HD domain SUTH_02795 PF00437 Type II/IV secretion system protein SUTH_02795 PF01590 GAF domain SUTH_02795 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain SUTH_02796 PF00027 Cyclic nucleotide-binding domain SUTH_02796 PF00581 Rhodanese-like domain SUTH_02797 PF12706 Beta-lactamase superfamily domain SUTH_02798 PF00211 Adenylate and Guanylate cyclase catalytic domain SUTH_02798 PF05226 SUTH_02798 SUTH_02799 PF00498 FHA domain SUTH_02800 PF13672 Protein phosphatase 2C SUTH_02801 PF00069 Protein kinase domain SUTH_02801 PF05226 SUTH_02801 SUTH_02802 PF00549 CoA-ligase SUTH_02802 PF02629 CoA binding domain SUTH_02803 PF00549 CoA-ligase SUTH_02803 PF08442 ATP-grasp domain SUTH_02804 PF00370 FGGY family of carbohydrate kinases, N-terminal domain SUTH_02804 PF02782 FGGY family of carbohydrate kinases, C-terminal domain SUTH_02805 PF00132 Bacterial transferase hexapeptide (six repeats) SUTH_02806 PF00258 Flavodoxin SUTH_02807 PF05138 Phenylacetic acid catabolic protein SUTH_02808 PF00378 Enoyl-CoA hydratase/isomerase family SUTH_02809 PF03061 Thioesterase superfamily SUTH_02810 PF00108 Thiolase, N-terminal domain SUTH_02810 PF02803 Thiolase, C-terminal domain SUTH_02811 PF01402 Ribbon-helix-helix protein, copG family SUTH_02812 PF13470 SUTH_02812 SUTH_02813 PF08241 Methyltransferase domain SUTH_02814 PF01625 Peptide methionine sulfoxide reductase SUTH_02815 PF13417 Glutathione S-transferase, N-terminal domain SUTH_02817 PF01557 Fumarylacetoacetate (FAA) hydrolase family SUTH_02818 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily SUTH_02819 PF10932 SUTH_02819 SUTH_02820 PF01494 FAD binding domain SUTH_02821 PF00753 Metallo-beta-lactamase superfamily SUTH_02822 PF12796 Ankyrin repeats (3 copies) SUTH_02823 PF03544 Gram-negative bacterial TonB protein C-terminal SUTH_02824 PF00563 EAL domain SUTH_02824 PF00990 GGDEF domain SUTH_02825 PF01784 NIF3 (NGG1p interacting factor 3) SUTH_02826 PF13180 PDZ domain SUTH_02826 PF13365 Trypsin-like peptidase domain SUTH_02827 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain SUTH_02828 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase SUTH_02828 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg SUTH_02829 PF07992 Pyridine nucleotide-disulphide oxidoreductase SUTH_02829 PF12838 4Fe-4S dicluster domain SUTH_02829 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster SUTH_02830 PF13419 Haloacid dehalogenase-like hydrolase SUTH_02831 PF11871 SUTH_02831 SUTH_02831 PF13487 HD domain SUTH_02832 PF00563 EAL domain SUTH_02832 PF00990 GGDEF domain SUTH_02833 PF00902 Sec-independent protein translocase protein (TatC) SUTH_02834 PF02416 mttA/Hcf106 family SUTH_02835 PF02416 mttA/Hcf106 family SUTH_02836 PF01230 HIT domain SUTH_02837 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase SUTH_02838 PF01502 Phosphoribosyl-AMP cyclohydrolase SUTH_02839 PF00977 Histidine biosynthesis protein SUTH_02840 PF00977 Histidine biosynthesis protein SUTH_02841 PF00117 Glutamine amidotransferase class-I SUTH_02842 PF00475 Imidazoleglycerol-phosphate dehydratase SUTH_02843 PF00155 Aminotransferase class I and II SUTH_02844 PF00656 Caspase domain SUTH_02844 PF03781 Sulfatase-modifying factor enzyme 1 SUTH_02845 PF01850 PIN domain SUTH_02846 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system SUTH_02847 PF00815 Histidinol dehydrogenase SUTH_02848 PF01634 ATP phosphoribosyltransferase SUTH_02849 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) SUTH_02850 PF01722 BolA-like protein SUTH_02851 PF01061 SUTH_02851 SUTH_02852 PF00005 ABC transporter SUTH_02853 PF13466 STAS domain SUTH_02854 PF05494 Toluene tolerance, Ttg2 SUTH_02855 PF04333 SUTH_02855 SUTH_02856 PF02470 SUTH_02856 SUTH_02857 PF02405 SUTH_02857 SUTH_02858 PF00005 ABC transporter SUTH_02859 PF00072 Response regulator receiver domain SUTH_02859 PF00158 Sigma-54 interaction domain SUTH_02859 PF02954 Bacterial regulatory protein, Fis family SUTH_02860 PF13401 AAA domain SUTH_02861 PF00263 SUTH_02861 SUTH_02862 PF13432 Tetratricopeptide repeat SUTH_02863 PF00437 Type II/IV secretion system protein SUTH_02863 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain SUTH_02864 PF00482 Type II secretion system (T2SS), protein F SUTH_02869 PF07963 Prokaryotic N-terminal methylation motif SUTH_02870 PF00834 Ribulose-phosphate 3 epimerase family SUTH_02871 PF13411 MerR HTH family regulatory protein SUTH_02872 PF13561 Enoyl-(Acyl carrier protein) reductase SUTH_02873 PF01039 Carboxyl transferase domain SUTH_02874 PF00441 Acyl-CoA dehydrogenase, C-terminal domain SUTH_02874 PF02770 Acyl-CoA dehydrogenase, middle domain SUTH_02874 PF02771 Acyl-CoA dehydrogenase, N-terminal domain SUTH_02875 PF00378 Enoyl-CoA hydratase/isomerase family SUTH_02876 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain SUTH_02876 PF00364 Biotin-requiring enzyme SUTH_02876 PF02785 Biotin carboxylase C-terminal domain SUTH_02876 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain SUTH_02877 PF05853 Prokaryotic protein of unknown function (DUF849) SUTH_02878 PF13419 Haloacid dehalogenase-like hydrolase SUTH_02879 PF00425 chorismate binding enzyme SUTH_02879 PF04715 Anthranilate synthase component I, N terminal region SUTH_02880 PF00117 Glutamine amidotransferase class-I SUTH_02881 PF00591 Glycosyl transferase family, a/b domain SUTH_02881 PF02885 Glycosyl transferase family, helical bundle domain SUTH_02882 PF00218 Indole-3-glycerol phosphate synthase SUTH_02883 PF00072 Response regulator receiver domain SUTH_02883 PF00989 PAS fold SUTH_02883 PF07228 Stage II sporulation protein E (SpoIIE) SUTH_02884 PF00072 Response regulator receiver domain SUTH_02884 PF13581 Histidine kinase-like ATPase domain SUTH_02885 PF00512 His Kinase A (phospho-acceptor) domain SUTH_02885 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SUTH_02885 PF03924 CHASE domain SUTH_02886 PF11127 Protein of unknown function (DUF2892) SUTH_02887 PF00873 AcrB/AcrD/AcrF family SUTH_02888 PF07992 Pyridine nucleotide-disulphide oxidoreductase SUTH_02889 PF16576 SUTH_02889 SUTH_02890 PF02239 Cytochrome D1 heme domain SUTH_02890 PF13442 Cytochrome C oxidase, cbb3-type, subunit III SUTH_02891 PF00072 Response regulator receiver domain SUTH_02891 PF00512 His Kinase A (phospho-acceptor) domain SUTH_02891 PF00989 PAS fold SUTH_02891 PF01627 Hpt domain SUTH_02891 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SUTH_02891 