locus-tag class description Sdel_0001 PF02511 Thymidylate synthase complementing protein Sdel_0002 PF02075 Crossover junction endodeoxyribonuclease RuvC Sdel_0003 PF11638 DnaA N-terminal domain Sdel_0003 PF08299 Bacterial dnaA protein helix-turn-helix Sdel_0003 PF00308 Bacterial dnaA protein Sdel_0004 PF02767 DNA polymerase III beta subunit, central domain Sdel_0004 PF00712 DNA polymerase III beta subunit, N-terminal domain Sdel_0004 PF02768 DNA polymerase III beta subunit, C-terminal domain Sdel_0005 PF01751 Toprim domain Sdel_0005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Sdel_0005 PF00986 DNA gyrase B subunit, carboxyl terminus Sdel_0005 PF00204 DNA gyrase B Sdel_0006 PF00990 Diguanylate cyclase, GGDEF domain Sdel_0006 PF00563 EAL domain Sdel_0006 PF08448 PAS fold Sdel_0006 PF08447 PAS fold Sdel_0007 PF14489 QueF-like protein Sdel_0009 PF03167 Uracil DNA glycosylase superfamily Sdel_0010 PF14815 NUDIX domain Sdel_0010 PF00730 HhH-GPD superfamily base excision DNA repair protein Sdel_0010 PF00633 Helix-hairpin-helix motif Sdel_0012 PF07690 Major Facilitator Superfamily Sdel_0016 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Sdel_0016 PF02743 Cache domain Sdel_0016 PF00672 HAMP domain Sdel_0018 PF06826 Predicted Permease Membrane Region Sdel_0018 PF02080 TrkA-C domain Sdel_0020 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Sdel_0021 PF00528 Binding-protein-dependent transport system inner membrane component Sdel_0022 PF12911 N-terminal TM domain of oligopeptide transport permease C Sdel_0022 PF00528 Binding-protein-dependent transport system inner membrane component Sdel_0023 PF00005 ABC transporter Sdel_0024 PF00005 ABC transporter Sdel_0025 PF01554 MatE Sdel_0028 PF00266 Aminotransferase class-V Sdel_0030 PF03473 MOSC domain Sdel_0030 PF03475 3-alpha domain Sdel_0032 PF02463 RecF/RecN/SMC N terminal domain Sdel_0033 PF01875 Memo-like protein Sdel_0036 PF00892 EamA-like transporter family Sdel_0039 PF04879 Molybdopterin oxidoreductase Fe4S4 domain Sdel_0039 PF01568 Molydopterin dinucleotide binding domain Sdel_0039 PF00384 Molybdopterin oxidoreductase Sdel_0041 PF00920 Dehydratase family Sdel_0042 PF01914 MarC family integral membrane protein Sdel_0044 PF00483 Nucleotidyl transferase Sdel_0045 PF00117 Glutamine amidotransferase class-I Sdel_0045 PF06418 CTP synthase N-terminus Sdel_0046 PF01368 DHH family Sdel_0046 PF17768 RecJ OB domain Sdel_0046 PF02272 DHHA1 domain Sdel_0048 PF00795 Carbon-nitrogen hydrolase Sdel_0049 PF00268 Ribonucleotide reductase, small chain Sdel_0053 PF01177 Asp/Glu/Hydantoin racemase Sdel_0054 PF03477 ATP cone domain Sdel_0054 PF02867 Ribonucleotide reductase, barrel domain Sdel_0054 PF00317 Ribonucleotide reductase, all-alpha domain Sdel_0055 PF00206 Lyase Sdel_0055 PF10397 Adenylosuccinate lyase C-terminus Sdel_0056 PF01479 S4 domain Sdel_0056 PF00849 RNA pseudouridylate synthase Sdel_0057 PF01557 Fumarylacetoacetate (FAA) hydrolase family Sdel_0059 PF04055 Radical SAM superfamily Sdel_0061 PF00977 Histidine biosynthesis protein Sdel_0062 PF00398 Ribosomal RNA adenine dimethylase Sdel_0063 PF17770 Ribonuclease J C-terminal domain Sdel_0063 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain Sdel_0063 PF00753 Metallo-beta-lactamase superfamily Sdel_0064 PF01380 SIS domain Sdel_0064 PF00571 CBS domain Sdel_0065 PF00849 RNA pseudouridylate synthase Sdel_0065 PF01479 S4 domain Sdel_0066 PF05496 Holliday junction DNA helicase RuvB P-loop domain Sdel_0066 PF16193 AAA C-terminal domain Sdel_0066 PF01661 Macro domain Sdel_0066 PF12002 MgsA AAA+ ATPase C terminal Sdel_0068 PF01312 FlhB HrpN YscU SpaS Family Sdel_0070 PF02769 AIR synthase related protein, C-terminal domain Sdel_0070 PF00586 AIR synthase related protein, N-terminal domain Sdel_0071 PF01121 Dephospho-CoA kinase Sdel_0072 PF01678 Diaminopimelate epimerase Sdel_0074 PF03462 PCRF domain Sdel_0074 PF00472 RF-1 domain Sdel_0075 PF01649 Ribosomal protein S20 Sdel_0078 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II Sdel_0078 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain Sdel_0078 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III Sdel_0078 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I Sdel_0079 PF01252 Signal peptidase (SPase) II Sdel_0080 PF00884 Sulfatase Sdel_0081 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain Sdel_0081 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) Sdel_0081 PF03129 Anticodon binding domain Sdel_0082 PF05198 Translation initiation factor IF-3, N-terminal domain Sdel_0082 PF00707 Translation initiation factor IF-3, C-terminal domain Sdel_0083 PF01632 Ribosomal protein L35 Sdel_0084 PF00453 Ribosomal protein L20 Sdel_0085 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase Sdel_0085 PF12801 4Fe-4S binding domain Sdel_0085 PF13746 4Fe-4S dicluster domain Sdel_0087 PF01165 Ribosomal protein S21 Sdel_0090 PF03738 Glutathionylspermidine synthase preATP-grasp Sdel_0091 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Sdel_0091 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Sdel_0092 PF04461 Protein of unknown function (DUF520) Sdel_0094 PF01219 Prokaryotic diacylglycerol kinase Sdel_0096 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Sdel_0096 PF00512 His Kinase A (phospho-acceptor) domain Sdel_0096 PF00672 HAMP domain Sdel_0096 PF13426 PAS domain Sdel_0097 PF00072 Response regulator receiver domain Sdel_0097 PF00486 Transcriptional regulatory protein, C terminal Sdel_0101 PF00005 ABC transporter Sdel_0102 PF02405 Permease MlaE Sdel_0103 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 Sdel_0103 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) Sdel_0104 PF00543 Nitrogen regulatory protein P-II Sdel_0105 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD Sdel_0106 PF00072 Response regulator receiver domain Sdel_0106 PF08769 Sporulation initiation factor Spo0A C terminal Sdel_0107 PF00512 His Kinase A (phospho-acceptor) domain Sdel_0107 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Sdel_0112 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Sdel_0112 PF17200 Single Cache domain 2 Sdel_0112 PF00672 HAMP domain Sdel_0113 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Sdel_0113 PF17200 Single Cache domain 2 Sdel_0113 PF00672 HAMP domain Sdel_0114 PF08543 Phosphomethylpyrimidine kinase Sdel_0117 PF00033 Cytochrome b/b6/petB Sdel_0117 PF00032 Cytochrome b(C-terminal)/b6/petD Sdel_0118 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal Sdel_0118 PF00355 Rieske [2Fe-2S] domain Sdel_0119 PF00248 Aldo/keto reductase family Sdel_0120 PF00072 Response regulator receiver domain Sdel_0120 PF00486 Transcriptional regulatory protein, C terminal Sdel_0123 PF00528 Binding-protein-dependent transport system inner membrane component Sdel_0124 PF00497 Bacterial extracellular solute-binding proteins, family 3 Sdel_0125 PF00005 ABC transporter Sdel_0129 PF00950 ABC 3 transport family Sdel_0130 PF00005 ABC transporter Sdel_0134 PF01261 Xylose isomerase-like TIM barrel Sdel_0136 PF00501 AMP-binding enzyme Sdel_0136 PF13193 AMP-binding enzyme C-terminal domain Sdel_0138 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 Sdel_0139 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit Sdel_0140 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit Sdel_0141 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit Sdel_0144 PF13237 4Fe-4S dicluster domain Sdel_0144 PF04879 Molybdopterin oxidoreductase Fe4S4 domain Sdel_0144 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region Sdel_0144 PF01568 Molydopterin dinucleotide binding domain Sdel_0144 PF00384 Molybdopterin oxidoreductase Sdel_0145 PF00146 NADH dehydrogenase Sdel_0146 PF12838 4Fe-4S dicluster domain Sdel_0147 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 Sdel_0148 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L Sdel_0149 PF00361 Proton-conducting membrane transporter Sdel_0149 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus Sdel_0150 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus Sdel_0150 PF00361 Proton-conducting membrane transporter Sdel_0151 PF00361 Proton-conducting membrane transporter Sdel_0157 PF16591 Helical bimodular sensor domain Sdel_0157 PF00672 HAMP domain Sdel_0157 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Sdel_0159 PF04055 Radical SAM superfamily Sdel_0159 PF06463 Molybdenum Cofactor Synthesis C Sdel_0160 PF00994 Probable molybdopterin binding domain Sdel_0160 PF03453 MoeA N-terminal region (domain I and II) Sdel_0160 PF03454 MoeA C-terminal region (domain IV) Sdel_0162 PF04452 RNA methyltransferase Sdel_0163 PF01197 Ribosomal protein L31 Sdel_0164 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Sdel_0165 PF08032 RNA 2'-O ribose methyltransferase substrate binding Sdel_0165 PF00588 SpoU rRNA Methylase family Sdel_0168 PF00155 Aminotransferase class I and II Sdel_0169 PF00742 Homoserine dehydrogenase Sdel_0169 PF03447 Homoserine dehydrogenase, NAD binding domain Sdel_0169 PF01842 ACT domain Sdel_0170 PF02021 Uncharacterised protein family UPF0102 Sdel_0171 PF00085 Thioredoxin Sdel_0172 PF07992 Pyridine nucleotide-disulphide oxidoreductase Sdel_0173 PF05173 Dihydrodipicolinate reductase, C-terminus Sdel_0173 PF01113 Dihydrodipicolinate reductase, N-terminus Sdel_0174 PF00156 Phosphoribosyl transferase domain Sdel_0175 PF16199 Radical_SAM C-terminal domain Sdel_0175 PF04055 Radical SAM superfamily Sdel_0178 PF01502 Phosphoribosyl-AMP cyclohydrolase Sdel_0178 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase Sdel_0180 PF01063 Amino-transferase class IV Sdel_0181 PF00578 AhpC/TSA family Sdel_0183 PF02677 Epoxyqueuosine reductase QueH Sdel_0184 PF07977 FabA-like domain Sdel_0185 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 Sdel_0185 PF00132 Bacterial transferase hexapeptide (six repeats) Sdel_0186 PF07724 AAA domain (Cdc48 subfamily) Sdel_0186 PF10431 C-terminal, D2-small domain, of ClpB protein Sdel_0186 PF06689 ClpX C4-type zinc finger Sdel_0189 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain Sdel_0189 PF02142 MGS-like domain Sdel_0189 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain Sdel_0195 PF01883 Iron-sulfur cluster assembly protein Sdel_0195 PF10609 NUBPL iron-transfer P-loop NTPase Sdel_0197 PF02001 Protein of unknown function DUF134 Sdel_0198 PF00899 ThiF family Sdel_0199 PF01975 Survival protein SurE Sdel_0200 PF02684 Lipid-A-disaccharide synthetase Sdel_0201 PF01272 Transcription elongation factor, GreA/GreB, C-term Sdel_0201 PF03449 Transcription elongation factor, N-terminal Sdel_0202 PF02774 Semialdehyde dehydrogenase, dimerisation domain Sdel_0202 PF01118 Semialdehyde dehydrogenase, NAD binding domain Sdel_0203 PF12850 Calcineurin-like phosphoesterase superfamily domain Sdel_0204 PF00072 Response regulator receiver domain Sdel_0204 PF01584 CheW-like domain Sdel_0205 PF07194 P2 response regulator binding domain Sdel_0205 PF01627 Hpt domain Sdel_0205 PF01584 CheW-like domain Sdel_0205 PF02895 Signal transducing histidine kinase, homodimeric domain Sdel_0205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Sdel_0206 PF01584 CheW-like domain Sdel_0209 PF00923 Transaldolase/Fructose-6-phosphate aldolase Sdel_0210 PF00437 Type II/IV secretion system protein Sdel_0211 PF01386 Ribosomal L25p family Sdel_0211 PF14693 Ribosomal protein TL5, C-terminal domain Sdel_0212 PF01195 Peptidyl-tRNA hydrolase Sdel_0214 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain Sdel_0214 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain Sdel_0216 PF01817 Chorismate mutase type II Sdel_0216 PF01842 ACT domain Sdel_0216 PF00800 Prephenate dehydratase Sdel_0217 PF00155 Aminotransferase class I and II Sdel_0218 PF01514 Secretory protein of YscJ/FliF family Sdel_0218 PF08345 Flagellar M-ring protein C-terminal Sdel_0219 PF01706 FliG C-terminal domain Sdel_0219 PF14841 FliG middle domain Sdel_0219 PF14842 FliG N-terminal domain Sdel_0221 PF02779 Transketolase, pyrimidine binding domain Sdel_0221 PF02780 Transketolase, C-terminal domain Sdel_0221 PF13292 1-deoxy-D-xylulose-5-phosphate synthase Sdel_0223 PF00578 AhpC/TSA family Sdel_0223 PF10417 C-terminal domain of 1-Cys peroxiredoxin Sdel_0224 PF00037 4Fe-4S binding domain Sdel_0225 PF00334 Nucleoside diphosphate kinase Sdel_0227 PF01783 Ribosomal L32p protein family Sdel_0228 PF02504 Fatty acid synthesis protein Sdel_0229 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III Sdel_0229 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal Sdel_0230 PF02153 Prephenate dehydrogenase Sdel_0231 PF01103 Surface antigen Sdel_0231 PF07244 Surface antigen variable number repeat Sdel_0233 PF00037 4Fe-4S binding domain Sdel_0234 PF00512 His Kinase A (phospho-acceptor) domain Sdel_0234 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Sdel_0235 PF00072 Response regulator receiver domain Sdel_0235 PF00486 Transcriptional regulatory protein, C terminal Sdel_0237 PF02660 Glycerol-3-phosphate acyltransferase Sdel_0238 PF02445 Quinolinate synthetase A protein Sdel_0239 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain Sdel_0239 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain Sdel_0240 PF01312 FlhB HrpN YscU SpaS Family Sdel_0242 PF01476 LysM domain Sdel_0242 PF01551 Peptidase family M23 Sdel_0243 PF03775 Septum formation inhibitor MinC, C-terminal domain Sdel_0244 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase Sdel_0246 PF08544 GHMP kinases C terminal Sdel_0246 PF00288 GHMP kinases N terminal domain Sdel_0248 PF00009 Elongation factor Tu GTP binding domain Sdel_0248 PF11987 Translation-initiation factor 2 Sdel_0248 PF04760 Translation initiation factor IF-2, N-terminal region Sdel_0249 PF02033 Ribosome-binding factor A Sdel_0250 PF02576 RimP N-terminal domain Sdel_0250 PF17384 RimP C-terminal SH3 domain Sdel_0251 PF01872 RibD C-terminal domain Sdel_0251 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region Sdel_0254 PF00563 EAL domain Sdel_0254 PF08448 PAS fold Sdel_0254 PF00990 Diguanylate cyclase, GGDEF domain Sdel_0254 PF08447 PAS fold Sdel_0255 PF00313 'Cold-shock' DNA-binding domain Sdel_0256 PF00512 His Kinase A (phospho-acceptor) domain Sdel_0256 PF13426 PAS domain Sdel_0256 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Sdel_0256 PF00672 HAMP domain Sdel_0257 PF00072 Response regulator receiver domain Sdel_0257 PF00486 Transcriptional