Sdel_0001 PF02511 Thymidylate synthase complementing protein Sdel_0002 PF02075 Crossover junction endodeoxyribonuclease RuvC Sdel_0003 PF00308 Bacterial dnaA protein Sdel_0003 PF08299 Bacterial dnaA protein helix-turn-helix Sdel_0003 PF11638 DnaA N-terminal domain Sdel_0004 PF00712 DNA polymerase III beta subunit, N-terminal domain Sdel_0004 PF02767 DNA polymerase III beta subunit, central domain Sdel_0004 PF02768 DNA polymerase III beta subunit, C-terminal domain Sdel_0005 PF00204 DNA gyrase B Sdel_0005 PF00986 DNA gyrase B subunit, carboxyl terminus Sdel_0005 PF01751 Toprim domain Sdel_0005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Sdel_0006 PF00563 EAL domain Sdel_0006 PF00990 GGDEF domain Sdel_0007 PF14489 QueF-like protein Sdel_0008 PF13023 HD domain Sdel_0009 PF03167 Uracil DNA glycosylase superfamily Sdel_0010 PF00633 Helix-hairpin-helix motif Sdel_0010 PF00730 HhH-GPD superfamily base excision DNA repair protein Sdel_0010 PF10576 Iron-sulfur binding domain of endonuclease III Sdel_0010 PF14815 NUDIX domain Sdel_0012 PF07690 Major Facilitator Superfamily Sdel_0013 PF00392 Bacterial regulatory proteins, gntR family Sdel_0013 PF07729 FCD domain Sdel_0015 PF08238 Sel1 repeat Sdel_0016 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Sdel_0018 PF06826 Sdel_0018 Sdel_0019 PF03573 outer membrane porin, OprD family Sdel_0020 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Sdel_0021 PF00528 Binding-protein-dependent transport system inner membrane component Sdel_0022 PF00528 Binding-protein-dependent transport system inner membrane component Sdel_0022 PF12911 Sdel_0022 Sdel_0023 PF00005 ABC transporter Sdel_0024 PF00005 ABC transporter Sdel_0025 PF01554 MatE Sdel_0026 PF04143 Sdel_0026 Sdel_0027 PF01206 Sulfurtransferase TusA Sdel_0028 PF00266 Aminotransferase class-V Sdel_0029 PF11823 Sdel_0029 Sdel_0030 PF03473 MOSC domain Sdel_0032 PF02463 RecF/RecN/SMC N terminal domain Sdel_0033 PF01875 Memo-like protein Sdel_0034 PF01871 AMMECR1 Sdel_0036 PF00892 EamA-like transporter family Sdel_0037 PF05728 Uncharacterised protein family (UPF0227) Sdel_0039 PF00384 Molybdopterin oxidoreductase Sdel_0039 PF01568 Molydopterin dinucleotide binding domain Sdel_0039 PF04879 Molybdopterin oxidoreductase Fe4S4 domain Sdel_0040 PF13744 Helix-turn-helix domain Sdel_0041 PF00920 Dehydratase family Sdel_0042 PF01914 Sdel_0042 Sdel_0044 PF00483 Nucleotidyl transferase Sdel_0045 PF00117 Glutamine amidotransferase class-I Sdel_0045 PF06418 CTP synthase N-terminus Sdel_0046 PF01368 DHH family Sdel_0046 PF02272 DHHA1 domain Sdel_0047 PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Sdel_0048 PF00795 Carbon-nitrogen hydrolase Sdel_0049 PF00268 Ribonucleotide reductase, small chain Sdel_0050 PF04055 Radical SAM superfamily Sdel_0050 PF13353 4Fe-4S single cluster domain Sdel_0051 PF13597 Anaerobic ribonucleoside-triphosphate reductase Sdel_0052 PF03477 ATP cone domain Sdel_0052 PF13597 Anaerobic ribonucleoside-triphosphate reductase Sdel_0053 PF01177 Asp/Glu/Hydantoin racemase Sdel_0054 PF00317 Ribonucleotide reductase, all-alpha domain Sdel_0054 PF02867 Ribonucleotide reductase, barrel domain Sdel_0054 PF03477 ATP cone domain Sdel_0055 PF00206 Lyase Sdel_0055 PF10397 Adenylosuccinate lyase C-terminus Sdel_0056 PF00849 RNA pseudouridylate synthase Sdel_0057 PF01557 Fumarylacetoacetate (FAA) hydrolase family Sdel_0059 PF04055 Radical SAM superfamily Sdel_0060 PF01048 Phosphorylase superfamily Sdel_0061 PF00977 Histidine biosynthesis protein Sdel_0062 PF00398 Ribosomal RNA adenine dimethylase Sdel_0063 PF00753 Metallo-beta-lactamase superfamily Sdel_0063 PF07521 RNA-metabolising metallo-beta-lactamase Sdel_0064 PF00571 CBS domain Sdel_0064 PF01380 SIS domain Sdel_0065 PF00849 RNA pseudouridylate synthase Sdel_0065 PF01479 S4 domain Sdel_0066 PF05496 Holliday junction DNA helicase ruvB N-terminus Sdel_0066 PF12002 MgsA AAA+ ATPase C terminal Sdel_0066 PF16193 Sdel_0066 Sdel_0068 PF01312 FlhB HrpN YscU SpaS Family Sdel_0069 PF02698 DUF218 domain Sdel_0070 PF00586 AIR synthase related protein, N-terminal domain Sdel_0070 PF02769 AIR synthase related protein, C-terminal domain Sdel_0071 PF01121 Dephospho-CoA kinase Sdel_0072 PF01678 Diaminopimelate epimerase Sdel_0073 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase Sdel_0074 PF00472 RF-1 domain Sdel_0074 PF03462 PCRF domain Sdel_0075 PF01649 Ribosomal protein S20 Sdel_0076 PF02254 TrkA-N domain Sdel_0078 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain Sdel_0078 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I Sdel_0078 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II Sdel_0078 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III Sdel_0079 PF01252 Sdel_0079 Sdel_0080 PF00884 Sulfatase Sdel_0081 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) Sdel_0081 PF03129 Anticodon binding domain Sdel_0081 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain Sdel_0082 PF00707 Translation initiation factor IF-3, C-terminal domain Sdel_0082 PF05198 Translation initiation factor IF-3, N-terminal domain Sdel_0083 PF01632 Ribosomal protein L35 Sdel_0084 PF00453 Ribosomal protein L20 Sdel_0085 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase Sdel_0085 PF12801 Sdel_0085 Sdel_0085 PF13746 4Fe-4S dicluster domain Sdel_0086 PF00239 Resolvase, N terminal domain Sdel_0087 PF01165 Ribosomal protein S21 Sdel_0090 PF03738 Glutathionylspermidine synthase preATP-grasp Sdel_0091 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Sdel_0091 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Sdel_0092 PF04461 Protein of unknown function (DUF520) Sdel_0094 PF01219 Prokaryotic diacylglycerol kinase Sdel_0096 PF00512 His Kinase A (phospho-acceptor) domain Sdel_0096 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Sdel_0097 PF00072 Response regulator receiver domain Sdel_0097 PF00486 Transcriptional regulatory protein, C terminal Sdel_0098 PF06518 Protein of unknown function (DUF1104) Sdel_0099 PF03886 Protein of unknown function (DUF330) Sdel_0100 PF02470 Sdel_0100 Sdel_0101 PF00005 ABC transporter Sdel_0102 PF02405 Sdel_0102 Sdel_0103 PF02588 Sdel_0103 Sdel_0103 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) Sdel_0104 PF00543 Nitrogen regulatory protein P-II Sdel_0105 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD Sdel_0106 PF00072 Response regulator receiver domain Sdel_0106 PF05732 Sdel_0106 Sdel_0107 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Sdel_0108 PF13458 Periplasmic binding protein Sdel_0109 PF13489 Methyltransferase domain Sdel_0111 PF07690 Major Facilitator Superfamily Sdel_0112 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Sdel_0112 PF00672 HAMP domain Sdel_0112 PF08269 Cache domain Sdel_0113 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Sdel_0113 PF00672 HAMP domain Sdel_0113 PF08269 Cache domain Sdel_0114 PF08543 Phosphomethylpyrimidine kinase Sdel_0115 PF03653 Sdel_0115 Sdel_0117 PF00032 Cytochrome b(C-terminal)/b6/petD Sdel_0117 PF00033 Cytochrome b(N-terminal)/b6/petB Sdel_0118 PF00355 Rieske [2Fe-2S] domain Sdel_0119 PF00248 Aldo/keto reductase family Sdel_0120 PF00072 Response regulator receiver domain Sdel_0120 PF00486 Transcriptional regulatory protein, C terminal Sdel_0121 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Sdel_0122 PF07238 PilZ domain Sdel_0123 PF00528 Binding-protein-dependent transport system inner membrane component Sdel_0124 PF00497 Bacterial extracellular solute-binding proteins, family 3 Sdel_0125 PF00005 ABC transporter Sdel_0127 PF00034 Cytochrome c Sdel_0128 PF00892 EamA-like transporter family Sdel_0129 PF00950 Sdel_0129 Sdel_0130 PF00005 ABC transporter Sdel_0131 PF01297 Periplasmic solute binding protein family Sdel_0132 PF01475 Ferric uptake regulator family Sdel_0134 PF01261 Xylose isomerase-like TIM barrel Sdel_0135 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) Sdel_0136 PF00501 AMP-binding enzyme Sdel_0136 PF13193 AMP-binding enzyme C-terminal domain Sdel_0137 PF00004 ATPase family associated with various cellular activities (AAA) Sdel_0138 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 Sdel_0139 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit Sdel_0140 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit Sdel_0141 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit Sdel_0142 PF16514 Sdel_0142 Sdel_0144 PF00037 4Fe-4S binding domain Sdel_0144 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region Sdel_0144 PF13510 2Fe-2S iron-sulfur cluster binding domain Sdel_0145 PF00146 NADH dehydrogenase Sdel_0146 PF12838 4Fe-4S dicluster domain Sdel_0147 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 Sdel_0148 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L Sdel_0149 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains Sdel_0149 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus Sdel_0150 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains Sdel_0151 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains Sdel_0153 PF01715 IPP transferase Sdel_0154 PF01040 UbiA prenyltransferase family Sdel_0157 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Sdel_0157 PF13682 Chemoreceptor zinc-binding domain Sdel_0158 PF08447 PAS fold Sdel_0159 PF04055 Radical SAM superfamily Sdel_0159 PF06463 Molybdenum Cofactor Synthesis C Sdel_0159 PF13353 4Fe-4S single cluster domain Sdel_0160 PF00994 Probable molybdopterin binding domain Sdel_0160 PF03453 MoeA N-terminal region (domain I and II) Sdel_0162 PF04452 RNA methyltransferase Sdel_0163 PF01197 Ribosomal protein L31 Sdel_0164 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Sdel_0165 PF00588 SpoU rRNA Methylase family Sdel_0165 PF08032 RNA 2'-O ribose methyltransferase substrate binding Sdel_0168 PF00155 Aminotransferase class I and II Sdel_0169 PF00742 Homoserine dehydrogenase Sdel_0169 PF01842 ACT domain Sdel_0169 PF03447 Homoserine dehydrogenase, NAD binding domain Sdel_0170 PF02021 Uncharacterised protein family UPF0102 Sdel_0171 PF00085 Thioredoxin Sdel_0172 PF07992 Pyridine nucleotide-disulphide oxidoreductase Sdel_0173 PF01113 Dihydrodipicolinate reductase, N-terminus Sdel_0173 PF05173 Dihydrodipicolinate reductase, C-terminus Sdel_0174 PF00156 Phosphoribosyl transferase domain Sdel_0174 PF13537 Glutamine amidotransferase domain Sdel_0175 PF04055 Radical SAM superfamily Sdel_0175 PF16199 Sdel_0175 Sdel_0176 PF09624 Sdel_0176 Sdel_0177 PF09624 Sdel_0177 Sdel_0178 PF01502 Phosphoribosyl-AMP cyclohydrolase Sdel_0178 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase Sdel_0179 PF01145 SPFH domain / Band 7 family Sdel_0180 PF01063 Aminotransferase class IV Sdel_0181 PF00578 AhpC/TSA family Sdel_0182 PF05359 Sdel_0182 Sdel_0183 PF02677 Sdel_0183 Sdel_0184 PF07977 FabA-like domain Sdel_0185 PF00132 Bacterial transferase hexapeptide (six repeats) Sdel_0185 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 Sdel_0186 PF06689 ClpX C4-type zinc finger Sdel_0186 PF07724 AAA domain (Cdc48 subfamily) Sdel_0186 PF10431 C-terminal, D2-small domain, of ClpB protein Sdel_0187 PF06723 MreB/Mbl protein Sdel_0188 PF04085 rod shape-determining protein MreC Sdel_0189 PF02142 MGS-like domain Sdel_0189 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain Sdel_0189 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain Sdel_0192 PF02579 Dinitrogenase iron-molybdenum cofactor Sdel_0193 PF02579 Dinitrogenase iron-molybdenum cofactor Sdel_0194 PF00037 4Fe-4S binding domain Sdel_0194 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain Sdel_0195 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain Sdel_0197 PF02001 Sdel_0197 Sdel_0198 PF00899 ThiF family Sdel_0199 PF01975 Survival protein SurE Sdel_0200 PF02684 Sdel_0200 Sdel_0201 PF01272 Transcription elongation factor, GreA/GreB, C-term Sdel_0201 PF03449 Transcription elongation factor, N-terminal Sdel_0202 PF01118 Semialdehyde dehydrogenase, NAD binding domain Sdel_0202 PF02774 Semialdehyde dehydrogenase, dimerisation domain Sdel_0204 PF00072 Response regulator receiver domain Sdel_0204 PF01584 CheW-like domain Sdel_0205 PF00072 Response regulator receiver domain Sdel_0205 PF01584 CheW-like domain Sdel_0205 PF01627 Hpt domain Sdel_0205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Sdel_0205 PF02895 Signal transducing histidine kinase, homodimeric domain Sdel_0206 PF01584 CheW-like domain Sdel_0207 PF02219 Methylenetetrahydrofolate reductase Sdel_0208 PF12710 haloacid dehalogenase-like hydrolase Sdel_0209 PF00923 Transaldolase Sdel_0210 PF00437 Type II/IV secretion system protein Sdel_0211 PF01386 Ribosomal L25p family Sdel_0211 PF14693 Ribosomal protein TL5, C-terminal domain Sdel_0212 PF01195 Peptidyl-tRNA hydrolase Sdel_0213 PF03739 Sdel_0213 Sdel_0214 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain Sdel_0214 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain Sdel_0215 PF13242 HAD-hyrolase-like Sdel_0215 PF13344 Haloacid dehalogenase-like hydrolase Sdel_0216 PF00800 Prephenate dehydratase Sdel_0216 PF01817 Chorismate mutase type II Sdel_0216 PF01842 ACT domain Sdel_0217 PF00155 Aminotransferase class I and II Sdel_0218 PF01514 Secretory protein of YscJ/FliF family Sdel_0218 PF08345 Sdel_0218 Sdel_0219 PF01706 FliG C-terminal domain Sdel_0219 PF14841 FliG middle domain Sdel_0219 PF14842 FliG N-terminal domain Sdel_0220 PF02108 Sdel_0220 Sdel_0221 PF02779 Transketolase, pyrimidine binding domain Sdel_0221 PF02780 Transketolase, C-terminal domain Sdel_0221 PF13292 1-deoxy-D-xylulose-5-phosphate synthase Sdel_0222 PF01475 Ferric uptake regulator family Sdel_0223 PF00578 AhpC/TSA family Sdel_0223 PF10417 C-terminal domain of 1-Cys peroxiredoxin Sdel_0224 PF12838 4Fe-4S dicluster domain Sdel_0225 PF00334 Nucleoside diphosphate kinase Sdel_0226 PF02620 Sdel_0226 Sdel_0227 PF01783 Ribosomal L32p protein family Sdel_0228 PF02504 Fatty acid synthesis protein Sdel_0229 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal Sdel_0229 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III Sdel_0230 PF02153 Prephenate dehydrogenase Sdel_0231 PF01103 Surface antigen Sdel_0231 PF07244 Surface antigen variable number repeat Sdel_0232 PF02541 Ppx/GppA phosphatase family Sdel_0233 PF00037 4Fe-4S binding domain Sdel_0234 PF00512 His Kinase A (phospho-acceptor) domain Sdel_0234 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Sdel_0235 PF00072 Response regulator receiver domain Sdel_0235 PF00486 Transcriptional regulatory protein, C terminal Sdel_0236 PF02152 Dihydroneopterin aldolase Sdel_0237 PF02660 Sdel_0237 Sdel_0238 PF02445 Quinolinate synthetase A protein Sdel_0239 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain Sdel_0239 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain Sdel_0240 PF01312 FlhB HrpN YscU SpaS Family Sdel_0241 PF01368 DHH family Sdel_0241 PF02272 DHHA1 domain Sdel_0242 PF01551 Peptidase family M23 Sdel_0243 PF03775 Septum formation inhibitor MinC, C-terminal domain Sdel_0244 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase Sdel_0246 PF00288 GHMP kinases N terminal domain Sdel_0246 PF08544 GHMP kinases C terminal Sdel_0248 PF00009 Elongation factor Tu GTP binding domain Sdel_0248 PF04760 Translation initiation factor IF-2, N-terminal region Sdel_0248 PF11987 Translation-initiation factor 2 Sdel_0249 PF02033 Ribosome-binding factor A Sdel_0250 PF02576 