Sdel_0003 SM00382 ATPases associated with a variety of cellular activities Sdel_0003 SM00760 Bacterial dnaA protein helix-turn-helix domain Sdel_0004 SM00480 DNA polymerase III beta subunit Sdel_0005 SM00387 Histidine kinase-like ATPases Sdel_0005 SM00433 TopoisomeraseII Sdel_0006 SM00052 Putative diguanylate phosphodiesterase Sdel_0009 SM00986 Uracil DNA glycosylase superfamily Sdel_0009 SM00987 UreE urease accessory protein, C-terminal domain Sdel_0010 SM00478 endonuclease III Sdel_0010 SM00525 Sdel_0010 Sdel_0013 SM00345 helix_turn_helix gluconate operon transcriptional repressor Sdel_0013 SM00895 Sdel_0013 Sdel_0015 SM00671 Sel1-like repeats. Sdel_0016 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Sdel_0023 SM00382 ATPases associated with a variety of cellular activities Sdel_0024 SM00382 ATPases associated with a variety of cellular activities Sdel_0032 SM00382 ATPases associated with a variety of cellular activities Sdel_0039 SM00926 Molybdopterin oxidoreductase Fe4S4 domain Sdel_0055 SM00998 Adenylosuccinate lyase C-terminus Sdel_0062 SM00650 Ribosomal RNA adenine dimethylases Sdel_0063 SM00849 Metallo-beta-lactamase superfamily Sdel_0064 SM00116 Domain in cystathionine beta-synthase and other proteins. Sdel_0065 SM00363 S4 RNA-binding domain Sdel_0066 SM00382 ATPases associated with a variety of cellular activities Sdel_0073 SM00047 Lysozyme subfamily 2 Sdel_0074 SM00937 Sdel_0074 Sdel_0081 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain Sdel_0086 SM00857 Resolvase, N terminal domain Sdel_0096 SM00387 Histidine kinase-like ATPases Sdel_0096 SM00388 His Kinase A (phosphoacceptor) domain Sdel_0097 SM00448 cheY-homologous receiver domain Sdel_0097 SM00862 Transcriptional regulatory protein, C terminal Sdel_0101 SM00382 ATPases associated with a variety of cellular activities Sdel_0104 SM00938 Nitrogen regulatory protein P-II Sdel_0106 SM00448 cheY-homologous receiver domain Sdel_0107 SM00387 Histidine kinase-like ATPases Sdel_0112 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Sdel_0112 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Sdel_0112 SM01049 Sdel_0112 Sdel_0113 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Sdel_0113 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Sdel_0113 SM01049 Sdel_0113 Sdel_0120 SM00448 cheY-homologous receiver domain Sdel_0120 SM00862 Transcriptional regulatory protein, C terminal Sdel_0121 SM00387 Histidine kinase-like ATPases Sdel_0124 SM00062 Bacterial periplasmic substrate-binding proteins Sdel_0124 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. Sdel_0125 SM00382 ATPases associated with a variety of cellular activities Sdel_0130 SM00382 ATPases associated with a variety of cellular activities Sdel_0134 SM00518 AP endonuclease family 2 Sdel_0137 SM00382 ATPases associated with a variety of cellular activities Sdel_0144 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region Sdel_0157 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Sdel_0158 SM00091 PAS domain Sdel_0159 SM00729 Elongator protein 3, MiaB family, Radical SAM Sdel_0160 SM00852 Probable molybdopterin binding domain Sdel_0165 SM00967 RNA 2'-O ribose methyltransferase substrate binding Sdel_0175 SM00729 Elongator protein 3, MiaB family, Radical SAM Sdel_0179 SM00244 prohibitin homologues Sdel_0186 SM00382 ATPases associated with a variety of cellular activities Sdel_0186 SM00994 ClpX C4-type zinc finger Sdel_0186 SM01086 C-terminal, D2-small domain, of ClpB protein Sdel_0189 SM00851 MGS-like domain Sdel_0189 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain Sdel_0202 SM00859 Semialdehyde dehydrogenase, NAD binding domain Sdel_0204 SM00260 Two component signalling adaptor domain Sdel_0204 SM00448 cheY-homologous receiver domain Sdel_0205 SM00073 Histidine Phosphotransfer domain Sdel_0205 SM00260 Two component signalling adaptor domain Sdel_0205 SM00387 Histidine kinase-like ATPases Sdel_0205 SM00448 cheY-homologous receiver domain Sdel_0205 SM01231 Sdel_0205 Sdel_0206 SM00260 Two component signalling adaptor domain Sdel_0210 SM00382 ATPases associated with a variety of cellular activities Sdel_0216 SM00830 Chorismate mutase type II Sdel_0221 SM00861 Transketolase, pyrimidine binding domain Sdel_0225 SM00562 Sdel_0225 Sdel_0234 SM00387 Histidine kinase-like ATPases Sdel_0234 SM00388 His Kinase A (phosphoacceptor) domain Sdel_0235 SM00448 cheY-homologous receiver domain Sdel_0235 SM00862 Transcriptional regulatory protein, C terminal