regulatory protein, C terminal Sdel_0259 PF13442 Cytochrome C oxidase, cbb3-type, subunit III Sdel_0261 PF16199 Radical_SAM C-terminal domain Sdel_0261 PF04055 Radical SAM superfamily Sdel_0262 PF00672 HAMP domain Sdel_0262 PF16591 Helical bimodular sensor domain Sdel_0262 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Sdel_0263 PF01075 Glycosyltransferase family 9 (heptosyltransferase) Sdel_0264 PF00132 Bacterial transferase hexapeptide (six repeats) Sdel_0264 PF12464 Maltose acetyltransferase Sdel_0265 PF04879 Molybdopterin oxidoreductase Fe4S4 domain Sdel_0265 PF01568 Molydopterin dinucleotide binding domain Sdel_0265 PF00384 Molybdopterin oxidoreductase Sdel_0265 PF10518 TAT (twin-arginine translocation) pathway signal sequence Sdel_0266 PF13247 4Fe-4S dicluster domain Sdel_0267 PF03916 Polysulphide reductase, NrfD Sdel_0268 PF00990 Diguanylate cyclase, GGDEF domain Sdel_0268 PF00563 EAL domain Sdel_0268 PF08448 PAS fold Sdel_0269 PF01568 Molydopterin dinucleotide binding domain Sdel_0269 PF04879 Molybdopterin oxidoreductase Fe4S4 domain Sdel_0269 PF00384 Molybdopterin oxidoreductase Sdel_0270 PF13247 4Fe-4S dicluster domain Sdel_0271 PF03916 Polysulphide reductase, NrfD Sdel_0272 PF00072 Response regulator receiver domain Sdel_0272 PF00486 Transcriptional regulatory protein, C terminal Sdel_0273 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Sdel_0273 PF00512 His Kinase A (phospho-acceptor) domain Sdel_0273 PF13426 PAS domain Sdel_0273 PF00672 HAMP domain Sdel_0275 PF06969 HemN C-terminal domain Sdel_0275 PF04055 Radical SAM superfamily Sdel_0276 PF12823 Domain of unknown function (DUF3817) Sdel_0278 PF02833 DHHA2 domain Sdel_0278 PF01368 DHH family Sdel_0280 PF01209 ubiE/COQ5 methyltransferase family Sdel_0281 PF13742 OB-fold nucleic acid binding domain Sdel_0281 PF02601 Exonuclease VII, large subunit Sdel_0282 PF00962 Adenosine/AMP deaminase Sdel_0283 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase Sdel_0284 PF03466 LysR substrate binding domain Sdel_0284 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Sdel_0285 PF03601 Conserved hypothetical protein 698 Sdel_0287 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) Sdel_0287 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 Sdel_0288 PF01343 Peptidase family S49 Sdel_0289 PF01979 Amidohydrolase family Sdel_0290 PF01220 Dehydroquinase class II Sdel_0291 PF00557 Metallopeptidase family M24 Sdel_0291 PF01321 Creatinase/Prolidase N-terminal domain Sdel_0292 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) Sdel_0293 PF00448 SRP54-type protein, GTPase domain Sdel_0294 PF10609 NUBPL iron-transfer P-loop NTPase Sdel_0296 PF04545 Sigma-70, region 4 Sdel_0296 PF04539 Sigma-70 region 3 Sdel_0296 PF04542 Sigma-70 region 2 Sdel_0297 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term Sdel_0297 PF02154 Flagellar motor switch protein FliM Sdel_0298 PF04509 CheC-like family Sdel_0298 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term Sdel_0299 PF03641 Possible lysine decarboxylase Sdel_0301 PF00535 Glycosyl transferase family 2 Sdel_0302 PF08889 WbqC-like protein family Sdel_0303 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family Sdel_0307 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase Sdel_0307 PF14572 Phosphoribosyl synthetase-associated domain Sdel_0308 PF06421 GTP-binding protein LepA C-terminus Sdel_0308 PF03144 Elongation factor Tu domain 2 Sdel_0308 PF00679 Elongation factor G C-terminus Sdel_0308 PF00009 Elongation factor Tu GTP binding domain Sdel_0309 PF00156 Phosphoribosyl transferase domain Sdel_0311 PF00083 Sugar (and other) transporter Sdel_0312 PF00171 Aldehyde dehydrogenase family Sdel_0314 PF16868 NMT1-like family Sdel_0316 PF04055 Radical SAM superfamily Sdel_0317 PF01208 Uroporphyrinogen decarboxylase (URO-D) Sdel_0319 PF02774 Semialdehyde dehydrogenase, dimerisation domain Sdel_0319 PF01118 Semialdehyde dehydrogenase, NAD binding domain Sdel_0320 PF02954 Bacterial regulatory protein, Fis family Sdel_0320 PF00072 Response regulator receiver domain Sdel_0320 PF00158 Sigma-54 interaction domain Sdel_0323 PF00521 DNA gyrase/topoisomerase IV, subunit A Sdel_0323 PF03989 DNA gyrase C-terminal domain, beta-propeller Sdel_0326 PF01979 Amidohydrolase family Sdel_0327 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain Sdel_0327 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain Sdel_0330 PF00990 Diguanylate cyclase, GGDEF domain Sdel_0330 PF10442 FIST C domain Sdel_0330 PF08495 FIST N domain Sdel_0330 PF00563 EAL domain Sdel_0335 PF00085 Thioredoxin Sdel_0337 PF07286 Protein of unknown function (DUF1445) Sdel_0341 PF09905 DNA-binding protein VF530 Sdel_0342 PF00106 short chain dehydrogenase Sdel_0344 PF03883 Peroxide stress protein YaaA Sdel_0345 PF00009 Elongation factor Tu GTP binding domain Sdel_0345 PF03143 Elongation factor Tu C-terminal domain Sdel_0345 PF03144 Elongation factor Tu domain 2 Sdel_0346 PF00471 Ribosomal protein L33 Sdel_0348 PF02357 Transcription termination factor nusG Sdel_0349 PF00298 Ribosomal protein L11, RNA binding domain Sdel_0349 PF03946 Ribosomal protein L11, N-terminal domain Sdel_0350 PF00687 Ribosomal protein L1p/L10e family Sdel_0351 PF00466 Ribosomal protein L10 Sdel_0352 PF00542 Ribosomal protein L7/L12 C-terminal domain Sdel_0352 PF16320 Ribosomal protein L7/L12 dimerisation domain Sdel_0353 PF04560 RNA polymerase Rpb2, domain 7 Sdel_0353 PF00562 RNA polymerase Rpb2, domain 6 Sdel_0353 PF10385 RNA polymerase beta subunit external 1 domain Sdel_0353 PF04561 RNA polymerase Rpb2, domain 2 Sdel_0353 PF04563 RNA polymerase beta subunit Sdel_0353 PF04565 RNA polymerase Rpb2, domain 3 Sdel_0354 PF04998 RNA polymerase Rpb1, domain 5 Sdel_0354 PF04997 RNA polymerase Rpb1, domain 1 Sdel_0354 PF00623 RNA polymerase Rpb1, domain 2 Sdel_0354 PF04983 RNA polymerase Rpb1, domain 3 Sdel_0354 PF05000 RNA polymerase Rpb1, domain 4 Sdel_0355 PF00164 Ribosomal protein S12/S23 Sdel_0356 PF00177 Ribosomal protein S7p/S5e Sdel_0357 PF00009 Elongation factor Tu GTP binding domain Sdel_0357 PF14492 Elongation Factor G, domain II Sdel_0357 PF03144 Elongation factor Tu domain 2 Sdel_0357 PF03764 Elongation factor G, domain IV Sdel_0357 PF00679 Elongation factor G C-terminus Sdel_0358 PF09383 NIL domain Sdel_0358 PF00005 ABC transporter Sdel_0359 PF00528 Binding-protein-dependent transport system inner membrane component Sdel_0360 PF03180 NLPA lipoprotein Sdel_0361 PF18364 Molybdopterin oxidoreductase N-terminal domain Sdel_0361 PF01568 Molydopterin dinucleotide binding domain Sdel_0361 PF00384 Molybdopterin oxidoreductase Sdel_0363 PF00072 Response regulator receiver domain Sdel_0363 PF00486 Transcriptional regulatory protein, C terminal Sdel_0364 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Sdel_0365 PF00072 Response regulator receiver domain Sdel_0365 PF08448 PAS fold Sdel_0365 PF13188 PAS domain Sdel_0365 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Sdel_0365 PF00512 His Kinase A (phospho-acceptor) domain Sdel_0367 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Sdel_0367 PF16591 Helical bimodular sensor domain Sdel_0367 PF00672 HAMP domain Sdel_0368 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Sdel_0368 PF08447 PAS fold Sdel_0372 PF01168 Alanine racemase, N-terminal domain Sdel_0372 PF00842 Alanine racemase, C-terminal domain Sdel_0376 PF02527 rRNA small subunit methyltransferase G Sdel_0377 PF12729 Four helix bundle sensory module for signal transduction Sdel_0377 PF00672 HAMP domain Sdel_0377 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Sdel_0378 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain Sdel_0378 PF02777 Iron/manganese superoxide dismutases, C-terminal domain Sdel_0379 PF01741 Large-conductance mechanosensitive channel, MscL Sdel_0380 PF00925 GTP cyclohydrolase II Sdel_0381 PF00490 Delta-aminolevulinic acid dehydratase Sdel_0382 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain Sdel_0382 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain Sdel_0383 PF10788 Protein of unknown function (DUF2603) Sdel_0384 PF04055 Radical SAM superfamily Sdel_0384 PF06969 HemN C-terminal domain Sdel_0385 PF02754 Cysteine-rich domain Sdel_0388 PF07690 Major Facilitator Superfamily Sdel_0389 PF02810 SEC-C motif Sdel_0390 PF00027 Cyclic nucleotide-binding domain Sdel_0390 PF13545 Crp-like helix-turn-helix domain Sdel_0392 PF00990 Diguanylate cyclase, GGDEF domain Sdel_0392 PF08448 PAS fold Sdel_0393 PF01790 Prolipoprotein diacylglyceryl transferase Sdel_0394 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit Sdel_0395 PF02910 Fumarate reductase flavoprotein C-term Sdel_0395 PF00890 FAD binding domain Sdel_0396 PF13183 4Fe-4S dicluster domain Sdel_0396 PF13085 2Fe-2S iron-sulfur cluster binding domain Sdel_0397 PF00350 Dynamin family Sdel_0398 PF00350 Dynamin family Sdel_0399 PF01594 AI-2E family transporter Sdel_0400 PF17864 RuvB AAA lid domain Sdel_0400 PF05491 RuvB C-terminal winged helix domain Sdel_0400 PF05496 Holliday junction DNA helicase RuvB P-loop domain Sdel_0401 PF02548 Ketopantoate hydroxymethyltransferase Sdel_0403 PF00290 Tryptophan synthase alpha chain Sdel_0405 PF04333 MlaA lipoprotein Sdel_0406 PF00318 Ribosomal protein S2 Sdel_0407 PF00889 Elongation factor TS Sdel_0408 PF00005 ABC transporter Sdel_0409 PF01311 Bacterial export proteins, family 1 Sdel_0411 PF00625 Guanylate kinase Sdel_0412 PF02416 mttA/Hcf106 family Sdel_0413 PF05746 DALR anticodon binding domain Sdel_0413 PF03485 Arginyl tRNA synthetase N terminal domain Sdel_0413 PF00750 tRNA synthetases class I (R) Sdel_0415 PF00990 Diguanylate cyclase, GGDEF domain Sdel_0415 PF00072 Response regulator receiver domain Sdel_0419 PF00034 Cytochrome c Sdel_0419 PF03150 Di-haem cytochrome c peroxidase Sdel_0420 PF01467 Cytidylyltransferase-like Sdel_0421 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain Sdel_0421 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain Sdel_0422 PF00162 Phosphoglycerate kinase Sdel_0423 PF00121 Triosephosphate isomerase Sdel_0425 PF00528 Binding-protein-dependent transport system inner membrane component Sdel_0427 PF13184 NusA-like KH domain Sdel_0427 PF08529 NusA N-terminal domain Sdel_0429 PF04055 Radical SAM superfamily Sdel_0429 PF00919 Uncharacterized protein family UPF0004 Sdel_0434 PF01171 PP-loop family Sdel_0435 PF00919 Uncharacterized protein family UPF0004 Sdel_0435 PF04055 Radical SAM superfamily Sdel_0436 PF02569 Pantoate-beta-alanine ligase Sdel_0437 PF00472 RF-1 domain Sdel_0437 PF03462 PCRF domain Sdel_0442 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding Sdel_0442 PF12169 DNA polymerase III subunits gamma and tau domain III Sdel_0442 PF12170 DNA polymerase III tau subunit V interacting with alpha Sdel_0443 PF07497 Rho termination factor, RNA-binding domain Sdel_0443 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Sdel_0443 PF07498 Rho termination factor, N-terminal domain Sdel_0444 PF01255 Putative undecaprenyl diphosphate synthase Sdel_0445 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component Sdel_0446 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component Sdel_0447 PF03480 Bacterial extracellular solute-binding protein, family 7 Sdel_0448 PF12833 Helix-turn-helix domain Sdel_0448 PF00072 Response regulator receiver domain Sdel_0449 PF08447 PAS fold Sdel_0449 PF00989 PAS fold Sdel_0449 PF00512 His Kinase A (phospho-acceptor) domain Sdel_0449 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Sdel_0451 PF00589 Phage integrase family Sdel_0451 PF13356 Arm DNA-binding domain Sdel_0460 PF13784 Fic/DOC family N-terminal Sdel_0460 PF02661 Fic/DOC family Sdel_0463 PF18381 YcaO cyclodehydratase C-terminal domain Sdel_0463 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding Sdel_0464 PF02447 GntP family permease Sdel_0465 PF00271 Helicase conserved C-terminal domain Sdel_0465 PF00270 DEAD/DEAH box helicase Sdel_0467 PF00563 EAL domain Sdel_0467 PF12792 CSS motif domain associated with EAL Sdel_0468 PF03063 Prismane/CO dehydrogenase family Sdel_0476 PF02653 Branched-chain amino acid transport system / permease component Sdel_0477 PF11862 Domain of unknown function (DUF3382) Sdel_0477 PF02653 Branched-chain amino acid transport system / permease component Sdel_0478 PF00005 ABC transporter Sdel_0478 PF12399 Branched-chain amino acid ATP-binding cassette transporter Sdel_0479 PF00005 ABC transporter Sdel_0480 PF01578 Cytochrome C assembly protein Sdel_0480 PF05140 ResB-like family Sdel_0482 PF00994 Probable molybdopterin binding domain Sdel_0482 PF02464 Competence-damaged protein Sdel_0482 PF18146 Damage-inducible protein CinA KH domain Sdel_0483 PF08264 Anticodon-binding domain of tRNA Sdel_0483 PF00133 tRNA synthetases class I (I, L, M and V) Sdel_0485 PF01425 Amidase Sdel_0486 PF00478 IMP dehydrogenase / GMP reductase domain Sdel_0486 PF00571 CBS domain Sdel_0487 PF00561 alpha/beta hydrolase fold Sdel_0488 PF02609 Exonuclease VII small subunit Sdel_0490 PF00899 ThiF family Sdel_0491 PF00155 Aminotransferase class I and II Sdel_0492 PF01225 Mur ligase family, catalytic domain Sdel_0492 PF08245 Mur ligase middle domain Sdel_0492 PF02875 Mur ligase family, glutamate ligase domain Sdel_0494 PF00488 MutS domain V Sdel_0494 PF01713 Smr domain Sdel_0495 PF07687 Peptidase dimerisation domain Sdel_0495 PF01546 Peptidase family M20/M25/M40 Sdel_0496 PF01042 Endoribonuclease L-PSP Sdel_0497 PF06039 Malate:quinone oxidoreductase (Mqo) Sdel_0501 PF00391 PEP-utilising enzyme, mobile domain Sdel_0501 PF00224 Pyruvate kinase, barrel domain Sdel_0501 PF02887 Pyruvate kinase, alpha/beta domain Sdel_0502 PF00829 Ribosomal prokaryotic L21 protein Sdel_0503 PF01016 Ribosomal L27 protein Sdel_0504 PF01018 GTP1/OBG Sdel_0504 PF01926 50S ribosome-binding GTPase Sdel_0505 PF00696 Amino acid kinase family Sdel_0506 PF00551 Formyl transferase Sdel_0506 PF02911 Formyl transferase, C-terminal domain Sdel_0508 PF13614 AAA domain Sdel_0509 PF17762 HTH domain found in ParB protein Sdel_0509 PF02195 ParB-like nuclease domain Sdel_0511 PF00430 ATP synthase B/B' CF(0) Sdel_0512 PF00213 ATP synthase delta (OSCP) subunit Sdel_0513 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Sdel_0513 PF00306 ATP synthase alpha/beta chain, C terminal domain Sdel_0513 PF02874 ATP synthase alpha/beta family, beta-barrel domain Sdel_0514 PF00231 ATP synthase Sdel_0515 