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term SUTH_02892 PF00072 Response regulator receiver domain SUTH_02892 PF13487 HD domain SUTH_02893 PF00072 Response regulator receiver domain SUTH_02894 PF01903 CbiX SUTH_02895 PF07690 Major Facilitator Superfamily SUTH_02896 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain SUTH_02896 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain SUTH_02897 PF06808 SUTH_02897 SUTH_02898 PF04290 SUTH_02898 SUTH_02899 PF03480 Bacterial extracellular solute-binding protein, family 7 SUTH_02899 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal SUTH_02900 PF00392 Bacterial regulatory proteins, gntR family SUTH_02900 PF07729 FCD domain SUTH_02901 PF03741 SUTH_02901 SUTH_02902 PF00582 Universal stress protein family SUTH_02903 PF11227 SUTH_02903 SUTH_02905 PF01979 Amidohydrolase family SUTH_02906 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases SUTH_02907 PF02021 Uncharacterised protein family UPF0102 SUTH_02908 PF08797 HIRAN domain SUTH_02909 PF13580 SIS domain SUTH_02910 PF04972 BON domain SUTH_02911 PF01467 Cytidylyltransferase SUTH_02912 PF16868 SUTH_02912 SUTH_02913 PF03544 Gram-negative bacterial TonB protein C-terminal SUTH_02914 PF07963 Prokaryotic N-terminal methylation motif SUTH_02914 PF16732 SUTH_02914 SUTH_02915 PF12019 Type II transport protein GspH SUTH_02917 PF07963 Prokaryotic N-terminal methylation motif SUTH_02917 PF16074 SUTH_02917 SUTH_02919 PF05567 Neisseria PilC beta-propeller domain SUTH_02920 PF00436 Single-strand binding protein family SUTH_02921 PF07690 Major Facilitator Superfamily SUTH_02924 PF01569 PAP2 superfamily SUTH_02925 PF02233 NAD(P) transhydrogenase beta subunit SUTH_02926 PF01262 Alanine dehydrogenase/PNT, C-terminal domain SUTH_02926 PF05222 Alanine dehydrogenase/PNT, N-terminal domain SUTH_02926 PF12769 Domain of unknown function (DUF3814) SUTH_02927 PF01544 CorA-like Mg2+ transporter protein SUTH_02929 PF00501 AMP-binding enzyme SUTH_02929 PF13193 AMP-binding enzyme C-terminal domain SUTH_02930 PF08668 HDOD domain SUTH_02931 PF02754 SUTH_02931 SUTH_02931 PF12838 4Fe-4S dicluster domain SUTH_02932 PF01565 FAD binding domain SUTH_02932 PF02913 FAD linked oxidases, C-terminal domain SUTH_02933 PF01565 FAD binding domain SUTH_02933 PF02913 FAD linked oxidases, C-terminal domain SUTH_02934 PF05161 MOFRL family SUTH_02934 PF13660 Domain of unknown function (DUF4147) SUTH_02935 PF01261 Xylose isomerase-like TIM barrel SUTH_02936 PF01292 Prokaryotic cytochrome b561 SUTH_02937 PF04264 YceI-like domain SUTH_02938 PF04264 YceI-like domain SUTH_02942 PF00717 Peptidase S24-like SUTH_02943 PF00111 2Fe-2S iron-sulfur cluster binding domain SUTH_02944 PF00563 EAL domain SUTH_02944 PF00990 GGDEF domain SUTH_02944 PF08448 PAS fold SUTH_02944 PF13426 PAS domain SUTH_02945 PF01070 FMN-dependent dehydrogenase SUTH_02947 PF14384 SUTH_02947 SUTH_02948 PF01609 Transposase DDE domain SUTH_02948 PF05598 SUTH_02948 SUTH_02951 PF01850 PIN domain SUTH_02952 PF04014 Antidote-toxin recognition MazE SUTH_02953 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit SUTH_02954 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit SUTH_02954 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit SUTH_02955 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains SUTH_02957 PF00146 NADH dehydrogenase SUTH_02958 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains SUTH_02958 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus SUTH_02959 PF00916 SUTH_02959 SUTH_02959 PF01740 STAS domain SUTH_02960 PF01923 Cobalamin adenosyltransferase SUTH_02961 PF00990 GGDEF domain SUTH_02961 PF08448 PAS fold SUTH_02961 PF12860 SUTH_02961 SUTH_02962 PF10006 SUTH_02962 SUTH_02963 PF02663 FmdE, Molybdenum formylmethanofuran dehydrogenase operon SUTH_02964 PF00027 Cyclic nucleotide-binding domain SUTH_02965 PF01040 UbiA prenyltransferase family SUTH_02966 PF13231 SUTH_02966 SUTH_02967 PF00793 DAHP synthetase I family SUTH_02968 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SUTH_02968 PF00672 HAMP domain SUTH_02968 PF12729 SUTH_02968 SUTH_02969 PF17200 SUTH_02969 SUTH_02970 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg SUTH_02970 PF17147 SUTH_02970 SUTH_02971 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain SUTH_02972 PF00037 4Fe-4S binding domain SUTH_02972 PF07992 Pyridine nucleotide-disulphide oxidoreductase SUTH_02972 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster SUTH_02973 PF00072 Response regulator receiver domain SUTH_02973 PF00990 GGDEF domain SUTH_02973 PF08668 HDOD domain SUTH_02974 PF04055 Radical SAM superfamily SUTH_02976 PF00656 Caspase domain SUTH_02976 PF08238 Sel1 repeat SUTH_02977 PF00501 AMP-binding enzyme SUTH_02977 PF13193 AMP-binding enzyme C-terminal domain SUTH_02978 PF00676 Dehydrogenase E1 component SUTH_02979 PF02779 Transketolase, pyrimidine binding domain SUTH_02979 PF02780 Transketolase, C-terminal domain SUTH_02980 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) SUTH_02980 PF00364 Biotin-requiring enzyme SUTH_02980 PF02817 e3 binding domain SUTH_02981 PF00550 Phosphopantetheine attachment site SUTH_02982 PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) SUTH_02984 PF08240 Alcohol dehydrogenase GroES-like domain SUTH_02985 PF05362 Lon protease (S16) C-terminal proteolytic domain SUTH_02985 PF13654 AAA domain SUTH_02986 PF04358 DsrC like protein SUTH_02987 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg SUTH_02987 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain SUTH_02987 PF13237 4Fe-4S dicluster domain SUTH_02988 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase SUTH_02989 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain SUTH_02989 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain SUTH_02990 PF00731 AIR carboxylase SUTH_02991 PF01218 Coproporphyrinogen III oxidase SUTH_02992 PF07219 SUTH_02992 SUTH_02993 PF04375 SUTH_02993 SUTH_02994 PF02602 Uroporphyrinogen-III synthase HemD SUTH_02995 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain SUTH_02995 PF03900 Porphobilinogen deaminase, C-terminal domain SUTH_02996 PF00311 Phosphoenolpyruvate carboxylase SUTH_02997 PF00768 D-alanyl-D-alanine carboxypeptidase SUTH_02998 PF01734 Patatin-like phospholipase SUTH_02999 PF00390 Malic enzyme, N-terminal domain SUTH_02999 PF01515 Phosphate acetyl/butaryl transferase SUTH_02999 