Sdel_0236 SM00905 Dihydroneopterin aldolase Sdel_0237 SM01207 Sdel_0237 Sdel_0254 SM00052 Putative diguanylate phosphodiesterase Sdel_0254 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Sdel_0254 SM00091 PAS domain Sdel_0254 SM00267 diguanylate cyclase Sdel_0255 SM00357 Cold shock protein domain Sdel_0256 SM00387 Histidine kinase-like ATPases Sdel_0256 SM00388 His Kinase A (phosphoacceptor) domain Sdel_0257 SM00448 cheY-homologous receiver domain Sdel_0257 SM00862 Transcriptional regulatory protein, C terminal Sdel_0261 SM00729 Elongator protein 3, MiaB family, Radical SAM Sdel_0262 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Sdel_0265 SM00926 Molybdopterin oxidoreductase Fe4S4 domain Sdel_0268 SM00052 Putative diguanylate phosphodiesterase Sdel_0268 SM00267 diguanylate cyclase Sdel_0268 SM00897 FIST N domain Sdel_0268 SM01204 Sdel_0268 Sdel_0269 SM00926 Molybdopterin oxidoreductase Fe4S4 domain Sdel_0272 SM00448 cheY-homologous receiver domain Sdel_0272 SM00862 Transcriptional regulatory protein, C terminal Sdel_0273 SM00387 Histidine kinase-like ATPases Sdel_0275 SM00729 Elongator protein 3, MiaB family, Radical SAM Sdel_0278 SM01131 Sdel_0278 Sdel_0293 SM00382 ATPases associated with a variety of cellular activities Sdel_0293 SM00962 SRP54-type protein, GTPase domain Sdel_0307 SM01400 Sdel_0307 Sdel_0319 SM00859 Semialdehyde dehydrogenase, NAD binding domain Sdel_0320 SM00382 ATPases associated with a variety of cellular activities Sdel_0320 SM00448 cheY-homologous receiver domain Sdel_0323 SM00434 DNA Topoisomerase IV Sdel_0324 SM01321 Sdel_0324 Sdel_0330 SM00052 Putative diguanylate phosphodiesterase Sdel_0330 SM00267 diguanylate cyclase Sdel_0348 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. Sdel_0348 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. Sdel_0349 SM00649 Ribosomal protein L11/L12 Sdel_0354 SM00663 RNA polymerase I subunit A N-terminus Sdel_0357 SM00838 Elongation factor G C-terminus Sdel_0357 SM00889 Elongation factor G, domain IV Sdel_0358 SM00382 ATPases associated with a variety of cellular activities Sdel_0358 SM00930 Sdel_0358 Sdel_0363 SM00448 cheY-homologous receiver domain Sdel_0363 SM00862 Transcriptional regulatory protein, C terminal Sdel_0365 SM00387 Histidine kinase-like ATPases Sdel_0367 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Sdel_0372 SM01005 Alanine racemase, C-terminal domain Sdel_0373 SM00267 diguanylate cyclase Sdel_0377 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Sdel_0381 SM01004 Delta-aminolevulinic acid dehydratase Sdel_0384 SM00729 Elongator protein 3, MiaB family, Radical SAM Sdel_0390 SM00419 helix_turn_helix, cAMP Regulatory protein Sdel_0392 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Sdel_0392 SM00091 PAS domain Sdel_0392 SM00267 diguanylate cyclase Sdel_0392 SM01079 Sdel_0392 Sdel_0400 SM00382 ATPases associated with a variety of cellular activities Sdel_0408 SM00382 ATPases associated with a variety of cellular activities Sdel_0411 SM00072 Guanylate kinase homologues. Sdel_0411 SM00382 ATPases associated with a variety of cellular activities Sdel_0413 SM00836 DALR anticodon binding domain Sdel_0413 SM01016 Arginyl tRNA synthetase N terminal dom Sdel_0414 SM00477 DNA/RNA non-specific endonuclease Sdel_0414 SM00892 DNA/RNA non-specific endonuclease Sdel_0415 SM00267 diguanylate cyclase Sdel_0421 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain Sdel_0429 SM00729 Elongator protein 3, MiaB family, Radical SAM Sdel_0435 SM00729 Elongator protein 3, MiaB family, Radical SAM Sdel_0437 SM00937 Sdel_0437 Sdel_0442 SM00382 ATPases associated with a variety of cellular activities Sdel_0443 SM00357 Cold shock protein domain Sdel_0443 SM00382 ATPases associated with a variety of cellular activities Sdel_0443 SM00959 Rho termination factor, N-terminal domain Sdel_0448 SM00448 cheY-homologous receiver domain Sdel_0448 SM00862 Transcriptional regulatory protein, C terminal Sdel_0449 SM00387 Histidine kinase-like ATPases Sdel_0449 SM01049 Sdel_0449 Sdel_0455 SM00530 Helix-turn-helix XRE-family like proteins Sdel_0462 SM00244 prohibitin homologues Sdel_0465 SM00487 DEAD-like helicases superfamily Sdel_0465 SM00490 helicase superfamily c-terminal domain Sdel_0467 SM00052 Putative diguanylate phosphodiesterase Sdel_0478 SM00382 ATPases associated with a variety of cellular activities Sdel_0479 SM00382 ATPases associated with a variety of cellular activities Sdel_0486 SM00116 Domain in cystathionine