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Sdel_0515 PF02874 ATP synthase alpha/beta family, beta-barrel domain Sdel_0516 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain Sdel_0517 PF01618 MotA/TolQ/ExbB proton channel family Sdel_0518 PF02472 Biopolymer transport protein ExbD/TolR Sdel_0520 PF04052 TolB amino-terminal domain Sdel_0521 PF01389 OmpA-like transmembrane domain Sdel_0521 PF00691 OmpA family Sdel_0523 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase Sdel_0524 PF06505 Activator of aromatic catabolism Sdel_0524 PF02830 V4R domain Sdel_0524 PF00158 Sigma-54 interaction domain Sdel_0524 PF02954 Bacterial regulatory protein, Fis family Sdel_0525 PF00698 Acyl transferase domain Sdel_0526 PF01048 Phosphorylase superfamily Sdel_0527 PF01171 PP-loop family Sdel_0529 PF01645 Conserved region in glutamate synthase Sdel_0529 PF04898 Glutamate synthase central domain Sdel_0529 PF00310 Glutamine amidotransferases class-II Sdel_0529 PF01493 GXGXG motif Sdel_0530 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Sdel_0530 PF07992 Pyridine nucleotide-disulphide oxidoreductase Sdel_0532 PF17848 Acetyl-coA carboxylase zinc finger domain Sdel_0532 PF01039 Carboxyl transferase domain Sdel_0533 PF02590 Predicted SPOUT methyltransferase Sdel_0534 PF01258 Prokaryotic dksA/traR C4-type zinc finger Sdel_0536 PF01207 Dihydrouridine synthase (Dus) Sdel_0540 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term Sdel_0541 PF03372 Endonuclease/Exonuclease/phosphatase family Sdel_0544 PF01047 MarR family Sdel_0550 PF13667 ThiC-associated domain Sdel_0550 PF01964 Radical SAM ThiC family Sdel_0552 PF00324 Amino acid permease Sdel_0553 PF01925 Sulfite exporter TauE/SafE Sdel_0554 PF17760 UvrA interaction domain Sdel_0554 PF17755 UvrA DNA-binding domain Sdel_0554 PF00005 ABC transporter Sdel_0555 PF00375 Sodium:dicarboxylate symporter family Sdel_0556 PF00375 Sodium:dicarboxylate symporter family Sdel_0558 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain Sdel_0558 PF00476 DNA polymerase family A Sdel_0558 PF01367 5'-3' exonuclease, C-terminal SAM fold Sdel_0559 PF02659 Putative manganese efflux pump Sdel_0562 PF00684 DnaJ central domain Sdel_0562 PF00226 DnaJ domain Sdel_0562 PF01556 DnaJ C terminal domain Sdel_0564 PF00072 Response regulator receiver domain Sdel_0564 PF00486 Transcriptional regulatory protein, C terminal Sdel_0565 PF16750 Sensor domain of 2-component histidine kinase Sdel_0565 PF00512 His Kinase A (phospho-acceptor) domain Sdel_0565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Sdel_0565 PF00672 HAMP domain Sdel_0566 PF02132 RecR protein Sdel_0566 PF13662 Toprim domain Sdel_0567 PF00465 Iron-containing alcohol dehydrogenase Sdel_0568 PF03707 Bacterial signalling protein N terminal repeat Sdel_0568 PF00563 EAL domain Sdel_0568 PF00990 Diguanylate cyclase, GGDEF domain Sdel_0570 PF00501 AMP-binding enzyme Sdel_0570 PF13193 AMP-binding enzyme C-terminal domain Sdel_0571 PF08501 Shikimate dehydrogenase substrate binding domain Sdel_0572 PF04715 Anthranilate synthase component I, N terminal region Sdel_0572 PF00425 chorismate binding enzyme Sdel_0575 PF00464 Serine hydroxymethyltransferase Sdel_0576 PF01336 OB-fold nucleic acid binding domain Sdel_0576 PF00152 tRNA synthetases class II (D, K and N) Sdel_0577 PF01475 Ferric uptake regulator family Sdel_0579 PF08448 PAS fold Sdel_0579 PF00990 Diguanylate cyclase, GGDEF domain Sdel_0580 PF00437 Type II/IV secretion system protein Sdel_0581 PF02686 Glu-tRNAGln amidotransferase C subunit Sdel_0583 PF15437 Plasminogen-binding protein pgbA C-terminal Sdel_0585 PF03309 Type III pantothenate kinase Sdel_0586 PF01634 ATP phosphoribosyltransferase Sdel_0587 PF00072 Response regulator receiver domain Sdel_0588 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) Sdel_0588 PF00672 HAMP domain Sdel_0588 PF00072 Response regulator receiver domain Sdel_0588 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Sdel_0588 PF01627 Hpt domain Sdel_0588 PF00512 His Kinase A (phospho-acceptor) domain Sdel_0591 PF02151 UvrB/uvrC motif Sdel_0591 PF01541 GIY-YIG catalytic domain Sdel_0591 PF08459 UvrC Helix-hairpin-helix N-terminal Sdel_0593 PF00890 FAD binding domain Sdel_0594 PF03600 Citrate transporter Sdel_0595 PF00958 GMP synthase C terminal domain Sdel_0595 PF02540 NAD synthase Sdel_0595 PF00117 Glutamine amidotransferase class-I Sdel_0597 PF02843 Phosphoribosylglycinamide synthetase, C domain Sdel_0597 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain Sdel_0597 PF02844 Phosphoribosylglycinamide synthetase, N domain Sdel_0599 PF03968 OstA-like protein Sdel_0599 PF04453 LPS transport system D Sdel_0600 PF03725 3' exoribonuclease family, domain 2 Sdel_0600 PF01138 3' exoribonuclease family, domain 1 Sdel_0600 PF00575 S1 RNA binding domain Sdel_0600 PF00013 KH domain Sdel_0600 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain Sdel_0601 PF00137 ATP synthase subunit C Sdel_0604 PF00364 Biotin-requiring enzyme Sdel_0605 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit Sdel_0606 PF01293 Phosphoenolpyruvate carboxykinase Sdel_0607 PF14698 Argininosuccinate lyase C-terminal Sdel_0607 PF00206 Lyase Sdel_0608 PF01230 HIT domain Sdel_0609 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain Sdel_0609 PF01409 tRNA synthetases class II core domain (F) Sdel_0610 PF03147 Ferredoxin-fold anticodon binding domain Sdel_0610 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain Sdel_0610 PF01588 Putative tRNA binding domain Sdel_0610 PF03484 tRNA synthetase B5 domain Sdel_0611 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) Sdel_0612 PF02401 LytB protein Sdel_0613 PF00575 S1 RNA binding domain Sdel_0615 PF01842 ACT domain Sdel_0615 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Sdel_0615 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Sdel_0618 PF13533 Biotin-lipoyl like Sdel_0619 PF00873 AcrB/AcrD/AcrF family Sdel_0620 PF00873 AcrB/AcrD/AcrF family Sdel_0622 PF09285 Elongation factor P, C-terminal Sdel_0622 PF08207 Elongation factor P (EF-P) KOW-like domain Sdel_0622 PF01132 Elongation factor P (EF-P) OB domain Sdel_0631 PF02743 Cache domain Sdel_0631 PF00672 HAMP domain Sdel_0631 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Sdel_0632 PF02811 PHP domain Sdel_0632 PF14579 Helix-hairpin-helix motif Sdel_0632 PF17657 Bacterial DNA polymerase III alpha subunit finger domain Sdel_0632 PF07733 Bacterial DNA polymerase III alpha NTPase domain Sdel_0633 PF00512 His Kinase A (phospho-acceptor) domain Sdel_0633 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Sdel_0635 PF02386 Cation transport protein Sdel_0636 PF02080 TrkA-C domain Sdel_0636 PF02254 TrkA-N domain Sdel_0638 PF01098 Cell cycle protein Sdel_0639 PF00849 RNA pseudouridylate synthase Sdel_0639 PF01479 S4 domain Sdel_0640 PF00128 Alpha amylase, catalytic domain Sdel_0640 PF02903 Alpha amylase, N-terminal ig-like domain Sdel_0641 PF02390 Putative methyltransferase Sdel_0642 PF00005 ABC transporter Sdel_0645 PF00696 Amino acid kinase family Sdel_0646 PF01192 RNA polymerase Rpb6 Sdel_0647 PF13291 ACT domain Sdel_0647 PF04607 Region found in RelA / SpoT proteins Sdel_0647 PF02824 TGS domain Sdel_0648 PF00579 tRNA synthetases class I (W and Y) Sdel_0649 PF03060 Nitronate monooxygenase Sdel_0650 PF01520 N-acetylmuramoyl-L-alanine amidase Sdel_0653 PF02938 GAD domain Sdel_0653 PF00152 tRNA synthetases class II (D, K and N) Sdel_0653 PF01336 OB-fold nucleic acid binding domain Sdel_0655 PF00990 Diguanylate cyclase, GGDEF domain Sdel_0655 PF00072 Response regulator receiver domain Sdel_0657 PF01513 ATP-NAD kinase Sdel_0658 PF13476 AAA domain Sdel_0659 PF05230 MASE2 domain Sdel_0659 PF00990 Diguanylate cyclase, GGDEF domain Sdel_0660 PF01026 TatD related DNase Sdel_0661 PF01476 LysM domain Sdel_0661 PF05257 CHAP domain Sdel_0662 PF03330 Lytic transglycolase Sdel_0662 PF05036 Sporulation related domain Sdel_0663 PF00475 Imidazoleglycerol-phosphate dehydratase Sdel_0667 PF01926 50S ribosome-binding GTPase Sdel_0670 PF00905 Penicillin binding protein transpeptidase domain Sdel_0670 PF03717 Penicillin-binding Protein dimerisation domain Sdel_0671 PF02130 Uncharacterized protein family UPF0054 Sdel_0673 PF01588 Putative tRNA binding domain Sdel_0673 PF00133 tRNA synthetases class I (I, L, M and V) Sdel_0673 PF09334 tRNA synthetases class I (M) Sdel_0675 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain Sdel_0680 PF00749 tRNA synthetases class I (E and Q), catalytic domain Sdel_0681 PF00749 tRNA synthetases class I (E and Q), catalytic domain Sdel_0681 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain Sdel_0685 PF00486 Transcriptional regulatory protein, C terminal Sdel_0685 PF00072 Response regulator receiver domain Sdel_0686 PF00939 Sodium:sulfate symporter transmembrane region Sdel_0687 PF00512 His Kinase A (phospho-acceptor) domain Sdel_0687 PF18698 Histidine kinase sensor domain Sdel_0687 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Sdel_0687 PF00672 HAMP domain Sdel_0690 PF17287 POTRA domain Sdel_0690 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB Sdel_0690 PF08479 POTRA domain, ShlB-type Sdel_0694 PF12704 MacB-like periplasmic core domain Sdel_0694 PF02687 FtsX-like permease family Sdel_0694 PF00005 ABC transporter Sdel_0699 PF05140 ResB-like family Sdel_0699 PF01578 Cytochrome C assembly protein Sdel_0700 PF03916 Polysulphide reductase, NrfD Sdel_0701 PF00037 4Fe-4S binding domain Sdel_0701 PF13247 4Fe-4S dicluster domain Sdel_0702 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase Sdel_0702 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase Sdel_0704 PF00512 His Kinase A (phospho-acceptor) domain Sdel_0704 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Sdel_0704 PF00672 HAMP domain Sdel_0705 PF00072 Response regulator receiver domain Sdel_0705 PF00486 Transcriptional regulatory protein, C terminal Sdel_0706 PF03264 NapC/NirT cytochrome c family, N-terminal region Sdel_0707 PF02335 Cytochrome c552 Sdel_0708 PF01578 Cytochrome C assembly protein Sdel_0708 PF05140 ResB-like family Sdel_0713 PF04172 LrgB-like family Sdel_0714 PF03788 LrgA family Sdel_0717 PF02472 Biopolymer transport protein ExbD/TolR Sdel_0718 PF01618 MotA/TolQ/ExbB proton channel family Sdel_0724 PF10518 TAT (twin-arginine translocation) pathway signal sequence Sdel_0724 PF01568 Molydopterin dinucleotide binding domain Sdel_0724 PF00384 Molybdopterin oxidoreductase Sdel_0724 PF04879 Molybdopterin oxidoreductase Fe4S4 domain Sdel_0725 PF12800 4Fe-4S binding domain Sdel_0725 PF12838 4Fe-4S dicluster domain Sdel_0726 PF00037 4Fe-4S binding domain Sdel_0726 PF12801 4Fe-4S binding domain Sdel_0727 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) Sdel_0728 PF12800 4Fe-4S binding domain Sdel_0728 PF13187 4Fe-4S dicluster domain Sdel_0728 PF00037 4Fe-4S binding domain Sdel_0731 PF06071 Protein of unknown function (DUF933) Sdel_0731 PF01926 50S ribosome-binding GTPase Sdel_0735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Sdel_0735 PF00989 PAS fold Sdel_0735 PF00512 His Kinase A (phospho-acceptor) domain Sdel_0736 PF01627 Hpt domain Sdel_0736 PF00486 Transcriptional regulatory protein, C terminal Sdel_0736 PF00072 Response regulator receiver domain Sdel_0738 PF01568 Molydopterin dinucleotide binding domain Sdel_0738 PF18364 Molybdopterin oxidoreductase N-terminal domain Sdel_0738 PF00384 Molybdopterin oxidoreductase Sdel_0740 PF00355 Rieske [2Fe-2S] domain Sdel_0740 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal Sdel_0741 PF00032 Cytochrome b(C-terminal)/b6/petD Sdel_0741 PF00033 Cytochrome b/b6/petB Sdel_0742 PF02167 Cytochrome C1 family Sdel_0743 PF00486 Transcriptional regulatory protein, C terminal Sdel_0743 PF00072 Response regulator receiver domain Sdel_0744 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Sdel_0744 PF00989 PAS fold Sdel_0744 PF00512 His Kinase A (phospho-acceptor) domain Sdel_0745 PF01546 Peptidase family M20/M25/M40 Sdel_0745 PF07687 Peptidase dimerisation domain Sdel_0746 PF01546 Peptidase family M20/M25/M40 Sdel_0746 PF07687 Peptidase dimerisation domain Sdel_0747 PF03606 C4-dicarboxylate anaerobic carrier Sdel_0748 PF00990 Diguanylate cyclase, GGDEF domain Sdel_0748 PF10442 FIST C domain Sdel_0748 PF08495 FIST N domain Sdel_0748 PF00563 EAL domain Sdel_0749 PF02666 Phosphatidylserine decarboxylase Sdel_0750 PF03880 DbpA RNA binding domain Sdel_0750 PF00270 DEAD/DEAH box helicase Sdel_0750 PF00271 Helicase conserved C-terminal domain Sdel_0752 PF01709 Transcriptional regulator Sdel_0755 PF00118 TCP-1/cpn60 chaperonin family Sdel_0756 PF00166 Chaperonin 10 Kd subunit Sdel_0757 PF00589 Phage integrase family Sdel_0757 PF13356 Arm DNA-binding domain Sdel_0766 PF18821 Large polyvalent protein-associated domain 7 Sdel_0766 PF03432 Relaxase/Mobilisation nuclease domain Sdel_0778 PF01695 IstB-like ATP binding protein Sdel_0780 PF00665 Integrase core domain Sdel_0782 PF05016 ParE toxin of type II toxin-antitoxin system, parDE Sdel_0788 PF00665 Integrase core domain Sdel_0788 PF02796 Helix-turn-helix domain of resolvase Sdel_0789 PF05981 CreA protein Sdel_0792 PF17154 Gammaproteobacterial periplasmic sensor domain Sdel_0792 PF00563 EAL domain Sdel_0792 PF00990 Diguanylate cyclase, GGDEF domain Sdel_0792 PF00672 HAMP domain Sdel_0793 PF00005 ABC transporter Sdel_0793 PF00664 ABC transporter transmembrane region Sdel_0793 PF03412 Peptidase C39 family Sdel_0795 PF00072 Response regulator receiver domain Sdel_0795 PF00196 Bacterial regulatory proteins, luxR family Sdel_0799 PF06738 Putative threonine/serine exporter Sdel_0800 PF12821 Threonine/Serine exporter, ThrE Sdel_0801 PF00403 Heavy-metal-associated domain Sdel_0802 PF01022 Bacterial regulatory protein, arsR family Sdel_0805 PF04879 Molybdopterin oxidoreductase Fe4S4 domain Sdel_0805 PF12838 4Fe-4S dicluster domain Sdel_0805 PF00384 Molybdopterin oxidoreductase Sdel_0805 PF01568 Molydopterin dinucleotide binding domain Sdel_0805 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region Sdel_0806 PF00384 Molybdopterin oxidoreductase Sdel_0806 PF04879 Molybdopterin oxidoreductase Fe4S4 domain Sdel_0806 PF01568 Molydopterin dinucleotide binding domain Sdel_0807 PF13247 4Fe-4S dicluster domain Sdel_0810 PF03459 TOBE domain Sdel_0810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Sdel_0812 PF02537 CrcB-like protein, Camphor Resistance (CrcB) Sdel_0814 