Uncharacterised BCR, YhbC family COG0779 Sdel_0250 PF17384 Sdel_0250 Sdel_0251 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region Sdel_0251 PF01872 RibD C-terminal domain Sdel_0252 PF01925 Sdel_0252 Sdel_0253 PF03745 Domain of unknown function (DUF309) Sdel_0254 PF00563 EAL domain Sdel_0254 PF00990 GGDEF domain Sdel_0254 PF05228 Sdel_0254 Sdel_0254 PF08447 PAS fold Sdel_0255 PF00313 'Cold-shock' DNA-binding domain Sdel_0256 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Sdel_0257 PF00072 Response regulator receiver domain Sdel_0257 PF00486 Transcriptional regulatory protein, C terminal Sdel_0258 PF14827 Sensory domain of two-component sensor kinase Sdel_0259 PF00034 Cytochrome c Sdel_0260 PF11756 Sdel_0260 Sdel_0261 PF04055 Radical SAM superfamily Sdel_0261 PF05430 S-adenosyl-L-methionine-dependent methyltransferase Sdel_0261 PF16199 Sdel_0261 Sdel_0262 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Sdel_0262 PF14827 Sensory domain of two-component sensor kinase Sdel_0263 PF01075 Glycosyltransferase family 9 (heptosyltransferase) Sdel_0264 PF00132 Bacterial transferase hexapeptide (six repeats) Sdel_0265 PF00384 Molybdopterin oxidoreductase Sdel_0265 PF01568 Molydopterin dinucleotide binding domain Sdel_0265 PF04879 Molybdopterin oxidoreductase Fe4S4 domain Sdel_0266 PF13247 4Fe-4S dicluster domain Sdel_0267 PF03916 Sdel_0267 Sdel_0268 PF00563 EAL domain Sdel_0268 PF00990 GGDEF domain Sdel_0268 PF08495 Sdel_0268 Sdel_0268 PF10442 Sdel_0268 Sdel_0268 PF13426 PAS domain Sdel_0269 PF00384 Molybdopterin oxidoreductase Sdel_0269 PF01568 Molydopterin dinucleotide binding domain Sdel_0269 PF04879 Molybdopterin oxidoreductase Fe4S4 domain Sdel_0270 PF13247 4Fe-4S dicluster domain Sdel_0271 PF03916 Sdel_0271 Sdel_0272 PF00072 Response regulator receiver domain Sdel_0272 PF00486 Transcriptional regulatory protein, C terminal Sdel_0273 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Sdel_0274 PF14827 Sensory domain of two-component sensor kinase Sdel_0275 PF04055 Radical SAM superfamily Sdel_0275 PF13394 4Fe-4S single cluster domain Sdel_0276 PF12823 Sdel_0276 Sdel_0278 PF01368 DHH family Sdel_0278 PF02833 DHHA2 domain Sdel_0280 PF01209 ubiE/COQ5 methyltransferase family Sdel_0281 PF02601 Sdel_0281 Sdel_0281 PF13742 Sdel_0281 Sdel_0282 PF00962 Adenosine/AMP deaminase Sdel_0283 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase Sdel_0284 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Sdel_0284 PF03466 LysR substrate binding domain Sdel_0285 PF03601 Sdel_0285 Sdel_0287 PF02588 Sdel_0287 Sdel_0287 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) Sdel_0288 PF01343 Peptidase family S49 Sdel_0289 PF01979 Amidohydrolase family Sdel_0290 PF01220 Dehydroquinase class II Sdel_0291 PF00557 Metallopeptidase family M24 Sdel_0292 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) Sdel_0293 PF00448 SRP54-type protein, GTPase domain Sdel_0294 PF10609 ParA/MinD ATPase like Sdel_0296 PF04542 Sigma-70 region 2 Sdel_0296 PF04545 Sigma-70, region 4 Sdel_0297 PF01052 Surface presentation of antigens (SPOA) Sdel_0297 PF02154 Flagellar motor switch protein FliM Sdel_0298 PF01052 Surface presentation of antigens (SPOA) Sdel_0299 PF03641 Possible lysine decarboxylase Sdel_0301 PF00535 Glycosyl transferase family 2 Sdel_0302 PF08889 Sdel_0302 Sdel_0303 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family Sdel_0304 PF00892 EamA-like transporter family Sdel_0305 PF13499 EF-hand domain pair Sdel_0306 PF14358 Sdel_0306 Sdel_0307 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase Sdel_0307 PF14572 Phosphoribosyl synthetase-associated domain Sdel_0308 PF00009 Elongation factor Tu GTP binding domain Sdel_0308 PF00679 Elongation factor G C-terminus Sdel_0308 PF03144 Elongation factor Tu domain 2 Sdel_0308 PF06421 GTP-binding protein LepA C-terminus Sdel_0309 PF00156 Phosphoribosyl transferase domain Sdel_0310 PF00857 Isochorismatase family Sdel_0311 PF07690 Major Facilitator Superfamily Sdel_0312 PF00171 Aldehyde dehydrogenase family Sdel_0313 PF05610 Sdel_0313 Sdel_0314 PF16868 Sdel_0314 Sdel_0315 PF06808 Sdel_0315 Sdel_0316 PF04055 Radical SAM superfamily Sdel_0316 PF13394 4Fe-4S single cluster domain Sdel_0317 PF01208 Uroporphyrinogen decarboxylase (URO-D) Sdel_0318 PF03350 Sdel_0318 Sdel_0319 PF01118 Semialdehyde dehydrogenase, NAD binding domain Sdel_0319 PF02774 Semialdehyde dehydrogenase, dimerisation domain Sdel_0320 PF00072 Response regulator receiver domain Sdel_0320 PF00158 Sigma-54 interaction domain Sdel_0323 PF00521 DNA gyrase/topoisomerase IV, subunit A Sdel_0323 PF03989 DNA gyrase C-terminal domain, beta-propeller Sdel_0324 PF01797 Transposase IS200 like Sdel_0325 PF00056 lactate/malate dehydrogenase, NAD binding domain Sdel_0325 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain Sdel_0326 PF01979 Amidohydrolase family Sdel_0327 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain Sdel_0327 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain Sdel_0330 PF00563 EAL domain Sdel_0330 PF00990 GGDEF domain Sdel_0332 PF01909 Nucleotidyltransferase domain Sdel_0333 PF01934 Protein of unknown function DUF86 Sdel_0334 PF13289 Sdel_0334 Sdel_0335 PF00085 Thioredoxin Sdel_0336 PF14336 Domain of unknown function (DUF4392) Sdel_0337 PF07286 Protein of unknown function (DUF1445) Sdel_0339 PF07366 SnoaL-like polyketide cyclase Sdel_0340 PF00892 EamA-like transporter family Sdel_0341 PF09905 Uncharacterized conserved protein (DUF2132) Sdel_0342 PF00106 short chain dehydrogenase Sdel_0344 PF03883 Sdel_0344 Sdel_0345 PF00009 Elongation factor Tu GTP binding domain Sdel_0345 PF03143 Elongation factor Tu C-terminal domain Sdel_0345 PF03144 Elongation factor Tu domain 2 Sdel_0346 PF00471 Ribosomal protein L33 Sdel_0347 PF00584 SecE/Sec61-gamma subunits of protein translocation complex Sdel_0348 PF02357 Transcription termination factor nusG Sdel_0349 PF00298 Ribosomal protein L11, RNA binding domain Sdel_0349 PF03946 Ribosomal protein L11, N-terminal domain Sdel_0350 PF00687 Ribosomal protein L1p/L10e family Sdel_0351 PF00466 Ribosomal protein L10 Sdel_0352 PF00542 Ribosomal protein L7/L12 C-terminal domain Sdel_0352 PF16320 Sdel_0352 Sdel_0353 PF00562 RNA polymerase Rpb2, domain 6 Sdel_0353 PF04560 RNA polymerase Rpb2, domain 7 Sdel_0353 PF04561 RNA polymerase Rpb2, domain 2 Sdel_0353 PF04563 RNA polymerase beta subunit Sdel_0353 PF04565 RNA polymerase Rpb2, domain 3 Sdel_0353 PF10385 RNA polymerase beta subunit external 1 domain Sdel_0354 PF00623 RNA polymerase Rpb1, domain 2 Sdel_0354 PF04983 RNA polymerase Rpb1, domain 3 Sdel_0354 PF04997 RNA polymerase Rpb1, domain 1 Sdel_0354 PF04998 RNA polymerase Rpb1, domain 5 Sdel_0354 PF05000 RNA polymerase Rpb1, domain 4 Sdel_0355 PF00164 Ribosomal protein S12/S23 Sdel_0356 PF00177 Ribosomal protein S7p/S5e Sdel_0357 PF00009 Elongation factor Tu GTP binding domain Sdel_0357 PF00679 Elongation factor G C-terminus Sdel_0357 PF03144 Elongation factor Tu domain 2 Sdel_0357 PF03764 Elongation factor G, domain IV Sdel_0357 PF14492 Elongation Factor G, domain II Sdel_0358 PF00005 ABC transporter Sdel_0358 PF09383 NIL domain Sdel_0359 PF00528 Binding-protein-dependent transport system inner membrane component Sdel_0360 PF03180 NLPA lipoprotein Sdel_0361 PF00384 Molybdopterin oxidoreductase Sdel_0361 PF01568 Molydopterin dinucleotide binding domain Sdel_0361 PF10518 TAT (twin-arginine translocation) pathway signal sequence Sdel_0363 PF00072 Response regulator receiver domain Sdel_0363 PF00486 Transcriptional regulatory protein, C terminal Sdel_0364 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Sdel_0365 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Sdel_0366 PF03573 outer membrane porin, OprD family Sdel_0367 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Sdel_0367 PF13682 Chemoreceptor zinc-binding domain Sdel_0368 PF08447 PAS fold Sdel_0370 PF03734 L,D-transpeptidase catalytic domain Sdel_0372 PF00842 Alanine racemase, C-terminal domain Sdel_0372 PF01168 Alanine racemase, N-terminal domain Sdel_0373 PF00990 GGDEF domain Sdel_0375 PF02069 Prokaryotic metallothionein Sdel_0376 PF02527 rRNA small subunit methyltransferase G Sdel_0377 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Sdel_0377 PF08376 Nitrate and nitrite sensing Sdel_0378 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain Sdel_0378 PF02777 Iron/manganese superoxide dismutases, C-terminal domain Sdel_0379 PF01741 Large-conductance mechanosensitive channel, MscL Sdel_0380 PF00925 GTP cyclohydrolase II Sdel_0381 PF00490 Delta-aminolevulinic acid dehydratase Sdel_0382 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain Sdel_0382 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain Sdel_0383 PF10788 Sdel_0383 Sdel_0384 PF04055 Radical SAM superfamily Sdel_0384 PF06969 HemN C-terminal domain Sdel_0385 PF02754 Sdel_0385 Sdel_0385 PF13534 4Fe-4S dicluster domain Sdel_0387 PF08797 HIRAN domain Sdel_0388 PF07690 Major Facilitator Superfamily Sdel_0389 PF02810 SEC-C motif Sdel_0390 PF00027 Cyclic nucleotide-binding domain Sdel_0390 PF13545 Crp-like helix-turn-helix domain Sdel_0391 PF00011 Hsp20/alpha crystallin family Sdel_0392 PF00990 GGDEF domain Sdel_0392 PF03924 CHASE domain Sdel_0392 PF08447 PAS fold Sdel_0392 PF13188 PAS domain Sdel_0393 PF01790 Sdel_0393 Sdel_0394 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit Sdel_0395 PF00890 FAD binding domain Sdel_0395 PF02910 Fumarate reductase flavoprotein C-term Sdel_0396 PF13085 2Fe-2S iron-sulfur cluster binding domain Sdel_0396 PF13183 4Fe-4S dicluster domain Sdel_0397 PF00350 Dynamin family Sdel_0398 PF00350 Dynamin family Sdel_0399 PF01594 Sdel_0399 Sdel_0400 PF05491 Holliday junction DNA helicase ruvB C-terminus Sdel_0400 PF05496 Holliday junction DNA helicase ruvB N-terminus Sdel_0401 PF02548 Ketopantoate hydroxymethyltransferase Sdel_0402 PF01627 Hpt domain Sdel_0403 PF00290 Tryptophan synthase alpha chain Sdel_0404 PF05494 Toluene tolerance, Ttg2 Sdel_0405 PF04333 Sdel_0405 Sdel_0406 PF00318 Ribosomal protein S2 Sdel_0407 PF00889 Elongation factor TS Sdel_0408 PF00005 ABC transporter Sdel_0409 PF01311 Sdel_0409 Sdel_0411 PF00625 Guanylate kinase Sdel_0412 PF02416 mttA/Hcf106 family Sdel_0413 PF00750 tRNA synthetases class I (R) Sdel_0413 PF03485 Arginyl tRNA synthetase N terminal domain Sdel_0413 PF05746 DALR anticodon binding domain Sdel_0414 PF01223 DNA/RNA non-specific endonuclease Sdel_0415 PF00990 GGDEF domain Sdel_0417 PF07715 TonB-dependent Receptor Plug Domain Sdel_0418 PF01475 Ferric uptake regulator family Sdel_0419 PF00034 Cytochrome c Sdel_0419 PF03150 Di-haem cytochrome c peroxidase Sdel_0420 PF01467 Cytidylyltransferase Sdel_0420 PF02410 Oligomerisation domain Sdel_0421 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain Sdel_0421 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain Sdel_0422 PF00162 Phosphoglycerate kinase Sdel_0423 PF00121 Triosephosphate isomerase Sdel_0424 PF13561 Enoyl-(Acyl carrier protein) reductase Sdel_0425 PF00528 Binding-protein-dependent transport system inner membrane component Sdel_0427 PF08529 NusA N-terminal domain Sdel_0427 PF13184 NusA-like KH domain Sdel_0429 PF00919 Uncharacterized protein family UPF0004 Sdel_0429 PF01938 TRAM domain Sdel_0429 PF04055 Radical SAM superfamily Sdel_0430 PF04028 Sdel_0430 Sdel_0434 PF01171 PP-loop family Sdel_0435 PF00919 Uncharacterized protein family UPF0004 Sdel_0435 PF04055 Radical SAM superfamily Sdel_0436 PF02569 Pantoate-beta-alanine ligase Sdel_0437 PF00472 RF-1 domain Sdel_0437 PF03462 PCRF domain Sdel_0440 PF07264 Etoposide-induced protein 2 Sdel_0441 PF00710 Asparaginase Sdel_0442 PF13177 DNA polymerase III, delta subunit Sdel_0443 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Sdel_0443 PF07497 Rho termination factor, RNA-binding domain Sdel_0443 PF07498 Rho termination factor, N-terminal domain Sdel_0444 PF01255 Putative undecaprenyl diphosphate synthase Sdel_0445 PF06808 Sdel_0445 Sdel_0446 PF04290 Sdel_0446 Sdel_0447 PF03480 Bacterial extracellular solute-binding protein, family 7 Sdel_0448 PF00072 Response regulator receiver domain Sdel_0448 PF00486 Transcriptional regulatory protein, C terminal Sdel_0449 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Sdel_0449 PF08269 Cache domain Sdel_0451 PF00589 Phage integrase family Sdel_0451 PF13356 Domain of unknown function (DUF4102) Sdel_0451 PF14659 Phage integrase, N-terminal SAM-like domain Sdel_0453 PF12728 Helix-turn-helix domain Sdel_0454 PF04851 Type III restriction enzyme, res subunit Sdel_0455 PF01381 Helix-turn-helix Sdel_0460 PF02661 Fic/DOC family Sdel_0461 PF01957 NfeD-like C-terminal, partner-binding Sdel_0462 PF01145 SPFH domain / Band 7 family Sdel_0463 PF02624 YcaO-like family Sdel_0464 PF02447 Sdel_0464 Sdel_0465 PF00270 DEAD/DEAH box helicase Sdel_0465 PF00271 Helicase conserved C-terminal domain Sdel_0467 PF00563 EAL domain Sdel_0468 PF03063 Prismane/CO dehydrogenase family Sdel_0469 PF03573 outer membrane porin, OprD family Sdel_0470 PF01402 Ribbon-helix-helix protein, copG family Sdel_0471 PF05016 Plasmid stabilisation system protein Sdel_0473 PF05016 Plasmid stabilisation system protein Sdel_0474 PF03573 outer membrane porin, OprD family Sdel_0475 PF13458 Periplasmic binding protein Sdel_0476 PF02653 Sdel_0476 Sdel_0477 PF02653 Sdel_0477 Sdel_0478 PF00005 ABC transporter Sdel_0478 PF12399 Branched-chain amino acid ATP-binding cassette transporter Sdel_0479 PF00005 ABC transporter Sdel_0480 PF01578 Sdel_0480 Sdel_0480 PF05140 Sdel_0480 Sdel_0482 PF02464 Competence-damaged protein Sdel_0483 PF00133 tRNA synthetases class I (I, L, M and V) Sdel_0483 PF08264 Anticodon-binding domain of tRNA Sdel_0485 PF01425 Amidase Sdel_0486 PF00478 IMP dehydrogenase / GMP reductase domain Sdel_0486 PF00571 CBS domain Sdel_0487 PF00561 alpha/beta hydrolase fold Sdel_0488 PF02609 Exonuclease VII small subunit Sdel_0489 PF00795 Carbon-nitrogen hydrolase Sdel_0490 PF00899 ThiF family Sdel_0491 PF00155 Aminotransferase class I and II Sdel_0492 PF01225 Mur ligase family, catalytic domain Sdel_0492 PF02875 Mur ligase family, glutamate ligase domain Sdel_0492 PF08245 Mur ligase middle domain Sdel_0494 PF00488 MutS domain V Sdel_0494 PF01713 Smr domain Sdel_0495 PF01546 Peptidase family M20/M25/M40 Sdel_0495 PF07687 Peptidase dimerisation domain Sdel_0496 PF01042 Endoribonuclease L-PSP Sdel_0497 PF06039 Sdel_0497 Sdel_0498 PF13489 Methyltransferase domain Sdel_0500 PF13690 Chemotaxis phosphatase CheX Sdel_0501 PF00224 Pyruvate kinase, barrel domain Sdel_0501 PF02887 Pyruvate kinase, alpha/beta domain Sdel_0502 PF00829 Ribosomal prokaryotic L21 protein Sdel_0503 PF01016 Ribosomal L27 protein Sdel_0504 PF01018 GTP1/OBG Sdel_0504 PF01926 50S ribosome-binding GTPase Sdel_0505 PF00696 Amino acid kinase family Sdel_0506 PF00551 Formyl transferase Sdel_0506 PF02911 Formyl transferase, C-terminal domain Sdel_0507 PF03099 Biotin/lipoate A/B protein ligase family Sdel_0508 PF13614 AAA domain Sdel_0509 PF02195 ParB-like nuclease domain Sdel_0510 PF00430 ATP synthase B/B' CF(0) Sdel_0511 PF00430 ATP synthase B/B' CF(0) Sdel_0512 PF00213 ATP synthase delta (OSCP) subunit Sdel_0513 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Sdel_0513 PF00306 ATP synthase alpha/beta chain, C terminal domain Sdel_0513 PF02874 ATP synthase alpha/beta family, beta-barrel