locus-tag	class	description
Sdel_0001	COG1351	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NAD(P)H and FADH(2) as the reductant
Sdel_0002	COG0817	Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
Sdel_0004	COG0592	DNA-directed DNA polymerase activity
Sdel_0005	COG0187	DNA topoisomerase II activity
Sdel_0006	COG5001	Diguanylate cyclase
Sdel_0007	COG0780	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
Sdel_0009	COG0692	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
Sdel_0010	COG1194	a g-specific adenine glycosylase
Sdel_0012	COG2814	Major facilitator Superfamily
Sdel_0016	COG0840	transmembrane signaling receptor activity
Sdel_0020	COG0747	negative chemotaxis
Sdel_0021	COG0601	transmembrane transport
Sdel_0022	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
Sdel_0024	COG1124	(ABC) transporter
Sdel_0025	COG0534	Mate efflux family protein
Sdel_0030	COG2258	MOSC domain
Sdel_0033	COG1355	regulation of microtubule-based process
Sdel_0036	COG0697	spore germination
Sdel_0039	COG3383	formate dehydrogenase (NAD+) activity
Sdel_0041	COG0129	dihydroxy-acid dehydratase activity
Sdel_0042	COG2095	MarC family integral membrane protein
Sdel_0045	COG0504	CTP synthase activity
Sdel_0047	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
Sdel_0048	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
Sdel_0049	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
Sdel_0053	COG1794	racemase activity, acting on amino acids and derivatives
Sdel_0054	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
Sdel_0055	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
Sdel_0056	COG0564	pseudouridine synthase activity
Sdel_0057	COG0179	Fumarylacetoacetate (FAA) hydrolase
Sdel_0059	COG0820	rRNA (adenine-C2-)-methyltransferase activity
Sdel_0061	COG0107	imidazoleglycerol-phosphate synthase activity
Sdel_0063	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
Sdel_0064	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
Sdel_0064	COG0517	IMP dehydrogenase activity
Sdel_0065	COG1187	pseudouridine synthase activity
Sdel_0066	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
Sdel_0066	COG2110	phosphatase homologous to the C-terminal domain of histone macroH2A1
Sdel_0068	COG2257	FlhB HrpN YscU SpaS Family
Sdel_0070	COG0150	phosphoribosylformylglycinamidine cyclo-ligase activity
Sdel_0071	COG0237	dephospho-CoA kinase activity
Sdel_0072	COG0253	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
Sdel_0074	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
Sdel_0078	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
Sdel_0079	COG0597	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
Sdel_0080	COG1368	sulfuric ester hydrolase activity
Sdel_0081	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
Sdel_0082	COG0290	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
Sdel_0083	COG0291	Belongs to the bacterial ribosomal protein bL35 family
Sdel_0084	COG0292	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
Sdel_0085	COG0348	domain, Protein
Sdel_0090	COG0754	glutathionylspermidine amidase activity
Sdel_0091	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
Sdel_0094	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
Sdel_0096	COG5002	protein histidine kinase activity
Sdel_0097	COG0745	RESPONSE REGULATOR receiver
Sdel_0101	COG1127	ABC transporter
Sdel_0102	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
Sdel_0103	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
Sdel_0105	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
Sdel_0112	COG0840	transmembrane signaling receptor activity
Sdel_0113	COG0840	transmembrane signaling receptor activity
Sdel_0114	COG2240	Pyridoxal kinase involved in the salvage pathway of pyridoxal 5'-phosphate (PLP). Catalyzes the phosphorylation of pyridoxal to PLP
Sdel_0117	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
Sdel_0118	COG0723	plastoquinol--plastocyanin reductase activity
Sdel_0119	COG0667	Aldo Keto reductase
Sdel_0120	COG0745	RESPONSE REGULATOR receiver
Sdel_0123	COG0765	amino acid transport
Sdel_0129	COG1108	ABC-type Mn2 Zn2 transport systems permease components
Sdel_0130	COG1121	(ABC) transporter
Sdel_0134	COG0648	Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin
Sdel_0136	COG0318	PFAM AMP-dependent synthetase and ligase
Sdel_0138	COG0838	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
Sdel_0139	COG0377	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
Sdel_0140	COG0852	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
Sdel_0141	COG0649	NAD binding
Sdel_0145	COG1005	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone
Sdel_0146	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
Sdel_0147	COG0839	Belongs to the complex I subunit 6 family
Sdel_0148	COG0713	ATP synthesis coupled electron transport
Sdel_0149	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
Sdel_0151	COG1007	ATP synthesis coupled electron transport
Sdel_0153	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
Sdel_0157	COG0840	transmembrane signaling receptor activity
Sdel_0159	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
Sdel_0160	COG0303	'Molybdopterin
Sdel_0162	COG1385	rRNA (uridine-N3-)-methyltransferase activity
Sdel_0163	COG0254	rRNA binding
Sdel_0164	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
Sdel_0168	COG0436	Aminotransferase
Sdel_0169	COG0460	homoserine dehydrogenase
Sdel_0170	COG0792	nuclease activity
Sdel_0171	COG3118	belongs to the thioredoxin family
Sdel_0172	COG0492	ferredoxin-NADP+ reductase activity
Sdel_0173	COG0289	4-hydroxy-tetrahydrodipicolinate reductase
Sdel_0174	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
Sdel_0175	COG1242	4 iron, 4 sulfur cluster binding
Sdel_0178	COG0140	phosphoribosyl-ATP diphosphatase activity
Sdel_0178	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
Sdel_0181	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
Sdel_0183	COG1636	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
Sdel_0184	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
Sdel_0185	COG1043	involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
Sdel_0186	COG1219	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
Sdel_0189	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
Sdel_0195	COG0489	protein tyrosine kinase activity
Sdel_0197	COG1342	Belongs to the UPF0251 family
Sdel_0198	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
Sdel_0199	COG0496	Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates
Sdel_0200	COG0763	Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
Sdel_0201	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
Sdel_0202	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
Sdel_0203	COG2908	Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
Sdel_0204	COG0835	chemotaxis
Sdel_0204	COG0784	Response regulator, receiver
Sdel_0205	COG2198	Histidine kinase
Sdel_0205	COG0643	Histidine kinase
Sdel_0206	COG0835	chemotaxis
Sdel_0208	COG0560	Phosphoserine phosphatase
Sdel_0211	COG1825	This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
Sdel_0212	COG0193	aminoacyl-tRNA hydrolase activity
Sdel_0214	COG0019	diaminopimelate decarboxylase activity
Sdel_0217	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
Sdel_0219	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
Sdel_0221	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
Sdel_0223	COG0450	alkyl hydroperoxide reductase
Sdel_0225	COG0105	UTP biosynthetic process
Sdel_0227	COG0333	Belongs to the bacterial ribosomal protein bL32 family
Sdel_0228	COG0416	fatty acid biosynthetic process
Sdel_0229	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
Sdel_0230	COG0287	Prephenate dehydrogenase
Sdel_0231	COG4775	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
Sdel_0233	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
Sdel_0235	COG0745	RESPONSE REGULATOR receiver
Sdel_0237	COG0344	acyl-phosphate glycerol-3-phosphate acyltransferase activity
Sdel_0239	COG0157	Belongs to the NadC ModD family
Sdel_0240	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
Sdel_0243	COG0850	regulation of cytokinetic process
Sdel_0244	COG0774	UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity
Sdel_0246	COG0083	homoserine kinase activity
Sdel_0248	COG0532	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