beta-synthase and other proteins. Sdel_0486 SM01240 Sdel_0486 Sdel_0494 SM00463 Small MutS-related domain Sdel_0494 SM00533 DNA-binding domain of DNA mismatch repair MUTS family Sdel_0494 SM00534 ATPase domain of DNA mismatch repair MUTS family Sdel_0509 SM00470 ParB-like nuclease domain Sdel_0515 SM00382 ATPases associated with a variety of cellular activities Sdel_0522 SM00028 Tetratricopeptide repeats Sdel_0525 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. Sdel_0544 SM00347 helix_turn_helix multiple antibiotic resistance protein Sdel_0558 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs Sdel_0558 SM00474 3'-5' exonuclease Sdel_0558 SM00475 5'-3' exonuclease Sdel_0558 SM00482 DNA polymerase A domain Sdel_0562 SM00271 DnaJ molecular chaperone homology domain Sdel_0564 SM00448 cheY-homologous receiver domain Sdel_0564 SM00862 Transcriptional regulatory protein, C terminal Sdel_0565 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Sdel_0565 SM00387 Histidine kinase-like ATPases Sdel_0568 SM00052 Putative diguanylate phosphodiesterase Sdel_0568 SM00091 PAS domain Sdel_0568 SM00267 diguanylate cyclase Sdel_0579 SM00267 diguanylate cyclase Sdel_0580 SM00382 ATPases associated with a variety of cellular activities Sdel_0587 SM00448 cheY-homologous receiver domain Sdel_0588 SM00387 Histidine kinase-like ATPases Sdel_0588 SM00388 His Kinase A (phosphoacceptor) domain Sdel_0588 SM00448 cheY-homologous receiver domain Sdel_0589 SM00671 Sel1-like repeats. Sdel_0591 SM00465 GIY-YIG type nucleases (URI domain) Sdel_0597 SM01209 Sdel_0597 Sdel_0597 SM01210 Sdel_0597 Sdel_0600 SM00316 Ribosomal protein S1-like RNA-binding domain Sdel_0600 SM00322 K homology RNA-binding domain Sdel_0610 SM00874 tRNA synthetase B5 domain Sdel_0610 SM00896 Ferredoxin-fold anticodon binding domain Sdel_0613 SM00316 Ribosomal protein S1-like RNA-binding domain Sdel_0622 SM00841 Elongation factor P, C-terminal Sdel_0622 SM01185 Sdel_0622 Sdel_0624 SM00533 DNA-binding domain of DNA mismatch repair MUTS family Sdel_0624 SM00534 ATPase domain of DNA mismatch repair MUTS family Sdel_0626 SM00316 Ribosomal protein S1-like RNA-binding domain Sdel_0631 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Sdel_0631 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Sdel_0632 SM00481 DNA polymerase alpha chain like domain Sdel_0633 SM00387 Histidine kinase-like ATPases Sdel_0633 SM00388 His Kinase A (phosphoacceptor) domain Sdel_0639 SM00363 S4 RNA-binding domain Sdel_0640 SM00060 Fibronectin type 3 domain Sdel_0642 SM00382 ATPases associated with a variety of cellular activities Sdel_0646 SM01409 Sdel_0646 Sdel_0647 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Sdel_0647 SM00954 Region found in RelA / SpoT proteins Sdel_0648 SM00363 S4 RNA-binding domain Sdel_0650 SM00646 Sdel_0650 Sdel_0651 SM00852 Probable molybdopterin binding domain Sdel_0655 SM00267 diguanylate cyclase Sdel_0658 SM00382 ATPases associated with a variety of cellular activities Sdel_0659 SM00267 diguanylate cyclase Sdel_0659 SM00448 cheY-homologous receiver domain Sdel_0661 SM00257 Lysin motif Sdel_0681 SM00845 GatB domain Sdel_0685 SM00448 cheY-homologous receiver domain Sdel_0685 SM00862 Transcriptional regulatory protein, C terminal Sdel_0687 SM00062 Bacterial periplasmic substrate-binding proteins Sdel_0687 SM00387 Histidine kinase-like ATPases Sdel_0691 SM00100 Cyclic nucleotide-monophosphate binding domain Sdel_0691 SM00419 helix_turn_helix, cAMP Regulatory protein Sdel_0694 SM00382 ATPases associated with a variety of cellular activities Sdel_0698 SM00671 Sel1-like repeats. Sdel_0704 SM00387 Histidine kinase-like ATPases Sdel_0705 SM00448 cheY-homologous receiver domain Sdel_0705 SM00862 Transcriptional regulatory protein, C terminal Sdel_0724 SM00926 Molybdopterin oxidoreductase Fe4S4 domain Sdel_0729 SM00320 WD40 repeats Sdel_0733 SM00450 Rhodanese Homology Domain Sdel_0735 SM00387 Histidine kinase-like ATPases Sdel_0736 SM00448 cheY-homologous receiver domain Sdel_0736 SM00862 Transcriptional regulatory protein, C terminal Sdel_0743 SM00448 cheY-homologous receiver domain Sdel_0743 SM00862 Transcriptional regulatory protein, C terminal Sdel_0744 SM00387 Histidine kinase-like ATPases Sdel_0748 SM00052 Putative diguanylate phosphodiesterase Sdel_0748 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Sdel_0748 SM00091 PAS domain Sdel_0748 SM00448 cheY-homologous receiver domain Sdel_0750 SM00487 DEAD-like helicases superfamily Sdel_0750 