PF00005 ABC transporter Sdel_0815 PF01032 FecCD transport family Sdel_0818 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Sdel_0818 PF08447 PAS fold Sdel_0818 PF13426 PAS domain Sdel_0819 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Sdel_0819 PF02743 Cache domain Sdel_0819 PF00672 HAMP domain Sdel_0820 PF02581 Thiamine monophosphate synthase Sdel_0823 PF01810 LysE type translocator Sdel_0824 PF00892 EamA-like transporter family Sdel_0825 PF13472 GDSL-like Lipase/Acylhydrolase family Sdel_0828 PF14579 Helix-hairpin-helix motif Sdel_0828 PF17657 Bacterial DNA polymerase III alpha subunit finger domain Sdel_0828 PF11490 DNA polymerase III polC-type N-terminus II Sdel_0828 PF00929 Exonuclease Sdel_0828 PF02811 PHP domain Sdel_0828 PF07733 Bacterial DNA polymerase III alpha NTPase domain Sdel_0831 PF01717 Cobalamin-independent synthase, Catalytic domain Sdel_0831 PF08267 Cobalamin-independent synthase, N-terminal domain Sdel_0833 PF01435 Peptidase family M48 Sdel_0835 PF01739 CheR methyltransferase, SAM binding domain Sdel_0836 PF01339 CheB methylesterase Sdel_0836 PF00072 Response regulator receiver domain Sdel_0837 PF02789 Cytosol aminopeptidase family, N-terminal domain Sdel_0837 PF00883 Cytosol aminopeptidase family, catalytic domain Sdel_0838 PF09335 SNARE associated Golgi protein Sdel_0839 PF00291 Pyridoxal-phosphate dependent enzyme Sdel_0840 PF00156 Phosphoribosyl transferase domain Sdel_0842 PF02502 Ribose/Galactose Isomerase Sdel_0843 PF02163 Peptidase family M50 Sdel_0844 PF10502 Signal peptidase, peptidase S26 Sdel_0845 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain Sdel_0845 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain Sdel_0847 PF00202 Aminotransferase class-III Sdel_0850 PF04055 Radical SAM superfamily Sdel_0851 PF05193 Peptidase M16 inactive domain Sdel_0852 PF00271 Helicase conserved C-terminal domain Sdel_0852 PF04851 Type III restriction enzyme, res subunit Sdel_0858 PF02623 FliW protein Sdel_0859 PF13525 Outer membrane lipoprotein Sdel_0860 PF02190 ATP-dependent protease La (LON) substrate-binding domain Sdel_0860 PF05362 Lon protease (S16) C-terminal proteolytic domain Sdel_0860 PF00004 ATPase family associated with various cellular activities (AAA) Sdel_0861 PF01084 Ribosomal protein S18 Sdel_0862 PF00436 Single-strand binding protein family Sdel_0863 PF01250 Ribosomal protein S6 Sdel_0864 PF06144 DNA polymerase III, delta subunit Sdel_0865 PF00773 RNB domain Sdel_0867 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain Sdel_0867 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain Sdel_0868 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain Sdel_0869 PF03776 Septum formation topological specificity factor MinE Sdel_0873 PF03652 Holliday junction resolvase Sdel_0874 PF03458 UPF0126 domain Sdel_0875 PF00202 Aminotransferase class-III Sdel_0878 PF01648 4'-phosphopantetheinyl transferase superfamily Sdel_0879 PF03748 Flagellar basal body-associated protein FliL Sdel_0880 PF18073 Rubredoxin metal binding domain Sdel_0881 PF00448 SRP54-type protein, GTPase domain Sdel_0882 PF00578 AhpC/TSA family Sdel_0884 PF12072 Domain of unknown function (DUF3552) Sdel_0884 PF01966 HD domain Sdel_0885 PF00005 ABC transporter Sdel_0885 PF00664 ABC transporter transmembrane region Sdel_0890 PF01758 Sodium Bile acid symporter family Sdel_0891 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD Sdel_0892 PF00486 Transcriptional regulatory protein, C terminal Sdel_0892 PF00072 Response regulator receiver domain Sdel_0893 PF08448 PAS fold Sdel_0893 PF00990 Diguanylate cyclase, GGDEF domain Sdel_0893 PF00563 EAL domain Sdel_0894 PF00672 HAMP domain Sdel_0894 PF18698 Histidine kinase sensor domain Sdel_0894 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Sdel_0894 PF00512 His Kinase A (phospho-acceptor) domain Sdel_0896 PF04073 Aminoacyl-tRNA editing domain Sdel_0901 PF18395 Cas3 C-terminal domain Sdel_0901 PF18019 HD domain Sdel_0901 PF00270 DEAD/DEAH box helicase Sdel_0903 PF01867 CRISPR associated protein Cas1 Sdel_0906 PF00925 GTP cyclohydrolase II Sdel_0906 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase Sdel_0907 PF00999 Sodium/hydrogen exchanger family Sdel_0907 PF02254 TrkA-N domain Sdel_0912 PF00072 Response regulator receiver domain Sdel_0913 PF00512 His Kinase A (phospho-acceptor) domain Sdel_0913 PF00672 HAMP domain Sdel_0913 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) Sdel_0913 PF00072 Response regulator receiver domain Sdel_0913 PF01627 Hpt domain Sdel_0913 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Sdel_0919 PF02146 Sir2 family Sdel_0922 PF00665 Integrase core domain Sdel_0922 PF02796 Helix-turn-helix domain of resolvase Sdel_0923 PF01695 IstB-like ATP binding protein Sdel_0933 PF01695 IstB-like ATP binding protein Sdel_0934 PF02796 Helix-turn-helix domain of resolvase Sdel_0934 PF00665 Integrase core domain Sdel_0942 PF02796 Helix-turn-helix domain of resolvase Sdel_0942 PF00665 Integrase core domain Sdel_0943 PF01695 IstB-like ATP binding protein Sdel_0948 PF13304 AAA domain, putative AbiEii toxin, Type IV TA system Sdel_0958 PF01966 HD domain Sdel_0966 PF14659 Phage integrase, N-terminal SAM-like domain Sdel_0966 PF00589 Phage integrase family Sdel_0967 PF00216 Bacterial DNA-binding protein Sdel_0969 PF01580 FtsK/SpoIIIE family Sdel_0969 PF09397 Ftsk gamma domain Sdel_0969 PF17854 FtsK alpha domain Sdel_0970 PF11791 Aconitate B N-terminal domain Sdel_0970 PF06434 Aconitate hydratase 2 N-terminus Sdel_0970 PF00330 Aconitase family (aconitate hydratase) Sdel_0971 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase Sdel_0972 PF00391 PEP-utilising enzyme, mobile domain Sdel_0972 PF02896 PEP-utilising enzyme, TIM barrel domain Sdel_0972 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain Sdel_0974 PF01636 Phosphotransferase enzyme family Sdel_0975 PF01327 Polypeptide deformylase Sdel_0976 PF08359 YsiA-like protein, C-terminal region Sdel_0976 PF00440 Bacterial regulatory proteins, tetR family Sdel_0979 PF00873 AcrB/AcrD/AcrF family Sdel_0982 PF00672 HAMP domain Sdel_0982 PF16591 Helical bimodular sensor domain Sdel_0982 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Sdel_0984 PF00005 ABC transporter Sdel_0984 PF03412 Peptidase C39 family Sdel_0984 PF00664 ABC transporter transmembrane region Sdel_0986 PF06594 Haemolysin-type calcium binding protein related domain Sdel_0986 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) Sdel_0991 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) Sdel_0991 PF06594 Haemolysin-type calcium binding protein related domain Sdel_0994 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) Sdel_0994 PF06594 Haemolysin-type calcium binding protein related domain Sdel_0997 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) Sdel_0997 PF06594 Haemolysin-type calcium binding protein related domain Sdel_1000 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) Sdel_1000 PF06594 Haemolysin-type calcium binding protein related domain Sdel_1004 PF01695 IstB-like ATP binding protein Sdel_1007 PF01695 IstB-like ATP binding protein Sdel_1008 PF00665 Integrase core domain Sdel_1008 PF02796 Helix-turn-helix domain of resolvase Sdel_1014 PF13291 ACT domain Sdel_1014 PF00291 Pyridoxal-phosphate dependent enzyme Sdel_1015 PF13380 CoA binding domain Sdel_1016 PF05958 tRNA (Uracil-5-)-methyltransferase Sdel_1020 PF04376 Arginine-tRNA-protein transferase, N terminus Sdel_1020 PF04377 Arginine-tRNA-protein transferase, C terminus Sdel_1022 PF04552 Sigma-54, DNA binding domain Sdel_1022 PF00309 Sigma-54 factor, Activator interacting domain (AID) Sdel_1022 PF04963 Sigma-54 factor, core binding domain Sdel_1023 PF12399 Branched-chain amino acid ATP-binding cassette transporter Sdel_1023 PF00005 ABC transporter Sdel_1024 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE Sdel_1025 PF02885 Glycosyl transferase family, helical bundle domain Sdel_1025 PF00591 Glycosyl transferase family, a/b domain Sdel_1026 PF01479 S4 domain Sdel_1027 PF00764 Arginosuccinate synthase Sdel_1029 PF03948 Ribosomal protein L9, C-terminal domain Sdel_1029 PF01281 Ribosomal protein L9, N-terminal domain Sdel_1030 PF00227 Proteasome subunit Sdel_1031 PF07724 AAA domain (Cdc48 subfamily) Sdel_1031 PF10431 C-terminal, D2-small domain, of ClpB protein Sdel_1032 PF07650 KH domain Sdel_1032 PF01926 50S ribosome-binding GTPase Sdel_1039 PF00437 Type II/IV secretion system protein Sdel_1040 PF00482 Type II secretion system (T2SS), protein F Sdel_1042 PF02107 Flagellar L-ring protein Sdel_1044 PF00871 Acetokinase family Sdel_1045 PF07085 DRTGG domain Sdel_1045 PF01515 Phosphate acetyl/butaryl transferase Sdel_1046 PF08245 Mur ligase middle domain Sdel_1046 PF01225 Mur ligase family, catalytic domain Sdel_1046 PF02875 Mur ligase family, glutamate ligase domain Sdel_1047 PF00708 Acylphosphatase Sdel_1048 PF08241 Methyltransferase domain Sdel_1048 PF12697 Alpha/beta hydrolase family Sdel_1050 PF01820 D-ala D-ala ligase N-terminus Sdel_1050 PF07478 D-ala D-ala ligase C-terminus Sdel_1051 PF01330 RuvA N terminal domain Sdel_1051 PF07499 RuvA, C-terminal domain Sdel_1053 PF03023 Lipid II flippase MurJ Sdel_1054 PF09190 DALR domain Sdel_1054 PF01406 tRNA synthetases class I (C) catalytic domain Sdel_1055 PF00005 ABC transporter Sdel_1055 PF00664 ABC transporter transmembrane region Sdel_1056 PF01180 Dihydroorotate dehydrogenase Sdel_1058 PF00701 Dihydrodipicolinate synthetase family Sdel_1060 PF01066 CDP-alcohol phosphatidyltransferase Sdel_1061 PF17820 PDZ domain Sdel_1061 PF02163 Peptidase family M50 Sdel_1062 PF01168 Alanine racemase, N-terminal domain Sdel_1063 PF17158 Membrane-associated sensor, integral membrane domain Sdel_1063 PF00990 Diguanylate cyclase, GGDEF domain Sdel_1066 PF01914 MarC family integral membrane protein Sdel_1067 PF00375 Sodium:dicarboxylate symporter family Sdel_1068 PF03553 Na+/H+ antiporter family Sdel_1068 PF13726 Na+-H+ antiporter family Sdel_1069 PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase Sdel_1069 PF09363 XFP C-terminal domain Sdel_1069 PF09364 XFP N-terminal domain Sdel_1070 PF01638 HxlR-like helix-turn-helix Sdel_1071 PF02525 Flavodoxin-like fold Sdel_1072 PF00881 Nitroreductase family Sdel_1073 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Sdel_1073 PF02743 Cache domain Sdel_1073 PF00672 HAMP domain Sdel_1079 PF17674 HHH domain Sdel_1079 PF00575 S1 RNA binding domain Sdel_1079 PF09371 Tex-like protein N-terminal domain Sdel_1079 PF16921 Tex protein YqgF-like domain Sdel_1082 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Sdel_1082 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain Sdel_1082 PF00205 Thiamine pyrophosphate enzyme, central domain Sdel_1083 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II Sdel_1083 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg Sdel_1083 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase Sdel_1086 PF00549 CoA-ligase Sdel_1086 PF02629 CoA binding domain Sdel_1087 PF00549 CoA-ligase Sdel_1087 PF08442 ATP-grasp domain Sdel_1088 PF00056 lactate/malate dehydrogenase, NAD binding domain Sdel_1088 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain Sdel_1089 PF03971 Monomeric isocitrate dehydrogenase Sdel_1092 PF13419 Haloacid dehalogenase-like hydrolase Sdel_1094 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA Sdel_1095 PF00586 AIR synthase related protein, N-terminal domain Sdel_1095 PF02769 AIR synthase related protein, C-terminal domain Sdel_1096 PF01924 Hydrogenase formation hypA family Sdel_1097 PF01455 HupF/HypC family Sdel_1098 PF02492 CobW/HypB/UreG, nucleotide-binding domain Sdel_1100 PF01402 Ribbon-helix-helix protein, copG family Sdel_1100 PF08753 NikR C terminal nickel binding domain Sdel_1101 PF01300 Telomere recombination Sdel_1101 PF17788 HypF Kae1-like domain Sdel_1101 PF00708 Acylphosphatase Sdel_1101 PF07503 HypF finger Sdel_1103 PF01750 Hydrogenase maturation protease Sdel_1104 PF01292 Prokaryotic cytochrome b561 Sdel_1105 PF00374 Nickel-dependent hydrogenase Sdel_1106 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal Sdel_1106 PF10518 TAT (twin-arginine translocation) pathway signal sequence Sdel_1106 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit Sdel_1108 PF00342 Phosphoglucose isomerase Sdel_1109 PF04055 Radical SAM superfamily Sdel_1109 PF08497 Radical SAM N-terminal Sdel_1112 PF14659 Phage integrase, N-terminal SAM-like domain Sdel_1112 PF00589 Phage integrase family Sdel_1122 PF00813 FliP family Sdel_1123 PF00132 Bacterial transferase hexapeptide (six repeats) Sdel_1123 PF12804 MobA-like NTP transferase domain Sdel_1124 PF04127 DNA / pantothenate metabolism flavoprotein Sdel_1124 PF02441 Flavoprotein Sdel_1126 PF06750 Bacterial Peptidase A24 N-terminal domain Sdel_1126 PF01478 Type IV leader peptidase family Sdel_1128 PF01416 tRNA pseudouridine synthase Sdel_1129 PF00933 Glycosyl hydrolase family 3 N terminal domain Sdel_1130 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus Sdel_1130 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus Sdel_1131 PF02637 GatB domain Sdel_1131 PF02934 GatB/GatE catalytic domain Sdel_1134 PF00119 ATP synthase A chain Sdel_1135 PF01361 Tautomerase enzyme Sdel_1136 PF00916 Sulfate permease family Sdel_1136 PF01740 STAS domain Sdel_1138 PF00528 Binding-protein-dependent transport system inner membrane component Sdel_1138 PF12911 N-terminal TM domain of oligopeptide transport permease C Sdel_1139 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Sdel_1139 PF07196 Flagellin hook IN motif Sdel_1143 PF02119 Flagellar P-ring protein Sdel_1147 PF02465 Flagellar hook-associated protein 2 N-terminus Sdel_1147 PF07195 Flagellar hook-associated protein 2 C-terminus Sdel_1147 PF07196 Flagellin hook IN motif Sdel_1148 PF02561 Flagellar protein FliS Sdel_1151 PF00875 DNA photolyase Sdel_1151 PF03441 FAD binding domain of DNA photolyase Sdel_1153 PF03109 ABC1 family Sdel_1154 PF00881 Nitroreductase family Sdel_1157 PF00465 Iron-containing alcohol dehydrogenase Sdel_1160 PF07690 Major Facilitator Superfamily Sdel_1162 PF02129 X-Pro dipeptidyl-peptidase (S15 family) Sdel_1163 PF06719 AraC-type transcriptional regulator N-terminus Sdel_1163 PF12833 Helix-turn-helix domain Sdel_1164 PF02321 Outer membrane efflux protein Sdel_1165 PF00873 AcrB/AcrD/AcrF family Sdel_1166 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion Sdel_1167 PF00440 Bacterial regulatory proteins, tetR family Sdel_1168 PF01618 MotA/TolQ/ExbB proton channel family Sdel_1169 PF13677 Membrane MotB of proton-channel complex MotA/MotB Sdel_1169 PF00691 OmpA family Sdel_1170 PF16326 ABC transporter C-terminal domain Sdel_1170 PF12848 ABC transporter Sdel_1170 PF00005 ABC transporter Sdel_1172 PF01625 Peptide methionine sulfoxide reductase Sdel_1173 PF00753 Metallo-beta-lactamase superfamily Sdel_1173 PF12706 Beta-lactamase superfamily domain Sdel_1174 PF02535 ZIP Zinc transporter Sdel_1176 PF08543 Phosphomethylpyrimidine kinase Sdel_1177 PF02254 TrkA-N domain Sdel_1177 PF02080 TrkA-C domain Sdel_1177 PF00999 Sodium/hydrogen exchanger family Sdel_1178 PF17763 Glutaminase/Asparaginase C-terminal domain Sdel_1178 PF00710 Asparaginase, N-terminal Sdel_1179 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Sdel_1179 PF00512 His Kinase A (phospho-acceptor) domain Sdel_1180 PF00072 Response regulator receiver domain Sdel_1180 PF00486 Transcriptional regulatory protein, C terminal Sdel_1181 PF01142 tRNA pseudouridine synthase D (TruD) Sdel_1182 PF00586 AIR synthase related protein, N-terminal domain Sdel_1182 PF02769 AIR synthase related protein, C-terminal domain Sdel_1186 PF02554 Carbon starvation protein CstA Sdel_1186 PF13722 5TM C-terminal transporter carbon starvation CstA Sdel_1187 PF04328 Selenoprotein, putative Sdel_1188 PF02492 CobW/HypB/UreG, nucleotide-binding domain Sdel_1188 PF07683 Cobalamin synthesis protein cobW C-terminal domain Sdel_1194 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit Sdel_1196 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit Sdel_1196 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit Sdel_1196 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit Sdel_1197 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit Sdel_1197 PF00374 Nickel-dependent hydrogenase Sdel_1198 PF13247 4Fe-4S dicluster domain Sdel_1199 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA Sdel_1200 PF07992 Pyridine nucleotide-disulphide oxidoreductase Sdel_1200 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Sdel_1201 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Sdel_1201 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Sdel_1201 PF01842 ACT domain Sdel_1202 PF12729 Four helix bundle sensory module for signal transduction Sdel_1202 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Sdel_1202 PF00672 HAMP domain Sdel_1205 PF00672 HAMP domain Sdel_1205 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Sdel_1210 PF01063 Amino-transferase class IV Sdel_1211 PF00990 Diguanylate cyclase, GGDEF domain Sdel_1211 PF17158 Membrane-associated sensor, integral membrane domain Sdel_1213 PF01863 Protein of unknown function DUF45 Sdel_1219 PF01594 AI-2E family transporter Sdel_1222 PF00005 ABC transporter Sdel_1223 PF00675 Insulinase (Peptidase family M16) Sdel_1223 PF05193 Peptidase M16 inactive domain Sdel_1227 PF00990 Diguanylate cyclase, GGDEF domain Sdel_1227 PF00563 EAL domain Sdel_1227 PF03707 Bacterial signalling protein N terminal repeat Sdel_1228 PF01980 tRNA-methyltransferase O Sdel_1228 PF18389 TrmO C-terminal domain Sdel_1230 PF02574 Homocysteine S-methyltransferase Sdel_1233 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Sdel_1233 PF00512 His Kinase A (phospho-acceptor) domain Sdel_1234 PF00563 EAL domain Sdel_1234 PF08495 FIST N domain Sdel_1234 PF00990 Diguanylate cyclase, GGDEF domain Sdel_1234 PF10442 FIST C domain Sdel_1235 PF00486 Transcriptional regulatory protein, C terminal Sdel_1235 PF00072 Response regulator receiver domain Sdel_1236 PF03167 Uracil DNA glycosylase superfamily Sdel_1238 PF03061 Thioesterase superfamily Sdel_1239 PF00589 Phage integrase family Sdel_1239 PF14659 Phage integrase, N-terminal SAM-like domain Sdel_1245 PF01695 IstB-like ATP binding protein Sdel_1246 PF02796 Helix-turn-helix domain of resolvase Sdel_1246 PF00665 Integrase core domain Sdel_1250 PF06594 Haemolysin-type calcium binding protein related domain Sdel_1250 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) Sdel_1254 PF00665 Integrase core domain Sdel_1254 PF02796 Helix-turn-helix domain of resolvase Sdel_1255 PF01695 IstB-like ATP binding protein Sdel_1257 PF01695 IstB-like ATP binding protein Sdel_1258 PF02796 Helix-turn-helix domain of resolvase Sdel_1258 PF00665 Integrase core domain Sdel_1262 PF00004 ATPase family associated with various cellular activities (AAA) Sdel_1262 PF17862 AAA+ lid domain Sdel_1262 PF01434 Peptidase family M41 Sdel_1263 PF04055 Radical SAM superfamily Sdel_1263 PF00919 Uncharacterized protein family UPF0004 Sdel_1265 PF01761 3-dehydroquinate synthase Sdel_1267 PF01702 Queuine tRNA-ribosyltransferase Sdel_1268 PF00589 Phage integrase family Sdel_1268 PF18644 Phage integrase SAM-like domain Sdel_1270 PF00300 Histidine phosphatase superfamily (branch 1) Sdel_1272 PF00486 Transcriptional regulatory protein, C terminal Sdel_1272 PF00072 Response regulator receiver domain Sdel_1273 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Sdel_1273 PF00512 His Kinase A (phospho-acceptor) domain Sdel_1274 PF00939 Sodium:sulfate symporter transmembrane region Sdel_1275 PF05683 Fumarase C-terminus Sdel_1275 PF05681 Fumarate hydratase (Fumerase) Sdel_1276 PF05683 Fumarase C-terminus Sdel_1276 PF05681 Fumarate hydratase (Fumerase) Sdel_1277 PF09861 Lactate racemase N-terminal domain Sdel_1278 PF01969 Protein of unknown function DUF111 Sdel_1279 PF02540 NAD synthase Sdel_1280 PF00731 AIR carboxylase Sdel_1282 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) Sdel_1283 PF03453 MoeA N-terminal region (domain I and II) Sdel_1283 PF03454 MoeA C-terminal region (domain IV) Sdel_1283 PF00994 Probable molybdopterin binding domain Sdel_1285 PF02441 Flavoprotein Sdel_1286 PF01467 Cytidylyltransferase-like Sdel_1287 PF02223 Thymidylate kinase Sdel_1288 PF03129 Anticodon binding domain Sdel_1288 PF13393 Histidyl-tRNA synthetase Sdel_1289 PF17944 Arginine decarboxylase C-terminal helical extension Sdel_1289 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain Sdel_1289 PF17810 Arginine decarboxylase helical bundle domain Sdel_1290 PF00132 Bacterial transferase hexapeptide (six repeats) Sdel_1291 PF00155 Aminotransferase class I and II Sdel_1292 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Sdel_1292 PF07992 Pyridine nucleotide-disulphide oxidoreductase Sdel_1294 PF00132 Bacterial transferase hexapeptide (six repeats) Sdel_1294 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD Sdel_1295 PF10369 Small subunit of acetolactate synthase Sdel_1296 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain Sdel_1296 PF00205 Thiamine pyrophosphate enzyme, central domain Sdel_1296 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Sdel_1298 PF07992 Pyridine nucleotide-disulphide oxidoreductase Sdel_1302 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ Sdel_1303 PF04166 Pyridoxal phosphate biosynthetic protein PdxA Sdel_1306 PF00218 Indole-3-glycerol phosphate synthase Sdel_1308 PF03692 Putative zinc- or iron-chelating domain Sdel_1309 PF05175 Methyltransferase small domain Sdel_1309 PF08468 Methyltransferase small domain N-terminal Sdel_1311 PF07992 Pyridine nucleotide-disulphide oxidoreductase Sdel_1312 PF00171 Aldehyde dehydrogenase family Sdel_1313 PF00005 ABC transporter Sdel_1313 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Sdel_1314 PF09335 SNARE associated Golgi protein Sdel_1315 PF01474 Class-II DAHP synthetase family Sdel_1316 PF08447 PAS fold Sdel_1316 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Sdel_1316 PF13426 PAS domain Sdel_1319 PF02915 Rubrerythrin Sdel_1321 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase Sdel_1322 PF03900 Porphobilinogen deaminase, C-terminal domain Sdel_1322 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain Sdel_1324 PF04186 FxsA cytoplasmic membrane protein Sdel_1325 PF03129 Anticodon binding domain Sdel_1325 PF04073 Aminoacyl-tRNA editing domain Sdel_1325 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) Sdel_1326 PF01488 Shikimate / quinate 5-dehydrogenase Sdel_1326 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain Sdel_1326 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain Sdel_1327 PF00348 Polyprenyl synthetase Sdel_1330 PF01053 Cys/Met metabolism PLP-dependent enzyme Sdel_1331 PF02082 Transcriptional regulator Sdel_1332 PF00291 Pyridoxal-phosphate dependent enzyme Sdel_1333 PF00990 Diguanylate cyclase, GGDEF domain Sdel_1333 PF05230 MASE2 domain Sdel_1334 PF00255 Glutathione peroxidase Sdel_1335 PF10458 Valyl tRNA synthetase tRNA binding arm Sdel_1335 PF08264 Anticodon-binding domain of tRNA Sdel_1335 PF00133 tRNA synthetases class I (I, L, M and V) Sdel_1336 PF00994 Probable molybdopterin binding domain Sdel_1337 PF00815 Histidinol dehydrogenase Sdel_1339 PF01116 Fructose-bisphosphate aldolase class-II Sdel_1341 PF10576 Iron-sulfur binding domain of endonuclease III Sdel_1341 PF00633 Helix-hairpin-helix motif Sdel_1341 PF00730 HhH-GPD superfamily base excision DNA repair protein Sdel_1343 PF01546 Peptidase family M20/M25/M40 Sdel_1343 PF07687 Peptidase dimerisation domain Sdel_1345 PF08003 Protein of unknown function (DUF1698) Sdel_1346 PF01008 Initiation factor 2 subunit family Sdel_1346 PF03061 Thioesterase superfamily Sdel_1347 PF00753 Metallo-beta-lactamase superfamily Sdel_1348 PF02540 NAD synthase Sdel_1349 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family Sdel_1350 PF02606 Tetraacyldisaccharide-1-P 4'-kinase Sdel_1351 PF00696 Amino acid kinase family Sdel_1352 PF00291 Pyridoxal-phosphate dependent enzyme Sdel_1353 PF02348 Cytidylyltransferase Sdel_1355 PF00085 Thioredoxin Sdel_1355 PF02683 Cytochrome C biogenesis protein transmembrane region Sdel_1355 PF11412 Disulphide bond corrector protein DsbC Sdel_1356 PF03976 Polyphosphate kinase 2 (PPK2) Sdel_1357 PF00072 Response regulator receiver domain Sdel_1358 PF00012 Hsp70 protein Sdel_1359 PF01025 GrpE Sdel_1363 PF00312 Ribosomal protein S15 Sdel_1364 PF02082 Transcriptional regulator Sdel_1365 PF00771 FHIPEP family Sdel_1368 PF13649 Methyltransferase domain Sdel_1369 PF06574 FAD synthetase Sdel_1370 PF00163 Ribosomal protein S4/S9 N-terminal domain Sdel_1370 PF01479 S4 domain Sdel_1371 PF12826 Helix-hairpin-helix motif Sdel_1371 PF03120 NAD-dependent DNA ligase OB-fold domain Sdel_1371 PF01653 NAD-dependent DNA ligase adenylation domain Sdel_1371 PF00533 BRCA1 C Terminus (BRCT) domain Sdel_1372 PF01925 Sulfite exporter TauE/SafE Sdel_1374 PF00809 Pterin binding enzyme Sdel_1375 PF12169 DNA polymerase III subunits gamma and tau domain III Sdel_1377 PF01842 ACT domain Sdel_1377 PF00696 Amino acid kinase family Sdel_1377 PF13840 ACT domain Sdel_1378 PF00293 NUDIX domain Sdel_1379 PF06969 HemN C-terminal domain Sdel_1379 PF04055 Radical SAM superfamily Sdel_1380 PF00999 Sodium/hydrogen exchanger family Sdel_1380 PF02254 TrkA-N domain Sdel_1381 PF13411 MerR HTH family regulatory protein Sdel_1382 PF01556 DnaJ C terminal domain Sdel_1382 PF00226 DnaJ domain Sdel_1383 PF17820 PDZ domain Sdel_1383 PF13180 PDZ domain Sdel_1384 PF00486 Transcriptional regulatory protein, C terminal Sdel_1384 PF00072 Response regulator receiver domain Sdel_1385 PF00512 His Kinase A (phospho-acceptor) domain Sdel_1385 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Sdel_1388 PF01043 SecA preprotein cross-linking domain Sdel_1388 PF07516 SecA Wing and Scaffold domain Sdel_1388 PF00271 Helicase conserved C-terminal domain Sdel_1388 PF02810 SEC-C motif Sdel_1388 PF07517 SecA DEAD-like domain Sdel_1390 PF06965 Na+/H+ antiporter 1 Sdel_1393 PF14849 YidC periplasmic domain Sdel_1393 PF02096 60Kd inner membrane protein Sdel_1394 PF01809 Putative membrane protein insertion efficiency factor Sdel_1396 PF00468 Ribosomal protein L34 Sdel_1400 PF10431 C-terminal, D2-small domain, of ClpB protein Sdel_1400 PF02861 Clp amino terminal domain, pathogenicity island component Sdel_1400 PF17871 AAA lid domain Sdel_1400 PF07724 AAA domain (Cdc48 subfamily) Sdel_1400 PF00004 ATPase family associated with various cellular activities (AAA) Sdel_1401 PF03572 Peptidase family S41 Sdel_1401 PF13180 PDZ domain Sdel_1402 PF01259 SAICAR synthetase Sdel_1403 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase Sdel_1406 PF01553 Acyltransferase Sdel_1407 PF00183 Hsp90 protein Sdel_1408 PF04471 Restriction endonuclease Sdel_1408 PF14338 Mrr N-terminal domain Sdel_1409 PF03190 Protein of unknown function, DUF255 Sdel_1410 PF00580 UvrD/REP helicase N-terminal domain Sdel_1410 PF13361 UvrD-like helicase C-terminal domain Sdel_1416 PF02689 Helicase Sdel_1416 PF05970 PIF1-like helicase Sdel_1419 PF07693 KAP family P-loop domain Sdel_1422 PF02646 RmuC family Sdel_1424 PF01795 MraW methylase family Sdel_1425 PF00202 Aminotransferase class-III Sdel_1427 PF02491 SHS2 domain inserted in FTSA Sdel_1428 PF00091 Tubulin/FtsZ family, GTPase domain Sdel_1428 PF12327 FtsZ family, C-terminal domain Sdel_1430 PF05175 Methyltransferase small domain Sdel_1430 PF02390 Putative methyltransferase Sdel_1430 PF17827 PrmC N-terminal domain Sdel_1431 PF01435 Peptidase family M48 Sdel_1432 PF12729 Four helix bundle sensory module for signal transduction Sdel_1432 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Sdel_1432 PF00672 HAMP domain Sdel_1434 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Sdel_1434 PF00672 HAMP domain Sdel_1435 PF01883 Iron-sulfur cluster assembly protein Sdel_1438 PF02142 MGS-like domain Sdel_1438 PF01808 AICARFT/IMPCHase bienzyme Sdel_1439 PF02600 Disulfide bond formation protein DsbB Sdel_1440 PF13462 Thioredoxin Sdel_1440 PF06965 Na+/H+ antiporter 1 Sdel_1441 PF03061 Thioesterase superfamily Sdel_1443 PF00072 Response regulator receiver domain Sdel_1443 PF00486 Transcriptional regulatory protein, C terminal Sdel_1444 PF14537 Cytochrome c3 Sdel_1444 PF00890 FAD binding domain Sdel_1447 PF00155 Aminotransferase class I and II Sdel_1450 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain Sdel_1450 PF00586 AIR synthase related protein, N-terminal domain Sdel_1450 PF02769 AIR synthase related protein, C-terminal domain Sdel_1451 PF03707 Bacterial signalling protein N terminal repeat Sdel_1451 PF00990 Diguanylate cyclase, GGDEF domain Sdel_1451 PF00563 EAL domain Sdel_1452 PF02416 mttA/Hcf106 family Sdel_1453 PF00902 