PF03949 Malic enzyme, NAD binding domain SUTH_03000 PF00821 Phosphoenolpyruvate carboxykinase SUTH_03000 PF17297 SUTH_03000 SUTH_03001 PF00155 Aminotransferase class I and II SUTH_03002 PF07382 SUTH_03002 SUTH_03004 PF01510 N-acetylmuramoyl-L-alanine amidase SUTH_03005 PF00072 Response regulator receiver domain SUTH_03005 PF00158 Sigma-54 interaction domain SUTH_03005 PF02954 Bacterial regulatory protein, Fis family SUTH_03006 PF00512 His Kinase A (phospho-acceptor) domain SUTH_03006 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SUTH_03006 PF13188 PAS domain SUTH_03009 PF00348 Polyprenyl synthetase SUTH_03010 PF00072 Response regulator receiver domain SUTH_03010 PF04397 LytTr DNA-binding domain SUTH_03011 PF06580 SUTH_03011 SUTH_03012 PF00206 Lyase SUTH_03012 PF14698 Argininosuccinate lyase C-terminal SUTH_03013 PF00027 Cyclic nucleotide-binding domain SUTH_03013 PF00069 Protein kinase domain SUTH_03014 PF03881 Fructosamine kinase SUTH_03015 PF00462 Glutaredoxin SUTH_03016 PF00174 Oxidoreductase molybdopterin binding domain SUTH_03017 PF01794 SUTH_03017 SUTH_03018 PF08241 Methyltransferase domain SUTH_03019 PF04379 Protein of unknown function (DUF525) SUTH_03020 PF00211 Adenylate and Guanylate cyclase catalytic domain SUTH_03022 PF07963 Prokaryotic N-terminal methylation motif SUTH_03023 PF00999 Sodium/hydrogen exchanger family SUTH_03023 PF02080 TrkA-C domain SUTH_03023 PF02254 TrkA-N domain SUTH_03024 PF00571 CBS domain SUTH_03024 PF01380 SIS domain SUTH_03025 PF08282 haloacid dehalogenase-like hydrolase SUTH_03026 PF06835 Lipopolysaccharide-assembly, LptC-related SUTH_03027 PF03968 OstA-like protein SUTH_03028 PF00378 Enoyl-CoA hydratase/isomerase family SUTH_03029 PF09361 SUTH_03029 SUTH_03030 PF00155 Aminotransferase class I and II SUTH_03031 PF00990 GGDEF domain SUTH_03032 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase SUTH_03033 PF00563 EAL domain SUTH_03033 PF00989 PAS fold SUTH_03033 PF00990 GGDEF domain SUTH_03033 PF08447 PAS fold SUTH_03033 PF13426 PAS domain SUTH_03034 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase SUTH_03034 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase SUTH_03035 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase SUTH_03035 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase SUTH_03036 PF13875 SUTH_03036 SUTH_03037 PF00990 GGDEF domain SUTH_03037 PF13426 PAS domain SUTH_03038 PF01960 ArgJ family SUTH_03039 PF01850 PIN domain SUTH_03041 PF03710 Glutamate-ammonia ligase adenylyltransferase SUTH_03041 PF08335 GlnD PII-uridylyltransferase SUTH_03042 PF05170 SUTH_03042 SUTH_03042 PF13116 SUTH_03042 SUTH_03042 PF13502 SUTH_03042 SUTH_03043 PF00795 Carbon-nitrogen hydrolase SUTH_03044 PF01523 Putative modulator of DNA gyrase SUTH_03045 PF00027 Cyclic nucleotide-binding domain SUTH_03045 PF00990 GGDEF domain SUTH_03046 PF00994 Probable molybdopterin binding domain SUTH_03047 PF07264 Etoposide-induced protein 2 SUTH_03048 PF00270 DEAD/DEAH box helicase SUTH_03048 PF00271 Helicase conserved C-terminal domain SUTH_03048 PF04408 Helicase associated domain (HA2) SUTH_03048 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold SUTH_03048 PF11898 SUTH_03048 SUTH_03049 PF02537 SUTH_03049 SUTH_03050 PF00749 tRNA synthetases class I (E and Q), catalytic domain SUTH_03050 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain SUTH_03051 PF02661 Fic/DOC family SUTH_03052 PF16872 SUTH_03052 SUTH_03053 PF08378 SUTH_03053 SUTH_03053 PF13245 Part of AAA domain SUTH_03053 PF13361 UvrD-like helicase C-terminal domain SUTH_03053 PF13538 UvrD-like helicase C-terminal domain SUTH_03054 PF12276 SUTH_03054 SUTH_03055 PF00563 EAL domain SUTH_03055 PF00571 CBS domain SUTH_03055 PF00989 PAS fold SUTH_03055 PF00990 GGDEF domain SUTH_03055 PF08447 PAS fold SUTH_03055 PF13426 PAS domain SUTH_03056 PF01627 Hpt domain SUTH_03056 PF13487 HD domain SUTH_03057 PF00316 Fructose-1-6-bisphosphatase SUTH_03058 PF00072 Response regulator receiver domain SUTH_03058 PF13432 Tetratricopeptide repeat SUTH_03058 PF14559 Tetratricopeptide repeat SUTH_03059 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SUTH_03060 PF00596 Class II Aldolase and Adducin N-terminal domain SUTH_03060 PF13561 Enoyl-(Acyl carrier protein) reductase SUTH_03061 PF01008 Initiation factor 2 subunit family SUTH_03062 PF01043 SecA preprotein cross-linking domain SUTH_03062 PF02810 SEC-C motif SUTH_03062 PF07516 SecA Wing and Scaffold domain SUTH_03062 PF07517 SecA DEAD-like domain SUTH_03063 PF01551 Peptidase family M23 SUTH_03064 PF05258 SUTH_03064 SUTH_03066 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase SUTH_03067 PF00091 Tubulin/FtsZ family, GTPase domain SUTH_03067 PF12327 FtsZ family, C-terminal domain SUTH_03068 PF02491 SHS2 domain inserted in FTSA SUTH_03068 PF14450 Cell division protein FtsA SUTH_03069 PF03799 Cell division protein FtsQ SUTH_03069 PF08478 POTRA domain, FtsQ-type SUTH_03070 PF01820 D-ala D-ala ligase N-terminus SUTH_03070 PF07478 D-ala D-ala ligase C-terminus SUTH_03071 PF01565 FAD binding domain SUTH_03071 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain SUTH_03072 PF01225 Mur ligase family, catalytic domain SUTH_03072 PF02875 Mur ligase family, glutamate ligase domain SUTH_03072 PF08245 Mur ligase middle domain SUTH_03073 PF03033 Glycosyltransferase family 28 N-terminal domain SUTH_03073 PF04101 Glycosyltransferase family 28 C-terminal domain SUTH_03074 PF01098 SUTH_03074 SUTH_03075 PF02875 Mur ligase family, glutamate ligase domain SUTH_03075 PF08245 Mur ligase middle domain SUTH_03076 PF00953 Glycosyl transferase family 4 SUTH_03076 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 SUTH_03077 PF01225 Mur ligase family, catalytic domain SUTH_03077 PF02875 Mur ligase family, glutamate ligase domain SUTH_03077 PF08245 Mur ligase middle domain SUTH_03078 PF01225 Mur ligase family, catalytic domain SUTH_03078 PF02875 Mur ligase family, glutamate ligase domain SUTH_03078 PF08245 Mur ligase middle domain SUTH_03079 PF00905 Penicillin binding protein transpeptidase domain SUTH_03079 PF03717 Penicillin-binding Protein dimerisation domain SUTH_03080 PF04999 SUTH_03080 SUTH_03081 PF01795 MraW methylase family SUTH_03082 PF02381 MraZ protein SUTH_03083 PF02666 SUTH_03083 SUTH_03084 PF00999 Sodium/hydrogen exchanger family SUTH_03085 PF01435 Peptidase family M48 SUTH_03086 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SUTH_03086 