SM00490 helicase superfamily c-terminal domain Sdel_0756 SM00883 Chaperonin 10 Kd subunit Sdel_0775 SM00530 Helix-turn-helix XRE-family like proteins Sdel_0785 SM00382 ATPases associated with a variety of cellular activities Sdel_0792 SM00052 Putative diguanylate phosphodiesterase Sdel_0792 SM00267 diguanylate cyclase Sdel_0793 SM00382 ATPases associated with a variety of cellular activities Sdel_0795 SM00421 helix_turn_helix, Lux Regulon Sdel_0802 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor Sdel_0805 SM00926 Molybdopterin oxidoreductase Fe4S4 domain Sdel_0814 SM00382 ATPases associated with a variety of cellular activities Sdel_0818 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Sdel_0819 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Sdel_0819 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Sdel_0827 SM00100 Cyclic nucleotide-monophosphate binding domain Sdel_0827 SM00116 Domain in cystathionine beta-synthase and other proteins. Sdel_0828 SM00479 Sdel_0828 Sdel_0835 SM00138 Methyltransferase, chemotaxis proteins Sdel_0852 SM00487 DEAD-like helicases superfamily Sdel_0852 SM00490 helicase superfamily c-terminal domain Sdel_0860 SM00382 ATPases associated with a variety of cellular activities Sdel_0860 SM00464 Found in ATP-dependent protease La (LON) Sdel_0865 SM00955 Sdel_0865 Sdel_0873 SM00732 Likely ribonuclease with RNase H fold. Sdel_0880 SM00382 ATPases associated with a variety of cellular activities Sdel_0881 SM00382 ATPases associated with a variety of cellular activities Sdel_0881 SM00962 SRP54-type protein, GTPase domain Sdel_0884 SM00322 K homology RNA-binding domain Sdel_0884 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Sdel_0885 SM00382 ATPases associated with a variety of cellular activities Sdel_0892 SM00448 cheY-homologous receiver domain Sdel_0892 SM00862 Transcriptional regulatory protein, C terminal Sdel_0893 SM00052 Putative diguanylate phosphodiesterase Sdel_0893 SM00267 diguanylate cyclase Sdel_0893 SM00448 cheY-homologous receiver domain Sdel_0894 SM00387 Histidine kinase-like ATPases Sdel_0895 SM00897 FIST N domain Sdel_0895 SM01204 Sdel_0895 Sdel_0901 SM00487 DEAD-like helicases superfamily Sdel_0901 SM00490 helicase superfamily c-terminal domain Sdel_0908 SM00479 Sdel_0908 Sdel_0912 SM00448 cheY-homologous receiver domain Sdel_0912 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Sdel_0913 SM00062 Bacterial periplasmic substrate-binding proteins Sdel_0913 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Sdel_0913 SM00091 PAS domain Sdel_0913 SM00387 Histidine kinase-like ATPases Sdel_0913 SM00388 His Kinase A (phosphoacceptor) domain Sdel_0913 SM00448 cheY-homologous receiver domain Sdel_0923 SM00382 ATPases associated with a variety of cellular activities Sdel_0925 SM00479 Sdel_0925 Sdel_0931 SM00530 Helix-turn-helix XRE-family like proteins Sdel_0933 SM00382 ATPases associated with a variety of cellular activities Sdel_0943 SM00382 ATPases associated with a variety of cellular activities Sdel_0958 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Sdel_0967 SM00411 bacterial (prokaryotic) histone like domain Sdel_0969 SM00382 ATPases associated with a variety of cellular activities Sdel_0969 SM00843 Sdel_0969 Sdel_0982 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Sdel_0982 SM00897 FIST N domain Sdel_0982 SM01204 Sdel_0982 Sdel_0984 SM00382 ATPases associated with a variety of cellular activities Sdel_0989 SM00248 ankyrin repeats Sdel_1004 SM00382 ATPases associated with a variety of cellular activities Sdel_1007 SM00382 ATPases associated with a variety of cellular activities Sdel_1015 SM00881 CoA binding domain Sdel_1018 SM00729 Elongator protein 3, MiaB family, Radical SAM Sdel_1021 SM00271 DnaJ molecular chaperone homology domain Sdel_1023 SM00382 ATPases associated with a variety of cellular activities Sdel_1026 SM00363 S4 RNA-binding domain Sdel_1028 SM00450 Rhodanese Homology Domain Sdel_1031 SM00382 ATPases associated with a variety of cellular activities Sdel_1031 SM01086 C-terminal, D2-small domain, of ClpB protein Sdel_1037 SM00382 ATPases associated with a variety of cellular activities Sdel_1039 SM00382 ATPases associated with a variety of cellular activities Sdel_1051 SM00278 Helix-hairpin-helix DNA-binding motif class 1 Sdel_1055 SM00382 ATPases associated with a variety of cellular activities Sdel_1058 SM01130 Sdel_1058 Sdel_1061 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. Sdel_1063 