domain Sdel_0514 PF00231 ATP synthase Sdel_0515 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Sdel_0515 PF02874 ATP synthase alpha/beta family, beta-barrel domain Sdel_0516 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain Sdel_0517 PF01618 Sdel_0517 Sdel_0518 PF02472 Biopolymer transport protein ExbD/TolR Sdel_0519 PF13103 TonB C terminal Sdel_0520 PF07676 WD40-like Beta Propeller Repeat Sdel_0521 PF00691 OmpA family Sdel_0522 PF13432 Tetratricopeptide repeat Sdel_0523 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase Sdel_0525 PF00698 Acyl transferase domain Sdel_0526 PF01048 Phosphorylase superfamily Sdel_0527 PF01171 PP-loop family Sdel_0528 PF13114 Sdel_0528 Sdel_0529 PF00310 Glutamine amidotransferases class-II Sdel_0529 PF01493 GXGXG motif Sdel_0529 PF01645 Conserved region in glutamate synthase Sdel_0529 PF04898 Glutamate synthase central domain Sdel_0530 PF07992 Pyridine nucleotide-disulphide oxidoreductase Sdel_0530 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Sdel_0531 PF00459 Inositol monophosphatase family Sdel_0532 PF01039 Carboxyl transferase domain Sdel_0533 PF02590 Predicted SPOUT methyltransferase Sdel_0534 PF01258 Prokaryotic dksA/traR C4-type zinc finger Sdel_0536 PF01207 Dihydrouridine synthase (Dus) Sdel_0538 PF03547 Sdel_0538 Sdel_0540 PF01052 Surface presentation of antigens (SPOA) Sdel_0541 PF03372 Endonuclease/Exonuclease/phosphatase family Sdel_0544 PF01047 MarR family Sdel_0545 PF07883 Cupin domain Sdel_0547 PF04365 Protein of unknown function (DUF497) Sdel_0550 PF01964 ThiC family Sdel_0550 PF13667 ThiC-associated domain Sdel_0551 PF13690 Chemotaxis phosphatase CheX Sdel_0552 PF00324 Amino acid permease Sdel_0553 PF01925 Sdel_0553 Sdel_0554 PF00005 ABC transporter Sdel_0555 PF00375 Sodium:dicarboxylate symporter family Sdel_0556 PF00375 Sodium:dicarboxylate symporter family Sdel_0557 PF08668 HDOD domain Sdel_0558 PF00476 DNA polymerase family A Sdel_0558 PF01367 5'-3' exonuclease, C-terminal SAM fold Sdel_0558 PF01612 3'-5' exonuclease Sdel_0558 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain Sdel_0559 PF02659 Sdel_0559 Sdel_0560 PF13505 Outer membrane protein beta-barrel domain Sdel_0561 PF01863 Protein of unknown function DUF45 Sdel_0562 PF00226 DnaJ domain Sdel_0562 PF00684 DnaJ central domain Sdel_0562 PF01556 DnaJ C terminal domain Sdel_0563 PF07813 LTXXQ motif family protein Sdel_0564 PF00072 Response regulator receiver domain Sdel_0564 PF00486 Transcriptional regulatory protein, C terminal Sdel_0565 PF00672 HAMP domain Sdel_0565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Sdel_0566 PF02132 RecR protein Sdel_0567 PF00465 Iron-containing alcohol dehydrogenase Sdel_0568 PF00563 EAL domain Sdel_0568 PF00990 GGDEF domain Sdel_0569 PF13453 Sdel_0569 Sdel_0570 PF00501 AMP-binding enzyme Sdel_0570 PF13193 AMP-binding enzyme C-terminal domain Sdel_0571 PF08501 Shikimate dehydrogenase substrate binding domain Sdel_0572 PF00425 chorismate binding enzyme Sdel_0572 PF04715 Anthranilate synthase component I, N terminal region Sdel_0573 PF05036 Sporulation related domain Sdel_0574 PF08966 Domain of unknown function (DUF1882) Sdel_0575 PF00464 Serine hydroxymethyltransferase Sdel_0576 PF00152 tRNA synthetases class II (D, K and N) Sdel_0576 PF01336 OB-fold nucleic acid binding domain Sdel_0577 PF01475 Ferric uptake regulator family Sdel_0578 PF02674 Sdel_0578 Sdel_0579 PF00990 GGDEF domain Sdel_0580 PF00437 Type II/IV secretion system protein Sdel_0581 PF02686 Glu-tRNAGln amidotransferase C subunit Sdel_0585 PF03309 Type III pantothenate kinase Sdel_0586 PF01634 ATP phosphoribosyltransferase Sdel_0587 PF00072 Response regulator receiver domain Sdel_0588 PF00072 Response regulator receiver domain Sdel_0588 PF00512 His Kinase A (phospho-acceptor) domain Sdel_0588 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Sdel_0588 PF08376 Nitrate and nitrite sensing Sdel_0591 PF01541 GIY-YIG catalytic domain Sdel_0591 PF02151 UvrB/uvrC motif Sdel_0591 PF08459 UvrC Helix-hairpin-helix N-terminal Sdel_0591 PF14520 Helix-hairpin-helix domain Sdel_0593 PF00890 FAD binding domain Sdel_0594 PF03600 Citrate transporter Sdel_0595 PF00117 Glutamine amidotransferase class-I Sdel_0595 PF00958 GMP synthase C terminal domain Sdel_0595 PF02540 NAD synthase Sdel_0596 PF02602 Uroporphyrinogen-III synthase HemD Sdel_0597 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain Sdel_0597 PF02843 Phosphoribosylglycinamide synthetase, C domain Sdel_0597 PF02844 Phosphoribosylglycinamide synthetase, N domain Sdel_0598 PF06271 Sdel_0598 Sdel_0599 PF04453 Organic solvent tolerance protein Sdel_0600 PF00013 KH domain Sdel_0600 PF00575 S1 RNA binding domain Sdel_0600 PF01138 3' exoribonuclease family, domain 1 Sdel_0600 PF03725 3' exoribonuclease family, domain 2 Sdel_0600 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain Sdel_0601 PF00137 ATP synthase subunit C Sdel_0603 PF04277 Sdel_0603 Sdel_0604 PF00364 Biotin-requiring enzyme Sdel_0604 PF00682 HMGL-like Sdel_0604 PF02436 Conserved carboxylase domain Sdel_0605 PF03977 Sdel_0605 Sdel_0606 PF01293 Phosphoenolpyruvate carboxykinase Sdel_0607 PF00206 Lyase Sdel_0607 PF14698 Argininosuccinate lyase C-terminal Sdel_0608 PF01230 HIT domain Sdel_0609 PF01409 tRNA synthetases class II core domain (F) Sdel_0609 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain Sdel_0610 PF01588 Putative tRNA binding domain Sdel_0610 PF03147 Ferredoxin-fold anticodon binding domain Sdel_0610 PF03484 tRNA synthetase B5 domain Sdel_0611 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) Sdel_0612 PF02401 LytB protein Sdel_0613 PF00575 S1 RNA binding domain Sdel_0615 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Sdel_0615 PF01842 ACT domain Sdel_0615 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Sdel_0617 PF02321 Outer membrane efflux protein Sdel_0618 PF16576 Sdel_0618 Sdel_0619 PF00873 AcrB/AcrD/AcrF family Sdel_0620 PF00873 AcrB/AcrD/AcrF family Sdel_0622 PF01132 Elongation factor P (EF-P) OB domain Sdel_0622 PF08207 Elongation factor P (EF-P) KOW-like domain Sdel_0622 PF09285 Elongation factor P, C-terminal Sdel_0623 PF01965 DJ-1/PfpI family Sdel_0624 PF00488 MutS domain V Sdel_0624 PF01624 MutS domain I Sdel_0624 PF05192 MutS domain III Sdel_0625 PF11026 Sdel_0625 Sdel_0626 PF13509 S1 domain Sdel_0627 PF03486 HI0933-like protein Sdel_0628 PF03653 Sdel_0628 Sdel_0629 PF04055 Radical SAM superfamily Sdel_0630 PF10116 Sdel_0630 Sdel_0631 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Sdel_0631 PF17201 Sdel_0631 Sdel_0632 PF02811 PHP domain Sdel_0632 PF07733 Bacterial DNA polymerase III alpha subunit Sdel_0632 PF14579 Helix-hairpin-helix motif Sdel_0633 PF00512 His Kinase A (phospho-acceptor) domain Sdel_0633 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Sdel_0634 PF00266 Aminotransferase class-V Sdel_0635 PF02386 Cation transport protein Sdel_0636 PF02254 TrkA-N domain Sdel_0638 PF01098 Sdel_0638 Sdel_0639 PF00849 RNA pseudouridylate synthase Sdel_0641 PF02390 Putative methyltransferase Sdel_0642 PF00005 ABC transporter Sdel_0644 PF01551 Peptidase family M23 Sdel_0645 PF00696 Amino acid kinase family Sdel_0646 PF01192 RNA polymerase Rpb6 Sdel_0647 PF02824 TGS domain Sdel_0647 PF04607 Region found in RelA / SpoT proteins Sdel_0647 PF13328 HD domain Sdel_0648 PF00579 tRNA synthetases class I (W and Y) Sdel_0648 PF01479 S4 domain Sdel_0649 PF03060 Nitronate monooxygenase Sdel_0650 PF01520 N-acetylmuramoyl-L-alanine amidase Sdel_0651 PF00994 Probable molybdopterin binding domain Sdel_0652 PF00406 Adenylate kinase Sdel_0653 PF00152 tRNA synthetases class II (D, K and N) Sdel_0653 PF01336 OB-fold nucleic acid binding domain Sdel_0653 PF02938 GAD domain Sdel_0655 PF00990 GGDEF domain Sdel_0656 PF03923 Sdel_0656 Sdel_0657 PF01513 ATP-NAD kinase Sdel_0658 PF02463 RecF/RecN/SMC N terminal domain Sdel_0659 PF00072 Response regulator receiver domain Sdel_0659 PF00990 GGDEF domain Sdel_0660 PF01026 TatD related DNase Sdel_0661 PF01464 Transglycosylase SLT domain Sdel_0661 PF01476 LysM domain Sdel_0662 PF03330 Rare lipoprotein A (RlpA)-like double-psi beta-barrel Sdel_0662 PF05036 Sporulation related domain Sdel_0663 PF00475 Imidazoleglycerol-phosphate dehydratase Sdel_0664 PF08282 haloacid dehalogenase-like hydrolase Sdel_0665 PF06835 Lipopolysaccharide-assembly, LptC-related Sdel_0666 PF03968 OstA-like protein Sdel_0667 PF01926 50S ribosome-binding GTPase Sdel_0668 PF00583 Acetyltransferase (GNAT) family Sdel_0670 PF00905 Penicillin binding protein transpeptidase domain Sdel_0670 PF03717 Penicillin-binding Protein dimerisation domain Sdel_0671 PF02130 Uncharacterized protein family UPF0054 Sdel_0673 PF00133 tRNA synthetases class I (I, L, M and V) Sdel_0673 PF01588 Putative tRNA binding domain Sdel_0673 PF09334 tRNA synthetases class I (M) Sdel_0675 PF00316 Fructose-1-6-bisphosphatase Sdel_0676 PF03205 Molybdopterin guanine dinucleotide synthesis protein B Sdel_0678 PF01464 Transglycosylase SLT domain Sdel_0679 PF02325 Sdel_0679 Sdel_0680 PF00749 tRNA synthetases class I (E and Q), catalytic domain Sdel_0681 PF00749 tRNA synthetases class I (E and Q), catalytic domain Sdel_0681 PF02637 GatB domain Sdel_0681 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain Sdel_0684 PF13546 Sdel_0684 Sdel_0685 PF00072 Response regulator receiver domain Sdel_0685 PF00486 Transcriptional regulatory protein, C terminal Sdel_0686 PF00939 Sodium:sulfate symporter transmembrane region Sdel_0687 PF00497 Bacterial extracellular solute-binding proteins, family 3 Sdel_0687 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Sdel_0688 PF02743 Cache domain Sdel_0690 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB Sdel_0690 PF08479 POTRA domain, ShlB-type Sdel_0691 PF00027 Cyclic nucleotide-binding domain Sdel_0691 PF13545 Crp-like helix-turn-helix domain Sdel_0694 PF00005 ABC transporter Sdel_0695 PF02687 Sdel_0695 Sdel_0697 PF05573 NosL Sdel_0698 PF08238 Sel1 repeat Sdel_0699 PF01578 Sdel_0699 Sdel_0699 PF05140 Sdel_0699 Sdel_0700 PF03916 Sdel_0700 Sdel_0701 PF13247 4Fe-4S dicluster domain Sdel_0702 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase Sdel_0702 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase Sdel_0704 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Sdel_0704 PF11845 Sdel_0704 Sdel_0705 PF00072 Response regulator receiver domain Sdel_0705 PF00486 Transcriptional regulatory protein, C terminal Sdel_0706 PF03264 NapC/NirT cytochrome c family, N-terminal region Sdel_0707 PF02335 Cytochrome c552 Sdel_0708 PF01578 Sdel_0708 Sdel_0708 PF05140 Sdel_0708 Sdel_0710 PF00027 Cyclic nucleotide-binding domain Sdel_0710 PF13545 Crp-like helix-turn-helix domain Sdel_0711 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term Sdel_0713 PF04172 Sdel_0713 Sdel_0714 PF03788 Sdel_0714 Sdel_0715 PF05538 Sdel_0715 Sdel_0716 PF03544 Gram-negative bacterial TonB protein C-terminal Sdel_0717 PF02472 Biopolymer transport protein ExbD/TolR Sdel_0718 PF01618 Sdel_0718 Sdel_0720 PF12441 Sdel_0720 Sdel_0721 PF04221 RelB antitoxin Sdel_0724 PF00384 Molybdopterin oxidoreductase Sdel_0724 PF01568 Molydopterin dinucleotide binding domain Sdel_0724 PF04879 Molybdopterin oxidoreductase Fe4S4 domain Sdel_0724 PF10518 TAT (twin-arginine translocation) pathway signal sequence Sdel_0725 PF12838 4Fe-4S dicluster domain Sdel_0726 PF12801 Sdel_0726 Sdel_0726 PF13237 4Fe-4S dicluster domain Sdel_0727 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) Sdel_0728 PF00037 4Fe-4S binding domain Sdel_0730 PF03927 NapD protein Sdel_0731 PF01926 50S ribosome-binding GTPase Sdel_0731 PF06071 Protein of unknown function (DUF933) Sdel_0732 PF07661 Sdel_0732 Sdel_0733 PF00581 Rhodanese-like domain Sdel_0733 PF02943 Ferredoxin thioredoxin reductase catalytic beta chain Sdel_0734 PF03573 outer membrane porin, OprD family Sdel_0735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Sdel_0735 PF02743 Cache domain Sdel_0736 PF00072 Response regulator receiver domain Sdel_0736 PF00486 Transcriptional regulatory protein, C terminal Sdel_0738 PF00384 Molybdopterin oxidoreductase Sdel_0738 PF01568 Molydopterin dinucleotide binding domain Sdel_0740 PF00355 Rieske [2Fe-2S] domain Sdel_0741 PF00032 Cytochrome b(C-terminal)/b6/petD Sdel_0741 PF00033 Cytochrome b(N-terminal)/b6/petB Sdel_0742 PF00034 Cytochrome c Sdel_0743 PF00072 Response regulator receiver domain Sdel_0743 PF00486 Transcriptional regulatory protein, C terminal Sdel_0744 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Sdel_0744 PF04392 ABC transporter substrate binding protein Sdel_0745 PF01546 Peptidase family M20/M25/M40 Sdel_0745 PF07687 Peptidase dimerisation domain Sdel_0746 PF01546 Peptidase family M20/M25/M40 Sdel_0746 PF07687 Peptidase dimerisation domain Sdel_0747 PF03606 Sdel_0747 Sdel_0748 PF00072 Response regulator receiver domain Sdel_0748 PF00563 EAL domain Sdel_0748 PF13426 PAS domain Sdel_0749 PF02666 Sdel_0749 Sdel_0750 PF00270 DEAD/DEAH box helicase Sdel_0750 PF00271 Helicase conserved C-terminal domain Sdel_0750 PF03880 DbpA RNA binding domain Sdel_0751 PF13020 Sdel_0751 Sdel_0752 PF01709 Transcriptional regulator Sdel_0753 PF02589 Uncharacterised ACR, YkgG family COG1556 Sdel_0755 PF00118 TCP-1/cpn60 chaperonin family Sdel_0756 PF00166 Chaperonin 10 Kd subunit Sdel_0757 PF00589 Phage integrase family Sdel_0757 PF13356 Domain of unknown function (DUF4102) Sdel_0758 PF13546 Sdel_0758 Sdel_0763 PF04610 Sdel_0763 Sdel_0766 PF03432 Sdel_0766 Sdel_0768 PF13546 Sdel_0768 Sdel_0776 PF09907 Sdel_0776 Sdel_0778 PF01695 IstB-like ATP binding protein Sdel_0780 PF00665 Integrase core domain Sdel_0782 PF05016 Plasmid stabilisation system protein Sdel_0785 PF13173 AAA domain Sdel_0788 PF00665 Integrase core domain Sdel_0788 PF13384 Homeodomain-like domain Sdel_0789 PF05981 Sdel_0789 Sdel_0790 PF02321 Outer membrane efflux protein Sdel_0791 PF06035 Bacterial transglutaminase-like cysteine proteinase BTLCP Sdel_0792 PF00563 EAL domain Sdel_0792 PF00990 GGDEF domain Sdel_0792 PF16448 Sdel_0792 Sdel_0793 PF00005 ABC transporter Sdel_0793 PF00664 ABC transporter transmembrane region Sdel_0794 PF13437 HlyD family secretion protein Sdel_0794 PF13533 Biotin-lipoyl like Sdel_0795 PF00196 Bacterial regulatory proteins, luxR family Sdel_0798 PF16841 Sdel_0798 Sdel_0799 PF06738 Sdel_0799 Sdel_0800 PF12821 Sdel_0800 Sdel_0801 PF00122 E1-E2 ATPase Sdel_0801 PF00702 haloacid dehalogenase-like hydrolase Sdel_0802 PF01022 Bacterial regulatory protein, arsR family Sdel_0803 PF02613 Nitrate reductase delta subunit Sdel_0805 PF00384 Molybdopterin oxidoreductase Sdel_0805 PF04879 Molybdopterin oxidoreductase Fe4S4 domain Sdel_0806 PF00384 Molybdopterin oxidoreductase Sdel_0806 PF01568 Molydopterin dinucleotide binding domain Sdel_0807 PF13247 4Fe-4S dicluster domain Sdel_0808 PF01292 Prokaryotic cytochrome b561 Sdel_0809 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain Sdel_0809 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain Sdel_0810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Sdel_0810 PF03459 TOBE domain Sdel_0811 PF02641 Uncharacterized ACR, COG1993 Sdel_0812 PF02537 Sdel_0812 Sdel_0813 PF01258 Prokaryotic dksA/traR C4-type zinc finger Sdel_0813 PF02663 FmdE, Molybdenum formylmethanofuran dehydrogenase operon Sdel_0814 PF00005 ABC transporter Sdel_0815 PF01032 FecCD transport family