Sdel_0250	COG0779	Required for maturation of 30S ribosomal subunits
Sdel_0251	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
Sdel_0251	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
Sdel_0254	COG5001	Diguanylate cyclase
Sdel_0255	COG1278	Cold shock
Sdel_0256	COG5002	protein histidine kinase activity
Sdel_0257	COG0745	RESPONSE REGULATOR receiver
Sdel_0259	COG3258	Cytochrome c
Sdel_0261	COG1242	4 iron, 4 sulfur cluster binding
Sdel_0262	COG0840	transmembrane signaling receptor activity
Sdel_0263	COG0859	PFAM glycosyl transferase family 9
Sdel_0264	COG0110	maltose O-acetyltransferase activity
Sdel_0265	COG0243	molybdopterin cofactor binding
Sdel_0266	COG0437	4 iron, 4 sulfur cluster binding
Sdel_0267	COG3301	Polysulphide reductase, NrfD
Sdel_0268	COG5002	protein histidine kinase activity
Sdel_0268	COG5001	Diguanylate cyclase
Sdel_0270	COG0437	4 iron, 4 sulfur cluster binding
Sdel_0271	COG3301	Polysulphide reductase, NrfD
Sdel_0272	COG0745	RESPONSE REGULATOR receiver
Sdel_0273	COG5002	protein histidine kinase activity
Sdel_0275	COG0635	Involved in the biosynthesis of porphyrin-containing compound
Sdel_0276	COG2814	Major facilitator Superfamily
Sdel_0278	COG1227	inorganic diphosphatase activity
Sdel_0281	COG1570	exodeoxyribonuclease VII activity
Sdel_0282	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
Sdel_0283	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
Sdel_0284	COG0583	DNA-binding transcription factor activity
Sdel_0285	COG2855	membrane
Sdel_0287	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
Sdel_0288	COG0616	signal peptide processing
Sdel_0289	COG0402	S-adenosylhomocysteine deaminase activity
Sdel_0290	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
Sdel_0291	COG0006	proline dipeptidase activity
Sdel_0292	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
Sdel_0293	COG1419	protein localization to endoplasmic reticulum
Sdel_0294	COG0455	bacterial-type flagellum organization
Sdel_0296	COG1191	sigma factor activity
Sdel_0297	COG1868	FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
Sdel_0298	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
Sdel_0298	COG1776	CheC inhibitor of MCP methylation
Sdel_0299	COG1611	Belongs to the LOG family
Sdel_0301	COG0463	Glycosyl transferase, family 2
Sdel_0303	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
Sdel_0307	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
Sdel_0309	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
Sdel_0316	COG0731	radical SAM domain protein
Sdel_0317	COG0407	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
Sdel_0319	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
Sdel_0326	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
Sdel_0327	COG0540	Belongs to the ATCase OTCase family
Sdel_0330	COG2200	EAL domain
Sdel_0330	COG3287	FIST C domain
Sdel_0330	COG2199	diguanylate cyclase activity
Sdel_0335	COG3118	belongs to the thioredoxin family
Sdel_0341	COG4628	conserved protein (DUF2132)
Sdel_0342	COG4221	oxidoreductase activity
Sdel_0344	COG3022	response to hydroperoxide
Sdel_0345	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
Sdel_0346	COG0267	Belongs to the bacterial ribosomal protein bL33 family
Sdel_0348	COG0250	Participates in transcription elongation, termination and antitermination
Sdel_0349	COG0080	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
Sdel_0350	COG0081	regulation of translation
Sdel_0351	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
Sdel_0352	COG0222	ribosome binding
Sdel_0353	COG0085	RNA polymerase activity
Sdel_0354	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
Sdel_0355	COG0048	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
Sdel_0359	COG2011	ABC-type metal ion transport system permease component
Sdel_0360	COG1464	Belongs to the NlpA lipoprotein family
Sdel_0363	COG0745	RESPONSE REGULATOR receiver
Sdel_0364	COG0747	negative chemotaxis
Sdel_0367	COG0840	transmembrane signaling receptor activity
Sdel_0368	COG0840	transmembrane signaling receptor activity
Sdel_0372	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
Sdel_0376	COG0357	Ribosomal RNA small subunit methyltransferase G
Sdel_0377	COG0840	transmembrane signaling receptor activity
Sdel_0378	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
Sdel_0379	COG1970	mechanosensitive ion channel activity
Sdel_0380	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
Sdel_0381	COG0113	porphobilinogen synthase activity
Sdel_0382	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
Sdel_0384	COG0635	Involved in the biosynthesis of porphyrin-containing compound
Sdel_0388	COG2814	Major facilitator Superfamily
Sdel_0389	COG3012	SEC-C Motif Domain Protein
Sdel_0390	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
Sdel_0392	COG3706	GGDEF domain
Sdel_0395	COG1053	succinate dehydrogenase
Sdel_0396	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
Sdel_0398	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
Sdel_0399	COG0628	permease
Sdel_0400	COG2255	four-way junction helicase activity
Sdel_0401	COG0413	3-methyl-2-oxobutanoate hydroxymethyltransferase activity
Sdel_0403	COG0159	tryptophan synthase activity
Sdel_0405	COG2853	Lipoprotein
Sdel_0407	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
Sdel_0408	COG1136	(ABC) transporter
Sdel_0409	COG1684	flagellar biosynthetic protein fliR
Sdel_0411	COG0194	GDP metabolic process
Sdel_0412	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
Sdel_0413	COG0018	arginyl-trna synthetase
Sdel_0415	COG0745	RESPONSE REGULATOR receiver
Sdel_0415	COG3706	GGDEF domain
Sdel_0420	COG1057	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
Sdel_0421	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
Sdel_0423	COG0149	triose-phosphate isomerase activity
Sdel_0424	COG0623	enoyl-[acyl-carrier-protein] reductase (NADH) activity
Sdel_0427	COG0195	Participates in both transcription termination and antitermination
Sdel_0429	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
Sdel_0435	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
Sdel_0436	COG0414	Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
Sdel_0437	COG1186	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
Sdel_0443	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
Sdel_0444	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
Sdel_0446	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
Sdel_0448	COG2207	Transcriptional regulator
Sdel_0448	COG4753	response regulator
Sdel_0449	COG4191	Histidine kinase
Sdel_0451	COG0582	viral genome integration into host DNA
Sdel_0463	COG1944	ATP diphosphatase activity
Sdel_0464	COG2610	gluconate transmembrane transporter activity
Sdel_0465	COG0513	Belongs to the DEAD box helicase family
Sdel_0467	COG2200	EAL domain
Sdel_0468	COG1151	hydroxylamine reductase activity
Sdel_0476	COG0559	Belongs to the binding-protein-dependent transport system permease family
Sdel_0480	COG1333	cytochrome c biogenesis protein
Sdel_0480	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
Sdel_0482	COG1546	Belongs to the CinA family
Sdel_0482	COG1058	Belongs to the CinA family
Sdel_0483	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
Sdel_0486	COG0517	IMP dehydrogenase activity
Sdel_0486	COG0516	GMP reductase activity
Sdel_0487	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
Sdel_0490	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
Sdel_0491	COG0436	Aminotransferase
Sdel_0494	COG1193	negative regulation of DNA recombination
Sdel_0495	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
Sdel_0496	COG0251	oxidation-reduction process
Sdel_0497	COG0579	oxidoreductase
Sdel_0501	COG0469	pyruvate kinase activity
Sdel_0502	COG0261	This protein binds to 23S rRNA in the presence of protein L20
Sdel_0503	COG0211	Belongs to the bacterial ribosomal protein bL27 family
Sdel_0504	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
Sdel_0505	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
Sdel_0506	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
Sdel_0508	COG1192	Involved in chromosome partitioning
Sdel_0509	COG1475	DNA binding
Sdel_0511	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
Sdel_0512	COG0712	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