Sec-independent protein translocase protein (TatC) Sdel_1454 PF02547 Queuosine biosynthesis protein Sdel_1456 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain Sdel_1456 PF00753 Metallo-beta-lactamase superfamily Sdel_1456 PF10996 Beta-Casp domain Sdel_1457 PF00501 AMP-binding enzyme Sdel_1459 PF00593 TonB dependent receptor Sdel_1459 PF07715 TonB-dependent Receptor Plug Domain Sdel_1460 PF00512 His Kinase A (phospho-acceptor) domain Sdel_1460 PF02702 Osmosensitive K+ channel His kinase sensor domain Sdel_1460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Sdel_1460 PF13493 Domain of unknown function (DUF4118) Sdel_1460 PF13492 GAF domain Sdel_1461 PF00486 Transcriptional regulatory protein, C terminal Sdel_1461 PF00072 Response regulator receiver domain Sdel_1462 PF02386 Cation transport protein Sdel_1463 PF02254 TrkA-N domain Sdel_1463 PF02080 TrkA-C domain Sdel_1464 PF01641 SelR domain Sdel_1465 PF03471 Transporter associated domain Sdel_1465 PF01595 Cyclin M transmembrane N-terminal domain Sdel_1465 PF00571 CBS domain Sdel_1467 PF12804 MobA-like NTP transferase domain Sdel_1468 PF02625 XdhC and CoxI family Sdel_1468 PF13478 XdhC Rossmann domain Sdel_1469 PF14535 AMP-binding enzyme C-terminal domain Sdel_1469 PF00501 AMP-binding enzyme Sdel_1470 PF13186 Iron-sulfur cluster-binding domain Sdel_1470 PF04055 Radical SAM superfamily Sdel_1474 PF02027 RolB/RolC glucosidase family Sdel_1474 PF01593 Flavin containing amine oxidoreductase Sdel_1475 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase Sdel_1475 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain Sdel_1475 PF01799 [2Fe-2S] binding domain Sdel_1475 PF00111 2Fe-2S iron-sulfur cluster binding domain Sdel_1476 PF00672 HAMP domain Sdel_1476 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Sdel_1476 PF00512 His Kinase A (phospho-acceptor) domain Sdel_1476 PF13426 PAS domain Sdel_1477 PF01627 Hpt domain Sdel_1477 PF00072 Response regulator receiver domain Sdel_1477 PF00486 Transcriptional regulatory protein, C terminal Sdel_1480 PF03824 High-affinity nickel-transport protein Sdel_1483 PF14437 MafB19-like deaminase Sdel_1487 PF02146 Sir2 family Sdel_1488 PF02607 B12 binding domain Sdel_1488 PF00809 Pterin binding enzyme Sdel_1488 PF02310 B12 binding domain Sdel_1488 PF02574 Homocysteine S-methyltransferase Sdel_1488 PF02965 Vitamin B12 dependent methionine synthase, activation domain Sdel_1490 PF13458 Periplasmic binding protein Sdel_1491 PF02743 Cache domain Sdel_1491 PF00672 HAMP domain Sdel_1491 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Sdel_1492 PF00884 Sulfatase Sdel_1493 PF00909 Ammonium Transporter Family Sdel_1494 PF00543 Nitrogen regulatory protein P-II Sdel_1501 PF12950 TaqI-like C-terminal specificity domain Sdel_1501 PF07669 Eco57I restriction-modification methylase Sdel_1504 PF02092 Glycyl-tRNA synthetase beta subunit Sdel_1507 PF00484 Carbonic anhydrase Sdel_1508 PF06865 Pyrimidine/purine nucleoside phosphorylase Sdel_1511 PF00588 SpoU rRNA Methylase family Sdel_1512 PF01842 ACT domain Sdel_1512 PF00551 Formyl transferase Sdel_1513 PF12627 Probable RNA and SrmB- binding site of polymerase A Sdel_1513 PF13735 tRNA nucleotidyltransferase domain 2 putative Sdel_1513 PF01743 Poly A polymerase head domain Sdel_1516 PF00180 Isocitrate/isopropylmalate dehydrogenase Sdel_1517 PF00694 Aconitase C-terminal domain Sdel_1523 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system Sdel_1525 PF00849 RNA pseudouridylate synthase Sdel_1525 PF01479 S4 domain Sdel_1526 PF00005 ABC transporter Sdel_1527 PF01022 Bacterial regulatory protein, arsR family Sdel_1528 PF02040 Arsenical pump membrane protein Sdel_1529 PF00174 Oxidoreductase molybdopterin binding domain Sdel_1530 PF01794 Ferric reductase like transmembrane component Sdel_1531 PF06044 Dam-replacing family Sdel_1531 PF17726 Dam-replacing HTH domain Sdel_1533 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) Sdel_1534 PF09962 Uncharacterized conserved protein (DUF2196) Sdel_1535 PF09382 RQC domain Sdel_1535 PF00271 Helicase conserved C-terminal domain Sdel_1535 PF16124 RecQ zinc-binding Sdel_1535 PF00570 HRDC domain Sdel_1535 PF00270 DEAD/DEAH box helicase Sdel_1538 PF00271 Helicase conserved C-terminal domain Sdel_1538 PF00270 DEAD/DEAH box helicase Sdel_1540 PF03831 PhnA domain Sdel_1540 PF08274 PhnA Zinc-Ribbon Sdel_1542 PF03591 AzlC protein Sdel_1544 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Sdel_1544 PF00460 Flagella basal body rod protein Sdel_1545 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Sdel_1545 PF00460 Flagella basal body rod protein Sdel_1546 PF00140 Sigma-70 factor, region 1.2 Sdel_1546 PF04545 Sigma-70, region 4 Sdel_1546 PF04539 Sigma-70 region 3 Sdel_1546 PF04542 Sigma-70 region 2 Sdel_1549 PF00210 Ferritin-like domain Sdel_1553 PF04023 FeoA domain Sdel_1553 PF07664 Ferrous iron transport protein B C terminus Sdel_1553 PF17910 FeoB cytosolic helical domain Sdel_1553 PF07670 Nucleoside recognition Sdel_1553 PF02421 Ferrous iron transport protein B Sdel_1554 PF04023 FeoA domain Sdel_1556 PF00005 ABC transporter Sdel_1557 PF00528 Binding-protein-dependent transport system inner membrane component Sdel_1559 PF07715 TonB-dependent Receptor Plug Domain Sdel_1559 PF00593 TonB dependent receptor Sdel_1561 PF00593 TonB dependent receptor Sdel_1561 PF07715 TonB-dependent Receptor Plug Domain Sdel_1564 PF00593 TonB dependent receptor Sdel_1564 PF07715 TonB-dependent Receptor Plug Domain Sdel_1568 PF02472 Biopolymer transport protein ExbD/TolR Sdel_1569 PF01618 MotA/TolQ/ExbB proton channel family Sdel_1570 PF07690 Major Facilitator Superfamily Sdel_1572 PF00664 ABC transporter transmembrane region Sdel_1572 PF00005 ABC transporter Sdel_1573 PF00664 ABC transporter transmembrane region Sdel_1573 PF00005 ABC transporter Sdel_1573 PF08021 Siderophore-interacting FAD-binding domain Sdel_1573 PF04954 Siderophore-interacting protein Sdel_1574 PF00593 TonB dependent receptor Sdel_1574 PF07715 TonB-dependent Receptor Plug Domain Sdel_1576 PF16177 Acetyl-coenzyme A synthetase N-terminus Sdel_1576 PF13193 AMP-binding enzyme C-terminal domain Sdel_1576 PF00501 AMP-binding enzyme Sdel_1577 PF00474 Sodium:solute symporter family Sdel_1578 PF04341 Protein of unknown function, DUF485 Sdel_1579 PF00486 Transcriptional regulatory protein, C terminal Sdel_1579 PF00072 Response regulator receiver domain Sdel_1580 PF00512 His Kinase A (phospho-acceptor) domain Sdel_1580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Sdel_1580 PF00672 HAMP domain Sdel_1580 PF16767 Sensor domain of alginate biosynthesis sensor protein KinB Sdel_1580 PF08448 PAS fold Sdel_1581 PF04371 Porphyromonas-type peptidyl-arginine deiminase Sdel_1582 PF01545 Cation efflux family Sdel_1582 PF16916 Dimerisation domain of Zinc Transporter Sdel_1583 PF02421 Ferrous iron transport protein B Sdel_1583 PF07664 Ferrous iron transport protein B C terminus Sdel_1583 PF07670 Nucleoside recognition Sdel_1584 PF04023 FeoA domain Sdel_1585 PF00795 Carbon-nitrogen hydrolase Sdel_1588 PF00293 NUDIX domain Sdel_1589 PF01544 CorA-like Mg2+ transporter protein Sdel_1590 PF01551 Peptidase family M23 Sdel_1590 PF01476 LysM domain Sdel_1590 PF08525 Opacity-associated protein A N-terminal motif Sdel_1592 PF01565 FAD binding domain Sdel_1592 PF02913 FAD linked oxidases, C-terminal domain Sdel_1593 PF03631 Virulence factor BrkB Sdel_1595 PF00772 DnaB-like helicase N terminal domain Sdel_1595 PF03796 DnaB-like helicase C terminal domain Sdel_1596 PF04551 GcpE protein Sdel_1597 PF18319 PriA DNA helicase Cys-rich region (CRR) domain Sdel_1597 PF18074 Primosomal protein N C-terminal domain Sdel_1597 PF17764 3′ DNA-binding domain (3′BD) Sdel_1597 PF00271 Helicase conserved C-terminal domain Sdel_1597 PF00270 DEAD/DEAH box helicase Sdel_1598 PF07963 Prokaryotic N-terminal methylation motif Sdel_1598 PF00114 Pilin (bacterial filament) Sdel_1599 PF07963 Prokaryotic N-terminal methylation motif Sdel_1599 PF00114 Pilin (bacterial filament) Sdel_1602 PF04851 Type III restriction enzyme, res subunit Sdel_1602 PF12344 Ultra-violet resistance protein B Sdel_1602 PF00271 Helicase conserved C-terminal domain Sdel_1602 PF17757 UvrB interaction domain Sdel_1602 PF02151 UvrB/uvrC motif Sdel_1603 PF13089 Polyphosphate kinase N-terminal domain Sdel_1603 PF17941 Polyphosphate kinase C-terminal domain 1 Sdel_1603 PF13090 Polyphosphate kinase C-terminal domain 2 Sdel_1603 PF02503 Polyphosphate kinase middle domain Sdel_1604 PF00132 Bacterial transferase hexapeptide (six repeats) Sdel_1605 PF11490 DNA polymerase III polC-type N-terminus II Sdel_1605 PF17657 Bacterial DNA polymerase III alpha subunit finger domain Sdel_1605 PF14579 Helix-hairpin-helix motif Sdel_1605 PF02811 PHP domain Sdel_1605 PF00929 Exonuclease Sdel_1605 PF01336 OB-fold nucleic acid binding domain Sdel_1605 PF07733 Bacterial DNA polymerase III alpha NTPase domain Sdel_1606 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase Sdel_1607 PF00834 Ribulose-phosphate 3 epimerase family Sdel_1608 PF00830 Ribosomal L28 family Sdel_1609 PF01960 ArgJ family Sdel_1612 PF13277 YmdB-like protein Sdel_1613 PF17757 UvrB interaction domain Sdel_1613 PF02559 CarD-like/TRCF domain Sdel_1613 PF00270 DEAD/DEAH box helicase Sdel_1613 PF03461 TRCF domain Sdel_1613 PF00271 Helicase conserved C-terminal domain Sdel_1615 PF01551 Peptidase family M23 Sdel_1615 PF04225 Opacity-associated protein A LysM-like domain Sdel_1616 PF08245 Mur ligase middle domain Sdel_1617 PF17151 Periplasmic sensor domain Sdel_1617 PF00990 Diguanylate cyclase, GGDEF domain Sdel_1619 PF13603 Leucyl-tRNA synthetase, Domain 2 Sdel_1619 PF00133 tRNA synthetases class I (I, L, M and V) Sdel_1619 PF09334 tRNA synthetases class I (M) Sdel_1620 PF07549 SecD/SecF GG Motif Sdel_1620 PF02355 Protein export membrane protein Sdel_1621 PF02355 Protein export membrane protein Sdel_1622 PF02699 Preprotein translocase subunit Sdel_1624 PF02773 S-adenosylmethionine synthetase, C-terminal domain Sdel_1624 PF02772 S-adenosylmethionine synthetase, central domain Sdel_1624 PF00438 S-adenosylmethionine synthetase, N-terminal domain Sdel_1625 PF03588 Leucyl/phenylalanyl-tRNA protein transferase Sdel_1626 PF07724 AAA domain (Cdc48 subfamily) Sdel_1626 PF00004 ATPase family associated with various cellular activities (AAA) Sdel_1626 PF10431 C-terminal, D2-small domain, of ClpB protein Sdel_1626 PF17871 AAA lid domain Sdel_1626 PF02861 Clp amino terminal domain, pathogenicity island component Sdel_1627 PF02617 ATP-dependent Clp protease adaptor protein ClpS Sdel_1629 PF01668 SmpB protein Sdel_1630 PF00288 GHMP kinases N terminal domain Sdel_1631 PF02599 Global regulator protein family Sdel_1632 PF01509 TruB family pseudouridylate synthase (N terminal domain) Sdel_1633 PF13361 UvrD-like helicase C-terminal domain Sdel_1633 PF00580 UvrD/REP helicase N-terminal domain Sdel_1634 PF03466 LysR substrate binding domain Sdel_1634 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Sdel_1638 PF00425 chorismate binding enzyme Sdel_1641 PF12833 Helix-turn-helix domain Sdel_1642 PF00392 Bacterial regulatory proteins, gntR family Sdel_1642 PF00155 Aminotransferase class I and II Sdel_1644 PF02801 Beta-ketoacyl synthase, C-terminal domain Sdel_1644 PF00109 Beta-ketoacyl synthase, N-terminal domain Sdel_1645 PF01245 Ribosomal protein L19 Sdel_1646 PF01746 tRNA (Guanine-1)-methyltransferase Sdel_1647 PF01782 RimM N-terminal domain Sdel_1649 PF00886 Ribosomal protein S16 Sdel_1650 PF00448 SRP54-type protein, GTPase domain Sdel_1650 PF02881 SRP54-type protein, helical bundle domain Sdel_1650 PF02978 Signal peptide binding domain Sdel_1651 PF00849 RNA pseudouridylate synthase Sdel_1652 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) Sdel_1652 PF02390 Putative methyltransferase Sdel_1654 PF01784 NIF3 (NGG1p interacting factor 3) Sdel_1655 PF02091 Glycyl-tRNA synthetase alpha subunit Sdel_1657 PF00731 AIR carboxylase Sdel_1660 PF02811 PHP domain Sdel_1661 PF00120 Glutamine synthetase, catalytic domain Sdel_1661 PF03951 Glutamine synthetase, beta-Grasp domain Sdel_1662 PF17092 Penicillin-binding protein OB-like domain Sdel_1662 PF00912 Transglycosylase Sdel_1662 PF00905 Penicillin binding protein transpeptidase domain Sdel_1663 PF00005 ABC transporter Sdel_1663 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Sdel_1664 PF00155 Aminotransferase class I and II Sdel_1665 PF02545 Maf-like protein Sdel_1667 PF01411 tRNA synthetases class II (A) Sdel_1667 PF02272 DHHA1 domain Sdel_1667 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain Sdel_1670 PF00762 Ferrochelatase Sdel_1671 PF00905 Penicillin binding protein transpeptidase domain Sdel_1671 PF03717 Penicillin-binding Protein dimerisation domain Sdel_1672 PF02049 Flagellar hook-basal body complex protein FliE Sdel_1673 PF00460 Flagella basal body rod protein Sdel_1673 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Sdel_1674 PF00460 Flagella basal body rod protein Sdel_1675 PF01098 Cell cycle protein Sdel_1676 PF04101 Glycosyltransferase family 28 C-terminal domain Sdel_1676 PF03033 Glycosyltransferase family 28 N-terminal domain Sdel_1678 PF10531 SLBB domain Sdel_1681 PF00117 Glutamine amidotransferase class-I Sdel_1682 PF00072 Response regulator receiver domain Sdel_1682 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) Sdel_1682 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Sdel_1682 PF00672 HAMP domain Sdel_1682 PF01627 Hpt domain Sdel_1682 PF00512 His Kinase A (phospho-acceptor) domain Sdel_1685 PF00860 Permease family Sdel_1686 PF04055 Radical SAM superfamily Sdel_1687 PF00291 Pyridoxal-phosphate dependent enzyme Sdel_1688 PF01966 HD domain Sdel_1688 PF08335 GlnD PII-uridylyltransferase Sdel_1688 PF01842 ACT domain Sdel_1688 PF01909 Nucleotidyltransferase domain Sdel_1689 PF01380 SIS domain Sdel_1696 PF12848 ABC transporter Sdel_1696 PF00005 ABC transporter Sdel_1697 PF00990 Diguanylate cyclase, GGDEF domain Sdel_1697 PF00563 EAL domain Sdel_1697 PF03707 Bacterial signalling protein N terminal repeat Sdel_1702 PF00899 ThiF family Sdel_1703 PF00990 Diguanylate cyclase, GGDEF domain Sdel_1703 PF00072 Response regulator receiver domain Sdel_1705 PF14602 Hexapeptide repeat of succinyl-transferase Sdel_1705 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle Sdel_1706 PF01883 Iron-sulfur cluster assembly protein Sdel_1706 PF10609 NUBPL