Sdel_0816 PF01497 Periplasmic binding protein Sdel_0817 PF13649 Methyltransferase domain Sdel_0818 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Sdel_0819 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Sdel_0819 PF02743 Cache domain Sdel_0820 PF02581 Thiamine monophosphate synthase/TENI Sdel_0821 PF01757 Sdel_0821 Sdel_0823 PF01810 Sdel_0823 Sdel_0824 PF00892 EamA-like transporter family Sdel_0825 PF13472 GDSL-like Lipase/Acylhydrolase family Sdel_0827 PF00027 Cyclic nucleotide-binding domain Sdel_0827 PF00571 CBS domain Sdel_0827 PF03445 Sdel_0827 Sdel_0827 PF10335 Sdel_0827 Sdel_0828 PF00929 Exonuclease Sdel_0831 PF01717 Cobalamin-independent synthase, Catalytic domain Sdel_0831 PF08267 Cobalamin-independent synthase, N-terminal domain Sdel_0833 PF01435 Peptidase family M48 Sdel_0834 PF06821 Serine hydrolase Sdel_0835 PF01739 CheR methyltransferase, SAM binding domain Sdel_0836 PF01339 CheB methylesterase Sdel_0837 PF00883 Cytosol aminopeptidase family, catalytic domain Sdel_0837 PF02789 Cytosol aminopeptidase family, N-terminal domain Sdel_0838 PF09335 Sdel_0838 Sdel_0839 PF00291 Pyridoxal-phosphate dependent enzyme Sdel_0840 PF00156 Phosphoribosyl transferase domain Sdel_0842 PF02502 Ribose/Galactose Isomerase Sdel_0843 PF02163 Peptidase family M50 Sdel_0844 PF00717 Peptidase S24-like Sdel_0845 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain Sdel_0845 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain Sdel_0847 PF00202 Aminotransferase class-III Sdel_0850 PF04055 Radical SAM superfamily Sdel_0851 PF00675 Insulinase (Peptidase family M16) Sdel_0851 PF05193 Peptidase M16 inactive domain Sdel_0852 PF00270 DEAD/DEAH box helicase Sdel_0852 PF00271 Helicase conserved C-terminal domain Sdel_0853 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein Sdel_0853 PF16321 Sdel_0853 Sdel_0855 PF07963 Prokaryotic N-terminal methylation motif Sdel_0858 PF02623 FliW protein Sdel_0859 PF13525 Outer membrane lipoprotein Sdel_0860 PF00004 ATPase family associated with various cellular activities (AAA) Sdel_0860 PF02190 ATP-dependent protease La (LON) domain Sdel_0860 PF05362 Lon protease (S16) C-terminal proteolytic domain Sdel_0861 PF01084 Ribosomal protein S18 Sdel_0862 PF00436 Single-strand binding protein family Sdel_0863 PF01250 Ribosomal protein S6 Sdel_0864 PF06144 DNA polymerase III, delta subunit Sdel_0865 PF00773 RNB domain Sdel_0866 PF08668 HDOD domain Sdel_0867 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain Sdel_0867 PF07991 Acetohydroxy acid isomeroreductase, catalytic domain Sdel_0868 PF13614 AAA domain Sdel_0869 PF03776 Septum formation topological specificity factor MinE Sdel_0870 PF04748 Divergent polysaccharide deacetylase Sdel_0871 PF02481 DNA recombination-mediator protein A Sdel_0872 PF01925 Sdel_0872 Sdel_0873 PF03652 Uncharacterised protein family (UPF0081) Sdel_0874 PF03458 Sdel_0874 Sdel_0875 PF00202 Aminotransferase class-III Sdel_0876 PF02636 Putative S-adenosyl-L-methionine-dependent methyltransferase Sdel_0877 PF02597 ThiS family Sdel_0878 PF01648 4'-phosphopantetheinyl transferase superfamily Sdel_0879 PF03748 Sdel_0879 Sdel_0880 PF13481 AAA domain Sdel_0880 PF13541 Subunit ChlI of Mg-chelatase Sdel_0881 PF00448 SRP54-type protein, GTPase domain Sdel_0882 PF13905 Thioredoxin-like Sdel_0883 PF01812 5-formyltetrahydrofolate cyclo-ligase family Sdel_0884 PF00013 KH domain Sdel_0884 PF01966 HD domain Sdel_0884 PF12072 Sdel_0884 Sdel_0885 PF00005 ABC transporter Sdel_0885 PF00664 ABC transporter transmembrane region Sdel_0886 PF04366 Sdel_0886 Sdel_0887 PF09335 Sdel_0887 Sdel_0889 PF00717 Peptidase S24-like Sdel_0890 PF01758 Sodium Bile acid symporter family Sdel_0891 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD Sdel_0892 PF00072 Response regulator receiver domain Sdel_0892 PF00486 Transcriptional regulatory protein, C terminal Sdel_0893 PF00072 Response regulator receiver domain Sdel_0893 PF00563 EAL domain Sdel_0893 PF00990 GGDEF domain Sdel_0894 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Sdel_0895 PF08495 Sdel_0895 Sdel_0895 PF10442 Sdel_0895 Sdel_0896 PF04073 Aminoacyl-tRNA editing domain Sdel_0897 PF01881 CRISPR associated protein Cas6 Sdel_0899 PF01905 CRISPR-associated negative auto-regulator DevR/Csa2 Sdel_0900 PF09704 CRISPR-associated protein (Cas_Cas5) Sdel_0901 PF00270 DEAD/DEAH box helicase Sdel_0901 PF00271 Helicase conserved C-terminal domain Sdel_0901 PF01966 HD domain Sdel_0902 PF01930 Domain of unknown function DUF83 Sdel_0903 PF01867 CRISPR associated protein Cas1 Sdel_0904 PF09827 CRISPR associated protein Cas2 Sdel_0906 PF00925 GTP cyclohydrolase II Sdel_0906 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase Sdel_0907 PF00999 Sodium/hydrogen exchanger family Sdel_0907 PF02254 TrkA-N domain Sdel_0908 PF00929 Exonuclease Sdel_0912 PF00072 Response regulator receiver domain Sdel_0912 PF13487 HD domain Sdel_0913 PF00072 Response regulator receiver domain Sdel_0913 PF00497 Bacterial extracellular solute-binding proteins, family 3 Sdel_0913 PF00512 His Kinase A (phospho-acceptor) domain Sdel_0913 PF01627 Hpt domain Sdel_0913 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Sdel_0913 PF08447 PAS fold Sdel_0913 PF13426 PAS domain Sdel_0914 PF03796 DnaB-like helicase C terminal domain Sdel_0915 PF14284 Sdel_0915 Sdel_0916 PF14281 Sdel_0916 Sdel_0918 PF08279 HTH domain Sdel_0918 PF13280 Sdel_0918 Sdel_0919 PF02146 Sir2 family Sdel_0922 PF00665 Integrase core domain Sdel_0923 PF01695 IstB-like ATP binding protein Sdel_0925 PF00929 Exonuclease Sdel_0926 PF12728 Helix-turn-helix domain Sdel_0927 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain Sdel_0929 PF01909 Nucleotidyltransferase domain Sdel_0930 PF01934 Protein of unknown function DUF86 Sdel_0931 PF01381 Helix-turn-helix Sdel_0933 PF01695 IstB-like ATP binding protein Sdel_0934 PF00665 Integrase core domain Sdel_0937 PF08843 Nucleotidyl transferase of unknown function (DUF1814) Sdel_0939 PF13546 Sdel_0939 Sdel_0942 PF00665 Integrase core domain Sdel_0943 PF01695 IstB-like ATP binding protein Sdel_0945 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system Sdel_0947 PF00149 Calcineurin-like phosphoesterase Sdel_0948 PF13476 AAA domain Sdel_0949 PF13175 AAA ATPase domain Sdel_0951 PF11074 Sdel_0951 Sdel_0952 PF13280 Sdel_0952 Sdel_0956 PF12128 Sdel_0956 Sdel_0958 PF01966 HD domain Sdel_0958 PF13286 Phosphohydrolase-associated domain Sdel_0966 PF00589 Phage integrase family Sdel_0966 PF13102 Phage integrase SAM-like domain Sdel_0967 PF00216 Bacterial DNA-binding protein Sdel_0968 PF00669 Bacterial flagellin N-terminal helical region Sdel_0968 PF00700 Bacterial flagellin C-terminal helical region Sdel_0969 PF01580 FtsK/SpoIIIE family Sdel_0969 PF09397 Ftsk gamma domain Sdel_0969 PF13491 Sdel_0969 Sdel_0970 PF00330 Aconitase family (aconitate hydratase) Sdel_0970 PF06434 Aconitate hydratase 2 N-terminus Sdel_0970 PF11791 Aconitate B N-terminal domain Sdel_0972 PF00391 PEP-utilising enzyme, mobile domain Sdel_0972 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain Sdel_0972 PF02896 PEP-utilising enzyme, TIM barrel domain Sdel_0973 PF04973 Sdel_0973 Sdel_0974 PF01636 Phosphotransferase enzyme family Sdel_0975 PF01327 Polypeptide deformylase Sdel_0976 PF00440 Bacterial regulatory proteins, tetR family Sdel_0977 PF02321 Outer membrane efflux protein Sdel_0978 PF16576 Sdel_0978 Sdel_0979 PF00873 AcrB/AcrD/AcrF family Sdel_0982 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Sdel_0982 PF08495 Sdel_0982 Sdel_0982 PF10442 Sdel_0982 Sdel_0983 PF13437 HlyD family secretion protein Sdel_0983 PF13533 Biotin-lipoyl like Sdel_0984 PF00005 ABC transporter Sdel_0984 PF00664 ABC transporter transmembrane region Sdel_0984 PF03412 Peptidase C39 family Sdel_0985 PF02321 Outer membrane efflux protein Sdel_0986 PF00353 Hemolysin-type calcium-binding repeat (2 copies) Sdel_0986 PF06594 Sdel_0986 Sdel_0989 PF12796 Ankyrin repeats (3 copies) Sdel_0991 PF00353 Hemolysin-type calcium-binding repeat (2 copies) Sdel_0994 PF00353 Hemolysin-type calcium-binding repeat (2 copies) Sdel_0997 PF00353 Hemolysin-type calcium-binding repeat (2 copies) Sdel_1000 PF06594 Sdel_1000 Sdel_1001 PF00535 Glycosyl transferase family 2 Sdel_1004 PF01695 IstB-like ATP binding protein Sdel_1007 PF01695 IstB-like ATP binding protein Sdel_1008 PF00665 Integrase core domain Sdel_1013 PF08843 Nucleotidyl transferase of unknown function (DUF1814) Sdel_1014 PF00291 Pyridoxal-phosphate dependent enzyme Sdel_1015 PF13380 CoA binding domain Sdel_1016 PF05958 tRNA (Uracil-5-)-methyltransferase Sdel_1018 PF02310 B12 binding domain Sdel_1018 PF04055 Radical SAM superfamily Sdel_1018 PF13311 Sdel_1018 Sdel_1020 PF04376 Sdel_1020 Sdel_1020 PF04377 Sdel_1020 Sdel_1021 PF00226 DnaJ domain Sdel_1022 PF00309 Sdel_1022 Sdel_1022 PF04552 Sigma-54, DNA binding domain Sdel_1022 PF04963 Sigma-54 factor, core binding domain Sdel_1023 PF00005 ABC transporter Sdel_1024 PF02367 Uncharacterised P-loop hydrolase UPF0079 Sdel_1025 PF00591 Glycosyl transferase family, a/b domain Sdel_1025 PF02885 Glycosyl transferase family, helical bundle domain Sdel_1026 PF01479 S4 domain Sdel_1027 PF00764 Arginosuccinate synthase Sdel_1028 PF00581 Rhodanese-like domain Sdel_1029 PF01281 Ribosomal protein L9, N-terminal domain Sdel_1029 PF03948 Ribosomal protein L9, C-terminal domain Sdel_1030 PF00227 Proteasome subunit Sdel_1031 PF07724 AAA domain (Cdc48 subfamily) Sdel_1031 PF10431 C-terminal, D2-small domain, of ClpB protein Sdel_1032 PF01926 50S ribosome-binding GTPase Sdel_1032 PF07650 KH domain Sdel_1036 PF00263 Sdel_1036 Sdel_1037 PF13401 AAA domain Sdel_1038 PF12895 Anaphase-promoting complex, cyclosome, subunit 3 Sdel_1039 PF00437 Type II/IV secretion system protein Sdel_1039 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain Sdel_1040 PF00482 Type II secretion system (T2SS), protein F Sdel_1042 PF02107 Sdel_1042 Sdel_1043 PF09424 Yqey-like protein Sdel_1044 PF00871 Acetokinase family Sdel_1045 PF01515 Phosphate acetyl/butaryl transferase Sdel_1045 PF07085 DRTGG domain Sdel_1045 PF13500 AAA domain Sdel_1046 PF08245 Mur ligase middle domain Sdel_1047 PF00708 Acylphosphatase Sdel_1048 PF12697 Alpha/beta hydrolase family Sdel_1049 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system Sdel_1050 PF01820 D-ala D-ala ligase N-terminus Sdel_1050 PF07478 D-ala D-ala ligase C-terminus Sdel_1051 PF01330 RuvA N terminal domain Sdel_1051 PF07499 RuvA, C-terminal domain Sdel_1051 PF14520 Helix-hairpin-helix domain Sdel_1052 PF03961 Sdel_1052 Sdel_1053 PF03023 Sdel_1053 Sdel_1054 PF01406 tRNA synthetases class I (C) catalytic domain Sdel_1055 PF00005 ABC transporter Sdel_1055 PF00664 ABC transporter transmembrane region Sdel_1056 PF01180 Dihydroorotate dehydrogenase Sdel_1057 PF00675 Insulinase (Peptidase family M16) Sdel_1057 PF05193 Peptidase M16 inactive domain Sdel_1058 PF00701 Dihydrodipicolinate synthetase family Sdel_1059 PF13561 Enoyl-(Acyl carrier protein) reductase Sdel_1060 PF01066 CDP-alcohol phosphatidyltransferase Sdel_1061 PF02163 Peptidase family M50 Sdel_1061 PF13180 PDZ domain Sdel_1062 PF01168 Alanine racemase, N-terminal domain Sdel_1063 PF00497 Bacterial extracellular solute-binding proteins, family 3 Sdel_1063 PF00990 GGDEF domain Sdel_1064 PF08901 Sdel_1064 Sdel_1066 PF01914 Sdel_1066 Sdel_1067 PF00375 Sodium:dicarboxylate symporter family Sdel_1068 PF03553 Sdel_1068 Sdel_1068 PF13726 Sdel_1068 Sdel_1069 PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase Sdel_1069 PF09363 XFP C-terminal domain Sdel_1069 PF09364 XFP N-terminal domain Sdel_1070 PF01638 HxlR-like helix-turn-helix Sdel_1071 PF02525 Flavodoxin-like fold Sdel_1072 PF00881 Nitroreductase family Sdel_1073 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Sdel_1073 PF02743 Cache domain Sdel_1075 PF01909 Nucleotidyltransferase domain Sdel_1076 PF01934 Protein of unknown function DUF86 Sdel_1079 PF00575 S1 RNA binding domain Sdel_1079 PF09371 Tex-like protein N-terminal domain Sdel_1079 PF12836 Helix-hairpin-helix motif Sdel_1079 PF16921 Sdel_1079 Sdel_1081 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase Sdel_1082 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Sdel_1083 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg Sdel_1083 PF17147 Sdel_1083 Sdel_1084 PF12838 4Fe-4S dicluster domain Sdel_1085 PF00403 Heavy-metal-associated domain Sdel_1086 PF00549 CoA-ligase Sdel_1086 PF02629 CoA binding domain Sdel_1087 PF00549 CoA-ligase Sdel_1087 PF08442 ATP-grasp domain Sdel_1088 PF00056 lactate/malate dehydrogenase, NAD binding domain Sdel_1088 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain Sdel_1089 PF03971 Monomeric isocitrate dehydrogenase Sdel_1090 PF02618 YceG-like family Sdel_1091 PF13109 Sdel_1091 Sdel_1091 PF13116 Sdel_1091 Sdel_1092 PF13419 Haloacid dehalogenase-like hydrolase Sdel_1093 PF13420 Acetyltransferase (GNAT) domain Sdel_1094 PF01155 Hydrogenase expression/synthesis hypA family Sdel_1095 PF00586 AIR synthase related protein, N-terminal domain Sdel_1095 PF02769 AIR synthase related protein, C-terminal domain Sdel_1096 PF01924 Hydrogenase formation hypA family Sdel_1097 PF01455 HupF/HypC family Sdel_1098 PF02492 CobW/HypB/UreG, nucleotide-binding domain Sdel_1100 PF01402 Ribbon-helix-helix protein, copG family Sdel_1100 PF08753 NikR C terminal nickel binding domain Sdel_1101 PF00708 Acylphosphatase Sdel_1101 PF01300 Telomere recombination Sdel_1101 PF07503 HypF finger Sdel_1103 PF01750 Hydrogenase maturation protease Sdel_1104 PF01292 Prokaryotic cytochrome b561 Sdel_1105 PF00374 Nickel-dependent hydrogenase Sdel_1106 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit Sdel_1106 PF10518 TAT (twin-arginine translocation) pathway signal sequence Sdel_1106 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal Sdel_1108 PF00342 Phosphoglucose isomerase Sdel_1109 PF04055 Radical SAM superfamily Sdel_1109 PF08497 Sdel_1109 Sdel_1112 PF00589 Phage integrase family Sdel_1112 PF14659 Phage integrase, N-terminal SAM-like domain Sdel_1116 PF11171 Sdel_1116 Sdel_1119 PF07275 Antirestriction protein (ArdA) Sdel_1120 PF13505 Outer membrane protein beta-barrel domain Sdel_1121 PF01381 Helix-turn-helix Sdel_1122 PF00813 Sdel_1122 Sdel_1123 PF00132 Bacterial transferase hexapeptide (six repeats) Sdel_1123 PF00483 Nucleotidyl transferase Sdel_1124 PF02441 Flavoprotein Sdel_1124 PF04127 DNA / pantothenate metabolism flavoprotein Sdel_1126 PF01478 Type IV leader peptidase family Sdel_1126 PF06750 Sdel_1126 Sdel_1127 PF03739 Sdel_1127 Sdel_1128 PF01416 tRNA pseudouridine synthase Sdel_1129 PF00933 Glycosyl hydrolase family 3 N terminal domain Sdel_1130 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus Sdel_1130 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus Sdel_1131 PF02637 GatB domain Sdel_1131 PF02934 GatB/GatE catalytic domain Sdel_1132 PF02581 Thiamine monophosphate synthase/TENI Sdel_1134 PF00119 ATP synthase A chain Sdel_1135 PF01361 Tautomerase enzyme Sdel_1136 PF00916 Sdel_1136 Sdel_1136 PF01740 STAS domain Sdel_1137 PF09674 Sdel_1137 Sdel_1138 PF00528 Binding-protein-dependent transport system inner membrane component Sdel_1139 PF00460 Flagella basal body rod protein Sdel_1139 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Sdel_1141 PF04316 Anti-sigma-28 factor, FlgM Sdel_1142 PF10135 Sdel_1142 