Sdel_0514	COG0224	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
Sdel_0515	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
Sdel_0516	COG0355	proton-transporting ATP synthase activity, rotational mechanism
Sdel_0517	COG0811	peptide transport
Sdel_0518	COG0848	biopolymer transport protein
Sdel_0520	COG0823	Involved in the tonB-independent uptake of proteins
Sdel_0521	COG2885	chlorophyll binding
Sdel_0521	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
Sdel_0523	COG1047	Peptidyl-prolyl cis-trans
Sdel_0525	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
Sdel_0526	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
Sdel_0527	COG0037	tRNA processing
Sdel_0529	COG0070	glutamate synthase
Sdel_0529	COG0069	glutamate synthase activity
Sdel_0529	COG0067	glutamate synthase
Sdel_0530	COG0493	'glutamate synthase
Sdel_0532	COG0777	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
Sdel_0533	COG1576	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
Sdel_0534	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
Sdel_0536	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
Sdel_0541	COG0708	Exodeoxyribonuclease III
Sdel_0544	COG1846	Transcriptional regulator
Sdel_0550	COG0422	Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction
Sdel_0552	COG1113	amino acid transport
Sdel_0553	COG0730	response to heat
Sdel_0554	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
Sdel_0555	COG1301	dicarboxylic acid transport
Sdel_0556	COG1301	dicarboxylic acid transport
Sdel_0558	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
Sdel_0558	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
Sdel_0559	COG1971	Probably functions as a manganese efflux pump
Sdel_0562	COG0484	heat shock protein binding
Sdel_0564	COG0745	RESPONSE REGULATOR receiver
Sdel_0566	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
Sdel_0567	COG1454	alcohol dehydrogenase
Sdel_0570	COG0318	PFAM AMP-dependent synthetase and ligase
Sdel_0571	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
Sdel_0572	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
Sdel_0575	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
Sdel_0576	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
Sdel_0579	COG3706	GGDEF domain
Sdel_0581	COG0721	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
Sdel_0588	COG2205	protein histidine kinase activity
Sdel_0588	COG5002	protein histidine kinase activity
Sdel_0588	COG0784	Response regulator, receiver
Sdel_0591	COG0322	excinuclease ABC activity
Sdel_0593	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
Sdel_0594	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
Sdel_0595	COG0519	Catalyzes the synthesis of GMP from XMP
Sdel_0595	COG0518	GMP synthase (glutamine-hydrolyzing) activity
Sdel_0597	COG0151	Belongs to the GarS family
Sdel_0599	COG1452	involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane
Sdel_0601	COG0636	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
Sdel_0604	COG0511	ligase activity, forming carbon-carbon bonds
Sdel_0606	COG1866	Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA
Sdel_0607	COG0165	Argininosuccinate lyase
Sdel_0608	COG0537	adenosine 5'-monophosphoramidase activity
Sdel_0609	COG0016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
Sdel_0610	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
Sdel_0610	COG0072	phenylalanine-tRNA ligase activity
Sdel_0611	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
Sdel_0612	COG0761	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
Sdel_0613	COG1185	polyribonucleotide nucleotidyltransferase activity
Sdel_0613	COG0539	negative regulation of cytoplasmic translation
Sdel_0615	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
Sdel_0618	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
Sdel_0627	COG2081	HI0933 family
Sdel_0631	COG0840	transmembrane signaling receptor activity
Sdel_0632	COG0587	DNA-directed DNA polymerase activity
Sdel_0633	COG4191	Histidine kinase
Sdel_0635	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
Sdel_0636	COG0569	domain protein
Sdel_0638	COG0772	Belongs to the SEDS family
Sdel_0639	COG0564	pseudouridine synthase activity
Sdel_0640	COG3103	Sh3 type 3 domain protein
Sdel_0640	COG0366	Alpha amylase catalytic
Sdel_0641	COG0220	tRNA (guanine-N7-)-methyltransferase activity
Sdel_0645	COG0528	UMP kinase activity
Sdel_0648	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
Sdel_0650	COG0860	N-Acetylmuramoyl-L-alanine amidase
Sdel_0652	COG0563	adenylate kinase activity
Sdel_0653	COG0173	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
Sdel_0655	COG3706	GGDEF domain
Sdel_0655	COG0745	RESPONSE REGULATOR receiver
Sdel_0657	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
Sdel_0658	COG0497	DNA recombination
Sdel_0659	COG3706	GGDEF domain
Sdel_0660	COG0084	hydrolase, TatD family'
Sdel_0661	COG1388	LysM domain
Sdel_0661	COG3942	CHAP domain
Sdel_0662	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
Sdel_0663	COG0131	Imidazoleglycerol-phosphate dehydratase
Sdel_0664	COG1778	Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate
Sdel_0670	COG0768	penicillin binding
Sdel_0671	COG0319	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
Sdel_0673	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
Sdel_0673	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
Sdel_0675	COG0158	D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1
Sdel_0680	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
Sdel_0681	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
Sdel_0685	COG0745	RESPONSE REGULATOR receiver
Sdel_0686	COG0471	metal ion transport
Sdel_0690	COG2831	hemolysin activation secretion protein
Sdel_0694	COG0577	efflux transmembrane transporter activity
Sdel_0694	COG1136	(ABC) transporter
Sdel_0699	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
Sdel_0699	COG1333	cytochrome c biogenesis protein
Sdel_0700	COG3301	Polysulphide reductase, NrfD
Sdel_0701	COG0437	4 iron, 4 sulfur cluster binding
Sdel_0702	COG0545	Peptidyl-prolyl cis-trans isomerase
Sdel_0703	COG0484	heat shock protein binding
Sdel_0704	COG5002	protein histidine kinase activity
Sdel_0704	COG3850	Histidine kinase
Sdel_0705	COG0745	RESPONSE REGULATOR receiver
Sdel_0706	COG3005	denitrification pathway
Sdel_0708	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
Sdel_0708	COG1333	cytochrome c biogenesis protein
Sdel_0713	COG1346	cytolysis
Sdel_0714	COG1380	Effector of murein hydrolase LrgA
Sdel_0717	COG0848	biopolymer transport protein
Sdel_0718	COG0811	peptide transport
Sdel_0724	COG0243	molybdopterin cofactor binding
Sdel_0725	COG0437	4 iron, 4 sulfur cluster binding
Sdel_0726	COG0348	domain, Protein
Sdel_0727	COG3043	anaerobic respiration
Sdel_0728	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
Sdel_0728	COG1149	4fe-4S ferredoxin, iron-sulfur binding domain protein
Sdel_0735	COG3852	Histidine kinase
Sdel_0740	COG0723	plastoquinol--plastocyanin reductase activity
Sdel_0741	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
Sdel_0742	COG2857	Cytochrome c1
Sdel_0743	COG0745	RESPONSE REGULATOR receiver
Sdel_0744	COG4191	Histidine kinase
Sdel_0745	COG1473	amidohydrolase
Sdel_0746	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
Sdel_0747	COG3069	C4-dicarboxylate transmembrane transporter activity
Sdel_0748	COG2200	EAL domain
Sdel_0748	COG3287	FIST C domain
Sdel_0748	COG2199	diguanylate cyclase activity
Sdel_0749	COG0688	phosphatidylethanolamine metabolic process
Sdel_0750	COG0513	Belongs to the DEAD box helicase family
Sdel_0752	COG0217	transcriptional regulatory protein
Sdel_0757	COG0582	viral genome integration into host DNA
Sdel_0778	COG1484	DNA-dependent DNA replication
Sdel_0782	COG2026	Addiction module toxin, RelE StbE family
Sdel_0789	COG3045	CreA protein
Sdel_0792	COG2200	EAL domain
Sdel_0792	COG2199	diguanylate cyclase activity
Sdel_0794	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
Sdel_0795	COG2197	response regulator
Sdel_0799	COG2966	Psort location CytoplasmicMembrane, score
Sdel_0801	COG2217	Heavy metal translocating P-type atpase
Sdel_0807	COG0437	4 iron, 4 sulfur cluster binding
Sdel_0812	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
Sdel_0814	COG1120	ATPase activity
Sdel_0815	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
