SHALO_0001	SSF48295	TrpR-like
SHALO_0001	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SHALO_0002	SSF55979	DNA clamp
SHALO_0003	SSF54211	Ribosomal protein S5 domain 2-like
SHALO_0003	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
SHALO_0003	SSF56719	Type II DNA topoisomerase
SHALO_0004	SSF141868	EAL domain-like
SHALO_0004	SSF55073	Nucleotide cyclase
SHALO_0005	SSF55620	Tetrahydrobiopterin biosynthesis enzymes-like
SHALO_0006	SSF109604	HD-domain/PDEase-like
SHALO_0008	SSF52141	Uracil-DNA glycosylase-like
SHALO_0009	SSF48150	DNA-glycosylase
SHALO_0009	SSF55811	Nudix
SHALO_0010	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SHALO_0010	SSF54631	CBS-domain pair
SHALO_0011	SSF161098	MetI-like
SHALO_0012	SSF53850	Periplasmic binding protein-like II
SHALO_0013	SSF103473	MFS general substrate transporter
SHALO_0015	SSF117457	FumA C-terminal domain-like
SHALO_0016	SSF46785	"Winged helix" DNA-binding domain
SHALO_0016	SSF48008	GntR ligand-binding domain-like
SHALO_0017	SSF53732	Aconitase iron-sulfur domain
SHALO_0018	SSF52016	LeuD/IlvD-like
SHALO_0020	SSF81901	HCP-like
SHALO_0022	SSF103190	Sensory domain-like
SHALO_0022	SSF55073	Nucleotide cyclase
SHALO_0022	SSF55785	PYP-like sensor domain (PAS domain)
SHALO_0023	SSF56349	DNA breaking-rejoining enzymes
SHALO_0025	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
SHALO_0027	SSF116726	TrkA C-terminal domain-like
SHALO_0029	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
SHALO_0030	SSF52172	CheY-like
SHALO_0032	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
SHALO_0033	SSF158442	DsbB-like
SHALO_0034	SSF52833	Thioredoxin-like
SHALO_0035	SSF69118	AhpD-like
SHALO_0036	SSF51735	NAD(P)-binding Rossmann-fold domains
SHALO_0036	SSF52283	Formate/glycerate dehydrogenase catalytic domain-like
SHALO_0037	SSF52499	Isochorismatase-like hydrolases
SHALO_0038	SSF46689	Homeodomain-like
SHALO_0038	SSF48498	Tetracyclin repressor-like, C-terminal domain
SHALO_0039	SSF55729	Acyl-CoA N-acyltransferases (Nat)
SHALO_0040	SSF46689	Homeodomain-like
SHALO_0040	SSF55136	Probable bacterial effector-binding domain
SHALO_0041	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
SHALO_0042	SSF48371	ARM repeat
SHALO_0044	SSF102114	Radical SAM enzymes
SHALO_0045	SSF143447	AMMECR1-like
SHALO_0047	SSF46689	Homeodomain-like
SHALO_0047	SSF51215	Regulatory protein AraC
SHALO_0048	SSF103481	Multidrug resistance efflux transporter EmrE
SHALO_0049	SSF53474	alpha/beta-Hydrolases
SHALO_0050	SSF51905	FAD/NAD(P)-binding domain
SHALO_0052	SSF50692	ADC-like
SHALO_0052	SSF53706	Formate dehydrogenase/DMSO reductase, domains 1-3
SHALO_0053	SSF56349	DNA breaking-rejoining enzymes
SHALO_0054	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
SHALO_0055	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SHALO_0059	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
SHALO_0060	SSF103642	Sec-C motif
SHALO_0060	SSF48452	TPR-like
SHALO_0060	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SHALO_0061	SSF140931	Fic-like
SHALO_0062	SSF56024	Phospholipase D/nuclease
SHALO_0069	SSF46955	Putative DNA-binding domain
SHALO_0074	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SHALO_0076	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SHALO_0076	SSF55464	Origin of replication-binding domain, RBD-like
SHALO_0077	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SHALO_0078	SSF47413	lambda repressor-like DNA-binding domains
SHALO_0084	SSF143975	IlvD/EDD N-terminal domain-like
SHALO_0084	SSF52016	LeuD/IlvD-like
SHALO_0087	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
SHALO_0088	SSF53448	Nucleotide-diphospho-sugar transferases
SHALO_0089	SSF52317	Class I glutamine amidotransferase-like
SHALO_0089	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SHALO_0090	SSF64182	DHH phosphoesterases
SHALO_0091	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
SHALO_0092	SSF56317	Carbon-nitrogen hydrolase
SHALO_0093	SSF47240	Ferritin-like
SHALO_0094	SSF48452	TPR-like
SHALO_0094	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
SHALO_0095	SSF102114	Radical SAM enzymes
SHALO_0096	SSF51998	PFL-like glycyl radical enzymes
SHALO_0097	SSF53681	Aspartate/glutamate racemase
SHALO_0098	SSF48168	R1 subunit of ribonucleotide reductase, N-terminal domain
SHALO_0098	SSF51998	PFL-like glycyl radical enzymes
SHALO_0099	SSF48557	L-aspartase-like
SHALO_0100	SSF55120	Pseudouridine synthase
SHALO_0101	SSF56529	FAH
SHALO_0102	SSF102114	Radical SAM enzymes
SHALO_0103	SSF53167	Purine and uridine phosphorylases
SHALO_0104	SSF51366	Ribulose-phoshate binding barrel
SHALO_0105	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
SHALO_0106	SSF56281	Metallo-hydrolase/oxidoreductase
SHALO_0107	SSF53697	SIS domain
SHALO_0108	SSF55120	Pseudouridine synthase
SHALO_0108	SSF55174	Alpha-L RNA-binding motif
SHALO_0109	SSF48019	post-AAA+ oligomerization domain-like
SHALO_0109	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SHALO_0111	SSF160544	EscU C-terminal domain-like
SHALO_0113	SSF55326	PurM N-terminal domain-like
SHALO_0113	SSF56042	PurM C-terminal domain-like
SHALO_0114	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SHALO_0115	SSF54506	Diaminopimelate epimerase-like
SHALO_0117	SSF75620	Release factor
SHALO_0118	SSF46992	Ribosomal protein S20
SHALO_0119	SSF51735	NAD(P)-binding Rossmann-fold domains
SHALO_0119	SSF81324	Voltage-gated potassium channels
SHALO_0121	SSF53738	Phosphoglucomutase, first 3 domains
SHALO_0121	SSF55957	Phosphoglucomutase, C-terminal domain
SHALO_0124	SSF52954	Class II aaRS ABD-related
SHALO_0124	SSF55186	ThrRS/AlaRS common domain
SHALO_0124	SSF55681	Class II aaRS and biotin synthetases
SHALO_0125	SSF54364	Translation initiation factor IF3, N-terminal domain
SHALO_0125	SSF55200	Translation initiation factor IF3, C-terminal domain
SHALO_0126	SSF143034	L35p-like
SHALO_0127	SSF74731	Ribosomal protein L20
SHALO_0128	SSF54862	4Fe-4S ferredoxins
SHALO_0129	SSF53041	Resolvase-like
SHALO_0133	SSF52440	PreATP-grasp domain
SHALO_0133	SSF56059	Glutathione synthetase ATP-binding domain-like
SHALO_0134	SSF89963	YajQ-like
SHALO_0137	SSF51645	Malate synthase G
SHALO_0139	SSF46626	Cytochrome c
SHALO_0140	SSF46626	Cytochrome c
SHALO_0142	SSF47384	Homodimeric domain of signal transducing histidine kinase
SHALO_0142	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
SHALO_0143	SSF52172	CheY-like
SHALO_0145	SSF159594	XCC0632-like
SHALO_0147	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SHALO_0148	SSF52091	SpoIIaa-like
SHALO_0149	SSF55068	Peptide methionine sulfoxide reductase
SHALO_0151	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
SHALO_0152	SSF103473	MFS general substrate transporter
SHALO_0153	SSF109604	HD-domain/PDEase-like
SHALO_0155	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
SHALO_0156	SSF53822	Periplasmic binding protein-like I
SHALO_0157	SSF47384	Homodimeric domain of signal transducing histidine kinase
SHALO_0157	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
SHALO_0158	SSF46785	"Winged helix" DNA-binding domain
SHALO_0158	SSF52172	CheY-like
SHALO_0159	SSF50891	Cyclophilin-like
SHALO_0160	SSF54913	GlnB-like
SHALO_0161	SSF111352	Ammonium transporter
SHALO_0162	SSF51430	NAD(P)-linked oxidoreductase
SHALO_0163	SSF51556	Metallo-dependent hydrolases
SHALO_0164	SSF52172	CheY-like
SHALO_0165	SSF47384	Homodimeric domain of signal transducing histidine kinase
SHALO_0165	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
SHALO_0166	SSF141371	PilZ domain-like
SHALO_0167	SSF161098	MetI-like
SHALO_0168	SSF53850	Periplasmic binding protein-like II
SHALO_0169	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SHALO_0171	SSF46626	Cytochrome c
SHALO_0172	SSF103481	Multidrug resistance efflux transporter EmrE
SHALO_0173	SSF81345	ABC transporter involved in vitamin B12 uptake, BtuC
SHALO_0174	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SHALO_0175	SSF53807	"Helical backbone" metal receptor
SHALO_0176	SSF46785	"Winged helix" DNA-binding domain
SHALO_0178	SSF51658	Xylose isomerase-like
SHALO_0179	SSF56935	Porins
SHALO_0180	SSF56801	Acetyl-CoA synthetase-like
SHALO_0181	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SHALO_0183	SSF56770	HydA/Nqo6-like
SHALO_0184	SSF143243	Nqo5-like
SHALO_0185	SSF56762	HydB/Nqo4-like
SHALO_0188	SSF53706	Formate dehydrogenase/DMSO reductase, domains 1-3
SHALO_0188	SSF54292	2Fe-2S ferredoxin-like
SHALO_0188	SSF54862	4Fe-4S ferredoxins
SHALO_0190	SSF54862	4Fe-4S ferredoxins
SHALO_0196	SSF48452	TPR-like
SHALO_0197	SSF53720	ALDH-like
SHALO_0198	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SHALO_0202	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
SHALO_0203	SSF55785	PYP-like sensor domain (PAS domain)
SHALO_0204	SSF102114	Radical SAM enzymes
SHALO_0205	SSF53218	Molybdenum cofactor biosynthesis proteins
SHALO_0205	SSF63882	MoeA N-terminal region -like
SHALO_0207	SSF75217	alpha/beta knot
SHALO_0208	SSF143800	L28p-like
SHALO_0209	SSF53790	Tetrapyrrole methylase
SHALO_0210	SSF55315	L30e-like
SHALO_0210	SSF75217	alpha/beta knot
SHALO_0213	SSF53383	PLP-dependent transferases
SHALO_0214	SSF51735	NAD(P)-binding Rossmann-fold domains
SHALO_0214	SSF55021	ACT-like
SHALO_0214	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
SHALO_0215	SSF52980	Restriction endonuclease-like
SHALO_0216	SSF52833	Thioredoxin-like
SHALO_0217	SSF51905	FAD/NAD(P)-binding domain
SHALO_0218	SSF51735	NAD(P)-binding Rossmann-fold domains
SHALO_0218	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
SHALO_0219	SSF53271	PRTase-like
SHALO_0219	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
SHALO_0220	SSF102114	Radical SAM enzymes
SHALO_0223	SSF101386	all-alpha NTP pyrophosphatases
SHALO_0223	SSF141734	HisI-like
SHALO_0224	SSF117892	Band 7/SPFH domain
SHALO_0225	SSF56752	D-aminoacid aminotransferase-like PLP-dependent enzymes
SHALO_0226	SSF53720	ALDH-like
SHALO_0227	SSF52833	Thioredoxin-like
SHALO_0230	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
SHALO_0231	SSF51161	Trimeric LpxA-like enzymes
SHALO_0232	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SHALO_0232	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)
SHALO_0233	SSF53067	Actin-like ATPase domain
SHALO_0235	SSF48108	Carbamoyl phosphate synthetase, large subunit connection domain
SHALO_0235	SSF52335	Methylglyoxal synthase-like
SHALO_0235	SSF52440	PreATP-grasp domain
SHALO_0235	SSF56059	Glutathione synthetase ATP-binding domain-like
SHALO_0236	SSF55821	YrdC/RibB
SHALO_0240	SSF69572	Activating enzymes of the ubiquitin-like proteins
SHALO_0241	SSF64167	SurE-like
SHALO_0242	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
SHALO_0243	SSF46557	GreA transcript cleavage protein, N-terminal domain
SHALO_0243	SSF54534	FKBP-like
SHALO_0244	SSF51735	NAD(P)-binding Rossmann-fold domains
SHALO_0244	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
SHALO_0245	SSF56300	Metallo-dependent phosphatases
SHALO_0246	SSF50341	CheW-like
SHALO_0246	SSF52172	CheY-like
SHALO_0247	SSF47226	Histidine-containing phosphotransfer domain, HPT domain
SHALO_0247	SSF47384	Homodimeric domain of signal transducing histidine kinase
SHALO_0247	SSF50341	CheW-like
SHALO_0247	SSF52172	CheY-like
SHALO_0247	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
SHALO_0248	SSF50341	CheW-like
SHALO_0249	SSF51730	FAD-linked oxidoreductase
SHALO_0250	SSF56784	HAD-like
SHALO_0251	SSF51569	Aldolase
SHALO_0252	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SHALO_0253	SSF50715	Ribosomal protein L25-like
SHALO_0254	SSF53178	Peptidyl-tRNA hydrolase-like
SHALO_0256	SSF50621	Alanine racemase C-terminal domain-like
SHALO_0256	SSF51419	PLP-binding barrel
SHALO_0257	SSF48600	Chorismate mutase II
SHALO_0257	SSF53850	Periplasmic binding protein-like II
SHALO_0257	SSF55021	ACT-like
SHALO_0258	SSF53383	PLP-dependent transferases
SHALO_0260	SSF48029	FliG
SHALO_0264	SSF160527	V-type ATPase subunit E-like
SHALO_0265	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
SHALO_0265	SSF52922	TK C-terminal domain-like
SHALO_0266	SSF46785	"Winged helix" DNA-binding domain
SHALO_0267	SSF52833	Thioredoxin-like
SHALO_0268	SSF103190	Sensory domain-like
SHALO_0268	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
SHALO_0269	SSF54862	4Fe-4S ferredoxins
SHALO_0270	SSF54919	Nucleoside diphosphate kinase, NDK
SHALO_0272	SSF57829	Zn-binding ribosomal proteins
SHALO_0273	SSF53659	Isocitrate/Isopropylmalate dehydrogenase-like
SHALO_0274	SSF53901	Thiolase-like
SHALO_0275	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
SHALO_0275	SSF51735	NAD(P)-binding Rossmann-fold domains
SHALO_0277	SSF109604	HD-domain/PDEase-like
SHALO_0277	SSF53067	Actin-like ATPase domain
SHALO_0278	SSF54862	4Fe-4S ferredoxins
SHALO_0279	SSF47384	Homodimeric domain of signal transducing histidine kinase
SHALO_0279	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
SHALO_0280	SSF52172	CheY-like
SHALO_0281	SSF55620	Tetrahydrobiopterin biosynthesis enzymes-like
SHALO_0283	SSF142754	NadA-like
SHALO_0284	SSF51690	Nicotinate/Quinolinate PRTase C-terminal domain-like
SHALO_0284	SSF54675	Nicotinate/Quinolinate PRTase N-terminal domain-like
SHALO_0285	SSF160544	EscU C-terminal domain-like
SHALO_0286	SSF64182	DHH phosphoesterases
SHALO_0287	SSF51261	Duplicated hybrid motif
SHALO_0288	SSF63848	Cell-division inhibitor MinC, C-terminal domain
SHALO_0289	SSF54211	Ribosomal protein S5 domain 2-like
SHALO_0290	SSF53067	Actin-like ATPase domain
SHALO_0291	SSF54211	Ribosomal protein S5 domain 2-like
SHALO_0291	SSF55060	GHMP Kinase, C-terminal domain
SHALO_0292	SSF64376	YlxR-like
SHALO_0293	SSF50447	Translation proteins
SHALO_0293	SSF52156	Initiation factor IF2/eIF5b, domain 3
SHALO_0293	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SHALO_0294	SSF89919	Ribosome-binding factor A, RbfA
SHALO_0295	SSF74942	YhbC-like, C-terminal domain
SHALO_0295	SSF75420	YhbC-like, N-terminal domain
SHALO_0296	SSF53597	Dihydrofolate reductase-like
SHALO_0296	SSF53927	Cytidine deaminase-like
SHALO_0297	SSF140663	TTHA0068-like
SHALO_0298	SSF141868	EAL domain-like
SHALO_0298	SSF55073	Nucleotide cyclase
SHALO_0298	SSF55785	PYP-like sensor domain (PAS domain)
SHALO_0299	SSF50249	Nucleic acid-binding proteins
SHALO_0300	SSF47384	Homodimeric domain of signal transducing histidine kinase
SHALO_0300	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
SHALO_0301	SSF46894	C-terminal effector domain of the bipartite response regulators
SHALO_0301	SSF52172	CheY-like
SHALO_0302	SSF103190	Sensory domain-like
SHALO_0303	SSF46626	Cytochrome c
SHALO_0305	SSF102114	Radical SAM enzymes
SHALO_0305	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
SHALO_0307	SSF50692	ADC-like
SHALO_0307	SSF53706	Formate dehydrogenase/DMSO reductase, domains 1-3
SHALO_0308	SSF54862	4Fe-4S ferredoxins
SHALO_0310	SSF141868	EAL domain-like
SHALO_0310	SSF55073	Nucleotide cyclase
SHALO_0310	SSF55785	PYP-like sensor domain (PAS domain)
SHALO_0311	SSF50692	ADC-like
SHALO_0311	SSF53706	Formate dehydrogenase/DMSO reductase, domains 1-3
SHALO_0312	SSF54862	4Fe-4S ferredoxins
SHALO_0314	SSF46894	C-terminal effector domain of the bipartite response regulators
SHALO_0314	SSF52172	CheY-like
SHALO_0315	SSF47384	Homodimeric domain of signal transducing histidine kinase
SHALO_0315	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
SHALO_0316	SSF103190	Sensory domain-like
SHALO_0317	SSF102114	Radical SAM enzymes
SHALO_0319	SSF64182	DHH phosphoesterases
SHALO_0322	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
SHALO_0325	SSF55073	Nucleotide cyclase
SHALO_0326	SSF53850	Periplasmic binding protein-like II
SHALO_0326	SSF55073	Nucleotide cyclase
SHALO_0326	SSF55781	GAF domain-like
SHALO_0326	SSF55785	PYP-like sensor domain (PAS domain)
SHALO_0327	SSF51556	Metallo-dependent hydrolases
SHALO_0328	SSF51735	NAD(P)-binding Rossmann-fold domains
SHALO_0329	SSF46689	Homeodomain-like
SHALO_0330	SSF55821	YrdC/RibB
SHALO_0331	SSF46785	"Winged helix" DNA-binding domain
SHALO_0331	SSF53850	Periplasmic binding protein-like II
SHALO_0333	SSF56300	Metallo-dependent phosphatases
SHALO_0334	SSF56300	Metallo-dependent phosphatases
SHALO_0335	SSF52317	Class I glutamine amidotransferase-like
SHALO_0336	SSF56935	Porins
SHALO_0337	SSF53850	Periplasmic binding protein-like II
SHALO_0339	SSF161098	MetI-like
SHALO_0340	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SHALO_0342	SSF160387	NosL/MerB-like
SHALO_0344	SSF160387	NosL/MerB-like
SHALO_0346	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SHALO_0349	SSF160387	NosL/MerB-like
SHALO_0350	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SHALO_0351	SSF54862	4Fe-4S ferredoxins
SHALO_0352	SSF46626	Cytochrome c
SHALO_0353	SSF46626	Cytochrome c
SHALO_0354	SSF54862	4Fe-4S ferredoxins
SHALO_0355	SSF51126	Pectin lyase-like
SHALO_0357	SSF46626	Cytochrome c
SHALO_0357	SSF49503	Cupredoxins
SHALO_0357	SSF50974	Nitrous oxide reductase, N-terminal domain
SHALO_0358	SSF47384	Homodimeric domain of signal transducing histidine kinase
SHALO_0358	SSF55785	PYP-like sensor domain (PAS domain)
SHALO_0358	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
SHALO_0359	SSF46894	C-terminal effector domain of the bipartite response regulators
SHALO_0359	SSF52172	CheY-like
SHALO_0360	SSF46626	Cytochrome c
SHALO_0361	SSF50022	ISP domain
SHALO_0362	SSF81342	Transmembrane di-heme cytochromes
SHALO_0362	SSF81648	a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
SHALO_0363	SSF46626	Cytochrome c
SHALO_0364	SSF51206	cAMP-binding domain-like
SHALO_0365	SSF56349	DNA breaking-rejoining enzymes
SHALO_0367	SSF56349	DNA breaking-rejoining enzymes
SHALO_0369	SSF47598	Ribbon-helix-helix
SHALO_0370	SSF143011	RelE-like
SHALO_0373	SSF52096	ClpP/crotonase
SHALO_0374	SSF51338	Composite domain of metallo-dependent hydrolases
SHALO_0374	SSF51556	Metallo-dependent hydrolases
SHALO_0375	SSF52304	Type II 3-dehydroquinate dehydratase
SHALO_0376	SSF53092	Creatinase/prolidase N-terminal domain
SHALO_0376	SSF55920	Creatinase/aminopeptidase