Sdel_1143 PF02119 Sdel_1143 Sdel_1144 PF03602 Conserved hypothetical protein 95 Sdel_1146 PF03646 FlaG protein Sdel_1147 PF02465 Sdel_1147 Sdel_1147 PF07195 Sdel_1147 Sdel_1147 PF07196 Flagellin hook IN motif Sdel_1148 PF02561 Flagellar protein FliS Sdel_1150 PF04463 Sdel_1150 Sdel_1150 PF08349 Sdel_1150 Sdel_1151 PF00875 DNA photolyase Sdel_1151 PF03441 FAD binding domain of DNA photolyase Sdel_1153 PF03109 Sdel_1153 Sdel_1154 PF00881 Nitroreductase family Sdel_1156 PF13566 Sdel_1156 Sdel_1157 PF00465 Iron-containing alcohol dehydrogenase Sdel_1159 PF13546 Sdel_1159 Sdel_1160 PF07690 Major Facilitator Superfamily Sdel_1161 PF07883 Cupin domain Sdel_1162 PF00326 Prolyl oligopeptidase family Sdel_1163 PF06719 Sdel_1163 Sdel_1163 PF12833 Helix-turn-helix domain Sdel_1164 PF02321 Outer membrane efflux protein Sdel_1165 PF00873 AcrB/AcrD/AcrF family Sdel_1166 PF16576 Sdel_1166 Sdel_1167 PF00440 Bacterial regulatory proteins, tetR family Sdel_1167 PF14246 AefR-like transcriptional repressor, C-terminal region Sdel_1168 PF01618 Sdel_1168 Sdel_1169 PF00691 OmpA family Sdel_1169 PF13677 Sdel_1169 Sdel_1170 PF00005 ABC transporter Sdel_1170 PF12848 ABC transporter Sdel_1172 PF01625 Peptide methionine sulfoxide reductase Sdel_1173 PF12706 Beta-lactamase superfamily domain Sdel_1174 PF02535 Sdel_1174 Sdel_1175 PF02110 Hydroxyethylthiazole kinase family Sdel_1176 PF08543 Phosphomethylpyrimidine kinase Sdel_1177 PF00999 Sodium/hydrogen exchanger family Sdel_1178 PF00710 Asparaginase Sdel_1179 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Sdel_1180 PF00072 Response regulator receiver domain Sdel_1180 PF00486 Transcriptional regulatory protein, C terminal Sdel_1181 PF01142 tRNA pseudouridine synthase D (TruD) Sdel_1182 PF00586 AIR synthase related protein, N-terminal domain Sdel_1183 PF13085 2Fe-2S iron-sulfur cluster binding domain Sdel_1185 PF01880 Desulfoferrodoxin Sdel_1186 PF02554 Sdel_1186 Sdel_1186 PF13722 Sdel_1186 Sdel_1187 PF04328 Sdel_1187 Sdel_1188 PF02492 CobW/HypB/UreG, nucleotide-binding domain Sdel_1188 PF07683 Cobalamin synthesis protein cobW C-terminal domain Sdel_1189 PF00155 Aminotransferase class I and II Sdel_1191 PF13036 Protein of unknown function (DUF3897) Sdel_1192 PF07233 Protein of unknown function (DUF1425) Sdel_1194 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit Sdel_1195 PF12838 4Fe-4S dicluster domain Sdel_1196 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit Sdel_1197 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit Sdel_1197 PF00374 Nickel-dependent hydrogenase Sdel_1198 PF13247 4Fe-4S dicluster domain Sdel_1199 PF01155 Hydrogenase expression/synthesis hypA family Sdel_1200 PF07992 Pyridine nucleotide-disulphide oxidoreductase Sdel_1200 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Sdel_1201 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Sdel_1201 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Sdel_1202 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Sdel_1205 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Sdel_1205 PF02743 Cache domain Sdel_1207 PF01909 Nucleotidyltransferase domain Sdel_1208 PF01934 Protein of unknown function DUF86 Sdel_1209 PF13783 Sdel_1209 Sdel_1210 PF01063 Aminotransferase class IV Sdel_1211 PF00990 GGDEF domain Sdel_1213 PF01863 Protein of unknown function DUF45 Sdel_1214 PF05235 CHAD domain Sdel_1215 PF01823 MAC/Perforin domain Sdel_1216 PF01618 Sdel_1216 Sdel_1217 PF00691 OmpA family Sdel_1219 PF01594 Sdel_1219 Sdel_1220 PF16149 Sdel_1220 Sdel_1222 PF00005 ABC transporter Sdel_1223 PF00675 Insulinase (Peptidase family M16) Sdel_1223 PF05193 Peptidase M16 inactive domain Sdel_1224 PF07660 Secretin and TonB N terminus short domain Sdel_1224 PF07715 TonB-dependent Receptor Plug Domain Sdel_1225 PF04773 FecR protein Sdel_1225 PF16220 Sdel_1225 Sdel_1225 PF16344 Sdel_1225 Sdel_1226 PF04542 Sigma-70 region 2 Sdel_1226 PF08281 Sigma-70, region 4 Sdel_1227 PF00563 EAL domain Sdel_1227 PF00990 GGDEF domain Sdel_1228 PF01980 Uncharacterised protein family UPF0066 Sdel_1229 PF00210 Ferritin-like domain Sdel_1230 PF02574 Homocysteine S-methyltransferase Sdel_1231 PF10592 Sdel_1231 Sdel_1232 PF08309 Sdel_1232 Sdel_1232 PF12796 Ankyrin repeats (3 copies) Sdel_1233 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Sdel_1233 PF13426 PAS domain Sdel_1234 PF00072 Response regulator receiver domain Sdel_1234 PF00563 EAL domain Sdel_1234 PF00990 GGDEF domain Sdel_1235 PF00072 Response regulator receiver domain Sdel_1235 PF00486 Transcriptional regulatory protein, C terminal Sdel_1236 PF03167 Uracil DNA glycosylase superfamily Sdel_1238 PF03061 Thioesterase superfamily Sdel_1239 PF00589 Phage integrase family Sdel_1239 PF14659 Phage integrase, N-terminal SAM-like domain Sdel_1242 PF01381 Helix-turn-helix Sdel_1245 PF01695 IstB-like ATP binding protein Sdel_1246 PF00665 Integrase core domain Sdel_1251 PF00535 Glycosyl transferase family 2 Sdel_1253 PF00589 Phage integrase family Sdel_1254 PF00665 Integrase core domain Sdel_1255 PF01695 IstB-like ATP binding protein Sdel_1257 PF01695 IstB-like ATP binding protein Sdel_1258 PF00665 Integrase core domain Sdel_1260 PF12625 Sdel_1260 Sdel_1260 PF12833 Helix-turn-helix domain Sdel_1262 PF00004 ATPase family associated with various cellular activities (AAA) Sdel_1262 PF01434 Peptidase family M41 Sdel_1263 PF00919 Uncharacterized protein family UPF0004 Sdel_1263 PF04055 Radical SAM superfamily Sdel_1264 PF00924 Mechanosensitive ion channel Sdel_1265 PF01761 3-dehydroquinate synthase Sdel_1266 PF02080 TrkA-C domain Sdel_1267 PF01702 Queuine tRNA-ribosyltransferase Sdel_1268 PF00589 Phage integrase family Sdel_1269 PF01544 CorA-like Mg2+ transporter protein Sdel_1270 PF00300 Histidine phosphatase superfamily (branch 1) Sdel_1272 PF00072 Response regulator receiver domain Sdel_1272 PF00486 Transcriptional regulatory protein, C terminal Sdel_1273 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Sdel_1273 PF04392 ABC transporter substrate binding protein Sdel_1273 PF13426 PAS domain Sdel_1274 PF00939 Sodium:sulfate symporter transmembrane region Sdel_1275 PF05681 Sdel_1275 Sdel_1276 PF05683 Fumarase C-terminus Sdel_1277 PF09861 Domain of unknown function (DUF2088) Sdel_1278 PF01969 Protein of unknown function DUF111 Sdel_1279 PF02540 NAD synthase Sdel_1280 PF00731 AIR carboxylase Sdel_1282 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) Sdel_1283 PF00994 Probable molybdopterin binding domain Sdel_1283 PF03453 MoeA N-terminal region (domain I and II) Sdel_1285 PF02441 Flavoprotein Sdel_1286 PF01467 Cytidylyltransferase Sdel_1287 PF02223 Thymidylate kinase Sdel_1288 PF03129 Anticodon binding domain Sdel_1288 PF13393 Histidyl-tRNA synthetase Sdel_1289 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain Sdel_1290 PF00132 Bacterial transferase hexapeptide (six repeats) Sdel_1291 PF00155 Aminotransferase class I and II Sdel_1292 PF07992 Pyridine nucleotide-disulphide oxidoreductase Sdel_1292 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Sdel_1294 PF00132 Bacterial transferase hexapeptide (six repeats) Sdel_1294 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD Sdel_1295 PF01842 ACT domain Sdel_1295 PF10369 Small subunit of acetolactate synthase Sdel_1296 PF00205 Thiamine pyrophosphate enzyme, central domain Sdel_1296 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Sdel_1296 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain Sdel_1297 PF02541 Ppx/GppA phosphatase family Sdel_1298 PF07992 Pyridine nucleotide-disulphide oxidoreductase Sdel_1301 PF01292 Prokaryotic cytochrome b561 Sdel_1301 PF09626 Dihaem cytochrome c Sdel_1302 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ Sdel_1303 PF04166 Pyridoxal phosphate biosynthetic protein PdxA Sdel_1304 PF00581 Rhodanese-like domain Sdel_1305 PF01230 HIT domain Sdel_1306 PF00218 Indole-3-glycerol phosphate synthase Sdel_1308 PF03692 Sdel_1308 Sdel_1309 PF05175 Methyltransferase small domain Sdel_1311 PF13738 Pyridine nucleotide-disulphide oxidoreductase Sdel_1312 PF00171 Aldehyde dehydrogenase family Sdel_1313 PF00005 ABC transporter Sdel_1314 PF09335 Sdel_1314 Sdel_1315 PF01474 Class-II DAHP synthetase family Sdel_1316 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Sdel_1319 PF02915 Rubrerythrin Sdel_1319 PF06397 Desulfoferrodoxin, N-terminal domain Sdel_1321 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase Sdel_1322 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain Sdel_1322 PF03900 Porphobilinogen deaminase, C-terminal domain Sdel_1324 PF04186 Sdel_1324 Sdel_1325 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) Sdel_1325 PF03129 Anticodon binding domain Sdel_1325 PF04073 Aminoacyl-tRNA editing domain Sdel_1326 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain Sdel_1326 PF01488 Shikimate / quinate 5-dehydrogenase Sdel_1326 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain Sdel_1327 PF00348 Polyprenyl synthetase Sdel_1329 PF09442 Domain of unknown function (DUF2018) Sdel_1330 PF01053 Cys/Met metabolism PLP-dependent enzyme Sdel_1331 PF02082 Transcriptional regulator Sdel_1332 PF00291 Pyridoxal-phosphate dependent enzyme Sdel_1333 PF00990 GGDEF domain Sdel_1334 PF00255 Glutathione peroxidase Sdel_1335 PF00133 tRNA synthetases class I (I, L, M and V) Sdel_1335 PF08264 Anticodon-binding domain of tRNA Sdel_1335 PF10458 Valyl tRNA synthetase tRNA binding arm Sdel_1336 PF00994 Probable molybdopterin binding domain Sdel_1337 PF00815 Histidinol dehydrogenase Sdel_1339 PF01116 Fructose-bisphosphate aldolase class-II Sdel_1340 PF13145 PPIC-type PPIASE domain Sdel_1341 PF00730 HhH-GPD superfamily base excision DNA repair protein Sdel_1342 PF00578 AhpC/TSA family Sdel_1343 PF01546 Peptidase family M20/M25/M40 Sdel_1345 PF08003 Protein of unknown function (DUF1698) Sdel_1347 PF00753 Metallo-beta-lactamase superfamily Sdel_1348 PF02540 NAD synthase Sdel_1349 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family Sdel_1350 PF02606 Tetraacyldisaccharide-1-P 4'-kinase Sdel_1351 PF00696 Amino acid kinase family Sdel_1352 PF00291 Pyridoxal-phosphate dependent enzyme Sdel_1352 PF14821 Threonine synthase N terminus Sdel_1353 PF02348 Cytidylyltransferase Sdel_1355 PF02683 Sdel_1355 Sdel_1355 PF11412 Disulphide bond corrector protein DsbC Sdel_1355 PF13899 Thioredoxin-like Sdel_1356 PF03976 Polyphosphate kinase 2 (PPK2) Sdel_1357 PF01966 HD domain Sdel_1358 PF00012 Hsp70 protein Sdel_1359 PF01025 GrpE Sdel_1363 PF00312 Ribosomal protein S15 Sdel_1364 PF02082 Transcriptional regulator Sdel_1365 PF00771 FHIPEP family Sdel_1368 PF13649 Methyltransferase domain Sdel_1369 PF01687 Riboflavin kinase Sdel_1369 PF06574 FAD synthetase Sdel_1370 PF01479 S4 domain Sdel_1370 PF01728 FtsJ-like methyltransferase Sdel_1371 PF00533 BRCA1 C Terminus (BRCT) domain Sdel_1371 PF01653 NAD-dependent DNA ligase adenylation domain Sdel_1371 PF03120 NAD-dependent DNA ligase OB-fold domain Sdel_1371 PF12826 Helix-hairpin-helix motif Sdel_1371 PF14520 Helix-hairpin-helix domain Sdel_1372 PF01925 Sdel_1372 Sdel_1374 PF00809 Pterin binding enzyme Sdel_1375 PF13177 DNA polymerase III, delta subunit Sdel_1376 PF12163 DNA replication regulator Sdel_1377 PF00696 Amino acid kinase family Sdel_1377 PF01842 ACT domain Sdel_1377 PF13840 ACT domain Sdel_1378 PF00293 NUDIX domain Sdel_1379 PF04055 Radical SAM superfamily Sdel_1380 PF00999 Sodium/hydrogen exchanger family Sdel_1380 PF02254 TrkA-N domain Sdel_1381 PF13411 MerR HTH family regulatory protein Sdel_1382 PF00226 DnaJ domain Sdel_1382 PF01556 DnaJ C terminal domain Sdel_1383 PF13180 PDZ domain Sdel_1383 PF13365 Trypsin-like peptidase domain Sdel_1384 PF00072 Response regulator receiver domain Sdel_1384 PF00486 Transcriptional regulatory protein, C terminal Sdel_1385 PF00672 HAMP domain Sdel_1385 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Sdel_1387 PF02687 Sdel_1387 Sdel_1388 PF00271 Helicase conserved C-terminal domain Sdel_1388 PF01043 SecA preprotein cross-linking domain Sdel_1388 PF02810 SEC-C motif Sdel_1388 PF07516 SecA Wing and Scaffold domain Sdel_1388 PF07517 SecA DEAD-like domain Sdel_1389 PF03548 Outer membrane lipoprotein carrier protein LolA Sdel_1390 PF06965 Na+/H+ antiporter 1 Sdel_1392 PF14804 Jag N-terminus Sdel_1393 PF02096 60Kd inner membrane protein Sdel_1393 PF14849 YidC periplasmic domain Sdel_1394 PF01809 Sdel_1394 Sdel_1396 PF00468 Ribosomal protein L34 Sdel_1400 PF00004 ATPase family associated with various cellular activities (AAA) Sdel_1400 PF02861 Clp amino terminal domain Sdel_1400 PF07724 AAA domain (Cdc48 subfamily) Sdel_1400 PF10431 C-terminal, D2-small domain, of ClpB protein Sdel_1401 PF03572 Peptidase family S41 Sdel_1401 PF13180 PDZ domain Sdel_1402 PF01259 SAICAR synthetase Sdel_1403 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase Sdel_1404 PF13507 CobB/CobQ-like glutamine amidotransferase domain Sdel_1406 PF01553 Acyltransferase Sdel_1407 PF00183 Hsp90 protein Sdel_1407 PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Sdel_1408 PF04471 Restriction endonuclease Sdel_1408 PF14338 Sdel_1408 Sdel_1409 PF03190 Protein of unknown function, DUF255 Sdel_1410 PF00580 UvrD/REP helicase N-terminal domain Sdel_1410 PF13361 UvrD-like helicase C-terminal domain Sdel_1412 PF12895 Anaphase-promoting complex, cyclosome, subunit 3 Sdel_1413 PF13401 AAA domain Sdel_1416 PF02689 Sdel_1416 Sdel_1416 PF05970 Sdel_1416 Sdel_1417 PF00877 NlpC/P60 family Sdel_1417 PF12912 NLPC_P60 stabilising domain, N term Sdel_1417 PF12913 SH3 domain of the SH3b1 type Sdel_1417 PF12914 SH3 domain of SH3b2 type Sdel_1417 PF13539 D-alanyl-D-alanine carboxypeptidase Sdel_1418 PF08410 Sdel_1418 Sdel_1420 PF13310 Sdel_1420 Sdel_1421 PF05940 Sdel_1421 Sdel_1422 PF02646 Sdel_1422 Sdel_1424 PF01795 MraW methylase family Sdel_1425 PF00202 Aminotransferase class-III Sdel_1426 PF13145 PPIC-type PPIASE domain Sdel_1426 PF13624 SurA N-terminal domain Sdel_1427 PF02491 SHS2 domain inserted in FTSA Sdel_1427 PF14450 Cell division protein FtsA Sdel_1428 PF00091 Tubulin/FtsZ family, GTPase domain Sdel_1428 PF12327 FtsZ family, C-terminal domain Sdel_1429 PF13664 Sdel_1429 Sdel_1430 PF05175 Methyltransferase small domain Sdel_1431 PF01435 Peptidase family M48 Sdel_1431 PF16491 Sdel_1431 Sdel_1432 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Sdel_1432 PF12729 Sdel_1432 Sdel_1433 PF00005 ABC transporter Sdel_1433 PF12848 ABC transporter Sdel_1433 PF16326 Sdel_1433 Sdel_1434 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Sdel_1435 PF01883 Domain of unknown function DUF59 Sdel_1438 PF01808 AICARFT/IMPCHase bienzyme Sdel_1438 PF02142 MGS-like domain Sdel_1439 PF02600 Disulfide bond formation protein DsbB Sdel_1440 PF13462 Thioredoxin Sdel_1441 PF03061 Thioesterase superfamily Sdel_1442 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Sdel_1442 PF13188 PAS domain Sdel_1443 PF00072 Response regulator receiver domain Sdel_1443 PF00486 Transcriptional regulatory protein, C terminal Sdel_1444 PF00890 FAD binding domain Sdel_1445 PF14537 Cytochrome c3 Sdel_1446 PF03264 NapC/NirT cytochrome c family, N-terminal region Sdel_1447 PF00155 Aminotransferase class I and II Sdel_1450 PF00586 AIR synthase related protein, N-terminal domain Sdel_1450 PF02769 AIR synthase related protein, C-terminal domain Sdel_1451 PF00563 EAL domain Sdel_1451 PF00990 GGDEF domain Sdel_1451 