Sdel_0820	COG0352	thiamine-phosphate diphosphorylase activity
Sdel_0824	COG0697	spore germination
Sdel_0828	COG2176	DNA-directed DNA polymerase activity
Sdel_0831	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
Sdel_0833	COG0501	Belongs to the peptidase M48B family
Sdel_0835	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
Sdel_0836	COG2201	protein-glutamate methylesterase activity
Sdel_0837	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
Sdel_0838	COG0586	Pfam SNARE associated Golgi protein
Sdel_0839	COG0133	tryptophan synthase activity
Sdel_0840	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
Sdel_0842	COG0698	ribose 5-phosphate isomerase
Sdel_0843	COG1994	Peptidase M50
Sdel_0844	COG0681	Belongs to the peptidase S26 family
Sdel_0845	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
Sdel_0847	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
Sdel_0850	COG1060	Radical SAM enzyme that catalyzes the addition of the adenosyl radical to the double bond of 3- (1- carboxyvinyl)oxy benzoate, leading to aminodeoxyfutalosine (AFL), a key intermediate in the formation of menaquinone (MK, vitamin K2) from chorismate
Sdel_0851	COG0612	Peptidase, M16
Sdel_0852	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
Sdel_0858	COG1699	Binds to the C-terminal region of flagellin, which is implicated in polymerization, and participates in the assembly of the flagellum
Sdel_0859	COG4105	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
Sdel_0860	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
Sdel_0861	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
Sdel_0862	COG0629	single-stranded DNA binding
Sdel_0863	COG0360	Binds together with S18 to 16S ribosomal RNA
Sdel_0864	COG1466	dna polymerase III delta subunit
Sdel_0865	COG0557	exoribonuclease II activity
Sdel_0867	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
Sdel_0868	COG2894	cell division
Sdel_0869	COG0851	Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell
Sdel_0873	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
Sdel_0874	COG2860	membrane
Sdel_0875	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
Sdel_0878	COG0736	holo-[acyl-carrier-protein] synthase activity
Sdel_0879	COG1580	Controls the rotational direction of flagella during chemotaxis
Sdel_0880	COG1066	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
Sdel_0881	COG0552	protein localization to endoplasmic reticulum
Sdel_0882	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
Sdel_0884	COG1418	mRNA catabolic process
Sdel_0885	COG1132	(ABC) transporter
Sdel_0891	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
Sdel_0892	COG0745	RESPONSE REGULATOR receiver
Sdel_0893	COG5002	protein histidine kinase activity
Sdel_0893	COG5001	Diguanylate cyclase
Sdel_0896	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
Sdel_0903	COG1518	maintenance of DNA repeat elements
Sdel_0912	COG3437	response regulator, receiver
Sdel_0913	COG3850	Histidine kinase
Sdel_0913	COG4999	Histidine kinase
Sdel_0913	COG3437	response regulator, receiver
Sdel_0913	COG2205	protein histidine kinase activity
Sdel_0919	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
Sdel_0948	COG0419	ATPase involved in DNA repair
Sdel_0966	COG0582	viral genome integration into host DNA
Sdel_0967	COG0776	regulation of translation
Sdel_0969	COG1674	ftsk spoiiie
Sdel_0969	COG1196	nuclear chromosome segregation
Sdel_0970	COG1049	propionate catabolic process, 2-methylcitrate cycle
Sdel_0971	COG1047	Peptidyl-prolyl cis-trans
Sdel_0972	COG0574	Belongs to the PEP-utilizing enzyme family
Sdel_0972	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
Sdel_0975	COG0242	peptide deformylase activity
Sdel_0976	COG1309	transcriptional regulator
Sdel_0982	COG0840	transmembrane signaling receptor activity
Sdel_0984	COG2274	protein secretion by the type I secretion system
Sdel_1014	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
Sdel_1015	COG1832	CoA-binding protein
Sdel_1016	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
Sdel_1022	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
Sdel_1023	COG1137	ATPase activity
Sdel_1024	COG0802	atpase or kinase
Sdel_1025	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
Sdel_1026	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
Sdel_1027	COG0137	argininosuccinate synthase activity
Sdel_1030	COG5405	Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
Sdel_1031	COG1220	this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
Sdel_1040	COG1459	type II secretion system
Sdel_1044	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
Sdel_1045	COG0280	phosphate acetyltransferase
Sdel_1045	COG0857	belongs to the CobB CobQ family
Sdel_1046	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
Sdel_1047	COG1254	Belongs to the acylphosphatase family
Sdel_1048	COG2226	methyltransferase
Sdel_1048	COG0596	Alpha beta hydrolase
Sdel_1048	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
Sdel_1050	COG1181	Belongs to the D-alanine--D-alanine ligase family
Sdel_1051	COG0632	four-way junction helicase activity
Sdel_1053	COG0728	peptidoglycan biosynthetic process
Sdel_1054	COG0215	cysteine-tRNA ligase activity
Sdel_1055	COG1132	(ABC) transporter
Sdel_1056	COG0167	dihydroorotate dehydrogenase activity
Sdel_1058	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
Sdel_1059	COG1028	Short-chain dehydrogenase reductase Sdr
Sdel_1060	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
Sdel_1061	COG0750	zinc metalloprotease
Sdel_1062	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
Sdel_1063	COG3706	GGDEF domain
Sdel_1066	COG2095	MarC family integral membrane protein
Sdel_1067	COG1301	dicarboxylic acid transport
Sdel_1068	COG2056	Na+-H+ antiporter family
Sdel_1069	COG3957	D-xylulose 5-phosphate D-fructose 6-phosphate phosphoketolase
Sdel_1070	COG1733	regulation of RNA biosynthetic process
Sdel_1071	COG2249	NAD(P)H dehydrogenase (quinone) activity
Sdel_1072	COG0778	Nitroreductase
Sdel_1079	COG2183	response to ionizing radiation
Sdel_1082	COG3962	Belongs to the TPP enzyme family
Sdel_1083	COG1014	Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
Sdel_1083	COG0674	pyruvate-flavodoxin oxidoreductase activity
Sdel_1086	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
Sdel_1087	COG0045	succinate-CoA ligase (ADP-forming) activity
Sdel_1088	COG0039	L-malate dehydrogenase activity
Sdel_1094	COG0375	protein maturation
Sdel_1095	COG0309	Hydrogenase expression formation protein (HypE)
Sdel_1096	COG0409	Hydrogenase expression formation protein
Sdel_1097	COG0298	carbon dioxide binding
Sdel_1098	COG0378	Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG
Sdel_1101	COG0068	Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of NiFe -hydrogenases using carbamoylphosphate as a substrate. It functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide
Sdel_1102	COG0068	Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of NiFe -hydrogenases using carbamoylphosphate as a substrate. It functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide
Sdel_1103	COG0680	Initiates the rapid degradation of small, acid-soluble proteins during spore germination
Sdel_1104	COG1969	Ni Fe-hydrogenase, b-type cytochrome subunit
Sdel_1105	COG0374	Belongs to the NiFe NiFeSe hydrogenase large subunit family
Sdel_1106	COG1740	oxidoreductase activity, acting on hydrogen as donor, iron-sulfur protein as acceptor
Sdel_1108	COG0166	Belongs to the GPI family
Sdel_1109	COG1032	radical SAM domain protein
Sdel_1112	COG0582	viral genome integration into host DNA
Sdel_1122	COG1338	Plays a role in the flagellum-specific transport system
Sdel_1123	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
Sdel_1126	COG1989	Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue
Sdel_1128	COG0101	tRNA pseudouridine synthase activity
Sdel_1129	COG1472	Belongs to the glycosyl hydrolase 3 family
Sdel_1131	COG0064	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
Sdel_1134	COG0356	it plays a direct role in the translocation of protons across the membrane
Sdel_1135	COG1942	4-Oxalocrotonate Tautomerase
Sdel_1136	COG0659	secondary active sulfate transmembrane transporter activity
Sdel_1138	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
Sdel_1142	COG3951	Flagellar rod assembly protein muramidase FlgJ