SHALO_0377	SSF55083	6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK
SHALO_0378	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SHALO_0379	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SHALO_0381	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
SHALO_0381	SSF88946	Sigma2 domain of RNA polymerase sigma factors
SHALO_0382	SSF101801	Surface presentation of antigens (SPOA)
SHALO_0382	SSF103039	CheC-like
SHALO_0383	SSF101801	Surface presentation of antigens (SPOA)
SHALO_0383	SSF103039	CheC-like
SHALO_0384	SSF102405	MCP/YpsA-like
SHALO_0386	SSF53448	Nucleotide-diphospho-sugar transferases
SHALO_0388	SSF53383	PLP-dependent transferases
SHALO_0389	SSF103481	Multidrug resistance efflux transporter EmrE
SHALO_0390	SSF47473	EF-hand
SHALO_0392	SSF53271	PRTase-like
SHALO_0393	SSF50447	Translation proteins
SHALO_0393	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SHALO_0393	SSF54980	EF-G C-terminal domain-like
SHALO_0394	SSF53271	PRTase-like
SHALO_0396	SSF143422	Transposase IS200-like
SHALO_0397	SSF101904	GyrA/ParC C-terminal domain-like
SHALO_0397	SSF56719	Type II DNA topoisomerase
SHALO_0400	SSF52172	CheY-like
SHALO_0400	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SHALO_0401	SSF51735	NAD(P)-binding Rossmann-fold domains
SHALO_0401	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
SHALO_0403	SSF51726	UROD/MetE-like
SHALO_0404	SSF102114	Radical SAM enzymes
SHALO_0406	SSF53850	Periplasmic binding protein-like II
SHALO_0408	SSF56349	DNA breaking-rejoining enzymes
SHALO_0409	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
SHALO_0412	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
SHALO_0413	SSF47413	lambda repressor-like DNA-binding domains
SHALO_0417	SSF51120	beta-Roll
SHALO_0418	SSF51120	beta-Roll
SHALO_0419	SSF56954	Outer membrane efflux proteins (OEP)
SHALO_0420	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SHALO_0420	SSF90123	ABC transporter transmembrane region
SHALO_0421	SSF111369	HlyD-like secretion proteins
SHALO_0422	SSF53041	Resolvase-like
SHALO_0423	SSF47413	lambda repressor-like DNA-binding domains
SHALO_0428	SSF56300	Metallo-dependent phosphatases
SHALO_0429	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SHALO_0429	SSF75712	Rad50 coiled-coil Zn hook
SHALO_0431	SSF81301	Nucleotidyltransferase
SHALO_0433	SSF51735	NAD(P)-binding Rossmann-fold domains
SHALO_0433	SSF56327	LDH C-terminal domain-like
SHALO_0434	SSF82185	Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain
SHALO_0435	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
SHALO_0437	SSF55909	Pentein
SHALO_0438	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
SHALO_0439	SSF52317	Class I glutamine amidotransferase-like
SHALO_0442	SSF53474	alpha/beta-Hydrolases
SHALO_0445	SSF141868	EAL domain-like
SHALO_0445	SSF55073	Nucleotide cyclase
SHALO_0447	SSF110857	Gamma-glutamyl cyclotransferase-like
SHALO_0448	SSF52833	Thioredoxin-like
SHALO_0450	SSF160920	PSTPO5379-like
SHALO_0451	SSF88713	Glycoside hydrolase/deacetylase
SHALO_0453	SSF54427	NTF2-like
SHALO_0454	SSF103481	Multidrug resistance efflux transporter EmrE
SHALO_0456	SSF51735	NAD(P)-binding Rossmann-fold domains
SHALO_0459	SSF53822	Periplasmic binding protein-like I
SHALO_0462	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SHALO_0463	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SHALO_0464	SSF51730	FAD-linked oxidoreductase
SHALO_0464	SSF53720	ALDH-like
SHALO_0471	SSF50447	Translation proteins
SHALO_0471	SSF50465	EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
SHALO_0471	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SHALO_0474	SSF50104	Translation proteins SH3-like domain
SHALO_0474	SSF82679	N-utilization substance G protein NusG, N-terminal domain
SHALO_0475	SSF46906	Ribosomal protein L11, C-terminal domain
SHALO_0475	SSF54747	Ribosomal L11/L12e N-terminal domain
SHALO_0476	SSF56808	Ribosomal protein L1
SHALO_0477	SSF160369	Ribosomal protein L10-like
SHALO_0478	SSF48300	Ribosomal protein L7/12, oligomerisation (N-terminal) domain
SHALO_0478	SSF54736	ClpS-like
SHALO_0479	SSF64484	beta and beta-prime subunits of DNA dependent RNA-polymerase
SHALO_0480	SSF64484	beta and beta-prime subunits of DNA dependent RNA-polymerase
SHALO_0481	SSF50249	Nucleic acid-binding proteins
SHALO_0482	SSF47973	Ribosomal protein S7
SHALO_0483	SSF50447	Translation proteins
SHALO_0483	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SHALO_0483	SSF54211	Ribosomal protein S5 domain 2-like
SHALO_0483	SSF54980	EF-G C-terminal domain-like
SHALO_0484	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SHALO_0484	SSF55021	ACT-like
SHALO_0485	SSF161098	MetI-like
SHALO_0486	SSF53850	Periplasmic binding protein-like II
SHALO_0488	SSF46785	"Winged helix" DNA-binding domain
SHALO_0488	SSF54909	Dimeric alpha+beta barrel
SHALO_0489	SSF103481	Multidrug resistance efflux transporter EmrE
SHALO_0490	SSF51430	NAD(P)-linked oxidoreductase
SHALO_0491	SSF55469	FMN-dependent nitroreductase-like
SHALO_0493	SSF50692	ADC-like
SHALO_0493	SSF53706	Formate dehydrogenase/DMSO reductase, domains 1-3
SHALO_0494	SSF46626	Cytochrome c
SHALO_0495	SSF46894	C-terminal effector domain of the bipartite response regulators
SHALO_0495	SSF52172	CheY-like
SHALO_0496	SSF53850	Periplasmic binding protein-like II
SHALO_0497	SSF47384	Homodimeric domain of signal transducing histidine kinase
SHALO_0497	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
SHALO_0498	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
SHALO_0499	SSF55785	PYP-like sensor domain (PAS domain)
SHALO_0501	SSF53706	Formate dehydrogenase/DMSO reductase, domains 1-3
SHALO_0501	SSF54292	2Fe-2S ferredoxin-like
SHALO_0501	SSF54862	4Fe-4S ferredoxins
SHALO_0503	SSF54862	4Fe-4S ferredoxins
SHALO_0510	SSF140490	Nqo1C-terminal domain-like
SHALO_0510	SSF142019	Nqo1 FMN-binding domain-like
SHALO_0510	SSF142984	Nqo1 middle domain-like
SHALO_0511	SSF52833	Thioredoxin-like
SHALO_0512	SSF143243	Nqo5-like
SHALO_0512	SSF56762	HydB/Nqo4-like
SHALO_0513	SSF56770	HydA/Nqo6-like
SHALO_0515	SSF141523	L,D-transpeptidase catalytic domain-like
SHALO_0517	SSF50621	Alanine racemase C-terminal domain-like
SHALO_0517	SSF51419	PLP-binding barrel
SHALO_0518	SSF55073	Nucleotide cyclase
SHALO_0520	SSF57868	Metallothionein
SHALO_0521	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
SHALO_0522	SSF46609	Fe,Mn superoxide dismutase (SOD), N-terminal domain
SHALO_0522	SSF54719	Fe,Mn superoxide dismutase (SOD), C-terminal domain
SHALO_0523	SSF81330	Gated mechanosensitive channel
SHALO_0524	SSF55729	Acyl-CoA N-acyltransferases (Nat)
SHALO_0525	SSF142695	RibA-like
SHALO_0526	SSF51569	Aldolase
SHALO_0527	SSF53671	Aspartate/ornithine carbamoyltransferase
SHALO_0529	SSF102114	Radical SAM enzymes
SHALO_0530	SSF46548	alpha-helical ferredoxin
SHALO_0532	SSF52467	DHS-like NAD/FAD-binding domain
SHALO_0533	SSF48371	ARM repeat
SHALO_0534	SSF143120	YefM-like
SHALO_0535	SSF143011	RelE-like
SHALO_0536	SSF53850	Periplasmic binding protein-like II
SHALO_0536	SSF55073	Nucleotide cyclase
SHALO_0537	SSF103473	MFS general substrate transporter
SHALO_0538	SSF54427	NTF2-like
SHALO_0539	SSF46785	"Winged helix" DNA-binding domain
SHALO_0539	SSF51206	cAMP-binding domain-like
SHALO_0540	SSF49764	HSP20-like chaperones
SHALO_0542	SSF81343	Fumarate reductase respiratory complex transmembrane subunits
SHALO_0543	SSF46977	Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain
SHALO_0543	SSF51905	FAD/NAD(P)-binding domain
SHALO_0543	SSF56425	Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
SHALO_0544	SSF46548	alpha-helical ferredoxin
SHALO_0544	SSF54292	2Fe-2S ferredoxin-like
SHALO_0545	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SHALO_0546	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SHALO_0548	SSF51556	Metallo-dependent hydrolases
SHALO_0550	SSF46785	"Winged helix" DNA-binding domain
SHALO_0550	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SHALO_0551	SSF51621	Phosphoenolpyruvate/pyruvate domain
SHALO_0552	SSF47226	Histidine-containing phosphotransfer domain, HPT domain
SHALO_0553	SSF51366	Ribulose-phoshate binding barrel
SHALO_0556	SSF52313	Ribosomal protein S2
SHALO_0557	SSF46934	UBA-like
SHALO_0557	SSF54713	Elongation factor Ts (EF-Ts), dimerisation domain
SHALO_0558	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SHALO_0561	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SHALO_0563	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
SHALO_0563	SSF52374	Nucleotidylyl transferase
SHALO_0563	SSF55190	Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain
SHALO_0564	SSF54060	His-Me finger endonucleases
SHALO_0565	SSF141868	EAL domain-like
SHALO_0565	SSF55073	Nucleotide cyclase
SHALO_0567	SSF56935	Porins
SHALO_0568	SSF46785	"Winged helix" DNA-binding domain
SHALO_0569	SSF46626	Cytochrome c
SHALO_0570	SSF52374	Nucleotidylyl transferase
SHALO_0570	SSF81301	Nucleotidyltransferase
SHALO_0571	SSF51735	NAD(P)-binding Rossmann-fold domains
SHALO_0571	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
SHALO_0572	SSF53748	Phosphoglycerate kinase
SHALO_0573	SSF51351	Triosephosphate isomerase (TIM)
SHALO_0574	SSF51735	NAD(P)-binding Rossmann-fold domains
SHALO_0575	SSF161098	MetI-like
SHALO_0577	SSF50249	Nucleic acid-binding proteins
SHALO_0577	SSF54814	Prokaryotic type KH domain (KH-domain type II)
SHALO_0577	SSF69705	Transcription factor NusA, N-terminal domain
SHALO_0579	SSF102114	Radical SAM enzymes
SHALO_0584	SSF52402	Adenine nucleotide alpha hydrolases-like
SHALO_0585	SSF102114	Radical SAM enzymes
SHALO_0586	SSF52374	Nucleotidylyl transferase
SHALO_0587	SSF75620	Release factor
SHALO_0591	SSF53774	Glutaminase/Asparaginase
SHALO_0592	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SHALO_0593	SSF50249	Nucleic acid-binding proteins
SHALO_0593	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SHALO_0593	SSF68912	Rho N-terminal domain-like
SHALO_0594	SSF64005	Undecaprenyl diphosphate synthase
SHALO_0595	SSF141868	EAL domain-like
SHALO_0595	SSF53850	Periplasmic binding protein-like II
SHALO_0595	SSF55073	Nucleotide cyclase
SHALO_0595	SSF55785	PYP-like sensor domain (PAS domain)
SHALO_0596	SSF56821	Prismane protein-like
SHALO_0597	SSF46689	Homeodomain-like
SHALO_0599	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SHALO_0600	SSF57783	Zinc beta-ribbon
SHALO_0601	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SHALO_0602	SSF55174	Alpha-L RNA-binding motif
SHALO_0603	SSF50022	ISP domain
SHALO_0604	SSF81342	Transmembrane di-heme cytochromes
SHALO_0604	SSF81648	a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
SHALO_0607	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SHALO_0610	SSF46689	Homeodomain-like
SHALO_0611	SSF56954	Outer membrane efflux proteins (OEP)
SHALO_0612	SSF111369	HlyD-like secretion proteins
SHALO_0613	SSF103473	MFS general substrate transporter
SHALO_0614	SSF52402	Adenine nucleotide alpha hydrolases-like
SHALO_0616	SSF47384	Homodimeric domain of signal transducing histidine kinase
SHALO_0616	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
SHALO_0617	SSF52172	CheY-like
SHALO_0621	SSF81301	Nucleotidyltransferase
SHALO_0623	SSF56935	Porins
SHALO_0624	SSF143120	YefM-like
SHALO_0625	SSF143011	RelE-like
SHALO_0628	SSF143011	RelE-like
SHALO_0629	SSF143120	YefM-like
SHALO_0630	SSF143011	RelE-like
SHALO_0632	SSF81301	Nucleotidyltransferase
SHALO_0634	SSF53822	Periplasmic binding protein-like I
SHALO_0637	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SHALO_0638	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SHALO_0647	SSF142433	CinA-like
SHALO_0648	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
SHALO_0648	SSF50677	ValRS/IleRS/LeuRS editing domain
SHALO_0648	SSF52374	Nucleotidylyl transferase
SHALO_0650	SSF75304	Amidase signature (AS) enzymes
SHALO_0651	SSF51412	Inosine monophosphate dehydrogenase (IMPDH)
SHALO_0651	SSF54631	CBS-domain pair
SHALO_0652	SSF53474	alpha/beta-Hydrolases
SHALO_0653	SSF116842	XseB-like
SHALO_0654	SSF56317	Carbon-nitrogen hydrolase
SHALO_0655	SSF69572	Activating enzymes of the ubiquitin-like proteins
SHALO_0656	SSF53383	PLP-dependent transferases
SHALO_0657	SSF51984	MurCD N-terminal domain
SHALO_0657	SSF53244	MurD-like peptide ligases, peptide-binding domain
SHALO_0657	SSF53623	MurD-like peptide ligases, catalytic domain
SHALO_0659	SSF160443	SMR domain-like
SHALO_0659	SSF48334	DNA repair protein MutS, domain III
SHALO_0659	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SHALO_0660	SSF53187	Zn-dependent exopeptidases
SHALO_0660	SSF55031	Bacterial exopeptidase dimerisation domain
SHALO_0661	SSF55298	YjgF-like
SHALO_0662	SSF51905	FAD/NAD(P)-binding domain
SHALO_0663	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
SHALO_0665	SSF55729	Acyl-CoA N-acyltransferases (Nat)
SHALO_0666	SSF50156	PDZ domain-like
SHALO_0666	SSF52096	ClpP/crotonase
SHALO_0667	SSF103039	CheC-like
SHALO_0668	SSF50800	PK beta-barrel domain-like
SHALO_0668	SSF51621	Phosphoenolpyruvate/pyruvate domain
SHALO_0668	SSF52935	PK C-terminal domain-like
SHALO_0669	SSF141091	L21p-like
SHALO_0670	SSF110324	Ribosomal L27 protein-like
SHALO_0671	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SHALO_0671	SSF82051	Obg GTP-binding protein N-terminal domain
SHALO_0672	SSF53633	Carbamate kinase-like
SHALO_0673	SSF50486	FMT C-terminal domain-like
SHALO_0673	SSF53328	Formyltransferase
SHALO_0674	SSF55681	Class II aaRS and biotin synthetases
SHALO_0675	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SHALO_0676	SSF110849	ParB/Sulfiredoxin
SHALO_0679	SSF47928	N-terminal domain of the delta subunit of the F1F0-ATP synthase
SHALO_0680	SSF47917	C-terminal domain of alpha and beta subunits of F1 ATP synthase
SHALO_0680	SSF50615	N-terminal domain of alpha and beta subunits of F1 ATP synthase
SHALO_0680	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SHALO_0681	SSF52943	ATP synthase (F1-ATPase), gamma subunit
SHALO_0682	SSF47917	C-terminal domain of alpha and beta subunits of F1 ATP synthase
SHALO_0682	SSF50615	N-terminal domain of alpha and beta subunits of F1 ATP synthase
SHALO_0682	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SHALO_0683	SSF51344	Epsilon subunit of F1F0-ATP synthase N-terminal domain
SHALO_0687	SSF69304	Tricorn protease N-terminal domain
SHALO_0688	SSF103088	OmpA-like
SHALO_0689	SSF48452	TPR-like
SHALO_0690	SSF54534	FKBP-like
SHALO_0691	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SHALO_0692	SSF52151	FabD/lysophospholipase-like
SHALO_0692	SSF55048	Probable ACP-binding domain of malonyl-CoA ACP transacylase
SHALO_0693	SSF53167	Purine and uridine phosphorylases
SHALO_0694	SSF52402	Adenine nucleotide alpha hydrolases-like
SHALO_0696	SSF51395	FMN-linked oxidoreductases
SHALO_0696	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
SHALO_0696	SSF69336	Alpha subunit of glutamate synthase, C-terminal domain
SHALO_0697	SSF46548	alpha-helical ferredoxin
SHALO_0697	SSF51971	Nucleotide-binding domain
SHALO_0698	SSF56655	Carbohydrate phosphatase
SHALO_0699	SSF52096	ClpP/crotonase
SHALO_0700	SSF75217	alpha/beta knot
SHALO_0701	SSF109635	DnaK suppressor protein DksA, alpha-hairpin domain
SHALO_0701	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)
SHALO_0703	SSF51395	FMN-linked oxidoreductases
SHALO_0707	SSF101801	Surface presentation of antigens (SPOA)
SHALO_0708	SSF52833	Thioredoxin-like
SHALO_0710	SSF51161	Trimeric LpxA-like enzymes
SHALO_0712	SSF50475	FMN-binding split barrel
SHALO_0713	SSF81301	Nucleotidyltransferase
SHALO_0714	SSF55729	Acyl-CoA N-acyltransferases (Nat)
SHALO_0718	SSF103039	CheC-like
SHALO_0721	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SHALO_0722	SSF118215	Proton glutamate symport protein
SHALO_0723	SSF118215	Proton glutamate symport protein
SHALO_0724	SSF109604	HD-domain/PDEase-like
SHALO_0725	SSF47807	5' to 3' exonuclease, C-terminal subdomain
SHALO_0725	SSF53098	Ribonuclease H-like
SHALO_0725	SSF56672	DNA/RNA polymerases
SHALO_0725	SSF88723	PIN domain-like
SHALO_0728	SSF46565	Chaperone J-domain
SHALO_0728	SSF49493	HSP40/DnaJ peptide-binding domain
SHALO_0728	SSF57938	DnaJ/Hsp40 cysteine-rich domain
SHALO_0735	SSF46894	C-terminal effector domain of the bipartite response regulators
SHALO_0735	SSF52172	CheY-like
SHALO_0736	SSF158472	HAMP domain-like
SHALO_0736	SSF47384	Homodimeric domain of signal transducing histidine kinase
SHALO_0736	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
SHALO_0737	SSF111304	Recombination protein RecR
SHALO_0738	SSF55073	Nucleotide cyclase
SHALO_0738	SSF55781	GAF domain-like
SHALO_0738	SSF55785	PYP-like sensor domain (PAS domain)
SHALO_0740	SSF56801	Acetyl-CoA synthetase-like
SHALO_0741	SSF51735	NAD(P)-binding Rossmann-fold domains
SHALO_0741	SSF53223	Aminoacid dehydrogenase-like, N-terminal domain
SHALO_0742	SSF56322	ADC synthase
SHALO_0743	SSF110997	Sporulation related repeat
SHALO_0744	SSF56747	Prim-pol domain
SHALO_0745	SSF53383	PLP-dependent transferases
SHALO_0746	SSF50249	Nucleic acid-binding proteins
SHALO_0746	SSF55681	Class II aaRS and biotin synthetases
SHALO_0747	SSF46785	"Winged helix" DNA-binding domain
SHALO_0749	SSF55073	Nucleotide cyclase
SHALO_0750	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SHALO_0751	SSF141000	Glu-tRNAGln amidotransferase C subunit
SHALO_0753	SSF50998	Quinoprotein alcohol dehydrogenase-like
SHALO_0755	SSF53067	Actin-like ATPase domain
SHALO_0756	SSF53850	Periplasmic binding protein-like II
SHALO_0757	SSF52172	CheY-like
SHALO_0758	SSF47384	Homodimeric domain of signal transducing histidine kinase
SHALO_0758	SSF52172	CheY-like
SHALO_0758	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
SHALO_0759	SSF81901	HCP-like
SHALO_0760	SSF47226	Histidine-containing phosphotransfer domain, HPT domain
SHALO_0761	SSF46600	C-terminal UvrC-binding domain of UvrB
SHALO_0761	SSF47781	RuvA domain 2-like
SHALO_0761	SSF82771	GIY-YIG endonuclease
SHALO_0764	SSF46977	Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain
SHALO_0764	SSF51905	FAD/NAD(P)-binding domain
SHALO_0764	SSF56425	Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