SM00062 Bacterial periplasmic substrate-binding proteins Sdel_1063 SM00267 diguanylate cyclase Sdel_1073 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Sdel_1073 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Sdel_1079 SM00316 Ribosomal protein S1-like RNA-binding domain Sdel_1079 SM00732 Likely ribonuclease with RNase H fold. Sdel_1086 SM00881 CoA binding domain Sdel_1109 SM00729 Elongator protein 3, MiaB family, Radical SAM Sdel_1121 SM00530 Helix-turn-helix XRE-family like proteins Sdel_1131 SM00845 GatB domain Sdel_1163 SM00342 helix_turn_helix, arabinose operon control protein Sdel_1170 SM00382 ATPases associated with a variety of cellular activities Sdel_1173 SM00849 Metallo-beta-lactamase superfamily Sdel_1178 SM00870 Sdel_1178 Sdel_1179 SM00387 Histidine kinase-like ATPases Sdel_1180 SM00448 cheY-homologous receiver domain Sdel_1180 SM00862 Transcriptional regulatory protein, C terminal Sdel_1188 SM00833 Cobalamin synthesis protein cobW C-terminal domain Sdel_1202 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Sdel_1205 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Sdel_1205 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Sdel_1211 SM00267 diguanylate cyclase Sdel_1214 SM00880 Sdel_1214 Sdel_1222 SM00382 ATPases associated with a variety of cellular activities Sdel_1224 SM00965 Secretin and TonB N terminus short domain Sdel_1227 SM00052 Putative diguanylate phosphodiesterase Sdel_1227 SM00267 diguanylate cyclase Sdel_1232 SM00248 ankyrin repeats Sdel_1233 SM00091 PAS domain Sdel_1233 SM00387 Histidine kinase-like ATPases Sdel_1233 SM00388 His Kinase A (phosphoacceptor) domain Sdel_1234 SM00052 Putative diguanylate phosphodiesterase Sdel_1234 SM00267 diguanylate cyclase Sdel_1234 SM00448 cheY-homologous receiver domain Sdel_1235 SM00448 cheY-homologous receiver domain Sdel_1235 SM00862 Transcriptional regulatory protein, C terminal Sdel_1236 SM00986 Uracil DNA glycosylase superfamily Sdel_1236 SM00987 UreE urease accessory protein, C-terminal domain Sdel_1242 SM00530 Helix-turn-helix XRE-family like proteins Sdel_1245 SM00382 ATPases associated with a variety of cellular activities Sdel_1255 SM00382 ATPases associated with a variety of cellular activities Sdel_1257 SM00382 ATPases associated with a variety of cellular activities Sdel_1260 SM00342 helix_turn_helix, arabinose operon control protein Sdel_1262 SM00382 ATPases associated with a variety of cellular activities Sdel_1263 SM00729 Elongator protein 3, MiaB family, Radical SAM Sdel_1270 SM00855 Phosphoglycerate mutase family Sdel_1272 SM00448 cheY-homologous receiver domain Sdel_1272 SM00862 Transcriptional regulatory protein, C terminal Sdel_1273 SM00387 Histidine kinase-like ATPases Sdel_1280 SM01001 AIR carboxylase Sdel_1283 SM00852 Probable molybdopterin binding domain Sdel_1304 SM00450 Rhodanese Homology Domain Sdel_1313 SM00382 ATPases associated with a variety of cellular activities Sdel_1316 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Sdel_1333 SM00267 diguanylate cyclase Sdel_1336 SM00852 Probable molybdopterin binding domain Sdel_1341 SM00478 endonuclease III Sdel_1347 SM00849 Metallo-beta-lactamase superfamily Sdel_1357 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Sdel_1363 SM01387 Sdel_1363 Sdel_1369 SM00904 Riboflavin kinase Sdel_1370 SM00363 S4 RNA-binding domain Sdel_1371 SM00278 Helix-hairpin-helix DNA-binding motif class 1 Sdel_1371 SM00292 breast cancer carboxy-terminal domain Sdel_1371 SM00532 Ligase N family Sdel_1379 SM00729 Elongator protein 3, MiaB family, Radical SAM Sdel_1381 SM00422 helix_turn_helix, mercury resistance Sdel_1382 SM00271 DnaJ molecular chaperone homology domain Sdel_1383 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. Sdel_1384 SM00448 cheY-homologous receiver domain Sdel_1384 SM00862 Transcriptional regulatory protein, C terminal Sdel_1385 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Sdel_1385 SM00387 Histidine kinase-like ATPases Sdel_1385 SM00388 His Kinase A (phosphoacceptor) domain Sdel_1388 SM00957 SecA DEAD-like domain Sdel_1388 SM00958 SecA preprotein cross-linking domain Sdel_1392 SM01245 Sdel_1392 Sdel_1394 SM01234 Sdel_1394 Sdel_1400 SM00382 ATPases associated with a variety of cellular activities Sdel_1400 SM01086 C-terminal, D2-small domain, of ClpB protein Sdel_1401 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. Sdel_1401 SM00245 tail specific protease Sdel_1404 SM01211 Sdel_1404 Sdel_1406 SM00563 Phosphate