Sdel_1143	COG1706	bacterial-type flagellum-dependent cell motility
Sdel_1144	COG0742	ribosomal rna small subunit methyltransferase
Sdel_1147	COG1345	Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end
Sdel_1151	COG0415	Belongs to the DNA photolyase family
Sdel_1153	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
Sdel_1154	COG0778	Nitroreductase
Sdel_1157	COG1979	alcohol dehydrogenase
Sdel_1163	COG2207	Transcriptional regulator
Sdel_1164	COG1538	Outer membrane efflux protein
Sdel_1168	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
Sdel_1169	COG1360	Flagellar Motor Protein
Sdel_1170	COG0488	(ABC) transporter
Sdel_1173	COG1234	tRNA 3'-trailer cleavage
Sdel_1174	COG0428	transporter
Sdel_1176	COG0351	phosphomethylpyrimidine kinase
Sdel_1177	COG0569	domain protein
Sdel_1177	COG0475	glutathione-regulated potassium exporter activity
Sdel_1178	COG0252	asparaginase activity
Sdel_1179	COG4191	Histidine kinase
Sdel_1180	COG0745	RESPONSE REGULATOR receiver
Sdel_1181	COG0585	pseudouridine synthase activity
Sdel_1182	COG0611	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
Sdel_1186	COG1966	Carbon starvation protein
Sdel_1187	COG2879	small protein
Sdel_1188	COG0523	cobalamin synthesis protein
Sdel_1194	COG3260	NADH ubiquinone oxidoreductase 20
Sdel_1196	COG0649	NAD binding
Sdel_1196	COG0852	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
Sdel_1196	COG0377	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
Sdel_1198	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
Sdel_1200	COG0493	'glutamate synthase
Sdel_1201	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
Sdel_1205	COG0840	transmembrane signaling receptor activity
Sdel_1211	COG3706	GGDEF domain
Sdel_1213	COG1451	nucleotide metabolic process
Sdel_1219	COG0628	permease
Sdel_1222	COG1131	(ABC) transporter
Sdel_1223	COG0612	Peptidase, M16
Sdel_1230	COG2040	homocysteine
Sdel_1234	COG3287	FIST C domain
Sdel_1234	COG2200	EAL domain
Sdel_1234	COG2199	diguanylate cyclase activity
Sdel_1235	COG0745	RESPONSE REGULATOR receiver
Sdel_1236	COG1573	uracil-dna glycosylase
Sdel_1238	COG0824	Thioesterase
Sdel_1239	COG0582	viral genome integration into host DNA
Sdel_1262	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
Sdel_1263	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
Sdel_1265	COG0337	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
Sdel_1267	COG0343	queuine tRNA-ribosyltransferase activity
Sdel_1268	COG0582	viral genome integration into host DNA
Sdel_1270	COG0406	alpha-ribazole phosphatase activity
Sdel_1273	COG4191	Histidine kinase
Sdel_1274	COG0471	metal ion transport
Sdel_1276	COG1838	Catalyzes the reversible hydration of fumarate to (S)- malate
Sdel_1276	COG1951	Catalyzes the reversible hydration of fumarate to (S)- malate
Sdel_1277	COG3875	lactate racemase activity
Sdel_1278	COG1641	Involved in the biosynthesis of a nickel-pincer cofactor ((SCS)Ni(II) pincer complex). Binds Ni(2 ), and functions in nickel delivery to pyridinium-3,5-bisthiocarboxylic acid mononucleotide (P2TMN), to form the mature cofactor. Is thus probably required for the activation of nickel-pincer cofactor- dependent enzymes
Sdel_1279	COG1606	tRNA processing
Sdel_1280	COG1691	(AIR) carboxylase
Sdel_1282	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
Sdel_1283	COG0303	'Molybdopterin
Sdel_1285	COG0163	prenyltransferase activity
Sdel_1288	COG0124	histidyl-tRNA synthetase
Sdel_1289	COG1166	arginine decarboxylase activity
Sdel_1290	COG1045	serine acetyltransferase
Sdel_1294	COG1044	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
Sdel_1295	COG0440	acetolactate synthase activity
Sdel_1296	COG0028	Belongs to the TPP enzyme family
Sdel_1298	COG0446	pyridine nucleotide-disulphide oxidoreductase
Sdel_1302	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
Sdel_1303	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
Sdel_1304	COG2603	Catalyzes the transfer of selenium from selenophosphate for conversion of 2-thiouridine to 2-selenouridine at the wobble position in tRNA
Sdel_1306	COG0134	indole-3-glycerol-phosphate synthase activity
Sdel_1308	COG0727	PFAM Uncharacterised protein family (UPF0153)
Sdel_1311	COG0492	ferredoxin-NADP+ reductase activity
Sdel_1312	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
Sdel_1313	COG0444	Belongs to the ABC transporter superfamily
Sdel_1314	COG0586	Pfam SNARE associated Golgi protein
Sdel_1315	COG3200	phospho-2-dehydro-3-deoxyheptonate aldolase
Sdel_1319	COG1592	Rubrerythrin
Sdel_1321	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
Sdel_1324	COG3030	protein affecting phage T7 exclusion by the F plasmid
Sdel_1325	COG0442	prolyl-tRNA aminoacylation
Sdel_1326	COG0373	Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA)
Sdel_1327	COG0142	geranyltranstransferase activity
Sdel_1331	COG1959	2 iron, 2 sulfur cluster binding
Sdel_1333	COG3706	GGDEF domain
Sdel_1334	COG0386	Belongs to the glutathione peroxidase family
Sdel_1335	COG0525	valine-tRNA ligase activity
Sdel_1336	COG0521	Mo-molybdopterin cofactor biosynthetic process
Sdel_1337	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
Sdel_1340	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
Sdel_1341	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
Sdel_1343	COG2195	Cleaves the N-terminal amino acid of tripeptides
Sdel_1345	COG0500	methyltransferase
Sdel_1346	COG2050	protein possibly involved in aromatic compounds catabolism
Sdel_1346	COG0182	Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P)
Sdel_1348	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
Sdel_1349	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
Sdel_1350	COG1663	tetraacyldisaccharide 4'-kinase activity
Sdel_1351	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
Sdel_1352	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
Sdel_1353	COG1212	Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria
Sdel_1355	COG4232	protein-disulfide reductase activity
Sdel_1358	COG0443	Heat shock 70 kDa protein
Sdel_1359	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
Sdel_1360	COG1420	regulation of RNA biosynthetic process
Sdel_1363	COG0184	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
Sdel_1364	COG1959	2 iron, 2 sulfur cluster binding
Sdel_1365	COG1298	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
Sdel_1366	COG2404	hydrolase activity, acting on ester bonds
Sdel_1368	COG2226	methyltransferase
Sdel_1371	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
Sdel_1372	COG0730	response to heat
Sdel_1374	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
Sdel_1377	COG0527	aspartate kinase activity
Sdel_1378	COG0494	nUDIX hydrolase
Sdel_1379	COG0635	Involved in the biosynthesis of porphyrin-containing compound
Sdel_1381	COG0789	Transcriptional regulator
Sdel_1382	COG0484	heat shock protein binding
Sdel_1384	COG0745	RESPONSE REGULATOR receiver
Sdel_1385	COG5002	protein histidine kinase activity
Sdel_1388	COG0653	protein targeting
Sdel_1390	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
Sdel_1393	COG0706	membrane insertase activity
Sdel_1394	COG0759	Could be involved in insertion of integral membrane proteins into the membrane
Sdel_1396	COG0230	Belongs to the bacterial ribosomal protein bL34 family
Sdel_1400	COG0542	response to heat
Sdel_1401	COG0793	Belongs to the peptidase S41A family
Sdel_1403	COG1828	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
Sdel_1404	COG0047	phosphoribosylformylglycinamidine synthase activity
Sdel_1406	COG0204	Acyl-transferase
Sdel_1407	COG0326	Molecular chaperone. Has ATPase activity
Sdel_1408	COG1715	Restriction endonuclease
Sdel_1409	COG1331	Highly conserved protein containing a thioredoxin domain
Sdel_1416	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
Sdel_1419	COG5290	Psort location Cytoplasmic, score
Sdel_1424	COG0275	rRNA processing
Sdel_1425	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
Sdel_1427	COG0849	cell division
Sdel_1428	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
Sdel_1430	COG2890	protein-(glutamine-N5) methyltransferase activity
Sdel_1430	COG0220	tRNA (guanine-N7-)-methyltransferase activity
Sdel_1431	COG0501	Belongs to the peptidase M48B family
Sdel_1434	COG0840	transmembrane signaling receptor activity
Sdel_1435	COG2151	metal-sulfur cluster biosynthetic enzyme