SHALO_0766	SSF52317	Class I glutamine amidotransferase-like
SHALO_0766	SSF52402	Adenine nucleotide alpha hydrolases-like
SHALO_0766	SSF54810	GMP synthetase C-terminal dimerisation domain
SHALO_0767	SSF69618	HemD-like
SHALO_0768	SSF51246	Rudiment single hybrid motif
SHALO_0768	SSF52440	PreATP-grasp domain
SHALO_0768	SSF56059	Glutathione synthetase ATP-binding domain-like
SHALO_0771	SSF50249	Nucleic acid-binding proteins
SHALO_0771	SSF54211	Ribosomal protein S5 domain 2-like
SHALO_0771	SSF54791	Eukaryotic type KH-domain (KH-domain type I)
SHALO_0771	SSF55666	Ribonuclease PH domain 2-like
SHALO_0772	SSF81333	F1F0 ATP synthase subunit C
SHALO_0774	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
SHALO_0775	SSF56349	DNA breaking-rejoining enzymes
SHALO_0776	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
SHALO_0779	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SHALO_0787	SSF47384	Homodimeric domain of signal transducing histidine kinase
SHALO_0787	SSF55785	PYP-like sensor domain (PAS domain)
SHALO_0787	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
SHALO_0788	SSF46894	C-terminal effector domain of the bipartite response regulators
SHALO_0788	SSF52172	CheY-like
SHALO_0791	SSF46548	alpha-helical ferredoxin
SHALO_0791	SSF55103	FAD-linked oxidases, C-terminal domain
SHALO_0791	SSF56176	FAD-binding/transporter-associated domain-like
SHALO_0793	SSF51230	Single hybrid motif
SHALO_0793	SSF51569	Aldolase
SHALO_0793	SSF89000	post-HMGL domain-like
SHALO_0795	SSF53795	PEP carboxykinase-like
SHALO_0795	SSF68923	PEP carboxykinase N-terminal domain
SHALO_0796	SSF48557	L-aspartase-like
SHALO_0797	SSF54197	HIT-like
SHALO_0798	SSF46589	tRNA-binding arm
SHALO_0798	SSF55681	Class II aaRS and biotin synthetases
SHALO_0799	SSF46955	Putative DNA-binding domain
SHALO_0799	SSF50249	Nucleic acid-binding proteins
SHALO_0799	SSF54991	Anticodon-binding domain of PheRS
SHALO_0799	SSF55681	Class II aaRS and biotin synthetases
SHALO_0800	SSF55205	EPT/RTPC-like
SHALO_0802	SSF50249	Nucleic acid-binding proteins
SHALO_0804	SSF143548	Serine metabolism enzymes domain
SHALO_0804	SSF51735	NAD(P)-binding Rossmann-fold domains
SHALO_0804	SSF52283	Formate/glycerate dehydrogenase catalytic domain-like
SHALO_0804	SSF55021	ACT-like
SHALO_0805	SSF56954	Outer membrane efflux proteins (OEP)
SHALO_0806	SSF111369	HlyD-like secretion proteins
SHALO_0807	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
SHALO_0807	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
SHALO_0807	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
SHALO_0808	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
SHALO_0808	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
SHALO_0811	SSF50104	Translation proteins SH3-like domain
SHALO_0811	SSF50249	Nucleic acid-binding proteins
SHALO_0812	SSF52317	Class I glutamine amidotransferase-like
SHALO_0813	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
SHALO_0814	SSF48334	DNA repair protein MutS, domain III
SHALO_0814	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SHALO_0814	SSF53150	DNA repair protein MutS, domain II
SHALO_0814	SSF55271	DNA repair protein MutS, domain I
SHALO_0817	SSF160996	HI0933 insert domain-like
SHALO_0817	SSF51905	FAD/NAD(P)-binding domain
SHALO_0818	SSF53474	alpha/beta-Hydrolases
SHALO_0819	SSF103515	Autotransporter
SHALO_0820	SSF55073	Nucleotide cyclase
SHALO_0824	SSF81301	Nucleotidyltransferase
SHALO_0825	SSF141868	EAL domain-like
SHALO_0825	SSF55073	Nucleotide cyclase
SHALO_0826	SSF53474	alpha/beta-Hydrolases
SHALO_0827	SSF51395	FMN-linked oxidoreductases
SHALO_0828	SSF56954	Outer membrane efflux proteins (OEP)
SHALO_0829	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
SHALO_0829	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
SHALO_0829	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
SHALO_0830	SSF111369	HlyD-like secretion proteins
SHALO_0831	SSF55785	PYP-like sensor domain (PAS domain)
SHALO_0832	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
SHALO_0834	SSF89550	PHP domain-like
SHALO_0836	SSF47384	Homodimeric domain of signal transducing histidine kinase
SHALO_0836	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
SHALO_0837	SSF53383	PLP-dependent transferases
SHALO_0839	SSF51735	NAD(P)-binding Rossmann-fold domains
SHALO_0843	SSF55120	Pseudouridine synthase
SHALO_0843	SSF55174	Alpha-L RNA-binding motif
SHALO_0844	SSF49265	Fibronectin type III
SHALO_0845	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
SHALO_0846	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SHALO_0848	SSF51261	Duplicated hybrid motif
SHALO_0849	SSF53633	Carbamate kinase-like
SHALO_0850	SSF63562	RPB6/omega subunit-like
SHALO_0851	SSF109604	HD-domain/PDEase-like
SHALO_0851	SSF55021	ACT-like
SHALO_0851	SSF81271	TGS-like
SHALO_0851	SSF81301	Nucleotidyltransferase
SHALO_0852	SSF52374	Nucleotidylyl transferase
SHALO_0852	SSF55174	Alpha-L RNA-binding motif
SHALO_0853	SSF51412	Inosine monophosphate dehydrogenase (IMPDH)
SHALO_0854	SSF53187	Zn-dependent exopeptidases
SHALO_0855	SSF53218	Molybdenum cofactor biosynthesis proteins
SHALO_0856	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SHALO_0857	SSF50249	Nucleic acid-binding proteins
SHALO_0857	SSF55261	GAD domain-like
SHALO_0857	SSF55681	Class II aaRS and biotin synthetases
SHALO_0858	SSF55073	Nucleotide cyclase
SHALO_0860	SSF111331	NAD kinase/diacylglycerol kinase-like
SHALO_0861	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SHALO_0863	SSF52172	CheY-like
SHALO_0863	SSF55073	Nucleotide cyclase
SHALO_0864	SSF51556	Metallo-dependent hydrolases
SHALO_0865	SSF53955	Lysozyme-like
SHALO_0865	SSF54106	LysM domain
SHALO_0866	SSF110997	Sporulation related repeat
SHALO_0866	SSF50685	Barwin-like endoglucanases
SHALO_0867	SSF54211	Ribosomal protein S5 domain 2-like
SHALO_0868	SSF56784	HAD-like
SHALO_0871	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SHALO_0872	SSF55729	Acyl-CoA N-acyltransferases (Nat)
SHALO_0874	SSF56519	Penicillin binding protein dimerisation domain
SHALO_0874	SSF56601	beta-lactamase/transpeptidase-like
SHALO_0875	SSF52317	Class I glutamine amidotransferase-like
SHALO_0876	SSF55486	Metalloproteases ("zincins"), catalytic domain
SHALO_0878	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
SHALO_0878	SSF50249	Nucleic acid-binding proteins
SHALO_0878	SSF52374	Nucleotidylyl transferase
SHALO_0880	SSF56655	Carbohydrate phosphatase
SHALO_0881	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SHALO_0883	SSF53955	Lysozyme-like
SHALO_0885	SSF48163	An anticodon-binding domain of class I aminoacyl-tRNA synthetases
SHALO_0885	SSF52374	Nucleotidylyl transferase
SHALO_0886	SSF50715	Ribosomal protein L25-like
SHALO_0886	SSF52374	Nucleotidylyl transferase
SHALO_0886	SSF89095	GatB/YqeY motif
SHALO_0887	SSF53474	alpha/beta-Hydrolases
SHALO_0888	SSF56935	Porins
SHALO_0889	SSF46894	C-terminal effector domain of the bipartite response regulators
SHALO_0889	SSF52172	CheY-like
SHALO_0891	SSF47384	Homodimeric domain of signal transducing histidine kinase
SHALO_0891	SSF53850	Periplasmic binding protein-like II
SHALO_0891	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
SHALO_0892	SSF103190	Sensory domain-like
SHALO_0894	SSF46894	C-terminal effector domain of the bipartite response regulators
SHALO_0894	SSF52172	CheY-like
SHALO_0895	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
SHALO_0896	SSF48452	TPR-like
SHALO_0897	SSF46785	"Winged helix" DNA-binding domain
SHALO_0897	SSF53850	Periplasmic binding protein-like II
SHALO_0898	SSF46977	Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain
SHALO_0898	SSF51905	FAD/NAD(P)-binding domain
SHALO_0898	SSF56425	Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
SHALO_0899	SSF46548	alpha-helical ferredoxin
SHALO_0899	SSF54292	2Fe-2S ferredoxin-like
SHALO_0901	SSF53850	Periplasmic binding protein-like II
SHALO_0902	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
SHALO_0904	SSF46785	"Winged helix" DNA-binding domain
SHALO_0904	SSF51206	cAMP-binding domain-like
SHALO_0905	SSF48695	Multiheme cytochromes
SHALO_0906	SSF48695	Multiheme cytochromes
SHALO_0909	SSF46785	"Winged helix" DNA-binding domain
SHALO_0909	SSF51206	cAMP-binding domain-like
SHALO_0911	SSF53474	alpha/beta-Hydrolases
SHALO_0912	SSF47384	Homodimeric domain of signal transducing histidine kinase
SHALO_0912	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
SHALO_0913	SSF46894	C-terminal effector domain of the bipartite response regulators
SHALO_0913	SSF52172	CheY-like
SHALO_0915	SSF51905	FAD/NAD(P)-binding domain
SHALO_0915	SSF56425	Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
SHALO_0916	SSF48695	Multiheme cytochromes
SHALO_0917	SSF46689	Homeodomain-like
SHALO_0917	SSF53041	Resolvase-like
SHALO_0920	SSF48452	TPR-like
SHALO_0920	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
SHALO_0921	SSF53448	Nucleotide-diphospho-sugar transferases
SHALO_0922	SSF56112	Protein kinase-like (PK-like)
SHALO_0923	SSF52821	Rhodanese/Cell cycle control phosphatase
SHALO_0925	SSF46548	alpha-helical ferredoxin
SHALO_0927	SSF102114	Radical SAM enzymes
SHALO_0927	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
SHALO_0929	SSF54862	4Fe-4S ferredoxins
SHALO_0930	SSF46689	Homeodomain-like
SHALO_0931	SSF51735	NAD(P)-binding Rossmann-fold domains
SHALO_0932	SSF51690	Nicotinate/Quinolinate PRTase C-terminal domain-like
SHALO_0932	SSF54675	Nicotinate/Quinolinate PRTase N-terminal domain-like
SHALO_0933	SSF46689	Homeodomain-like
SHALO_0933	SSF46767	Methylated DNA-protein cysteine methyltransferase, C-terminal domain
SHALO_0933	SSF53155	Methylated DNA-protein cysteine methyltransferase domain
SHALO_0934	SSF103481	Multidrug resistance efflux transporter EmrE
SHALO_0935	SSF46785	"Winged helix" DNA-binding domain
SHALO_0935	SSF55729	Acyl-CoA N-acyltransferases (Nat)
SHALO_0936	SSF55729	Acyl-CoA N-acyltransferases (Nat)
SHALO_0937	SSF50447	Translation proteins
SHALO_0937	SSF55186	ThrRS/AlaRS common domain
SHALO_0939	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
SHALO_0941	SSF46626	Cytochrome c
SHALO_0941	SSF49503	Cupredoxins
SHALO_0941	SSF81464	Cytochrome c oxidase subunit II-like, transmembrane region
SHALO_0943	SSF81452	Cytochrome c oxidase subunit III-like
SHALO_0944	SSF81442	Cytochrome c oxidase subunit I-like
SHALO_0945	SSF52833	Thioredoxin-like
SHALO_0949	SSF50692	ADC-like
SHALO_0949	SSF53706	Formate dehydrogenase/DMSO reductase, domains 1-3
SHALO_0950	SSF54862	4Fe-4S ferredoxins
SHALO_0951	SSF54862	4Fe-4S ferredoxins
SHALO_0952	SSF48695	Multiheme cytochromes
SHALO_0953	SSF54862	4Fe-4S ferredoxins
SHALO_0954	SSF50978	WD40 repeat-like
SHALO_0956	SSF55785	PYP-like sensor domain (PAS domain)
SHALO_0957	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SHALO_0957	SSF81271	TGS-like
SHALO_0961	SSF56935	Porins
SHALO_0963	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
SHALO_0963	SSF88946	Sigma2 domain of RNA polymerase sigma factors
SHALO_0964	SSF52821	Rhodanese/Cell cycle control phosphatase
SHALO_0964	SSF57662	Ferredoxin thioredoxin reductase (FTR), catalytic beta chain
SHALO_0965	SSF89155	TorD-like
SHALO_0966	SSF50692	ADC-like
SHALO_0966	SSF53706	Formate dehydrogenase/DMSO reductase, domains 1-3
SHALO_0967	SSF54862	4Fe-4S ferredoxins
SHALO_0969	SSF52172	CheY-like
SHALO_0970	SSF53850	Periplasmic binding protein-like II
SHALO_0971	SSF47384	Homodimeric domain of signal transducing histidine kinase
SHALO_0971	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
SHALO_0972	SSF46626	Cytochrome c
SHALO_0973	SSF50022	ISP domain
SHALO_0974	SSF81342	Transmembrane di-heme cytochromes
SHALO_0974	SSF81648	a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
SHALO_0975	SSF46626	Cytochrome c
SHALO_0976	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
SHALO_0977	SSF56935	Porins
SHALO_0978	SSF141868	EAL domain-like
SHALO_0978	SSF52172	CheY-like
SHALO_0978	SSF55785	PYP-like sensor domain (PAS domain)
SHALO_0980	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SHALO_0981	SSF55729	Acyl-CoA N-acyltransferases (Nat)
SHALO_0983	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
SHALO_0983	SSF51735	NAD(P)-binding Rossmann-fold domains
SHALO_0984	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
SHALO_0985	SSF51569	Aldolase
SHALO_0985	SSF89000	post-HMGL domain-like
SHALO_0986	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
SHALO_0988	SSF109604	HD-domain/PDEase-like
SHALO_0988	SSF52172	CheY-like
SHALO_0988	SSF55785	PYP-like sensor domain (PAS domain)
SHALO_0989	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
SHALO_0990	SSF47413	lambda repressor-like DNA-binding domains
SHALO_0992	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
SHALO_0993	SSF46894	C-terminal effector domain of the bipartite response regulators
SHALO_0993	SSF52172	CheY-like
SHALO_0994	SSF56281	Metallo-hydrolase/oxidoreductase
SHALO_0995	SSF52218	Flavoproteins
SHALO_0996	SSF46785	"Winged helix" DNA-binding domain
SHALO_0997	SSF75625	YebC-like
SHALO_0999	SSF53850	Periplasmic binding protein-like II
SHALO_1004	SSF48592	GroEL equatorial domain-like
SHALO_1004	SSF52029	GroEL apical domain-like
SHALO_1004	SSF54849	GroEL-intermediate domain like
SHALO_1005	SSF50129	GroES-like
SHALO_1007	SSF56349	DNA breaking-rejoining enzymes
SHALO_1016	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SHALO_1017	SSF52743	Subtilisin-like
SHALO_1019	SSF56349	DNA breaking-rejoining enzymes
SHALO_1023	SSF143120	YefM-like
SHALO_1025	SSF52980	Restriction endonuclease-like
SHALO_1029	SSF140931	Fic-like
SHALO_1030	SSF47413	lambda repressor-like DNA-binding domains
SHALO_1033	SSF141868	EAL domain-like
SHALO_1033	SSF55073	Nucleotide cyclase
SHALO_1034	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
SHALO_1035	SSF52172	CheY-like
SHALO_1036	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
SHALO_1037	SSF56954	Outer membrane efflux proteins (OEP)
SHALO_1039	SSF141868	EAL domain-like
SHALO_1039	SSF55073	Nucleotide cyclase
SHALO_1040	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SHALO_1040	SSF90123	ABC transporter transmembrane region
SHALO_1042	SSF46894	C-terminal effector domain of the bipartite response regulators
SHALO_1043	SSF51120	beta-Roll
SHALO_1045	SSF54001	Cysteine proteinases
SHALO_1046	SSF56059	Glutathione synthetase ATP-binding domain-like
SHALO_1047	SSF54001	Cysteine proteinases
SHALO_1048	SSF143011	RelE-like
SHALO_1049	SSF47413	lambda repressor-like DNA-binding domains
SHALO_1051	SSF53187	Zn-dependent exopeptidases
SHALO_1052	SSF53187	Zn-dependent exopeptidases
SHALO_1053	SSF54001	Cysteine proteinases
SHALO_1055	SSF56059	Glutathione synthetase ATP-binding domain-like
SHALO_1060	SSF47188	Hemerythrin-like
SHALO_1061	SSF56784	HAD-like
SHALO_1061	SSF81653	Calcium ATPase, transduction domain A
SHALO_1061	SSF81665	Calcium ATPase, transmembrane domain M
SHALO_1062	SSF46785	"Winged helix" DNA-binding domain
SHALO_1064	SSF103657	BAR/IMD domain-like
SHALO_1065	SSF53383	PLP-dependent transferases
SHALO_1066	SSF46689	Homeodomain-like
SHALO_1066	SSF46767	Methylated DNA-protein cysteine methyltransferase, C-terminal domain
SHALO_1066	SSF53155	Methylated DNA-protein cysteine methyltransferase domain
SHALO_1066	SSF55729	Acyl-CoA N-acyltransferases (Nat)
SHALO_1067	SSF46689	Homeodomain-like
SHALO_1068	SSF69118	AhpD-like
SHALO_1069	SSF101898	NHL repeat
SHALO_1070	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
SHALO_1071	SSF103190	Sensory domain-like
SHALO_1071	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
SHALO_1072	SSF51391	Thiamin phosphate synthase
SHALO_1074	SSF47240	Ferritin-like
SHALO_1079	SSF100950	NagB/RpiA/CoA transferase-like
SHALO_1079	SSF54862	4Fe-4S ferredoxins
SHALO_1080	SSF100950	NagB/RpiA/CoA transferase-like
SHALO_1081	SSF103481	Multidrug resistance efflux transporter EmrE
SHALO_1082	SSF52266	SGNH hydrolase
SHALO_1084	SSF51206	cAMP-binding domain-like
SHALO_1084	SSF54631	CBS-domain pair
SHALO_1085	SSF53098	Ribonuclease H-like
SHALO_1087	SSF51726	UROD/MetE-like
SHALO_1090	SSF51182	RmlC-like cupins
SHALO_1091	SSF53474	alpha/beta-Hydrolases
SHALO_1092	SSF52499	Isochorismatase-like hydrolases
SHALO_1093	SSF47757	Chemotaxis receptor methyltransferase CheR, N-terminal domain
SHALO_1093	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
SHALO_1094	SSF52738	Methylesterase CheB, C-terminal domain
SHALO_1095	SSF52949	Macro domain-like
SHALO_1095	SSF53187	Zn-dependent exopeptidases
SHALO_1097	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
SHALO_1098	SSF53271	PRTase-like
SHALO_1100	SSF89623	Ribose/Galactose isomerase RpiB/AlsB
SHALO_1102	SSF51306	LexA/Signal peptidase
SHALO_1103	SSF51735	NAD(P)-binding Rossmann-fold domains
SHALO_1103	SSF53223	Aminoacid dehydrogenase-like, N-terminal domain
SHALO_1104	SSF46626	Cytochrome c
SHALO_1105	SSF53383	PLP-dependent transferases
SHALO_1108	SSF102114	Radical SAM enzymes
SHALO_1109	SSF63411	LuxS/MPP-like metallohydrolase
SHALO_1110	SSF50249	Nucleic acid-binding proteins
SHALO_1110	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SHALO_1111	SSF69754	Ribosome binding protein Y (YfiA homologue)
SHALO_1113	SSF54523	Pili subunits
SHALO_1115	SSF141072	CalX-like
SHALO_1115	SSF49899	Concanavalin A-like lectins/glucanases
SHALO_1115	SSF89260	Collagen-binding domain
SHALO_1116	SSF141457	BH3618-like
SHALO_1118	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SHALO_1118	SSF54211	Ribosomal protein S5 domain 2-like
SHALO_1118	SSF88697	PUA domain-like
SHALO_1119	SSF46911	Ribosomal protein S18
SHALO_1120	SSF50249	Nucleic acid-binding proteins
SHALO_1121	SSF54995	Ribosomal protein S6
SHALO_1122	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SHALO_1123	SSF50249	Nucleic acid-binding proteins
SHALO_1124	SSF109604	HD-domain/PDEase-like
SHALO_1125	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
SHALO_1125	SSF51735	NAD(P)-binding Rossmann-fold domains
SHALO_1126	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SHALO_1127	SSF55229	Cell division protein MinE topological specificity domain