acyltransferases Sdel_1407 SM00387 Histidine kinase-like ATPases Sdel_1427 SM00842 Cell division protein FtsA Sdel_1428 SM00864 Tubulin/FtsZ family, GTPase domain Sdel_1428 SM00865 Tubulin/FtsZ family, C-terminal domain Sdel_1432 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Sdel_1433 SM00382 ATPases associated with a variety of cellular activities Sdel_1434 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Sdel_1434 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Sdel_1438 SM00798 AICARFT/IMPCHase bienzyme Sdel_1438 SM00851 MGS-like domain Sdel_1442 SM00387 Histidine kinase-like ATPases Sdel_1443 SM00448 cheY-homologous receiver domain Sdel_1443 SM00862 Transcriptional regulatory protein, C terminal Sdel_1451 SM00052 Putative diguanylate phosphodiesterase Sdel_1451 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Sdel_1451 SM00267 diguanylate cyclase Sdel_1456 SM00849 Metallo-beta-lactamase superfamily Sdel_1456 SM01027 Beta-Casp domain Sdel_1460 SM00387 Histidine kinase-like ATPases Sdel_1460 SM00388 His Kinase A (phosphoacceptor) domain Sdel_1461 SM00448 cheY-homologous receiver domain Sdel_1461 SM00862 Transcriptional regulatory protein, C terminal Sdel_1466 SM00855 Phosphoglycerate mutase family Sdel_1470 SM00729 Elongator protein 3, MiaB family, Radical SAM Sdel_1475 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain Sdel_1476 SM00387 Histidine kinase-like ATPases Sdel_1476 SM00388 His Kinase A (phosphoacceptor) domain Sdel_1476 SM00897 FIST N domain Sdel_1476 SM01204 Sdel_1476 Sdel_1477 SM00448 cheY-homologous receiver domain Sdel_1477 SM00862 Transcriptional regulatory protein, C terminal Sdel_1488 SM01018 B12 binding domain Sdel_1491 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Sdel_1494 SM00938 Nitrogen regulatory protein P-II Sdel_1503 SM00926 Molybdopterin oxidoreductase Fe4S4 domain Sdel_1507 SM00947 Carbonic anhydrase Sdel_1516 SM01329 Sdel_1516 Sdel_1526 SM00382 ATPases associated with a variety of cellular activities Sdel_1527 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor Sdel_1535 SM00341 Helicase and RNase D C-terminal Sdel_1535 SM00487 DEAD-like helicases superfamily Sdel_1535 SM00490 helicase superfamily c-terminal domain Sdel_1535 SM00956 Sdel_1535 Sdel_1538 SM00487 DEAD-like helicases superfamily Sdel_1538 SM00490 helicase superfamily c-terminal domain Sdel_1554 SM00899 Sdel_1554 Sdel_1556 SM00382 ATPases associated with a variety of cellular activities Sdel_1572 SM00382 ATPases associated with a variety of cellular activities Sdel_1573 SM00382 ATPases associated with a variety of cellular activities Sdel_1575 SM00342 helix_turn_helix, arabinose operon control protein Sdel_1579 SM00448 cheY-homologous receiver domain Sdel_1579 SM00862 Transcriptional regulatory protein, C terminal Sdel_1580 SM00387 Histidine kinase-like ATPases Sdel_1580 SM00388 His Kinase A (phosphoacceptor) domain Sdel_1584 SM00899 Sdel_1584 Sdel_1597 SM00487 DEAD-like helicases superfamily Sdel_1597 SM00490 helicase superfamily c-terminal domain Sdel_1602 SM00487 DEAD-like helicases superfamily Sdel_1602 SM00490 helicase superfamily c-terminal domain Sdel_1605 SM00479 Sdel_1605 Sdel_1611 SM00478 endonuclease III Sdel_1613 SM00487 DEAD-like helicases superfamily Sdel_1613 SM00490 helicase superfamily c-terminal domain Sdel_1613 SM00982 Sdel_1613 Sdel_1613 SM01058 CarD-like/TRCF domain Sdel_1617 SM00267 diguanylate cyclase Sdel_1622 SM01323 Sdel_1622 Sdel_1626 SM00382 ATPases associated with a variety of cellular activities Sdel_1626 SM01086 C-terminal, D2-small domain, of ClpB protein Sdel_1641 SM00342 helix_turn_helix, arabinose operon control protein Sdel_1641 SM00871 Bacterial transcription activator, effector binding domain Sdel_1650 SM00382 ATPases associated with a variety of cellular activities Sdel_1650 SM00962 SRP54-type protein, GTPase domain Sdel_1650 SM00963 SRP54-type protein, helical bundle domain Sdel_1657 SM01001 AIR carboxylase Sdel_1661 SM01230 Sdel_1661 Sdel_1663 SM00382 ATPases associated with a variety of cellular activities Sdel_1667 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain Sdel_1678 SM00278 Helix-hairpin-helix DNA-binding motif class 1 Sdel_1682 SM00387 Histidine kinase-like ATPases Sdel_1682 SM00388 His Kinase A (phosphoacceptor) domain Sdel_1696 SM00382 ATPases associated with a variety of cellular activities Sdel_1697 SM00052 Putative diguanylate phosphodiesterase Sdel_1697 SM00267 diguanylate cyclase Sdel_1699 SM00790 