PF03466 LysR substrate binding domain SUTH_03088 PF00582 Universal stress protein family SUTH_03089 PF11322 SUTH_03089 SUTH_03090 PF02254 TrkA-N domain SUTH_03090 PF07885 Ion channel SUTH_03091 PF00999 Sodium/hydrogen exchanger family SUTH_03091 PF02254 TrkA-N domain SUTH_03092 PF01545 Cation efflux family SUTH_03092 PF16916 SUTH_03092 SUTH_03093 PF00122 E1-E2 ATPase SUTH_03093 PF00689 Cation transporting ATPase, C-terminus SUTH_03093 PF00690 Cation transporter/ATPase, N-terminus SUTH_03093 PF08282 haloacid dehalogenase-like hydrolase SUTH_03093 PF13246 Putative hydrolase of sodium-potassium ATPase alpha subunit SUTH_03094 PF00563 EAL domain SUTH_03094 PF00990 GGDEF domain SUTH_03094 PF02743 Cache domain SUTH_03094 PF13426 PAS domain SUTH_03095 PF13098 Thioredoxin-like domain SUTH_03096 PF02589 Uncharacterised ACR, YkgG family COG1556 SUTH_03097 PF02589 Uncharacterised ACR, YkgG family COG1556 SUTH_03097 PF11870 SUTH_03097 SUTH_03097 PF13183 4Fe-4S dicluster domain SUTH_03098 PF02754 SUTH_03098 SUTH_03099 PF01614 Bacterial transcriptional regulator SUTH_03099 PF09339 IclR helix-turn-helix domain SUTH_03100 PF00829 Ribosomal prokaryotic L21 protein SUTH_03101 PF01016 Ribosomal L27 protein SUTH_03102 PF01018 GTP1/OBG SUTH_03102 PF01926 50S ribosome-binding GTPase SUTH_03103 PF00696 Amino acid kinase family SUTH_03103 PF01472 PUA domain SUTH_03104 PF01850 PIN domain SUTH_03105 PF04014 Antidote-toxin recognition MazE SUTH_03106 PF01797 Transposase IS200 like SUTH_03107 PF13609 Gram-negative porin SUTH_03108 PF05016 Plasmid stabilisation system protein SUTH_03109 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system SUTH_03115 PF00579 tRNA synthetases class I (W and Y) SUTH_03115 PF01479 S4 domain SUTH_03116 PF01551 Peptidase family M23 SUTH_03117 PF03702 Uncharacterised protein family (UPF0075) SUTH_03118 PF01521 Iron-sulphur cluster biosynthesis SUTH_03119 PF04519 SUTH_03119 SUTH_03121 PF01118 Semialdehyde dehydrogenase, NAD binding domain SUTH_03121 PF02774 Semialdehyde dehydrogenase, dimerisation domain SUTH_03122 PF00380 Ribosomal protein S9/S16 SUTH_03123 PF00572 Ribosomal protein L13 SUTH_03124 PF04143 SUTH_03124 SUTH_03125 PF06508 Queuosine biosynthesis protein QueC SUTH_03127 PF00919 Uncharacterized protein family UPF0004 SUTH_03127 PF01938 TRAM domain SUTH_03127 PF04055 Radical SAM superfamily SUTH_03128 PF02562 PhoH-like protein SUTH_03129 PF02130 Uncharacterized protein family UPF0054 SUTH_03130 PF00571 CBS domain SUTH_03130 PF03471 Transporter associated domain SUTH_03131 PF00795 Carbon-nitrogen hydrolase SUTH_03133 PF02091 Glycyl-tRNA synthetase alpha subunit SUTH_03134 PF02092 SUTH_03134 SUTH_03134 PF05746 DALR anticodon binding domain SUTH_03135 PF13242 HAD-hyrolase-like SUTH_03136 PF01553 Acyltransferase SUTH_03137 PF01863 Protein of unknown function DUF45 SUTH_03138 PF01863 Protein of unknown function DUF45 SUTH_03139 PF01609 Transposase DDE domain SUTH_03139 PF05598 SUTH_03139 SUTH_03140 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily SUTH_03142 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase SUTH_03143 PF01980 Uncharacterised protein family UPF0066 SUTH_03147 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase SUTH_03148 PF00072 Response regulator receiver domain SUTH_03148 PF00512 His Kinase A (phospho-acceptor) domain SUTH_03148 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SUTH_03149 PF01040 UbiA prenyltransferase family SUTH_03150 PF00072 Response regulator receiver domain SUTH_03150 PF00486 Transcriptional regulatory protein, C terminal SUTH_03151 PF00512 His Kinase A (phospho-acceptor) domain SUTH_03151 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SUTH_03151 PF08521 SUTH_03151 SUTH_03153 PF08238 Sel1 repeat SUTH_03154 PF00916 SUTH_03154 SUTH_03154 PF01740 STAS domain SUTH_03155 PF00691 OmpA family SUTH_03156 PF00691 OmpA family SUTH_03157 PF00270 DEAD/DEAH box helicase SUTH_03157 PF00271 Helicase conserved C-terminal domain SUTH_03157 PF17191 SUTH_03157 SUTH_03158 PF01042 Endoribonuclease L-PSP SUTH_03159 PF02623 FliW protein SUTH_03160 PF05036 Sporulation related domain SUTH_03161 PF10975 SUTH_03161 SUTH_03162 PF01053 Cys/Met metabolism PLP-dependent enzyme SUTH_03163 PF02698 DUF218 domain SUTH_03164 PF00994 Probable molybdopterin binding domain SUTH_03165 PF00005 ABC transporter SUTH_03167 PF00883 Cytosol aminopeptidase family, catalytic domain SUTH_03168 PF00303 Thymidylate synthase SUTH_03169 PF02685 Glucokinase SUTH_03170 PF11154 SUTH_03170 SUTH_03171 PF00128 Alpha amylase, catalytic domain SUTH_03171 PF02806 Alpha amylase, C-terminal all-beta domain SUTH_03171 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) SUTH_03172 PF00483 Nucleotidyl transferase SUTH_03173 PF03065 Glycosyl hydrolase family 57 SUTH_03174 PF03065 Glycosyl hydrolase family 57 SUTH_03174 PF09094 Domain of unknown function (DUF1925) SUTH_03174 PF09095 Domain of unknown function (DUF1926) SUTH_03175 PF00343 Carbohydrate phosphorylase SUTH_03175 PF11897 SUTH_03175 SUTH_03176 PF00342 Phosphoglucose isomerase SUTH_03177 PF00534 Glycosyl transferases group 1 SUTH_03177 PF08323 Starch synthase catalytic domain SUTH_03178 PF00186 Dihydrofolate reductase SUTH_03179 PF00656 Caspase domain SUTH_03180 PF01276 Orn/Lys/Arg decarboxylase, major domain SUTH_03180 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain SUTH_03180 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain SUTH_03181 PF00692 dUTPase SUTH_03182 PF13500 AAA domain SUTH_03183 PF00202 Aminotransferase class-III SUTH_03184 PF00155 Aminotransferase class I and II SUTH_03185 PF01883 Domain of unknown function DUF59 SUTH_03185 PF10609 ParA/MinD ATPase like SUTH_03186 PF13470 SUTH_03186 SUTH_03187 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system SUTH_03188 PF00512 His Kinase A (phospho-acceptor) domain SUTH_03188 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SUTH_03191 PF01588 Putative tRNA binding domain SUTH_03191 PF09334 tRNA synthetases class I (M) SUTH_03192 PF00708 Acylphosphatase SUTH_03193 PF00578 AhpC/TSA family SUTH_03193 PF10417 C-terminal domain of 1-Cys peroxiredoxin SUTH_03196 PF00211 Adenylate and Guanylate cyclase catalytic domain SUTH_03196 PF05226 SUTH_03196 SUTH_03197 PF02405 SUTH_03197 SUTH_03198 PF05226 SUTH_03198 SUTH_03199 PF00656 Caspase domain SUTH_03199 PF14326 SUTH_03199 SUTH_03201 PF02470 