SHALO_1128	SSF88713	Glycoside hydrolase/deacetylase
SHALO_1129	SSF102405	MCP/YpsA-like
SHALO_1131	SSF55826	YbaK/ProRS associated domain
SHALO_1134	SSF143548	Serine metabolism enzymes domain
SHALO_1135	SSF53098	Ribonuclease H-like
SHALO_1137	SSF53383	PLP-dependent transferases
SHALO_1138	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
SHALO_1139	SSF54285	MoaD/ThiS
SHALO_1140	SSF56214	4'-phosphopantetheinyl transferase
SHALO_1142	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SHALO_1142	SSF54211	Ribosomal protein S5 domain 2-like
SHALO_1143	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SHALO_1144	SSF52833	Thioredoxin-like
SHALO_1145	SSF100950	NagB/RpiA/CoA transferase-like
SHALO_1146	SSF109604	HD-domain/PDEase-like
SHALO_1146	SSF54791	Eukaryotic type KH-domain (KH-domain type I)
SHALO_1147	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SHALO_1147	SSF90123	ABC transporter transmembrane region
SHALO_1150	SSF51306	LexA/Signal peptidase
SHALO_1152	SSF50891	Cyclophilin-like
SHALO_1153	SSF50978	WD40 repeat-like
SHALO_1154	SSF52172	CheY-like
SHALO_1154	SSF55785	PYP-like sensor domain (PAS domain)
SHALO_1155	SSF52172	CheY-like
SHALO_1156	SSF141868	EAL domain-like
SHALO_1156	SSF52172	CheY-like
SHALO_1156	SSF55073	Nucleotide cyclase
SHALO_1157	SSF47384	Homodimeric domain of signal transducing histidine kinase
SHALO_1157	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
SHALO_1158	SSF47384	Homodimeric domain of signal transducing histidine kinase
SHALO_1158	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
SHALO_1160	SSF55826	YbaK/ProRS associated domain
SHALO_1164	SSF52833	Thioredoxin-like
SHALO_1165	SSF46689	Homeodomain-like
SHALO_1165	SSF51215	Regulatory protein AraC
SHALO_1166	SSF88723	PIN domain-like
SHALO_1167	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
SHALO_1168	SSF56349	DNA breaking-rejoining enzymes
SHALO_1171	SSF142695	RibA-like
SHALO_1171	SSF55821	YrdC/RibB
SHALO_1172	SSF51735	NAD(P)-binding Rossmann-fold domains
SHALO_1173	SSF158472	HAMP domain-like
SHALO_1173	SSF47384	Homodimeric domain of signal transducing histidine kinase
SHALO_1174	SSF56300	Metallo-dependent phosphatases
SHALO_1175	SSF101874	YceI-like
SHALO_1177	SSF81442	Cytochrome c oxidase subunit I-like
SHALO_1178	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SHALO_1180	SSF53098	Ribonuclease H-like
SHALO_1181	SSF109604	HD-domain/PDEase-like
SHALO_1181	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
SHALO_1184	SSF47413	lambda repressor-like DNA-binding domains
SHALO_1186	SSF52833	Thioredoxin-like
SHALO_1187	SSF56420	Peptide deformylase
SHALO_1188	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
SHALO_1189	SSF53822	Periplasmic binding protein-like I
SHALO_1190	SSF52141	Uracil-DNA glycosylase-like
SHALO_1191	SSF52058	L domain-like
SHALO_1193	SSF51569	Aldolase
SHALO_1194	SSF102114	Radical SAM enzymes
SHALO_1194	SSF53146	Nitrogenase accessory factor-like
SHALO_1195	SSF109604	HD-domain/PDEase-like
SHALO_1195	SSF55781	GAF domain-like
SHALO_1196	SSF52172	CheY-like
SHALO_1197	SSF141868	EAL domain-like
SHALO_1197	SSF52172	CheY-like
SHALO_1197	SSF55073	Nucleotide cyclase
SHALO_1198	SSF47384	Homodimeric domain of signal transducing histidine kinase
SHALO_1198	SSF55785	PYP-like sensor domain (PAS domain)
SHALO_1198	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
SHALO_1199	SSF52172	CheY-like
SHALO_1200	SSF52218	Flavoproteins
SHALO_1200	SSF56281	Metallo-hydrolase/oxidoreductase
SHALO_1201	SSF53146	Nitrogenase accessory factor-like
SHALO_1202	SSF54862	4Fe-4S ferredoxins
SHALO_1203	SSF53807	"Helical backbone" metal receptor
SHALO_1204	SSF53807	"Helical backbone" metal receptor
SHALO_1205	SSF82282	Homocysteine S-methyltransferase
SHALO_1206	SSF53720	ALDH-like
SHALO_1207	SSF50182	Sm-like ribonucleoproteins
SHALO_1207	SSF82689	Mechanosensitive channel protein MscS (YggB), C-terminal domain
SHALO_1207	SSF82861	Mechanosensitive channel protein MscS (YggB), transmembrane region
SHALO_1208	SSF47240	Ferritin-like
SHALO_1209	SSF50341	CheW-like
SHALO_1210	SSF53146	Nitrogenase accessory factor-like
SHALO_1212	SSF52218	Flavoproteins
SHALO_1216	SSF54292	2Fe-2S ferredoxin-like
SHALO_1219	SSF55729	Acyl-CoA N-acyltransferases (Nat)
SHALO_1221	SSF88723	PIN domain-like
SHALO_1224	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
SHALO_1226	SSF51998	PFL-like glycyl radical enzymes
SHALO_1228	SSF56601	beta-lactamase/transpeptidase-like
SHALO_1229	SSF141868	EAL domain-like
SHALO_1229	SSF55073	Nucleotide cyclase
SHALO_1231	SSF103088	OmpA-like
SHALO_1235	SSF55729	Acyl-CoA N-acyltransferases (Nat)
SHALO_1237	SSF143011	RelE-like
SHALO_1239	SSF54506	Diaminopimelate epimerase-like
SHALO_1241	SSF103088	OmpA-like
SHALO_1243	SSF53474	alpha/beta-Hydrolases
SHALO_1244	SSF103481	Multidrug resistance efflux transporter EmrE
SHALO_1245	SSF103481	Multidrug resistance efflux transporter EmrE
SHALO_1247	SSF55073	Nucleotide cyclase
SHALO_1248	SSF55073	Nucleotide cyclase
SHALO_1249	SSF46785	"Winged helix" DNA-binding domain
SHALO_1249	SSF53383	PLP-dependent transferases
SHALO_1250	SSF50475	FMN-binding split barrel
SHALO_1251	SSF50475	FMN-binding split barrel
SHALO_1253	SSF56752	D-aminoacid aminotransferase-like PLP-dependent enzymes
SHALO_1256	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
SHALO_1257	SSF50692	ADC-like
SHALO_1257	SSF53706	Formate dehydrogenase/DMSO reductase, domains 1-3
SHALO_1258	SSF46626	Cytochrome c
SHALO_1259	SSF47384	Homodimeric domain of signal transducing histidine kinase
SHALO_1259	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
SHALO_1260	SSF53850	Periplasmic binding protein-like II
SHALO_1261	SSF52172	CheY-like
SHALO_1262	SSF55298	YjgF-like
SHALO_1263	SSF55729	Acyl-CoA N-acyltransferases (Nat)
SHALO_1265	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SHALO_1267	SSF53807	"Helical backbone" metal receptor
SHALO_1268	SSF53807	"Helical backbone" metal receptor
SHALO_1270	SSF47384	Homodimeric domain of signal transducing histidine kinase
SHALO_1270	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
SHALO_1271	SSF46894	C-terminal effector domain of the bipartite response regulators
SHALO_1271	SSF52172	CheY-like
SHALO_1273	SSF52172	CheY-like
SHALO_1274	SSF51905	FAD/NAD(P)-binding domain
SHALO_1278	SSF52172	CheY-like
SHALO_1279	SSF47384	Homodimeric domain of signal transducing histidine kinase
SHALO_1279	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
SHALO_1280	SSF55729	Acyl-CoA N-acyltransferases (Nat)
SHALO_1280	SSF56317	Carbon-nitrogen hydrolase
SHALO_1281	SSF53098	Ribonuclease H-like
SHALO_1285	SSF48452	TPR-like
SHALO_1287	SSF46894	C-terminal effector domain of the bipartite response regulators
SHALO_1287	SSF52172	CheY-like
SHALO_1288	SSF47384	Homodimeric domain of signal transducing histidine kinase
SHALO_1288	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
SHALO_1290	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
SHALO_1291	SSF46548	alpha-helical ferredoxin
SHALO_1291	SSF51971	Nucleotide-binding domain
SHALO_1293	SSF54862	4Fe-4S ferredoxins
SHALO_1294	SSF56762	HydB/Nqo4-like
SHALO_1295	SSF143243	Nqo5-like
SHALO_1296	SSF54862	4Fe-4S ferredoxins
SHALO_1297	SSF56770	HydA/Nqo6-like
SHALO_1298	SSF109604	HD-domain/PDEase-like
SHALO_1300	SSF103473	MFS general substrate transporter
SHALO_1303	SSF100950	NagB/RpiA/CoA transferase-like
SHALO_1304	SSF100950	NagB/RpiA/CoA transferase-like
SHALO_1304	SSF46548	alpha-helical ferredoxin
SHALO_1305	SSF54534	FKBP-like
SHALO_1306	SSF53383	PLP-dependent transferases
SHALO_1307	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SHALO_1307	SSF90002	Hypothetical protein YjiA, C-terminal domain
SHALO_1310	SSF51430	NAD(P)-linked oxidoreductase
SHALO_1311	SSF46977	Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain
SHALO_1311	SSF51905	FAD/NAD(P)-binding domain
SHALO_1311	SSF56425	Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
SHALO_1312	SSF159203	NifT/FixU-like
SHALO_1313	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SHALO_1313	SSF55781	GAF domain-like
SHALO_1315	SSF49367	Superoxide reductase-like
SHALO_1318	SSF55326	PurM N-terminal domain-like
SHALO_1318	SSF56042	PurM C-terminal domain-like
SHALO_1319	SSF55120	Pseudouridine synthase
SHALO_1321	SSF141868	EAL domain-like
SHALO_1321	SSF55073	Nucleotide cyclase
SHALO_1321	SSF55785	PYP-like sensor domain (PAS domain)
SHALO_1322	SSF47413	lambda repressor-like DNA-binding domains
SHALO_1323	SSF55073	Nucleotide cyclase
SHALO_1325	SSF53613	Ribokinase-like
SHALO_1327	SSF53613	Ribokinase-like
SHALO_1328	SSF47240	Ferritin-like
SHALO_1330	SSF47413	lambda repressor-like DNA-binding domains
SHALO_1331	SSF109604	HD-domain/PDEase-like
SHALO_1331	SSF55073	Nucleotide cyclase
SHALO_1332	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
SHALO_1333	SSF56281	Metallo-hydrolase/oxidoreductase
SHALO_1335	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SHALO_1336	SSF103088	OmpA-like
SHALO_1338	SSF46689	Homeodomain-like
SHALO_1339	SSF111369	HlyD-like secretion proteins
SHALO_1340	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
SHALO_1340	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
SHALO_1340	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
SHALO_1341	SSF56954	Outer membrane efflux proteins (OEP)
SHALO_1343	SSF102114	Radical SAM enzymes
SHALO_1343	SSF47781	RuvA domain 2-like
SHALO_1344	SSF55469	FMN-dependent nitroreductase-like
SHALO_1345	SSF55469	FMN-dependent nitroreductase-like
SHALO_1349	SSF48173	Cryptochrome/photolyase FAD-binding domain
SHALO_1349	SSF52425	Cryptochrome/photolyase, N-terminal domain
SHALO_1352	SSF56801	Acetyl-CoA synthetase-like
SHALO_1353	SSF55021	ACT-like
SHALO_1354	SSF56801	Acetyl-CoA synthetase-like
SHALO_1355	SSF53323	Pyruvate-ferredoxin oxidoreductase, PFOR, domain III
SHALO_1356	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
SHALO_1356	SSF52922	TK C-terminal domain-like
SHALO_1356	SSF54862	4Fe-4S ferredoxins
SHALO_1360	SSF101116	Flagellar export chaperone FliS
SHALO_1362	SSF160214	FlaG-like
SHALO_1364	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
SHALO_1367	SSF101498	Anti-sigma factor FlgM
SHALO_1369	SSF64518	Phase 1 flagellin
SHALO_1370	SSF161098	MetI-like
SHALO_1372	SSF52091	SpoIIaa-like
SHALO_1373	SSF55331	Tautomerase/MIF
SHALO_1374	SSF81336	F1F0 ATP synthase subunit A
SHALO_1376	SSF51391	Thiamin phosphate synthase
SHALO_1377	SSF55931	Glutamine synthetase/guanido kinase
SHALO_1377	SSF89095	GatB/YqeY motif
SHALO_1378	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
SHALO_1378	SSF51735	NAD(P)-binding Rossmann-fold domains
SHALO_1379	SSF51445	(Trans)glycosidases
SHALO_1380	SSF51338	Composite domain of metallo-dependent hydrolases
SHALO_1380	SSF51556	Metallo-dependent hydrolases
SHALO_1381	SSF55120	Pseudouridine synthase
SHALO_1385	SSF102645	CoaB-like
SHALO_1385	SSF52507	Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
SHALO_1386	SSF51161	Trimeric LpxA-like enzymes
SHALO_1386	SSF53448	Nucleotide-diphospho-sugar transferases
SHALO_1388	SSF74650	Galactose mutarotase-like
SHALO_1389	SSF46785	"Winged helix" DNA-binding domain
SHALO_1390	SSF52218	Flavoproteins
SHALO_1392	SSF89957	MTH1187/YkoF-like
SHALO_1394	SSF102114	Radical SAM enzymes
SHALO_1395	SSF53697	SIS domain
SHALO_1396	SSF158682	TerB-like
SHALO_1397	SSF46689	Homeodomain-like
SHALO_1398	SSF56770	HydA/Nqo6-like
SHALO_1399	SSF56762	HydB/Nqo4-like
SHALO_1400	SSF56770	HydA/Nqo6-like
SHALO_1401	SSF56762	HydB/Nqo4-like
SHALO_1402	SSF81342	Transmembrane di-heme cytochromes
SHALO_1403	SSF53163	HybD-like
SHALO_1405	SSF54975	Acylphosphatase/BLUF domain-like
SHALO_1405	SSF55821	YrdC/RibB
SHALO_1406	SSF47598	Ribbon-helix-helix
SHALO_1406	SSF55021	ACT-like
SHALO_1407	SSF56935	Porins
SHALO_1410	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SHALO_1411	SSF159127	HupF/HypC-like
SHALO_1413	SSF55326	PurM N-terminal domain-like
SHALO_1413	SSF56042	PurM C-terminal domain-like
SHALO_1415	SSF55729	Acyl-CoA N-acyltransferases (Nat)
SHALO_1416	SSF56784	HAD-like
SHALO_1419	SSF53659	Isocitrate/Isopropylmalate dehydrogenase-like
SHALO_1420	SSF51735	NAD(P)-binding Rossmann-fold domains
SHALO_1420	SSF56327	LDH C-terminal domain-like
SHALO_1421	SSF52210	Succinyl-CoA synthetase domains
SHALO_1421	SSF56059	Glutathione synthetase ATP-binding domain-like
SHALO_1422	SSF51735	NAD(P)-binding Rossmann-fold domains
SHALO_1422	SSF52210	Succinyl-CoA synthetase domains
SHALO_1423	SSF54862	4Fe-4S ferredoxins
SHALO_1424	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
SHALO_1424	SSF52922	TK C-terminal domain-like
SHALO_1425	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
SHALO_1426	SSF53323	Pyruvate-ferredoxin oxidoreductase, PFOR, domain III
SHALO_1429	SSF47240	Ferritin-like
SHALO_1430	SSF48557	L-aspartase-like
SHALO_1431	SSF52833	Thioredoxin-like
SHALO_1432	SSF48403	Ankyrin repeat
SHALO_1436	SSF51419	PLP-binding barrel
SHALO_1437	SSF50156	PDZ domain-like
SHALO_1439	SSF51735	NAD(P)-binding Rossmann-fold domains
SHALO_1440	SSF51569	Aldolase
SHALO_1441	SSF63411	LuxS/MPP-like metallohydrolase
SHALO_1442	SSF51395	FMN-linked oxidoreductases
SHALO_1443	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SHALO_1443	SSF90123	ABC transporter transmembrane region
SHALO_1444	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
SHALO_1444	SSF52374	Nucleotidylyl transferase
SHALO_1447	SSF46929	DNA helicase RuvA subunit, C-terminal domain
SHALO_1447	SSF47781	RuvA domain 2-like
SHALO_1447	SSF50249	Nucleic acid-binding proteins
SHALO_1448	SSF52440	PreATP-grasp domain
SHALO_1448	SSF56059	Glutathione synthetase ATP-binding domain-like
SHALO_1449	SSF143120	YefM-like
SHALO_1450	SSF53474	alpha/beta-Hydrolases
SHALO_1451	SSF54975	Acylphosphatase/BLUF domain-like
SHALO_1452	SSF53244	MurD-like peptide ligases, peptide-binding domain
SHALO_1452	SSF53623	MurD-like peptide ligases, catalytic domain
SHALO_1453	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SHALO_1453	SSF53659	Isocitrate/Isopropylmalate dehydrogenase-like
SHALO_1453	SSF75138	HprK N-terminal domain-like
SHALO_1454	SSF53067	Actin-like ATPase domain
SHALO_1455	SSF89095	GatB/YqeY motif
SHALO_1459	SSF160246	EspE N-terminal domain-like
SHALO_1459	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SHALO_1460	SSF48452	TPR-like
SHALO_1461	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SHALO_1466	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SHALO_1466	SSF54814	Prokaryotic type KH domain (KH-domain type II)
SHALO_1467	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SHALO_1468	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
SHALO_1469	SSF55653	Ribosomal protein L9 C-domain
SHALO_1469	SSF55658	L9 N-domain-like
SHALO_1470	SSF52821	Rhodanese/Cell cycle control phosphatase
SHALO_1471	SSF52402	Adenine nucleotide alpha hydrolases-like
SHALO_1471	SSF69864	Argininosuccinate synthetase, C-terminal domain
SHALO_1472	SSF55174	Alpha-L RNA-binding motif
SHALO_1473	SSF47648	Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain
SHALO_1473	SSF52418	Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain
SHALO_1474	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SHALO_1475	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SHALO_1477	SSF46565	Chaperone J-domain
SHALO_1478	SSF55729	Acyl-CoA N-acyltransferases (Nat)
SHALO_1484	SSF109604	HD-domain/PDEase-like
SHALO_1486	SSF47384	Homodimeric domain of signal transducing histidine kinase
SHALO_1486	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
SHALO_1487	SSF52172	CheY-like
SHALO_1488	SSF48695	Multiheme cytochromes
SHALO_1489	SSF48695	Multiheme cytochromes
SHALO_1490	SSF51905	FAD/NAD(P)-binding domain
SHALO_1490	SSF56425	Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
SHALO_1491	SSF142695	RibA-like
SHALO_1492	SSF142695	RibA-like
SHALO_1492	SSF55821	YrdC/RibB
SHALO_1493	SSF52121	Lumazine synthase
SHALO_1494	SSF69118	AhpD-like
SHALO_1495	SSF54862	4Fe-4S ferredoxins
SHALO_1497	SSF82649	SufE/NifU
SHALO_1498	SSF47384	Homodimeric domain of signal transducing histidine kinase
SHALO_1498	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
SHALO_1499	SSF52172	CheY-like
SHALO_1500	SSF54862	4Fe-4S ferredoxins
SHALO_1502	SSF47384	Homodimeric domain of signal transducing histidine kinase
SHALO_1502	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
SHALO_1503	SSF52172	CheY-like
SHALO_1505	SSF54862	4Fe-4S ferredoxins
SHALO_1506	SSF54862	4Fe-4S ferredoxins
SHALO_1508	SSF53383	PLP-dependent transferases
SHALO_1509	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SHALO_1510	SSF52317	Class I glutamine amidotransferase-like
SHALO_1510	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SHALO_1511	SSF52733	Nicotinate mononucleotide:5,6-dimethylbenzimidazole phosphoribosyltransferase (CobT)
SHALO_1514	SSF53254	Phosphoglycerate mutase-like
SHALO_1515	SSF53800	Chelatase
SHALO_1516	SSF81345	ABC transporter involved in vitamin B12 uptake, BtuC
SHALO_1517	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SHALO_1518	SSF53807	"Helical backbone" metal receptor
SHALO_1519	SSF63965	Precorrin-8X methylmutase CbiC/CobH
SHALO_1520	SSF111342	CbiD-like
SHALO_1521	SSF53790	Tetrapyrrole methylase
SHALO_1522	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
SHALO_1523	SSF53790	Tetrapyrrole methylase
SHALO_1524	SSF53790	Tetrapyrrole methylase
SHALO_1525	SSF159664	CobE/GbiG C-terminal domain-like
SHALO_1525	SSF159672	CbiG N-terminal domain-like
SHALO_1526	SSF53790	Tetrapyrrole methylase
SHALO_1527	SSF53790	Tetrapyrrole methylase
SHALO_1527	SSF69618	HemD-like
SHALO_1529	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SHALO_1529	SSF90123	ABC transporter transmembrane region
SHALO_1530	SSF52317	Class I glutamine amidotransferase-like
SHALO_1530	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SHALO_1532	SSF51735	NAD(P)-binding Rossmann-fold domains
SHALO_1532	SSF75615	Siroheme synthase middle domains-like
SHALO_1533	SSF46689	Homeodomain-like
SHALO_1533	SSF48498	Tetracyclin repressor-like, C-terminal domain