PF08447 PAS fold Sdel_1452 PF02416 mttA/Hcf106 family Sdel_1453 PF00902 Sec-independent protein translocase protein (TatC) Sdel_1454 PF02547 Queuosine biosynthesis protein Sdel_1455 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Sdel_1456 PF00753 Metallo-beta-lactamase superfamily Sdel_1456 PF07521 RNA-metabolising metallo-beta-lactamase Sdel_1456 PF10996 Beta-Casp domain Sdel_1457 PF00501 AMP-binding enzyme Sdel_1459 PF00593 TonB dependent receptor Sdel_1459 PF07715 TonB-dependent Receptor Plug Domain Sdel_1460 PF00512 His Kinase A (phospho-acceptor) domain Sdel_1460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Sdel_1460 PF13493 Domain of unknown function (DUF4118) Sdel_1461 PF00072 Response regulator receiver domain Sdel_1461 PF00486 Transcriptional regulatory protein, C terminal Sdel_1462 PF02386 Cation transport protein Sdel_1463 PF02254 TrkA-N domain Sdel_1464 PF01641 SelR domain Sdel_1465 PF00571 CBS domain Sdel_1465 PF01595 Sdel_1465 Sdel_1466 PF00300 Histidine phosphatase superfamily (branch 1) Sdel_1467 PF01966 HD domain Sdel_1467 PF12804 MobA-like NTP transferase domain Sdel_1468 PF02625 XdhC and CoxI family Sdel_1468 PF13478 XdhC Rossmann domain Sdel_1469 PF00501 AMP-binding enzyme Sdel_1470 PF04055 Radical SAM superfamily Sdel_1470 PF13353 4Fe-4S single cluster domain Sdel_1471 PF09719 Putative redox-active protein (C_GCAxxG_C_C) Sdel_1472 PF08241 Methyltransferase domain Sdel_1474 PF02754 Sdel_1474 Sdel_1474 PF13450 NAD(P)-binding Rossmann-like domain Sdel_1474 PF13534 4Fe-4S dicluster domain Sdel_1474 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Sdel_1475 PF00111 2Fe-2S iron-sulfur cluster binding domain Sdel_1475 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain Sdel_1475 PF01799 [2Fe-2S] binding domain Sdel_1475 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase Sdel_1476 PF00512 His Kinase A (phospho-acceptor) domain Sdel_1476 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Sdel_1476 PF08495 Sdel_1476 Sdel_1476 PF10442 Sdel_1476 Sdel_1477 PF00072 Response regulator receiver domain Sdel_1477 PF00486 Transcriptional regulatory protein, C terminal Sdel_1479 PF06226 Sdel_1479 Sdel_1480 PF03824 Sdel_1480 Sdel_1482 PF05787 Bacterial protein of unknown function (DUF839) Sdel_1483 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region Sdel_1484 PF01909 Nucleotidyltransferase domain Sdel_1487 PF02146 Sir2 family Sdel_1488 PF00809 Pterin binding enzyme Sdel_1488 PF02310 B12 binding domain Sdel_1488 PF02574 Homocysteine S-methyltransferase Sdel_1488 PF02607 B12 binding domain Sdel_1488 PF02965 Vitamin B12 dependent methionine synthase, activation domain Sdel_1489 PF03781 Sulfatase-modifying factor enzyme 1 Sdel_1490 PF13458 Periplasmic binding protein Sdel_1491 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Sdel_1492 PF00884 Sulfatase Sdel_1493 PF00909 Ammonium Transporter Family Sdel_1494 PF00543 Nitrogen regulatory protein P-II Sdel_1495 PF15738 Sdel_1495 Sdel_1496 PF04221 RelB antitoxin Sdel_1498 PF01850 PIN domain Sdel_1499 PF14213 Sdel_1499 Sdel_1501 PF02384 N-6 DNA Methylase Sdel_1501 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) Sdel_1501 PF12950 TaqI-like C-terminal specificity domain Sdel_1503 PF00384 Molybdopterin oxidoreductase Sdel_1504 PF02092 Sdel_1504 Sdel_1506 PF03372 Endonuclease/Exonuclease/phosphatase family Sdel_1507 PF00484 Carbonic anhydrase Sdel_1508 PF06865 Protein of unknown function (DUF1255) Sdel_1509 PF03486 HI0933-like protein Sdel_1510 PF04402 Protein of unknown function (DUF541) Sdel_1511 PF00588 SpoU rRNA Methylase family Sdel_1512 PF00551 Formyl transferase Sdel_1513 PF01743 Poly A polymerase head domain Sdel_1516 PF00180 Isocitrate/isopropylmalate dehydrogenase Sdel_1517 PF00694 Aconitase C-terminal domain Sdel_1518 PF01909 Nucleotidyltransferase domain Sdel_1519 PF01934 Protein of unknown function DUF86 Sdel_1521 PF13546 Sdel_1521 Sdel_1522 PF07885 Ion channel Sdel_1523 PF06769 Plasmid encoded toxin Txe Sdel_1524 PF04221 RelB antitoxin Sdel_1525 PF00849 RNA pseudouridylate synthase Sdel_1526 PF00005 ABC transporter Sdel_1527 PF01022 Bacterial regulatory protein, arsR family Sdel_1528 PF02040 Sdel_1528 Sdel_1529 PF00174 Oxidoreductase molybdopterin binding domain Sdel_1530 PF01794 Sdel_1530 Sdel_1531 PF06044 Dam-replacing family Sdel_1533 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) Sdel_1534 PF09962 Sdel_1534 Sdel_1535 PF00270 DEAD/DEAH box helicase Sdel_1535 PF00271 Helicase conserved C-terminal domain Sdel_1535 PF00570 HRDC domain Sdel_1535 PF09382 RQC domain Sdel_1535 PF16124 Sdel_1535 Sdel_1536 PF03061 Thioesterase superfamily Sdel_1538 PF00270 DEAD/DEAH box helicase Sdel_1538 PF00271 Helicase conserved C-terminal domain Sdel_1540 PF03831 PhnA protein Sdel_1540 PF08274 PhnA Zinc-Ribbon Sdel_1541 PF05437 Sdel_1541 Sdel_1542 PF03591 Sdel_1542 Sdel_1544 PF00460 Flagella basal body rod protein Sdel_1544 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Sdel_1545 PF00460 Flagella basal body rod protein Sdel_1545 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Sdel_1546 PF00140 Sigma-70 factor, region 1 Sdel_1546 PF04539 Sigma-70 region 3 Sdel_1546 PF04542 Sigma-70 region 2 Sdel_1546 PF04545 Sigma-70, region 4 Sdel_1548 PF05538 Sdel_1548 Sdel_1549 PF00210 Ferritin-like domain Sdel_1551 PF10670 Sdel_1551 Sdel_1553 PF02421 Ferrous iron transport protein B Sdel_1553 PF07664 Sdel_1553 Sdel_1553 PF07670 Nucleoside recognition Sdel_1554 PF04023 FeoA domain Sdel_1555 PF05940 Sdel_1555 Sdel_1556 PF00005 ABC transporter Sdel_1557 PF00528 Binding-protein-dependent transport system inner membrane component Sdel_1559 PF00593 TonB dependent receptor Sdel_1559 PF07715 TonB-dependent Receptor Plug Domain Sdel_1561 PF00593 TonB dependent receptor Sdel_1561 PF07715 TonB-dependent Receptor Plug Domain Sdel_1564 PF00593 TonB dependent receptor Sdel_1564 PF07715 TonB-dependent Receptor Plug Domain Sdel_1565 PF03929 Sdel_1565 Sdel_1566 PF03544 Gram-negative bacterial TonB protein C-terminal Sdel_1567 PF10636 Hemin uptake protein hemP Sdel_1568 PF02472 Biopolymer transport protein ExbD/TolR Sdel_1569 PF01618 Sdel_1569 Sdel_1570 PF07690 Major Facilitator Superfamily Sdel_1571 PF07690 Major Facilitator Superfamily Sdel_1572 PF00005 ABC transporter Sdel_1572 PF00664 ABC transporter transmembrane region Sdel_1573 PF00005 ABC transporter Sdel_1573 PF00664 ABC transporter transmembrane region Sdel_1574 PF00593 TonB dependent receptor Sdel_1574 PF07715 TonB-dependent Receptor Plug Domain Sdel_1575 PF12833 Helix-turn-helix domain Sdel_1576 PF00501 AMP-binding enzyme Sdel_1576 PF13193 AMP-binding enzyme C-terminal domain Sdel_1576 PF16177 Sdel_1576 Sdel_1577 PF00474 Sodium:solute symporter family Sdel_1578 PF04341 Sdel_1578 Sdel_1579 PF00072 Response regulator receiver domain Sdel_1579 PF00486 Transcriptional regulatory protein, C terminal Sdel_1580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Sdel_1581 PF04371 Porphyromonas-type peptidyl-arginine deiminase Sdel_1582 PF01545 Cation efflux family Sdel_1582 PF16916 Sdel_1582 Sdel_1583 PF02421 Ferrous iron transport protein B Sdel_1583 PF07664 Sdel_1583 Sdel_1583 PF07670 Nucleoside recognition Sdel_1584 PF04023 FeoA domain Sdel_1585 PF00795 Carbon-nitrogen hydrolase Sdel_1587 PF05973 Sdel_1587 Sdel_1589 PF01544 CorA-like Mg2+ transporter protein Sdel_1590 PF01551 Peptidase family M23 Sdel_1591 PF15436 Sdel_1591 Sdel_1592 PF01565 FAD binding domain Sdel_1592 PF02913 FAD linked oxidases, C-terminal domain Sdel_1593 PF03631 Sdel_1593 Sdel_1594 PF03772 Sdel_1594 Sdel_1595 PF00772 DnaB-like helicase N terminal domain Sdel_1595 PF03796 DnaB-like helicase C terminal domain Sdel_1596 PF04551 GcpE protein Sdel_1597 PF00270 DEAD/DEAH box helicase Sdel_1597 PF00271 Helicase conserved C-terminal domain Sdel_1599 PF07963 Prokaryotic N-terminal methylation motif Sdel_1602 PF00271 Helicase conserved C-terminal domain Sdel_1602 PF02151 UvrB/uvrC motif Sdel_1602 PF04851 Type III restriction enzyme, res subunit Sdel_1602 PF12344 Ultra-violet resistance protein B Sdel_1603 PF02503 Polyphosphate kinase middle domain Sdel_1603 PF13089 Polyphosphate kinase N-terminal domain Sdel_1603 PF13090 Polyphosphate kinase C-terminal domain Sdel_1604 PF00132 Bacterial transferase hexapeptide (six repeats) Sdel_1605 PF00929 Exonuclease Sdel_1606 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase Sdel_1607 PF00834 Ribulose-phosphate 3 epimerase family Sdel_1608 PF00830 Ribosomal L28 family Sdel_1609 PF01960 ArgJ family Sdel_1610 PF04325 Protein of unknown function (DUF465) Sdel_1611 PF00730 HhH-GPD superfamily base excision DNA repair protein Sdel_1612 PF13277 YmdB-like protein Sdel_1613 PF00270 DEAD/DEAH box helicase Sdel_1613 PF00271 Helicase conserved C-terminal domain Sdel_1613 PF02559 CarD-like/TRCF domain Sdel_1613 PF03461 TRCF domain Sdel_1614 PF04519 Sdel_1614 Sdel_1615 PF01551 Peptidase family M23 Sdel_1616 PF08245 Mur ligase middle domain Sdel_1617 PF00990 GGDEF domain Sdel_1618 PF04390 Lipopolysaccharide-assembly Sdel_1619 PF00133 tRNA synthetases class I (I, L, M and V) Sdel_1619 PF09334 tRNA synthetases class I (M) Sdel_1619 PF13603 Leucyl-tRNA synthetase, Domain 2 Sdel_1620 PF02355 Protein export membrane protein Sdel_1620 PF07549 SecD/SecF GG Motif Sdel_1621 PF02355 Protein export membrane protein Sdel_1622 PF02699 Preprotein translocase subunit Sdel_1624 PF00438 S-adenosylmethionine synthetase, N-terminal domain Sdel_1624 PF02772 S-adenosylmethionine synthetase, central domain Sdel_1624 PF02773 S-adenosylmethionine synthetase, C-terminal domain Sdel_1625 PF03588 Leucyl/phenylalanyl-tRNA protein transferase Sdel_1626 PF00004 ATPase family associated with various cellular activities (AAA) Sdel_1626 PF02861 Clp amino terminal domain Sdel_1626 PF07724 AAA domain (Cdc48 subfamily) Sdel_1626 PF10431 C-terminal, D2-small domain, of ClpB protein Sdel_1627 PF02617 ATP-dependent Clp protease adaptor protein ClpS Sdel_1629 PF01668 SmpB protein Sdel_1630 PF00288 GHMP kinases N terminal domain Sdel_1631 PF02599 Global regulator protein family Sdel_1632 PF01509 TruB family pseudouridylate synthase (N terminal domain) Sdel_1633 PF00580 UvrD/REP helicase N-terminal domain Sdel_1633 PF13361 UvrD-like helicase C-terminal domain Sdel_1634 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Sdel_1634 PF03466 LysR substrate binding domain Sdel_1636 PF01432 Peptidase family M3 Sdel_1636 PF08439 Oligopeptidase F Sdel_1637 PF01063 Aminotransferase class IV Sdel_1638 PF00425 chorismate binding enzyme Sdel_1639 PF05433 Sdel_1639 Sdel_1640 PF13500 AAA domain Sdel_1641 PF06445 GyrI-like small molecule binding domain Sdel_1641 PF12833 Helix-turn-helix domain Sdel_1642 PF00155 Aminotransferase class I and II Sdel_1643 PF09835 Sdel_1643 Sdel_1644 PF01937 Protein of unknown function DUF89 Sdel_1645 PF01245 Ribosomal protein L19 Sdel_1646 PF01746 tRNA (Guanine-1)-methyltransferase Sdel_1647 PF01782 RimM N-terminal domain Sdel_1648 PF13083 KH domain Sdel_1649 PF00886 Ribosomal protein S16 Sdel_1650 PF00448 SRP54-type protein, GTPase domain Sdel_1650 PF02881 SRP54-type protein, helical bundle domain Sdel_1650 PF02978 Signal peptide binding domain Sdel_1651 PF00849 RNA pseudouridylate synthase Sdel_1652 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) Sdel_1653 PF02591 Putative zinc ribbon domain Sdel_1654 PF01784 NIF3 (NGG1p interacting factor 3) Sdel_1655 PF02091 Glycyl-tRNA synthetase alpha subunit Sdel_1656 PF13118 Sdel_1656 Sdel_1657 PF00731 AIR carboxylase Sdel_1658 PF01136 Sdel_1658 Sdel_1660 PF02811 PHP domain Sdel_1660 PF13263 PHP-associated Sdel_1661 PF00120 Glutamine synthetase, catalytic domain Sdel_1661 PF03951 Glutamine synthetase, beta-Grasp domain Sdel_1662 PF00905 Penicillin binding protein transpeptidase domain Sdel_1662 PF00912 Transglycosylase Sdel_1663 PF00005 ABC transporter Sdel_1664 PF00155 Aminotransferase class I and II Sdel_1665 PF02545 Maf-like protein Sdel_1667 PF01411 tRNA synthetases class II (A) Sdel_1667 PF02272 DHHA1 domain Sdel_1667 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain Sdel_1670 PF00762 Ferrochelatase Sdel_1671 PF00905 Penicillin binding protein transpeptidase domain Sdel_1671 PF03717 Penicillin-binding Protein dimerisation domain Sdel_1672 PF02049 Sdel_1672 Sdel_1673 PF00460 Flagella basal body rod protein Sdel_1673 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Sdel_1674 PF00460 Flagella basal body rod protein Sdel_1675 PF01098 Sdel_1675 Sdel_1676 PF03033 Glycosyltransferase family 28 N-terminal domain Sdel_1676 PF04101 Glycosyltransferase family 28 C-terminal domain Sdel_1677 PF00583 Acetyltransferase (GNAT) family Sdel_1678 PF12836 Helix-hairpin-helix motif Sdel_1680 PF13231 Sdel_1680 Sdel_1681 PF00117 Glutamine amidotransferase class-I Sdel_1682 PF00512 His Kinase A (phospho-acceptor) domain Sdel_1682 PF01627 Hpt domain Sdel_1682 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Sdel_1683 PF07690 Major Facilitator Superfamily Sdel_1684 PF00156 Phosphoribosyl transferase domain Sdel_1685 PF00860 Permease family Sdel_1686 PF04055 Radical SAM superfamily Sdel_1687 PF00291 Pyridoxal-phosphate dependent enzyme Sdel_1688 PF01966 HD domain Sdel_1688 PF08335 GlnD PII-uridylyltransferase Sdel_1689 PF01380 SIS domain Sdel_1689 PF13522 Glutamine amidotransferase domain Sdel_1690 PF13186 Iron-sulfur cluster-binding domain Sdel_1691 PF01230 HIT domain Sdel_1692 PF17033 Sdel_1692 Sdel_1692 PF17129 Sdel_1692 Sdel_1693 PF00563 EAL domain Sdel_1693 PF08668 HDOD domain Sdel_1694 PF03547 Sdel_1694 Sdel_1695 PF01253 Translation initiation factor SUI1 Sdel_1696 PF00005 ABC transporter Sdel_1696 PF12848 ABC transporter Sdel_1697 PF00563 EAL domain Sdel_1697 PF00990 GGDEF domain Sdel_1698 PF13641 Glycosyltransferase like family 2 Sdel_1699 PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 Sdel_1699 PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain Sdel_1700 PF02597 ThiS family Sdel_1701 PF02597 ThiS family Sdel_1702 PF00899 ThiF family Sdel_1703 PF00990 GGDEF domain Sdel_1705 PF14602 Hexapeptide repeat of succinyl-transferase Sdel_1705 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle Sdel_1705 PF14790 Tetrahydrodipicolinate N-succinyltransferase N-terminal Sdel_1706 PF01883 Domain of unknown function DUF59 Sdel_1706 PF10609 ParA/MinD ATPase like Sdel_1707 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase Sdel_1707 PF02542 YgbB family Sdel_1708 PF00072 Response regulator receiver domain Sdel_1709 PF01747 ATP-sulfurylase Sdel_1709 PF14306 PUA-like domain Sdel_1710 PF04608 Phosphatidylglycerophosphatase A Sdel_1711 PF04264 YceI-like domain Sdel_1712 PF01205 Uncharacterized protein family UPF0029 Sdel_1713 PF00005 ABC transporter Sdel_1714 PF00528 Binding-protein-dependent transport system inner membrane component Sdel_1715 PF13379 NMT1-like family Sdel_1716 PF00005 ABC transporter Sdel_1717 PF00528 Binding-protein-dependent transport system inner membrane component Sdel_1718 PF03459 TOBE domain Sdel_1719 PF13531 Bacterial extracellular solute-binding protein Sdel_1720 PF00768 D-alanyl-D-alanine carboxypeptidase Sdel_1721 PF09521 Sdel_1721 Sdel_1722 PF00145 C-5 cytosine-specific DNA methylase Sdel_1723 PF03807 NADP oxidoreductase coenzyme F420-dependent Sdel_1723 PF14748 Pyrroline-5-carboxylate reductase dimerisation Sdel_1724 PF02687 Sdel_1724 Sdel_1724 