SUTH_03201 SUTH_03203 PF14326 SUTH_03203 SUTH_03204 PF13279 Thioesterase-like superfamily SUTH_03205 PF03061 Thioesterase superfamily SUTH_03206 PF00656 Caspase domain SUTH_03207 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SUTH_03207 PF08376 Nitrate and nitrite sensing SUTH_03209 PF01336 OB-fold nucleic acid binding domain SUTH_03209 PF02811 PHP domain SUTH_03209 PF07733 Bacterial DNA polymerase III alpha subunit SUTH_03209 PF14579 Helix-hairpin-helix motif SUTH_03210 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain SUTH_03211 PF01814 Hemerythrin HHE cation binding domain SUTH_03212 PF00107 Zinc-binding dehydrogenase SUTH_03212 PF08240 Alcohol dehydrogenase GroES-like domain SUTH_03213 PF00390 Malic enzyme, N-terminal domain SUTH_03213 PF01515 Phosphate acetyl/butaryl transferase SUTH_03213 PF03949 Malic enzyme, NAD binding domain SUTH_03214 PF00072 Response regulator receiver domain SUTH_03214 PF00563 EAL domain SUTH_03214 PF00990 GGDEF domain SUTH_03214 PF01590 GAF domain SUTH_03215 PF00072 Response regulator receiver domain SUTH_03215 PF00196 Bacterial regulatory proteins, luxR family SUTH_03216 PF05227 CHASE3 domain SUTH_03216 PF07730 Histidine kinase SUTH_03217 PF13614 AAA domain SUTH_03219 PF00665 Integrase core domain SUTH_03219 PF13565 SUTH_03219 SUTH_03221 PF01381 Helix-turn-helix SUTH_03222 PF05015 Plasmid maintenance system killer protein SUTH_03223 PF13561 Enoyl-(Acyl carrier protein) reductase SUTH_03224 PF00561 alpha/beta hydrolase fold SUTH_03225 PF12686 SUTH_03225 SUTH_03226 PF02384 N-6 DNA Methylase SUTH_03226 PF07669 Eco57I restriction-modification methylase SUTH_03226 PF12950 TaqI-like C-terminal specificity domain SUTH_03227 PF00580 UvrD/REP helicase N-terminal domain SUTH_03227 PF13361 UvrD-like helicase C-terminal domain SUTH_03229 PF04773 FecR protein SUTH_03229 PF05036 Sporulation related domain SUTH_03230 PF00133 tRNA synthetases class I (I, L, M and V) SUTH_03230 PF08264 Anticodon-binding domain of tRNA SUTH_03230 PF09334 tRNA synthetases class I (M) SUTH_03230 PF13603 Leucyl-tRNA synthetase, Domain 2 SUTH_03232 PF06144 DNA polymerase III, delta subunit SUTH_03233 PF00171 Aldehyde dehydrogenase family SUTH_03234 PF00990 GGDEF domain SUTH_03235 PF13598 SUTH_03235 SUTH_03236 PF16036 SUTH_03236 SUTH_03237 PF02515 CoA-transferase family III SUTH_03238 PF08448 PAS fold SUTH_03239 PF00563 EAL domain SUTH_03239 PF00990 GGDEF domain SUTH_03239 PF11849 SUTH_03239 SUTH_03240 PF00027 Cyclic nucleotide-binding domain SUTH_03240 PF00916 SUTH_03240 SUTH_03240 PF01740 STAS domain SUTH_03241 PF16868 SUTH_03241 SUTH_03242 PF06808 SUTH_03242 SUTH_03243 PF08905 SUTH_03243 SUTH_03244 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain SUTH_03245 PF00589 Phage integrase family SUTH_03245 PF02899 Phage integrase, N-terminal SAM-like domain SUTH_03246 PF06764 Protein of unknown function (DUF1223) SUTH_03247 PF04073 Aminoacyl-tRNA editing domain SUTH_03248 PF03458 SUTH_03248 SUTH_03249 PF02152 Dihydroneopterin aldolase SUTH_03250 PF02660 SUTH_03250 SUTH_03251 PF01814 Hemerythrin HHE cation binding domain SUTH_03252 PF00027 Cyclic nucleotide-binding domain SUTH_03253 PF00814 Glycoprotease family SUTH_03255 PF04055 Radical SAM superfamily SUTH_03256 PF00207 Alpha-2-macroglobulin family SUTH_03256 PF01835 MG2 domain SUTH_03256 PF07703 Alpha-2-macroglobulin family N-terminal region SUTH_03256 PF11974 Alpha-2-macroglobulin MG1 domain SUTH_03259 PF00665 Integrase core domain SUTH_03259 PF13565 SUTH_03259 SUTH_03262 PF00905 Penicillin binding protein transpeptidase domain SUTH_03262 PF00912 Transglycosylase SUTH_03262 PF06832 SUTH_03262 SUTH_03263 PF01165 Ribosomal protein S21 SUTH_03264 PF09424 Yqey-like protein SUTH_03265 PF01807 CHC2 zinc finger SUTH_03265 PF08275 DNA primase catalytic core, N-terminal domain SUTH_03265 PF08278 DNA primase DnaG DnaB-binding SUTH_03265 PF10410 DnaB-helicase binding domain of primase SUTH_03265 PF13662 Toprim domain SUTH_03266 PF00140 Sigma-70 factor, region 1 SUTH_03266 PF03979 Sigma-70 factor, region 1 SUTH_03266 PF04539 Sigma-70 region 3 SUTH_03266 PF04542 Sigma-70 region 2 SUTH_03266 PF04545 Sigma-70, region 4 SUTH_03266 PF04546 Sigma-70, non-essential region SUTH_03269 PF01734 Patatin-like phospholipase SUTH_03270 PF00929 Exonuclease SUTH_03271 PF04055 Radical SAM superfamily SUTH_03273 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain SUTH_03273 PF05221 S-adenosyl-L-homocysteine hydrolase SUTH_03274 PF04020 SUTH_03274 SUTH_03275 PF02219 Methylenetetrahydrofolate reductase SUTH_03276 PF00072 Response regulator receiver domain SUTH_03276 PF00512 His Kinase A (phospho-acceptor) domain SUTH_03276 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SUTH_03276 PF09984 SUTH_03276 SUTH_03277 PF04392 ABC transporter substrate binding protein SUTH_03278 PF00593 TonB dependent receptor SUTH_03278 PF07715 TonB-dependent Receptor Plug Domain SUTH_03279 PF00892 EamA-like transporter family SUTH_03280 PF05872 SUTH_03280 SUTH_03281 PF01709 Transcriptional regulator SUTH_03282 PF13242 HAD-hyrolase-like SUTH_03282 PF13344 Haloacid dehalogenase-like hydrolase SUTH_03283 PF00578 AhpC/TSA family SUTH_03284 PF00892 EamA-like transporter family SUTH_03285 PF02075 Crossover junction endodeoxyribonuclease RuvC SUTH_03287 PF01330 RuvA N terminal domain SUTH_03287 PF07499 RuvA, C-terminal domain SUTH_03287 PF14520 Helix-hairpin-helix domain SUTH_03288 PF05491 Holliday junction DNA helicase ruvB C-terminus SUTH_03288 PF05496 Holliday junction DNA helicase ruvB N-terminus SUTH_03289 PF00535 Glycosyl transferase family 2 SUTH_03289 PF02709 N-terminal domain of galactosyltransferase SUTH_03289 PF08241 Methyltransferase domain SUTH_03292 PF03061 Thioesterase superfamily SUTH_03293 PF01618 SUTH_03293 SUTH_03294 PF02472 Biopolymer transport protein ExbD/TolR SUTH_03295 PF13103 TonB C terminal SUTH_03296 PF04052 TolB amino-terminal domain SUTH_03296 PF07676 WD40-like Beta Propeller Repeat SUTH_03297 PF00691 OmpA family SUTH_03298 PF13174 Tetratricopeptide repeat SUTH_03298 PF16331 SUTH_03298 SUTH_03299 PF04055 Radical SAM superfamily SUTH_03299 PF13394 4Fe-4S single cluster domain SUTH_03300 PF13380 CoA binding domain SUTH_03301 PF00749 tRNA synthetases class I (E and Q), catalytic domain SUTH_03302 PF00085 Thioredoxin SUTH_03303 PF13188 PAS domain SUTH_03304 PF01926 50S ribosome-binding GTPase SUTH_03304 PF06071 Protein of unknown