SHALO_1534	SSF52218	Flavoproteins
SHALO_1535	SSF50022	ISP domain
SHALO_1536	SSF50475	FMN-binding split barrel
SHALO_1545	SSF47413	lambda repressor-like DNA-binding domains
SHALO_1554	SSF56349	DNA breaking-rejoining enzymes
SHALO_1556	SSF47729	IHF-like DNA-binding proteins
SHALO_1557	SSF64518	Phase 1 flagellin
SHALO_1558	SSF46785	"Winged helix" DNA-binding domain
SHALO_1558	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SHALO_1559	SSF52016	LeuD/IlvD-like
SHALO_1559	SSF53732	Aconitase iron-sulfur domain
SHALO_1559	SSF74778	Aconitase B, N-terminal domain
SHALO_1560	SSF54534	FKBP-like
SHALO_1561	SSF51621	Phosphoenolpyruvate/pyruvate domain
SHALO_1561	SSF52009	Phosphohistidine domain
SHALO_1561	SSF56059	Glutathione synthetase ATP-binding domain-like
SHALO_1562	SSF103473	MFS general substrate transporter
SHALO_1564	SSF102114	Radical SAM enzymes
SHALO_1566	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
SHALO_1567	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
SHALO_1568	SSF51735	NAD(P)-binding Rossmann-fold domains
SHALO_1569	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
SHALO_1571	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SHALO_1572	SSF161098	MetI-like
SHALO_1573	SSF161098	MetI-like
SHALO_1574	SSF53850	Periplasmic binding protein-like II
SHALO_1575	SSF51569	Aldolase
SHALO_1576	SSF46565	Chaperone J-domain
SHALO_1578	SSF49367	Superoxide reductase-like
SHALO_1579	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SHALO_1580	SSF53720	ALDH-like
SHALO_1581	SSF51905	FAD/NAD(P)-binding domain
SHALO_1583	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
SHALO_1585	SSF48452	TPR-like
SHALO_1586	SSF51366	Ribulose-phoshate binding barrel
SHALO_1587	SSF54197	HIT-like
SHALO_1588	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SHALO_1588	SSF52821	Rhodanese/Cell cycle control phosphatase
SHALO_1593	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SHALO_1594	SSF53659	Isocitrate/Isopropylmalate dehydrogenase-like
SHALO_1595	SSF63892	Pyridoxine 5'-phosphate synthase
SHALO_1596	SSF81342	Transmembrane di-heme cytochromes
SHALO_1597	SSF46626	Cytochrome c
SHALO_1598	SSF51905	FAD/NAD(P)-binding domain
SHALO_1600	SSF53067	Actin-like ATPase domain
SHALO_1601	SSF52467	DHS-like NAD/FAD-binding domain
SHALO_1601	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
SHALO_1602	SSF55021	ACT-like
SHALO_1603	SSF51161	Trimeric LpxA-like enzymes
SHALO_1605	SSF46548	alpha-helical ferredoxin
SHALO_1605	SSF51971	Nucleotide-binding domain
SHALO_1606	SSF53383	PLP-dependent transferases
SHALO_1607	SSF53807	"Helical backbone" metal receptor
SHALO_1608	SSF46689	Homeodomain-like
SHALO_1608	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SHALO_1608	SSF55781	GAF domain-like
SHALO_1609	SSF50475	FMN-binding split barrel
SHALO_1610	SSF53807	"Helical backbone" metal receptor
SHALO_1612	SSF53807	"Helical backbone" metal receptor
SHALO_1613	SSF51161	Trimeric LpxA-like enzymes
SHALO_1614	SSF50621	Alanine racemase C-terminal domain-like
SHALO_1614	SSF51419	PLP-binding barrel
SHALO_1615	SSF52954	Class II aaRS ABD-related
SHALO_1615	SSF55681	Class II aaRS and biotin synthetases
SHALO_1616	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SHALO_1617	SSF52374	Nucleotidylyl transferase
SHALO_1618	SSF52507	Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
SHALO_1621	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
SHALO_1622	SSF53218	Molybdenum cofactor biosynthesis proteins
SHALO_1622	SSF63867	MoeA C-terminal domain-like
SHALO_1622	SSF63882	MoeA N-terminal region -like
SHALO_1623	SSF55205	EPT/RTPC-like
SHALO_1630	SSF52255	N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE)
SHALO_1631	SSF52402	Adenine nucleotide alpha hydrolases-like
SHALO_1634	SSF117457	FumA C-terminal domain-like
SHALO_1637	SSF47384	Homodimeric domain of signal transducing histidine kinase
SHALO_1637	SSF55785	PYP-like sensor domain (PAS domain)
SHALO_1637	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
SHALO_1638	SSF46894	C-terminal effector domain of the bipartite response regulators
SHALO_1638	SSF52172	CheY-like
SHALO_1639	SSF103473	MFS general substrate transporter
SHALO_1641	SSF53254	Phosphoglycerate mutase-like
SHALO_1642	SSF143865	CorA soluble domain-like
SHALO_1642	SSF144083	Magnesium transport protein CorA, transmembrane region
SHALO_1643	SSF56349	DNA breaking-rejoining enzymes
SHALO_1644	SSF51713	tRNA-guanine transglycosylase
SHALO_1645	SSF116726	TrkA C-terminal domain-like
SHALO_1646	SSF56796	Dehydroquinate synthase-like
SHALO_1647	SSF50182	Sm-like ribonucleoproteins
SHALO_1648	SSF102114	Radical SAM enzymes
SHALO_1649	SSF140990	FtsH protease domain-like
SHALO_1649	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SHALO_1650	SSF53474	alpha/beta-Hydrolases
SHALO_1651	SSF52833	Thioredoxin-like
SHALO_1653	SSF51679	Bacterial luciferase-like
SHALO_1654	SSF52980	Restriction endonuclease-like
SHALO_1655	SSF51735	NAD(P)-binding Rossmann-fold domains
SHALO_1656	SSF54427	NTF2-like
SHALO_1657	SSF46785	"Winged helix" DNA-binding domain
SHALO_1658	SSF55120	Pseudouridine synthase
SHALO_1660	SSF52467	DHS-like NAD/FAD-binding domain
SHALO_1660	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
SHALO_1661	SSF52833	Thioredoxin-like
SHALO_1663	SSF56601	beta-lactamase/transpeptidase-like
SHALO_1664	SSF141868	EAL domain-like
SHALO_1664	SSF55073	Nucleotide cyclase
SHALO_1665	SSF46689	Homeodomain-like
SHALO_1667	SSF46689	Homeodomain-like
SHALO_1667	SSF48498	Tetracyclin repressor-like, C-terminal domain
SHALO_1668	SSF56954	Outer membrane efflux proteins (OEP)
SHALO_1669	SSF111369	HlyD-like secretion proteins
SHALO_1670	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
SHALO_1670	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
SHALO_1670	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
SHALO_1672	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
SHALO_1673	SSF47240	Ferritin-like
SHALO_1673	SSF57802	Rubredoxin-like
SHALO_1675	SSF143968	UbiD C-terminal domain-like
SHALO_1675	SSF50475	FMN-binding split barrel
SHALO_1676	SSF53850	Periplasmic binding protein-like II
SHALO_1676	SSF54782	Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain
SHALO_1677	SSF52833	Thioredoxin-like
SHALO_1679	SSF52954	Class II aaRS ABD-related
SHALO_1679	SSF55681	Class II aaRS and biotin synthetases
SHALO_1679	SSF55826	YbaK/ProRS associated domain
SHALO_1680	SSF51735	NAD(P)-binding Rossmann-fold domains
SHALO_1680	SSF69075	Glutamyl tRNA-reductase dimerization domain
SHALO_1680	SSF69742	Glutamyl tRNA-reductase catalytic, N-terminal domain
SHALO_1681	SSF48576	Terpenoid synthases
SHALO_1683	SSF158752	HP0242-like
SHALO_1684	SSF53383	PLP-dependent transferases
SHALO_1685	SSF46785	"Winged helix" DNA-binding domain
SHALO_1686	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
SHALO_1687	SSF55073	Nucleotide cyclase
SHALO_1688	SSF46589	tRNA-binding arm
SHALO_1688	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
SHALO_1688	SSF50677	ValRS/IleRS/LeuRS editing domain
SHALO_1688	SSF52374	Nucleotidylyl transferase
SHALO_1689	SSF53850	Periplasmic binding protein-like II
SHALO_1690	SSF53218	Molybdenum cofactor biosynthesis proteins
SHALO_1691	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
SHALO_1691	SSF51735	NAD(P)-binding Rossmann-fold domains
SHALO_1692	SSF53720	ALDH-like
SHALO_1693	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
SHALO_1694	SSF51569	Aldolase
SHALO_1695	SSF109998	Triger factor/SurA peptide-binding domain-like
SHALO_1695	SSF54534	FKBP-like
SHALO_1696	SSF48150	DNA-glycosylase
SHALO_1697	SSF52833	Thioredoxin-like
SHALO_1698	SSF53187	Zn-dependent exopeptidases
SHALO_1700	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
SHALO_1701	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
SHALO_1702	SSF56281	Metallo-hydrolase/oxidoreductase
SHALO_1703	SSF52402	Adenine nucleotide alpha hydrolases-like
SHALO_1704	SSF53383	PLP-dependent transferases
SHALO_1706	SSF53633	Carbamate kinase-like
SHALO_1707	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
SHALO_1708	SSF53448	Nucleotide-diphospho-sugar transferases
SHALO_1711	SSF52833	Thioredoxin-like
SHALO_1711	SSF74863	Thiol:disulfide interchange protein DsbD, N-terminal domain (DsbD-alpha)
SHALO_1712	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SHALO_1713	SSF100920	Heat shock protein 70kD (HSP70), peptide-binding domain
SHALO_1713	SSF100934	Heat shock protein 70kD (HSP70), C-terminal subdomain
SHALO_1713	SSF53067	Actin-like ATPase domain
SHALO_1714	SSF51064	Head domain of nucleotide exchange factor GrpE
SHALO_1714	SSF58014	Coiled-coil domain of nucleotide exchange factor GrpE
SHALO_1715	SSF46785	"Winged helix" DNA-binding domain
SHALO_1717	SSF47413	lambda repressor-like DNA-binding domains
SHALO_1718	SSF47060	S15/NS1 RNA-binding domain
SHALO_1719	SSF46785	"Winged helix" DNA-binding domain
SHALO_1721	SSF64182	DHH phosphoesterases
SHALO_1723	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
SHALO_1724	SSF55073	Nucleotide cyclase
SHALO_1725	SSF52374	Nucleotidylyl transferase
SHALO_1725	SSF82114	Riboflavin kinase-like
SHALO_1726	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
SHALO_1726	SSF55174	Alpha-L RNA-binding motif
SHALO_1727	SSF47781	RuvA domain 2-like
SHALO_1727	SSF50249	Nucleic acid-binding proteins
SHALO_1727	SSF52113	BRCT domain
SHALO_1727	SSF56091	DNA ligase/mRNA capping enzyme, catalytic domain
SHALO_1730	SSF51717	Dihydropteroate synthetase-like
SHALO_1731	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SHALO_1733	SSF53633	Carbamate kinase-like
SHALO_1733	SSF55021	ACT-like
SHALO_1734	SSF55811	Nudix
SHALO_1735	SSF102114	Radical SAM enzymes
SHALO_1736	SSF51735	NAD(P)-binding Rossmann-fold domains
SHALO_1737	SSF46955	Putative DNA-binding domain
SHALO_1738	SSF46565	Chaperone J-domain
SHALO_1738	SSF49493	HSP40/DnaJ peptide-binding domain
SHALO_1739	SSF50156	PDZ domain-like
SHALO_1739	SSF50494	Trypsin-like serine proteases
SHALO_1740	SSF46894	C-terminal effector domain of the bipartite response regulators
SHALO_1740	SSF52172	CheY-like
SHALO_1741	SSF158472	HAMP domain-like
SHALO_1741	SSF47384	Homodimeric domain of signal transducing histidine kinase
SHALO_1741	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
SHALO_1744	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SHALO_1744	SSF81767	Pre-protein crosslinking domain of SecA
SHALO_1744	SSF81886	Helical scaffold and wing domains of SecA
SHALO_1745	SSF89392	Prokaryotic lipoproteins and lipoprotein localization factors
SHALO_1746	SSF141868	EAL domain-like
SHALO_1746	SSF55073	Nucleotide cyclase
SHALO_1746	SSF55781	GAF domain-like
SHALO_1748	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SHALO_1752	SSF56801	Acetyl-CoA synthetase-like
SHALO_1754	SSF51703	Cobalamin (vitamin B12)-dependent enzymes
SHALO_1755	SSF52242	Cobalamin (vitamin B12)-binding domain
SHALO_1756	SSF48695	Multiheme cytochromes
SHALO_1757	SSF89562	RraA-like
SHALO_1760	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SHALO_1760	SSF81923	Double Clp-N motif
SHALO_1761	SSF50156	PDZ domain-like
SHALO_1761	SSF52096	ClpP/crotonase
SHALO_1762	SSF56104	SAICAR synthase-like
SHALO_1763	SSF82697	PurS-like
SHALO_1764	SSF52317	Class I glutamine amidotransferase-like
SHALO_1766	SSF69593	Glycerol-3-phosphate (1)-acyltransferase
SHALO_1767	SSF110942	HSP90 C-terminal domain
SHALO_1767	SSF54211	Ribosomal protein S5 domain 2-like
SHALO_1767	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
SHALO_1769	SSF48208	Six-hairpin glycosidases
SHALO_1769	SSF52833	Thioredoxin-like
SHALO_1770	SSF52821	Rhodanese/Cell cycle control phosphatase
SHALO_1771	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SHALO_1773	SSF48452	TPR-like
SHALO_1774	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SHALO_1775	SSF53146	Nitrogenase accessory factor-like
SHALO_1778	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SHALO_1779	SSF54001	Cysteine proteinases
SHALO_1779	SSF55166	Hedgehog/DD-peptidase
SHALO_1780	SSF52499	Isochorismatase-like hydrolases
SHALO_1782	SSF52833	Thioredoxin-like
SHALO_1784	SSF55008	HMA, heavy metal-associated domain
SHALO_1785	SSF55008	HMA, heavy metal-associated domain
SHALO_1785	SSF56784	HAD-like
SHALO_1785	SSF81653	Calcium ATPase, transduction domain A
SHALO_1785	SSF81665	Calcium ATPase, transmembrane domain M
SHALO_1786	SSF103190	Sensory domain-like
SHALO_1786	SSF109604	HD-domain/PDEase-like
SHALO_1789	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
SHALO_1789	SSF81799	Putative methyltransferase TM0872, insert domain
SHALO_1790	SSF53383	PLP-dependent transferases
SHALO_1791	SSF109998	Triger factor/SurA peptide-binding domain-like
SHALO_1792	SSF53067	Actin-like ATPase domain
SHALO_1793	SSF52490	Tubulin nucleotide-binding domain-like
SHALO_1793	SSF55307	Tubulin C-terminal domain-like
SHALO_1795	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
SHALO_1797	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
SHALO_1798	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SHALO_1799	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
SHALO_1801	SSF117916	Fe-S cluster assembly (FSCA) domain-like
SHALO_1802	SSF81442	Cytochrome c oxidase subunit I-like
SHALO_1805	SSF52335	Methylglyoxal synthase-like
SHALO_1805	SSF53927	Cytidine deaminase-like
SHALO_1806	SSF158442	DsbB-like
SHALO_1807	SSF52833	Thioredoxin-like
SHALO_1808	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
SHALO_1809	SSF46565	Chaperone J-domain
SHALO_1810	SSF53383	PLP-dependent transferases
SHALO_1811	SSF56300	Metallo-dependent phosphatases
SHALO_1812	SSF54001	Cysteine proteinases
SHALO_1815	SSF55326	PurM N-terminal domain-like
SHALO_1815	SSF56042	PurM C-terminal domain-like
SHALO_1816	SSF141868	EAL domain-like
SHALO_1816	SSF55073	Nucleotide cyclase
SHALO_1816	SSF55785	PYP-like sensor domain (PAS domain)
SHALO_1819	SSF111337	QueA-like
SHALO_1821	SSF51126	Pectin lyase-like
SHALO_1833	SSF53850	Periplasmic binding protein-like II
SHALO_1834	SSF109604	HD-domain/PDEase-like
SHALO_1834	SSF52172	CheY-like
SHALO_1835	SSF47226	Histidine-containing phosphotransfer domain, HPT domain
SHALO_1835	SSF47384	Homodimeric domain of signal transducing histidine kinase
SHALO_1835	SSF52172	CheY-like
SHALO_1835	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
SHALO_1836	SSF56281	Metallo-hydrolase/oxidoreductase
SHALO_1837	SSF56801	Acetyl-CoA synthetase-like
SHALO_1839	SSF56935	Porins
SHALO_1840	SSF47384	Homodimeric domain of signal transducing histidine kinase
SHALO_1840	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
SHALO_1841	SSF46894	C-terminal effector domain of the bipartite response regulators
SHALO_1841	SSF52172	CheY-like
SHALO_1843	SSF51735	NAD(P)-binding Rossmann-fold domains
SHALO_1844	SSF51316	Mss4-like
SHALO_1845	SSF54631	CBS-domain pair
SHALO_1846	SSF53254	Phosphoglycerate mutase-like
SHALO_1847	SSF109604	HD-domain/PDEase-like
SHALO_1847	SSF53448	Nucleotide-diphospho-sugar transferases
SHALO_1849	SSF56801	Acetyl-CoA synthetase-like
SHALO_1850	SSF102114	Radical SAM enzymes
SHALO_1852	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
SHALO_1854	SSF46548	alpha-helical ferredoxin
SHALO_1854	SSF51971	Nucleotide-binding domain
SHALO_1855	SSF47741	CO dehydrogenase ISP C-domain like
SHALO_1855	SSF54292	2Fe-2S ferredoxin-like
SHALO_1855	SSF54665	CO dehydrogenase molybdoprotein N-domain-like
SHALO_1855	SSF56003	Molybdenum cofactor-binding domain
SHALO_1856	SSF47384	Homodimeric domain of signal transducing histidine kinase
SHALO_1856	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
SHALO_1857	SSF52172	CheY-like
SHALO_1858	SSF47175	Cytochromes
SHALO_1859	SSF81342	Transmembrane di-heme cytochromes
SHALO_1861	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
SHALO_1862	SSF46894	C-terminal effector domain of the bipartite response regulators
SHALO_1862	SSF52172	CheY-like
SHALO_1864	SSF161111	Cation efflux protein transmembrane domain-like
SHALO_1868	SSF56935	Porins
SHALO_1869	SSF46689	Homeodomain-like
SHALO_1870	SSF50182	Sm-like ribonucleoproteins
SHALO_1870	SSF82689	Mechanosensitive channel protein MscS (YggB), C-terminal domain
SHALO_1870	SSF82861	Mechanosensitive channel protein MscS (YggB), transmembrane region
SHALO_1871	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
SHALO_1871	SSF56784	HAD-like
SHALO_1872	SSF81301	Nucleotidyltransferase
SHALO_1874	SSF53927	Cytidine deaminase-like
SHALO_1877	SSF52467	DHS-like NAD/FAD-binding domain
SHALO_1878	SSF53474	alpha/beta-Hydrolases
SHALO_1879	SSF47644	Methionine synthase domain
SHALO_1879	SSF51717	Dihydropteroate synthetase-like
SHALO_1879	SSF52242	Cobalamin (vitamin B12)-binding domain
SHALO_1879	SSF56507	Methionine synthase activation domain-like
SHALO_1879	SSF82282	Homocysteine S-methyltransferase
SHALO_1880	SSF53822	Periplasmic binding protein-like I
SHALO_1881	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
SHALO_1883	SSF103481	Multidrug resistance efflux transporter EmrE
SHALO_1884	SSF53649	Alkaline phosphatase-like
SHALO_1885	SSF111352	Ammonium transporter
SHALO_1886	SSF54913	GlnB-like
SHALO_1888	SSF50692	ADC-like
SHALO_1888	SSF53706	Formate dehydrogenase/DMSO reductase, domains 1-3
SHALO_1889	SSF109604	HD-domain/PDEase-like
SHALO_1889	SSF55073	Nucleotide cyclase
SHALO_1892	SSF56219	DNase I-like
SHALO_1893	SSF53056	beta-carbonic anhydrase, cab
SHALO_1894	SSF51182	RmlC-like cupins
SHALO_1895	SSF141868	EAL domain-like
SHALO_1895	SSF55073	Nucleotide cyclase
SHALO_1895	SSF55785	PYP-like sensor domain (PAS domain)
SHALO_1896	SSF160996	HI0933 insert domain-like
SHALO_1896	SSF51905	FAD/NAD(P)-binding domain
SHALO_1898	SSF75217	alpha/beta knot
SHALO_1899	SSF53328	Formyltransferase
SHALO_1899	SSF55021	ACT-like
SHALO_1900	SSF81301	Nucleotidyltransferase
SHALO_1900	SSF81891	Poly A polymerase C-terminal region-like
SHALO_1902	SSF48452	TPR-like
SHALO_1903	SSF53659	Isocitrate/Isopropylmalate dehydrogenase-like
SHALO_1904	SSF52016	LeuD/IlvD-like
SHALO_1905	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SHALO_1907	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