Sdel_1438	COG0138	bifunctional purine biosynthesis protein purh
Sdel_1439	COG1495	Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein
Sdel_1440	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
Sdel_1440	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
Sdel_1441	COG1607	acyl-coa hydrolase
Sdel_1443	COG0745	RESPONSE REGULATOR receiver
Sdel_1444	COG1053	succinate dehydrogenase
Sdel_1447	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
Sdel_1450	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
Sdel_1452	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
Sdel_1453	COG0805	protein transport
Sdel_1454	COG0809	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
Sdel_1456	COG1236	Exonuclease of the beta-lactamase fold involved in RNA processing
Sdel_1457	COG1022	Amp-dependent synthetase and ligase
Sdel_1459	COG4206	TonB-dependent receptor
Sdel_1460	COG2205	protein histidine kinase activity
Sdel_1461	COG0745	RESPONSE REGULATOR receiver
Sdel_1462	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
Sdel_1463	COG0569	domain protein
Sdel_1464	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
Sdel_1467	COG2068	MobA-Related Protein
Sdel_1468	COG1975	Xanthine and CO dehydrogenases maturation factor, XdhC CoxF family
Sdel_1468	COG3608	succinylglutamate desuccinylase aspartoacylase
Sdel_1470	COG0535	radical SAM domain protein
Sdel_1474	COG1231	oxidoreductase activity
Sdel_1476	COG5002	protein histidine kinase activity
Sdel_1480	COG2215	Belongs to the NiCoT transporter (TC 2.A.52) family
Sdel_1481	COG2010	Cytochrome c
Sdel_1486	COG3645	SOS response
Sdel_1487	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
Sdel_1488	COG0646	methionine synthase
Sdel_1488	COG1410	methionine synthase
Sdel_1490	COG0683	leucine binding
Sdel_1491	COG0840	transmembrane signaling receptor activity
Sdel_1493	COG0004	ammonium transporteR
Sdel_1494	COG0347	Belongs to the P(II) protein family
Sdel_1507	COG0288	reversible hydration of carbon dioxide
Sdel_1508	COG3123	guanosine phosphorylase activity
Sdel_1509	COG2081	HI0933 family
Sdel_1511	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
Sdel_1512	COG0788	formyltetrahydrofolate deformylase activity
Sdel_1513	COG0617	tRNA 3'-terminal CCA addition
Sdel_1516	COG0473	3-isopropylmalate dehydrogenase activity
Sdel_1517	COG0066	3-isopropylmalate dehydratase activity
Sdel_1523	COG4115	mRNA cleavage
Sdel_1525	COG1187	pseudouridine synthase activity
Sdel_1526	COG1119	ATPase activity
Sdel_1527	COG0640	Transcriptional regulator
Sdel_1528	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
Sdel_1529	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
Sdel_1530	COG2717	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. MsrQ provides electrons for reduction to the reductase catalytic subunit MsrP, using the quinone pool of the respiratory chain
Sdel_1533	COG4843	Uncharacterized protein conserved in bacteria (DUF2179)
Sdel_1534	COG4895	conserved protein (DUF2196)
Sdel_1538	COG0513	Belongs to the DEAD box helicase family
Sdel_1540	COG2824	Alkylphosphonate utilization operon protein PhnA
Sdel_1542	COG1296	Branched-chain amino acid permease (Azaleucine resistance)
Sdel_1544	COG4786	Flagellar basal body rod
Sdel_1545	COG4786	Flagellar basal body rod
Sdel_1546	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
Sdel_1549	COG0783	Belongs to the Dps family
Sdel_1553	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
Sdel_1553	COG1918	ferrous iron import across plasma membrane
Sdel_1554	COG1918	ferrous iron import across plasma membrane
Sdel_1556	COG1116	anion transmembrane transporter activity
Sdel_1557	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
Sdel_1559	COG4771	TonB-dependent receptor
Sdel_1561	COG4771	TonB-dependent receptor
Sdel_1564	COG4771	TonB-dependent receptor
Sdel_1568	COG0848	biopolymer transport protein
Sdel_1569	COG0811	peptide transport
Sdel_1572	COG1132	(ABC) transporter
Sdel_1574	COG4771	TonB-dependent receptor
Sdel_1576	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
Sdel_1577	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
Sdel_1578	COG3162	membrane
Sdel_1579	COG0745	RESPONSE REGULATOR receiver
Sdel_1580	COG5002	protein histidine kinase activity
Sdel_1583	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
Sdel_1584	COG1918	ferrous iron import across plasma membrane
Sdel_1589	COG0598	Magnesium transport protein CorA
Sdel_1590	COG0739	heme binding
Sdel_1592	COG0277	FAD linked oxidase domain protein
Sdel_1595	COG0305	Participates in initiation and elongation during chromosome replication
Sdel_1596	COG0821	Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
Sdel_1597	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
Sdel_1602	COG0556	nucleotide-excision repair
Sdel_1604	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
Sdel_1606	COG0135	phosphoribosylanthranilate isomerase activity
Sdel_1607	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
Sdel_1609	COG1364	Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
Sdel_1612	COG1692	metallophosphoesterase
Sdel_1613	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
Sdel_1615	COG0739	heme binding
Sdel_1616	COG0285	dihydrofolate synthase activity
Sdel_1619	COG0495	leucyl-tRNA aminoacylation
Sdel_1620	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
Sdel_1621	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
Sdel_1622	COG1862	Preprotein translocase
Sdel_1625	COG2360	Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine
Sdel_1626	COG0542	response to heat
Sdel_1627	COG2127	Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation
Sdel_1629	COG0691	Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
Sdel_1630	COG1947	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
Sdel_1631	COG1551	Could accelerate the degradation of some genes transcripts potentially through selective RNA binding
Sdel_1640	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
Sdel_1644	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
Sdel_1646	COG0336	Belongs to the RNA methyltransferase TrmD family
Sdel_1647	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
Sdel_1648	COG1837	Belongs to the UPF0109 family
Sdel_1649	COG0228	four-way junction DNA binding
Sdel_1650	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
Sdel_1651	COG0564	pseudouridine synthase activity
Sdel_1652	COG0220	tRNA (guanine-N7-)-methyltransferase activity
Sdel_1652	COG1519	Transferase
Sdel_1654	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
Sdel_1655	COG0752	glycyl-tRNA synthetase alpha subunit
Sdel_1657	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
Sdel_1660	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
Sdel_1661	COG0174	glutamine synthetase
Sdel_1663	COG0444	Belongs to the ABC transporter superfamily
Sdel_1664	COG0156	8-amino-7-oxononanoate synthase activity
Sdel_1665	COG0424	maF-like protein
Sdel_1667	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
Sdel_1670	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
Sdel_1671	COG0768	penicillin binding
Sdel_1673	COG1558	bacterial-type flagellum-dependent cell motility
Sdel_1674	COG1815	bacterial-type flagellum-dependent cell motility
Sdel_1675	COG0772	Belongs to the SEDS family
Sdel_1676	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
Sdel_1678	COG1555	photosystem II stabilization
Sdel_1678	COG1596	polysaccharide export
Sdel_1681	COG0512	Glutamine amidotransferase of anthranilate synthase
Sdel_1685	COG2252	PERMEase
Sdel_1686	COG1060	Radical SAM enzyme that catalyzes the addition of the adenosyl radical to the double bond of 3- (1- carboxyvinyl)oxy benzoate, leading to aminodeoxyfutalosine (AFL), a key intermediate in the formation of menaquinone (MK, vitamin K2) from chorismate
Sdel_1687	COG0133	tryptophan synthase activity
Sdel_1688	COG2844	Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen
Sdel_1689	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
Sdel_1696	COG0488	(ABC) transporter
Sdel_1702	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
Sdel_1703	COG0745	RESPONSE REGULATOR receiver
Sdel_1703	COG3706	GGDEF domain
Sdel_1705	COG2171	N-acyltransferase activity
Sdel_1706	COG0489	protein tyrosine kinase activity
Sdel_1707	COG1211	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