function (DUF933) SUTH_03305 PF01195 Peptidyl-tRNA hydrolase SUTH_03306 PF01386 Ribosomal L25p family SUTH_03306 PF14693 Ribosomal protein TL5, C-terminal domain SUTH_03307 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase SUTH_03307 PF14572 Phosphoribosyl synthetase-associated domain SUTH_03309 PF00288 GHMP kinases N terminal domain SUTH_03309 PF08544 GHMP kinases C terminal SUTH_03310 PF03550 Outer membrane lipoprotein LolB SUTH_03311 PF07721 Tetratricopeptide repeat SUTH_03311 PF13432 Tetratricopeptide repeat SUTH_03311 PF14559 Tetratricopeptide repeat SUTH_03312 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain SUTH_03312 PF06827 Zinc finger found in FPG and IleRS SUTH_03312 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain SUTH_03313 PF00037 4Fe-4S binding domain SUTH_03314 PF01467 Cytidylyltransferase SUTH_03315 PF03602 Conserved hypothetical protein 95 SUTH_03316 PF05193 Peptidase M16 inactive domain SUTH_03317 PF00675 Insulinase (Peptidase family M16) SUTH_03317 PF05193 Peptidase M16 inactive domain SUTH_03318 PF00448 SRP54-type protein, GTPase domain SUTH_03318 PF02881 SRP54-type protein, helical bundle domain SUTH_03319 PF00005 ABC transporter SUTH_03322 PF04542 Sigma-70 region 2 SUTH_03322 PF04545 Sigma-70, region 4 SUTH_03323 PF02630 SCO1/SenC SUTH_03324 PF01040 UbiA prenyltransferase family SUTH_03325 PF02630 SCO1/SenC SUTH_03326 PF00115 Cytochrome C and Quinol oxidase polypeptide I SUTH_03327 PF00116 Cytochrome C oxidase subunit II, periplasmic domain SUTH_03329 PF00510 Cytochrome c oxidase subunit III SUTH_03330 PF00034 Cytochrome c SUTH_03331 PF01225 Mur ligase family, catalytic domain SUTH_03331 PF02875 Mur ligase family, glutamate ligase domain SUTH_03331 PF08245 Mur ligase middle domain SUTH_03333 PF08534 Redoxin SUTH_03334 PF01220 Dehydroquinase class II SUTH_03335 PF00364 Biotin-requiring enzyme SUTH_03336 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain SUTH_03336 PF02785 Biotin carboxylase C-terminal domain SUTH_03336 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain SUTH_03337 PF06325 Ribosomal protein L11 methyltransferase (PrmA) SUTH_03338 PF11906 SUTH_03338 SUTH_03338 PF13719 SUTH_03338 SUTH_03339 PF00294 pfkB family carbohydrate kinase SUTH_03340 PF05433 SUTH_03340 SUTH_03341 PF16363 SUTH_03341 SUTH_03342 PF00149 Calcineurin-like phosphoesterase SUTH_03343 PF01075 Glycosyltransferase family 9 (heptosyltransferase) SUTH_03344 PF02719 Polysaccharide biosynthesis protein SUTH_03344 PF13727 CoA-binding domain SUTH_03345 PF00953 Glycosyl transferase family 4 SUTH_03346 PF00534 Glycosyl transferases group 1 SUTH_03346 PF13579 Glycosyl transferase 4-like domain SUTH_03347 PF01370 NAD dependent epimerase/dehydratase family SUTH_03349 PF00535 Glycosyl transferase family 2 SUTH_03350 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family SUTH_03351 PF00483 Nucleotidyl transferase SUTH_03353 PF16363 SUTH_03353 SUTH_03354 PF02310 B12 binding domain SUTH_03354 PF04055 Radical SAM superfamily SUTH_03356 PF02348 Cytidylyltransferase SUTH_03357 PF13489 Methyltransferase domain SUTH_03359 PF03328 HpcH/HpaI aldolase/citrate lyase family SUTH_03360 PF13419 Haloacid dehalogenase-like hydrolase SUTH_03361 PF01370 NAD dependent epimerase/dehydratase family SUTH_03362 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain SUTH_03362 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain SUTH_03363 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase SUTH_03365 PF02543 Carbamoyltransferase SUTH_03365 PF16861 SUTH_03365 SUTH_03368 PF08241 Methyltransferase domain SUTH_03369 PF13847 Methyltransferase domain SUTH_03370 PF02543 Carbamoyltransferase SUTH_03370 PF16861 SUTH_03370 SUTH_03371 PF13847 Methyltransferase domain SUTH_03372 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family SUTH_03373 PF04055 Radical SAM superfamily SUTH_03373 PF13186 Iron-sulfur cluster-binding domain SUTH_03374 PF13480 Acetyltransferase (GNAT) domain SUTH_03375 PF09940 Domain of unknown function (DUF2172) SUTH_03375 PF16221 SUTH_03375 SUTH_03375 PF16254 SUTH_03375 SUTH_03376 PF03102 NeuB family SUTH_03376 PF08666 SAF domain SUTH_03377 PF00535 Glycosyl transferase family 2 SUTH_03378 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family SUTH_03379 PF00465 Iron-containing alcohol dehydrogenase SUTH_03380 PF02357 Transcription termination factor nusG SUTH_03381 PF13412 Winged helix-turn-helix DNA-binding SUTH_03382 PF01370 NAD dependent epimerase/dehydratase family SUTH_03383 PF00535 Glycosyl transferase family 2 SUTH_03383 PF01370 NAD dependent epimerase/dehydratase family SUTH_03384 PF00132 Bacterial transferase hexapeptide (six repeats) SUTH_03388 PF01370 NAD dependent epimerase/dehydratase family SUTH_03389 PF16363 SUTH_03389 SUTH_03390 PF00483 Nucleotidyl transferase SUTH_03390 PF01050 Mannose-6-phosphate isomerase SUTH_03391 PF14743 DNA ligase OB-like domain SUTH_03392 PF01370 NAD dependent epimerase/dehydratase family SUTH_03393 PF00535 Glycosyl transferase family 2 SUTH_03394 PF01075 Glycosyltransferase family 9 (heptosyltransferase) SUTH_03395 PF00534 Glycosyl transferases group 1 SUTH_03395 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) SUTH_03396 PF02321 Outer membrane efflux protein SUTH_03397 PF00581 Rhodanese-like domain SUTH_03398 PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) SUTH_03399 PF00873 AcrB/AcrD/AcrF family SUTH_03400 PF16576 SUTH_03400 SUTH_03401 PF00440 Bacterial regulatory proteins, tetR family SUTH_03401 PF16859 SUTH_03401 SUTH_03402 PF00478 IMP dehydrogenase / GMP reductase domain SUTH_03403 PF13472 GDSL-like Lipase/Acylhydrolase family SUTH_03404 PF00194 Eukaryotic-type carbonic anhydrase SUTH_03405 PF01964 ThiC family SUTH_03405 PF13667 ThiC-associated domain SUTH_03406 PF11871 SUTH_03406 SUTH_03406 PF13487 HD domain SUTH_03407 PF02673 SUTH_03407 SUTH_03408 PF05728 Uncharacterised protein family (UPF0227) SUTH_03409 PF00892 EamA-like transporter family SUTH_03410 PF08241 Methyltransferase domain SUTH_03411 PF00773 RNB domain SUTH_03412 PF03544 Gram-negative bacterial TonB protein C-terminal SUTH_03413 PF01488 Shikimate / quinate 5-dehydrogenase SUTH_03413 PF08501 Shikimate dehydrogenase substrate binding domain SUTH_03414 PF00912 Transglycosylase SUTH_03415 PF01544 CorA-like Mg2+ transporter protein SUTH_03415 PF03448 MgtE intracellular N domain SUTH_03416 PF00893 Small