SHALO_1907	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
SHALO_1907	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
SHALO_1909	SSF46785	"Winged helix" DNA-binding domain
SHALO_1910	SSF56219	DNase I-like
SHALO_1911	SSF55785	PYP-like sensor domain (PAS domain)
SHALO_1912	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
SHALO_1913	SSF55811	Nudix
SHALO_1914	SSF56524	Oxidoreductase molybdopterin-binding domain
SHALO_1917	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
SHALO_1918	SSF46689	Homeodomain-like
SHALO_1919	SSF52218	Flavoproteins
SHALO_1921	SSF53850	Periplasmic binding protein-like II
SHALO_1922	SSF103190	Sensory domain-like
SHALO_1922	SSF55073	Nucleotide cyclase
SHALO_1923	SSF53850	Periplasmic binding protein-like II
SHALO_1925	SSF46785	"Winged helix" DNA-binding domain
SHALO_1925	SSF47819	HRDC-like
SHALO_1925	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SHALO_1926	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
SHALO_1928	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SHALO_1929	SSF53850	Periplasmic binding protein-like II
SHALO_1930	SSF103190	Sensory domain-like
SHALO_1930	SSF55073	Nucleotide cyclase
SHALO_1930	SSF55785	PYP-like sensor domain (PAS domain)
SHALO_1931	SSF158472	HAMP domain-like
SHALO_1931	SSF47384	Homodimeric domain of signal transducing histidine kinase
SHALO_1931	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
SHALO_1932	SSF46894	C-terminal effector domain of the bipartite response regulators
SHALO_1932	SSF52172	CheY-like
SHALO_1934	SSF48695	Multiheme cytochromes
SHALO_1934	SSF81342	Transmembrane di-heme cytochromes
SHALO_1935	SSF48695	Multiheme cytochromes
SHALO_1936	SSF46626	Cytochrome c
SHALO_1938	SSF56801	Acetyl-CoA synthetase-like
SHALO_1939	SSF51621	Phosphoenolpyruvate/pyruvate domain
SHALO_1940	SSF48256	Citrate synthase
SHALO_1941	SSF103378	2-methylcitrate dehydratase PrpD
SHALO_1943	SSF57783	Zinc beta-ribbon
SHALO_1943	SSF82057	Prokaryotic SH3-related domain
SHALO_1947	SSF117143	Flagellar hook protein flgE
SHALO_1948	SSF117143	Flagellar hook protein flgE
SHALO_1949	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
SHALO_1949	SSF88946	Sigma2 domain of RNA polymerase sigma factors
SHALO_1951	SSF46785	"Winged helix" DNA-binding domain
SHALO_1952	SSF54909	Dimeric alpha+beta barrel
SHALO_1953	SSF52218	Flavoproteins
SHALO_1955	SSF56801	Acetyl-CoA synthetase-like
SHALO_1958	SSF46894	C-terminal effector domain of the bipartite response regulators
SHALO_1958	SSF52172	CheY-like
SHALO_1959	SSF47384	Homodimeric domain of signal transducing histidine kinase
SHALO_1959	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
SHALO_1960	SSF55909	Pentein
SHALO_1961	SSF160240	Cation efflux protein cytoplasmic domain-like
SHALO_1961	SSF161111	Cation efflux protein transmembrane domain-like
SHALO_1962	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SHALO_1963	SSF50037	C-terminal domain of transcriptional repressors
SHALO_1964	SSF56317	Carbon-nitrogen hydrolase
SHALO_1965	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SHALO_1968	SSF50331	MOP-like
SHALO_1969	SSF55811	Nudix
SHALO_1970	SSF143865	CorA soluble domain-like
SHALO_1970	SSF144083	Magnesium transport protein CorA, transmembrane region
SHALO_1971	SSF51261	Duplicated hybrid motif
SHALO_1973	SSF55103	FAD-linked oxidases, C-terminal domain
SHALO_1973	SSF56176	FAD-binding/transporter-associated domain-like
SHALO_1976	SSF48024	N-terminal domain of DnaB helicase
SHALO_1976	SSF51294	Hedgehog/intein (Hint) domain
SHALO_1976	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SHALO_1976	SSF55608	Homing endonucleases
SHALO_1977	SSF51717	Dihydropteroate synthetase-like
SHALO_1977	SSF56014	Nitrite and sulphite reductase 4Fe-4S domain-like
SHALO_1978	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SHALO_1979	SSF54523	Pili subunits
SHALO_1980	SSF54523	Pili subunits
SHALO_1983	SSF46600	C-terminal UvrC-binding domain of UvrB
SHALO_1983	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SHALO_1984	SSF140356	PPK N-terminal domain-like
SHALO_1984	SSF143724	PHP14-like
SHALO_1984	SSF56024	Phospholipase D/nuclease
SHALO_1985	SSF51161	Trimeric LpxA-like enzymes
SHALO_1986	SSF53098	Ribonuclease H-like
SHALO_1987	SSF51366	Ribulose-phoshate binding barrel
SHALO_1988	SSF51366	Ribulose-phoshate binding barrel
SHALO_1989	SSF56266	DmpA/ArgJ-like
SHALO_1991	SSF48150	DNA-glycosylase
SHALO_1992	SSF56300	Metallo-dependent phosphatases
SHALO_1993	SSF141259	CarD-like
SHALO_1993	SSF143517	TRCF domain-like
SHALO_1993	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SHALO_1995	SSF51261	Duplicated hybrid motif
SHALO_1996	SSF53244	MurD-like peptide ligases, peptide-binding domain
SHALO_1996	SSF53623	MurD-like peptide ligases, catalytic domain
SHALO_1997	SSF55073	Nucleotide cyclase
SHALO_1999	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
SHALO_1999	SSF50677	ValRS/IleRS/LeuRS editing domain
SHALO_1999	SSF52374	Nucleotidylyl transferase
SHALO_2000	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
SHALO_2001	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
SHALO_2003	SSF56317	Carbon-nitrogen hydrolase
SHALO_2004	SSF55973	S-adenosylmethionine synthetase
SHALO_2006	SSF55729	Acyl-CoA N-acyltransferases (Nat)
SHALO_2007	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SHALO_2007	SSF81923	Double Clp-N motif
SHALO_2008	SSF54736	ClpS-like
SHALO_2009	SSF52833	Thioredoxin-like
SHALO_2010	SSF74982	Small protein B (SmpB)
SHALO_2011	SSF54211	Ribosomal protein S5 domain 2-like
SHALO_2011	SSF55060	GHMP Kinase, C-terminal domain
SHALO_2012	SSF117130	CsrA-like
SHALO_2013	SSF55120	Pseudouridine synthase
SHALO_2014	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SHALO_2015	SSF46785	"Winged helix" DNA-binding domain
SHALO_2015	SSF53850	Periplasmic binding protein-like II
SHALO_2017	SSF55486	Metalloproteases ("zincins"), catalytic domain
SHALO_2018	SSF56752	D-aminoacid aminotransferase-like PLP-dependent enzymes
SHALO_2019	SSF56322	ADC synthase
SHALO_2020	SSF53671	Aspartate/ornithine carbamoyltransferase
SHALO_2022	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SHALO_2024	SSF46689	Homeodomain-like
SHALO_2024	SSF55136	Probable bacterial effector-binding domain
SHALO_2025	SSF53383	PLP-dependent transferases
SHALO_2028	SSF111321	AF1104-like
SHALO_2029	SSF50104	Translation proteins SH3-like domain
SHALO_2030	SSF75217	alpha/beta knot
SHALO_2031	SSF50346	PRC-barrel domain
SHALO_2031	SSF50447	Translation proteins
SHALO_2033	SSF54565	Ribosomal protein S16
SHALO_2034	SSF47364	Domain of the SRP/SRP receptor G-proteins
SHALO_2034	SSF47446	Signal peptide-binding domain
SHALO_2034	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SHALO_2035	SSF55120	Pseudouridine synthase
SHALO_2036	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
SHALO_2038	SSF102705	NIF3 (NGG1p interacting factor 3)-like
SHALO_2039	SSF55681	Class II aaRS and biotin synthetases
SHALO_2041	SSF52255	N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE)
SHALO_2043	SSF75708	Chemotaxis phosphatase CheZ
SHALO_2044	SSF89550	PHP domain-like
SHALO_2045	SSF54368	Glutamine synthetase, N-terminal domain
SHALO_2045	SSF55931	Glutamine synthetase/guanido kinase
SHALO_2046	SSF53955	Lysozyme-like
SHALO_2046	SSF56601	beta-lactamase/transpeptidase-like
SHALO_2047	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SHALO_2048	SSF53383	PLP-dependent transferases
SHALO_2049	SSF52972	ITPase-like
SHALO_2051	SSF101353	Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS)
SHALO_2051	SSF50447	Translation proteins
SHALO_2051	SSF55186	ThrRS/AlaRS common domain
SHALO_2051	SSF55681	Class II aaRS and biotin synthetases
SHALO_2052	SSF51445	(Trans)glycosidases
SHALO_2053	SSF46894	C-terminal effector domain of the bipartite response regulators
SHALO_2053	SSF52172	CheY-like
SHALO_2054	SSF47384	Homodimeric domain of signal transducing histidine kinase
SHALO_2054	SSF55785	PYP-like sensor domain (PAS domain)
SHALO_2054	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
SHALO_2055	SSF50692	ADC-like
SHALO_2055	SSF53706	Formate dehydrogenase/DMSO reductase, domains 1-3
SHALO_2056	SSF54862	4Fe-4S ferredoxins
SHALO_2058	SSF89155	TorD-like
SHALO_2062	SSF51735	NAD(P)-binding Rossmann-fold domains
SHALO_2064	SSF53800	Chelatase
SHALO_2065	SSF56519	Penicillin binding protein dimerisation domain
SHALO_2065	SSF56601	beta-lactamase/transpeptidase-like
SHALO_2070	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
SHALO_2071	SSF55729	Acyl-CoA N-acyltransferases (Nat)
SHALO_2074	SSF52833	Thioredoxin-like
SHALO_2075	SSF103481	Multidrug resistance efflux transporter EmrE
SHALO_2083	SSF54523	Pili subunits
SHALO_2085	SSF52317	Class I glutamine amidotransferase-like
SHALO_2086	SSF103473	MFS general substrate transporter
SHALO_2087	SSF56801	Acetyl-CoA synthetase-like
SHALO_2087	SSF69593	Glycerol-3-phosphate (1)-acyltransferase
SHALO_2088	SSF46785	"Winged helix" DNA-binding domain
SHALO_2090	SSF51556	Metallo-dependent hydrolases
SHALO_2092	SSF100950	NagB/RpiA/CoA transferase-like
SHALO_2093	SSF51621	Phosphoenolpyruvate/pyruvate domain
SHALO_2095	SSF52374	Nucleotidylyl transferase
SHALO_2095	SSF55729	Acyl-CoA N-acyltransferases (Nat)
SHALO_2098	SSF103190	Sensory domain-like
SHALO_2098	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
SHALO_2098	SSF55890	Sporulation response regulatory protein Spo0B
SHALO_2099	SSF46785	"Winged helix" DNA-binding domain
SHALO_2099	SSF52172	CheY-like
SHALO_2102	SSF53850	Periplasmic binding protein-like II
SHALO_2103	SSF47226	Histidine-containing phosphotransfer domain, HPT domain
SHALO_2103	SSF47384	Homodimeric domain of signal transducing histidine kinase
SHALO_2103	SSF52172	CheY-like
SHALO_2103	SSF53850	Periplasmic binding protein-like II
SHALO_2103	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
SHALO_2104	SSF109604	HD-domain/PDEase-like
SHALO_2104	SSF52172	CheY-like
SHALO_2105	SSF103473	MFS general substrate transporter
SHALO_2106	SSF53271	PRTase-like
SHALO_2108	SSF102114	Radical SAM enzymes
SHALO_2110	SSF141571	Pentapeptide repeat-like
SHALO_2111	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
SHALO_2113	SSF109604	HD-domain/PDEase-like
SHALO_2113	SSF81301	Nucleotidyltransferase
SHALO_2114	SSF53697	SIS domain
SHALO_2114	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
SHALO_2117	SSF55073	Nucleotide cyclase
SHALO_2118	SSF102114	Radical SAM enzymes
SHALO_2119	SSF54197	HIT-like
SHALO_2120	SSF53187	Zn-dependent exopeptidases
SHALO_2121	SSF109604	HD-domain/PDEase-like
SHALO_2121	SSF141868	EAL domain-like
SHALO_2122	SSF52833	Thioredoxin-like
SHALO_2123	SSF116726	TrkA C-terminal domain-like
SHALO_2123	SSF51735	NAD(P)-binding Rossmann-fold domains
SHALO_2123	SSF81324	Voltage-gated potassium channels
SHALO_2124	SSF116726	TrkA C-terminal domain-like
SHALO_2124	SSF51735	NAD(P)-binding Rossmann-fold domains
SHALO_2126	SSF55159	eIF1-like
SHALO_2127	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SHALO_2128	SSF141868	EAL domain-like
SHALO_2128	SSF55073	Nucleotide cyclase
SHALO_2129	SSF54862	4Fe-4S ferredoxins
SHALO_2137	SSF143243	Nqo5-like
SHALO_2137	SSF56762	HydB/Nqo4-like
SHALO_2138	SSF54862	4Fe-4S ferredoxins
SHALO_2139	SSF56770	HydA/Nqo6-like
SHALO_2141	SSF53163	HybD-like
SHALO_2142	SSF51445	(Trans)glycosidases
SHALO_2142	SSF53448	Nucleotide-diphospho-sugar transferases
SHALO_2143	SSF48310	Aldehyde ferredoxin oxidoreductase, C-terminal domains
SHALO_2143	SSF56228	Aldehyde ferredoxin oxidoreductase, N-terminal domain
SHALO_2144	SSF54285	MoaD/ThiS
SHALO_2145	SSF54285	MoaD/ThiS
SHALO_2146	SSF69572	Activating enzymes of the ubiquitin-like proteins
SHALO_2147	SSF55073	Nucleotide cyclase
SHALO_2150	SSF51161	Trimeric LpxA-like enzymes
SHALO_2151	SSF117916	Fe-S cluster assembly (FSCA) domain-like
SHALO_2151	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SHALO_2152	SSF53448	Nucleotide-diphospho-sugar transferases
SHALO_2152	SSF69765	IpsF-like
SHALO_2153	SSF52172	CheY-like
SHALO_2154	SSF52374	Nucleotidylyl transferase
SHALO_2154	SSF88697	PUA domain-like
SHALO_2156	SSF101307	YutG-like
SHALO_2157	SSF101874	YceI-like
SHALO_2158	SSF54211	Ribosomal protein S5 domain 2-like
SHALO_2159	SSF51690	Nicotinate/Quinolinate PRTase C-terminal domain-like
SHALO_2159	SSF54675	Nicotinate/Quinolinate PRTase N-terminal domain-like
SHALO_2160	SSF161098	MetI-like
SHALO_2161	SSF53850	Periplasmic binding protein-like II
SHALO_2162	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SHALO_2163	SSF161098	MetI-like
SHALO_2164	SSF50331	MOP-like
SHALO_2165	SSF53850	Periplasmic binding protein-like II
SHALO_2166	SSF46785	"Winged helix" DNA-binding domain
SHALO_2166	SSF50331	MOP-like
SHALO_2167	SSF56601	beta-lactamase/transpeptidase-like
SHALO_2168	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
SHALO_2168	SSF51735	NAD(P)-binding Rossmann-fold domains
SHALO_2170	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SHALO_2171	SSF111369	HlyD-like secretion proteins
SHALO_2172	SSF56954	Outer membrane efflux proteins (OEP)
SHALO_2175	SSF50182	Sm-like ribonucleoproteins
SHALO_2175	SSF82689	Mechanosensitive channel protein MscS (YggB), C-terminal domain
SHALO_2175	SSF82861	Mechanosensitive channel protein MscS (YggB), transmembrane region
SHALO_2176	SSF51182	RmlC-like cupins
SHALO_2178	SSF55961	Bet v1-like
SHALO_2179	SSF81901	HCP-like
SHALO_2180	SSF46689	Homeodomain-like
SHALO_2180	SSF51215	Regulatory protein AraC
SHALO_2182	SSF47188	Hemerythrin-like
SHALO_2183	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
SHALO_2188	SSF51366	Ribulose-phoshate binding barrel
SHALO_2189	SSF48013	NusB-like
SHALO_2190	SSF52121	Lumazine synthase
SHALO_2192	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
SHALO_2192	SSF56436	C-type lectin-like
SHALO_2193	SSF51569	Aldolase
SHALO_2194	SSF103481	Multidrug resistance efflux transporter EmrE
SHALO_2195	SSF50182	Sm-like ribonucleoproteins
SHALO_2195	SSF82689	Mechanosensitive channel protein MscS (YggB), C-terminal domain
SHALO_2195	SSF82861	Mechanosensitive channel protein MscS (YggB), transmembrane region
SHALO_2196	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SHALO_2197	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SHALO_2198	SSF52374	Nucleotidylyl transferase
SHALO_2199	SSF46589	tRNA-binding arm
SHALO_2199	SSF55681	Class II aaRS and biotin synthetases
SHALO_2200	SSF48452	TPR-like
SHALO_2201	SSF110921	2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain
SHALO_2201	SSF51569	Aldolase
SHALO_2204	SSF140990	FtsH protease domain-like
SHALO_2204	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SHALO_2205	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
SHALO_2206	SSF52172	CheY-like
SHALO_2207	SSF51366	Ribulose-phoshate binding barrel
SHALO_2208	SSF52317	Class I glutamine amidotransferase-like
SHALO_2209	SSF103190	Sensory domain-like
SHALO_2211	SSF51735	NAD(P)-binding Rossmann-fold domains
SHALO_2211	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
SHALO_2214	SSF51735	NAD(P)-binding Rossmann-fold domains
SHALO_2215	SSF51161	Trimeric LpxA-like enzymes
SHALO_2216	SSF53448	Nucleotide-diphospho-sugar transferases
SHALO_2217	SSF51161	Trimeric LpxA-like enzymes
SHALO_2218	SSF53448	Nucleotide-diphospho-sugar transferases
SHALO_2220	SSF53383	PLP-dependent transferases
SHALO_2221	SSF51735	NAD(P)-binding Rossmann-fold domains
SHALO_2222	SSF51735	NAD(P)-binding Rossmann-fold domains
SHALO_2223	SSF51569	Aldolase
SHALO_2223	SSF89000	post-HMGL domain-like
SHALO_2224	SSF51735	NAD(P)-binding Rossmann-fold domains
SHALO_2224	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
SHALO_2225	SSF52467	DHS-like NAD/FAD-binding domain
SHALO_2225	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
SHALO_2226	SSF51735	NAD(P)-binding Rossmann-fold domains
SHALO_2227	SSF53448	Nucleotide-diphospho-sugar transferases
SHALO_2228	SSF51735	NAD(P)-binding Rossmann-fold domains
SHALO_2229	SSF81301	Nucleotidyltransferase
SHALO_2229	SSF81593	Nucleotidyltransferase substrate binding subunit/domain
SHALO_2230	SSF51735	NAD(P)-binding Rossmann-fold domains
SHALO_2231	SSF51182	RmlC-like cupins
SHALO_2231	SSF53448	Nucleotide-diphospho-sugar transferases
SHALO_2232	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
SHALO_2232	SSF51735	NAD(P)-binding Rossmann-fold domains
SHALO_2232	SSF52413	UDP-glucose/GDP-mannose dehydrogenase C-terminal domain
SHALO_2233	SSF50249	Nucleic acid-binding proteins
SHALO_2233	SSF56091	DNA ligase/mRNA capping enzyme, catalytic domain
SHALO_2234	SSF51735	NAD(P)-binding Rossmann-fold domains
SHALO_2235	SSF53448	Nucleotide-diphospho-sugar transferases
SHALO_2236	SSF53738	Phosphoglucomutase, first 3 domains
SHALO_2236	SSF55957	Phosphoglucomutase, C-terminal domain
SHALO_2237	SSF53098	Ribonuclease H-like
SHALO_2241	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
SHALO_2243	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
SHALO_2244	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
SHALO_2245	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
SHALO_2246	SSF53697	SIS domain
SHALO_2247	SSF52374	Nucleotidylyl transferase
SHALO_2247	SSF53613	Ribokinase-like
SHALO_2248	SSF56784	HAD-like
SHALO_2249	SSF48452	TPR-like
SHALO_2250	SSF46626	Cytochrome c
SHALO_2252	SSF55008	HMA, heavy metal-associated domain
SHALO_2252	SSF56784	HAD-like
SHALO_2252	SSF81653	Calcium ATPase, transduction domain A
SHALO_2252	SSF81665	Calcium ATPase, transmembrane domain M
SHALO_2253	SSF141868	EAL domain-like
SHALO_2253	SSF55073	Nucleotide cyclase
SHALO_2254	SSF103481	Multidrug resistance efflux transporter EmrE
SHALO_2255	SSF109604	HD-domain/PDEase-like
SHALO_2256	SSF52833	Thioredoxin-like
SHALO_2258	SSF64438	CNF1/YfiH-like putative cysteine hydrolases
SHALO_2259	SSF63380	Riboflavin synthase domain-like
SHALO_2260	SSF103190	Sensory domain-like
SHALO_2260	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
SHALO_2261	SSF50891	Cyclophilin-like
SHALO_2262	SSF160467	PH0987 N-terminal domain-like
SHALO_2262	SSF50891	Cyclophilin-like