Aldehyde ferredoxin oxidoreductase, N-terminal domain Sdel_1703 SM00267 diguanylate cyclase Sdel_1708 SM00448 cheY-homologous receiver domain Sdel_1711 SM00867 YceI-like domain Sdel_1713 SM00382 ATPases associated with a variety of cellular activities Sdel_1716 SM00382 ATPases associated with a variety of cellular activities Sdel_1725 SM00382 ATPases associated with a variety of cellular activities Sdel_1737 SM00267 diguanylate cyclase Sdel_1739 SM00831 Cation transporter/ATPase, N-terminus Sdel_1740 SM00671 Sel1-like repeats. Sdel_1746 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family Sdel_1757 SM00028 Tetratricopeptide repeats Sdel_1758 SM00917 LeuA allosteric (dimerisation) domain Sdel_1761 SM00382 ATPases associated with a variety of cellular activities Sdel_1763 SM00448 cheY-homologous receiver domain Sdel_1795 SM00984 UDP binding domain Sdel_1816 SM00028 Tetratricopeptide repeats Sdel_1820 SM00052 Putative diguanylate phosphodiesterase Sdel_1820 SM00267 diguanylate cyclase Sdel_1821 SM00267 diguanylate cyclase Sdel_1826 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Sdel_1826 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Sdel_1827 SM00797 Allophanate hydrolase subunit 2 Sdel_1828 SM00796 Allophanate hydrolase subunit 1 Sdel_1830 SM01228 Sdel_1830 Sdel_1835 SM00825 Beta-ketoacyl synthase Sdel_1837 SM00822 Sdel_1837 Sdel_1841 SM00382 ATPases associated with a variety of cellular activities Sdel_1842 SM00052 Putative diguanylate phosphodiesterase Sdel_1842 SM00267 diguanylate cyclase Sdel_1847 SM00878 Biotin carboxylase C-terminal domain Sdel_1851 SM00487 DEAD-like helicases superfamily Sdel_1851 SM00490 helicase superfamily c-terminal domain Sdel_1854 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Sdel_1856 SM00382 ATPases associated with a variety of cellular activities Sdel_1860 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Sdel_1871 SM00563 Phosphate acyltransferases Sdel_1873 SM00448 cheY-homologous receiver domain Sdel_1873 SM00862 Transcriptional regulatory protein, C terminal Sdel_1874 SM00387 Histidine kinase-like ATPases Sdel_1874 SM00388 His Kinase A (phosphoacceptor) domain Sdel_1876 SM00387 Histidine kinase-like ATPases Sdel_1895 SM00271 DnaJ molecular chaperone homology domain Sdel_1898 SM00890 Domain of unknown function Sdel_1920 SM00448 cheY-homologous receiver domain Sdel_1920 SM00862 Transcriptional regulatory protein, C terminal Sdel_1921 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Sdel_1921 SM00091 PAS domain Sdel_1921 SM00387 Histidine kinase-like ATPases Sdel_1923 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain Sdel_1927 SM00788 Adenylosuccinate synthetase Sdel_1930 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Sdel_1930 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Sdel_1931 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Sdel_1931 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Sdel_1933 SM00861 Transketolase, pyrimidine binding domain Sdel_1935 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. Sdel_1942 SM00662 RNA polymerases D Sdel_1943 SM00363 S4 RNA-binding domain Sdel_1943 SM01390 Sdel_1943 Sdel_1957 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. Sdel_1958 SM01374 Sdel_1958 Sdel_1962 SM00322 K homology RNA-binding domain Sdel_1965 SM01382 Sdel_1965 Sdel_1965 SM01383 Sdel_1965 Sdel_1969 SM01403 Sdel_1969 Sdel_1972 SM00899 Sdel_1972 Sdel_1975 SM00358 Double-stranded RNA binding motif Sdel_1975 SM00535 Ribonuclease III family Sdel_1978 SM00400 zinc finger Sdel_1978 SM00493 Sdel_1978 Sdel_1980 SM00448 cheY-homologous receiver domain Sdel_1982 SM00267 diguanylate cyclase Sdel_1983 SM00448 cheY-homologous receiver domain Sdel_1984 SM00387 Histidine kinase-like ATPases Sdel_1984 SM00388 His Kinase A (phosphoacceptor) domain Sdel_1985 SM00448 cheY-homologous receiver domain Sdel_1987 SM00387 Histidine kinase-like ATPases Sdel_1987 SM00388 His Kinase A (phosphoacceptor) domain Sdel_1988 SM00138 Methyltransferase, chemotaxis proteins Sdel_1989 SM00073 Histidine Phosphotransfer domain Sdel_1989 SM00260 Two component signalling adaptor domain Sdel_1989 SM00387 Histidine kinase-like ATPases Sdel_1989 SM01231 Sdel_1989 Sdel_1991 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Sdel_1992 SM00260 Two component signalling adaptor domain Sdel_1993 SM00448 cheY-homologous receiver domain Sdel_1994 SM00271 DnaJ molecular chaperone homology domain Sdel_1998 SM00382 ATPases associated with a