Multidrug Resistance protein SUTH_03417 PF00202 Aminotransferase class-III SUTH_03418 PF02581 Thiamine monophosphate synthase/TENI SUTH_03419 PF08543 Phosphomethylpyrimidine kinase SUTH_03420 PF00072 Response regulator receiver domain SUTH_03421 PF00072 Response regulator receiver domain SUTH_03422 PF01584 CheW-like domain SUTH_03423 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SUTH_03424 PF00072 Response regulator receiver domain SUTH_03424 PF01584 CheW-like domain SUTH_03424 PF01627 Hpt domain SUTH_03424 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SUTH_03425 PF13669 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily SUTH_03426 PF00990 GGDEF domain SUTH_03426 PF07695 SUTH_03426 SUTH_03426 PF07696 7TMR-DISM extracellular 2 SUTH_03427 PF00724 NADH:flavin oxidoreductase / NADH oxidase family SUTH_03428 PF04966 Carbohydrate-selective porin, OprB family SUTH_03429 PF02321 Outer membrane efflux protein SUTH_03430 PF11582 Protein of unknown function (DUF3240) SUTH_03431 PF00873 AcrB/AcrD/AcrF family SUTH_03432 PF16576 SUTH_03432 SUTH_03433 PF00512 His Kinase A (phospho-acceptor) domain SUTH_03433 PF00672 HAMP domain SUTH_03433 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SUTH_03434 PF00072 Response regulator receiver domain SUTH_03434 PF00486 Transcriptional regulatory protein, C terminal SUTH_03435 PF11845 SUTH_03435 SUTH_03438 PF00034 Cytochrome c SUTH_03440 PF13501 Sulfur oxidation protein SoxY SUTH_03441 PF08770 Sulphur oxidation protein SoxZ SUTH_03443 PF00581 Rhodanese-like domain SUTH_03444 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain SUTH_03444 PF00364 Biotin-requiring enzyme SUTH_03444 PF02785 Biotin carboxylase C-terminal domain SUTH_03444 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain SUTH_03445 PF01039 Carboxyl transferase domain SUTH_03446 PF03308 ArgK protein SUTH_03447 PF01642 Methylmalonyl-CoA mutase SUTH_03447 PF02310 B12 binding domain SUTH_03448 PF00392 Bacterial regulatory proteins, gntR family SUTH_03448 PF07729 FCD domain SUTH_03449 PF01738 Dienelactone hydrolase family SUTH_03450 PF02627 Carboxymuconolactone decarboxylase family SUTH_03451 PF04773 FecR protein SUTH_03453 PF05860 haemagglutination activity domain SUTH_03454 PF04773 FecR protein SUTH_03455 PF05860 haemagglutination activity domain SUTH_03456 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB SUTH_03456 PF08479 POTRA domain, ShlB-type SUTH_03458 PF03091 CutA1 divalent ion tolerance protein SUTH_03459 PF02683 SUTH_03459 SUTH_03459 PF11412 Disulphide bond corrector protein DsbC SUTH_03459 PF13899 Thioredoxin-like SUTH_03460 PF00677 Lumazine binding domain SUTH_03461 PF00925 GTP cyclohydrolase II SUTH_03461 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase SUTH_03462 PF00885 6,7-dimethyl-8-ribityllumazine synthase SUTH_03463 PF01029 NusB family SUTH_03464 PF00586 AIR synthase related protein, N-terminal domain SUTH_03465 PF04608 Phosphatidylglycerophosphatase A SUTH_03466 PF02464 Competence-damaged protein SUTH_03467 PF00154 recA bacterial DNA recombination protein SUTH_03468 PF02631 RecX family SUTH_03469 PF00005 ABC transporter SUTH_03469 PF12399 Branched-chain amino acid ATP-binding cassette transporter SUTH_03470 PF00309 SUTH_03470 SUTH_03470 PF04552 Sigma-54, DNA binding domain SUTH_03470 PF04963 Sigma-54 factor, core binding domain SUTH_03471 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein SUTH_03472 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 SUTH_03473 PF02603 HPr Serine kinase N terminus SUTH_03473 PF07475 HPr Serine kinase C-terminal domain SUTH_03476 PF03551 Transcriptional regulator PadR-like family SUTH_03476 PF10400 Virulence activator alpha C-term SUTH_03477 PF00724 NADH:flavin oxidoreductase / NADH oxidase family SUTH_03477 PF07992 Pyridine nucleotide-disulphide oxidoreductase SUTH_03478 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SUTH_03478 PF12727 PBP superfamily domain SUTH_03479 PF00528 Binding-protein-dependent transport system inner membrane component SUTH_03480 PF00005 ABC transporter SUTH_03481 PF12849 PBP superfamily domain SUTH_03482 PF00005 ABC transporter SUTH_03482 PF12848 ABC transporter SUTH_03484 PF01850 PIN domain SUTH_03485 PF01553 Acyltransferase SUTH_03486 PF00005 ABC transporter SUTH_03486 PF12848 ABC transporter SUTH_03487 PF03976 Polyphosphate kinase 2 (PPK2) SUTH_03488 PF04299 Putative FMN-binding domain SUTH_03489 PF02636 Putative S-adenosyl-L-methionine-dependent methyltransferase SUTH_03490 PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme SUTH_03492 PF00072 Response regulator receiver domain SUTH_03494 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SUTH_03494 PF03466 LysR substrate binding domain SUTH_03495 PF11142 SUTH_03495 SUTH_03496 PF03061 Thioesterase superfamily SUTH_03498 PF07690 Major Facilitator Superfamily SUTH_03499 PF01381 Helix-turn-helix SUTH_03500 PF00589 Phage integrase family SUTH_03500 PF13495 Phage integrase, N-terminal SAM-like domain SUTH_03501 PF08816 Inhibitor of vertebrate lysozyme (Ivy) SUTH_03503 PF05973 SUTH_03503 SUTH_03504 PF13560 Helix-turn-helix domain SUTH_03506 PF07045 Protein of unknown function (DUF1330) SUTH_03508 PF07021 Methionine biosynthesis protein MetW SUTH_03509 PF00561 alpha/beta hydrolase fold SUTH_03510 PF00391 PEP-utilising enzyme, mobile domain SUTH_03510 PF02896 PEP-utilising enzyme, TIM barrel domain SUTH_03510 PF05524 PEP-utilising enzyme, N-terminal SUTH_03511 PF00381 PTS HPr component phosphorylation site SUTH_03512 PF03610 PTS system fructose IIA component SUTH_03514 PF02424 ApbE family SUTH_03515 PF02951 Prokaryotic glutathione synthetase, N-terminal domain SUTH_03515 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain SUTH_03516 PF08886 Glutamate-cysteine ligase SUTH_03517 PF00005 ABC transporter SUTH_03517 PF03459 TOBE domain SUTH_03518 PF00528 Binding-protein-dependent transport system inner membrane component SUTH_03519 PF13531 Bacterial extracellular solute-binding protein SUTH_03520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SUTH_03521 PF07669 Eco57I restriction-modification methylase SUTH_03522 PF00266 Aminotransferase class-V SUTH_03523 PF11191 Protein of unknown function (DUF2782) SUTH_03524 PF03641 Possible lysine decarboxylase SUTH_03525 PF00476 DNA polymerase family A SUTH_03525 PF01367 5'-3' exonuclease, C-terminal SAM fold SUTH_03525 PF01612 