SHALO_2263	SSF88713	Glycoside hydrolase/deacetylase
SHALO_2267	SSF52172	CheY-like
SHALO_2268	SSF47384	Homodimeric domain of signal transducing histidine kinase
SHALO_2268	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
SHALO_2269	SSF51905	FAD/NAD(P)-binding domain
SHALO_2270	SSF50022	ISP domain
SHALO_2271	SSF81342	Transmembrane di-heme cytochromes
SHALO_2271	SSF81648	a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
SHALO_2272	SSF46626	Cytochrome c
SHALO_2274	SSF52096	ClpP/crotonase
SHALO_2275	SSF53901	Thiolase-like
SHALO_2276	SSF47336	ACP-like
SHALO_2277	SSF51735	NAD(P)-binding Rossmann-fold domains
SHALO_2278	SSF53649	Alkaline phosphatase-like
SHALO_2278	SSF64158	2,3-Bisphosphoglycerate-independent phosphoglycerate mutase, substrate-binding domain
SHALO_2280	SSF53244	MurD-like peptide ligases, peptide-binding domain
SHALO_2280	SSF53623	MurD-like peptide ligases, catalytic domain
SHALO_2283	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SHALO_2284	SSF46689	Homeodomain-like
SHALO_2284	SSF53098	Ribonuclease H-like
SHALO_2286	SSF51735	NAD(P)-binding Rossmann-fold domains
SHALO_2287	SSF51735	NAD(P)-binding Rossmann-fold domains
SHALO_2288	SSF51182	RmlC-like cupins
SHALO_2289	SSF53448	Nucleotide-diphospho-sugar transferases
SHALO_2290	SSF51735	NAD(P)-binding Rossmann-fold domains
SHALO_2291	SSF50692	ADC-like
SHALO_2291	SSF53706	Formate dehydrogenase/DMSO reductase, domains 1-3
SHALO_2293	SSF54862	4Fe-4S ferredoxins
SHALO_2294	SSF47384	Homodimeric domain of signal transducing histidine kinase
SHALO_2294	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
SHALO_2295	SSF46894	C-terminal effector domain of the bipartite response regulators
SHALO_2295	SSF52172	CheY-like
SHALO_2298	SSF141868	EAL domain-like
SHALO_2298	SSF54631	CBS-domain pair
SHALO_2298	SSF55073	Nucleotide cyclase
SHALO_2300	SSF53850	Periplasmic binding protein-like II
SHALO_2302	SSF51246	Rudiment single hybrid motif
SHALO_2302	SSF52440	PreATP-grasp domain
SHALO_2302	SSF56059	Glutathione synthetase ATP-binding domain-like
SHALO_2306	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SHALO_2310	SSF103481	Multidrug resistance efflux transporter EmrE
SHALO_2311	SSF51246	Rudiment single hybrid motif
SHALO_2311	SSF52440	PreATP-grasp domain
SHALO_2311	SSF56059	Glutathione synthetase ATP-binding domain-like
SHALO_2312	SSF81340	Clc chloride channel
SHALO_2314	SSF56796	Dehydroquinate synthase-like
SHALO_2315	SSF54001	Cysteine proteinases
SHALO_2316	SSF142906	YjbR-like
SHALO_2317	SSF48150	DNA-glycosylase
SHALO_2318	SSF55729	Acyl-CoA N-acyltransferases (Nat)
SHALO_2319	SSF53850	Periplasmic binding protein-like II
SHALO_2320	SSF103088	OmpA-like
SHALO_2320	SSF103647	TSP type-3 repeat
SHALO_2320	SSF56925	OMPA-like
SHALO_2321	SSF50182	Sm-like ribonucleoproteins
SHALO_2321	SSF82689	Mechanosensitive channel protein MscS (YggB), C-terminal domain
SHALO_2321	SSF82861	Mechanosensitive channel protein MscS (YggB), transmembrane region
SHALO_2323	SSF56784	HAD-like
SHALO_2324	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
SHALO_2324	SSF52922	TK C-terminal domain-like
SHALO_2324	SSF53323	Pyruvate-ferredoxin oxidoreductase, PFOR, domain III
SHALO_2324	SSF54862	4Fe-4S ferredoxins
SHALO_2325	SSF46609	Fe,Mn superoxide dismutase (SOD), N-terminal domain
SHALO_2325	SSF54719	Fe,Mn superoxide dismutase (SOD), C-terminal domain
SHALO_2330	SSF63411	LuxS/MPP-like metallohydrolase
SHALO_2331	SSF118215	Proton glutamate symport protein
SHALO_2332	SSF50475	FMN-binding split barrel
SHALO_2333	SSF52821	Rhodanese/Cell cycle control phosphatase
SHALO_2334	SSF47188	Hemerythrin-like
SHALO_2335	SSF111369	HlyD-like secretion proteins
SHALO_2336	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
SHALO_2336	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
SHALO_2336	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
SHALO_2337	SSF56954	Outer membrane efflux proteins (OEP)
SHALO_2338	SSF103473	MFS general substrate transporter
SHALO_2339	SSF103473	MFS general substrate transporter
SHALO_2340	SSF46689	Homeodomain-like
SHALO_2342	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SHALO_2342	SSF88723	PIN domain-like
SHALO_2343	SSF56300	Metallo-dependent phosphatases
SHALO_2344	SSF52151	FabD/lysophospholipase-like
SHALO_2345	SSF101386	all-alpha NTP pyrophosphatases
SHALO_2346	SSF55620	Tetrahydrobiopterin biosynthesis enzymes-like
SHALO_2347	SSF102114	Radical SAM enzymes
SHALO_2348	SSF52402	Adenine nucleotide alpha hydrolases-like
SHALO_2349	SSF47384	Homodimeric domain of signal transducing histidine kinase
SHALO_2349	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
SHALO_2350	SSF52218	Flavoproteins
SHALO_2351	SSF46785	"Winged helix" DNA-binding domain
SHALO_2352	SSF51182	RmlC-like cupins
SHALO_2354	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
SHALO_2355	SSF47384	Homodimeric domain of signal transducing histidine kinase
SHALO_2355	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
SHALO_2356	SSF52172	CheY-like
SHALO_2357	SSF109755	PhoU-like
SHALO_2358	SSF55729	Acyl-CoA N-acyltransferases (Nat)
SHALO_2358	SSF69593	Glycerol-3-phosphate (1)-acyltransferase
SHALO_2359	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SHALO_2360	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
SHALO_2361	SSF53213	LigB-like
SHALO_2362	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
SHALO_2363	SSF53850	Periplasmic binding protein-like II
SHALO_2364	SSF161098	MetI-like
SHALO_2365	SSF161098	MetI-like
SHALO_2366	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SHALO_2368	SSF46894	C-terminal effector domain of the bipartite response regulators
SHALO_2369	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
SHALO_2371	SSF48695	Multiheme cytochromes
SHALO_2372	SSF48695	Multiheme cytochromes
SHALO_2373	SSF51905	FAD/NAD(P)-binding domain
SHALO_2373	SSF56425	Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
SHALO_2375	SSF47413	lambda repressor-like DNA-binding domains
SHALO_2377	SSF54211	Ribosomal protein S5 domain 2-like
SHALO_2378	SSF52161	Ribosomal protein L13
SHALO_2379	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SHALO_2379	SSF52980	Restriction endonuclease-like
SHALO_2380	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SHALO_2380	SSF52980	Restriction endonuclease-like
SHALO_2384	SSF46626	Cytochrome c
SHALO_2386	SSF46626	Cytochrome c
SHALO_2387	SSF81442	Cytochrome c oxidase subunit I-like
SHALO_2388	SSF52172	CheY-like
SHALO_2389	SSF47384	Homodimeric domain of signal transducing histidine kinase
SHALO_2389	SSF55785	PYP-like sensor domain (PAS domain)
SHALO_2389	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
SHALO_2391	SSF52021	Carbamoyl phosphate synthetase, small subunit N-terminal domain
SHALO_2391	SSF52317	Class I glutamine amidotransferase-like
SHALO_2393	SSF158791	MgtE N-terminal domain-like
SHALO_2395	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SHALO_2396	SSF55681	Class II aaRS and biotin synthetases
SHALO_2397	SSF53383	PLP-dependent transferases
SHALO_2398	SSF103190	Sensory domain-like
SHALO_2398	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
SHALO_2399	SSF103190	Sensory domain-like
SHALO_2399	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
SHALO_2400	SSF56784	HAD-like
SHALO_2401	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
SHALO_2401	SSF52922	TK C-terminal domain-like
SHALO_2402	SSF48576	Terpenoid synthases
SHALO_2403	SSF50156	PDZ domain-like
SHALO_2404	SSF82607	YbaB-like
SHALO_2405	SSF50692	ADC-like
SHALO_2406	SSF53244	MurD-like peptide ligases, peptide-binding domain
SHALO_2406	SSF53623	MurD-like peptide ligases, catalytic domain
SHALO_2407	SSF48452	TPR-like
SHALO_2408	SSF117916	Fe-S cluster assembly (FSCA) domain-like
SHALO_2409	SSF64263	Prokaryotic ribosomal protein L17
SHALO_2410	SSF47789	C-terminal domain of RNA polymerase alpha subunit
SHALO_2410	SSF55257	RBP11-like subunits of RNA polymerase
SHALO_2410	SSF56553	Insert subdomain of RNA polymerase alpha subunit
SHALO_2411	SSF55174	Alpha-L RNA-binding motif
SHALO_2412	SSF53137	Translational machinery components
SHALO_2413	SSF46946	S13-like H2TH domain
SHALO_2414	SSF57840	Ribosomal protein L36
SHALO_2415	SSF50249	Nucleic acid-binding proteins
SHALO_2416	SSF55920	Creatinase/aminopeptidase
SHALO_2417	SSF103491	Preprotein translocase SecY subunit
SHALO_2418	SSF52080	Ribosomal proteins L15p and L18e
SHALO_2419	SSF54211	Ribosomal protein S5 domain 2-like
SHALO_2419	SSF54768	dsRNA-binding domain-like
SHALO_2420	SSF53137	Translational machinery components
SHALO_2421	SSF56053	Ribosomal protein L6
SHALO_2422	SSF56047	Ribosomal protein S8
SHALO_2423	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)
SHALO_2424	SSF55282	RL5-like
SHALO_2425	SSF50104	Translation proteins SH3-like domain
SHALO_2426	SSF50193	Ribosomal protein L14
SHALO_2427	SSF50249	Nucleic acid-binding proteins
SHALO_2428	SSF46561	Ribosomal protein L29 (L29p)
SHALO_2429	SSF54686	Ribosomal protein L16p/L10e
SHALO_2430	SSF54814	Prokaryotic type KH domain (KH-domain type II)
SHALO_2430	SSF54821	Ribosomal protein S3 C-terminal domain
SHALO_2431	SSF54843	Ribosomal protein L22
SHALO_2432	SSF54570	Ribosomal protein S19
SHALO_2433	SSF50104	Translation proteins SH3-like domain
SHALO_2433	SSF50249	Nucleic acid-binding proteins
SHALO_2434	SSF54189	Ribosomal proteins S24e, L23 and L15e
SHALO_2435	SSF52166	Ribosomal protein L4
SHALO_2436	SSF50447	Translation proteins
SHALO_2437	SSF54999	Ribosomal protein S10
SHALO_2440	SSF53098	Ribonuclease H-like
SHALO_2446	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SHALO_2447	SSF52833	Thioredoxin-like
SHALO_2448	SSF52833	Thioredoxin-like
SHALO_2449	SSF50037	C-terminal domain of transcriptional repressors
SHALO_2450	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SHALO_2451	SSF103263	Chorismate synthase, AroC
SHALO_2452	SSF54768	dsRNA-binding domain-like
SHALO_2452	SSF69065	RNase III domain-like
SHALO_2453	SSF53098	Ribonuclease H-like
SHALO_2454	SSF48452	TPR-like
SHALO_2455	SSF56731	DNA primase core
SHALO_2455	SSF57783	Zinc beta-ribbon
SHALO_2456	SSF52402	Adenine nucleotide alpha hydrolases-like
SHALO_2457	SSF52172	CheY-like
SHALO_2458	SSF103039	CheC-like
SHALO_2459	SSF55073	Nucleotide cyclase
SHALO_2459	SSF55785	PYP-like sensor domain (PAS domain)
SHALO_2460	SSF52172	CheY-like
SHALO_2461	SSF47384	Homodimeric domain of signal transducing histidine kinase
SHALO_2461	SSF55785	PYP-like sensor domain (PAS domain)
SHALO_2461	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
SHALO_2462	SSF52172	CheY-like
SHALO_2462	SSF52738	Methylesterase CheB, C-terminal domain
SHALO_2463	SSF64438	CNF1/YfiH-like putative cysteine hydrolases
SHALO_2464	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
SHALO_2465	SSF47757	Chemotaxis receptor methyltransferase CheR, N-terminal domain
SHALO_2465	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
SHALO_2466	SSF47226	Histidine-containing phosphotransfer domain, HPT domain
SHALO_2466	SSF47384	Homodimeric domain of signal transducing histidine kinase
SHALO_2466	SSF50341	CheW-like
SHALO_2466	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
SHALO_2468	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
SHALO_2469	SSF50341	CheW-like
SHALO_2470	SSF52172	CheY-like
SHALO_2471	SSF46565	Chaperone J-domain
SHALO_2473	SSF50800	PK beta-barrel domain-like
SHALO_2474	SSF75169	DsrEFH-like
SHALO_2475	SSF55816	5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain
SHALO_2475	SSF56300	Metallo-dependent phosphatases
SHALO_2477	SSF46626	Cytochrome c
SHALO_2478	SSF81296	E set domains
SHALO_2480	SSF46626	Cytochrome c
SHALO_2481	SSF46626	Cytochrome c
SHALO_2482	SSF56524	Oxidoreductase molybdopterin-binding domain
SHALO_2482	SSF81296	E set domains
SHALO_2483	SSF53474	alpha/beta-Hydrolases
SHALO_2484	SSF141571	Pentapeptide repeat-like
SHALO_2485	SSF52833	Thioredoxin-like
SHALO_2487	SSF109604	HD-domain/PDEase-like
SHALO_2488	SSF54001	Cysteine proteinases
SHALO_2495	SSF88697	PUA domain-like
SHALO_2496	SSF55729	Acyl-CoA N-acyltransferases (Nat)
SHALO_2500	SSF117892	Band 7/SPFH domain
SHALO_2501	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SHALO_2504	SSF56784	HAD-like
SHALO_2504	SSF81653	Calcium ATPase, transduction domain A
SHALO_2508	SSF47240	Ferritin-like
SHALO_2510	SSF46785	"Winged helix" DNA-binding domain
SHALO_2511	SSF56935	Porins
SHALO_2515	SSF56935	Porins
SHALO_2516	SSF46894	C-terminal effector domain of the bipartite response regulators
SHALO_2516	SSF52172	CheY-like
SHALO_2517	SSF158472	HAMP domain-like
SHALO_2517	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
SHALO_2519	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SHALO_2520	SSF50037	C-terminal domain of transcriptional repressors
SHALO_2522	SSF56935	Porins
SHALO_2524	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
SHALO_2524	SSF88946	Sigma2 domain of RNA polymerase sigma factors
SHALO_2525	SSF53474	alpha/beta-Hydrolases
SHALO_2525	SSF81296	E set domains
SHALO_2526	SSF56935	Porins
SHALO_2527	SSF74653	TolA/TonB C-terminal domain
SHALO_2530	SSF160240	Cation efflux protein cytoplasmic domain-like
SHALO_2530	SSF161111	Cation efflux protein transmembrane domain-like
SHALO_2532	SSF103473	MFS general substrate transporter
SHALO_2533	SSF103473	MFS general substrate transporter
SHALO_2534	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SHALO_2534	SSF90123	ABC transporter transmembrane region
SHALO_2535	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SHALO_2535	SSF90123	ABC transporter transmembrane region
SHALO_2536	SSF56935	Porins
SHALO_2537	SSF56935	Porins
SHALO_2538	SSF46689	Homeodomain-like
SHALO_2539	SSF46689	Homeodomain-like
SHALO_2540	SSF55073	Nucleotide cyclase
SHALO_2542	SSF141868	EAL domain-like
SHALO_2544	SSF53850	Periplasmic binding protein-like II
SHALO_2545	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SHALO_2546	SSF161098	MetI-like
SHALO_2547	SSF161098	MetI-like
SHALO_2548	SSF56784	HAD-like
SHALO_2549	SSF103481	Multidrug resistance efflux transporter EmrE
SHALO_2554	SSF52218	Flavoproteins
SHALO_2557	SSF51735	NAD(P)-binding Rossmann-fold domains
SHALO_2558	SSF160387	NosL/MerB-like
SHALO_2560	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SHALO_2564	SSF52833	Thioredoxin-like
SHALO_2565	SSF55073	Nucleotide cyclase
SHALO_2565	SSF55785	PYP-like sensor domain (PAS domain)
SHALO_2566	SSF103481	Multidrug resistance efflux transporter EmrE
SHALO_2567	SSF52172	CheY-like
SHALO_2568	SSF47384	Homodimeric domain of signal transducing histidine kinase
SHALO_2568	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
SHALO_2569	SSF53649	Alkaline phosphatase-like
SHALO_2570	SSF52141	Uracil-DNA glycosylase-like
SHALO_2571	SSF103190	Sensory domain-like
SHALO_2571	SSF141868	EAL domain-like
SHALO_2572	SSF47598	Ribbon-helix-helix
SHALO_2573	SSF143011	RelE-like
SHALO_2574	SSF47384	Homodimeric domain of signal transducing histidine kinase
SHALO_2574	SSF55785	PYP-like sensor domain (PAS domain)
SHALO_2574	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
SHALO_2575	SSF47384	Homodimeric domain of signal transducing histidine kinase
SHALO_2575	SSF55785	PYP-like sensor domain (PAS domain)
SHALO_2575	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
SHALO_2576	SSF52172	CheY-like
SHALO_2577	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
SHALO_2578	SSF53146	Nitrogenase accessory factor-like
SHALO_2579	SSF53146	Nitrogenase accessory factor-like
SHALO_2581	SSF51604	Enolase C-terminal domain-like
SHALO_2581	SSF54826	Enolase N-terminal domain-like
SHALO_2582	SSF53850	Periplasmic binding protein-like II
SHALO_2583	SSF161098	MetI-like
SHALO_2584	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SHALO_2587	SSF53067	Actin-like ATPase domain
SHALO_2589	SSF143120	YefM-like
SHALO_2590	SSF143011	RelE-like
SHALO_2592	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SHALO_2592	SSF90123	ABC transporter transmembrane region
SHALO_2593	SSF51120	beta-Roll
SHALO_2595	SSF48452	TPR-like
SHALO_2595	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
SHALO_2596	SSF56954	Outer membrane efflux proteins (OEP)
SHALO_2599	SSF53807	"Helical backbone" metal receptor
SHALO_2600	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
SHALO_2601	SSF56935	Porins
SHALO_2602	SSF48557	L-aspartase-like
SHALO_2603	SSF48557	L-aspartase-like
SHALO_2605	SSF53774	Glutaminase/Asparaginase
SHALO_2606	SSF47384	Homodimeric domain of signal transducing histidine kinase
SHALO_2606	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
SHALO_2607	SSF46894	C-terminal effector domain of the bipartite response regulators
SHALO_2607	SSF52172	CheY-like
SHALO_2608	SSF53955	Lysozyme-like
SHALO_2609	SSF53850	Periplasmic binding protein-like II
SHALO_2610	SSF161098	MetI-like
SHALO_2613	SSF140931	Fic-like
SHALO_2613	SSF46785	"Winged helix" DNA-binding domain
SHALO_2616	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SHALO_2619	SSF160387	NosL/MerB-like
SHALO_2620	SSF81901	HCP-like
SHALO_2623	SSF54862	4Fe-4S ferredoxins
SHALO_2624	SSF54534	FKBP-like
SHALO_2625	SSF48695	Multiheme cytochromes
SHALO_2626	SSF47384	Homodimeric domain of signal transducing histidine kinase
SHALO_2626	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
SHALO_2627	SSF46894	C-terminal effector domain of the bipartite response regulators
SHALO_2627	SSF52172	CheY-like
SHALO_2628	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
SHALO_2630	SSF46785	"Winged helix" DNA-binding domain
SHALO_2631	SSF52218	Flavoproteins
SHALO_2632	SSF100879	Lesion bypass DNA polymerase (Y-family), little finger domain
SHALO_2632	SSF56672	DNA/RNA polymerases
SHALO_2635	SSF56935	Porins
SHALO_2636	SSF74653	TolA/TonB C-terminal domain
SHALO_2639	SSF55326	PurM N-terminal domain-like
SHALO_2639	SSF56042	PurM C-terminal domain-like
SHALO_2640	SSF64307	SirA-like
SHALO_2640	SSF75169	DsrEFH-like
SHALO_2642	SSF53850	Periplasmic binding protein-like II
SHALO_2644	SSF55073	Nucleotide cyclase
SHALO_2644	SSF55785	PYP-like sensor domain (PAS domain)
SHALO_2645	SSF46785	"Winged helix" DNA-binding domain