PF12704 MacB-like periplasmic core domain Sdel_1725 PF00005 ABC transporter Sdel_1726 PF16576 Sdel_1726 Sdel_1727 PF02321 Outer membrane efflux protein Sdel_1728 PF02582 Sdel_1728 Sdel_1729 PF11391 Sdel_1729 Sdel_1730 PF00924 Mechanosensitive ion channel Sdel_1730 PF05552 Conserved TM helix Sdel_1731 PF00072 Response regulator receiver domain Sdel_1733 PF14899 Sdel_1733 Sdel_1734 PF01654 Sdel_1734 Sdel_1735 PF02322 Sdel_1735 Sdel_1737 PF00990 GGDEF domain Sdel_1737 PF11845 Sdel_1737 Sdel_1738 PF00034 Cytochrome c Sdel_1739 PF00122 E1-E2 ATPase Sdel_1739 PF00689 Cation transporting ATPase, C-terminus Sdel_1739 PF00690 Cation transporter/ATPase, N-terminus Sdel_1739 PF00702 haloacid dehalogenase-like hydrolase Sdel_1740 PF08238 Sel1 repeat Sdel_1741 PF08212 Lipocalin-like domain Sdel_1743 PF09982 Uncharacterized protein conserved in bacteria (DUF2219) Sdel_1745 PF05170 Sdel_1745 Sdel_1745 PF13502 Sdel_1745 Sdel_1746 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family Sdel_1747 PF01029 NusB family Sdel_1748 PF00885 6,7-dimethyl-8-ribityllumazine synthase Sdel_1749 PF03781 Sulfatase-modifying factor enzyme 1 Sdel_1749 PF12867 DinB superfamily Sdel_1749 PF13847 Methyltransferase domain Sdel_1750 PF00793 DAHP synthetase I family Sdel_1751 PF00892 EamA-like transporter family Sdel_1752 PF00924 Mechanosensitive ion channel Sdel_1753 PF01926 50S ribosome-binding GTPase Sdel_1753 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal Sdel_1754 PF01202 Shikimate kinase Sdel_1755 PF00579 tRNA synthetases class I (W and Y) Sdel_1756 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) Sdel_1756 PF02403 Seryl-tRNA synthetase N-terminal domain Sdel_1757 PF13181 Tetratricopeptide repeat Sdel_1757 PF13432 Tetratricopeptide repeat Sdel_1758 PF00682 HMGL-like Sdel_1758 PF08502 LeuA allosteric (dimerisation) domain Sdel_1759 PF01066 CDP-alcohol phosphatidyltransferase Sdel_1760 PF02666 Sdel_1760 Sdel_1761 PF00004 ATPase family associated with various cellular activities (AAA) Sdel_1761 PF01434 Peptidase family M41 Sdel_1762 PF06325 Ribosomal protein L11 methyltransferase (PrmA) Sdel_1763 PF00072 Response regulator receiver domain Sdel_1764 PF00977 Histidine biosynthesis protein Sdel_1765 PF00117 Glutamine amidotransferase class-I Sdel_1767 PF02516 Oligosaccharyl transferase STT3 subunit Sdel_1768 PF02706 Chain length determinant protein Sdel_1768 PF13807 Sdel_1768 Sdel_1769 PF02719 Polysaccharide biosynthesis protein Sdel_1770 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase Sdel_1771 PF00953 Glycosyl transferase family 4 Sdel_1772 PF01370 NAD dependent epimerase/dehydratase family Sdel_1773 PF00535 Glycosyl transferase family 2 Sdel_1774 PF01531 Sdel_1774 Sdel_1775 PF03414 Glycosyltransferase family 6 Sdel_1778 PF00535 Glycosyl transferase family 2 Sdel_1779 PF01531 Sdel_1779 Sdel_1780 PF14602 Hexapeptide repeat of succinyl-transferase Sdel_1781 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family Sdel_1782 PF13302 Acetyltransferase (GNAT) domain Sdel_1783 PF00132 Bacterial transferase hexapeptide (six repeats) Sdel_1784 PF05523 WxcM-like, C-terminal Sdel_1785 PF16363 Sdel_1785 Sdel_1786 PF00483 Nucleotidyl transferase Sdel_1787 PF01531 Sdel_1787 Sdel_1788 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family Sdel_1789 PF01370 NAD dependent epimerase/dehydratase family Sdel_1790 PF16363 Sdel_1790 Sdel_1791 PF00483 Nucleotidyl transferase Sdel_1791 PF01050 Mannose-6-phosphate isomerase Sdel_1792 PF01370 NAD dependent epimerase/dehydratase family Sdel_1793 PF16363 Sdel_1793 Sdel_1794 PF13412 Winged helix-turn-helix DNA-binding Sdel_1795 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain Sdel_1795 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain Sdel_1795 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain Sdel_1796 PF01068 ATP dependent DNA ligase domain Sdel_1796 PF14743 DNA ligase OB-like domain Sdel_1797 PF16363 Sdel_1797 Sdel_1798 PF00483 Nucleotidyl transferase Sdel_1799 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain Sdel_1799 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I Sdel_1799 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II Sdel_1799 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III Sdel_1800 PF10108 Predicted 3'-5' exonuclease related to the exonuclease domain of PolB Sdel_1801 PF06293 Lipopolysaccharide kinase (Kdo/WaaP) family Sdel_1802 PF01522 Polysaccharide deacetylase Sdel_1803 PF00535 Glycosyl transferase family 2 Sdel_1805 PF01075 Glycosyltransferase family 9 (heptosyltransferase) Sdel_1806 PF00534 Glycosyl transferases group 1 Sdel_1806 PF13439 Glycosyltransferase Family 4 Sdel_1807 PF06293 Lipopolysaccharide kinase (Kdo/WaaP) family Sdel_1808 PF01075 Glycosyltransferase family 9 (heptosyltransferase) Sdel_1810 PF03279 Sdel_1810 Sdel_1811 PF04932 Sdel_1811 Sdel_1812 PF13580 SIS domain Sdel_1813 PF00294 pfkB family carbohydrate kinase Sdel_1813 PF01467 Cytidylyltransferase Sdel_1814 PF01370 NAD dependent epimerase/dehydratase family Sdel_1815 PF08645 Polynucleotide kinase 3 phosphatase Sdel_1817 PF13442 Cytochrome C oxidase, cbb3-type, subunit III Sdel_1818 PF03597 Sdel_1818 Sdel_1819 PF00122 E1-E2 ATPase Sdel_1819 PF00403 Heavy-metal-associated domain Sdel_1819 PF00702 haloacid dehalogenase-like hydrolase Sdel_1819 PF12156 Sdel_1819 Sdel_1820 PF00563 EAL domain Sdel_1820 PF00990 GGDEF domain Sdel_1821 PF00990 GGDEF domain Sdel_1821 PF09084 NMT1/THI5 like Sdel_1821 PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein Sdel_1822 PF08534 Redoxin Sdel_1824 PF02578 Multi-copper polyphenol oxidoreductase laccase Sdel_1825 PF00677 Lumazine binding domain Sdel_1826 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Sdel_1826 PF00672 HAMP domain Sdel_1826 PF14827 Sensory domain of two-component sensor kinase Sdel_1827 PF02626 Allophanate hydrolase subunit 2 Sdel_1828 PF02682 Allophanate hydrolase subunit 1 Sdel_1829 PF03746 LamB/YcsF family Sdel_1830 PF01134 Glucose inhibited division protein A Sdel_1830 PF13932 GidA associated domain 3 Sdel_1831 PF00355 Rieske [2Fe-2S] domain Sdel_1832 PF00032 Cytochrome b(C-terminal)/b6/petD Sdel_1832 PF00033 Cytochrome b(N-terminal)/b6/petB Sdel_1833 PF00034 Cytochrome c Sdel_1834 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit Sdel_1835 PF00109 Beta-ketoacyl synthase, N-terminal domain Sdel_1835 PF02801 Beta-ketoacyl synthase, C-terminal domain Sdel_1836 PF00550 Phosphopantetheine attachment site Sdel_1837 PF13561 Enoyl-(Acyl carrier protein) reductase Sdel_1838 PF01676 Metalloenzyme superfamily Sdel_1838 PF06415 BPG-independent PGAM N-terminus (iPGM_N) Sdel_1839 PF00953 Glycosyl transferase family 4 Sdel_1840 PF08245 Mur ligase middle domain Sdel_1841 PF00004 ATPase family associated with various cellular activities (AAA) Sdel_1841 PF01434 Peptidase family M41 Sdel_1842 PF00563 EAL domain Sdel_1842 PF00571 CBS domain Sdel_1842 PF00990 GGDEF domain Sdel_1844 PF00497 Bacterial extracellular solute-binding proteins, family 3 Sdel_1845 PF00497 Bacterial extracellular solute-binding proteins, family 3 Sdel_1846 PF03649 Sdel_1846 Sdel_1847 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain Sdel_1847 PF02785 Biotin carboxylase C-terminal domain Sdel_1847 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain Sdel_1850 PF01384 Sdel_1850 Sdel_1851 PF00270 DEAD/DEAH box helicase Sdel_1851 PF00271 Helicase conserved C-terminal domain Sdel_1852 PF02639 Sdel_1852 Sdel_1853 PF03692 Sdel_1853 Sdel_1854 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Sdel_1856 PF00005 ABC transporter Sdel_1857 PF00528 Binding-protein-dependent transport system inner membrane component Sdel_1857 PF11812 Sdel_1857 Sdel_1858 PF00528 Binding-protein-dependent transport system inner membrane component Sdel_1858 PF12501 Sdel_1858 Sdel_1859 PF12849 PBP superfamily domain Sdel_1860 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Sdel_1861 PF12838 4Fe-4S dicluster domain Sdel_1862 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains Sdel_1863 PF00146 NADH dehydrogenase Sdel_1864 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L Sdel_1865 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains Sdel_1865 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus Sdel_1866 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit Sdel_1866 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit Sdel_1866 PF00374 Nickel-dependent hydrogenase Sdel_1867 PF12838 4Fe-4S dicluster domain Sdel_1868 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit Sdel_1869 PF07450 Sdel_1869 Sdel_1870 PF01750 Hydrogenase maturation protease Sdel_1871 PF01553 Acyltransferase Sdel_1871 PF13444 Acetyltransferase (GNAT) domain Sdel_1872 PF01895 PhoU domain Sdel_1873 PF00072 Response regulator receiver domain Sdel_1873 PF00486 Transcriptional regulatory protein, C terminal Sdel_1874 PF00512 His Kinase A (phospho-acceptor) domain Sdel_1874 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Sdel_1875 PF03061 Thioesterase superfamily Sdel_1876 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Sdel_1876 PF05228 Sdel_1876 Sdel_1877 PF06508 Queuosine biosynthesis protein QueC Sdel_1878 PF04055 Radical SAM superfamily Sdel_1878 PF13353 4Fe-4S single cluster domain Sdel_1879 PF01242 6-pyruvoyl tetrahydropterin synthase Sdel_1880 PF08761 dUTPase Sdel_1881 PF01734 Patatin-like phospholipase Sdel_1882 PF12850 Calcineurin-like phosphoesterase superfamily domain Sdel_1883 PF02562 PhoH-like protein Sdel_1883 PF13638 PIN domain Sdel_1884 PF02321 Outer membrane efflux protein Sdel_1885 PF00873 AcrB/AcrD/AcrF family Sdel_1886 PF00529 HlyD family secretion protein Sdel_1886 PF16576 Sdel_1886 Sdel_1887 PF01814 Hemerythrin HHE cation binding domain Sdel_1889 PF00375 Sodium:dicarboxylate symporter family Sdel_1890 PF02664 S-Ribosylhomocysteinase (LuxS) Sdel_1891 PF02690 Sdel_1891 Sdel_1894 PF02635 DsrE/DsrF-like family Sdel_1895 PF00226 DnaJ domain Sdel_1897 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain Sdel_1897 PF02777 Iron/manganese superoxide dismutases, C-terminal domain Sdel_1898 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase Sdel_1898 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg Sdel_1898 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Sdel_1898 PF10371 Domain of unknown function Sdel_1898 PF13484 Sdel_1898 Sdel_1898 PF17147 Sdel_1898 Sdel_1899 PF13419 Haloacid dehalogenase-like hydrolase Sdel_1900 PF13852 Sdel_1900 Sdel_1901 PF00691 OmpA family Sdel_1901 PF13505 Outer membrane protein beta-barrel domain Sdel_1902 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Sdel_1903 PF04237 YjbR Sdel_1904 PF04463 Sdel_1904 Sdel_1905 PF02222 ATP-grasp domain Sdel_1907 PF11523 Protein of unknown function (DUF3223) Sdel_1908 PF00380 Ribosomal protein S9/S16 Sdel_1909 PF00572 Ribosomal protein L13 Sdel_1910 PF00580 UvrD/REP helicase N-terminal domain Sdel_1910 PF12705 PD-(D/E)XK nuclease superfamily Sdel_1910 PF13361 UvrD-like helicase C-terminal domain Sdel_1911 PF12705 PD-(D/E)XK nuclease superfamily Sdel_1912 PF05751 Sdel_1912 Sdel_1915 PF13179 Sdel_1915 Sdel_1916 PF13442 Cytochrome C oxidase, cbb3-type, subunit III Sdel_1916 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP Sdel_1917 PF05545 Sdel_1917 Sdel_1918 PF02433 Cytochrome C oxidase, mono-heme subunit/FixO Sdel_1919 PF00115 Cytochrome C and Quinol oxidase polypeptide I Sdel_1920 PF00072 Response regulator receiver domain Sdel_1920 PF00486 Transcriptional regulatory protein, C terminal Sdel_1921 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Sdel_1921 PF08447 PAS fold Sdel_1922 PF13386 Sdel_1922 Sdel_1923 PF00117 Glutamine amidotransferase class-I Sdel_1923 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain Sdel_1924 PF04368 Sdel_1924 Sdel_1925 PF03448 MgtE intracellular N domain Sdel_1926 PF02050 Flagellar FliJ protein Sdel_1927 PF00709 Adenylosuccinate synthetase Sdel_1928 PF13393 Histidyl-tRNA synthetase Sdel_1929 PF00266 Aminotransferase class-V Sdel_1930 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Sdel_1930 PF02743 Cache domain Sdel_1931 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Sdel_1931 PF02743 Cache domain Sdel_1932 PF13419 Haloacid dehalogenase-like hydrolase Sdel_1933 PF00456 Transketolase, thiamine diphosphate binding domain Sdel_1933 PF02779 Transketolase, pyrimidine binding domain Sdel_1933 PF02780 Transketolase, C-terminal domain Sdel_1934 PF00348 Polyprenyl synthetase Sdel_1936 PF02575 YbaB/EbfC DNA-binding family Sdel_1937 PF02261 Aspartate decarboxylase Sdel_1938 PF02875 Mur ligase family, glutamate ligase domain Sdel_1938 PF08245 Mur ligase middle domain Sdel_1940 PF01106 NifU-like domain Sdel_1941 PF01196 Ribosomal protein L17 Sdel_1942 PF01000 RNA polymerase Rpb3/RpoA insert domain Sdel_1942 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain Sdel_1942 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain Sdel_1943 PF00163 Ribosomal protein S4/S9 N-terminal domain Sdel_1943 PF01479 S4 domain Sdel_1944 PF00411 Ribosomal protein S11 Sdel_1945 PF00416 Ribosomal protein S13/S18 Sdel_1946 PF00444 Ribosomal protein L36 Sdel_1947 PF01176 Translation initiation factor 1A / IF-1 Sdel_1948 PF00557 Metallopeptidase family M24 Sdel_1949 PF00344 SecY translocase Sdel_1950 PF00828 Ribosomal protein L18e/L15 Sdel_1951 PF00333 Ribosomal protein S5, N-terminal domain Sdel_1951 PF03719 Ribosomal protein S5, C-terminal domain Sdel_1952 PF00861 Ribosomal L18p/L5e family Sdel_1953 PF00347 Ribosomal protein L6 Sdel_1954 PF00410 Ribosomal protein S8 Sdel_1955 PF00253 Ribosomal protein S14p/S29e Sdel_1956 PF00281 Ribosomal protein L5 Sdel_1956 PF00673 ribosomal L5P family C-terminus Sdel_1957 PF00467 KOW motif Sdel_1957 PF17136 Sdel_1957 Sdel_1958 PF00238 Ribosomal protein L14p/L23e Sdel_1959 PF00366 Ribosomal protein S17 Sdel_1960 PF00831 Ribosomal L29 protein Sdel_1961 PF00252 Ribosomal protein L16p/L10e Sdel_1962 PF00189 Ribosomal protein S3, C-terminal domain Sdel_1962 PF07650 KH domain Sdel_1963 PF00237 Ribosomal protein L22p/L17e Sdel_1964 PF00203 Ribosomal protein S19 Sdel_1965 PF00181 Ribosomal Proteins L2, RNA binding domain Sdel_1965 PF03947 Ribosomal Proteins L2, C-terminal domain Sdel_1966 PF00276 Ribosomal protein L23 Sdel_1967 PF00573 Ribosomal protein L4/L1 family Sdel_1968 PF00297 Ribosomal protein L3 Sdel_1969 PF00338 Ribosomal protein S10p/S20e Sdel_1971 PF01351 Ribonuclease HII Sdel_1972 PF04023 FeoA domain Sdel_1973 PF02421 Ferrous iron transport protein B Sdel_1973 PF07664 Sdel_1973 Sdel_1973 PF07670 Nucleoside recognition Sdel_1974 PF01264 Chorismate synthase Sdel_1975 PF00035 Double-stranded RNA binding motif Sdel_1975 PF14622 Ribonuclease-III-like Sdel_1976 PF00075 RNase H Sdel_1977 PF13176 Tetratricopeptide repeat Sdel_1978 PF01807 CHC2 zinc finger Sdel_1978 PF08275 DNA primase catalytic core, N-terminal domain Sdel_1978 PF10410 DnaB-helicase binding domain of primase Sdel_1978 PF13662 Toprim domain Sdel_1978 PF16730 Sdel_1978 Sdel_1979 PF03054 tRNA methyl transferase Sdel_1980 PF00072 Response regulator receiver domain Sdel_1982 PF00989 PAS fold Sdel_1982 PF00990 GGDEF domain Sdel_1983 PF00072 Response regulator receiver domain Sdel_1984 PF00512 His Kinase A (phospho-acceptor) domain Sdel_1984 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Sdel_1984 PF13426 PAS domain Sdel_1985 PF00072 