3'-5' exonuclease SUTH_03525 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain SUTH_03526 PF00005 ABC transporter SUTH_03526 PF00664 ABC transporter transmembrane region SUTH_03527 PF13439 Glycosyltransferase Family 4 SUTH_03527 PF13692 Glycosyl transferases group 1 SUTH_03528 PF05050 Methyltransferase FkbM domain SUTH_03529 PF01075 Glycosyltransferase family 9 (heptosyltransferase) SUTH_03530 PF13439 Glycosyltransferase Family 4 SUTH_03530 PF13692 Glycosyl transferases group 1 SUTH_03531 PF00733 Asparagine synthase SUTH_03531 PF13537 Glutamine amidotransferase domain SUTH_03532 PF02475 Met-10+ like-protein SUTH_03533 PF13524 Glycosyl transferases group 1 SUTH_03534 PF00535 Glycosyl transferase family 2 SUTH_03535 PF02475 Met-10+ like-protein SUTH_03536 PF04932 SUTH_03536 SUTH_03537 PF00534 Glycosyl transferases group 1 SUTH_03538 PF13439 Glycosyltransferase Family 4 SUTH_03538 PF13692 Glycosyl transferases group 1 SUTH_03539 PF01075 Glycosyltransferase family 9 (heptosyltransferase) SUTH_03540 PF06005 Protein of unknown function (DUF904) SUTH_03541 PF05164 Cell division protein ZapA SUTH_03542 PF00563 EAL domain SUTH_03542 PF08668 HDOD domain SUTH_03543 PF01878 EVE domain SUTH_03544 PF01925 SUTH_03544 SUTH_03545 PF00043 Glutathione S-transferase, C-terminal domain SUTH_03545 PF02798 Glutathione S-transferase, N-terminal domain SUTH_03546 PF13472 GDSL-like Lipase/Acylhydrolase family SUTH_03547 PF11026 SUTH_03547 SUTH_03548 PF01553 Acyltransferase SUTH_03549 PF00501 AMP-binding enzyme SUTH_03549 PF13193 AMP-binding enzyme C-terminal domain SUTH_03550 PF06808 SUTH_03550 SUTH_03551 PF04290 SUTH_03551 SUTH_03552 PF03480 Bacterial extracellular solute-binding protein, family 7 SUTH_03553 PF05292 Malonyl-CoA decarboxylase (MCD) SUTH_03553 PF17408 SUTH_03553 SUTH_03554 PF00392 Bacterial regulatory proteins, gntR family SUTH_03554 PF07729 FCD domain SUTH_03555 PF13419 Haloacid dehalogenase-like hydrolase SUTH_03556 PF02635 DsrE/DsrF-like family SUTH_03557 PF02635 DsrE/DsrF-like family SUTH_03558 PF01266 FAD dependent oxidoreductase SUTH_03559 PF00378 Enoyl-CoA hydratase/isomerase family SUTH_03560 PF07690 Major Facilitator Superfamily SUTH_03561 PF00578 AhpC/TSA family SUTH_03562 PF00497 Bacterial extracellular solute-binding proteins, family 3 SUTH_03563 PF00563 EAL domain SUTH_03563 PF00672 HAMP domain SUTH_03563 PF00990 GGDEF domain SUTH_03563 PF13426 PAS domain SUTH_03563 PF17149 SUTH_03563 SUTH_03564 PF00581 Rhodanese-like domain SUTH_03565 PF00581 Rhodanese-like domain SUTH_03566 PF00809 Pterin binding enzyme SUTH_03566 PF02310 B12 binding domain SUTH_03566 PF02574 Homocysteine S-methyltransferase SUTH_03566 PF02607 B12 binding domain SUTH_03566 PF02965 Vitamin B12 dependent methionine synthase, activation domain SUTH_03569 PF08895 SUTH_03569 SUTH_03570 PF12697 Alpha/beta hydrolase family SUTH_03571 PF11146 SUTH_03571 SUTH_03572 PF01743 Poly A polymerase head domain SUTH_03572 PF01966 HD domain SUTH_03572 PF12627 Probable RNA and SrmB- binding site of polymerase A SUTH_03573 PF13460 NADH(P)-binding SUTH_03574 PF01464 Transglycosylase SLT domain SUTH_03575 PF01812 5-formyltetrahydrofolate cyclo-ligase family SUTH_03576 PF08668 HDOD domain SUTH_03577 PF00563 EAL domain SUTH_03577 PF00989 PAS fold SUTH_03577 PF00990 GGDEF domain SUTH_03577 PF13426 PAS domain SUTH_03578 PF00155 Aminotransferase class I and II SUTH_03579 PF01471 Putative peptidoglycan binding domain SUTH_03579 PF14326 SUTH_03579 SUTH_03586 PF00691 OmpA family SUTH_03589 PF13441 SUTH_03589 SUTH_03590 PF00400 WD domain, G-beta repeat SUTH_03590 PF00656 Caspase domain SUTH_03590 PF12894 Anaphase-promoting complex subunit 4 WD40 domain SUTH_03591 PF00691 OmpA family SUTH_03593 PF00656 Caspase domain SUTH_03595 PF03797 Autotransporter beta-domain SUTH_03597 PF00211 Adenylate and Guanylate cyclase catalytic domain SUTH_03597 PF05226 SUTH_03597 SUTH_03598 PF00291 Pyridoxal-phosphate dependent enzyme SUTH_03598 PF00585 C-terminal regulatory domain of Threonine dehydratase SUTH_03600 PF01554 MatE SUTH_03601 PF04536 TLP18 SUTH_03602 PF04536 TLP18 SUTH_03603 PF04011 LemA family SUTH_03604 PF01565 FAD binding domain SUTH_03604 PF02754 SUTH_03604 SUTH_03604 PF02913 FAD linked oxidases, C-terminal domain SUTH_03604 PF11880 SUTH_03604 SUTH_03604 PF12447 SUTH_03604 SUTH_03604 PF13183 4Fe-4S dicluster domain SUTH_03607 PF00512 His Kinase A (phospho-acceptor) domain SUTH_03607 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SUTH_03607 PF11808 SUTH_03607 SUTH_03607 PF13188 PAS domain SUTH_03608 PF00072 Response regulator receiver domain SUTH_03608 PF00486 Transcriptional regulatory protein, C terminal SUTH_03609 PF06155 Protein of unknown function (DUF971) SUTH_03610 PF01209 ubiE/COQ5 methyltransferase family SUTH_03611 PF04280 Tim44-like domain SUTH_03613 PF11845 SUTH_03613 SUTH_03615 PF02321 Outer membrane efflux protein SUTH_03616 PF00873 AcrB/AcrD/AcrF family SUTH_03617 PF16576 SUTH_03617 SUTH_03618 PF00440 Bacterial regulatory proteins, tetR family SUTH_03618 PF16859 SUTH_03618 SUTH_03619 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain SUTH_03619 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain SUTH_03620 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain SUTH_03620 PF02874 ATP synthase alpha/beta family, beta-barrel domain SUTH_03621 PF00231 ATP synthase SUTH_03622 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain SUTH_03622 PF00306 ATP synthase alpha/beta chain, C terminal domain SUTH_03622 PF02874 ATP synthase alpha/beta family, beta-barrel domain SUTH_03623 PF00213 ATP synthase delta (OSCP) subunit SUTH_03624 PF00430 ATP synthase B/B' CF(0) SUTH_03625 PF00137 ATP synthase subunit C SUTH_03626 PF00119 ATP synthase A chain SUTH_03627 PF03899 SUTH_03627 SUTH_03628 PF02195 ParB-like nuclease domain SUTH_03629 PF13614 AAA domain SUTH_03630 PF02527 rRNA small subunit methyltransferase G SUTH_03631 PF01134 Glucose inhibited division protein A SUTH_03631 PF13932 GidA associated domain 3 SUTH_03632 PF01925 SUTH_03632 SUTH_03633 PF01926 50S ribosome-binding GTPase SUTH_03633 PF10396 GTP-binding protein TrmE N-terminus SUTH_03633 PF12631 Catalytic cysteine-containing C-terminus of GTPase, MnmE SUTH_03634 PF02096 60Kd inner membrane protein SUTH_03634 PF14849 YidC periplasmic domain SUTH_03635 PF01809 SUTH_03635 SUTH_03636 PF00825 Ribonuclease P SUTH_03637 PF00468 Ribosomal protein L34