Sdel_1707	COG0245	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
Sdel_1709	COG2046	Belongs to the sulfate adenylyltransferase family
Sdel_1710	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
Sdel_1711	COG2353	YceI-like domain
Sdel_1712	COG1739	Uncharacterized protein family UPF0029
Sdel_1713	COG3842	ATPase activity
Sdel_1716	COG3842	ATPase activity
Sdel_1720	COG1686	Belongs to the peptidase S11 family
Sdel_1723	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
Sdel_1724	COG0577	efflux transmembrane transporter activity
Sdel_1724	COG1136	(ABC) transporter
Sdel_1725	COG1136	(ABC) transporter
Sdel_1726	COG1566	PFAM secretion protein HlyD family protein
Sdel_1730	COG0668	transmembrane transport
Sdel_1734	COG1271	oxidase subunit
Sdel_1735	COG1294	oxidase, subunit
Sdel_1737	COG3706	GGDEF domain
Sdel_1746	COG0284	orotidine-5'-phosphate decarboxylase activity
Sdel_1747	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
Sdel_1748	COG0054	6,7-dimethyl-8-ribityllumazine synthase activity
Sdel_1749	COG1262	PFAM Formylglycine-generating sulfatase enzyme
Sdel_1750	COG2877	3-deoxy-8-phosphooctulonate synthase activity
Sdel_1751	COG0697	spore germination
Sdel_1752	COG0668	transmembrane transport
Sdel_1753	COG1160	GTP binding
Sdel_1755	COG0180	Tryptophanyl-tRNA synthetase
Sdel_1756	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
Sdel_1758	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
Sdel_1759	COG1183	phosphatidylcholine synthase activity
Sdel_1760	COG0688	phosphatidylethanolamine metabolic process
Sdel_1761	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
Sdel_1762	COG2264	protein methyltransferase activity
Sdel_1764	COG0106	1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
Sdel_1765	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
Sdel_1769	COG1086	Polysaccharide biosynthesis protein
Sdel_1770	COG1898	dTDP-4-dehydrorhamnose 3,5-epimerase activity
Sdel_1771	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
Sdel_1778	COG1216	Glycosyl transferase, family 2
Sdel_1790	COG1089	Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose
Sdel_1793	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
Sdel_1796	COG1793	dna ligase
Sdel_1797	COG1088	dTDP-glucose 4,6-dehydratase activity
Sdel_1798	COG1209	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
Sdel_1805	COG0859	PFAM glycosyl transferase family 9
Sdel_1807	COG3642	lipopolysaccharide core region biosynthetic process
Sdel_1808	COG0859	PFAM glycosyl transferase family 9
Sdel_1812	COG0279	D-glycero-D-manno-heptose 7-phosphate biosynthetic process
Sdel_1813	COG0615	ADP-L-glycero-beta-D-manno-heptose biosynthetic process
Sdel_1813	COG2870	Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose
Sdel_1814	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
Sdel_1815	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
Sdel_1819	COG2217	Heavy metal translocating P-type atpase
Sdel_1820	COG5001	Diguanylate cyclase
Sdel_1820	COG5002	protein histidine kinase activity
Sdel_1826	COG0840	transmembrane signaling receptor activity
Sdel_1827	COG1984	allophanate hydrolase subunit 2
Sdel_1828	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
Sdel_1830	COG0445	tRNA wobble uridine modification
Sdel_1831	COG0723	plastoquinol--plastocyanin reductase activity
Sdel_1832	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
Sdel_1833	COG2857	Cytochrome c1
Sdel_1835	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
Sdel_1836	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
Sdel_1837	COG1028	Short-chain dehydrogenase reductase Sdr
Sdel_1838	COG0696	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
Sdel_1839	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
Sdel_1840	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
Sdel_1841	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
Sdel_1842	COG4943	cyclic-guanylate-specific phosphodiesterase activity
Sdel_1846	COG0390	transport system, permease component
Sdel_1847	COG0439	Biotin carboxylase
Sdel_1850	COG0306	phosphate transporter
Sdel_1851	COG0513	Belongs to the DEAD box helicase family
Sdel_1852	COG1671	Belongs to the UPF0178 family
Sdel_1854	COG0840	transmembrane signaling receptor activity
Sdel_1856	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
Sdel_1858	COG0573	inorganic phosphate transmembrane transporter activity
Sdel_1859	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
Sdel_1861	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
Sdel_1862	COG0651	ATP synthesis coupled electron transport
Sdel_1863	COG0650	Formate hydrogenlyase subunit 4
Sdel_1864	COG4237	Hydrogenase 4 membrane
Sdel_1865	COG0651	ATP synthesis coupled electron transport
Sdel_1866	COG3261	NADH dehydrogenase
Sdel_1866	COG3262	NADH dehydrogenase (ubiquinone), 30 kDa subunit
Sdel_1868	COG3260	NADH ubiquinone oxidoreductase 20
Sdel_1873	COG0745	RESPONSE REGULATOR receiver
Sdel_1875	COG1607	acyl-coa hydrolase
Sdel_1876	COG3852	Histidine kinase
Sdel_1877	COG0603	Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
Sdel_1878	COG0602	queuosine metabolic process
Sdel_1883	COG1702	phosphate starvation-inducible protein PhoH
Sdel_1884	COG1538	Outer membrane efflux protein
Sdel_1889	COG3633	Involved in the import of serine and threonine into the cell, with the concomitant import of sodium (symport system)
Sdel_1890	COG1854	S-ribosylhomocysteine lyase activity
Sdel_1894	COG1553	Part of a sulfur-relay system required for 2-thiolation of 5-methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions. Accepts sulfur from TusA and transfers it in turn to TusE
Sdel_1897	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
Sdel_1899	COG0546	phosphoglycolate phosphatase activity
Sdel_1905	COG0027	Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate
Sdel_1909	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
Sdel_1910	COG1074	ATP-dependent DNA helicase activity
Sdel_1916	COG2010	Cytochrome c
Sdel_1919	COG3278	Belongs to the heme-copper respiratory oxidase family
Sdel_1921	COG0840	transmembrane signaling receptor activity
Sdel_1923	COG0505	Belongs to the CarA family
Sdel_1927	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
Sdel_1928	COG3705	Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine
Sdel_1929	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
Sdel_1932	COG0546	phosphoglycolate phosphatase activity
Sdel_1933	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
Sdel_1936	COG0718	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
Sdel_1937	COG0853	Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine
Sdel_1938	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
Sdel_1941	COG0203	ribosomal protein L17
Sdel_1943	COG0522	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
Sdel_1944	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
Sdel_1945	COG0099	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
Sdel_1946	COG0257	Belongs to the bacterial ribosomal protein bL36 family
Sdel_1948	COG0024	Methionine aminopeptidase
Sdel_1949	COG0201	protein transport
Sdel_1950	COG0200	Binds to the 23S rRNA
Sdel_1952	COG0256	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
Sdel_1953	COG0097	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
Sdel_1954	COG0096	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
Sdel_1958	COG0093	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
Sdel_1959	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
Sdel_1960	COG0255	Belongs to the universal ribosomal protein uL29 family
Sdel_1961	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
Sdel_1962	COG0092	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
Sdel_1964	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
Sdel_1965	COG0090	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
Sdel_1966	COG0089	rRNA binding
Sdel_1967	COG0088	Forms part of the polypeptide exit tunnel
Sdel_1968	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
Sdel_1969	COG0051	transcription antitermination factor activity, RNA binding
Sdel_1971	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
Sdel_1973	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
Sdel_1974	COG0082	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
Sdel_1975	COG0571	ribonuclease III activity