iron-transfer P-loop NTPase Sdel_1707 PF02542 YgbB family Sdel_1707 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase Sdel_1709 PF01747 ATP-sulfurylase Sdel_1709 PF14306 PUA-like domain Sdel_1710 PF04608 Phosphatidylglycerophosphatase A Sdel_1711 PF04264 YceI-like domain Sdel_1712 PF01205 Uncharacterized protein family UPF0029 Sdel_1712 PF09186 Domain of unknown function (DUF1949) Sdel_1713 PF17912 MalK OB fold domain Sdel_1713 PF00005 ABC transporter Sdel_1716 PF08402 TOBE domain Sdel_1716 PF00005 ABC transporter Sdel_1717 PF00528 Binding-protein-dependent transport system inner membrane component Sdel_1720 PF07943 Penicillin-binding protein 5, C-terminal domain Sdel_1720 PF00768 D-alanyl-D-alanine carboxypeptidase Sdel_1721 PF09521 NgoPII restriction endonuclease Sdel_1722 PF00145 C-5 cytosine-specific DNA methylase Sdel_1723 PF14748 Pyrroline-5-carboxylate reductase dimerisation Sdel_1723 PF03807 NADP oxidoreductase coenzyme F420-dependent Sdel_1724 PF02687 FtsX-like permease family Sdel_1724 PF00005 ABC transporter Sdel_1724 PF12704 MacB-like periplasmic core domain Sdel_1725 PF00005 ABC transporter Sdel_1726 PF00529 HlyD membrane-fusion protein of T1SS Sdel_1726 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion Sdel_1727 PF02321 Outer membrane efflux protein Sdel_1730 PF05552 Conserved TM helix Sdel_1730 PF00924 Mechanosensitive ion channel Sdel_1734 PF01654 Cytochrome bd terminal oxidase subunit I Sdel_1735 PF02322 Cytochrome bd terminal oxidase subunit II Sdel_1737 PF00990 Diguanylate cyclase, GGDEF domain Sdel_1737 PF17158 Membrane-associated sensor, integral membrane domain Sdel_1739 PF00689 Cation transporting ATPase, C-terminus Sdel_1739 PF00690 Cation transporter/ATPase, N-terminus Sdel_1741 PF08212 Lipocalin-like domain Sdel_1746 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family Sdel_1747 PF01029 NusB family Sdel_1748 PF00885 6,7-dimethyl-8-ribityllumazine synthase Sdel_1749 PF12867 DinB superfamily Sdel_1749 PF03781 Sulfatase-modifying factor enzyme 1 Sdel_1750 PF00793 DAHP synthetase I family Sdel_1751 PF00892 EamA-like transporter family Sdel_1752 PF00924 Mechanosensitive ion channel Sdel_1753 PF01926 50S ribosome-binding GTPase Sdel_1753 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal Sdel_1754 PF01202 Shikimate kinase Sdel_1755 PF00579 tRNA synthetases class I (W and Y) Sdel_1756 PF02403 Seryl-tRNA synthetase N-terminal domain Sdel_1756 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) Sdel_1758 PF00682 HMGL-like Sdel_1758 PF08502 LeuA allosteric (dimerisation) domain Sdel_1759 PF01066 CDP-alcohol phosphatidyltransferase Sdel_1760 PF02666 Phosphatidylserine decarboxylase Sdel_1761 PF00004 ATPase family associated with various cellular activities (AAA) Sdel_1761 PF01434 Peptidase family M41 Sdel_1761 PF17862 AAA+ lid domain Sdel_1763 PF00072 Response regulator receiver domain Sdel_1764 PF00977 Histidine biosynthesis protein Sdel_1765 PF00117 Glutamine amidotransferase class-I Sdel_1767 PF02516 Oligosaccharyl transferase STT3 subunit Sdel_1767 PF18527 STT3/PglB C-terminal beta-barrel domain Sdel_1769 PF02719 Polysaccharide biosynthesis protein Sdel_1770 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase Sdel_1771 PF00953 Glycosyl transferase family 4 Sdel_1772 PF01370 NAD dependent epimerase/dehydratase family Sdel_1773 PF00535 Glycosyl transferase family 2 Sdel_1778 PF00535 Glycosyl transferase family 2 Sdel_1779 PF01531 Glycosyl transferase family 11 Sdel_1781 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family Sdel_1783 PF00132 Bacterial transferase hexapeptide (six repeats) Sdel_1784 PF05523 WxcM-like, C-terminal Sdel_1785 PF16363 GDP-mannose 4,6 dehydratase Sdel_1786 PF00483 Nucleotidyl transferase Sdel_1788 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family Sdel_1789 PF01370 NAD dependent epimerase/dehydratase family Sdel_1790 PF16363 GDP-mannose 4,6 dehydratase Sdel_1791 PF00483 Nucleotidyl transferase Sdel_1791 PF01050 Mannose-6-phosphate isomerase Sdel_1792 PF01370 NAD dependent epimerase/dehydratase family Sdel_1793 PF16363 GDP-mannose 4,6 dehydratase Sdel_1795 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain Sdel_1795 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain Sdel_1796 PF14743 DNA ligase OB-like domain Sdel_1796 PF01068 ATP dependent DNA ligase domain Sdel_1797 PF16363 GDP-mannose 4,6 dehydratase Sdel_1798 PF00483 Nucleotidyl transferase Sdel_1799 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain Sdel_1799 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III Sdel_1799 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II Sdel_1799 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I Sdel_1803 PF00535 Glycosyl transferase family 2 Sdel_1805 PF01075 Glycosyltransferase family 9 (heptosyltransferase) Sdel_1808 PF01075 Glycosyltransferase family 9 (heptosyltransferase) Sdel_1812 PF13580 SIS domain Sdel_1813 PF01467 Cytidylyltransferase-like Sdel_1813 PF00294 pfkB family carbohydrate kinase Sdel_1814 PF01370 NAD dependent epimerase/dehydratase family Sdel_1819 PF00403 Heavy-metal-associated domain Sdel_1820 PF00563 EAL domain Sdel_1820 PF00990 Diguanylate cyclase, GGDEF domain Sdel_1820 PF08448 PAS fold Sdel_1821 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Sdel_1821 PF00512 His Kinase A (phospho-acceptor) domain Sdel_1822 PF08534 Redoxin Sdel_1825 PF00677 Lumazine binding domain Sdel_1826 PF00672 HAMP domain Sdel_1826 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Sdel_1827 PF02626 Carboxyltransferase domain, subdomain A and B Sdel_1828 PF02682 Carboxyltransferase domain, subdomain C and D Sdel_1829 PF03746 LamB/YcsF family Sdel_1830 PF01134 Glucose inhibited division protein A Sdel_1830 PF13932 GidA associated domain Sdel_1831 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal Sdel_1831 PF00355 Rieske [2Fe-2S] domain Sdel_1832 PF00033 Cytochrome b/b6/petB Sdel_1832 PF00032 Cytochrome b(C-terminal)/b6/petD Sdel_1833 PF02167 Cytochrome C1 family Sdel_1834 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit Sdel_1835 PF02801 Beta-ketoacyl synthase, C-terminal domain Sdel_1835 PF00109 Beta-ketoacyl synthase, N-terminal domain Sdel_1836 PF00550 Phosphopantetheine attachment site Sdel_1838 PF06415 BPG-independent PGAM N-terminus (iPGM_N) Sdel_1838 PF01676 Metalloenzyme superfamily Sdel_1839 PF00953 Glycosyl transferase family 4 Sdel_1839 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 Sdel_1840 PF08245 Mur ligase middle domain Sdel_1841 PF17862 AAA+ lid domain Sdel_1841 PF00004 ATPase family associated with various cellular activities (AAA) Sdel_1841 PF06480 FtsH Extracellular Sdel_1841 PF01434 Peptidase family M41 Sdel_1842 PF00563 EAL domain Sdel_1842 PF12792 CSS motif domain associated with EAL Sdel_1846 PF03649 Uncharacterised protein family (UPF0014) Sdel_1847 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain Sdel_1847 PF00289 Biotin carboxylase, N-terminal domain Sdel_1847 PF02785 Biotin carboxylase C-terminal domain Sdel_1850 PF01384 Phosphate transporter family Sdel_1851 PF00270 DEAD/DEAH box helicase Sdel_1851 PF00271 Helicase conserved C-terminal domain Sdel_1852 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 Sdel_1854 PF12729 Four helix bundle sensory module for signal transduction Sdel_1854 PF00672 HAMP domain Sdel_1854 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Sdel_1856 PF00005 ABC transporter Sdel_1857 PF00528 Binding-protein-dependent transport system inner membrane component Sdel_1858 PF00528 Binding-protein-dependent transport system inner membrane component Sdel_1859 PF12849 PBP superfamily domain Sdel_1860 PF12729 Four helix bundle sensory module for signal transduction Sdel_1860 PF00672 HAMP domain Sdel_1860 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Sdel_1861 PF13247 4Fe-4S dicluster domain Sdel_1862 PF00361 Proton-conducting membrane transporter Sdel_1863 PF00146 NADH dehydrogenase Sdel_1864 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L Sdel_1865 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus Sdel_1865 PF00361 Proton-conducting membrane transporter Sdel_1866 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit Sdel_1866 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit Sdel_1866 PF00374 Nickel-dependent hydrogenase Sdel_1868 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit Sdel_1872 PF01895 PhoU domain Sdel_1873 PF00486 Transcriptional regulatory protein, C terminal Sdel_1873 PF00072 Response regulator receiver domain Sdel_1874 PF00512 His Kinase A (phospho-acceptor) domain Sdel_1874 PF18698 Histidine kinase sensor domain Sdel_1874 PF00672 HAMP domain Sdel_1874 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Sdel_1875 PF03061 Thioesterase superfamily Sdel_1876 PF00989 PAS fold Sdel_1876 PF00512 His Kinase A (phospho-acceptor) domain Sdel_1876 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Sdel_1877 PF06508 Queuosine biosynthesis protein QueC Sdel_1878 PF04055 Radical SAM superfamily Sdel_1883 PF02562 PhoH-like protein Sdel_1884 PF02321 Outer membrane efflux protein Sdel_1885 PF00873 AcrB/AcrD/AcrF family Sdel_1886 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion Sdel_1886 PF00529 HlyD membrane-fusion protein of T1SS Sdel_1889 PF00375 Sodium:dicarboxylate symporter family Sdel_1890 PF02664 S-Ribosylhomocysteinase (LuxS) Sdel_1894 PF02635 DsrE/DsrF-like family Sdel_1897 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain Sdel_1897 PF02777 Iron/manganese superoxide dismutases, C-terminal domain Sdel_1898 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase Sdel_1898 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg Sdel_1898 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Sdel_1898 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II Sdel_1898 PF10371 Domain of unknown function Sdel_1899 PF13419 Haloacid dehalogenase-like hydrolase Sdel_1901 PF00691 OmpA family Sdel_1901 PF05736 OprF membrane domain Sdel_1902 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Sdel_1905 PF02222 ATP-grasp domain Sdel_1908 PF00380 Ribosomal protein S9/S16 Sdel_1909 PF00572 Ribosomal protein L13 Sdel_1910 PF12705 PD-(D/E)XK nuclease superfamily Sdel_1910 PF13361 UvrD-like helicase C-terminal domain Sdel_1910 PF00580 UvrD/REP helicase N-terminal domain Sdel_1916 PF13442 Cytochrome C oxidase, cbb3-type, subunit III Sdel_1916 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP Sdel_1919 PF00115 Cytochrome C and Quinol oxidase polypeptide I Sdel_1920 PF01627 Hpt domain Sdel_1920 PF00072 Response regulator receiver domain Sdel_1920 PF00486 Transcriptional regulatory protein, C terminal Sdel_1921 PF08447 PAS fold Sdel_1921 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Sdel_1923 PF00117 Glutamine amidotransferase class-I Sdel_1923 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain Sdel_1927 PF00709 Adenylosuccinate synthetase Sdel_1928 PF13393 Histidyl-tRNA synthetase Sdel_1929 PF00266 Aminotransferase class-V Sdel_1930 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Sdel_1930 PF00672 HAMP domain Sdel_1930 PF02743 Cache domain Sdel_1931 PF02743 Cache domain Sdel_1931 PF00672 HAMP domain Sdel_1931 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Sdel_1932 PF13419 Haloacid dehalogenase-like hydrolase Sdel_1933 PF02779 Transketolase, pyrimidine binding domain Sdel_1933 PF00456 Transketolase, thiamine diphosphate binding domain Sdel_1933 PF02780 Transketolase, C-terminal domain Sdel_1934 PF00348 Polyprenyl synthetase Sdel_1936 PF02575 YbaB/EbfC DNA-binding family Sdel_1937 PF02261 Aspartate decarboxylase Sdel_1938 PF02875 Mur ligase family, glutamate ligase domain Sdel_1938 PF08245 Mur ligase middle domain Sdel_1941 PF01196 Ribosomal protein L17 Sdel_1942 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain Sdel_1942 PF01000 RNA polymerase Rpb3/RpoA insert domain Sdel_1942 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain Sdel_1943 PF01479 S4 domain Sdel_1943 PF00163 Ribosomal protein S4/S9 N-terminal domain Sdel_1944 PF00411 Ribosomal protein S11 Sdel_1945 PF00416 Ribosomal protein S13/S18 Sdel_1946 PF00444 Ribosomal protein L36 Sdel_1947 PF01176 Translation initiation factor 1A / IF-1 Sdel_1948 PF00557 Metallopeptidase family M24 Sdel_1949 PF00344 SecY translocase Sdel_1950 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A Sdel_1951 PF00333 Ribosomal protein S5, N-terminal domain Sdel_1951 PF03719 Ribosomal protein S5, C-terminal domain Sdel_1952 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast Sdel_1953 PF00347 Ribosomal protein L6 Sdel_1954 PF00410 Ribosomal protein S8 Sdel_1955 PF00253 Ribosomal protein S14p/S29e Sdel_1956 PF00673 ribosomal L5P family C-terminus Sdel_1956 PF00281 Ribosomal protein L5 Sdel_1957 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 Sdel_1957 PF00467 KOW motif Sdel_1958 PF00238 Ribosomal protein L14p/L23e Sdel_1959 PF00366 Ribosomal protein S17 Sdel_1960 PF00831 Ribosomal L29 protein Sdel_1961 PF00252 Ribosomal protein L16p/L10e Sdel_1962 PF07650 KH domain Sdel_1962 PF00189 Ribosomal protein S3, C-terminal domain Sdel_1963 PF00237 Ribosomal protein L22p/L17e Sdel_1964 PF00203 Ribosomal protein S19 Sdel_1965 PF03947 Ribosomal Proteins L2, C-terminal domain Sdel_1965 PF00181 Ribosomal Proteins L2, RNA binding domain Sdel_1966 PF00276 Ribosomal protein L23 Sdel_1967 PF00573 Ribosomal protein L4/L1 family Sdel_1968 PF00297 Ribosomal protein L3 Sdel_1969 PF00338 Ribosomal protein S10p/S20e Sdel_1971 PF01351 Ribonuclease HII Sdel_1973 PF02421 Ferrous iron transport protein B Sdel_1973 PF07664 Ferrous iron transport protein B C terminus Sdel_1973 PF07670 Nucleoside recognition Sdel_1974 PF01264 Chorismate synthase Sdel_1975 PF00035 Double-stranded RNA binding motif Sdel_1975 PF14622 Ribonuclease-III-like Sdel_1976 PF00075 RNase H Sdel_1978 PF08275 DNA primase catalytic core, N-terminal domain Sdel_1978 PF01807 CHC2 zinc finger Sdel_1978 PF16730 DnaG-primase C-terminal, helicase-binding domain Sdel_1978 PF13662 Toprim domain Sdel_1980 PF00072 Response regulator receiver domain Sdel_1982 PF00563 EAL domain Sdel_1982 PF03707 Bacterial signalling protein N terminal repeat Sdel_1982 PF00990 Diguanylate cyclase, GGDEF domain Sdel_1983 PF00486 Transcriptional regulatory protein, C terminal Sdel_1983 PF00072 Response regulator receiver domain Sdel_1984 