variety of cellular activities Sdel_2004 SM00448 cheY-homologous receiver domain Sdel_2004 SM00862 Transcriptional regulatory protein, C terminal Sdel_2005 SM00387 Histidine kinase-like ATPases Sdel_2006 SM00870 Sdel_2006 Sdel_2019 SM00382 ATPases associated with a variety of cellular activities Sdel_2026 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Sdel_2027 SM00448 cheY-homologous receiver domain Sdel_2028 SM00091 PAS domain Sdel_2028 SM00387 Histidine kinase-like ATPases Sdel_2028 SM00388 His Kinase A (phosphoacceptor) domain Sdel_2032 SM00052 Putative diguanylate phosphodiesterase Sdel_2038 SM00387 Histidine kinase-like ATPases Sdel_2038 SM00388 His Kinase A (phosphoacceptor) domain Sdel_2039 SM00448 cheY-homologous receiver domain Sdel_2039 SM00862 Transcriptional regulatory protein, C terminal Sdel_2051 SM00052 Putative diguanylate phosphodiesterase Sdel_2057 SM00382 ATPases associated with a variety of cellular activities Sdel_2063 SM00382 ATPases associated with a variety of cellular activities Sdel_2075 SM00926 Molybdopterin oxidoreductase Fe4S4 domain Sdel_2080 SM00387 Histidine kinase-like ATPases Sdel_2081 SM00448 cheY-homologous receiver domain Sdel_2088 SM00862 Transcriptional regulatory protein, C terminal Sdel_2090 SM00862 Transcriptional regulatory protein, C terminal Sdel_2093 SM00091 PAS domain Sdel_2094 SM00448 cheY-homologous receiver domain Sdel_2094 SM00862 Transcriptional regulatory protein, C terminal Sdel_2095 SM00388 His Kinase A (phosphoacceptor) domain Sdel_2101 SM00822 Sdel_2101 Sdel_2107 SM00382 ATPases associated with a variety of cellular activities Sdel_2110 SM00825 Beta-ketoacyl synthase Sdel_2123 SM00825 Beta-ketoacyl synthase Sdel_2125 SM00487 DEAD-like helicases superfamily Sdel_2125 SM00490 helicase superfamily c-terminal domain Sdel_2128 SM00460 Transglutaminase/protease-like homologues Sdel_2130 SM00387 Histidine kinase-like ATPases Sdel_2131 SM00448 cheY-homologous receiver domain Sdel_2131 SM00862 Transcriptional regulatory protein, C terminal Sdel_2132 SM00054 EF-hand, calcium binding motif Sdel_2138 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Sdel_2138 SM00091 PAS domain Sdel_2138 SM00387 Histidine kinase-like ATPases Sdel_2139 SM00448 cheY-homologous receiver domain Sdel_2139 SM00862 Transcriptional regulatory protein, C terminal Sdel_2141 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Sdel_2141 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Sdel_2141 SM01049 Sdel_2141 Sdel_2144 SM00925 MltA specific insert domain Sdel_2150 SM00852 Probable molybdopterin binding domain Sdel_2155 SM00382 ATPases associated with a variety of cellular activities Sdel_2159 SM00267 diguanylate cyclase Sdel_2166 SM00382 ATPases associated with a variety of cellular activities Sdel_2172 SM00382 ATPases associated with a variety of cellular activities Sdel_2176 SM00267 diguanylate cyclase Sdel_2179 SM00267 diguanylate cyclase Sdel_2184 SM00226 Low molecular weight phosphatase family Sdel_2189 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase Sdel_2193 SM00052 Putative diguanylate phosphodiesterase Sdel_2193 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Sdel_2193 SM00091 PAS domain Sdel_2193 SM00267 diguanylate cyclase Sdel_2193 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Sdel_2195 SM00919 Malic enzyme, NAD binding domain Sdel_2195 SM01274 Sdel_2195 Sdel_2198 SM00878 Biotin carboxylase C-terminal domain Sdel_2204 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase Sdel_2213 SM00858 Sdel_2213 Sdel_2230 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain Sdel_2230 SM00437 Bacterial DNA topoisomerase I DNA-binding domain Sdel_2230 SM00493 Sdel_2230 Sdel_2231 SM00729 Elongator protein 3, MiaB family, Radical SAM Sdel_2231 SM00876 Biotin and Thiamin Synthesis associated domain Sdel_2235 SM01192 Sdel_2235 Sdel_2235 SM01193 Sdel_2235 Sdel_2236 SM00382 ATPases associated with a variety of cellular activities Sdel_2242 SM00052 Putative diguanylate phosphodiesterase Sdel_2242 SM00267 diguanylate cyclase Sdel_2242 SM01049 Sdel_2242 Sdel_2256 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Sdel_2261 SM00052 Putative diguanylate phosphodiesterase Sdel_2261 SM00267 diguanylate cyclase Sdel_2262 SM00886 Stress responsive A/B Barrel Domain Sdel_2264 SM00360 RNA recognition motif Sdel_2272 SM00450 Rhodanese Homology Domain Sdel_2276 SM00926 Molybdopterin oxidoreductase Fe4S4 domain Sdel_2287 SM00838 Elongation factor G C-terminus