SHALO_2646	SSF103473	MFS general substrate transporter
SHALO_2650	SSF50331	MOP-like
SHALO_2650	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SHALO_2651	SSF161098	MetI-like
SHALO_2652	SSF53850	Periplasmic binding protein-like II
SHALO_2653	SSF46785	"Winged helix" DNA-binding domain
SHALO_2654	SSF53927	Cytidine deaminase-like
SHALO_2655	SSF81342	Transmembrane di-heme cytochromes
SHALO_2656	SSF54862	4Fe-4S ferredoxins
SHALO_2659	SSF89155	TorD-like
SHALO_2660	SSF56935	Porins
SHALO_2661	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SHALO_2662	SSF81345	ABC transporter involved in vitamin B12 uptake, BtuC
SHALO_2663	SSF53807	"Helical backbone" metal receptor
SHALO_2664	SSF51679	Bacterial luciferase-like
SHALO_2665	SSF46458	Globin-like
SHALO_2666	SSF74653	TolA/TonB C-terminal domain
SHALO_2669	SSF46785	"Winged helix" DNA-binding domain
SHALO_2669	SSF50331	MOP-like
SHALO_2670	SSF46458	Globin-like
SHALO_2671	SSF56935	Porins
SHALO_2672	SSF53807	"Helical backbone" metal receptor
SHALO_2673	SSF102114	Radical SAM enzymes
SHALO_2673	SSF53807	"Helical backbone" metal receptor
SHALO_2674	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
SHALO_2675	SSF50331	MOP-like
SHALO_2677	SSF54913	GlnB-like
SHALO_2678	SSF46689	Homeodomain-like
SHALO_2678	SSF51215	Regulatory protein AraC
SHALO_2679	SSF56935	Porins
SHALO_2680	SSF101874	YceI-like
SHALO_2681	SSF46689	Homeodomain-like
SHALO_2681	SSF51215	Regulatory protein AraC
SHALO_2682	SSF81342	Transmembrane di-heme cytochromes
SHALO_2683	SSF54862	4Fe-4S ferredoxins
SHALO_2686	SSF89155	TorD-like
SHALO_2687	SSF54862	4Fe-4S ferredoxins
SHALO_2688	SSF53822	Periplasmic binding protein-like I
SHALO_2689	SSF47384	Homodimeric domain of signal transducing histidine kinase
SHALO_2689	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
SHALO_2690	SSF52172	CheY-like
SHALO_2691	SSF53383	PLP-dependent transferases
SHALO_2692	SSF46785	"Winged helix" DNA-binding domain
SHALO_2692	SSF50447	Translation proteins
SHALO_2692	SSF50465	EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
SHALO_2692	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SHALO_2694	SSF46548	alpha-helical ferredoxin
SHALO_2694	SSF54292	2Fe-2S ferredoxin-like
SHALO_2695	SSF46977	Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain
SHALO_2695	SSF51905	FAD/NAD(P)-binding domain
SHALO_2695	SSF56425	Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
SHALO_2697	SSF46785	"Winged helix" DNA-binding domain
SHALO_2698	SSF101874	YceI-like
SHALO_2699	SSF51182	RmlC-like cupins
SHALO_2701	SSF52980	Restriction endonuclease-like
SHALO_2702	SSF109604	HD-domain/PDEase-like
SHALO_2704	SSF52833	Thioredoxin-like
SHALO_2705	SSF55785	PYP-like sensor domain (PAS domain)
SHALO_2706	SSF46894	C-terminal effector domain of the bipartite response regulators
SHALO_2706	SSF52172	CheY-like
SHALO_2707	SSF158472	HAMP domain-like
SHALO_2707	SSF47384	Homodimeric domain of signal transducing histidine kinase
SHALO_2707	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
SHALO_2708	SSF52317	Class I glutamine amidotransferase-like
SHALO_2709	SSF46785	"Winged helix" DNA-binding domain
SHALO_2709	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
SHALO_2710	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
SHALO_2711	SSF53448	Nucleotide-diphospho-sugar transferases
SHALO_2713	SSF48557	L-aspartase-like
SHALO_2714	SSF51735	NAD(P)-binding Rossmann-fold domains
SHALO_2717	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
SHALO_2718	SSF56801	Acetyl-CoA synthetase-like
SHALO_2721	SSF53474	alpha/beta-Hydrolases
SHALO_2722	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
SHALO_2724	SSF53901	Thiolase-like
SHALO_2725	SSF47336	ACP-like
SHALO_2726	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SHALO_2731	SSF55008	HMA, heavy metal-associated domain
SHALO_2733	SSF54001	Cysteine proteinases
SHALO_2735	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
SHALO_2736	SSF52172	CheY-like
SHALO_2738	SSF75304	Amidase signature (AS) enzymes
SHALO_2739	SSF160467	PH0987 N-terminal domain-like
SHALO_2739	SSF50891	Cyclophilin-like
SHALO_2739	SSF51230	Single hybrid motif
SHALO_2739	SSF51246	Rudiment single hybrid motif
SHALO_2739	SSF52440	PreATP-grasp domain
SHALO_2739	SSF56059	Glutathione synthetase ATP-binding domain-like
SHALO_2742	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SHALO_2743	SSF161098	MetI-like
SHALO_2744	SSF53850	Periplasmic binding protein-like II
SHALO_2745	SSF47384	Homodimeric domain of signal transducing histidine kinase
SHALO_2745	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
SHALO_2746	SSF46894	C-terminal effector domain of the bipartite response regulators
SHALO_2746	SSF52172	CheY-like
SHALO_2747	SSF47473	EF-hand
SHALO_2748	SSF56935	Porins
SHALO_2750	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
SHALO_2750	SSF88946	Sigma2 domain of RNA polymerase sigma factors
SHALO_2751	SSF52172	CheY-like
SHALO_2752	SSF47384	Homodimeric domain of signal transducing histidine kinase
SHALO_2752	SSF52402	Adenine nucleotide alpha hydrolases-like
SHALO_2752	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SHALO_2752	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
SHALO_2754	SSF56784	HAD-like
SHALO_2754	SSF81653	Calcium ATPase, transduction domain A
SHALO_2754	SSF81665	Calcium ATPase, transmembrane domain M
SHALO_2756	SSF51735	NAD(P)-binding Rossmann-fold domains
SHALO_2757	SSF50621	Alanine racemase C-terminal domain-like
SHALO_2757	SSF51419	PLP-binding barrel
SHALO_2758	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
SHALO_2759	SSF51735	NAD(P)-binding Rossmann-fold domains
SHALO_2760	SSF75169	DsrEFH-like
SHALO_2761	SSF51735	NAD(P)-binding Rossmann-fold domains
SHALO_2762	SSF52972	ITPase-like
SHALO_2763	SSF50685	Barwin-like endoglucanases
SHALO_2765	SSF103473	MFS general substrate transporter
SHALO_2767	SSF101744	Rof/RNase P subunit-like
SHALO_2768	SSF141523	L,D-transpeptidase catalytic domain-like
SHALO_2770	SSF53218	Molybdenum cofactor biosynthesis proteins
SHALO_2770	SSF63867	MoeA C-terminal domain-like
SHALO_2770	SSF63882	MoeA N-terminal region -like
SHALO_2771	SSF54690	Molybdopterin synthase subunit MoaE
SHALO_2772	SSF54285	MoaD/ThiS
SHALO_2773	SSF117916	Fe-S cluster assembly (FSCA) domain-like
SHALO_2773	SSF82649	SufE/NifU
SHALO_2774	SSF53383	PLP-dependent transferases
SHALO_2775	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SHALO_2776	SSF55620	Tetrahydrobiopterin biosynthesis enzymes-like
SHALO_2777	SSF102735	Trigger factor ribosome-binding domain
SHALO_2777	SSF109998	Triger factor/SurA peptide-binding domain-like
SHALO_2777	SSF54534	FKBP-like
SHALO_2778	SSF52096	ClpP/crotonase
SHALO_2779	SSF55073	Nucleotide cyclase
SHALO_2780	SSF56420	Peptide deformylase
SHALO_2781	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SHALO_2781	SSF54211	Ribosomal protein S5 domain 2-like
SHALO_2782	SSF53613	Ribokinase-like
SHALO_2782	SSF64153	YjeF N-terminal domain-like
SHALO_2783	SSF53328	Formyltransferase
SHALO_2784	SSF110399	ThiG-like
SHALO_2791	SSF46689	Homeodomain-like
SHALO_2792	SSF54862	4Fe-4S ferredoxins
SHALO_2793	SSF54862	4Fe-4S ferredoxins
SHALO_2794	SSF54862	4Fe-4S ferredoxins
SHALO_2795	SSF89155	TorD-like
SHALO_2797	SSF54862	4Fe-4S ferredoxins
SHALO_2798	SSF50692	ADC-like
SHALO_2798	SSF53706	Formate dehydrogenase/DMSO reductase, domains 1-3
SHALO_2800	SSF46689	Homeodomain-like
SHALO_2801	SSF46689	Homeodomain-like
SHALO_2802	SSF46894	C-terminal effector domain of the bipartite response regulators
SHALO_2802	SSF52172	CheY-like
SHALO_2803	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
SHALO_2804	SSF52309	N-(deoxy)ribosyltransferase-like
SHALO_2805	SSF53720	ALDH-like
SHALO_2808	SSF51735	NAD(P)-binding Rossmann-fold domains
SHALO_2808	SSF52283	Formate/glycerate dehydrogenase catalytic domain-like
SHALO_2812	SSF103473	MFS general substrate transporter
SHALO_2813	SSF158832	Tex N-terminal region-like
SHALO_2813	SSF47781	RuvA domain 2-like
SHALO_2813	SSF50249	Nucleic acid-binding proteins
SHALO_2813	SSF53098	Ribonuclease H-like
SHALO_2816	SSF55469	FMN-dependent nitroreductase-like
SHALO_2817	SSF54909	Dimeric alpha+beta barrel
SHALO_2819	SSF51735	NAD(P)-binding Rossmann-fold domains
SHALO_2819	SSF52283	Formate/glycerate dehydrogenase catalytic domain-like
SHALO_2823	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SHALO_2824	SSF111369	HlyD-like secretion proteins
SHALO_2825	SSF46689	Homeodomain-like
SHALO_2825	SSF48498	Tetracyclin repressor-like, C-terminal domain
SHALO_2826	SSF81301	Nucleotidyltransferase
SHALO_2829	SSF48695	Multiheme cytochromes
SHALO_2830	SSF48695	Multiheme cytochromes
SHALO_2831	SSF51905	FAD/NAD(P)-binding domain
SHALO_2831	SSF56425	Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
SHALO_2834	SSF55469	FMN-dependent nitroreductase-like
SHALO_2836	SSF55729	Acyl-CoA N-acyltransferases (Nat)
SHALO_2837	SSF52218	Flavoproteins
SHALO_2839	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
SHALO_2839	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
SHALO_2839	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
SHALO_2840	SSF111369	HlyD-like secretion proteins
SHALO_2841	SSF56954	Outer membrane efflux proteins (OEP)
SHALO_2843	SSF49503	Cupredoxins
SHALO_2844	SSF52172	CheY-like
SHALO_2845	SSF47384	Homodimeric domain of signal transducing histidine kinase
SHALO_2845	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
SHALO_2846	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SHALO_2847	SSF161098	MetI-like
SHALO_2848	SSF53850	Periplasmic binding protein-like II
SHALO_2849	SSF49329	Cu,Zn superoxide dismutase-like
SHALO_2851	SSF52402	Adenine nucleotide alpha hydrolases-like
SHALO_2852	SSF52402	Adenine nucleotide alpha hydrolases-like
SHALO_2853	SSF50447	Translation proteins
SHALO_2853	SSF50465	EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
SHALO_2853	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SHALO_2854	SSF54285	MoaD/ThiS
SHALO_2855	SSF69572	Activating enzymes of the ubiquitin-like proteins
SHALO_2856	SSF102712	JAB1/MPN domain
SHALO_2857	SSF55124	Nitrite/Sulfite reductase N-terminal domain-like
SHALO_2857	SSF56014	Nitrite and sulphite reductase 4Fe-4S domain-like
SHALO_2857	SSF64307	SirA-like
SHALO_2858	SSF51735	NAD(P)-binding Rossmann-fold domains
SHALO_2858	SSF53790	Tetrapyrrole methylase
SHALO_2858	SSF75615	Siroheme synthase middle domains-like
SHALO_2859	SSF53383	PLP-dependent transferases
SHALO_2861	SSF52402	Adenine nucleotide alpha hydrolases-like
SHALO_2863	SSF49344	CBD9-like
SHALO_2864	SSF52172	CheY-like
SHALO_2865	SSF47384	Homodimeric domain of signal transducing histidine kinase
SHALO_2865	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
SHALO_2866	SSF48695	Multiheme cytochromes
SHALO_2867	SSF55073	Nucleotide cyclase
SHALO_2868	SSF52833	Thioredoxin-like
SHALO_2869	SSF52821	Rhodanese/Cell cycle control phosphatase
SHALO_2871	SSF52833	Thioredoxin-like
SHALO_2873	SSF52788	Phosphotyrosine protein phosphatases I
SHALO_2875	SSF52788	Phosphotyrosine protein phosphatases I
SHALO_2876	SSF50022	ISP domain
SHALO_2877	SSF50692	ADC-like
SHALO_2877	SSF53706	Formate dehydrogenase/DMSO reductase, domains 1-3
SHALO_2881	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SHALO_2882	SSF52172	CheY-like
SHALO_2882	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SHALO_2883	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
SHALO_2884	SSF53850	Periplasmic binding protein-like II
SHALO_2886	SSF50692	ADC-like
SHALO_2886	SSF53706	Formate dehydrogenase/DMSO reductase, domains 1-3
SHALO_2887	SSF54862	4Fe-4S ferredoxins
SHALO_2888	SSF53850	Periplasmic binding protein-like II
SHALO_2889	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
SHALO_2890	SSF53067	Actin-like ATPase domain
SHALO_2892	SSF53850	Periplasmic binding protein-like II
SHALO_2893	SSF51735	NAD(P)-binding Rossmann-fold domains
SHALO_2893	SSF53223	Aminoacid dehydrogenase-like, N-terminal domain
SHALO_2894	SSF53271	PRTase-like
SHALO_2895	SSF51735	NAD(P)-binding Rossmann-fold domains
SHALO_2895	SSF53223	Aminoacid dehydrogenase-like, N-terminal domain
SHALO_2896	SSF48163	An anticodon-binding domain of class I aminoacyl-tRNA synthetases
SHALO_2896	SSF52374	Nucleotidylyl transferase
SHALO_2897	SSF109998	Triger factor/SurA peptide-binding domain-like
SHALO_2898	SSF51246	Rudiment single hybrid motif
SHALO_2898	SSF52440	PreATP-grasp domain
SHALO_2898	SSF56059	Glutathione synthetase ATP-binding domain-like
SHALO_2899	SSF51230	Single hybrid motif
SHALO_2900	SSF51283	dUTPase-like
SHALO_2901	SSF55729	Acyl-CoA N-acyltransferases (Nat)
SHALO_2903	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
SHALO_2903	SSF88697	PUA domain-like
SHALO_2904	SSF53474	alpha/beta-Hydrolases
SHALO_2905	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
SHALO_2906	SSF64518	Phase 1 flagellin
SHALO_2907	SSF51735	NAD(P)-binding Rossmann-fold domains
SHALO_2908	SSF53383	PLP-dependent transferases
SHALO_2909	SSF53448	Nucleotide-diphospho-sugar transferases
SHALO_2911	SSF55729	Acyl-CoA N-acyltransferases (Nat)
SHALO_2912	SSF51269	AFP III-like domain
SHALO_2912	SSF51569	Aldolase
SHALO_2913	SSF51735	NAD(P)-binding Rossmann-fold domains
SHALO_2914	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
SHALO_2915	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
SHALO_2916	SSF52402	Adenine nucleotide alpha hydrolases-like
SHALO_2916	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
SHALO_2917	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
SHALO_2918	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
SHALO_2919	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
SHALO_2920	SSF158997	Trm112p-like
SHALO_2920	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
SHALO_2921	SSF51735	NAD(P)-binding Rossmann-fold domains
SHALO_2922	SSF102114	Radical SAM enzymes
SHALO_2922	SSF55729	Acyl-CoA N-acyltransferases (Nat)
SHALO_2923	SSF102114	Radical SAM enzymes
SHALO_2926	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
SHALO_2928	SSF64518	Phase 1 flagellin
SHALO_2929	SSF56712	Prokaryotic type I DNA topoisomerase
SHALO_2929	SSF57783	Zinc beta-ribbon
SHALO_2930	SSF102114	Radical SAM enzymes
SHALO_2931	SSF48256	Citrate synthase
SHALO_2934	SSF51604	Enolase C-terminal domain-like
SHALO_2934	SSF54826	Enolase N-terminal domain-like
SHALO_2935	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SHALO_2935	SSF54752	RecA protein, C-terminal domain
SHALO_2936	SSF53850	Periplasmic binding protein-like II
SHALO_2938	SSF56176	FAD-binding/transporter-associated domain-like
SHALO_2938	SSF56194	Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase, MurB, C-terminal domain
SHALO_2939	SSF53067	Actin-like ATPase domain
SHALO_2941	SSF141868	EAL domain-like
SHALO_2941	SSF55073	Nucleotide cyclase
SHALO_2941	SSF55785	PYP-like sensor domain (PAS domain)
SHALO_2943	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
SHALO_2945	SSF56300	Metallo-dependent phosphatases
SHALO_2948	SSF51735	NAD(P)-binding Rossmann-fold domains
SHALO_2948	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
SHALO_2948	SSF69055	1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain
SHALO_2952	SSF110738	Glycerate kinase I
SHALO_2953	SSF46767	Methylated DNA-protein cysteine methyltransferase, C-terminal domain
SHALO_2953	SSF53155	Methylated DNA-protein cysteine methyltransferase domain
SHALO_2954	SSF55729	Acyl-CoA N-acyltransferases (Nat)
SHALO_2955	SSF110857	Gamma-glutamyl cyclotransferase-like
SHALO_2956	SSF48403	Ankyrin repeat
SHALO_2957	SSF56634	Heme-dependent catalase-like
SHALO_2958	SSF46785	"Winged helix" DNA-binding domain
SHALO_2958	SSF51206	cAMP-binding domain-like
SHALO_2960	SSF53732	Aconitase iron-sulfur domain
SHALO_2961	SSF53448	Nucleotide-diphospho-sugar transferases
SHALO_2962	SSF141868	EAL domain-like
SHALO_2962	SSF55073	Nucleotide cyclase
SHALO_2963	SSF160387	NosL/MerB-like
SHALO_2964	SSF54909	Dimeric alpha+beta barrel
SHALO_2965	SSF103481	Multidrug resistance efflux transporter EmrE
SHALO_2966	SSF56931	Outer membrane phospholipase A (OMPLA)
SHALO_2966	SSF81901	HCP-like
SHALO_2967	SSF54928	RNA-binding domain, RBD
SHALO_2968	SSF55040	Molybdenum cofactor biosynthesis protein C, MoaC
SHALO_2969	SSF117991	YbeD/HP0495-like
SHALO_2970	SSF47162	Apolipoprotein
SHALO_2973	SSF54862	4Fe-4S ferredoxins
SHALO_2974	SSF89155	TorD-like
SHALO_2976	SSF46626	Cytochrome c
SHALO_2977	SSF54862	4Fe-4S ferredoxins
SHALO_2978	SSF50692	ADC-like
SHALO_2978	SSF53706	Formate dehydrogenase/DMSO reductase, domains 1-3
SHALO_2979	SSF52821	Rhodanese/Cell cycle control phosphatase
SHALO_2981	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SHALO_2991	SSF52821	Rhodanese/Cell cycle control phosphatase
SHALO_2993	SSF54862	4Fe-4S ferredoxins
SHALO_2994	SSF50692	ADC-like
SHALO_2994	SSF53706	Formate dehydrogenase/DMSO reductase, domains 1-3
SHALO_2996	SSF46785	"Winged helix" DNA-binding domain
SHALO_2996	SSF53850	Periplasmic binding protein-like II
SHALO_2998	SSF52821	Rhodanese/Cell cycle control phosphatase
SHALO_3000	SSF54862	4Fe-4S ferredoxins
SHALO_3001	SSF50692	ADC-like
SHALO_3001	SSF53706	Formate dehydrogenase/DMSO reductase, domains 1-3
SHALO_3002	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
SHALO_3003	SSF55073	Nucleotide cyclase
SHALO_3004	SSF109604	HD-domain/PDEase-like
SHALO_3004	SSF55781	GAF domain-like
SHALO_3004	SSF56281	Metallo-hydrolase/oxidoreductase
SHALO_3006	SSF88713	Glycoside hydrolase/deacetylase
SHALO_3007	SSF55194	Ribosome recycling factor, RRF
SHALO_3008	SSF53271	PRTase-like
SHALO_3010	SSF103473	MFS general substrate transporter
SHALO_3013	SSF140478	LemA-like
SHALO_3014	SSF50447	Translation proteins
SHALO_3014	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SHALO_3014	SSF54980	EF-G C-terminal domain-like
SHALO_3017	SSF117143	Flagellar hook protein flgE
SHALO_3018	SSF117143	Flagellar hook protein flgE
SHALO_3020	SSF143880	NE0471 N-terminal domain-like
SHALO_3021	SSF69796	Thymidylate synthase-complementing protein Thy1
SHALO_3022	SSF53098	Ribonuclease H-like