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Sdel_1984 PF00512 His Kinase A (phospho-acceptor) domain Sdel_1985 PF00072 Response regulator receiver domain Sdel_1985 PF01339 CheB methylesterase Sdel_1986 PF03975 CheD chemotactic sensory transduction Sdel_1987 PF00512 His Kinase A (phospho-acceptor) domain Sdel_1987 PF00989 PAS fold Sdel_1987 PF00672 HAMP domain Sdel_1987 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Sdel_1987 PF18698 Histidine kinase sensor domain Sdel_1988 PF03705 CheR methyltransferase, all-alpha domain Sdel_1988 PF01739 CheR methyltransferase, SAM binding domain Sdel_1989 PF01627 Hpt domain Sdel_1989 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Sdel_1989 PF01584 CheW-like domain Sdel_1989 PF09078 CheY binding Sdel_1989 PF02895 Signal transducing histidine kinase, homodimeric domain Sdel_1991 PF02203 Tar ligand binding domain homologue Sdel_1991 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Sdel_1991 PF00672 HAMP domain Sdel_1992 PF01584 CheW-like domain Sdel_1995 PF12167 Arm DNA-binding domain Sdel_1995 PF00589 Phage integrase family Sdel_1998 PF01695 IstB-like ATP binding protein Sdel_1999 PF02796 Helix-turn-helix domain of resolvase Sdel_1999 PF00665 Integrase core domain Sdel_2004 PF00486 Transcriptional regulatory protein, C terminal Sdel_2004 PF00072 Response regulator receiver domain Sdel_2005 PF00512 His Kinase A (phospho-acceptor) domain Sdel_2005 PF00989 PAS fold Sdel_2005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Sdel_2006 PF17763 Glutaminase/Asparaginase C-terminal domain Sdel_2006 PF00710 Asparaginase, N-terminal Sdel_2007 PF03605 Anaerobic c4-dicarboxylate membrane transporter Sdel_2008 PF00206 Lyase Sdel_2008 PF10415 Fumarase C C-terminus Sdel_2009 PF00206 Lyase Sdel_2009 PF10415 Fumarase C C-terminus Sdel_2010 PF00106 short chain dehydrogenase Sdel_2012 PF00145 C-5 cytosine-specific DNA methylase Sdel_2019 PF00005 ABC transporter Sdel_2020 PF02687 FtsX-like permease family Sdel_2020 PF12704 MacB-like periplasmic core domain Sdel_2023 PF01869 BadF/BadG/BcrA/BcrD ATPase family Sdel_2024 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component Sdel_2026 PF13426 PAS domain Sdel_2026 PF08447 PAS fold Sdel_2026 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Sdel_2027 PF00072 Response regulator receiver domain Sdel_2027 PF08769 Sporulation initiation factor Spo0A C terminal Sdel_2028 PF00512 His Kinase A (phospho-acceptor) domain Sdel_2028 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Sdel_2030 PF02001 Protein of unknown function DUF134 Sdel_2032 PF12792 CSS motif domain associated with EAL Sdel_2032 PF00563 EAL domain Sdel_2033 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Sdel_2034 PF00528 Binding-protein-dependent transport system inner membrane component Sdel_2035 PF12911 N-terminal TM domain of oligopeptide transport permease C Sdel_2035 PF00528 Binding-protein-dependent transport system inner membrane component Sdel_2037 PF00884 Sulfatase Sdel_2037 PF08019 Phosphoethanolamine transferase EptA/EptB Sdel_2038 PF00512 His Kinase A (phospho-acceptor) domain Sdel_2038 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Sdel_2038 PF18719 ArlS sensor domain Sdel_2039 PF00072 Response regulator receiver domain Sdel_2039 PF00486 Transcriptional regulatory protein, C terminal Sdel_2041 PF01810 LysE type translocator Sdel_2042 PF01370 NAD dependent epimerase/dehydratase family Sdel_2042 PF08338 Domain of unknown function (DUF1731) Sdel_2043 PF01810 LysE type translocator Sdel_2045 PF00258 Flavodoxin Sdel_2047 PF03824 High-affinity nickel-transport protein Sdel_2053 PF02769 AIR synthase related protein, C-terminal domain Sdel_2053 PF00586 AIR synthase related protein, N-terminal domain Sdel_2054 PF01206 Sulfurtransferase TusA Sdel_2057 PF00005 ABC transporter Sdel_2057 PF08402 TOBE domain Sdel_2060 PF02634 FdhD/NarQ family Sdel_2063 PF00005 ABC transporter Sdel_2066 PF02472 Biopolymer transport protein ExbD/TolR Sdel_2067 PF01618 MotA/TolQ/ExbB proton channel family Sdel_2068 PF03459 TOBE domain Sdel_2068 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Sdel_2069 PF01497 Periplasmic binding protein Sdel_2073 PF13247 4Fe-4S dicluster domain Sdel_2074 PF12838 4Fe-4S dicluster domain Sdel_2074 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region Sdel_2074 PF04879 Molybdopterin oxidoreductase Fe4S4 domain Sdel_2074 PF00384 Molybdopterin oxidoreductase Sdel_2074 PF01568 Molydopterin dinucleotide binding domain Sdel_2075 PF04879 Molybdopterin oxidoreductase Fe4S4 domain Sdel_2075 PF00384 Molybdopterin oxidoreductase Sdel_2075 PF01568 Molydopterin dinucleotide binding domain Sdel_2080 PF13493 Domain of unknown function (DUF4118) Sdel_2080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Sdel_2080 PF02702 Osmosensitive K+ channel His kinase sensor domain Sdel_2080 PF00512 His Kinase A (phospho-acceptor) domain Sdel_2081 PF00486 Transcriptional regulatory protein, C terminal Sdel_2081 PF00072 Response regulator receiver domain Sdel_2082 PF03841 L-seryl-tRNA selenium transferase Sdel_2083 PF09107 Elongation factor SelB, winged helix Sdel_2083 PF09106 Elongation factor SelB, winged helix Sdel_2083 PF09105 Elongation factor SelB, winged helix Sdel_2083 PF03144 Elongation factor Tu domain 2 Sdel_2083 PF00009 Elongation factor Tu GTP binding domain Sdel_2084 PF00890 FAD binding domain Sdel_2084 PF04205 FMN-binding domain Sdel_2089 PF04205 FMN-binding domain Sdel_2089 PF00890 FAD binding domain Sdel_2094 PF00072 Response regulator receiver domain Sdel_2094 PF00486 Transcriptional regulatory protein, C terminal Sdel_2095 PF00672 HAMP domain Sdel_2095 PF00512 His Kinase A (phospho-acceptor) domain Sdel_2095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Sdel_2097 PF07977 FabA-like domain Sdel_2100 PF00221 Aromatic amino acid lyase Sdel_2107 PF00005 ABC transporter Sdel_2110 PF00109 Beta-ketoacyl synthase, N-terminal domain Sdel_2110 PF02801 Beta-ketoacyl synthase, C-terminal domain Sdel_2120 PF00561 alpha/beta hydrolase fold Sdel_2120 PF08386 TAP-like protein Sdel_2123 PF02801 Beta-ketoacyl synthase, C-terminal domain Sdel_2123 PF00109 Beta-ketoacyl synthase, N-terminal domain Sdel_2124 PF00550 Phosphopantetheine attachment site Sdel_2125 PF00270 DEAD/DEAH box helicase Sdel_2125 PF00271 Helicase conserved C-terminal domain Sdel_2127 PF02411 MerT mercuric transport protein Sdel_2128 PF01841 Transglutaminase-like superfamily Sdel_2129 PF02086 D12 class N6 adenine-specific DNA methyltransferase Sdel_2130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Sdel_2130 PF00512 His Kinase A (phospho-acceptor) domain Sdel_2130 PF00989 PAS fold Sdel_2131 PF00486 Transcriptional regulatory protein, C terminal Sdel_2131 PF00072 Response regulator receiver domain Sdel_2135 PF02492 CobW/HypB/UreG, nucleotide-binding domain Sdel_2135 PF07683 Cobalamin synthesis protein cobW C-terminal domain Sdel_2138 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Sdel_2138 PF00512 His Kinase A (phospho-acceptor) domain Sdel_2138 PF00989 PAS fold Sdel_2139 PF00486 Transcriptional regulatory protein, C terminal Sdel_2139 PF00072 Response regulator receiver domain Sdel_2140 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain Sdel_2141 PF02743 Cache domain Sdel_2141 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Sdel_2141 PF00672 HAMP domain Sdel_2142 PF16653 Saccharopine dehydrogenase C-terminal domain Sdel_2142 PF03435 Saccharopine dehydrogenase NADP binding domain Sdel_2143 PF01725 Ham1 family Sdel_2144 PF06725 3D domain Sdel_2144 PF03562 MltA specific insert domain Sdel_2146 PF07690 Major Facilitator Superfamily Sdel_2150 PF03453 MoeA N-terminal region (domain I and II) Sdel_2150 PF03454 MoeA C-terminal region (domain IV) Sdel_2150 PF00994 Probable molybdopterin binding domain Sdel_2151 PF02391 MoaE protein Sdel_2153 PF01106 NifU-like domain Sdel_2153 PF04324 BFD-like [2Fe-2S] binding domain Sdel_2153 PF01592 NifU-like N terminal domain Sdel_2154 PF00266 Aminotransferase class-V Sdel_2155 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Sdel_2155 PF18269 T3SS EscN ATPase C-terminal domain Sdel_2156 PF01227 GTP cyclohydrolase I Sdel_2157 PF05697 Bacterial trigger factor protein (TF) Sdel_2157 PF05698 Bacterial trigger factor protein (TF) C-terminus Sdel_2157 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase Sdel_2158 PF00574 Clp protease Sdel_2160 PF01327 Polypeptide deformylase Sdel_2161 PF01078 Magnesium chelatase, subunit ChlI Sdel_2161 PF13335 Magnesium chelatase, subunit ChlI C-terminal Sdel_2162 PF03853 YjeF-related protein N-terminus Sdel_2162 PF01256 Carbohydrate kinase Sdel_2163 PF00551 Formyl transferase Sdel_2164 PF05690 Thiazole biosynthesis protein ThiG Sdel_2168 PF00520 Ion transport protein Sdel_2168 PF00027 Cyclic nucleotide-binding domain Sdel_2172 PF00005 ABC transporter Sdel_2172 PF02687 FtsX-like permease family Sdel_2172 PF12704 MacB-like periplasmic core domain Sdel_2175 PF00892 EamA-like transporter family Sdel_2176 PF00563 EAL domain Sdel_2176 PF01590 GAF domain Sdel_2176 PF00990 Diguanylate cyclase, GGDEF domain Sdel_2176 PF00360 Phytochrome region Sdel_2179 PF00990 Diguanylate cyclase, GGDEF domain Sdel_2184 PF01451 Low molecular weight phosphotyrosine protein phosphatase Sdel_2187 PF03741 Integral membrane protein TerC family Sdel_2188 PF02621 Menaquinone biosynthesis Sdel_2189 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase Sdel_2189 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain Sdel_2190 PF00583 Acetyltransferase (GNAT) family Sdel_2191 PF01554 MatE Sdel_2193 PF03707 Bacterial signalling protein N terminal repeat Sdel_2193 PF00990 Diguanylate cyclase, GGDEF domain Sdel_2193 PF00563 EAL domain Sdel_2195 PF00390 Malic enzyme, N-terminal domain Sdel_2195 PF03949 Malic enzyme, NAD binding domain Sdel_2195 PF01515 Phosphate acetyl/butaryl transferase Sdel_2196 PF00749 tRNA synthetases class I (E and Q), catalytic domain Sdel_2197 PF00639 PPIC-type PPIASE domain Sdel_2197 PF09312 SurA N-terminal domain Sdel_2198 PF00289 Biotin carboxylase, N-terminal domain Sdel_2198 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain Sdel_2198 PF02785 Biotin carboxylase C-terminal domain Sdel_2199 PF00364 Biotin-requiring enzyme Sdel_2200 PF00692 dUTPase Sdel_2204 PF17785 PUA-like domain Sdel_2204 PF10672 S-adenosylmethionine-dependent methyltransferase Sdel_2205 PF12146 Serine aminopeptidase, S33 Sdel_2207 PF00669 Bacterial flagellin N-terminal helical region Sdel_2207 PF00700 Bacterial flagellin C-terminal helical region Sdel_2207 PF07196 Flagellin hook IN motif Sdel_2208 PF02719 Polysaccharide biosynthesis protein Sdel_2209 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family Sdel_2210 PF02348 Cytidylyltransferase Sdel_2212 PF13302 Acetyltransferase (GNAT) domain Sdel_2213 PF03102 NeuB family Sdel_2213 PF08666 SAF domain Sdel_2216 PF13537 Glutamine amidotransferase domain Sdel_2216 PF00733 Asparagine synthase Sdel_2217 PF00534 Glycosyl transferases group 1 Sdel_2217 PF13579 Glycosyl transferase 4-like domain Sdel_2218 PF08241 Methyltransferase domain Sdel_2220 PF08241 Methyltransferase domain Sdel_2222 PF16363 GDP-mannose 4,6 dehydratase Sdel_2224 PF04055 Radical SAM superfamily Sdel_2224 PF06463 Molybdenum Cofactor Synthesis C Sdel_2229 PF00669 Bacterial flagellin N-terminal helical region Sdel_2229 PF07196 Flagellin hook IN motif Sdel_2229 PF00700 Bacterial flagellin C-terminal helical region Sdel_2230 PF01131 DNA topoisomerase Sdel_2230 PF01751 Toprim domain Sdel_2230 PF01396 Topoisomerase DNA binding C4 zinc finger Sdel_2231 PF06968 Biotin and Thiamin Synthesis associated domain Sdel_2231 PF04055 Radical SAM superfamily Sdel_2232 PF00285 Citrate synthase, C-terminal domain Sdel_2235 PF00113 Enolase, C-terminal TIM barrel domain Sdel_2235 PF03952 Enolase, N-terminal domain Sdel_2236 PF00154 recA bacterial DNA recombination protein Sdel_2237 PF02621 Menaquinone biosynthesis Sdel_2238 PF01313 Bacterial export proteins, family 3 Sdel_2239 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain Sdel_2240 PF00814 Glycoprotease family Sdel_2242 PF00563 EAL domain Sdel_2242 PF03707 Bacterial signalling protein N terminal repeat Sdel_2242 PF00990 Diguanylate cyclase, GGDEF domain Sdel_2246 PF00149 Calcineurin-like phosphoesterase Sdel_2247 PF01235 Sodium:alanine symporter family Sdel_2248 PF00860 Permease family Sdel_2249 PF13288 DXP reductoisomerase C-terminal domain Sdel_2249 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase Sdel_2249 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain Sdel_2253 PF02595 Glycerate kinase family Sdel_2254 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain Sdel_2254 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain Sdel_2256 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Sdel_2256 PF00672 HAMP domain Sdel_2256 PF12729 Four helix bundle sensory module for signal transduction Sdel_2257 PF10417 C-terminal domain of 1-Cys peroxiredoxin Sdel_2257 PF00578 AhpC/TSA family Sdel_2259 PF00330 Aconitase family (aconitate hydratase) Sdel_2260 PF12804 MobA-like NTP transferase domain Sdel_2261 PF08495 FIST N domain Sdel_2261 PF00563 EAL domain Sdel_2261 PF10442 FIST C domain Sdel_2261 PF00990 Diguanylate cyclase, GGDEF domain Sdel_2263 PF02253 Phospholipase A1 Sdel_2264 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Sdel_2265 PF01967 MoaC family Sdel_2270 PF01027 Inhibitor of apoptosis-promoting Bax1 Sdel_2275 PF13247 4Fe-4S dicluster domain Sdel_2276 PF01568 Molydopterin dinucleotide binding domain Sdel_2276 PF04879 Molybdopterin oxidoreductase Fe4S4 domain Sdel_2276 PF00384 Molybdopterin oxidoreductase Sdel_2278 PF03840 Preprotein translocase SecG subunit Sdel_2280 PF01765 Ribosome recycling factor Sdel_2281 PF00156 Phosphoribosyl transferase domain Sdel_2286 PF04011 LemA family Sdel_2289 PF13861 FlgD Tudor-like domain Sdel_2289 PF13860 FlgD Ig-like domain Sdel_2289 PF03963 Flagellar hook capping protein - N-terminal region Sdel_2290 PF07559 Flagellar basal body protein FlaE Sdel_2290 PF07196 Flagellin hook IN motif Sdel_2290 PF00460 Flagella basal body rod protein Sdel_2290 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Sdel_2291 PF07196 Flagellin hook IN motif Sdel_2291 PF00460 Flagella basal body rod protein Sdel_2291 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Sdel_2291 PF07559 Flagellar basal body protein FlaE