Sdel_1976	COG0328	RNA-DNA hybrid ribonuclease activity
Sdel_1978	COG0358	DNA primase activity
Sdel_1979	COG0482	sulfurtransferase activity
Sdel_1980	COG2201	protein-glutamate methylesterase activity
Sdel_1983	COG0745	RESPONSE REGULATOR receiver
Sdel_1984	COG2205	protein histidine kinase activity
Sdel_1985	COG2201	protein-glutamate methylesterase activity
Sdel_1986	COG1871	Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis
Sdel_1987	COG5002	protein histidine kinase activity
Sdel_1989	COG0643	Histidine kinase
Sdel_1989	COG2198	Histidine kinase
Sdel_1991	COG0840	transmembrane signaling receptor activity
Sdel_1992	COG0835	chemotaxis
Sdel_1995	COG0582	viral genome integration into host DNA
Sdel_2004	COG0745	RESPONSE REGULATOR receiver
Sdel_2005	COG4191	Histidine kinase
Sdel_2006	COG0252	asparaginase activity
Sdel_2007	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
Sdel_2008	COG1027	Aspartate ammonia-lyase
Sdel_2009	COG1027	Aspartate ammonia-lyase
Sdel_2010	COG1028	Short-chain dehydrogenase reductase Sdr
Sdel_2019	COG1136	(ABC) transporter
Sdel_2020	COG0577	efflux transmembrane transporter activity
Sdel_2024	COG1775	2-hydroxyglutaryl-CoA dehydratase, D-component
Sdel_2030	COG1342	Belongs to the UPF0251 family
Sdel_2032	COG2200	EAL domain
Sdel_2033	COG0747	negative chemotaxis
Sdel_2034	COG0601	transmembrane transport
Sdel_2035	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
Sdel_2037	COG2194	sulfuric ester hydrolase activity
Sdel_2038	COG5002	protein histidine kinase activity
Sdel_2039	COG0745	RESPONSE REGULATOR receiver
Sdel_2041	COG1280	lysine exporter protein (LysE YggA)
Sdel_2042	COG1090	epimerase
Sdel_2043	COG1280	lysine exporter protein (LysE YggA)
Sdel_2047	COG2215	Belongs to the NiCoT transporter (TC 2.A.52) family
Sdel_2053	COG0709	Synthesizes selenophosphate from selenide and ATP
Sdel_2054	COG0425	Belongs to the sulfur carrier protein TusA family
Sdel_2057	COG3842	ATPase activity
Sdel_2058	COG0725	ABC transporter, periplasmic molybdate-binding protein
Sdel_2060	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
Sdel_2063	COG1120	ATPase activity
Sdel_2066	COG0848	biopolymer transport protein
Sdel_2067	COG0811	peptide transport
Sdel_2069	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
Sdel_2073	COG0437	4 iron, 4 sulfur cluster binding
Sdel_2074	COG3383	formate dehydrogenase (NAD+) activity
Sdel_2075	COG0243	molybdopterin cofactor binding
Sdel_2080	COG2205	protein histidine kinase activity
Sdel_2081	COG0745	RESPONSE REGULATOR receiver
Sdel_2082	COG1921	L-seryl-tRNASec selenium transferase activity
Sdel_2084	COG1053	succinate dehydrogenase
Sdel_2084	COG3976	FMN-binding domain protein
Sdel_2089	COG1053	succinate dehydrogenase
Sdel_2089	COG3976	FMN-binding domain protein
Sdel_2094	COG0745	RESPONSE REGULATOR receiver
Sdel_2095	COG2205	protein histidine kinase activity
Sdel_2097	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
Sdel_2100	COG2986	histidine ammonia-lyase
Sdel_2101	COG1028	Short-chain dehydrogenase reductase Sdr
Sdel_2107	COG1131	(ABC) transporter
Sdel_2120	COG2267	carboxylic ester hydrolase activity
Sdel_2123	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
Sdel_2124	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
Sdel_2125	COG0513	Belongs to the DEAD box helicase family
Sdel_2127	COG2608	mercury ion transmembrane transporter activity
Sdel_2128	COG1305	Transglutaminase-like
Sdel_2130	COG2205	protein histidine kinase activity
Sdel_2130	COG2202	Pas domain
Sdel_2135	COG0523	cobalamin synthesis protein
Sdel_2138	COG4191	Histidine kinase
Sdel_2139	COG0745	RESPONSE REGULATOR receiver
Sdel_2143	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
Sdel_2144	COG2821	murein-degrading enzyme. may play a role in recycling of muropeptides during cell elongation and or cell division
Sdel_2146	COG2814	Major facilitator Superfamily
Sdel_2150	COG0303	'Molybdopterin
Sdel_2151	COG0314	molybdopterin synthase activity
Sdel_2154	COG1104	cysteine desulfurase activity
Sdel_2155	COG1157	protein secretion by the type III secretion system
Sdel_2156	COG0302	gtp cyclohydrolase
Sdel_2157	COG0544	peptidyl-prolyl cis-trans isomerase activity
Sdel_2158	COG0740	serine-type endopeptidase activity
Sdel_2160	COG0242	peptide deformylase activity
Sdel_2162	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
Sdel_2162	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
Sdel_2163	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
Sdel_2164	COG2022	thiamine diphosphate biosynthetic process
Sdel_2168	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
Sdel_2172	COG0577	efflux transmembrane transporter activity
Sdel_2172	COG1136	(ABC) transporter
Sdel_2176	COG5001	Diguanylate cyclase
Sdel_2176	COG4251	negative regulation of phosphorylation
Sdel_2176	COG2203	Gaf domain
Sdel_2176	COG3706	GGDEF domain
Sdel_2178	COG0482	sulfurtransferase activity
Sdel_2179	COG2203	Gaf domain
Sdel_2179	COG2199	diguanylate cyclase activity
Sdel_2184	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
Sdel_2186	COG1077	Cell shape determining protein MreB Mrl
Sdel_2187	COG0861	Integral membrane protein TerC family
Sdel_2188	COG1427	Catalyzes the dehydration of chorismate into 3- (1- carboxyvinyl)oxy benzoate, a step in the biosynthesis of menaquinone (MK, vitamin K2)
Sdel_2189	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
Sdel_2190	COG0454	-acetyltransferase
Sdel_2194	COG0035	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
Sdel_2195	COG0281	malic enzyme
Sdel_2195	COG0280	phosphate acetyltransferase
Sdel_2196	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
Sdel_2197	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
Sdel_2198	COG0439	Biotin carboxylase
Sdel_2199	COG0511	ligase activity, forming carbon-carbon bonds
Sdel_2200	COG0717	Belongs to the dCTP deaminase family
Sdel_2204	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
Sdel_2205	COG1073	alpha beta
Sdel_2207	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
Sdel_2208	COG1086	Polysaccharide biosynthesis protein
Sdel_2209	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
Sdel_2210	COG1083	cytidylyl-transferase
Sdel_2212	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
Sdel_2213	COG2089	acid synthase
Sdel_2216	COG0367	asparagine synthase
Sdel_2220	COG2226	methyltransferase
Sdel_2222	COG1088	dTDP-glucose 4,6-dehydratase activity
Sdel_2224	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
Sdel_2229	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
Sdel_2230	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
Sdel_2231	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
Sdel_2235	COG0148	phosphopyruvate hydratase activity
Sdel_2236	COG0468	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
Sdel_2237	COG2107	Catalyzes the conversion of cyclic dehypoxanthine futalosine (cyclic DHFL) into 1,4-dihydroxy-6-naphthoate, a step in the biosynthesis of menaquinone (MK, vitamin K2)
Sdel_2238	COG1987	bacterial-type flagellum assembly
Sdel_2239	COG0812	UDP-N-acetylmuramate dehydrogenase activity
Sdel_2240	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
Sdel_2246	COG1408	metallophosphoesterase
Sdel_2247	COG1115	amino acid carrier protein
Sdel_2248	COG2233	PERMEase
Sdel_2249	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
Sdel_2250	COG0575	Belongs to the CDS family
Sdel_2253	COG1929	Belongs to the glycerate kinase type-1 family
Sdel_2254	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
Sdel_2257	COG0450	alkyl hydroperoxide reductase
Sdel_2259	COG0065	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
Sdel_2260	COG0746	molybdenum cofactor guanylyltransferase activity
Sdel_2261	COG2200	EAL domain
Sdel_2261	COG2199	diguanylate cyclase activity
Sdel_2261	COG3287	FIST C domain
Sdel_2264	COG0724	RNA recognition motif
Sdel_2265	COG0315	cyclic pyranopterin monophosphate synthase activity
Sdel_2270	COG0670	Belongs to the BI1 family
Sdel_2278	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
Sdel_2280	COG0233	cytoplasmic translational termination
Sdel_2281	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
Sdel_2286	COG1704	LemA family
Sdel_2289	COG1843	Required for flagellar hook formation. May act as a scaffolding protein
Sdel_2290	COG1749	Flagellar hook protein flgE
Sdel_2291	COG1749	Flagellar hook protein flgE