Response regulator receiver domain Sdel_1985 PF01339 CheB methylesterase Sdel_1986 PF03975 CheD chemotactic sensory transduction Sdel_1987 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Sdel_1988 PF01739 CheR methyltransferase, SAM binding domain Sdel_1988 PF03705 CheR methyltransferase, all-alpha domain Sdel_1989 PF01584 CheW-like domain Sdel_1989 PF01627 Hpt domain Sdel_1989 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Sdel_1989 PF02895 Signal transducing histidine kinase, homodimeric domain Sdel_1991 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Sdel_1991 PF12729 Sdel_1991 Sdel_1992 PF01584 CheW-like domain Sdel_1993 PF00072 Response regulator receiver domain Sdel_1994 PF00226 DnaJ domain Sdel_1995 PF00589 Phage integrase family Sdel_1996 PF12728 Helix-turn-helix domain Sdel_1998 PF01695 IstB-like ATP binding protein Sdel_1999 PF00665 Integrase core domain Sdel_2000 PF13546 Sdel_2000 Sdel_2002 PF02661 Fic/DOC family Sdel_2002 PF13776 Sdel_2002 Sdel_2003 PF01464 Transglycosylase SLT domain Sdel_2004 PF00072 Response regulator receiver domain Sdel_2004 PF00486 Transcriptional regulatory protein, C terminal Sdel_2005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Sdel_2005 PF04392 ABC transporter substrate binding protein Sdel_2006 PF00710 Asparaginase Sdel_2007 PF03605 Sdel_2007 Sdel_2008 PF00206 Lyase Sdel_2008 PF10415 Fumarase C C-terminus Sdel_2009 PF00206 Lyase Sdel_2009 PF10415 Fumarase C C-terminus Sdel_2010 PF00106 short chain dehydrogenase Sdel_2012 PF00145 C-5 cytosine-specific DNA methylase Sdel_2019 PF00005 ABC transporter Sdel_2020 PF02687 Sdel_2020 Sdel_2020 PF12704 MacB-like periplasmic core domain Sdel_2021 PF17131 Sdel_2021 Sdel_2023 PF01869 BadF/BadG/BcrA/BcrD ATPase family Sdel_2024 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component Sdel_2026 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Sdel_2026 PF13682 Chemoreceptor zinc-binding domain Sdel_2027 PF00072 Response regulator receiver domain Sdel_2028 PF00512 His Kinase A (phospho-acceptor) domain Sdel_2028 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Sdel_2028 PF08448 PAS fold Sdel_2028 PF13426 PAS domain Sdel_2029 PF02673 Sdel_2029 Sdel_2030 PF02001 Sdel_2030 Sdel_2030 PF02579 Dinitrogenase iron-molybdenum cofactor Sdel_2031 PF02579 Dinitrogenase iron-molybdenum cofactor Sdel_2032 PF00563 EAL domain Sdel_2033 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Sdel_2034 PF00528 Binding-protein-dependent transport system inner membrane component Sdel_2035 PF00528 Binding-protein-dependent transport system inner membrane component Sdel_2035 PF12911 Sdel_2035 Sdel_2036 PF00583 Acetyltransferase (GNAT) family Sdel_2037 PF00884 Sulfatase Sdel_2037 PF08019 Sdel_2037 Sdel_2038 PF00512 His Kinase A (phospho-acceptor) domain Sdel_2038 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Sdel_2039 PF00072 Response regulator receiver domain Sdel_2039 PF00486 Transcriptional regulatory protein, C terminal Sdel_2040 PF03960 ArsC family Sdel_2041 PF01810 Sdel_2041 Sdel_2042 PF01370 NAD dependent epimerase/dehydratase family Sdel_2042 PF08338 Domain of unknown function (DUF1731) Sdel_2043 PF01810 Sdel_2043 Sdel_2045 PF00258 Flavodoxin Sdel_2046 PF06226 Sdel_2046 Sdel_2047 PF03824 Sdel_2047 Sdel_2048 PF06226 Sdel_2048 Sdel_2050 PF10087 Sdel_2050 Sdel_2051 PF00563 EAL domain Sdel_2052 PF03595 Voltage-dependent anion channel Sdel_2053 PF00586 AIR synthase related protein, N-terminal domain Sdel_2053 PF02769 AIR synthase related protein, C-terminal domain Sdel_2054 PF01206 Sulfurtransferase TusA Sdel_2056 PF00528 Binding-protein-dependent transport system inner membrane component Sdel_2057 PF00005 ABC transporter Sdel_2058 PF13531 Bacterial extracellular solute-binding protein Sdel_2059 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Sdel_2060 PF02634 FdhD/NarQ family Sdel_2061 PF00593 TonB dependent receptor Sdel_2063 PF00005 ABC transporter Sdel_2064 PF01032 FecCD transport family Sdel_2065 PF03544 Gram-negative bacterial TonB protein C-terminal Sdel_2066 PF02472 Biopolymer transport protein ExbD/TolR Sdel_2067 PF01618 Sdel_2067 Sdel_2068 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Sdel_2068 PF03459 TOBE domain Sdel_2069 PF01497 Periplasmic binding protein Sdel_2070 PF04055 Radical SAM superfamily Sdel_2072 PF01292 Prokaryotic cytochrome b561 Sdel_2073 PF13247 4Fe-4S dicluster domain Sdel_2074 PF00384 Molybdopterin oxidoreductase Sdel_2074 PF01568 Molydopterin dinucleotide binding domain Sdel_2075 PF00384 Molybdopterin oxidoreductase Sdel_2075 PF04879 Molybdopterin oxidoreductase Fe4S4 domain Sdel_2077 PF02613 Nitrate reductase delta subunit Sdel_2078 PF12838 4Fe-4S dicluster domain Sdel_2078 PF13237 4Fe-4S dicluster domain Sdel_2079 PF13458 Periplasmic binding protein Sdel_2080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Sdel_2081 PF00072 Response regulator receiver domain Sdel_2081 PF05732 Sdel_2081 Sdel_2082 PF03841 L-seryl-tRNA selenium transferase Sdel_2083 PF00009 Elongation factor Tu GTP binding domain Sdel_2083 PF09107 Elongation factor SelB, winged helix Sdel_2084 PF00890 FAD binding domain Sdel_2085 PF14537 Cytochrome c3 Sdel_2086 PF03264 NapC/NirT cytochrome c family, N-terminal region Sdel_2087 PF03573 outer membrane porin, OprD family Sdel_2088 PF00486 Transcriptional regulatory protein, C terminal Sdel_2089 PF00890 FAD binding domain Sdel_2090 PF00486 Transcriptional regulatory protein, C terminal Sdel_2092 PF13098 Thioredoxin-like domain Sdel_2093 PF08447 PAS fold Sdel_2093 PF13426 PAS domain Sdel_2094 PF00072 Response regulator receiver domain Sdel_2094 PF00486 Transcriptional regulatory protein, C terminal Sdel_2096 PF00891 O-methyltransferase Sdel_2098 PF00535 Glycosyl transferase family 2 Sdel_2099 PF03279 Sdel_2099 Sdel_2100 PF00221 Aromatic amino acid lyase Sdel_2101 PF13561 Enoyl-(Acyl carrier protein) reductase Sdel_2105 PF00501 AMP-binding enzyme Sdel_2107 PF00005 ABC transporter Sdel_2108 PF12698 ABC-2 family transporter protein Sdel_2109 PF00550 Phosphopantetheine attachment site Sdel_2110 PF00109 Beta-ketoacyl synthase, N-terminal domain Sdel_2110 PF02801 Beta-ketoacyl synthase, C-terminal domain Sdel_2114 PF03008 Sdel_2114 Sdel_2115 PF00037 4Fe-4S binding domain Sdel_2116 PF14399 Sdel_2116 Sdel_2116 PF16169 Sdel_2116 Sdel_2118 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal Sdel_2120 PF00561 alpha/beta hydrolase fold Sdel_2122 PF13723 Sdel_2122 Sdel_2123 PF00109 Beta-ketoacyl synthase, N-terminal domain Sdel_2123 PF02801 Beta-ketoacyl synthase, C-terminal domain Sdel_2124 PF00550 Phosphopantetheine attachment site Sdel_2125 PF00270 DEAD/DEAH box helicase Sdel_2125 PF00271 Helicase conserved C-terminal domain Sdel_2126 PF00403 Heavy-metal-associated domain Sdel_2128 PF01841 Transglutaminase-like superfamily Sdel_2129 PF02086 D12 class N6 adenine-specific DNA methyltransferase Sdel_2130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Sdel_2131 PF00072 Response regulator receiver domain Sdel_2131 PF00486 Transcriptional regulatory protein, C terminal Sdel_2132 PF13202 EF hand Sdel_2132 PF13833 EF-hand domain pair Sdel_2135 PF02492 CobW/HypB/UreG, nucleotide-binding domain Sdel_2135 PF07683 Cobalamin synthesis protein cobW C-terminal domain Sdel_2136 PF00753 Metallo-beta-lactamase superfamily Sdel_2138 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Sdel_2138 PF08447 PAS fold Sdel_2138 PF13426 PAS domain Sdel_2139 PF00072 Response regulator receiver domain Sdel_2139 PF00486 Transcriptional regulatory protein, C terminal Sdel_2140 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain Sdel_2141 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Sdel_2141 PF08269 Cache domain Sdel_2142 PF03435 Saccharopine dehydrogenase Sdel_2142 PF16653 Sdel_2142 Sdel_2143 PF01725 Ham1 family Sdel_2144 PF03562 MltA specific insert domain Sdel_2144 PF06725 3D domain Sdel_2146 PF07690 Major Facilitator Superfamily Sdel_2147 PF09335 Sdel_2147 Sdel_2150 PF00994 Probable molybdopterin binding domain Sdel_2150 PF03453 MoeA N-terminal region (domain I and II) Sdel_2151 PF02391 MoaE protein Sdel_2152 PF02597 ThiS family Sdel_2153 PF01106 NifU-like domain Sdel_2153 PF01592 NifU-like N terminal domain Sdel_2153 PF04324 BFD-like [2Fe-2S] binding domain Sdel_2154 PF00266 Aminotransferase class-V Sdel_2155 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Sdel_2156 PF01227 GTP cyclohydrolase I Sdel_2157 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase Sdel_2157 PF05697 Bacterial trigger factor protein (TF) Sdel_2157 PF05698 Bacterial trigger factor protein (TF) C-terminus Sdel_2158 PF00574 Clp protease Sdel_2159 PF00990 GGDEF domain Sdel_2160 PF01327 Polypeptide deformylase Sdel_2161 PF01078 Magnesium chelatase, subunit ChlI Sdel_2161 PF13335 Sdel_2161 Sdel_2161 PF13541 Subunit ChlI of Mg-chelatase Sdel_2162 PF01256 Carbohydrate kinase Sdel_2162 PF03853 YjeF-related protein N-terminus Sdel_2163 PF00551 Formyl transferase Sdel_2164 PF05690 Thiazole biosynthesis protein ThiG Sdel_2166 PF13173 AAA domain Sdel_2167 PF02080 TrkA-C domain Sdel_2167 PF02254 TrkA-N domain Sdel_2168 PF00520 Ion transport protein Sdel_2168 PF02254 TrkA-N domain Sdel_2169 PF05573 NosL Sdel_2172 PF00005 ABC transporter Sdel_2173 PF02687 Sdel_2173 Sdel_2176 PF00990 GGDEF domain Sdel_2178 PF03054 tRNA methyl transferase Sdel_2179 PF00990 GGDEF domain Sdel_2180 PF13192 Thioredoxin domain Sdel_2181 PF03773 Sdel_2181 Sdel_2182 PF01925 Sdel_2182 Sdel_2184 PF01451 Low molecular weight phosphotyrosine protein phosphatase Sdel_2186 PF06723 MreB/Mbl protein Sdel_2187 PF03741 Sdel_2187 Sdel_2188 PF02621 Menaquinone biosynthesis Sdel_2189 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase Sdel_2189 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain Sdel_2190 PF00583 Acetyltransferase (GNAT) family Sdel_2191 PF01554 MatE Sdel_2192 PF00440 Bacterial regulatory proteins, tetR family Sdel_2193 PF00563 EAL domain Sdel_2193 PF00672 HAMP domain Sdel_2193 PF00990 GGDEF domain Sdel_2193 PF13426 PAS domain Sdel_2194 PF14681 Uracil phosphoribosyltransferase Sdel_2195 PF00390 Malic enzyme, N-terminal domain Sdel_2195 PF03949 Malic enzyme, NAD binding domain Sdel_2196 PF00749 tRNA synthetases class I (E and Q), catalytic domain Sdel_2197 PF13145 PPIC-type PPIASE domain Sdel_2197 PF13624 SurA N-terminal domain Sdel_2198 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain Sdel_2198 PF02785 Biotin carboxylase C-terminal domain Sdel_2198 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain Sdel_2199 PF00364 Biotin-requiring enzyme Sdel_2200 PF00692 dUTPase Sdel_2201 PF00583 Acetyltransferase (GNAT) family Sdel_2203 PF07603 Sdel_2203 Sdel_2204 PF10672 S-adenosylmethionine-dependent methyltransferase Sdel_2205 PF12146 Putative lysophospholipase Sdel_2207 PF00669 Bacterial flagellin N-terminal helical region Sdel_2208 PF02719 Polysaccharide biosynthesis protein Sdel_2209 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family Sdel_2210 PF02348 Cytidylyltransferase Sdel_2212 PF13302 Acetyltransferase (GNAT) domain Sdel_2213 PF03102 NeuB family Sdel_2213 PF08666 SAF domain Sdel_2214 PF04007 Sdel_2214 Sdel_2215 PF13578 Methyltransferase domain Sdel_2216 PF00733 Asparagine synthase Sdel_2216 PF13537 Glutamine amidotransferase domain Sdel_2217 PF00534 Glycosyl transferases group 1 Sdel_2217 PF13439 Glycosyltransferase Family 4 Sdel_2218 PF08241 Methyltransferase domain Sdel_2219 PF05050 Methyltransferase FkbM domain Sdel_2220 PF08241 Methyltransferase domain Sdel_2221 PF08241 Methyltransferase domain Sdel_2222 PF16363 Sdel_2222 Sdel_2224 PF04055 Radical SAM superfamily Sdel_2224 PF13186 Iron-sulfur cluster-binding domain Sdel_2225 PF04055 Radical SAM superfamily Sdel_2228 PF01973 Sdel_2228 Sdel_2229 PF00669 Bacterial flagellin N-terminal helical region Sdel_2229 PF00700 Bacterial flagellin C-terminal helical region Sdel_2229 PF07196 Flagellin hook IN motif Sdel_2230 PF01131 DNA topoisomerase Sdel_2230 PF01396 Sdel_2230 Sdel_2230 PF01751 Toprim domain Sdel_2231 PF04055 Radical SAM superfamily Sdel_2231 PF06968 Biotin and Thiamin Synthesis associated domain Sdel_2232 PF00285 Citrate synthase Sdel_2233 PF11741 AMIN domain Sdel_2235 PF00113 Enolase, C-terminal TIM barrel domain Sdel_2235 PF03952 Enolase, N-terminal domain Sdel_2236 PF00154 recA bacterial DNA recombination protein Sdel_2237 PF02621 Menaquinone biosynthesis Sdel_2238 PF01313 Sdel_2238 Sdel_2239 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain Sdel_2240 PF00814 Glycoprotease family Sdel_2241 PF02557 D-alanyl-D-alanine carboxypeptidase Sdel_2242 PF00563 EAL domain Sdel_2242 PF00990 GGDEF domain Sdel_2242 PF08269 Cache domain Sdel_2242 PF13426 PAS domain Sdel_2243 PF02663 FmdE, Molybdenum formylmethanofuran dehydrogenase operon Sdel_2244 PF13649 Methyltransferase domain Sdel_2246 PF00149 Calcineurin-like phosphoesterase Sdel_2247 PF01235 Sdel_2247 Sdel_2248 PF00860 Permease family Sdel_2249 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase Sdel_2249 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal Sdel_2249 PF13288 DXP reductoisomerase C-terminal domain Sdel_2250 PF01148 Cytidylyltransferase family Sdel_2252 PF05670 Sdel_2252 Sdel_2252 PF05833 Fibronectin-binding protein A N-terminus (FbpA) Sdel_2253 PF02595 Glycerate kinase family Sdel_2254 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain Sdel_2255 PF06094 AIG2-like family Sdel_2256 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Sdel_2256 PF12729 Sdel_2256 Sdel_2257 PF00578 AhpC/TSA family Sdel_2257 PF10417 C-terminal domain of 1-Cys peroxiredoxin Sdel_2258 PF11127 Protein of unknown function (DUF2892) Sdel_2259 PF00330 Aconitase family (aconitate hydratase) Sdel_2260 PF12804 MobA-like NTP transferase domain Sdel_2261 PF00563 EAL domain Sdel_2261 PF00990 GGDEF domain Sdel_2262 PF07876 Stress responsive A/B Barrel Domain Sdel_2263 PF02253 Phospholipase A1 Sdel_2264 PF00076 RNA recognition motif Sdel_2265 PF01967 MoaC family Sdel_2266 PF04359 Protein of unknown function (DUF493) Sdel_2269 PF11853 Sdel_2269 Sdel_2270 PF01027 Inhibitor of apoptosis-promoting Bax1 Sdel_2272 PF00581 Rhodanese-like domain Sdel_2274 PF13546 Sdel_2274 Sdel_2275 PF13247 4Fe-4S dicluster domain Sdel_2276 PF00384 Molybdopterin oxidoreductase Sdel_2276 PF01568 Molydopterin dinucleotide binding domain Sdel_2276 PF04879 Molybdopterin oxidoreductase Fe4S4 domain Sdel_2277 PF13489 Methyltransferase domain Sdel_2278 PF03840 Preprotein translocase SecG subunit Sdel_2279 PF01522 Polysaccharide deacetylase Sdel_2280 PF01765 Ribosome recycling factor Sdel_2281 PF00156 Phosphoribosyl transferase domain Sdel_2282 PF06271 Sdel_2282 Sdel_2283 PF12832 MFS_1 like family Sdel_2284 PF03748 Sdel_2284 Sdel_2285 PF11335 Sdel_2285 Sdel_2286 PF04011 LemA family Sdel_2287 PF00009 Elongation factor Tu GTP binding domain Sdel_2287 PF00679 Elongation factor G C-terminus Sdel_2287 PF03144 Elongation factor Tu domain 2 Sdel_2288 PF02120 Flagellar hook-length control protein FliK Sdel_2289 PF03963 Sdel_2289 Sdel_2289 PF13860 FlgD Ig-like domain Sdel_2290 PF00460 Flagella basal body rod protein Sdel_2290 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Sdel_2291 PF00460 Flagella basal body rod protein Sdel_2291 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Sdel_2291 PF07559 Flagellar basal body protein FlaE